RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AGAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000157985

Ensembl transcript IDs: ENST00000304032.13, ENST00000336665.9, ENST00000402604.6, ENST00000409457.5, ENST00000409538.5, ENST00000428334.6, ENST00000453371.2, ENST00000482882.1, ENST00000614409.4, ENST00000619456.4

Found 1232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGCGGCTGCCCAGCTTGGGCGTCCCAAGGTCGGATGCCACAGCTaGCTGCTGGTCTCACCTAGCAGCCTTAGGCCTGAGCTCTGGGGC +
Preference number: 1 (lower is better)
Translates to: GAAAQLGRPKVGCHS*LLVSPSSLRPELWG
Trigger: GCCCCAGAGCTCAGGCCTAAGGCTGCTAGGTGAGACCAGCAGGCAGCTGTGGCATCCGACCTTGGGACGCCCAAGCTGGGCAGCCGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp GAGGATGGGGAGAGAGGGACGGGCCTGCAGCCAAGCACGGCGACCTaGGGTGCTCTCCAGCAAGCTCCGATCTCAGACAGGAGGAGGAGG +
Preference number: 1 (lower is better)
Translates to: EDGERGTGLQPSTAT*GALQQAPISDRRRR
Trigger: CCTCCTCCTCCTGTCTGAGATCGGAGCTTGCTGGAGAGCACCCCAGGTCGCCGTGCTTGGCTGCAGGCCCGTCCCTCTCTCCCCATCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 90 bp CGGCTGCCCAGCTTGGGCGTCCCAAGGTCGGATGCCACAGCTGCCTaGTGGTCTCACCTAGCAGCCTTAGGCCTGAGCTCTGGGGCTTTC +
Preference number: 1 (lower is better)
Translates to: RLPSLGVPRSDATAA*WSHLAALGLSSGAF
Trigger: GAAAGCCCCAGAGCTCAGGCCTAAGGCTGCTAGGTGAGACCAGCAGGCAGCTGTGGCATCCGACCTTGGGACGCCCAAGCTGGGCAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 90 bp CCGATCTCAGACAGGAGGAGGAGGGGAGCACCAAGCAAGGCCCAGTaGACGCGTGAGTCACAGCGGCTCATGGCAACGGCAAGGGGGCAT +
Preference number: 1 (lower is better)
Translates to: PISDRRRRGAPSKAQ*TRESQRLMATARGH
Trigger: ATGCCCCCTTGCCGTTGCCATGAGCCGCTGTGACTCACGCGTGCACTGGGCCTTGCTTGGTGCTCCCCTCCTCCTCCTGTCTGAGATCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 90 bp ACCAAATTCCAAGCTGGCAGAAGGGAAGAGCCAGTGCAGGAGACCTaGCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGGCTGAGCTCA +
Preference number: 1 (lower is better)
Translates to: TKFQAGRREEPVQET*PRDPCDPPLSRLSS
Trigger: TGAGCTCAGCCTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTCCCTTCTGCCAGCTTGGAATTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp GAGCACCAAGCAAGGCCCAGTGCACGCGTGAGTCACAGCGGCTCATaGCAACGGCAAGGGGGCATCTTAAGGGAGGGGCGCTGTCCACGT +
Preference number: 1 (lower is better)
Translates to: EHQARPSARVSHSGS*QRQGGILREGRCPR
Trigger: ACGTGGACAGCGCCCCTCCCTTAAGATGCCCCCTTGCCGTTGCCATGAGCCGCTGTGACTCACGCGTGCACTGGGCCTTGCTTGGTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 90 bp GCACCTCAACAGGCTGTGGGGGAGAGGGAAGGGTCGTCTTGGCCCTaGTCAGCACCAGCGAACAGCACGAGGGCAGAACTCAGCCCCTTC +
Preference number: 1 (lower is better)
Translates to: APQQAVGEREGSSWP*SAPANSTRAELSPF
Trigger: GAAGGGGCTGAGTTCTGCCCTCGTGCTGTTCGCTGGTGCTGATCAGGGCCAAGACGACCCTTCCCTCTCCCCCACAGCCTGTTGAGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp TCCGCGAAGCTGAACGCGGGGGTGCAGATGTGTCCAGATCACCCATaGGGTTACACAGGCCGCTCGTGGGCCTCCCTCAGCTGGCTGTTT +
Preference number: 1 (lower is better)
Translates to: SAKLNAGVQMCPDHP*GYTGRSWASLSWLF
Trigger: AAACAGCCAGCTGAGGGAGGCCCACGAGCGGCCTGTGTAACCCCATGGGTGATCTGGACACATCTGCACCCCCGCGTTCAGCTTCGCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 90 bp CTGCCCGTCCCAGCACCTGAGGTCAGAATCACAGAGTACTGTCCCTaGGGGGTGTTTCTGCTGCAGCCAGGTCTGCACCACACCCCTCCA +
Preference number: 1 (lower is better)
Translates to: LPVPAPEVRITEYCP*GVFLLQPGLHHTPP
Trigger: TGGAGGGGTGTGGTGCAGACCTGGCTGCAGCAGAAACACCCCGCAGGGACAGTACTCTGTGATTCTGACCTCAGGTGCTGGGACGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp CACAGCTGCCTGCTGGTCTCACCTAGCAGCCTTAGGCCTGAGCTCTaGGGCTTTCAGAGCCCATGCAAGTCTCTGCTGGCCACTCTGGCC +
Preference number: 1 (lower is better)
Translates to: HSCLLVSPSSLRPEL*GFQSPCKSLLATLA
Trigger: GGCCAGAGTGGCCAGCAGAGACTTGCATGGGCTCTGAAAGCCCCAGAGCTCAGGCCTAAGGCTGCTAGGTGAGACCAGCAGGCAGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp TCATTTCCAGAACATCCTAAGTGCAGGGAGGGAGAGTTGGTGTCCTaGGCGCCACGGGGACCTAGAGCGCCTACGGCACATTGGAGGCTG +
Preference number: 1 (lower is better)
Translates to: SFPEHPKCREGELVS*APRGPRAPTAHWRL
Trigger: CAGCCTCCAATGTGCCGTAGGCGCTCTAGGTCCCCGTGGCGCCCAGGACACCAACTCTCCCTCCCTGCACTTAGGATGTTCTGGAAATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 90 bp GCCCCATCTGCCCACCTCCAGGCCCTGAGGCCCATCTGTAGAGGGTaGGGACCTCAGACAAGAACAGTTCTACCCAACAGGTGCAAAACC +
Preference number: 1 (lower is better)
Translates to: APSAHLQALRPICRG*GPQTRTVLPNRCKT
Trigger: GGTTTTGCACCTGTTGGGTAGAACTGTTCTTGTCTGAGGTCCTCACCCTCTACAGATGGGCCTCAGGGCCTGGAGGTGGGCAGATGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 90 bp GGATTCCATGCACCTGGACTGTCCTTCCTCAAGTCCAAAGGCCCCTaGCATCCTCATGCCCAGCTGCTGACCGAGTGGGCTTCCAGTGTC +
Preference number: 1 (lower is better)
Translates to: GFHAPGLSFLKSKGP*HPHAQLLTEWASSV
Trigger: GACACTGGAAGCCCACTCGGTCAGCAGCTGGGCATGAGGATGTCAGGGGCCTTTGGACTTGAGGAAGGACAGTCCAGGTGCATGGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 90 bp TCTCAACGACCTTGTGCAGGCGGTGAGGGACGGAAGCAGAGCACATaGCGTGCCGGGAGGTTTGGGGTTTGCTTTCCAAACACCTTTGCC +
Preference number: 1 (lower is better)
Translates to: SQRPCAGGEGRKQST*RAGRFGVCFPNTFA
Trigger: GGCAAAGGTGTTTGGAAAGCAAACCCCAAACCTCCCGGCACGGCATGTGCTCTGCTTCCGTCCCTCACCGCCTGCACAAGGTCGTTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp TTAGGAAACGCACCCCTGTGGCAAGATGAGAACCAAATTCCAAGCTaGCAGAAGGGAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCC +
Preference number: 1 (lower is better)
Translates to: LGNAPLWQDENQIPS*QKGRASAGDLPPGP
Trigger: GGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTCCCTTCTGCCAGCTTGGAATTTGGTTCTCATCTTGCCACAGGGGTGCGTTTCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 90 bp GAGCTGCTCCGGCTGCCCTTTAGGAAACGCACCCCTGTGGCAAGATaGGAACCAAATTCCAAGCTGGCAGAAGGGAAGAGCCAGTGCAGG +
Preference number: 1 (lower is better)
Translates to: ELLRLPFRKRTPVAR*EPNSKLAEGKSQCR
Trigger: CCTGCACTGGCTCTTCCCTTCTGCCAGCTTGGAATTTGGTTCTCATCTTGCCACAGGGGTGCGTTTCCTAAAGGGCAGCCGGAGCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 90 bp GGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATaGACCTGGACTGTCCTTCCTCAAGTCCAAAGGCCCCTGACATCC +
Preference number: 1 (lower is better)
Translates to: GWAASSVCMRPIRIP*TWTVLPQVQRPLTS
Trigger: GGATGTCAGGGGCCTTTGGACTTGAGGAAGGACAGTCCAGGTGCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 90 bp TGGCTCACTCCCAACACCCTTGGAGCCTTCTCTGTTCTCCTACCCTaGGAACCCAGGCAGGAAATGCATTTGCCCAGGGACCTCCAGGAA +
Preference number: 1 (lower is better)
Translates to: WLTPNTLGAFSVLLP*EPRQEMHLPRDLQE
Trigger: TTCCTGGAGGTCCCTGGGCAAATGCATTTCCTGCCTGGGTTCTCAGGGTAGGAGAACAGAGAAGGCTCCAAGGGTGTTGGGAGTGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 90 bp TTGGGGCCAGTGACTCAGGAACTTGTCACTTGCTCACCCTCGAGCTaGTCATTTCCTGGGATGAAACAGAGAGAGGGACCAGGGACCAGG +
Preference number: 1 (lower is better)
Translates to: LGPVTQELVTCSPSS*SFPGMKQREGPGTR
Trigger: CCTGGTCCCTGGTCCCTCTCTCTGTTTCATCCCAGGAAATGAGCAGCTCGAGGGTGAGCAAGTGACAAGTTCCTGAGTCACTGGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 90 bp TGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCTAAGTaGAGGGAGGGAGAGTTGGTGTCCTGGGCGCCACGGGGACCTAGA +
Preference number: 1 (lower is better)
Translates to: WGRNVDFLSFPEHPK*REGELVSWAPRGPR
Trigger: TCTAGGTCCCCGTGGCGCCCAGGACACCAACTCTCCCTCCCTGCACTTAGGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 90 bp ACAGACAGCGCAGCATCCCAGGGGCCAGCGATCCAGTTCACTCTCTaGCTGTGTCGGAAGGACCAGTCTGAGGACTGTTTCTTAGTGATC +
Preference number: 1 (lower is better)
Translates to: TDSAASQGPAIQFTL*LCRKDQSEDCFLVI
Trigger: GATCACTAAGAAACAGTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCCCTGGGATGCTGCGCTGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 90 bp ACCTGGACTGTCCTTCCTCAAGTCCAAAGGCCCCTGACATCCTCATaGCCAGCTGCTGACCGAGTGGGCTTCCAGTGTCTTCTGTTTACC +
Preference number: 1 (lower is better)
Translates to: TWTVLPQVQRPLTSS*PAADRVGFQCLLFT
Trigger: GGTAAACAGAAGACACTGGAAGCCCACTCGGTCAGCAGCTGGGCATGAGGATGTCAGGGGCCTTTGGACTTGAGGAAGGACAGTCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp GACTCAGGAACTTGTCACTTGCTCACCCTCGAGCTGCTCATTTCCTaGGATGAAACAGAGAGAGGGACCAGGGACCAGGACTGGGGTGCT +
Preference number: 1 (lower is better)
Translates to: DSGTCHLLTLELLIS*DETERGTRDQDWGA
Trigger: AGCACCCCAGTCCTGGTCCCTGGTCCCTCTCTCTGTTTCATCCCAGGAAATGAGCAGCTCGAGGGTGAGCAAGTGACAAGTTCCTGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp CGCCTACGGCACATTGGAGGCTGCAGGTTGAGCAGGCCACTCTTGTaGGGTAAGATGAGTCCACCAAGTTCAAGCACAAAACACGCTGGG +
Preference number: 1 (lower is better)
Translates to: RLRHIGGCRLSRPLL*GKMSPPSSSTKHAG
Trigger: CCCAGCGTGTTTTGTGCTTGAACTTGGTGGACTCATCTTACCCCACAAGAGTGGCCTGCTCAACCTGCAGCCTCCAATGTGCCGTAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp ATTTCCTCTCATTTCCAGAACATCCTAAGTGCAGGGAGGGAGAGTTaGTGTCCTGGGCGCCACGGGGACCTAGAGCGCCTACGGCACATT +
Preference number: 1 (lower is better)
Translates to: ISSHFQNILSAGRES*CPGRHGDLERLRHI
Trigger: AATGTGCCGTAGGCGCTCTAGGTCCCCGTGGCGCCCAGGACACCAACTCTCCCTCCCTGCACTTAGGATGTTCTGGAAATGAGAGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 90 bp AGGTTGGGGGAGTGCTCCCTACAGGTACCCTGTGCCAGGCCAAAATaGAAACCAAGCCCTGAGCCAGCCTCTCCTCACATTCATGAGGAT +
Preference number: 1 (lower is better)
Translates to: RLGECSLQVPCARPK*KPSPEPASPHIHED
Trigger: ATCCTCATGAATGTGAGGAGAGGCTGGCTCAGGGCTTGGTTTTCATTTTGGCCTGGCACAGGGTACCTGTAGGGAGCACTCCCCCAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 90 bp CCTTCCTCAAGTCCAAAGGCCCCTGACATCCTCATGCCCAGCTGCTaGCCGAGTGGGCTTCCAGTGTCTTCTGTTTACCAAAGCTCTCCA +
Preference number: 1 (lower is better)
Translates to: PSSSPKAPDILMPSC*PSGLPVSSVYQSSP
Trigger: TGGAGAGCTTTGGTAAACAGAAGACACTGGAAGCCCACTCGGTCAGCAGCTGGGCATGAGGATGTCAGGGGCCTTTGGACTTGAGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp TCTACACTGGATGACGAGGCCGGAACCATGCAGGCCTCATCAGGCTaGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTG +
Preference number: 1 (lower is better)
Translates to: STLDDEAGTMQASSG*VKSQKRELQCKALV
Trigger: CACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCCGGCCTCGTCATCCAGTGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp GCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCACCTaGACTGTCCTTCCTCAAGTCCAAAGGCCCCTGACATCCTCATGC +
Preference number: 1 (lower is better)
Translates to: AASSVCMRPIRIPCT*TVLPQVQRPLTSSC
Trigger: GCATGAGGATGTCAGGGGCCTTTGGACTTGAGGAAGGACAGTCCAGGTGCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 90 bp GTGACCCGCTGCCTTCTCCCTCCTTTCCAGTGCATATATACATTGTaGACACACTTGGGAGACAGGACACTGCACCTGGTTTTGGGGCCA +
Preference number: 1 (lower is better)
Translates to: VTRCLLPPFQCIYTL*THLGDRTLHLVLGP
Trigger: TGGCCCCAAAACCAGGTGCAGTGTCCTGTCTCCCAAGTGTGTGCACAATGTATATATGCACTGGAAAGGAGGGAGAAGGCAGCGGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 90 bp CAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTGAAAAGCCACTaGCGAGAACTGGCCTGTGCACTAGAGGCTCTGCAGGAAATGCAA +
Preference number: 1 (lower is better)
Translates to: QKRELQCKALVLKSH*RELACALEALQEMQ
Trigger: TTGCATTTCCTGCAGAGCCTCTAGTGCACAGGCCAGTTCTCGGCAGTGGCTTTTCAGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 90 bp GCAAGTTTCACAGATGAGGAAAAAGAGCCCAGGAAGCTGGGTGCTTaGCTAGAGTTGCAGAGGAATCCTCTGGAAGGATGGCAGGGCCAG +
Preference number: 1 (lower is better)
Translates to: ASFTDEEKEPRKLGA*LELQRNPLEGWQGQ
Trigger: CTGGCCCTGCCATCCTTCCAGAGGATTCCTCTGCAACTCTAGGCAAGCACCCAGCTTCCTGGGCTCTTTTTCCTCATCTGTGAAACTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp GAAGCTACATCGTTGCCAGGCTTCCCACCTCCTGGGGCAGGAATGTaGATTTCCTCTCATTTCCAGAACATCCTAAGTGCAGGGAGGGAG +
Preference number: 1 (lower is better)
Translates to: EATSLPGFPPPGAGM*ISSHFQNILSAGRE
Trigger: CTCCCTCCCTGCACTTAGGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGCCTGGCAACGATGTAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp CCGCATCTCAGGGGAAGCTACATCGTTGCCAGGCTTCCCACCTCCTaGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCTAAG +
Preference number: 1 (lower is better)
Translates to: PHLRGSYIVARLPTS*GRNVDFLSFPEHPK
Trigger: CTTAGGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGCCTGGCAACGATGTAGCTTCCCCTGAGATGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 90 bp AAGATCCCGCTCTCTCCTGTGTCTGAGAACCCTGCGATTGGCGAGTaGCCCGCTGCCTTCTCCCTCCTTTCCAGTGCATATATACATTGT +
Preference number: 1 (lower is better)
Translates to: KIPLSPVSENPAIGE*PAAFSLLSSAYIHC
Trigger: ACAATGTATATATGCACTGGAAAGGAGGGAGAAGGCAGCGGGTCACTCGCCAATCGCAGGGTTCTCAGACACAGGAGAGAGCGGGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 90 bp GCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTaGGGACTGTTTCTTAGTGATCCAGCTCCAAGGTGTACTCTAAGG +
Preference number: 1 (lower is better)
Translates to: ASDPVHSLPVSEGPV*GLFLSDPAPRCTLR
Trigger: CCTTAGAGTACACCTTGGAGCTGGATCACTAAGAAACAGTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 90 bp ACACTGCACCTGGTTTTGGGGCCAGTGACTCAGGAACTTGTCACTTaGTCACCCTCGAGCTGCTCATTTCCTGGGATGAAACAGAGAGAG +
Preference number: 1 (lower is better)
Translates to: TLHLVLGPVTQELVT*SPSSCSFPGMKQRE
Trigger: CTCTCTCTGTTTCATCCCAGGAAATGAGCAGCTCGAGGGTGAGCAAGTGACAAGTTCCTGAGTCACTGGCCCCAAAACCAGGTGCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 90 bp GTTTGGGGTTTGCTTTCCAAACACCTTTGCCTCCTGAGTAGTTGCTaGGGCCTGATCATACCGCATCTCAGGGGAAGCTACATCGTTGCC +
Preference number: 1 (lower is better)
Translates to: VWGLLSKHLCLLSSC*GLIIPHLRGSYIVA
Trigger: GGCAACGATGTAGCTTCCCCTGAGATGCGGTATGATCAGGCCTCAGCAACTACTCAGGAGGCAAAGGTGTTTGGAAAGCAAACCCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 90 bp CAGAAATCCAAGCGCAAGCCGCGGAAAGGTGGAGAATGCACGCATTaGTGCCAAAGGCCCTTATTTAGCTTTTTGGGGAAGGATGAGGGT +
Preference number: 1 (lower is better)
Translates to: QKSKRKPRKGGECTH*CQRPLFSFLGKDEG
Trigger: ACCCTCATCCTTCCCCAAAAAGCTAAATAAGGGCCTTTGGCATCAATGCGTGCATTCTCCACCTTTCCGCGGCTTGCGCTTGGATTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp ACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTTaGGGGAGTGCTCCCTACAGGTACCCTGTGCCAGGCCAAAATGAA +
Preference number: 1 (lower is better)
Translates to: TSTRSLYHMVSPSSG*GSAPYRYPVPGQNE
Trigger: TTCATTTTGGCCTGGCACAGGGTACCTGTAGGGAGCACTCCCCCAACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp TCTAGATCAGTCCGATGTGGACTTCGACAAGGAGTCTCTATCATATaGTTTCACCATCCTCAGGTTGGGGGAGTGCTCCCTACAGGTACC +
Preference number: 1 (lower is better)
Translates to: SRSVRCGLRQGVSII*FHHPQVGGVLPTGT
Trigger: GGTACCTGTAGGGAGCACTCCCCCAACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGGACTGATCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp TTCGAAAGACCCTCAAAAACTGCCTTTCCTTCTGCTACCAAAACTTaGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACT +
Preference number: 1 (lower is better)
Translates to: FERPSKTAFPSATKT*ALESGCGVEQMDIT
Trigger: AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGTAGCAGAAGGAAAGGCAGTTTTTGAGGGTCTTTCGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp AGTGTTTCTGTTATTAACAAGTGCTCCTGTTCTCCCAGCATCCCCTaGGCCAGGTGTGAGGCCAACACTTATCACACTGGTTTGAAACCT +
Preference number: 1 (lower is better)
Translates to: SVSVINKCSCSPSIP*ARCEANTYHTGLKP
Trigger: AGGTTTCAAACCAGTGTGATAAGTGTTGGCCTCACACCTGGCCCAGGGGATGCTGGGAGAACAGGAGCACTTGTTAATAACAGAAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp ATACACTGCTATTTACAGAAACAGAAAACTGGCTGCAAGGTGGGTTaGCCTTCCCTGCCCCTGCCTAGAAATGCATCTCAGTTGTCACCT +
Preference number: 1 (lower is better)
Translates to: IHCYLQKQKTGCKVG*PSLPLPRNASQLSP
Trigger: AGGTGACAACTGAGATGCATTTCTAGGCAGGGGCAGGGAAGGCCAACCCACCTTGCAGCCAGTTTTCTGTTTCTGTAAATAGCAGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 90 bp TTTCTTAGTGATCCAGCTCCAAGGTGTACTCTAAGGAGATACACCTaGGCCCCTTCTCTCTCCTGCATAATGGGAGGAAAGCTGACATTT +
Preference number: 1 (lower is better)
Translates to: FLSDPAPRCTLRRYT*APSLSCIMGGKLTF
Trigger: AAATGTCAGCTTTCCTCCCATTATGCAGGAGAGAGAAGGGGCGCAGGTGTATCTCCTTAGAGTACACCTTGGAGCTGGATCACTAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTaGCTTCTGCACCTGTTATACTTTTGGATACGAGTGAGCTCCACT +
Preference number: 1 (lower is better)
Translates to: SNGRTMELSSRFSDL*LLHLLYFWIRVSST
Trigger: AGTGGAGCTCACTCGTATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR TCA 90 bp GCCTCTAGAAAATCAACCTCAGACTACAAAGCAGAATATACATGTTaGGAAAAGTGGGCAGGTTCCAGAGAGGCTCTCAGGGAGCAAGGA +
Preference number: 1 (lower is better)
Translates to: ASRKSTSDYKAEYTC*EKWAGSREALREQG
Trigger: TCCTTGCTCCCTGAGAGCCTCTCTGGAACCTGCCCACTTTTCTCAACATGTATATTCTGCTTTGTAGTCTGAGGTTGATTTTCTAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp TACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATaGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGT +
Preference number: 1 (lower is better)
Translates to: YTVMKRRLKNQMAGR*NCRQGSQTCGFCTC
Trigger: ACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR TCA 90 bp ACAATTTCATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTaGAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAA +
Preference number: 1 (lower is better)
Translates to: TISFMLYLCPLQSLR*RLCGASVSSGLEHQ
Trigger: TTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAATGAAATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp GTGGAGAATGCACGCATTGATGCCAAAGGCCCTTATTTAGCTTTTTaGGGAAGGATGAGGGTGACAGTCATTCAAGATGTGACTTCACAA +
Preference number: 1 (lower is better)
Translates to: VENARIDAKGPYLAF*GRMRVTVIQDVTSQ
Trigger: TTGTGAAGTCACATCTTGAATGACTGTCACCCTCATCCTTCCCCAAAAAGCTAAATAAGGGCCTTTGGCATCAATGCGTGCATTCTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTaGGTGTTTACTACACTGGTGAACTTAAATACTTTCTCATACAAC +
Preference number: 1 (lower is better)
Translates to: KNGFSDLGLLTAALG*VFTTLVNLNTFSYN
Trigger: GTTGTATGAGAAAGTATTTAAGTTCACCAGTGTAGTAAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 90 bp TCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATACGAGTaGGCTCCACTTAGCTTCGTTAAGATTAGAAATTTCCATGAAACA +
Preference number: 1 (lower is better)
Translates to: SQTCGFCTCYTFGYE*APLSFVKIRNFHET
Trigger: TGTTTCATGGAAATTTCTAATCTTAACGAAGCTAAGTGGAGCTCACTCGTATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCTGGGGTGAGAGTGGGTaGGCGGGAGGGAGGTGGCCA +
Preference number: 2 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSWGESG*AGGRWP
Trigger: TGGCCACCTCCCTCCCGCCCACCCACTCTCACCCCA...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGGGGGCTGGGTTGGGATaGGGGAGGTCCCTCGTGCCA +
Preference number: 2 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQGAGLG*GRSLVP
Trigger: TGGCACGAGGGACCTCCCCCATCCCAACCCAGCCCC...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCGGGGGAGGTCCCTCGTaGCAACCTGAGCAGTGCGTG +
Preference number: 2 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSGGGPS*QPEQCV
Trigger: CACGCACTGCTCAGGTTGGCACGAGGGACCTCCCCC...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGCGGCTGCCCAGCTTaGGCGTCCCAAGGTCGGATG +
Preference number: 2 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSSGCPA*ASQGRM
Trigger: CATCCGACCTTGGGACGCCCAAGCTGGGCAGCCGCT...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCTCCCTCGTGCCAACCTaGGCAGTGCGTGAGACCCAC +
Preference number: 2 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSSLVPT*AVRETH
Trigger: GTGGGTCTCACGCACTGCTCAGGTTGGCACGAGGGA...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGGAACACCCCGGAGGCTaGCGGTGCGTGTGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQEHPGG*RCVWLH
Trigger: ATGAAGCCACACGCACCGGCAGCCTCCGGGGTGTTC...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCCCTGCGGGGTGTTTCTaGTGCAGCCAGGTCTGCACC +
Preference number: 2 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSPAGCF*CSQVCT
Trigger: GGTGCAGACCTGGCTGCAGCAGAAACACCCCGCAGG...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGCACGGCGACCTGGGGTaGTCTCCAGCAAGCTCCGAT +
Preference number: 2 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQHGDLG*SPASSD
Trigger: ATCGGAGCTTGCTGGAGAGCACCCCAGGTCGCCGTG...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCCCTGTTTGGGGCACATaGAGCGGCTGCCCAGCTTGG +
Preference number: 2 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSPVWGT*SGCPAW
Trigger: CCAAGCTGGGCAGCCGCTCCATGTGCCCCAAACAGG...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCGCAGAGCACATGCCGTaGCGGGAGGTTTGGGGTTTG +
Preference number: 2 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSAEHMP*REVWGL
Trigger: CAAACCCCAAACCTCCCGGCACGGCATGTGCTCTGC...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGGCGCCTACGGCACATTaGAGGCTGCAGGTTGAGCAG +
Preference number: 2 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQAPTAH*RLQVEQ
Trigger: CTGCTCAACCTGCAGCCTCCAATGTGCCGTAGGCGC...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCGCGCCTACGGCACATTaGAGGCTGCAGGTTGAGCAG +
Preference number: 2 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSAPTAH*RLQVEQ
Trigger: CTGCTCAACCTGCAGCCTCCAATGTGCCGTAGGCGC...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGTATTGGGCAGGGGGCTaGGCTGCTTCCAGTGTCTGC +
Preference number: 2 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQYWAGG*AASSVC
Trigger: GCAGACACTGGAAGCAGCCCAGCCCCCTGCCCAATA...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGGCCCGTCCCAGCACCTaGGGTCAGAATCACAGAGTA +
Preference number: 2 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQARPST*GQNHRV
Trigger: TACTCTGTGATTCTGACCTCAGGTGCTGGGACGGGC...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGGAGCAAGGACCTCATTaGTGCTGTTCCCCGCCATGT +
Preference number: 2 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQEQGPH*CCSPPC
Trigger: ACATGGCGGGGAACAGCATCAATGAGGTCCTTGCTC...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCGGCTTTCAGAGCCCATaGAAGTCTCTGCTGGCCACT +
Preference number: 2 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSGFQSP*KSLLAT
Trigger: AGTGGCCAGCAGAGACTTGCATGGGCTCTGAAAGCC...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCTTGGGCCCTAGAAAGTaGCTGCGGAGTGGAGCAGAT +
Preference number: 2 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSLGPRK*LRSGAD
Trigger: ATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAA...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGGGGGGTTTGCTCCACTaGGAAGATTCCCCAACACAC +
Preference number: 2 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQGGLLH*EDSPTH
Trigger: GTGTGTTGGGGAATCTTCCCAGTGGAGCAAACCCCC...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCCTCCTGAGTAGTTGCTaGGGCCTGATCATACCGCAT +
Preference number: 2 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSLLSSC*GLIIPH
Trigger: ATGCGGTATGATCAGGCCTCAGCAACTACTCAGGAG...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGCCCATCTGTAGAGGGTaGGGACCTCAGACAAGAACA +
Preference number: 2 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQPICRG*GPQTRT
Trigger: TGTTCTTGTCTGAGGTCCTCACCCTCTACAGATGGG...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCAGGGCACTGGCAAGCTaGGAGAGGAGGGTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCRALAS*ERRVLG
Trigger: GCCCAGGACCCTCCTCTCTCAGCTTGCCAGTGCCCT...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCCCTCCTCGGCTAATATaGTTTCTTCTCGGCGATGAC +
Preference number: 2 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSPPRLI*FLLGDD
Trigger: GTCATCGCCGAGAAGAAAGCATATTAGCCGAGGAGG...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCGCAATCACCGGCGCGTaGCGCGTGACTACCTCCTCG +
Preference number: 2 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCAITGA*RVTTSS
Trigger: CGAGGAGGTAGTCACGCGGCACGCGCCGGTGATTGC...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGAGGAAGCTGGGTGCTTaGCTAGAGTTGCAGAGGAAT +
Preference number: 2 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQRKLGA*LELQRN
Trigger: ATTCCTCTGCAACTCTAGGCAAGCACCCAGCTTCCT...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGAGAATCACCTGCCAATaGGGACATGTGACGCGAAGA +
Preference number: 2 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQRITCQ*GHVTRR
Trigger: TCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCT...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGCCTACAGGTACCCTGTaGCAGGCCAAAATGAAAACC +
Preference number: 2 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQPTGTL*QAKMKT
Trigger: GGTTTTCATTTTGGCCTGGCACAGGGTACCTGTAGG...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACCTGGGAACCCGAGGATaGGGAGAGAGGGACGGGCCT +
Preference number: 2 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDLGTRG*GERDGP
Trigger: AGGCCCGTCCCTCTCTCCCCATCCTCGGGTTCCCAG...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 90 bp GTCAACGGCACCTCAACAGGCTGTGGGGGAGAGGGAAGGGTCGTCTaGGCCCTGATCAGCACCAGCGAACAGCACGAGGGCAGAACTCAG +
Preference number: 2 (lower is better)
Translates to: VNGTSTGCGGEGRVV*ALISTSEQHEGRTQ
Trigger: CTGAGTTCTGCCCTCGTGCTGTTCGCTGGTGCTGATCAGGGCCAAGACGACCCTTCCCTCTCCCCCACAGCCTGTTGAGGTGCCGTTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCACGAGGCCGGAACCATaGAGGCCTCATCAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCTRPEP*RPHQAG
Trigger: CCCAGCCTGATGAGGCCTGCATGGTTCCGGCCTCGT...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCGGGGGTTGGCAAACGTaGCCATCACAGCCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCGGWQT*PSQPPQ
Trigger: CTGGGGAGGCTGTGATGGGCACGTTTGCCAACCCCC...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCGAAGCAGCTTCTAAATaGACACTTTGCCACCCACCA +
Preference number: 2 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSEAASK*TLCHPP
Trigger: TGGTGGGTGGCAAAGTGTGCATTTAGAAGCTGCTTC...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 90 bp TTCATGAGGATATCCTGTTTGGGGCACATGGAGCGGCTGCCCAGCTaGGGCGTCCCAAGGTCGGATGCCACAGCTGCCTGCTGGTCTCAC +
Preference number: 2 (lower is better)
Translates to: FMRISCLGHMERLPS*GVPRSDATAACWSH
Trigger: GTGAGACCAGCAGGCAGCTGTGGCATCCGACCTTGGGACGCCCAAGCTGGGCAGCCGCTCCATGTGCCCCAAACAGGATATCCTCATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 90 bp CAAGCCCTGAGCCAGCCTCTCCTCACATTCATGAGGATATCCTGTTaGGGGCACATGGAGCGGCTGCCCAGCTTGGGCGTCCCAAGGTCG +
Preference number: 2 (lower is better)
Translates to: QALSQPLLTFMRISC*GHMERLPSLGVPRS
Trigger: CGACCTTGGGACGCCCAAGCTGGGCAGCCGCTCCATGTGCCCCAAACAGGATATCCTCATGAATGTGAGGAGAGGCTGGCTCAGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGGCAATCACCGGCGCGTaGCGCGTGACTACCTCCTCG +
Preference number: 2 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAAITGA*RVTTSS
Trigger: CGAGGAGGTAGTCACGCGGCACGCGCCGGTGATTGC...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCGAAATACAAACAGACTaGCAACGAGCTCTGGGCAAA +
Preference number: 2 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSEIQTD*QRALGK
Trigger: TTTGCCCAGAGCTCGTTGGCAGTCTGTTTGTATTTC...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCGGCACATGGAGCGGCTaGCCAGCTTGGGCGTCCCAA +
Preference number: 2 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTGTWSG*PAWASQ
Trigger: TTGGGACGCCCAAGCTGGGCAGCCGCTCCATGTGCC...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCCCCCTGACATCCTCATaGCCAGCTGCTGACCGAGTG +
Preference number: 2 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCPLTSS*PAADRV
Trigger: CACTCGGTCAGCAGCTGGGCATGAGGATGTCAGGGG...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGTCTCCCAGCATCCCCTaGGCCAGGTGTGAGGCCAAC +
Preference number: 2 (lower is better)
Translates to: PRAGFLVCALASVPSVFLSPSIP*ARCEAN
Trigger: GTTGGCCTCACACCTGGCCCAGGGGATGCTGGGAGA...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 90 bp CGCCACGGGGACCTAGAGCGCCTACGGCACATTGGAGGCTGCAGGTaGAGCAGGCCACTCTTGTGGGGTAAGATGAGTCCACCAAGTTCA +
Preference number: 2 (lower is better)
Translates to: RHGDLERLRHIGGCR*SRPLLWGKMSPPSS
Trigger: TGAACTTGGTGGACTCATCTTACCCCACAAGAGTGGCCTGCTCAACCTGCAGCCTCCAATGTGCCGTAGGCGCTCTAGGTCCCCGTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGCCGGCGCGTGCCGCGTaGCTACCTCCTCGGCTAATA +
Preference number: 2 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLPARAA*LPPRLI
Trigger: TATTAGCCGAGGAGGTAGTCACGCGGCACGCGCCGG...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACGCAAGGCCCTTGTGCTaGAAAGCCACTGCCGAGAAC +
Preference number: 2 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDARPLC*KATAEN
Trigger: GTTCTCGGCAGTGGCTTTTCAGCACAAGGGCCTTGC...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGGGCCCAGTGCACGCGTaGGTCACAGCGGCTCATGGC +
Preference number: 2 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPGPVHA*VTAAHG
Trigger: GCCATGAGCCGCTGTGACTCACGCGTGCACTGGGCC...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCACTTCTGAGCGAGAATaGGGCGAGGCTGCCGCGTCC +
Preference number: 2 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTTSERE*GEAAAS
Trigger: GGACGCGGCAGCCTCGCCGCATTCTCGCTCAGAAGT...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGTGCATATATACATTGTaGACACACTTGGGAGACAGG +
Preference number: 2 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQCIYTL*THLGDR
Trigger: CCTGTCTCCCAAGTGTGTGCACAATGTATATATGCA...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCCCGAGAACTGGCCTGTaGACTAGAGGCTCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCPRTGL*TRGSAG
Trigger: TCCTGCAGAGCCTCTAGTGCACAGGCCAGTTCTCGG...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCCGGAAGCAGAGCACATaGCGTGCCGGGAGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTRKQST*RAGRFG
Trigger: CCCAAACCTCCCGGCACGGCATGTGCTCTGCTTCCG...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACGGGATCCTGCAGTGGTaGTCTGTCATCGTCACGTCA +
Preference number: 2 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDGILQW*SVIVTS
Trigger: TGACGTGACGATGACAGATCACCACTGCAGGATCCC...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCAGGGCACTGGCAAGCTaGGAGAGGAGGGTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: ASHLLGQECGFPLISRTSRALAS*ERRVLG
Trigger: GCCCAGGACCCTCCTCTCTCAGCTTGCCAGTGCCCT...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCCAGTGCACGCGTaGGTCACAGCGGCTCATGGC +
Preference number: 2 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLGPVHA*VTAAHG
Trigger: GCCATGAGCCGCTGTGACTCACGCGTGCACTGGGCC...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCTTGGAGGCTGCAGGTTaGGCAGGCCACTCTTGTGGG +
Preference number: 2 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTLEAAG*AGHSCG
Trigger: CCCACAAGAGTGGCCTGCTCAACCTGCAGCCTCCAA...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCGTAGTTGCTGAGGCCTaGTCATACCGCATCTCAGGG +
Preference number: 2 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCVVAEA*SYRISG
Trigger: CCCTGAGATGCGGTATGATCAGGCCTCAGCAACTAC...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGAAAAGGAGCCACTTCTaGAGTCTCCCGGCCGCCTCT +
Preference number: 2 (lower is better)
Translates to: PRAGFLVCALASVPSVFLKRSHF*SLPAAS
Trigger: AGAGGCGGCCGGGAGACTGCAGAAGTGGCTCCTTTT...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCCCCGGAGGCTGCCGGTaGGTGTGGCTTCATGTTTCT +
Preference number: 2 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTPGGCR*VWLHVS
Trigger: AGAAACATGAAGCCACACGCACCGGCAGCCTCCGGG...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAGCGGGGGAAACCATCTaGCCGTCCCAGCACCTGAGG +
Preference number: 2 (lower is better)
Translates to: GTMQASSGWVKSQKRELQAGETI*PSQHLR
Trigger: CCTCAGGTGCTGGGACGGGCAGATGGTTTCCCCCGC...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCGCCCATGCAAGTCTCTaGTGGCCACTCTGGCCCCAT +
Preference number: 2 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTAHASL*WPLWPH
Trigger: ATGGGGCCAGAGTGGCCAGCAGAGACTTGCATGGGC...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGTGGGGTGAGAGTGGGTaGGCGGGAGGGAGGTGGCCA +
Preference number: 2 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLWGESG*AGGRWP
Trigger: TGGCCACCTCCCTCCCGCCCACCCACTCTCACCCCA...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACAATCCTCTGGAAGGATaGCAGGGCCAGCTGAGCCTA +
Preference number: 2 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDNPLEG*QGQLSL
Trigger: TAGGCTCAGCTGGCCCTGCCATCCTTCCAGAGGATT...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACTCCTGGTGTGTGCACTaGCTTCGGTCCCATCAGTGT +
Preference number: 2 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDSWCVH*LRSHQC
Trigger: ACACTGATGGGACCGAAGCCAGTGCACACACCAGGA...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCAGTCACAGCGGCTCATaGCAACGGCAAGGGGGCATC +
Preference number: 2 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTSHSGS*QRQGGI
Trigger: GATGCCCCCTTGCCGTTGCCATGAGCCGCTGTGACT...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCGGGGGTTTGCTCCACTaGGAAGATTCCCCAACACAC +
Preference number: 2 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCGGLLH*EDSPTH
Trigger: GTGTGTTGGGGAATCTTCCCAGTGGAGCAAACCCCC...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 90 bp TGGCCTTCCCTGCCCCTGCCTAGAAATGCATCTCAGTTGTCACCTTaGAGCTGCTCCGGCTGCCCTTTAGGAAACGCACCCCTGTGGCAA +
Preference number: 2 (lower is better)
Translates to: WPSLPLPRNASQLSP*SCSGCPLGNAPLWQ
Trigger: TTGCCACAGGGGTGCGTTTCCTAAAGGGCAGCCGGAGCAGCTCAAAGGTGACAACTGAGATGCATTTCTAGGCAGGGGCAGGGAAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGCTACAGAGTCTACGGTaGAGGCTGTGTGGAGCGAGT +
Preference number: 2 (lower is better)
Translates to: PRAGFLVCALASVPSVFLLQSLR*RLCGAS
Trigger: ACTCGCTCCACACAGCCTTCACCGTAGACTCTGTAG...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGAGGGCACTGGCAAGCTaGGAGAGGAGGGTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQRALAS*ERRVLG
Trigger: GCCCAGGACCCTCCTCTCTCAGCTTGCCAGTGCCCT...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGAAAAGGAGCCACTTCTaGAGTCTCCCGGCCGCCTCT +
Preference number: 2 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAKRSHF*SLPAAS
Trigger: AGAGGCGGCCGGGAGACTGCAGAAGTGGCTCCTTTT...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGCCCGGAGGCTGCCGGTaGGTGTGGCTTCATGTTTCT +
Preference number: 2 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLPGGCR*VWLHVS
Trigger: AGAAACATGAAGCCACACGCACCGGCAGCCTCCGGG...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAGAACACCCCGGAGGCTaGCGGTGCGTGTGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: GTMQASSGWVKSQKRELQEHPGG*RCVWLH
Trigger: ATGAAGCCACACGCACCGGCAGCCTCCGGGGTGTTC...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACAAGTGGGAACGAGAGTaGGGTCCGCAAAGAAAGGAC +
Preference number: 2 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDKWERE*GPQRKD
Trigger: GTCCTTTCTTTGCGGACCGCACTCTCGTTCCCACTT...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAACCTGCGGGGTGTTTCTaGTGCAGCCAGGTCTGCACC +
Preference number: 2 (lower is better)
Translates to: GTMQASSGWVKSQKRELQPAGCF*CSQVCT
Trigger: GGTGCAGACCTGGCTGCAGCAGAAACACCCCGCAGG...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCCCGAGAACTGGCCTGTaGACTAGAGGCTCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTPRTGL*TRGSAG
Trigger: TCCTGCAGAGCCTCTAGTGCACAGGCCAGTTCTCGG...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCACAGCCTCCCCAGAATaGAGGCTGGAGGACAGTGTC +
Preference number: 2 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTTASPE*RLEDSV
Trigger: GACACTGTCCTCCAGCCTGCATTCTGGGGAGGCTGT...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGGGGGGTTGGCAAACGTaGCCATCACAGCCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPGGWQT*PSQPPQ
Trigger: CTGGGGAGGCTGTGATGGGCACGTTTGCCAACCCCC...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGTGGGGTGAGAGTGGGTaGGCGGGAGGGAGGTGGCCA +
Preference number: 2 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLWGESG*AGGRWP
Trigger: TGGCCACCTCCCTCCCGCCCACCCACTCTCACCCCA...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCTCTGAGGGGGAGTCATaGCAGCTTGTGCTGGGGGCC +
Preference number: 2 (lower is better)
Translates to: ASHLLGQECGFPLISRTSSEGES*QLVLGA
Trigger: GGCCCCCAGCACAAGCTGCCATGACTCCCCCTCAGA...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCTGTCCAGATCACCCATaGGGTTACACAGGCCGCTCG +
Preference number: 2 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTCPDHP*GYTGRS
Trigger: CGAGCGGCCTGTGTAACCCCATGGGTGATCTGGACA...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGTCTCCCAGCATCCCCTaGGCCAGGTGTGAGGCCAAC +
Preference number: 2 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPSPSIP*ARCEAN
Trigger: GTTGGCCTCACACCTGGCCCAGGGGATGCTGGGAGA...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGCCAAGCACGGCGACCTaGGGTGCTCTCCAGCAAGCT +
Preference number: 2 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPPSTAT*GALQQA
Trigger: AGCTTGCTGGAGAGCACCCCAGGTCGCCGTGCTTGG...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCCAAGCCGCGGAAAGGTaGAGAATGCACGCATTGATG +
Preference number: 2 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCQAAER*RMHALM
Trigger: CATCAATGCGTGCATTCTCCACCTTTCCGCGGCTTG...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGAGCGGCTGCCCAGCTTaGGCGTCCCAAGGTCGGATG +
Preference number: 2 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLSGCPA*ASQGRM
Trigger: CATCCGACCTTGGGACGCCCAAGCTGGGCAGCCGCT...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 90 bp CTCCGCCCCCAGTCCTTGCCTCTCCCAGCCTTGGTGGTAATTAGCTaGAAAGTGGGAACGAGAGTGCGGTCCGCAAAGAAAGGACTTCTG +
Preference number: 2 (lower is better)
Translates to: LRPQSLPLPALVVIS*KVGTRVRSAKKGLL
Trigger: CAGAAGTCCTTTCTTTGCGGACCGCACTCTCGTTCCCACTTTCAAGCTAATTACCACCAAGGCTGGGAGAGGCAAGGACTGGGGGCGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCGGGATCCTGCAGTGGTaGTCTGTCATCGTCACGTCA +
Preference number: 2 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTGILQW*SVIVTS
Trigger: TGACGTGACGATGACAGATCACCACTGCAGGATCCC...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGCCCCTGGGCCAGGTGTaGGGCCAACACTTATCACAC +
Preference number: 2 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPPLGQV*GQHLSH
Trigger: GTGTGATAAGTGTTGGCCTCACACCTGGCCCAGGGG...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCACCACAAGGGCTCCCTaGAGAAAGCCACTCAGAAAT +
Preference number: 2 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCTTRAP*RKPLRN
Trigger: ATTTCTGAGTGGCTTTCTTCAGGGAGCCCTTGTGGT...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCTGCTCACCCTCGAGCTaGTCATTTCCTGGGATGAAA +
Preference number: 2 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCCSPSS*SFPGMK
Trigger: TTTCATCCCAGGAAATGAGCAGCTCGAGGGTGAGCA...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGGCGAGTGACCCGCTaGCTTCTCCCTCCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: GTMQASSGWVKSQKRELQWRVTR*LLPPFQ
Trigger: CTGGAAAGGAGGGAGAAGGCAGCGGGTCACTCGCCA...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCAGGTTTCCTGGTGTGTaGACTGGCTTCGGTCCCATC +
Preference number: 2 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTRFPGV*TGFGPI
Trigger: GATGGGACCGAAGCCAGTGCACACACCAGGAAACCT...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGGGGTTGGCAAACGTaGCCATCACAGCCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLGGWQT*PSQPPQ
Trigger: CTGGGGAGGCTGTGATGGGCACGTTTGCCAACCCCC...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGCCAAGCAAGGCCCAGTaGACGCGTGAGTCACAGCGG +
Preference number: 2 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQPSKAQ*TRESQR
Trigger: CCGCTGTGACTCACGCGTGCACTGGGCCTTGCTTGG...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACGGGAGGTTTGGGGTTTaGTTTCCAAACACCTTTGCC +
Preference number: 2 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDGRFGV*FPNTFA
Trigger: GGCAAAGGTGTTTGGAAAGCAAACCCCAAACCTCCC...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGCGGAAGCAGAGCACATaGCGTGCCGGGAGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLRKQST*RAGRFG
Trigger: CCCAAACCTCCCGGCACGGCATGTGCTCTGCTTCCG...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGTCTCCCAGCATCCCCTaGGCCAGGTGTGAGGCCAAC +
Preference number: 2 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQSPSIP*ARCEAN
Trigger: GTTGGCCTCACACCTGGCCCAGGGGATGCTGGGAGA...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGCACGGGCAGGTTTCCTaGTGTGTGCACTGGCTTCGG +
Preference number: 2 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPHGQVS*CVHWLR
Trigger: CCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTG...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGCCAAGCACGGCGACCTaGGGTGCTCTCCAGCAAGCT +
Preference number: 2 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQPSTAT*GALQQA
Trigger: AGCTTGCTGGAGAGCACCCCAGGTCGCCGTGCTTGG...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTGCAGGGAGGGAGAGTTaGTGTCCTGGGCGCCACGGG +
Preference number: 2 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGAGRES*CPGRHG
Trigger: CCCGTGGCGCCCAGGACACCAACTCTCCCTCCCTGC...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCCCGTGCCGGGAGGTTTaGGGTTTGCTTTCCAAACAC +
Preference number: 2 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTPCREV*GLLSKH
Trigger: GTGTTTGGAAAGCAAACCCCAAACCTCCCGGCACGG...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 90 bp ACAGATGAGGAAAAAGAGCCCAGGAAGCTGGGTGCTTGCCTAGAGTaGCAGAGGAATCCTCTGGAAGGATGGCAGGGCCAGCTGAGCCTA +
Preference number: 2 (lower is better)
Translates to: TDEEKEPRKLGACLE*QRNPLEGWQGQLSL
Trigger: TAGGCTCAGCTGGCCCTGCCATCCTTCCAGAGGATTCCTCTGCAACTCTAGGCAAGCACCCAGCTTCCTGGGCTCTTTTTCCTCATCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 90 bp GAGCGCCTACGGCACATTGGAGGCTGCAGGTTGAGCAGGCCACTCTaGTGGGGTAAGATGAGTCCACCAAGTTCAAGCACAAAACACGCT +
Preference number: 2 (lower is better)
Translates to: ERLRHIGGCRLSRPL*WGKMSPPSSSTKHA
Trigger: AGCGTGTTTTGTGCTTGAACTTGGTGGACTCATCTTACCCCACAAGAGTGGCCTGCTCAACCTGCAGCCTCCAATGTGCCGTAGGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGAAGGCGGCGGACGTCTaGAGCGGCTGGATACCGCAA +
Preference number: 2 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLKAADV*SGWIPQ
Trigger: TTGCGGTATCCAGCCGCTTCAGACGTCCGCCGCCTT...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAGCCCGTCCCAGCACCTaGGGTCAGAATCACAGAGTA +
Preference number: 2 (lower is better)
Translates to: GTMQASSGWVKSQKRELQARPST*GQNHRV
Trigger: TACTCTGTGATTCTGACCTCAGGTGCTGGGACGGGC...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGTGGTTTTGGGGCCAGTaGCTCAGGAACTTGTCACTT +
Preference number: 2 (lower is better)
Translates to: PRAGFLVCALASVPSVFLWFWGQ*LRNLSL
Trigger: AAGTGACAAGTTCCTGAGTCACTGGCCCCAAAACCA...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCGGCCCAGTGCACGCGTaGGTCACAGCGGCTCATGGC +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIGPVHA*VTAAHG
Trigger: GCCATGAGCCGCTGTGACTCACGCGTGCACTGGGCC...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCCTCCTGAGTAGTTGCTaGGGCCTGATCATACCGCAT +
Preference number: 2 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTLLSSC*GLIIPH
Trigger: ATGCGGTATGATCAGGCCTCAGCAACTACTCAGGAG...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTCCACTCGCTATCACCTaGGCGTGCTGGCCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGPLAIT*ACWPGL
Trigger: CAGGCCAGGCCAGCACGCTCAGGTGATAGCGAGTGG...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTCCCGGAGGCTGCCGGTaGGTGTGGCTTCATGTTTCT +
Preference number: 2 (lower is better)
Translates to: IRLGEISEEGASMQGPCAPGGCR*VWLHVS
Trigger: AGAAACATGAAGCCACACGCACCGGCAGCCTCCGGG...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGGAACACCCCGGAGGCTaGCGGTGCGTGTGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLEHPGG*RCVWLH
Trigger: ATGAAGCCACACGCACCGGCAGCCTCCGGGGTGTTC...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGGCCCTAGAAAGTGGCTaGGGAGTGGAGCAGATGGAC +
Preference number: 2 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPALESG*GVEQMD
Trigger: GTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGC...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTTCCGCCCCCAGTCCTTaGCTCTCCCAGCCTTGGTGG +
Preference number: 2 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGSAPSP*LSQPWW
Trigger: CCACCAAGGCTGGGAGAGGCAAGGACTGGGGGCGGA...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGGATGCCACAGCTGCCTaGTGGTCTCACCTAGCAGCC +
Preference number: 2 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQDATAA*WSHLAA
Trigger: GGCTGCTAGGTGAGACCAGCAGGCAGCTGTGGCATC...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCATGGGGTGAGAGTGGGTaGGCGGGAGGGAGGTGGCCA +
Preference number: 2 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSWGESG*AGGRWP
Trigger: TGGCCACCTCCCTCCCGCCCACCCACTCTCACCCCA...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCTGGGGTGAGAGTGGGTaGGCGGGAGGGAGGTGGCCA +
Preference number: 2 (lower is better)
Translates to: IYAISVSTTESTVKAVWSWGESG*AGGRWP
Trigger: TGGCCACCTCCCTCCCGCCCACCCACTCTCACCCCA...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGTCCAGATCACCCATaGGGTTACACAGGCCGCTCG +
Preference number: 2 (lower is better)
Translates to: GTMQASSGWVKSQKRELQCPDHP*GYTGRS
Trigger: CGAGCGGCCTGTGTAACCCCATGGGTGATCTGGACA...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 90 bp CGAGTGACCCGCTGCCTTCTCCCTCCTTTCCAGTGCATATATACATaGTGCACACACTTGGGAGACAGGACACTGCACCTGGTTTTGGGG +
Preference number: 2 (lower is better)
Translates to: RVTRCLLPPFQCIYT*CTHLGDRTLHLVLG
Trigger: CCCCAAAACCAGGTGCAGTGTCCTGTCTCCCAAGTGTGTGCACAATGTATATATGCACTGGAAAGGAGGGAGAAGGCAGCGGGTCACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTCCGGCGCGTGCCGCGTaGCTACCTCCTCGGCTAATA +
Preference number: 2 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFPARAA*LPPRLI
Trigger: TATTAGCCGAGGAGGTAGTCACGCGGCACGCGCCGG...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCCCGGCGCGTGCCGCGTaGCTACCTCCTCGGCTAATA +
Preference number: 2 (lower is better)
Translates to: IYAISVSTTESTVKAVWSPARAA*LPPRLI
Trigger: TATTAGCCGAGGAGGTAGTCACGCGGCACGCGCCGG...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTCCTGCGATTGGCGAGTaGCCCGCTGCCTTCTCCCTC +
Preference number: 2 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFPAIGE*PAAFSL
Trigger: GAGGGAGAAGGCAGCGGGTCACTCGCCAATCGCAGG...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGGAGCAAGGACCTCATTaGTGCTGTTCCCCGCCATGT +
Preference number: 2 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPEQGPH*CCSPPC
Trigger: ACATGGCGGGGAACAGCATCAATGAGGTCCTTGCTC...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGGTAGTTGCTGAGGCCTaGTCATACCGCATCTCAGGG +
Preference number: 2 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPVVAEA*SYRISG
Trigger: CCCTGAGATGCGGTATGATCAGGCCTCAGCAACTAC...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCCCACTCGCTATCACCTaGGCGTGCTGGCCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIPLAIT*ACWPGL
Trigger: CAGGCCAGGCCAGCACGCTCAGGTGATAGCGAGTGG...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCCCCACCTCCAGGCCCTaGGGCCCATCTGTAGAGGGT +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIPTSRP*GPSVEG
Trigger: ACCCTCTACAGATGGGCCTCAGGGCCTGGAGGTGGG...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGGCAATCACCGGCGCGTaGCGCGTGACTACCTCCTCG +
Preference number: 2 (lower is better)
Translates to: DETQTEKSNGRTMELSSRAITGA*RVTTSS
Trigger: CGAGGAGGTAGTCACGCGGCACGCGCCGGTGATTGC...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCGCAATCACCGGCGCGTaGCGCGTGACTACCTCCTCG +
Preference number: 2 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPAITGA*RVTTSS
Trigger: CGAGGAGGTAGTCACGCGGCACGCGCCGGTGATTGC...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCGGCTTCATGTTTCTGTaGTACATGAGTCTAGTGTCC +
Preference number: 2 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCGFMFL*YMSLVS
Trigger: GGACACTAGACTCATGTAGCACAGAAACATGAAGCC...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGGAACACCCCGGAGGCTaGCGGTGCGTGTGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQEHPGG*RCVWLH
Trigger: ATGAAGCCACACGCACCGGCAGCCTCCGGGGTGTTC...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCACAGAGTACTGTCCCTaGGGGGTGTTTCTGCTGCAG +
Preference number: 2 (lower is better)
Translates to: ASHLLGQECGFPLISRTSTEYCP*GVFLLQ
Trigger: CTGCAGCAGAAACACCCCGCAGGGACAGTACTCTGT...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTCCGAGAACTGGCCTGTaGACTAGAGGCTCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: IRLGEISEEGASMQGPCAPRTGL*TRGSAG
Trigger: TCCTGCAGAGCCTCTAGTGCACAGGCCAGTTCTCGG...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAGTGCTGAAAAGCCACTaGCGAGAACTGGCCTGTGCA +
Preference number: 2 (lower is better)
Translates to: GTMQASSGWVKSQKRELQVLKSH*RELACA
Trigger: TGCACAGGCCAGTTCTCGGCAGTGGCTTTTCAGCAC...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGGCCCAGGAAGCTGGGTaGTTGCCTAGAGTTGCAGAG +
Preference number: 2 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLAQEAG*LPRVAE
Trigger: CTCTGCAACTCTAGGCAAGCACCCAGCTTCCTGGGC...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCAGGTTTCCTGGTGTGTaGACTGGCTTCGGTCCCATC +
Preference number: 2 (lower is better)
Translates to: ASHLLGQECGFPLISRTSRFPGV*TGFGPI
Trigger: GATGGGACCGAAGCCAGTGCACACACCAGGAAACCT...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGCTCAGGTTGGGGGAGTaGTCCCTACAGGTACCCTGT +
Preference number: 2 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLLRLGE*SLQVPC
Trigger: ACAGGGTACCTGTAGGGAGCACTCCCCCAACCTGAG...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGTGGATACCGCAACGATaGAAAATCAGGCGAGGTACT +
Preference number: 2 (lower is better)
Translates to: PRAGFLVCALASVPSVFLWIPQR*KIRRGT
Trigger: AGTACCTCGCCTGATTTTCCATCGTTGCGGTATCCA...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCAATCCTCTGGAAGGATaGCAGGGCCAGCTGAGCCTA +
Preference number: 2 (lower is better)
Translates to: ASHLLGQECGFPLISRTSNPLEG*QGQLSL
Trigger: TAGGCTCAGCTGGCCCTGCCATCCTTCCAGAGGATT...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGTGCAGAGGAATCCTCTaGAAGGATGGCAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQCRGIL*KDGRAS
Trigger: GCTGGCCCTGCCATCCTTCCAGAGGATTCCTCTGCA...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTCTGGGAACCCGAGGATaGGGAGAGAGGGACGGGCCT +
Preference number: 2 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFLGTRG*GERDGP
Trigger: AGGCCCGTCCCTCTCTCCCCATCCTCGGGTTCCCAG...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 90 bp GACACTGCACCTGGTTTTGGGGCCAGTGACTCAGGAACTTGTCACTaGCTCACCCTCGAGCTGCTCATTTCCTGGGATGAAACAGAGAGA +
Preference number: 2 (lower is better)
Translates to: DTAPGFGASDSGTCH*LTLELLISWDETER
Trigger: TCTCTCTGTTTCATCCCAGGAAATGAGCAGCTCGAGGGTGAGCAAGTGACAAGTTCCTGAGTCACTGGCCCCAAAACCAGGTGCAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATCCGGCGCGTGCCGCGTaGCTACCTCCTCGGCTAATA +
Preference number: 2 (lower is better)
Translates to: TVVKVLRLVASAPVILLDPARAA*LPPRLI
Trigger: TATTAGCCGAGGAGGTAGTCACGCGGCACGCGCCGG...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGATGCTGTGGTTTGGTTaGCTACATTTGACTACCACC +
Preference number: 2 (lower is better)
Translates to: PRAGFLVCALASVPSVFLMLWFG*LHLTTT
Trigger: GGTGGTAGTCAAATGTAGTCAACCAAACCACAGCAT...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCCAGTCTCCGCGAAGCTaGACGCGGGGGTGCAGATGT +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIQSPRS*TRGCRC
Trigger: ACATCTGCACCCCCGCGTTCAGCTTCGCGGAGACTG...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCTCGGAAGGACCAGTCTaGGGACTGTTTCTTAGTGAT +
Preference number: 2 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTSEGPV*GLFLSD
Trigger: ATCACTAAGAAACAGTCCTCAGACTGGTCCTTCCGA...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAACTTCTGAGCGAGAATaGGGCGAGGCTGCCGCGTCC +
Preference number: 2 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSTSERE*GEAAAS
Trigger: GGACGCGGCAGCCTCGCCGCATTCTCGCTCAGAAGT...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCACTTCTGAGCGAGAATaGGGCGAGGCTGCCGCGTCC +
Preference number: 2 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPTSERE*GEAAAS
Trigger: GGACGCGGCAGCCTCGCCGCATTCTCGCTCAGAAGT...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCGAACACCCCGGAGGCTaGCGGTGCGTGTGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: IYAISVSTTESTVKAVWSEHPGG*RCVWLH
Trigger: ATGAAGCCACACGCACCGGCAGCCTCCGGGGTGTTC...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACAAGACCCTCAAAAACTaGCTTTCCTTCTGCTACCAA +
Preference number: 2 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDKTLKN*LSFCYQ
Trigger: TTGGTAGCAGAAGGAAAGGCAGTTTTTGAGGGTCTT...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAACAGGAACTTGTCACTTaGTCACCCTCGAGCTGCTCA +
Preference number: 2 (lower is better)
Translates to: GTMQASSGWVKSQKRELQQELVT*SPSSCS
Trigger: TGAGCAGCTCGAGGGTGAGCAAGTGACAAGTTCCTG...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCTGCATATATACATTGTaGACACACTTGGGAGACAGG +
Preference number: 2 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCCIYTL*THLGDR
Trigger: CCTGTCTCCCAAGTGTGTGCACAATGTATATATGCA...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCGGTTTGAAACCTCACTaGACCCTGCAAGTTTCACAG +
Preference number: 2 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTGLKPH*TLQVSQ
Trigger: CTGTGAAACTTGCAGGGTGCAGTGAGGTTTCAAACC...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCCACGGCGACCTGGGGTaGTCTCCAGCAAGCTCCGAT +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIHGDLG*SPASSD
Trigger: ATCGGAGCTTGCTGGAGAGCACCCCAGGTCGCCGTG...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTCACGGCGACCTGGGGTaGTCTCCAGCAAGCTCCGAT +
Preference number: 2 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFHGDLG*SPASSD
Trigger: ATCGGAGCTTGCTGGAGAGCACCCCAGGTCGCCGTG...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGCCAGAACATCCTAAGTaGAGGGAGGGAGAGTTGGTG +
Preference number: 2 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPPEHPK*REGELV
Trigger: CACCAACTCTCCCTCCCTGCACTTAGGATGTTCTGG...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTGCAGAGCACATGCCGTaGCGGGAGGTTTGGGGTTTG +
Preference number: 2 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGAEHMP*REVWGL
Trigger: CAAACCCCAAACCTCCCGGCACGGCATGTGCTCTGC...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGCTAAGGAGATACACCTaGGCCCCTTCTCTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQLRRYT*APSLSC
Trigger: GCAGGAGAGAGAAGGGGCGCAGGTGTATCTCCTTAG...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGATCCAGTTCACTCTCTaGCTGTGTCGGAAGGACCAG +
Preference number: 2 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPIQFTL*LCRKDQ
Trigger: CTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGAT...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTGTCGGATGCCACAGCTaGCTGCTGGTCTCACCTAGC +
Preference number: 2 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGVGCHS*LLVSPS
Trigger: GCTAGGTGAGACCAGCAGGCAGCTGTGGCATCCGAC...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGGAGTCCCTTGGTCCTTaGTTAGCAAAAGCCGTATCC +
Preference number: 2 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLESLGP*LAKAVS
Trigger: GGATACGGCTTTTGCTAACCAAGGACCAAGGGACTC...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCAAAGTGGCTGCGGAGTaGAGCAGATGGACATCACTG +
Preference number: 2 (lower is better)
Translates to: ASHLLGQECGFPLISRTSKVAAE*SRWTSL
Trigger: CAGTGATGTCCATCTGCTCCACTCCGCAGCCACTTT...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGTGGGCCTCCCTCAGCTaGCTGTTTCTCATCAAGGGA +
Preference number: 2 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLWASLS*LFLIKG
Trigger: TCCCTTGATGAGAAACAGCCAGCTGAGGGAGGCCCA...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACCAACACTTATCACACTaGTTTGAAACCTCACTGCAC +
Preference number: 2 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDQHLSH*FETSLH
Trigger: GTGCAGTGAGGTTTCAAACCAGTGTGATAAGTGTTG...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTCTGTTCCCCGCCATGTaGAGGGCAGGGCACTGGCAA +
Preference number: 2 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFLFPAM*RAGHWQ
Trigger: TTGCCAGTGCCCTGCCCTCCACATGGCGGGGAACAG...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTGGAGAGTTGGTGTCCTaGGCGCCACGGGGACCTAGA +
Preference number: 2 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFGELVS*APRGPR
Trigger: TCTAGGTCCCCGTGGCGCCCAGGACACCAACTCTCC...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGACCGCTGCTCTGGGGTaGGTGTTTACTACACTGGTG +
Preference number: 2 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQTAALG*VFTTLV
Trigger: CACCAGTGTAGTAAACACCCACCCCAGAGCAGCGGT...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 90 bp TGCCTTCTCCCTCCTTTCCAGTGCATATATACATTGTGCACACACTaGGGAGACAGGACACTGCACCTGGTTTTGGGGCCAGTGACTCAG +
Preference number: 2 (lower is better)
Translates to: CLLPPFQCIYTLCTH*GDRTLHLVLGPVTQ
Trigger: CTGAGTCACTGGCCCCAAAACCAGGTGCAGTGTCCTGTCTCCCAAGTGTGTGCACAATGTATATATGCACTGGAAAGGAGGGAGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 90 bp AATTCATTAAGATCCCGCTCTCTCCTGTGTCTGAGAACCCTGCGATaGGCGAGTGACCCGCTGCCTTCTCCCTCCTTTCCAGTGCATATA +
Preference number: 2 (lower is better)
Translates to: NSLRSRSLLCLRTLR*ASDPLPSPSFPVHI
Trigger: TATATGCACTGGAAAGGAGGGAGAAGGCAGCGGGTCACTCGCCAATCGCAGGGTTCTCAGACACAGGAGAGAGCGGGATCTTAATGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGATGCTGTGGTTTGGTTaGCTACATTTGACTACCACC +
Preference number: 2 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAMLWFG*LHLTTT
Trigger: GGTGGTAGTCAAATGTAGTCAACCAAACCACAGCAT...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTGCCCGTCCCAGCACCTaGGGTCAGAATCACAGAGTA +
Preference number: 2 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGARPST*GQNHRV
Trigger: TACTCTGTGATTCTGACCTCAGGTGCTGGGACGGGC...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTGCCAATGCGGACATGTaGCGCGAAGAAAGCCGCAGA +
Preference number: 2 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGANADM*REESRR
Trigger: TCTGCGGCTTTCTTCGCGTCACATGTCCGCATTGGC...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATACTTCTGAGCGAGAATaGGGCGAGGCTGCCGCGTCC +
Preference number: 2 (lower is better)
Translates to: TVVKVLRLVASAPVILLDTSERE*GEAAAS
Trigger: GGACGCGGCAGCCTCGCCGCATTCTCGCTCAGAAGT...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAACCTCCTCGGCTAATATaGTTTCTTCTCGGCGATGAC +
Preference number: 2 (lower is better)
Translates to: GTMQASSGWVKSQKRELQPPRLI*FLLGDD
Trigger: GTCATCGCCGAGAAGAAAGCATATTAGCCGAGGAGG...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTAAGTGGGAACGAGAGTaGGGTCCGCAAAGAAAGGAC +
Preference number: 2 (lower is better)
Translates to: IRLGEISEEGASMQGPCAKWERE*GPQRKD
Trigger: GTCCTTTCTTTGCGGACCGCACTCTCGTTCCCACTT...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCTGGCGAGTGACCCGCTaGCTTCTCCCTCCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIWRVTR*LLPPFQ
Trigger: CTGGAAAGGAGGGAGAAGGCAGCGGGTCACTCGCCA...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTGCAGAGCACATGCCGTaGCGGGAGGTTTGGGGTTTG +
Preference number: 2 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFAEHMP*REVWGL
Trigger: CAAACCCCAAACCTCCCGGCACGGCATGTGCTCTGC...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGAGGGATGCTGTGGTTTaGTTGACTACATTTGACTAC +
Preference number: 2 (lower is better)
Translates to: PRAGFLVCALASVPSVFLRDAVV*LTTFDY
Trigger: GTAGTCAAATGTAGTCAACCAAACCACAGCATCCCT...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTCACGGGCAGGTTTCCTaGTGTGTGCACTGGCTTCGG +
Preference number: 2 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFHGQVS*CVHWLR
Trigger: CCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTG...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCGCGCCTACGGCACATTaGAGGCTGCAGGTTGAGCAG +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIAPTAH*RLQVEQ
Trigger: CTGCTCAACCTGCAGCCTCCAATGTGCCGTAGGCGC...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTGCAGGGAGGGAGAGTTaGTGTCCTGGGCGCCACGGG +
Preference number: 2 (lower is better)
Translates to: LERGLYTIATSLCYFTHLAGRES*CPGRHG
Trigger: CCCGTGGCGCCCAGGACACCAACTCTCCCTCCCTGC...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 90 bp AGCATCCCCTGGGCCAGGTGTGAGGCCAACACTTATCACACTGGTTaGAAACCTCACTGCACCCTGCAAGTTTCACAGATGAGGAAAAAG +
Preference number: 2 (lower is better)
Translates to: SIPWARCEANTYHTG*KPHCTLQVSQMRKK
Trigger: CTTTTTCCTCATCTGTGAAACTTGCAGGGTGCAGTGAGGTTTCAAACCAGTGTGATAAGTGTTGGCCTCACACCTGGCCCAGGGGATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGATGCTGTGGTTTGGTTaGCTACATTTGACTACCACC +
Preference number: 2 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLMLWFG*LHLTTT
Trigger: GGTGGTAGTCAAATGTAGTCAACCAAACCACAGCAT...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTTGGTTTTGGGGCCAGTaGCTCAGGAACTTGTCACTT +
Preference number: 2 (lower is better)
Translates to: IRLGEISEEGASMQGPCAWFWGQ*LRNLSL
Trigger: AAGTGACAAGTTCCTGAGTCACTGGCCCCAAAACCA...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCGCTCTCTCCTGTGTCTaGGAACCCTGCGATTGGCGA +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIALSCV*EPCDWR
Trigger: TCGCCAATCGCAGGGTTCTCAGACACAGGAGAGAGC...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTGCAAGGCCCTTGTGCTaGAAAGCCACTGCCGAGAAC +
Preference number: 2 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFARPLC*KATAEN
Trigger: GTTCTCGGCAGTGGCTTTTCAGCACAAGGGCCTTGC...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAAAAAGGAGCCACTTCTaGAGTCTCCCGGCCGCCTCT +
Preference number: 2 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSKRSHF*SLPAAS
Trigger: AGAGGCGGCCGGGAGACTGCAGAAGTGGCTCCTTTT...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGAAAAGGAGCCACTTCTaGAGTCTCCCGGCCGCCTCT +
Preference number: 2 (lower is better)
Translates to: DETQTEKSNGRTMELSSRKRSHF*SLPAAS
Trigger: AGAGGCGGCCGGGAGACTGCAGAAGTGGCTCCTTTT...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATCCCGGAGGCTGCCGGTaGGTGTGGCTTCATGTTTCT +
Preference number: 2 (lower is better)
Translates to: TVVKVLRLVASAPVILLDPGGCR*VWLHVS
Trigger: AGAAACATGAAGCCACACGCACCGGCAGCCTCCGGG...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTGCGGGGGAAACCATCTaGCCGTCCCAGCACCTGAGG +
Preference number: 2 (lower is better)
Translates to: LERGLYTIATSLCYFTHLAGETI*PSQHLR
Trigger: CCTCAGGTGCTGGGACGGGCAGATGGTTTCCCCCGC...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCGCCCAGGAAGCTGGGTaGTTGCCTAGAGTTGCAGAG +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIAQEAG*LPRVAE
Trigger: CTCTGCAACTCTAGGCAAGCACCCAGCTTCCTGGGC...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGGGTTTGAAACCTCACTaGACCCTGCAAGTTTCACAG +
Preference number: 2 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPGLKPH*TLQVSQ
Trigger: CTGTGAAACTTGCAGGGTGCAGTGAGGTTTCAAACC...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGAGAATCACCTGCCAATaGGGACATGTGACGCGAAGA +
Preference number: 2 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLRITCQ*GHVTRR
Trigger: TCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCT...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCCTCAGGTTGGGGGAGTaGTCCCTACAGGTACCCTGT +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCILRLGE*SLQVPC
Trigger: ACAGGGTACCTGTAGGGAGCACTCCCCCAACCTGAG...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGTGTGTTAAGGGGGTTTaGTCCACTGGGAAGATTCCC +
Preference number: 2 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLCVKGV*STGKIP
Trigger: GGGAATCTTCCCAGTGGAGCAAACCCCCTTAACACA...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTGCGGAGTGGAGCAGATaGACATCACTGAGAATGGTA +
Preference number: 2 (lower is better)
Translates to: IRLGEISEEGASMQGPCAAEWSR*TSLRMV
Trigger: TACCATTCTCAGTGATGTCCATCTGCTCCACTCCGC...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGTCACAGACGGGACACTaGCCACTTCTCTCTAATCAC +
Preference number: 2 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQSQTGH*PLLSNH
Trigger: GTGATTAGAGAGAAGTGGCCAGTGTCCCGTCTGTGA...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCGGAGTCTCTATCATATaGTTTCACCATCCTCAGGTT +
Preference number: 2 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTGVSII*FHHPQV
Trigger: AACCTGAGGATGGTGAAACCATATGATAGAGACTCC...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 90 bp TTTCGAAAGACCCTCAAAAACTGCCTTTCCTTCTGCTACCAAAACTaGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCAC +
Preference number: 2 (lower is better)
Translates to: FRKTLKNCLSFCYQN*GPRKWLRSGADGHH
Trigger: GTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGTAGCAGAAGGAAAGGCAGTTTTTGAGGGTCTTTCGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCGAGCAAGGACCTCATTaGTGCTGTTCCCCGCCATGT +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIEQGPH*CCSPPC
Trigger: ACATGGCGGGGAACAGCATCAATGAGGTCCTTGCTC...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGTCTTGTGGGGTAAGATaGGTCCACCAAGTTCAAGCA +
Preference number: 2 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQSCGVR*VHQVQA
Trigger: TGCTTGAACTTGGTGGACTCATCTTACCCCACAAGA...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTACTTCTGAGCGAGAATaGGGCGAGGCTGCCGCGTCC +
Preference number: 2 (lower is better)
Translates to: LERGLYTIATSLCYFTHLTSERE*GEAAAS
Trigger: GGACGCGGCAGCCTCGCCGCATTCTCGCTCAGAAGT...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATAAAAGGAGCCACTTCTaGAGTCTCCCGGCCGCCTCT +
Preference number: 2 (lower is better)
Translates to: TVVKVLRLVASAPVILLDKRSHF*SLPAAS
Trigger: AGAGGCGGCCGGGAGACTGCAGAAGTGGCTCCTTTT...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGAAAACCACCCCATCTTaGCAGAGTCCCTTGGTCCTT +
Preference number: 2 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLKTTPS*QSPLVL
Trigger: AAGGACCAAGGGACTCTGGCAAGATGGGGTGGTTTT...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGAAGAGGGAGCTTCAATaGAAGGCCCTTGTGCTGAAA +
Preference number: 2 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLKRELQ*KALVLK
Trigger: TTTCAGCACAAGGGCCTTGCATTGAAGCTCCCTCTT...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTATCCAGTTCACTCTCTaGCTGTGTCGGAAGGACCAG +
Preference number: 2 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGIQFTL*LCRKDQ
Trigger: CTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGAT...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTGCTCTCTCCTGTGTGTaGTTTAGGGGAGTTTATGAA +
Preference number: 2 (lower is better)
Translates to: TKTWALESGCGVEQMDITALSCV*FRGVYE
Trigger: TTCATAAACTCCCCTAAACCACACACAGGAGAGAGC...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGGAGTCCCTTGGTCCTTaGTTAGCAAAAGCCGTATCC +
Preference number: 2 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLESLGP*LAKAVS
Trigger: GGATACGGCTTTTGCTAACCAAGGACCAAGGGACTC...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTTCTGAGGGGGAGTCATaGCAGCTTGTGCTGGGGGCC +
Preference number: 2 (lower is better)
Translates to: LERGLYTIATSLCYFTHLSEGES*QLVLGA
Trigger: GGCCCCCAGCACAAGCTGCCATGACTCCCCCTCAGA...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTTGGGCCTCCCTCAGCTaGCTGTTTCTCATCAAGGGA +
Preference number: 2 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFWASLS*LFLIKG
Trigger: TCCCTTGATGAGAAACAGCCAGCTGAGGGAGGCCCA...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTCCAAGCACGGCGACCTaGGGTGCTCTCCAGCAAGCT +
Preference number: 2 (lower is better)
Translates to: LERGLYTIATSLCYFTHLPSTAT*GALQQA
Trigger: AGCTTGCTGGAGAGCACCCCAGGTCGCCGTGCTTGG...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTTGCTTACCGCTGCTCTaGGGTGGGTGTTTACTACAC +
Preference number: 2 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGCLPLL*GGCLLH
Trigger: GTGTAGTAAACACCCACCCCAGAGCAGCGGTAAGCA...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTACTTTTGGATACGAGTaGGCTCCACTTAGCTTCGTT +
Preference number: 2 (lower is better)
Translates to: IRLGEISEEGASMQGPCATFGYE*APLSFV
Trigger: AACGAAGCTAAGTGGAGCTCACTCGTATCCAAAAGT...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCCTCCTGAGTAGTTGCTaGGGCCTGATCATACCGCAT +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCILLSSC*GLIIPH
Trigger: ATGCGGTATGATCAGGCCTCAGCAACTACTCAGGAG...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGCCTCCTCGGCTAATATaGTTTCTTCTCGGCGATGAC +
Preference number: 2 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQPPRLI*FLLGDD
Trigger: GTCATCGCCGAGAAGAAAGCATATTAGCCGAGGAGG...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAGCAATCACCGGCGCGTaGCGCGTGACTACCTCCTCG +
Preference number: 2 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGAITGA*RVTTSS
Trigger: CGAGGAGGTAGTCACGCGGCACGCGCCGGTGATTGC...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGAAAACCACCCCATCTTaGCAGAGTCCCTTGGTCCTT +
Preference number: 2 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQKTTPS*QSPLVL
Trigger: AAGGACCAAGGGACTCTGGCAAGATGGGGTGGTTTT...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCTTCATGTTTCTGTaGTACATGAGTCTAGTGTCC +
Preference number: 2 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLGFMFL*YMSLVS
Trigger: GGACACTAGACTCATGTAGCACAGAAACATGAAGCC...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCCCAGAACATCCTAAGTaGAGGGAGGGAGAGTTGGTG +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIPEHPK*REGELV
Trigger: CACCAACTCTCCCTCCCTGCACTTAGGATGTTCTGG...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCGCCCCTTCTCTCTCCTaGATAATGGGAGGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIAPSLS*IMGGKL
Trigger: CAGCTTTCCTCCCATTATGCAGGAGAGAGAAGGGGC...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCAGGTTTGCTTACCGCTaGTCTGGGGTGGGTGTTTAC +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIRFAYR*SGVGVY
Trigger: GTAAACACCCACCCCAGAGCAGCGGTAAGCAAACCT...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGTCCCCAACACACTCATaGCTTGTTTGGTTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLSPTHS*LVWFLS
Trigger: AGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGA...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGTGGATACCGCAACGATaGAAAATCAGGCGAGGTACT +
Preference number: 2 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLWIPQR*KIRRGT
Trigger: AGTACCTCGCCTGATTTTCCATCGTTGCGGTATCCA...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTCACCTGTTATACTTTTaGATACGAGTGAGCTCCACT +
Preference number: 2 (lower is better)
Translates to: TKTWALESGCGVEQMDITHLLYF*IRVSST
Trigger: AGTGGAGCTCACTCGTATCCAAAAGTATAACAGGTG...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGAGGTTCTCAGACTTGTaGCTTCTGCACCTGTTATAC +
Preference number: 2 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLRFSDL*LLHLLY
Trigger: GTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCT...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTGCGGAGTGGAGCAGATaGACATCACTGAGAATGGTA +
Preference number: 2 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGAEWSR*TSLRMV
Trigger: TACCATTCTCAGTGATGTCCATCTGCTCCACTCCGC...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTCACGGGCAGGTTTCCTaGTGTGTGCACTGGCTTCGG +
Preference number: 2 (lower is better)
Translates to: LERGLYTIATSLCYFTHLHGQVS*CVHWLR
Trigger: CCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTG...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCCAAGCCGCGGAAAGGTaGAGAATGCACGCATTGATG +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIQAAER*RMHALM
Trigger: CATCAATGCGTGCATTCTCCACCTTTCCGCGGCTTG...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTTCACAGACGGGACACTaGCCACTTCTCTCTAATCAC +
Preference number: 2 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGSQTGH*PLLSNH
Trigger: GTGATTAGAGAGAAGTGGCCAGTGTCCCGTCTGTGA...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTTATTGGGCAGGGGGCTaGGCTGCTTCCAGTGTCTGC +
Preference number: 2 (lower is better)
Translates to: LERGLYTIATSLCYFTHLYWAGG*AASSVC
Trigger: GCAGACACTGGAAGCAGCCCAGCCCCCTGCCCAATA...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTCTTCTGGTTAGACACTaGAATACAAACAGACTGCCA +
Preference number: 2 (lower is better)
Translates to: IRLGEISEEGASMQGPCALLVRH*NTNRLP
Trigger: TGGCAGTCTGTTTGTATTTCAGTGTCTAACCAGAAG...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCACCACAAGGGCTCCCTaGAGAAAGCCACTCAGAAAT +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCITTRAP*RKPLRN
Trigger: ATTTCTGAGTGGCTTTCTTCAGGGAGCCCTTGTGGT...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCCTCTCCTCACATTCATaGGGATATCCTGTTTGGGGC +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCILSSHS*GYPVWG
Trigger: GCCCCAAACAGGATATCCTCATGAATGTGAGGAGAG...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTAAGTCCAAAGGCCCCTaGCATCCTCATGCCCAGCTG +
Preference number: 2 (lower is better)
Translates to: LERGLYTIATSLCYFTHLKSKGP*HPHAQL
Trigger: CAGCTGGGCATGAGGATGTCAGGGGCCTTTGGACTT...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCACCTCCTCGGCTAATATaGTTTCTTCTCGGCGATGAC +
Preference number: 2 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSPPRLI*FLLGDD
Trigger: GTCATCGCCGAGAAGAAAGCATATTAGCCGAGGAGG...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCAAAACCACCCCATCTTaGCAGAGTCCCTTGGTCCTT +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIKTTPS*QSPLVL
Trigger: AAGGACCAAGGGACTCTGGCAAGATGGGGTGGTTTT...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGGCTCTCTCCTGTGTGTaGTTTAGGGGAGTTTATGAA +
Preference number: 2 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLALSCV*FRGVYE
Trigger: TTCATAAACTCCCCTAAACCACACACAGGAGAGAGC...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGTGGATACCGCAACGATaGAAAATCAGGCGAGGTACT +
Preference number: 2 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQWIPQR*KIRRGT
Trigger: AGTACCTCGCCTGATTTTCCATCGTTGCGGTATCCA...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGCAACACTTATCACACTaGTTTGAAACCTCACTGCAC +
Preference number: 2 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQQHLSH*FETSLH
Trigger: GTGCAGTGAGGTTTCAAACCAGTGTGATAAGTGTTG...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 90 bp AAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTaGTGGCTTCTGCACCTGTTATACTTTTGGATACGAGTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: KSNGRTMELSSRFSD*WLLHLLYFWIRVSS
Trigger: GGAGCTCACTCGTATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTTTGGATACGAGTaGGCTCCACTTAGCTTCGTT +
Preference number: 2 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQTFGYE*APLSFV
Trigger: AACGAAGCTAAGTGGAGCTCACTCGTATCCAAAAGT...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTCTACAGAGTCTACGGTaGAGGCTGTGTGGAGCGAGT +
Preference number: 2 (lower is better)
Translates to: LERGLYTIATSLCYFTHLLQSLR*RLCGAS
Trigger: ACTCGCTCCACACAGCCTTCACCGTAGACTCTGTAG...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGGGCTTCATGTTTCTGTaGTACATGAGTCTAGTGTCC +
Preference number: 2 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQGFMFL*YMSLVS
Trigger: GGACACTAGACTCATGTAGCACAGAAACATGAAGCC...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTGGCTTCATGTTTCTGTaGTACATGAGTCTAGTGTCC +
Preference number: 2 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGGFMFL*YMSLVS
Trigger: GGACACTAGACTCATGTAGCACAGAAACATGAAGCC...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTGAAATACAAACAGACTaGCAACGAGCTCTGGGCAAA +
Preference number: 2 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGEIQTD*QRALGK
Trigger: TTTGCCCAGAGCTCGTTGGCAGTCTGTTTGTATTTC...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTaGATACGAGTGAGCTCCACT +
Preference number: 2 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLHLLYF*IRVSST
Trigger: AGTGGAGCTCACTCGTATCCAAAAGTATAACAGGTG...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR CAA 90 bp CATCTCATGGTGAAAGACAGTAAGAATGGGTTTTCAGATTTAGGTTaGCTTACCGCTGCTCTGGGGTGGGTGTTTACTACACTGGTGAAC +
Preference number: 2 (lower is better)
Translates to: HLMVKDSKNGFSDLG*LTAALGWVFTTLVN
Trigger: GTTCACCAGTGTAGTAAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTTACTGTCTTTCACCATGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGACTTTTGGATACGAGTaGGCTCCACTTAGCTTCGTT +
Preference number: 2 (lower is better)
Translates to: DETQTEKSNGRTMELSSRTFGYE*APLSFV
Trigger: AACGAAGCTAAGTGGAGCTCACTCGTATCCAAAAGT...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGAAACCCCAAACCAAGTaGTGTCATTTTACACCAAAA +
Preference number: 2 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLKPQTK*CHFTPK
Trigger: TTTTGGTGTAAAATGACAGCACTTGGTTTGGGGTTT...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGGCTCTCTCCTGTGTGTaGTTTAGGGGAGTTTATGAA +
Preference number: 2 (lower is better)
Translates to: DETQTEKSNGRTMELSSRALSCV*FRGVYE
Trigger: TTCATAAACTCCCCTAAACCACACACAGGAGAGAGC...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATTGGATACCGCAACGATaGAAAATCAGGCGAGGTACT +
Preference number: 2 (lower is better)
Translates to: TVVKVLRLVASAPVILLDWIPQR*KIRRGT
Trigger: AGTACCTCGCCTGATTTTCCATCGTTGCGGTATCCA...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCCTTCTGGTTAGACACTaGAATACAAACAGACTGCCA +
Preference number: 2 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCILLVRH*NTNRLP
Trigger: TGGCAGTCTGTTTGTATTTCAGTGTCTAACCAGAAG...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATGGCTTCATGTTTCTGTaGTACATGAGTCTAGTGTCC +
Preference number: 2 (lower is better)
Translates to: TVVKVLRLVASAPVILLDGFMFL*YMSLVS
Trigger: GGACACTAGACTCATGTAGCACAGAAACATGAAGCC...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCAAGACCCTCAAAAACTaGCTTTCCTTCTGCTACCAA +
Preference number: 2 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPKTLKN*LSFCYQ
Trigger: TTGGTAGCAGAAGGAAAGGCAGTTTTTGAGGGTCTT...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTCCTACAGGTACCCTGTaGCAGGCCAAAATGAAAACC +
Preference number: 2 (lower is better)
Translates to: LERGLYTIATSLCYFTHLPTGTL*QAKMKT
Trigger: GGTTTTCATTTTGGCCTGGCACAGGGTACCTGTAGG...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTGAGTCCCTTGGTCCTTaGTTAGCAAAAGCCGTATCC +
Preference number: 2 (lower is better)
Translates to: LERGLYTIATSLCYFTHLESLGP*LAKAVS
Trigger: GGATACGGCTTTTGCTAACCAAGGACCAAGGGACTC...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTCAAATGGCAGGACGATaGAACTGTCGTCAAGGTTCT +
Preference number: 2 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTQMAGR*NCRQGS
Trigger: AGAACCTTGACGACAGTTCCATCGTCCTGCCATTTG...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTCAGACGTTAGCTTCCTaGGCCAGTGTAGACTGTTCA +
Preference number: 2 (lower is better)
Translates to: LERGLYTIATSLCYFTHLQTLAS*ASVDCS
Trigger: TGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTG...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTATGCTGTGGTTTGGTTaGCTACATTTGACTACCACC +
Preference number: 2 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTMLWFG*LHLTTT
Trigger: GGTGGTAGTCAAATGTAGTCAACCAAACCACAGCAT...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTAAACCCCAAACCAAGTaGTGTCATTTTACACCAAAA +
Preference number: 2 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGKPQTK*CHFTPK
Trigger: TTTTGGTGTAAAATGACAGCACTTGGTTTGGGGTTT...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATAGGGATGCTGTGGTTTaGTTGACTACATTTGACTAC +
Preference number: 2 (lower is better)
Translates to: TVVKVLRLVASAPVILLDRDAVV*LTTFDY
Trigger: GTAGTCAAATGTAGTCAACCAAACCACAGCATCCCT...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTGGAAACGCACCCCTGTaGCAAGATGAGAACCAAATT +
Preference number: 2 (lower is better)
Translates to: LERGLYTIATSLCYFTHLGNAPL*QDENQI
Trigger: AATTTGGTTCTCATCTTGCCACAGGGGTGCGTTTCC...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTACTTTTGGATACGAGTaGGCTCCACTTAGCTTCGTT +
Preference number: 2 (lower is better)
Translates to: LERGLYTIATSLCYFTHLTFGYE*APLSFV
Trigger: AACGAAGCTAAGTGGAGCTCACTCGTATCCAAAAGT...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGACCTCCTCGGCTAATATaGTTTCTTCTCGGCGATGAC +
Preference number: 2 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGPPRLI*FLLGDD
Trigger: GTCATCGCCGAGAAGAAAGCATATTAGCCGAGGAGG...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAAAAACCACCCCATCTTaGCAGAGTCCCTTGGTCCTT +
Preference number: 2 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGKTTPS*QSPLVL
Trigger: AAGGACCAAGGGACTCTGGCAAGATGGGGTGGTTTT...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR GCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTGAAATACAAACAGACTaGCAACGAGCTCTGGGCAAA +
Preference number: 2 (lower is better)
Translates to: LERGLYTIATSLCYFTHLEIQTD*QRALGK
Trigger: TTTGCCCAGAGCTCGTTGGCAGTCTGTTTGTATTTC...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAGAGTCCCTTGGTCCTTaGTTAGCAAAAGCCGTATCC +
Preference number: 2 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGESLGP*LAKAVS
Trigger: GGATACGGCTTTTGCTAACCAAGGACCAAGGGACTC...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTAGGGATGCTGTGGTTTaGTTGACTACATTTGACTAC +
Preference number: 2 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTRDAVV*LTTFDY
Trigger: GTAGTCAAATGTAGTCAACCAAACCACAGCATCCCT...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTCACCTGTTATACTTTTaGATACGAGTGAGCTCCACT +
Preference number: 2 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTHLLYF*IRVSST
Trigger: AGTGGAGCTCACTCGTATCCAAAAGTATAACAGGTG...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR TCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAATGCTGTGGTTTGGTTaGCTACATTTGACTACCACC +
Preference number: 2 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGMLWFG*LHLTTT
Trigger: GGTGGTAGTCAAATGTAGTCAACCAAACCACAGCAT...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAGCTCTCTCCTGTGTGTaGTTTAGGGGAGTTTATGAA +
Preference number: 2 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGALSCV*FRGVYE
Trigger: TTCATAAACTCCCCTAAACCACACACAGGAGAGAGC...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR CAA 90 bp AAGGAAAGATGTGTATCTCCAGCACTTTTCTATCTGAACTCCTCCTaGACTGCTTTTCAATTTGTTTGCTTGAAGGCCATAAATACAACC +
Preference number: 2 (lower is better)
Translates to: KERCVSPALFYLNSS*TAFQFVCLKAINTT
Trigger: GGTTGTATTTATGGCCTTCAAGCAAACAAATTGAAAAGCAGTCAAGGAGGAGTTCAGATAGAAAAGTGCTGGAGATACACATCTTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAAGGGATGCTGTGGTTTaGTTGACTACATTTGACTAC +
Preference number: 2 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGRDAVV*LTTFDY
Trigger: GTAGTCAAATGTAGTCAACCAAACCACAGCATCCCT...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGACACCTGTTATACTTTTaGATACGAGTGAGCTCCACT +
Preference number: 2 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGHLLYF*IRVSST
Trigger: AGTGGAGCTCACTCGTATCCAAAAGTATAACAGGTG...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCGAGCGGCTGCCCAGCTaGGGCGTCCCAAGGTCGGAT +
Preference number: 3 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSERLPS*GVPRSD
Trigger: ATCCGACCTTGGGACGCCCAAGCTGGGCAGCCGCTC...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp CAAGCTGGCAGAAGGGAAGAGCCAGTGCAGGAGACCTaGCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGG +
Preference number: 3 (lower is better)
Translates to: QAGRREEPVQET*PRDPCDPPLSR
Trigger: CCTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTCCCTTCTGCCAGCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 72 bp GCTGGGTTGGGATGGGGGAGGTCCCTCGTGCCAACCTaGGCAGTGCGTGAGACCCACTCCCCAGACCAGCCC +
Preference number: 3 (lower is better)
Translates to: AGLGWGRSLVPT*AVRETHSPDQP
Trigger: GGGCTGGTCTGGGGAGTGGGTCTCACGCACTGCTCAGGTTGGCACGAGGGACCTCCCCCATCCCAACCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp AGGGACGGGCCTGCAGCCAAGCACGGCGACCTGGGGTaGTCTCCAGCAAGCTCCGATCTCAGACAGGAGGAG +
Preference number: 3 (lower is better)
Translates to: RDGPAAKHGDLG*SPASSDLRQEE
Trigger: CTCCTCCTGTCTGAGATCGGAGCTTGCTGGAGAGCACCCCAGGTCGCCGTGCTTGGCTGCAGGCCCGTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp GCAAGGCCCAGTGCACGCGTGAGTCACAGCGGCTCATaGCAACGGCAAGGGGGCATCTTAAGGGAGGGGCGC +
Preference number: 3 (lower is better)
Translates to: ARPSARVSHSGS*QRQGGILREGR
Trigger: GCGCCCCTCCCTTAAGATGCCCCCTTGCCGTTGCCATGAGCCGCTGTGACTCACGCGTGCACTGGGCCTTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp GAGAGAGGGACGGGCCTGCAGCCAAGCACGGCGACCTaGGGTGCTCTCCAGCAAGCTCCGATCTCAGACAGG +
Preference number: 3 (lower is better)
Translates to: ERGTGLQPSTAT*GALQQAPISDR
Trigger: CCTGTCTGAGATCGGAGCTTGCTGGAGAGCACCCCAGGTCGCCGTGCTTGGCTGCAGGCCCGTCCCTCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp TGGGCGCCACGGGGACCTAGAGCGCCTACGGCACATTaGAGGCTGCAGGTTGAGCAGGCCACTCTTGTGGGG +
Preference number: 3 (lower is better)
Translates to: WAPRGPRAPTAH*RLQVEQATLVG
Trigger: CCCCACAAGAGTGGCCTGCTCAACCTGCAGCCTCCAATGTGCCGTAGGCGCTCTAGGTCCCCGTGGCGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp ATGCTGAGAGCCCTGCTGGGACCCTTGGGGCTGGGTTaGGATGGGGGAGGTCCCTCGTGCCAACCTGAGCAG +
Preference number: 3 (lower is better)
Translates to: MLRALLGPLGLG*DGGGPSCQPEQ
Trigger: CTGCTCAGGTTGGCACGAGGGACCTCCCCCATCCCAACCCAGCCCCAAGGGTCCCAGCAGGGCTCTCAGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGATGAGGATATCCTGTTaGGGGCACATGGAGCGGCTG +
Preference number: 3 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQMRISC*GHMERL
Trigger: CAGCCGCTCCATGTGCCCCAAACAGGATATCCTCAT...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp GCCCAGCTTGGGCGTCCCAAGGTCGGATGCCACAGCTaGCTGCTGGTCTCACCTAGCAGCCTTAGGCCTGAG +
Preference number: 3 (lower is better)
Translates to: AQLGRPKVGCHS*LLVSPSSLRPE
Trigger: CTCAGGCCTAAGGCTGCTAGGTGAGACCAGCAGGCAGCTGTGGCATCCGACCTTGGGACGCCCAAGCTGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp CTGAACGCGGGGGTGCAGATGTGTCCAGATCACCCATaGGGTTACACAGGCCGCTCGTGGGCCTCCCTCAGC +
Preference number: 3 (lower is better)
Translates to: LNAGVQMCPDHP*GYTGRSWASLS
Trigger: GCTGAGGGAGGCCCACGAGCGGCCTGTGTAACCCCATGGGTGATCTGGACACATCTGCACCCCCGCGTTCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGGGTGCTTGCCTAGAGTaGCAGAGGAATCCTCTGGAA +
Preference number: 3 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQGACLE*QRNPLE
Trigger: TTCCAGAGGATTCCTCTGCAACTCTAGGCAAGCACC...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 72 bp GCTGGGCGGGGGAAACCATCTGCCCGTCCCAGCACCTaGGGTCAGAATCACAGAGTACTGTCCCTGCGGGGT +
Preference number: 3 (lower is better)
Translates to: AGRGKPSARPST*GQNHRVLSLRG
Trigger: ACCCCGCAGGGACAGTACTCTGTGATTCTGACCTCAGGTGCTGGGACGGGCAGATGGTTTCCCCCGCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 72 bp CAGGCTGTGGGGGAGAGGGAAGGGTCGTCTTGGCCCTaGTCAGCACCAGCGAACAGCACGAGGGCAGAACTC +
Preference number: 3 (lower is better)
Translates to: QAVGEREGSSWP*SAPANSTRAEL
Trigger: GAGTTCTGCCCTCGTGCTGTTCGCTGGTGCTGATCAGGGCCAAGACGACCCTTCCCTCTCCCCCACAGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp GAACCAAATTCCAAGCTGGCAGAAGGGAAGAGCCAGTaGAGGAGACCTGCCCCCGGGACCCGTGCGACCCTC +
Preference number: 3 (lower is better)
Translates to: EPNSKLAEGKSQ*RRPAPGTRATL
Trigger: GAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTCCCTTCTGCCAGCTTGGAATTTGGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp TATCCTGTTTGGGGCACATGGAGCGGCTGCCCAGCTTaGGCGTCCCAAGGTCGGATGCCACAGCTGCCTGCT +
Preference number: 3 (lower is better)
Translates to: YPVWGTWSGCPA*ASQGRMPQLPA
Trigger: AGCAGGCAGCTGTGGCATCCGACCTTGGGACGCCCAAGCTGGGCAGCCGCTCCATGTGCCCCAAACAGGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACGGGAGTCATGGCAGCTaGTGCTGGGGGCCAGGAAGG +
Preference number: 3 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDGSHGS*CWGPGR
Trigger: CCTTCCTGGCCCCCAGCACAAGCTGCCATGACTCCC...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGACTTATCACACTGGTTaGAAACCTCACTGCACCCTG +
Preference number: 3 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQTYHTG*KPHCTL
Trigger: CAGGGTGCAGTGAGGTTTCAAACCAGTGTGATAAGT...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 72 bp CCCTCCACTCCCCGCCAAGTTCAGTCTCCGCGAAGCTaGACGCGGGGGTGCAGATGTGTCCAGATCACCCAT +
Preference number: 3 (lower is better)
Translates to: PSTPRQVQSPRS*TRGCRCVQITH
Trigger: ATGGGTGATCTGGACACATCTGCACCCCCGCGTTCAGCTTCGCGGAGACTGAACTTGGCGGGGAGTGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 72 bp TCTCCAGCCACCTGTGTACCCTCAAAACAGCCATGCTaGGAGCCCTGCTGGGACCCTTGGGGCTGGGTTGGG +
Preference number: 3 (lower is better)
Translates to: SPATCVPSKQPC*EPCWDPWGWVG
Trigger: CCCAACCCAGCCCCAAGGGTCCCAGCAGGGCTCTCAGCATGGCTGTTTTGAGGGTACACAGGTGGCTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp AGCTTGGGCGTCCCAAGGTCGGATGCCACAGCTGCCTaGTGGTCTCACCTAGCAGCCTTAGGCCTGAGCTCT +
Preference number: 3 (lower is better)
Translates to: SLGVPRSDATAA*WSHLAALGLSS
Trigger: AGAGCTCAGGCCTAAGGCTGCTAGGTGAGACCAGCAGGCAGCTGTGGCATCCGACCTTGGGACGCCCAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp GGAGCAAGGACCTCATTGATGCTGTTCCCCGCCATGTaGAGGGCAGGGCACTGGCAAGCTGAGAGAGGAGGG +
Preference number: 3 (lower is better)
Translates to: GARTSLMLFPAM*RAGHWQAERGG
Trigger: CCCTCCTCTCTCAGCTTGCCAGTGCCCTGCCCTCCACATGGCGGGGAACAGCATCAATGAGGTCCTTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp GAACATCCTAAGTGCAGGGAGGGAGAGTTGGTGTCCTaGGCGCCACGGGGACCTAGAGCGCCTACGGCACAT +
Preference number: 3 (lower is better)
Translates to: EHPKCREGELVS*APRGPRAPTAH
Trigger: ATGTGCCGTAGGCGCTCTAGGTCCCCGTGGCGCCCAGGACACCAACTCTCCCTCCCTGCACTTAGGATGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGTTGGTGGTAATTAGCTaGAAAGTGGGAACGAGAGTG +
Preference number: 3 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQLVVIS*KVGTRV
Trigger: CACTCTCGTTCCCACTTTCAAGCTAATTACCACCAA...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 72 bp GCACCTGGACTGTCCTTCCTCAAGTCCAAAGGCCCCTaGCATCCTCATGCCCAGCTGCTGACCGAGTGGGCT +
Preference number: 3 (lower is better)
Translates to: APGLSFLKSKGP*HPHAQLLTEWA
Trigger: AGCCCACTCGGTCAGCAGCTGGGCATGAGGATGTCAGGGGCCTTTGGACTTGAGGAAGGACAGTCCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp CCTTGTGCAGGCGGTGAGGGACGGAAGCAGAGCACATaGCGTGCCGGGAGGTTTGGGGTTTGCTTTCCAAAC +
Preference number: 3 (lower is better)
Translates to: PCAGGEGRKQST*RAGRFGVCFPN
Trigger: GTTTGGAAAGCAAACCCCAAACCTCCCGGCACGGCATGTGCTCTGCTTCCGTCCCTCACCGCCTGCACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp TCAGAATCACAGAGTACTGTCCCTGCGGGGTGTTTCTaGTGCAGCCAGGTCTGCACCACACCCCTCCACTCC +
Preference number: 3 (lower is better)
Translates to: SESQSTVPAGCF*CSQVCTTPLHS
Trigger: GGAGTGGAGGGGTGTGGTGCAGACCTGGCTGCAGCAGAAACACCCCGCAGGGACAGTACTCTGTGATTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp GCAGCATCCCAGGGGCCAGCGATCCAGTTCACTCTCTaGCTGTGTCGGAAGGACCAGTCTGAGGACTGTTTC +
Preference number: 3 (lower is better)
Translates to: AASQGPAIQFTL*LCRKDQSEDCF
Trigger: GAAACAGTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCCCTGGGATGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp AGGCTGGAGGACAGTGTCAGCCACGGGCAGGTTTCCTaGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTC +
Preference number: 3 (lower is better)
Translates to: RLEDSVSHGQVS*CVHWLRSHQCF
Trigger: GAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGGCTGACACTGTCCTCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp CATTTCCAGAACATCCTAAGTGCAGGGAGGGAGAGTTaGTGTCCTGGGCGCCACGGGGACCTAGAGCGCCTA +
Preference number: 3 (lower is better)
Translates to: HFQNILSAGRES*CPGRHGDLERL
Trigger: TAGGCGCTCTAGGTCCCCGTGGCGCCCAGGACACCAACTCTCCCTCCCTGCACTTAGGATGTTCTGGAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGCTGAGAACCCTGCGATaGGCGAGTGACCCGCTGCCT +
Preference number: 3 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPLRTLR*ASDPLP
Trigger: AGGCAGCGGGTCACTCGCCAATCGCAGGGTTCTCAG...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGGAGGGAAGGGTCGTCTaGGCCCTGATCAGCACCAGC +
Preference number: 3 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPEGRVV*ALISTS
Trigger: GCTGGTGCTGATCAGGGCCAAGACGACCCTTCCCTC...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 72 bp GCAATCACATCGTGGCAATCACCGGCGCGTGCCGCGTaGCTACCTCCTCGGCTAATATGCTTTCTTCTCGGC +
Preference number: 3 (lower is better)
Translates to: AITSWQSPARAA*LPPRLICFLLG
Trigger: GCCGAGAAGAAAGCATATTAGCCGAGGAGGTAGTCACGCGGCACGCGCCGGTGATTGCCACGATGTGATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR TCA 72 bp ACGAGGCCGGAACCATGCAGGCCTCATCAGGCTGGGTaGAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCC +
Preference number: 3 (lower is better)
Translates to: TRPEPCRPHQAG*NLRRGSFNARP
Trigger: GGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCCGGCCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 72 bp AGTTCTAGAAAAGTCTCAACGACCTTGTGCAGGCGGTaGGGGACGGAAGCAGAGCACATGCCGTGCCGGGAG +
Preference number: 3 (lower is better)
Translates to: SSRKVSTTLCRR*GTEAEHMPCRE
Trigger: CTCCCGGCACGGCATGTGCTCTGCTTCCGTCCCTCACCGCCTGCACAAGGTCGTTGAGACTTTTCTAGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp GTCCTTCCTCAAGTCCAAAGGCCCCTGACATCCTCATaGCCAGCTGCTGACCGAGTGGGCTTCCAGTGTCTT +
Preference number: 3 (lower is better)
Translates to: VLPQVQRPLTSS*PAADRVGFQCL
Trigger: AAGACACTGGAAGCCCACTCGGTCAGCAGCTGGGCATGAGGATGTCAGGGGCCTTTGGACTTGAGGAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp GGGACGGAAGCAGAGCACATGCCGTGCCGGGAGGTTTaGGGTTTGCTTTCCAAACACCTTTGCCTCCTGAGT +
Preference number: 3 (lower is better)
Translates to: GTEAEHMPCREV*GLLSKHLCLLS
Trigger: ACTCAGGAGGCAAAGGTGTTTGGAAAGCAAACCCCAAACCTCCCGGCACGGCATGTGCTCTGCTTCCGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp GCACCCCTGTGGCAAGATGAGAACCAAATTCCAAGCTaGCAGAAGGGAAGAGCCAGTGCAGGAGACCTGCCC +
Preference number: 3 (lower is better)
Translates to: APLWQDENQIPS*QKGRASAGDLP
Trigger: GGGCAGGTCTCCTGCACTGGCTCTTCCCTTCTGCCAGCTTGGAATTTGGTTCTCATCTTGCCACAGGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTAGTTGCCCCTTCTCCTaGTTCCTCGCCTCCCCTCCC +
Preference number: 3 (lower is better)
Translates to: IRLGEISEEGASMQGPCASCPFS*FLASPP
Trigger: GGGAGGGGAGGCGAGGAACAAGGAGAAGGGGCAACT...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 72 bp TGGGAGACAGGACACTGCACCTGGTTTTGGGGCCAGTaGCTCAGGAACTTGTCACTTGCTCACCCTCGAGCT +
Preference number: 3 (lower is better)
Translates to: WETGHCTWFWGQ*LRNLSLAHPRA
Trigger: AGCTCGAGGGTGAGCAAGTGACAAGTTCCTGAGTCACTGGCCCCAAAACCAGGTGCAGTGTCCTGTCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 72 bp CTCTCTCCTGTGTCTGAGAACCCTGCGATTGGCGAGTaGCCCGCTGCCTTCTCCCTCCTTTCCAGTGCATAT +
Preference number: 3 (lower is better)
Translates to: LSPVSENPAIGE*PAAFSLLSSAY
Trigger: ATATGCACTGGAAAGGAGGGAGAAGGCAGCGGGTCACTCGCCAATCGCAGGGTTCTCAGACACAGGAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp GAGCTTCAATGCAAGGCCCTTGTGCTGAAAAGCCACTaGCGAGAACTGGCCTGTGCACTAGAGGCTCTGCAG +
Preference number: 3 (lower is better)
Translates to: ELQCKALVLKSH*RELACALEALQ
Trigger: CTGCAGAGCCTCTAGTGCACAGGCCAGTTCTCGGCAGTGGCTTTTCAGCACAAGGGCCTTGCATTGAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp GAAGCAGCTTCTAAATGCACACTTTGCCACCCACCATaGAACTGCCCCACCCCTCTCCAGCCACCTGTGTAC +
Preference number: 3 (lower is better)
Translates to: EAASKCTLCHPP*NCPTPLQPPVY
Trigger: GTACACAGGTGGCTGGAGAGGGGTGGGGCAGTTGCATGGTGGGTGGCAAAGTGTGCATTTAGAAGCTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp GCTTGCCTAGAGTTGCAGAGGAATCCTCTGGAAGGATaGCAGGGCCAGCTGAGCCTAGGGGTCTGTCTTTCT +
Preference number: 3 (lower is better)
Translates to: ACLELQRNPLEG*QGQLSLGVCLS
Trigger: AGAAAGACAGACCCCTAGGCTCAGCTGGCCCTGCCATCCTTCCAGAGGATTCCTCTGCAACTCTAGGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACCCAGGTTTTGTGATTTaGTTTGGGGTGAGAGTGGGT +
Preference number: 3 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDPGFVI*FGVRVG
Trigger: ACCCACTCTCACCCCAAACAAAATCACAAAACCTGG...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGAGTTGCCCCTTCTCCTaGTTCCTCGCCTCCCCTCCC +
Preference number: 3 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLSCPFS*FLASPP
Trigger: GGGAGGGGAGGCGAGGAACAAGGAGAAGGGGCAACT...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACGCACCTGTTATACTTTaGGATACGAGTGAGCTCCAC +
Preference number: 3 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDAPVIL*DTSELH
Trigger: GTGGAGCTCACTCGTATCCAAAAGTATAACAGGTGC...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTGGGAGTCATGGCAGCTaGTGCTGGGGGCCAGGAAGG +
Preference number: 3 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGGSHGS*CWGPGR
Trigger: CCTTCCTGGCCCCCAGCACAAGCTGCCATGACTCCC...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCACATTGTGCACACACTaGGGAGACAGGACACTGCAC +
Preference number: 3 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTTLCTH*GDRTLH
Trigger: GTGCAGTGTCCTGTCTCCCAAGTGTGTGCACAATGT...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCACTTATCACACTGGTTaGAAACCTCACTGCACCCTG +
Preference number: 3 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCTYHTG*KPHCTL
Trigger: CAGGGTGCAGTGAGGTTTCAAACCAGTGTGATAAGT...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGGCCGTGCCGGGAGGTTaGGGGTTTGCTTTCCAAACA +
Preference number: 3 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPAVPGG*GFAFQT
Trigger: TGTTTGGAAAGCAAACCCCAAACCTCCCGGCACGGC...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 72 bp AGTCCAAAGGCCCCTGACATCCTCATGCCCAGCTGCTaGCCGAGTGGGCTTCCAGTGTCTTCTGTTTACCAA +
Preference number: 3 (lower is better)
Translates to: SPKAPDILMPSC*PSGLPVSSVYQ
Trigger: TTGGTAAACAGAAGACACTGGAAGCCCACTCGGTCAGCAGCTGGGCATGAGGATGTCAGGGGCCTTTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 72 bp CGGCTGCCCTTTAGGAAACGCACCCCTGTGGCAAGATaGGAACCAAATTCCAAGCTGGCAGAAGGGAAGAGC +
Preference number: 3 (lower is better)
Translates to: RLPFRKRTPVAR*EPNSKLAEGKS
Trigger: GCTCTTCCCTTCTGCCAGCTTGGAATTTGGTTCTCATCTTGCCACAGGGGTGCGTTTCCTAAAGGGCAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp GCAGCTGTTCCCAACAGCTGGTGTGTTAAGGGGGTTTaGTCCACTGGGAAGATTCCCCAACACACTCATGCC +
Preference number: 3 (lower is better)
Translates to: AAVPNSWCVKGV*STGKIPQHTHA
Trigger: GGCATGAGTGTGTTGGGGAATCTTCCCAGTGGAGCAAACCCCCTTAACACACCAGCTGTTGGGAACAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp GCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATaGACCTGGACTGTCCTTCCTCAAGTCCAAAGGCCC +
Preference number: 3 (lower is better)
Translates to: ASSVCMRPIRIP*TWTVLPQVQRP
Trigger: GGGCCTTTGGACTTGAGGAAGGACAGTCCAGGTGCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp GATGACGAGGCCGGAACCATGCAGGCCTCATCAGGCTaGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAG +
Preference number: 3 (lower is better)
Translates to: DDEAGTMQASSG*VKSQKRELQCK
Trigger: CTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCCGGCCTCGTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp AGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTTaGGGGAGTGCTCCCTACAGGTACCCTGTGCCAGGC +
Preference number: 3 (lower is better)
Translates to: RSLYHMVSPSSG*GSAPYRYPVPG
Trigger: GCCTGGCACAGGGTACCTGTAGGGAGCACTCCCCCAACCTGAGGATGGTGAAACCATATGATAGAGACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp AGCTGCTCCGGCTGCCCTTTAGGAAACGCACCCCTGTaGCAAGATGAGAACCAAATTCCAAGCTGGCAGAAG +
Preference number: 3 (lower is better)
Translates to: SCSGCPLGNAPL*QDENQIPSWQK
Trigger: CTTCTGCCAGCTTGGAATTTGGTTCTCATCTTGCCACAGGGGTGCGTTTCCTAAAGGGCAGCCGGAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTTCGCGTCCCCATCCCTaGTGCCACCAGGACAAGGGT +
Preference number: 3 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGSRPHP*CHQDKG
Trigger: ACCCTTGTCCTGGTGGCACAAGGGATGGGGACGCGA...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCGGGAGTCATGGCAGCTaGTGCTGGGGGCCAGGAAGG +
Preference number: 3 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIGSHGS*CWGPGR
Trigger: CCTTCCTGGCCCCCAGCACAAGCTGCCATGACTCCC...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGGCCGTGCCGGGAGGTTaGGGGTTTGCTTTCCAAACA +
Preference number: 3 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQAVPGG*GFAFQT
Trigger: TGTTTGGAAAGCAAACCCCAAACCTCCCGGCACGGC...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp AATGTGGATTTCCTCTCATTTCCAGAACATCCTAAGTaGAGGGAGGGAGAGTTGGTGTCCTGGGCGCCACGG +
Preference number: 3 (lower is better)
Translates to: NVDFLSFPEHPK*REGELVSWAPR
Trigger: CCGTGGCGCCCAGGACACCAACTCTCCCTCCCTGCACTTAGGATGTTCTGGAAATGAGAGGAAATCCACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp AGGGGAAGCTACATCGTTGCCAGGCTTCCCACCTCCTaGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAA +
Preference number: 3 (lower is better)
Translates to: RGSYIVARLPTS*GRNVDFLSFPE
Trigger: TTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGCCTGGCAACGATGTAGCTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp AGTGTCTGCATGAGGCCCATTAGGATTCCATGCACCTaGACTGTCCTTCCTCAAGTCCAAAGGCCCCTGACA +
Preference number: 3 (lower is better)
Translates to: SVCMRPIRIPCT*TVLPQVQRPLT
Trigger: TGTCAGGGGCCTTTGGACTTGAGGAAGGACAGTCCAGGTGCATGGAATCCTAATGGGCCTCATGCAGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCAGTTGCCCCTTCTCCTaGTTCCTCGCCTCCCCTCCC +
Preference number: 3 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPSCPFS*FLASPP
Trigger: GGGAGGGGAGGCGAGGAACAAGGAGAAGGGGCAACT...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTCTGAGAACCCTGCGATaGGCGAGTGACCCGCTGCCT +
Preference number: 3 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFLRTLR*ASDPLP
Trigger: AGGCAGCGGGTCACTCGCCAATCGCAGGGTTCTCAG...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 72 bp CCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTaGGGACTGTTTCTTAGTGATCCAGCTCCAAGGTGT +
Preference number: 3 (lower is better)
Translates to: PVHSLPVSEGPV*GLFLSDPAPRC
Trigger: ACACCTTGGAGCTGGATCACTAAGAAACAGTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp CCTTCTGCTACCAAAACTTGGGCCCTAGAAAGTGGCTaGGGAGTGGAGCAGATGGACATCACTGAGAATGGT +
Preference number: 3 (lower is better)
Translates to: PSATKTWALESG*GVEQMDITENG
Trigger: ACCATTCTCAGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGTAGCAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp GTGACTCAGGAACTTGTCACTTGCTCACCCTCGAGCTaGTCATTTCCTGGGATGAAACAGAGAGAGGGACCA +
Preference number: 3 (lower is better)
Translates to: VTQELVTCSPSS*SFPGMKQREGP
Trigger: TGGTCCCTCTCTCTGTTTCATCCCAGGAAATGAGCAGCTCGAGGGTGAGCAAGTGACAAGTTCCTGAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp CTGGTTTTGGGGCCAGTGACTCAGGAACTTGTCACTTaGTCACCCTCGAGCTGCTCATTTCCTGGGATGAAA +
Preference number: 3 (lower is better)
Translates to: LVLGPVTQELVT*SPSSCSFPGMK
Trigger: TTTCATCCCAGGAAATGAGCAGCTCGAGGGTGAGCAAGTGACAAGTTCCTGAGTCACTGGCCCCAAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp ACAGATGAGGAAAAAGAGCCCAGGAAGCTGGGTGCTTaGCTAGAGTTGCAGAGGAATCCTCTGGAAGGATGG +
Preference number: 3 (lower is better)
Translates to: TDEEKEPRKLGA*LELQRNPLEGW
Trigger: CCATCCTTCCAGAGGATTCCTCTGCAACTCTAGGCAAGCACCCAGCTTCCTGGGCTCTTTTTCCTCATCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp GATCCAGCTCCAAGGTGTACTCTAAGGAGATACACCTaGGCCCCTTCTCTCTCCTGCATAATGGGAGGAAAG +
Preference number: 3 (lower is better)
Translates to: DPAPRCTLRRYT*APSLSCIMGGK
Trigger: CTTTCCTCCCATTATGCAGGAGAGAGAAGGGGCGCAGGTGTATCTCCTTAGAGTACACCTTGGAGCTGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp AGCCACTCAGAAATCCAAGCGCAAGCCGCGGAAAGGTaGAGAATGCACGCATTGATGCCAAAGGCCCTTATT +
Preference number: 3 (lower is better)
Translates to: SHSEIQAQAAER*RMHALMPKALI
Trigger: AATAAGGGCCTTTGGCATCAATGCGTGCATTCTCCACCTTTCCGCGGCTTGCGCTTGGATTTCTGAGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp GTCCGATGTGGACTTCGACAAGGAGTCTCTATCATATaGTTTCACCATCCTCAGGTTGGGGGAGTGCTCCCT +
Preference number: 3 (lower is better)
Translates to: VRCGLRQGVSII*FHHPQVGGVLP
Trigger: AGGGAGCACTCCCCCAACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATAGTTGCCCCTTCTCCTaGTTCCTCGCCTCCCCTCCC +
Preference number: 3 (lower is better)
Translates to: TVVKVLRLVASAPVILLDSCPFS*FLASPP
Trigger: GGGAGGGGAGGCGAGGAACAAGGAGAAGGGGCAACT...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGATCCAAGTGTTCCGTTaGGTAGAGGGGAAATGTACT +
Preference number: 3 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAIQVFR*VEGKCT
Trigger: AGTACATTTCCCCTCTACCAAACGGAACACTTGGAT...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTACATTGTGCACACACTaGGGAGACAGGACACTGCAC +
Preference number: 3 (lower is better)
Translates to: IRLGEISEEGASMQGPCATLCTH*GDRTLH
Trigger: GTGCAGTGTCCTGTCTCCCAAGTGTGTGCACAATGT...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCCGTCTGAGGCAGCGGTaGGAAATAAATTACATTTCC +
Preference number: 3 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTRLRQR*EINYIS
Trigger: GGAAATGTAATTTATTTCCAACCGCTGCCTCAGACG...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGCCAGGTTTTGTGATTTaGTTTGGGGTGAGAGTGGGT +
Preference number: 3 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPPGFVI*FGVRVG
Trigger: ACCCACTCTCACCCCAAACAAAATCACAAAACCTGG...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGATCCAAGTGTTCCGTTaGGTAGAGGGGAAATGTACT +
Preference number: 3 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLIQVFR*VEGKCT
Trigger: AGTACATTTCCCCTCTACCAAACGGAACACTTGGAT...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCTCAAGGTTCTCAGACTaGTGGCTTCTGCACCTGTTA +
Preference number: 3 (lower is better)
Translates to: ASHLLGQECGFPLISRTSSRFSD*WLLHLL
Trigger: TAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGA...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 72 bp TTGCTTTCCAAACACCTTTGCCTCCTGAGTAGTTGCTaGGGCCTGATCATACCGCATCTCAGGGGAAGCTAC +
Preference number: 3 (lower is better)
Translates to: LLSKHLCLLSSC*GLIIPHLRGSY
Trigger: GTAGCTTCCCCTGAGATGCGGTATGATCAGGCCTCAGCAACTACTCAGGAGGCAAAGGTGTTTGGAAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCATCCAAGTGTTCCGTTaGGTAGAGGGGAAATGTACT +
Preference number: 3 (lower is better)
Translates to: ASHLLGQECGFPLISRTSIQVFR*VEGKCT
Trigger: AGTACATTTCCCCTCTACCAAACGGAACACTTGGAT...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGATCCAAGTGTTCCGTTaGGTAGAGGGGAAATGTACT +
Preference number: 3 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPIQVFR*VEGKCT
Trigger: AGTACATTTCCCCTCTACCAAACGGAACACTTGGAT...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTGCACCTGTTATACTTTaGGATACGAGTGAGCTCCAC +
Preference number: 3 (lower is better)
Translates to: IRLGEISEEGASMQGPCAAPVIL*DTSELH
Trigger: GTGGAGCTCACTCGTATCCAAAAGTATAACAGGTGC...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCTCAGGAACTTGTCACTaGCTCACCCTCGAGCTGCTC +
Preference number: 3 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCISGTCH*LTLELL
Trigger: GAGCAGCTCGAGGGTGAGCAAGTGACAAGTTCCTGA...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGCGTCTGAGGCAGCGGTaGGAAATAAATTACATTTCC +
Preference number: 3 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPRLRQR*EINYIS
Trigger: GGAAATGTAATTTATTTCCAACCGCTGCCTCAGACG...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGCCCTTATTTAGCTTTTaGGGGAAGGATGAGGGTGAC +
Preference number: 3 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLPLFSF*GKDEGD
Trigger: GTCACCCTCATCCTTCCCCAAAAAGCTAAATAAGGG...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp TGCCTTCTCCCTCCTTTCCAGTGCATATATACATTGTaGACACACTTGGGAGACAGGACACTGCACCTGGTT +
Preference number: 3 (lower is better)
Translates to: CLLPPFQCIYTL*THLGDRTLHLV
Trigger: AACCAGGTGCAGTGTCCTGTCTCCCAAGTGTGTGCACAATGTATATATGCACTGGAAAGGAGGGAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp ACTGCTATTTACAGAAACAGAAAACTGGCTGCAAGGTaGGTTGGCCTTCCCTGCCCCTGCCTAGAAATGCAT +
Preference number: 3 (lower is better)
Translates to: TAIYRNRKLAAR*VGLPCPCLEMH
Trigger: ATGCATTTCTAGGCAGGGGCAGGGAAGGCCAACCCACCTTGCAGCCAGTTTTCTGTTTCTGTAAATAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGATCCAAGTGTTCCGTTaGGTAGAGGGGAAATGTACT +
Preference number: 3 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQIQVFR*VEGKCT
Trigger: AGTACATTTCCCCTCTACCAAACGGAACACTTGGAT...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTCGGGAGGTTTGGGGTTaGCTTTCCAAACACCTTTGC +
Preference number: 3 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFREVWG*LSKHLC
Trigger: GCAAAGGTGTTTGGAAAGCAAACCCCAAACCTCCCG...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR TCA 72 bp TTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTaGAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTC +
Preference number: 3 (lower is better)
Translates to: FMLYLCPLQSLR*RLCGASVSSGL
Trigger: GAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR GCA 72 bp GGTTTGCTCCACTGGGAAGATTCCCCAACACACTCATaGCTTGTTTGGTTCCTTTCTTTCACCTGCATCTCA +
Preference number: 3 (lower is better)
Translates to: GLLHWEDSPTHS*LVWFLSFTCIS
Trigger: TGAGATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTCCCAGTGGAGCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGCCAGGTTTTGTGATTTaGTTTGGGGTGAGAGTGGGT +
Preference number: 3 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQPGFVI*FGVRVG
Trigger: ACCCACTCTCACCCCAAACAAAATCACAAAACCTGG...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAAGTTGCCCCTTCTCCTaGTTCCTCGCCTCCCCTCCC +
Preference number: 3 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGSCPFS*FLASPP
Trigger: GGGAGGGGAGGCGAGGAACAAGGAGAAGGGGCAACT...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGGCACCTGTTATACTTTaGGATACGAGTGAGCTCCAC +
Preference number: 3 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQAPVIL*DTSELH
Trigger: GTGGAGCTCACTCGTATCCAAAAGTATAACAGGTGC...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTTCAAGGTTCTCAGACTaGTGGCTTCTGCACCTGTTA +
Preference number: 3 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGSRFSD*WLLHLL
Trigger: TAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGA...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCTTCTGCTACCAAAACTaGGGCCCTAGAAAGTGGCTG +
Preference number: 3 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIFCYQN*GPRKWL
Trigger: CAGCCACTTTCTAGGGCCCAAGTTTTGGTAGCAGAA...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGCACCTGTTATACTTTaGGATACGAGTGAGCTCCAC +
Preference number: 3 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSAPVIL*DTSELH
Trigger: GTGGAGCTCACTCGTATCCAAAAGTATAACAGGTGC...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTTTGGTGGTAATTAGCTaGAAAGTGGGAACGAGAGTG +
Preference number: 3 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGLVVIS*KVGTRV
Trigger: CACTCTCGTTCCCACTTTCAAGCTAATTACCACCAA...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTCCCTTATTTAGCTTTTaGGGGAAGGATGAGGGTGAC +
Preference number: 3 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFPLFSF*GKDEGD
Trigger: GTCACCCTCATCCTTCCCCAAAAAGCTAAATAAGGG...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCCCCTTATTTAGCTTTTaGGGGAAGGATGAGGGTGAC +
Preference number: 3 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIPLFSF*GKDEGD
Trigger: GTCACCCTCATCCTTCCCCAAAAAGCTAAATAAGGG...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCTTTTCAGATTTAGGTTaGCTTACCGCTGCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIFSDLG*LTAALG
Trigger: CCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAA...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp AGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTaGCTTCTGCACCTGTTATACTTTTGGATACGAGTG +
Preference number: 3 (lower is better)
Translates to: RTMELSSRFSDL*LLHLLYFWIRV
Trigger: CACTCGTATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp GCACGCATTGATGCCAAAGGCCCTTATTTAGCTTTTTaGGGAAGGATGAGGGTGACAGTCATTCAAGATGTG +
Preference number: 3 (lower is better)
Translates to: ARIDAKGPYLAF*GRMRVTVIQDV
Trigger: CACATCTTGAATGACTGTCACCCTCATCCTTCCCCAAAAAGCTAAATAAGGGCCTTTGGCATCAATGCGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp ATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATaGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTC +
Preference number: 3 (lower is better)
Translates to: MKRRLKNQMAGR*NCRQGSQTCGF
Trigger: GAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTTTCTGCTACCAAAACTaGGGCCCTAGAAAGTGGCTG +
Preference number: 3 (lower is better)
Translates to: LERGLYTIATSLCYFTHLFCYQN*GPRKWL
Trigger: CAGCCACTTTCTAGGGCCCAAGTTTTGGTAGCAGAA...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTAGGAAAGCTGACATTTaGCTGAAAAGCAACCTAATG +
Preference number: 3 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGRKADI*LKSNLM
Trigger: CATTAGGTTGCTTTTCAGCAAAATGTCAGCTTTCCT...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTAGAAATGCATCTCAGTaGTCACCTTTGAGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: LERGLYTIATSLCYFTHLRNASQ*SPLSCS
Trigger: GGAGCAGCTCAAAGGTGACAACTGAGATGCATTTCT...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CCA 72 bp TTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTaGGTGTTTACTACACTGGTGAACTTAAATACTTTC +
Preference number: 3 (lower is better)
Translates to: FSDLGLLTAALG*VFTTLVNLNTF
Trigger: GAAAGTATTTAAGTTCACCAGTGTAGTAAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR-3UTR CAA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGACCAGGTTTTGTGATTTaGTTTGGGGTGAGAGTGGGT +
Preference number: 3 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGPGFVI*FGVRVG
Trigger: ACCCACTCTCACCCCAAACAAAATCACAAAACCTGG...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
3UTR TCA 72 bp TGTGGCTTCTGCACCTGTTATACTTTTGGATACGAGTaGGCTCCACTTAGCTTCGTTAAGATTAGAAATTTC +
Preference number: 3 (lower is better)
Translates to: CGFCTCYTFGYE*APLSFVKIRNF
Trigger: GAAATTTCTAATCTTAACGAAGCTAAGTGGAGCTCACTCGTATCCAAAAGTATAACAGGTGCAGAAGCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCCTGAGCGTGCTGGCCTaGCCTGGGGGCATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSLSVLA*PGGMGS
Trigger: GCTCCCCATGCCCCCAGGCCAGGCCAGCACGCTCAG...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCGCTCGGGTGACTTCCTaGGCCGCAGCCGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSARVTS*AAAAFQ
Trigger: CTGGAAGGCGGCTGCGGCTCAGGAAGTCACCCGAGC...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304032.13
CDS-3UTR CCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCGGGGCTGGGTTGGGATaGGGGAGGTCCCTCGTGCCA +
Preference number: 4 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSGAGLG*GRSLVP
Trigger: TGGCACGAGGGACCTCCCCCATCCCAACCCAGCCCC...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCCCGGCGCGTGCCGCGTaGCTACCTCCTCGGCTAATA +
Preference number: 4 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSPARAA*LPPRLI
Trigger: TATTAGCCGAGGAGGTAGTCACGCGGCACGCGCCGG...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGCCACTCGCTATCACCTaGGCGTGCTGGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQPLAIT*ACWPGL
Trigger: CAGGCCAGGCCAGCACGCTCAGGTGATAGCGAGTGG...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGGAAGGGAAGAGCCAGTaGAGGAGACCTGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQEGKSQ*RRPAPG
Trigger: CCCGGGGGCAGGTCTCCTGCACTGGCTCTTCCCTTC...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCGAACACCCCGGAGGCTaGCGGTGCGTGTGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSEHPGG*RCVWLH
Trigger: ATGAAGCCACACGCACCGGCAGCCTCCGGGGTGTTC...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAACCTGAGCAGTGCGTaGGACCCACTCCCCAGACCA +
Preference number: 4 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSNLSSA*DPLPRP
Trigger: TGGTCTGGGGAGTGGGTCTCACGCACTGCTCAGGTT...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGCCCCTGACATCCTCATaGCCAGCTGCTGACCGAGTG +
Preference number: 4 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQPLTSS*PAADRV
Trigger: CACTCGGTCAGCAGCTGGGCATGAGGATGTCAGGGG...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGGCTCTCTCCTGTGTCTaGGAACCCTGCGATTGGCGA +
Preference number: 4 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQALSCV*EPCDWR
Trigger: TCGCCAATCGCAGGGTTCTCAGACACAGGAGAGAGC...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGGCCAATGCGGACATGTaGCGCGAAGAAAGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQANADM*REESRR
Trigger: TCTGCGGCTTTCTTCGCGTCACATGTCCGCATTGGC...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGCTCAGTTGTCACCTTTaGGCTGCTCCGGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQLSCHL*AAPAAL
Trigger: AAGGGCAGCCGGAGCAGCTCAAAGGTGACAACTGAG...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGAAAAGGAGCCACTTCTaGAGTCTCCCGGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQKRSHF*SLPAAS
Trigger: AGAGGCGGCCGGGAGACTGCAGAAGTGGCTCCTTTT...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCTGCAGAGGAATCCTCTaGAAGGATGGCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSCRGIL*KDGRAS
Trigger: GCTGGCCCTGCCATCCTTCCAGAGGATTCCTCTGCA...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGGCTGCTCTGGGCTCCTaGCCGTGGCGTGGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: PRAGFLVCALASVPSVFLAALGS*PWRGSA
Trigger: CGCGGACCCACGCCACGGCCAGGAGCCCAGAGCAGC...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304032.13
CDS-3UTR CCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAAGCACAAAACACGCTaGGAACCCGAGGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSKHKTR*EPEDGE
Trigger: CTCCCCATCCTCGGGTTCCCAGCGTGTTTTGTGCTT...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCCATTACTTGTCTGGCTaGTGTGCACGGCAGACACCT +
Preference number: 4 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSHYLSG*CARQTP
Trigger: AGGTGTCTGCCGTGCACATCAGCCAGACAAGTAATG...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGTTAACTCCCACCGGCCAGGGGGAGGACTaGCGGGCACGGGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AACKLSADLEFTSMLTPTGQGED*RARAPA
Trigger: TGCTGGAGCCCGTGCCCGTCAGTCCTCCCCCTGGCC...GGTGGGAGTTAACATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR CCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCTGCTTACCGCTGCTCTaGGGTGGGTGTTTACTACAC +
Preference number: 4 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSCLPLL*GGCLLH
Trigger: GTGTAGTAAACACCCACCCCAGAGCAGCGGTAAGCA...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCCCCTTGGGGCTGGGTTaGGATGGGGGAGGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCPLGLG*DGGGPS
Trigger: CGAGGGACCTCCCCCATCCCAACCCAGCCCCAAGGG...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 72 bp ATATCCTGTTTGGGGCACATGGAGCGGCTGCCCAGCTaGGGCGTCCCAAGGTCGGATGCCACAGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: ISCLGHMERLPS*GVPRSDATAAC
Trigger: GCAGGCAGCTGTGGCATCCGACCTTGGGACGCCCAAGCTGGGCAGCCGCTCCATGTGCCCCAAACAGGATAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGCTTCCAGTGTCTGCATaGGGCCCATTAGGATTCCAT +
Preference number: 4 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQLPVSA*GPLGFH
Trigger: ATGGAATCCTAATGGGCCTCATGCAGACACTGGAAG...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCCCGTGGGAGGGAAACTaGTGCTTTTCAAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSPWEGN*CFSSLQ
Trigger: TTGCAGACTTGAAAAGCATCAGTTTCCCTCCCACGG...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGACCCCTGTGGCAAGATaGGAACCAAATTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQTPVAR*EPNSKL
Trigger: CAGCTTGGAATTTGGTTCTCATCTTGCCACAGGGGT...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGACAAACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGGAGTCGCAGGCGCCTTaGAAGCCGCGGAGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: GQTAAACKLSADLEFTSMESQAP*KPRSPL
Trigger: GAGCGGGCTCCGCGGCTTGCAAGGCGCCTGCGACTC...CATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTTTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR GCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGAAAACCACCCCATCTTaGCAGAGTCCCTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQKTTPS*QSPLVL
Trigger: AAGGACCAAGGGACTCTGGCAAGATGGGGTGGTTTT...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCCCTACAGGTACCCTGTaGCAGGCCAAAATGAAAACC +
Preference number: 4 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSPTGTL*QAKMKT
Trigger: GGTTTTCATTTTGGCCTGGCACAGGGTACCTGTAGG...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGGCTGCTTCCAGTGTCTaGATGAGGCCCATTAGGATT +
Preference number: 4 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQAASSV*MRPIRI
Trigger: AATCCTAATGGGCCTCATGCAGACACTGGAAGCAGC...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGTTAACTCCCACCCTCCTGGCCGTGGCGTaGGTCCGCGCGCTGCGTACT +
Preference number: 4 (lower is better)
Translates to: AACKLSADLEFTSMLTPTLLAVA*VRALRT
Trigger: AGTACGCAGCGCGCGGACCCACGCCACGGCCAGGAG...GGTGGGAGTTAACATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR CCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACCCAGGACTGGGGTGCTaGGCGGGGGAAACCATCTGC +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDPGLGC*AGETIC
Trigger: GCAGATGGTTTCCCCCGCCCAGCACCCCAGTCCTGG...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGGCAGGGAGGGAGAGTTaGTGTCCTGGGCGCCACGGG +
Preference number: 4 (lower is better)
Translates to: PRAGFLVCALASVPSVFLAGRES*CPGRHG
Trigger: CCCGTGGCGCCCAGGACACCAACTCTCCCTCCCTGC...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCCTGAGCGTGCTGGCCTaGCCTGGGGGCATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTLSVLA*PGGMGS
Trigger: GCTCCCCATGCCCCCAGGCCAGGCCAGCACGCTCAG...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GGACAAACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGGCTCGGGTGACTTCCTaGGCCGCAGCCGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GQTAAACKLSADLEFTSMARVTS*AAAAFQ
Trigger: CTGGAAGGCGGCTGCGGCTCAGGAAGTCACCCGAGC...CATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTTTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR TCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCACCTTGTGCAGGCGGTaGGGGACGGAAGCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCTLCRR*GTEAEH
Trigger: GTGCTCTGCTTCCGTCCCTCACCGCCTGCACAAGGT...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCTCCAGCCCTAGGCGCTaGTCCGCGGAGCAGCCATTA +
Preference number: 4 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCSSPRR*SAEQPL
Trigger: TAATGGCTGCTCCGCGGAGCAGCGCCTAGGGCTGGA...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304032.13
CDS-3UTR GCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGGGACCAGGACTGGGGTaGTGGGCGGGGGAAACCATC +
Preference number: 4 (lower is better)
Translates to: PRAGFLVCALASVPSVFLGPGLG*WAGETI
Trigger: GATGGTTTCCCCCGCCCAGCACCCCAGTCCTGGTCC...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGGGTTTGAAACCTCACTaGACCCTGCAAGTTTCACAG +
Preference number: 4 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQGLKPH*TLQVSQ
Trigger: CTGTGAAACTTGCAGGGTGCAGTGAGGTTTCAAACC...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCCCAAGCAAGGCCCAGTaGACGCGTGAGTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCPSKAQ*TRESQR
Trigger: CCGCTGTGACTCACGCGTGCACTGGGCCTTGCTTGG...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGGAAGGGAAGAGCCAGTaGAGGAGACCTGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: PRAGFLVCALASVPSVFLEGKSQ*RRPAPG
Trigger: CCCGGGGGCAGGTCTCCTGCACTGGCTCTTCCCTTC...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGCTCCTGGCCGTGGCGTaGGTCCGCGCGCTGCGTACT +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLLLAVA*VRALRT
Trigger: AGTACGCAGCGCGCGGACCCACGCCACGGCCAGGAG...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304032.13
ENST00000336665.9
CDS-3UTR CCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGTGGATACCGCAACGATaGAAAATCAGGCGAGGTACT +
Preference number: 4 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQWIPQR*KIRRGT
Trigger: AGTACCTCGCCTGATTTTCCATCGTTGCGGTATCCA...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACTCTGAGGGGGAGTCATaGCAGCTTGTGCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDSEGES*QLVLGA
Trigger: GGCCCCCAGCACAAGCTGCCATGACTCCCCCTCAGA...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGCCAGGACTGGGGTGCTaGGCGGGGGAAACCATCTGC +
Preference number: 4 (lower is better)
Translates to: PRAGFLVCALASVPSVFLPGLGC*AGETIC
Trigger: GCAGATGGTTTCCCCCGCCCAGCACCCCAGTCCTGG...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGCCCTTGGGGCTGGGTTaGGATGGGGGAGGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAPLGLG*DGGGPS
Trigger: CGAGGGACCTCCCCCATCCCAACCCAGCCCCAAGGG...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGCCGGCGCGTGCCGCGTaGCTACCTCCTCGGCTAATA +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAPARAA*LPPRLI
Trigger: TATTAGCCGAGGAGGTAGTCACGCGGCACGCGCCGG...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCCCGGCGCGTGCCGCGTaGCTACCTCCTCGGCTAATA +
Preference number: 4 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTPARAA*LPPRLI
Trigger: TATTAGCCGAGGAGGTAGTCACGCGGCACGCGCCGG...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGACCTTGTGCAGGCGGTaGGGGACGGAAGCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: PRAGFLVCALASVPSVFLTLCRR*GTEAEH
Trigger: GTGCTCTGCTTCCGTCCCTCACCGCCTGCACAAGGT...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGCTCATGCCCAGCTGCTaGCCGAGTGGGCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: PRAGFLVCALASVPSVFLLMPSC*PSGLPV
Trigger: CACTGGAAGCCCACTCGGTCAGCAGCTGGGCATGAG...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACAACCTGAGCAGTGCGTaGGACCCACTCCCCAGACCA +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDNLSSA*DPLPRP
Trigger: TGGTCTGGGGAGTGGGTCTCACGCACTGCTCAGGTT...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCTCAGGTGCTCGGGGCTaGGAGGGGCTGCAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTSGARG*EGLQSG
Trigger: TCCAGACTGCAGCCCCTCTCAGCCCCGAGCACCTGA...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGCCCGTCAGGTACCGGTaGACCAGGGCAGACTTGCCG +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAPVRYR*TRADLP
Trigger: CGGCAAGTCTGCCCTGGTGCACCGGTACCTGACGGG...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGTTAACTCCCACCCCCGTCAGGTACCGGTaGACCAGGGCAGACTTGCCG +
Preference number: 4 (lower is better)
Translates to: AACKLSADLEFTSMLTPTPVRYR*TRADLP
Trigger: CGGCAAGTCTGCCCTGGTGCACCGGTACCTGACGGG...GGTGGGAGTTAACATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR GCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGGGACCAGGACTGGGGTaGTGGGCGGGGGAAACCATC +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAGPGLG*WAGETI
Trigger: GATGGTTTCCCCCGCCCAGCACCCCAGTCCTGGTCC...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACGCAGAGCACATGCCGTaGCGGGAGGTTTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDAEHMP*REVWGL
Trigger: CAAACCCCAAACCTCCCGGCACGGCATGTGCTCTGC...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGCGGAAGCAGAGCACATaGCGTGCCGGGAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: PRAGFLVCALASVPSVFLRKQST*RAGRFG
Trigger: CCCAAACCTCCCGGCACGGCATGTGCTCTGCTTCCG...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCTTCCTTTCTTTCACCTaGATCTCAAGGCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSFLSFT*ISRQRP
Trigger: TGGCCTTTGCCTTGAGATGCAGGTGAAAGAAAGGAA...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGACAAACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGCAGCGTCCACCCACATaGCAAACTGCGCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GQTAAACKLSADLEFTSMQRPPT*QTAPPG
Trigger: CCCCGGAGGCGCAGTTTGCCATGTGGGTGGACGCTG...CATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR CCA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCGCTCTCTCCTGTGTGTaGTTTAGGGGAGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSALSCV*FRGVYE
Trigger: TTCATAAACTCCCCTAAACCACACACAGGAGAGAGC...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGGCTCTCTCCTGTGTGTaGTTTAGGGGAGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQALSCV*FRGVYE
Trigger: TTCATAAACTCCCCTAAACCACACACAGGAGAGAGC...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACCACGGGCAGGTTTCCTaGTGTGTGCACTGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDHGQVS*CVHWLR
Trigger: CCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTG...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGCTCTGCTGGCCACTCTaGCCCCATCTGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNALCWPL*PHLPTS
Trigger: GGAGGTGGGCAGATGGGGCCAGAGTGGCCAGCAGAG...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGGGGGCTGGGTTGGGATaGGGGAGGTCCCTCGTGCCA +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLGAGLG*GRSLVP
Trigger: TGGCACGAGGGACCTCCCCCATCCCAACCCAGCCCC...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGGGTAGACAGTCTTTCTaGGGGGCGTCCCGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAGRQSF*GASRAA
Trigger: TGCCGCGCGGGACGCCCCCCAGAAAGACTGTCTACC...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR TCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGTTGGAGGCTGCAGGTTaGGCAGGCCACTCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: PRAGFLVCALASVPSVFLLEAAG*AGHSCG
Trigger: CCCACAAGAGTGGCCTGCTCAACCTGCAGCCTCCAA...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACGCCAATGCGGACATGTaGCGCGAAGAAAGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDANADM*REESRR
Trigger: TCTGCGGCTTTCTTCGCGTCACATGTCCGCATTGGC...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACAAGTCCAAAGGCCCCTaGCATCCTCATGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDKSKGP*HPHAQL
Trigger: CAGCTGGGCATGAGGATGTCAGGGGCCTTTGGACTT...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACTCAAAACAGCCATGCTaGGAGCCCTGCTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDSKQPC*EPCWDP
Trigger: AGGGTCCCAGCAGGGCTCTCAGCATGGCTGTTTTGA...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGTTAACTCCCACCCCCGGACAGCTGGGCTaGTTGTGGGCCTTCAGCACA +
Preference number: 4 (lower is better)
Translates to: AACKLSADLEFTSMLTPTPGQLG*LWAFST
Trigger: TGTGCTGAAGGCCCACAATCAGCCCAGCTGTCCGGG...GGTGGGAGTTAACATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR GCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGTCCAGCCCTAGGCGCTaGTCCGCGGAGCAGCCATTA +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNASSPRR*SAEQPL
Trigger: TAATGGCTGCTCCGCGGAGCAGCGCCTAGGGCTGGA...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304032.13
ENST00000336665.9
CDS-3UTR GCA 90 bp GCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGTTAACTCCCACCTCCAGCCCTAGGCGCTaGTCCGCGGAGCAGCCATTA +
Preference number: 4 (lower is better)
Translates to: AACKLSADLEFTSMLTPTSSPRR*SAEQPL
Trigger: TAATGGCTGCTCCGCGGAGCAGCGCCTAGGGCTGGA...GGTGGGAGTTAACATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR GCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGGCCCCGAAGGAGGCTTaGTCGGGTGACTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAAPKEA*SGDFLS
Trigger: GCTCAGGAAGTCACCCGAGCAAGCCTCCTTCGGGGC...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304032.13
ENST00000336665.9
CDS-3UTR GCA 90 bp GGACAAACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGGCCCCGAAGGAGGCTTaGTCGGGTGACTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GQTAAACKLSADLEFTSMAPKEA*SGDFLS
Trigger: GCTCAGGAAGTCACCCGAGCAAGCCTCCTTCGGGGC...CATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR GCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGCCCGTCAGGTACCGGTaGACCAGGGCAGACTTGCCG +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLPVRYR*TRADLP
Trigger: CGGCAAGTCTGCCCTGGTGCACCGGTACCTGACGGG...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGGCAATCACCGGCGCGTaGCGCGTGACTACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLAITGA*RVTTSS
Trigger: CGAGGAGGTAGTCACGCGGCACGCGCCGGTGATTGC...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTCCGCCCCCAGTCCTTaGCTCTCCCAGCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLSAPSP*LSQPWW
Trigger: CCACCAAGGCTGGGAGAGGCAAGGACTGGGGGCGGA...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGTGGCGAGTGACCCGCTaGCTTCTCCCTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PRAGFLVCALASVPSVFLWRVTR*LLPPFQ
Trigger: CTGGAAAGGAGGGAGAAGGCAGCGGGTCACTCGCCA...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACGCCCAGGAAGCTGGGTaGTTGCCTAGAGTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDAQEAG*LPRVAE
Trigger: CTCTGCAACTCTAGGCAAGCACCCAGCTTCCTGGGC...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGCGGAAGCAGAGCACATaGCGTGCCGGGAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNARKQST*RAGRFG
Trigger: CCCAAACCTCCCGGCACGGCATGTGCTCTGCTTCCG...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACCTCAGGTTGGGGGAGTaGTCCCTACAGGTACCCTGT +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDLRLGE*SLQVPC
Trigger: ACAGGGTACCTGTAGGGAGCACTCCCCCAACCTGAG...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGCCAAGCACGGCGACCTaGGGTGCTCTCCAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAPSTAT*GALQQA
Trigger: AGCTTGCTGGAGAGCACCCCAGGTCGCCGTGCTTGG...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGGCAGGGAGGGAGAGTTaGTGTCCTGGGCGCCACGGG +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPAGRES*CPGRHG
Trigger: CCCGTGGCGCCCAGGACACCAACTCTCCCTCCCTGC...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGCTGAGCGTGCTGGCCTaGCCTGGGGGCATGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLLSVLA*PGGMGS
Trigger: GCTCCCCATGCCCCCAGGCCAGGCCAGCACGCTCAG...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACCATGCAAGTCTCTGCTaGCCACTCTGGCCCCATCTG +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDHASLC*PLWPHL
Trigger: CAGATGGGGCCAGAGTGGCCAGCAGAGACTTGCATG...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCCCTGTTTGGGGCACATaGAGCGGCTGCCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTPVWGT*SGCPAW
Trigger: CCAAGCTGGGCAGCCGCTCCATGTGCCCCAAACAGG...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGGGAGTCTCTATCATATaGTTTCACCATCCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQGVSII*FHHPQV
Trigger: AACCTGAGGATGGTGAAACCATATGATAGAGACTCC...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGCCAGGGCTGTGGTATTaGGCAGGGGGCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLPGLWY*AGGWAA
Trigger: AGCAGCCCAGCCCCCTGCCCAATACCACAGCCCTGG...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAACCCTTGGGGCTGGGTTaGGATGGGGGAGGTCCCTCG +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQPLGLG*DGGGPS
Trigger: CGAGGGACCTCCCCCATCCCAACCCAGCCCCAAGGG...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 72 bp AGATCCCGCTCTCTCCTGTGTCTGAGAACCCTGCGATaGGCGAGTGACCCGCTGCCTTCTCCCTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RSRSLLCLRTLR*ASDPLPSPSFP
Trigger: TGGAAAGGAGGGAGAAGGCAGCGGGTCACTCGCCAATCGCAGGGTTCTCAGACACAGGAGAGAGCGGGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 72 bp AGCCAGCCTCTCCTCACATTCATGAGGATATCCTGTTaGGGGCACATGGAGCGGCTGCCCAGCTTGGGCGTC +
Preference number: 4 (lower is better)
Translates to: SQPLLTFMRISC*GHMERLPSLGV
Trigger: GACGCCCAAGCTGGGCAGCCGCTCCATGTGCCCCAAACAGGATATCCTCATGAATGTGAGGAGAGGCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCCTACAGAGTCTACGGTaGAGGCTGTGTGGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCLQSLR*RLCGAS
Trigger: ACTCGCTCCACACAGCCTTCACCGTAGACTCTGTAG...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGCCTGCGATTGGCGAGTaGCCCGCTGCCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPPAIGE*PAAFSL
Trigger: GAGGGAGAAGGCAGCGGGTCACTCGCCAATCGCAGG...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGAGGGCACTGGCAAGCTaGGAGAGGAGGGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPRALAS*ERRVLG
Trigger: GCCCAGGACCCTCCTCTCTCAGCTTGCCAGTGCCCT...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACGAGCAAGGACCTCATTaGTGCTGTTCCCCGCCATGT +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDEQGPH*CCSPPC
Trigger: ACATGGCGGGGAACAGCATCAATGAGGTCCTTGCTC...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGGGGTCGTCTTGGCCCTaGTCAGCACCAGCGAACAGC +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLGSSWP*SAPANS
Trigger: GCTGTTCGCTGGTGCTGATCAGGGCCAAGACGACCC...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGTTGGAGGCTGCAGGTTaGGCAGGCCACTCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNALEAAG*AGHSCG
Trigger: CCCACAAGAGTGGCCTGCTCAACCTGCAGCCTCCAA...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTCCCACCTCCAGGCCCTaGGGCCCATCTGTAGAGGGT +
Preference number: 4 (lower is better)
Translates to: TKTWALESGCGVEQMDITPTSRP*GPSVEG
Trigger: ACCCTCTACAGATGGGCCTCAGGGCCTGGAGGTGGG...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGAACCTGAGCAGTGCGTaGGACCCACTCCCCAGACCA +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNANLSSA*DPLPRP
Trigger: TGGTCTGGGGAGTGGGTCTCACGCACTGCTCAGGTT...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGTTAACTCCCACCGGGCTCCAGCAGGCCTaGGATAAGTGCTGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: AACKLSADLEFTSMLTPTGLQQA*DKCWLS
Trigger: TGACAGCCAGCACTTATCTCAGGCCTGCTGGAGCCC...GGTGGGAGTTAACATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR GCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCCTTGTCTGGCTGATGTaGACGGCAGACACCTGCGCG +
Preference number: 4 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTLVWLM*TADTCA
Trigger: CGCGCAGGTGTCTGCCGTGCACATCAGCCAGACAAG...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGACAAACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGCTTGTCTGGCTGATGTaGACGGCAGACACCTGCGCG +
Preference number: 4 (lower is better)
Translates to: GQTAAACKLSADLEFTSMLVWLM*TADTCA
Trigger: CGCGCAGGTGTCTGCCGTGCACATCAGCCAGACAAG...CATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTTTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR GCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGCTCGGCCGCTCCCAATaGTGTCCGCACGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLLGRSQ*CPHDSP
Trigger: TGGAGAGTCGTGCGGACAGCATTGGGAGCGGCCGAG...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGGAACACCCCGGAGGCTaGCGGTGCGTGTGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLEHPGG*RCVWLH
Trigger: ATGAAGCCACACGCACCGGCAGCCTCCGGGGTGTTC...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGGCGGGGGAAACCATCTaGCCGTCCCAGCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPAGETI*PSQHLR
Trigger: CCTCAGGTGCTGGGACGGGCAGATGGTTTCCCCCGC...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCAGAGAGGGACGGGCCTaGAGCCAAGCACGGCGACCT +
Preference number: 4 (lower is better)
Translates to: ASHLLGQECGFPLISRTSREGRA*SQARRP
Trigger: AGGTCGCCGTGCTTGGCTGCAGGCCCGTCCCTCTCT...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACGGCTTTCAGAGCCCATaGAAGTCTCTGCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDGFQSP*KSLLAT
Trigger: AGTGGCCAGCAGAGACTTGCATGGGCTCTGAAAGCC...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCGATGCCACAGCTGCCTaGTGGTCTCACCTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTDATAA*WSHLAA
Trigger: GGCTGCTAGGTGAGACCAGCAGGCAGCTGTGGCATC...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCGGGGGAGGTCCCTCGTaGCAACCTGAGCAGTGCGTG +
Preference number: 4 (lower is better)
Translates to: ASHLLGQECGFPLISRTSGGGPS*QPEQCV
Trigger: CACGCACTGCTCAGGTTGGCACGAGGGACCTCCCCC...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGTTCTCCGAGGCGGGCTaGGTGGCGGTCGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQFSEAG*VAVAGS
Trigger: GGAGCCCGCGACCGCCACGCAGCCCGCCTCGGAGAA...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTCAGCGTCCACCCACATaGCAAACTGCGCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: TKTWALESGCGVEQMDITQRPPT*QTAPPG
Trigger: CCCCGGAGGCGCAGTTTGCCATGTGGGTGGACGCTG...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTTGGGGTGAGAGTGGGTaGGCGGGAGGGAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: IRLGEISEEGASMQGPCAWGESG*AGGRWP
Trigger: TGGCCACCTCCCTCCCGCCCACCCACTCTCACCCCA...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCAATCCTCTGGAAGGATaGCAGGGCCAGCTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCNPLEG*QGQLSL
Trigger: TAGGCTCAGCTGGCCCTGCCATCCTTCCAGAGGATT...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGCACGGGCAGGTTTCCTaGTGTGTGCACTGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAHGQVS*CVHWLR
Trigger: CCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTG...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGAGCGGCTGCCCAGCTTaGGCGTCCCAAGGTCGGATG +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPSGCPA*ASQGRM
Trigger: CATCCGACCTTGGGACGCCCAAGCTGGGCAGCCGCT...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGTATTGGGCAGGGGGCTaGGCTGCTTCCAGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAYWAGG*AASSVC
Trigger: GCAGACACTGGAAGCAGCCCAGCCCCCTGCCCAATA...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGGGCTGCAAGGTGGGTTaGCCTTCCCTGCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPGCKVG*PSLPLP
Trigger: AGGCAGGGGCAGGGAAGGCCAACCCACCTTGCAGCC...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAGGCTGCAAGGTGGGTTaGCCTTCCCTGCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQGCKVG*PSLPLP
Trigger: AGGCAGGGGCAGGGAAGGCCAACCCACCTTGCAGCC...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGAAACTGGCTGCAAGGTaGGTTGGCCTTCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAKLAAR*VGLPCP
Trigger: GGGGCAGGGAAGGCCAACCCACCTTGCAGCCAGTTT...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGCATCGCGTCCGCGGGTaGCGACGCGGGCTCGCCACT +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQHRVRG*RRGLAT
Trigger: AGTGGCGAGCCCGCGTCGCCACCCGCGGACGCGATG...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CCA 90 bp GGACAAACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGATGGCCCCGGACAGCTaGGCTGATTGTGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: GQTAAACKLSADLEFTSMMAPDS*ADCGPS
Trigger: TGAAGGCCCACAATCAGCCCAGCTGTCCGGGGCCAT...CATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR TCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGGGAGGCTTGCTCGGGTaGCTTCCTGAGCCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLGGLLG*LPEPQP
Trigger: CGGCTGCGGCTCAGGAAGTCACCCGAGCAAGCCTCC...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304032.13
ENST00000336665.9
CDS-3UTR TCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACCATTACTTGTCTGGCTaGTGTGCACGGCAGACACCT +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDHYLSG*CARQTP
Trigger: AGGTGTCTGCCGTGCACATCAGCCAGACAAGTAATG...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACATTCCGGTGGATCCCTaGGCATTCGATGCACATGAG +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDIPVDP*AFDAHE
Trigger: CTCATGTGCATCGAATGCTCAGGGATCCACCGGAAT...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAAAGGCGGCGGACGTCTaGAGCGGCTGGATACCGCAA +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQKAADV*SGWIPQ
Trigger: TTGCGGTATCCAGCCGCTTCAGACGTCCGCCGCCTT...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGAAGGCGGCGGACGTCTaGAGCGGCTGGATACCGCAA +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPKAADV*SGWIPQ
Trigger: TTGCGGTATCCAGCCGCTTCAGACGTCCGCCGCCTT...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGCCCCTGGGCCAGGTGTaGGGCCAACACTTATCACAC +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLPLGQV*GQHLSH
Trigger: GTGTGATAAGTGTTGGCCTCACACCTGGCCCAGGGG...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGGGCCCAGTGCACGCGTaGGTCACAGCGGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLGPVHA*VTAAHG
Trigger: GCCATGAGCCGCTGTGACTCACGCGTGCACTGGGCC...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTCCACTCGCTATCACCTaGGCGTGCTGGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: IRLGEISEEGASMQGPCAPLAIT*ACWPGL
Trigger: CAGGCCAGGCCAGCACGCTCAGGTGATAGCGAGTGG...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGCCACTCGCTATCACCTaGGCGTGCTGGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQPLAIT*ACWPGL
Trigger: CAGGCCAGGCCAGCACGCTCAGGTGATAGCGAGTGG...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGTCAGGTGCTCGGGGCTaGGAGGGGCTGCAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLSGARG*EGLQSG
Trigger: TCCAGACTGCAGCCCCTCTCAGCCCCGAGCACCTGA...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGCTCAGTTGTCACCTTTaGGCTGCTCCGGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNALSCHL*AAPAAL
Trigger: AAGGGCAGCCGGAGCAGCTCAAAGGTGACAACTGAG...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGCCAGCTGCTCCTTCCTaGCCATGGTCACGGAGATGC +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLPAAPS*PWSRRC
Trigger: GCATCTCCGTGACCATGGTCAGGAAGGAGCAGCTGG...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR GCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGGCCCCGAAGGAGGCTTaGTCGGGTGACTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPAPKEA*SGDFLS
Trigger: GCTCAGGAAGTCACCCGAGCAAGCCTCCTTCGGGGC...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304032.13
CDS-3UTR GCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGGCACCAGGGCAGACTTaGCGCTGGCCAAGTTACCCA +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLAPGQT*RWPSYP
Trigger: TGGGTAACTTGGCCAGCGGCAAGTCTGCCCTGGTGC...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGCTTGTCTGGCTGATGTaGACGGCAGACACCTGCGCG +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLLVWLM*TADTCA
Trigger: CGCGCAGGTGTCTGCCGTGCACATCAGCCAGACAAG...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp AACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGTTAACCTCGGCCGCTCCCAATaGTGTCCGCACGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: NSSGLQAIGRSGVHLYVNLGRSQ*CPHDSP
Trigger: TGGAGAGTCGTGCGGACAGCATTGGGAGCGGCCGAG...GTTAACATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR GCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTACTTCTGAGCGAGAATaGGGCGAGGCTGCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: TKTWALESGCGVEQMDITTSERE*GEAAAS
Trigger: GGACGCGGCAGCCTCGCCGCATTCTCGCTCAGAAGT...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGGCAATCACCGGCGCGTaGCGCGTGACTACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLAITGA*RVTTSS
Trigger: CGAGGAGGTAGTCACGCGGCACGCGCCGGTGATTGC...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCAAGTGGGAACGAGAGTaGGGTCCGCAAAGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCKWERE*GPQRKD
Trigger: GTCCTTTCTTTGCGGACCGCACTCTCGTTCCCACTT...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGCCTGCGGGGTGTTTCTaGTGCAGCCAGGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPPAGCF*CSQVCT
Trigger: GGTGCAGACCTGGCTGCAGCAGAAACACCCCGCAGG...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACCAGGAACTTGTCACTTaGTCACCCTCGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDQELVT*SPSSCS
Trigger: TGAGCAGCTCGAGGGTGAGCAAGTGACAAGTTCCTG...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAACGAGGCCGGAACCATaGAGGCCTCATCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQTRPEP*RPHQAG
Trigger: CCCAGCCTGATGAGGCCTGCATGGTTCCGGCCTCGT...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGACAGCCTCCCCAGAATaGAGGCTGGAGGACAGTGTC +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNATASPE*RLEDSV
Trigger: GACACTGTCCTCCAGCCTGCATTCTGGGGAGGCTGT...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCGGGGGTTGGCAAACGTaGCCATCACAGCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ASHLLGQECGFPLISRTSGGWQT*PSQPPQ
Trigger: CTGGGGAGGCTGTGATGGGCACGTTTGCCAACCCCC...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTCCAAGCAAGGCCCAGTaGACGCGTGAGTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: TKTWALESGCGVEQMDITPSKAQ*TRESQR
Trigger: CCGCTGTGACTCACGCGTGCACTGGGCCTTGCTTGG...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGCACGGCGACCTGGGGTaGTCTCCAGCAAGCTCCGAT +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPHGDLG*SPASSD
Trigger: ATCGGAGCTTGCTGGAGAGCACCCCAGGTCGCCGTG...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACAGGTTTGCTTACCGCTaGTCTGGGGTGGGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDRFAYR*SGVGVY
Trigger: GTAAACACCCACCCCAGAGCAGCGGTAAGCAAACCT...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGGCCCATGCAAGTCTCTaGTGGCCACTCTGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLAHASL*WPLWPH
Trigger: ATGGGGCCAGAGTGGCCAGCAGAGACTTGCATGGGC...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGAACCCAGGCAGGAAATaGATTTGCCCAGGGACCTCC +
Preference number: 4 (lower is better)
Translates to: PRAGFLVCALASVPSVFLNPGRK*ICPGTS
Trigger: GGAGGTCCCTGGGCAAATGCATTTCCTGCCTGGGTT...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGCTTTGCCACCCACCATaGAACTGCCCCACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLLCHPP*NCPTPL
Trigger: GAGAGGGGTGGGGCAGTTGCATGGTGGGTGGCAAAG...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGTCCTCCCGCTCCGGCTaGACAGCTCGGCGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQSSRSG*TARRFR
Trigger: GCGGAACCGCCGAGCTGTGCAGCCGGAGCGGGAGGA...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR GCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGCCCAGTGTCCGGCCTTaGGGCGCCTCAGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRPSVRP*GASGPL
Trigger: GAGCGGGCCTGAGGCGCCGCAAGGCCGGACACTGGG...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR GCA 90 bp GGACAAACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGCAAACAGCAGCGGCCTaGAAGCTATCGGCCGATCTG +
Preference number: 4 (lower is better)
Translates to: GQTAAACKLSADLEFTSMQTAAA*KLSADL
Trigger: CAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTTTG...CATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTTTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR CCA 90 bp GCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGTTAACTCCCACCTCCGGAGACTCCTCCTaGACATATGTGCCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: AACKLSADLEFTSMLTPTSGDSS*TYVPVR
Trigger: CCTGACGGGCACATATGTCCAGGAGGAGTCTCCGGA...GGTGGGAGTTAACATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR CCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCTCCGGAGACTCCTCCTaGACATATGTGCCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTSGDSS*TYVPVR
Trigger: CCTGACGGGCACATATGTCCAGGAGGAGTCTCCGGA...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGCAGCGTCCACCCACATaGCAAACTGCGCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQQRPPT*QTAPPG
Trigger: CCCCGGAGGCGCAGTTTGCCATGTGGGTGGACGCTG...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATCTGAGGGGGAGTCATaGCAGCTTGTGCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQSEGES*QLVLGA
Trigger: GGCCCCCAGCACAAGCTGCCATGACTCCCCCTCAGA...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTGGAGAGTTGGTGTCCTaGGCGCCACGGGGACCTAGA +
Preference number: 4 (lower is better)
Translates to: TKTWALESGCGVEQMDITGELVS*APRGPR
Trigger: TCTAGGTCCCCGTGGCGCCCAGGACACCAACTCTCC...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCCATGCAAGTCTCTGCTaGCCACTCTGGCCCCATCTG +
Preference number: 4 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTHASLC*PLWPHL
Trigger: CAGATGGGGCCAGAGTGGCCAGCAGAGACTTGCATG...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGAGCGGCTGCCCAGCTTaGGCGTCCCAAGGTCGGATG +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQSGCPA*ASQGRM
Trigger: CATCCGACCTTGGGACGCCCAAGCTGGGCAGCCGCT...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCCCTGTTTGGGGCACATaGAGCGGCTGCCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: ASHLLGQECGFPLISRTSPVWGT*SGCPAW
Trigger: CCAAGCTGGGCAGCCGCTCCATGTGCCCCAAACAGG...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCGCTGTTCCCAACAGCTaGTGTGTTAAGGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCAVPNS*CVKGVC
Trigger: GCAAACCCCCTTAACACACCAGCTGTTGGGAACAGC...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTGGCTGCAAGGTGGGTTaGCCTTCCCTGCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: IRLGEISEEGASMQGPCAGCKVG*PSLPLP
Trigger: AGGCAGGGGCAGGGAAGGCCAACCCACCTTGCAGCC...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGACAAACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGACCGCTAATTCATCATaGCCCCGGACAGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GQTAAACKLSADLEFTSMTANSS*PRTAGL
Trigger: CAGCCCAGCTGTCCGGGGCCATGATGAATTAGCGGT...CATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409457.5
3UTR CAA 72 bp AGGGACGGAAGCAGAGCACATGCCGTGCCGGGAGGTTaGGGGTTTGCTTTCCAAACACCTTTGCCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: RDGSRAHAVPGG*GFAFQTPLPPE
Trigger: CTCAGGAGGCAAAGGTGTTTGGAAAGCAAACCCCAAACCTCCCGGCACGGCATGTGCTCTGCTTCCGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGGGAGGCTTGCTCGGGTaGCTTCCTGAGCCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQGGLLG*LPEPQP
Trigger: CGGCTGCGGCTCAGGAAGTCACCCGAGCAAGCCTCC...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304032.13
ENST00000336665.9
CDS-3UTR TCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGGAGCAAGGACCTCATTaGTGCTGTTCCCCGCCATGT +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAEQGPH*CCSPPC
Trigger: ACATGGCGGGGAACAGCATCAATGAGGTCCTTGCTC...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTGGGTCGTCTTGGCCCTaGTCAGCACCAGCGAACAGC +
Preference number: 4 (lower is better)
Translates to: IRLGEISEEGASMQGPCAGSSWP*SAPANS
Trigger: GCTGTTCGCTGGTGCTGATCAGGGCCAAGACGACCC...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGGGCCCAGTGCACGCGTaGGTCACAGCGGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQGPVHA*VTAAHG
Trigger: GCCATGAGCCGCTGTGACTCACGCGTGCACTGGGCC...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGCCCATCTGTAGAGGGTaGGGACCTCAGACAAGAACA +
Preference number: 4 (lower is better)
Translates to: PRAGFLVCALASVPSVFLPICRG*GPQTRT
Trigger: TGTTCTTGTCTGAGGTCCTCACCCTCTACAGATGGG...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCCCACCTCCAGGCCCTaGGGCCCATCTGTAGAGGGT +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLPTSRP*GPSVEG
Trigger: ACCCTCTACAGATGGGCCTCAGGGCCTGGAGGTGGG...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTCAAAACAGCCATGCTaGGAGCCCTGCTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLSKQPC*EPCWDP
Trigger: AGGGTCCCAGCAGGGCTCTCAGCATGGCTGTTTTGA...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTGAGTCGCAGGCGCCTTaGAAGCCGCGGAGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFESQAP*KPRSPL
Trigger: GAGCGGGCTCCGCGGCTTGCAAGGCGCCTGCGACTC...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304032.13
CDS-3UTR GCA 90 bp AACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGTTAACGCACCAGGGCAGACTTaGCGCTGGCCAAGTTACCCA +
Preference number: 4 (lower is better)
Translates to: NSSGLQAIGRSGVHLYVNAPGQT*RWPSYP
Trigger: TGGGTAACTTGGCCAGCGGCAAGTCTGCCCTGGTGC...GTTAACATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR GCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCGCACCAGGGCAGACTTaGCGCTGGCCAAGTTACCCA +
Preference number: 4 (lower is better)
Translates to: ASHLLGQECGFPLISRTSAPGQT*RWPSYP
Trigger: TGGGTAACTTGGCCAGCGGCAAGTCTGCCCTGGTGC...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp AACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGTTAACTGCACGGCAGACACCTaGGCGGAACAGACGGAGGAA +
Preference number: 4 (lower is better)
Translates to: NSSGLQAIGRSGVHLYVNCTADT*AEQTEE
Trigger: TTCCTCCGTCTGTTCCGCGCAGGTGTCTGCCGTGCA...GTTAACATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR GCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCTGCACGGCAGACACCTaGGCGGAACAGACGGAGGAA +
Preference number: 4 (lower is better)
Translates to: ASHLLGQECGFPLISRTSCTADT*AEQTEE
Trigger: TTCCTCCGTCTGTTCCGCGCAGGTGTCTGCCGTGCA...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGCTCGGCCGCTCCCAATaGTGTCCGCACGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQLGRSQ*CPHDSP
Trigger: TGGAGAGTCGTGCGGACAGCATTGGGAGCGGCCGAG...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGGCCCTAGAAAGTGGCTaGGGAGTGGAGCAGATGGAC +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLALESG*GVEQMD
Trigger: GTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGC...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGTCCGCCCCCAGTCCTTaGCTCTCCCAGCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLSAPSP*LSQPWW
Trigger: CCACCAAGGCTGGGAGAGGCAAGGACTGGGGGCGGA...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGGCGGGGTGTTTCTGCTaGAGCCAGGTCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPAGCFC*SQVCTT
Trigger: TGTGGTGCAGACCTGGCTGCAGCAGAAACACCCCGC...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGCCGAGAACTGGCCTGTaGACTAGAGGCTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLPRTGL*TRGSAG
Trigger: TCCTGCAGAGCCTCTAGTGCACAGGCCAGTTCTCGG...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCGTGCTGAAAAGCCACTaGCGAGAACTGGCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTVLKSH*RELACA
Trigger: TGCACAGGCCAGTTCTCGGCAGTGGCTTTTCAGCAC...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGACGAGGCCGGAACCATaGAGGCCTCATCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQTRPEP*RPHQAG
Trigger: CCCAGCCTGATGAGGCCTGCATGGTTCCGGCCTCGT...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGAGGTTTCCTGGTGTGTaGACTGGCTTCGGTCCCATC +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNARFPGV*TGFGPI
Trigger: GATGGGACCGAAGCCAGTGCACACACCAGGAAACCT...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGGCAGAGCACATGCCGTaGCGGGAGGTTTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPAEHMP*REVWGL
Trigger: CAAACCCCAAACCTCCCGGCACGGCATGTGCTCTGC...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGATCCAGTTCACTCTCTaGCTGTGTCGGAAGGACCAG +
Preference number: 4 (lower is better)
Translates to: PRAGFLVCALASVPSVFLIQFTL*LCRKDQ
Trigger: CTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGAT...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTGCCCATGCAAGTCTCTaGTGGCCACTCTGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: TKTWALESGCGVEQMDITAHASL*WPLWPH
Trigger: ATGGGGCCAGAGTGGCCAGCAGAGACTTGCATGGGC...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTGATGCCACAGCTGCCTaGTGGTCTCACCTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: TKTWALESGCGVEQMDITDATAA*WSHLAA
Trigger: GGCTGCTAGGTGAGACCAGCAGGCAGCTGTGGCATC...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTTGCCAACCTGAGCAGTaGGTGAGACCCACTCCCCAG +
Preference number: 4 (lower is better)
Translates to: TKTWALESGCGVEQMDITCQPEQ*VRPTPQ
Trigger: CTGGGGAGTGGGTCTCACGCACTGCTCAGGTTGGCA...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCCAACCTGAGCAGTaGGTGAGACCCACTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQCQPEQ*VRPTPQ
Trigger: CTGGGGAGTGGGTCTCACGCACTGCTCAGGTTGGCA...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTCTTTGCCACCCACCATaGAACTGCCCCACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: TKTWALESGCGVEQMDITLCHPP*NCPTPL
Trigger: GAGAGGGGTGGGGCAGTTGCATGGTGGGTGGCAAAG...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGCTTTGCCACCCACCATaGAACTGCCCCACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPLCHPP*NCPTPL
Trigger: GAGAGGGGTGGGGCAGTTGCATGGTGGGTGGCAAAG...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGGGCCTTCCCTGCCCCTaGCTAGAAATGCATCTCAGT +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAGLPCP*LEMHLS
Trigger: ACTGAGATGCATTTCTAGGCAGGGGCAGGGAAGGCC...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCAAACAGAAAACTGGCTaGAAGGTGGGTTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCKQKTG*KVGWPS
Trigger: GGAAGGCCAACCCACCTTGCAGCCAGTTTTCTGTTT...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGACGCGGGCTCGCCACTaGCGTCCAACAAGTACATGT +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLTRARH*RPTSTC
Trigger: ACATGTACTTGTTGGACGGCAGTGGCGAGCCCGCGT...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR GCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGTGCGGGTGCGGAAGGTaGGGAAATCCCAAGCGCGCG +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLCGCGR*GNPKRA
Trigger: CGCGCGCTTGGGATTTCCGCACCTTCCGCACCCGCA...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR GCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCCCAGCTGCCCGGTGCTaGGGGTGCGGAAGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSPAARC*GCGRCG
Trigger: TCCGCACCTTCCGCACCCGCAGCACCGGGCAGCTGG...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR GCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGGCGCGCTCCAGCCGCTaGAGGTCGCTGTTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQARSSR*RSLLSS
Trigger: GCTGGACAACAGCGACCTGCAGCGGCTGGAGCGCGC...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CCA 90 bp GCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGTTAACTCCCACCGGGCAGACTTGCCGCTaGCCAAGTTACCCACAATTC +
Preference number: 4 (lower is better)
Translates to: AACKLSADLEFTSMLTPTGQTCR*PSYPQF
Trigger: GAATTGTGGGTAACTTGGCCAGCGGCAAGTCTGCCC...GGTGGGAGTTAACATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR CCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCGGGCAGACTTGCCGCTaGCCAAGTTACCCACAATTC +
Preference number: 4 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTGQTCR*PSYPQF
Trigger: GAATTGTGGGTAACTTGGCCAGCGGCAAGTCTGCCC...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCAGCGTCCACCCACATaGCAAACTGCGCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLQRPPT*QTAPPG
Trigger: CCCCGGAGGCGCAGTTTGCCATGTGGGTGGACGCTG...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCGAACAGACGGAGGAATaGCTGGGAGAATTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCEQTEE*LGELGS
Trigger: GCTACCTAATTCTCCCAGCCATTCCTCCGTCTGTTC...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGTCTGAGGGGGAGTCATaGCAGCTTGTGCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQSEGES*QLVLGA
Trigger: GGCCCCCAGCACAAGCTGCCATGACTCCCCCTCAGA...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACGCGGAGTGGAGCAGATaGACATCACTGAGAATGGTA +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDAEWSR*TSLRMV
Trigger: TACCATTCTCAGTGATGTCCATCTGCTCCACTCCGC...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGAGTCACAGCGGCTCATaGCAACGGCAAGGGGGCATC +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPSHSGS*QRQGGI
Trigger: GATGCCCCCTTGCCGTTGCCATGAGCCGCTGTGACT...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCAGTCACAGCGGCTCATaGCAACGGCAAGGGGGCATC +
Preference number: 4 (lower is better)
Translates to: ASHLLGQECGFPLISRTSSHSGS*QRQGGI
Trigger: GATGCCCCCTTGCCGTTGCCATGAGCCGCTGTGACT...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCACCGCTGCTCTGGGGTaGGTGTTTACTACACTGGTG +
Preference number: 4 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTTAALG*VFTTLV
Trigger: CACCAGTGTAGTAAACACCCACCCCAGAGCAGCGGT...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGAAACTGGCTGCAAGGTaGGTTGGCCTTCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPKLAAR*VGLPCP
Trigger: GGGGCAGGGAAGGCCAACCCACCTTGCAGCCAGTTT...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 72 bp GAAAAAGAGCCCAGGAAGCTGGGTGCTTGCCTAGAGTaGCAGAGGAATCCTCTGGAAGGATGGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: EKEPRKLGACLE*QRNPLEGWQGQ
Trigger: CTGGCCCTGCCATCCTTCCAGAGGATTCCTCTGCAACTCTAGGCAAGCACCCAGCTTCCTGGGCTCTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 72 bp CTGCCCCTGCCTAGAAATGCATCTCAGTTGTCACCTTaGAGCTGCTCCGGCTGCCCTTTAGGAAACGCACCC +
Preference number: 4 (lower is better)
Translates to: LPLPRNASQLSP*SCSGCPLGNAP
Trigger: GGGTGCGTTTCCTAAAGGGCAGCCGGAGCAGCTCAAAGGTGACAACTGAGATGCATTTCTAGGCAGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 72 bp TGGCCTTCCCTGCCCCTGCCTAGAAATGCATCTCAGTaGTCACCTTTGAGCTGCTCCGGCTGCCCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: WPSLPLPRNASQ*SPLSCSGCPLG
Trigger: TCCTAAAGGGCAGCCGGAGCAGCTCAAAGGTGACAACTGAGATGCATTTCTAGGCAGGGGCAGGGAAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGTTAACTCCCACCCATTACTTGTCTGGCTaGTGTGCACGGCAGACACCT +
Preference number: 4 (lower is better)
Translates to: AACKLSADLEFTSMLTPTHYLSG*CARQTP
Trigger: AGGTGTCTGCCGTGCACATCAGCCAGACAAGTAATG...GGTGGGAGTTAACATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR TCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTCCGGCGCGTGCCGCGTaGCTACCTCCTCGGCTAATA +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGPARAA*LPPRLI
Trigger: TATTAGCCGAGGAGGTAGTCACGCGGCACGCGCCGG...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGCCGGCGCGTGCCGCGTaGCTACCTCCTCGGCTAATA +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQPARAA*LPPRLI
Trigger: TATTAGCCGAGGAGGTAGTCACGCGGCACGCGCCGG...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGCTACAGAGTCTACGGTaGAGGCTGTGTGGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLLQSLR*RLCGAS
Trigger: ACTCGCTCCACACAGCCTTCACCGTAGACTCTGTAG...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTCCTGCGATTGGCGAGTaGCCCGCTGCCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGPAIGE*PAAFSL
Trigger: GAGGGAGAAGGCAGCGGGTCACTCGCCAATCGCAGG...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTGCTCTCTCCTGTGTCTaGGAACCCTGCGATTGGCGA +
Preference number: 4 (lower is better)
Translates to: TKTWALESGCGVEQMDITALSCV*EPCDWR
Trigger: TCGCCAATCGCAGGGTTCTCAGACACAGGAGAGAGC...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAGCAAGGCCCTTGTGCTaGAAAGCCACTGCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQARPLC*KATAEN
Trigger: GTTCTCGGCAGTGGCTTTTCAGCACAAGGGCCTTGC...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTAGGGCACTGGCAAGCTaGGAGAGGAGGGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGRALAS*ERRVLG
Trigger: GCCCAGGACCCTCCTCTCTCAGCTTGCCAGTGCCCT...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGTTGGAGGCTGCAGGTTaGGCAGGCCACTCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLLEAAG*AGHSCG
Trigger: CCCACAAGAGTGGCCTGCTCAACCTGCAGCCTCCAA...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGCTCCTGAGTAGTTGCTaGGGCCTGATCATACCGCAT +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNALLSSC*GLIIPH
Trigger: ATGCGGTATGATCAGGCCTCAGCAACTACTCAGGAG...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCTCATGCCCAGCTGCTaGCCGAGTGGGCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLLMPSC*PSGLPV
Trigger: CACTGGAAGCCCACTCGGTCAGCAGCTGGGCATGAG...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTTCAGGTGCTCGGGGCTaGGAGGGGCTGCAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGSGARG*EGLQSG
Trigger: TCCAGACTGCAGCCCCTCTCAGCCCCGAGCACCTGA...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGTGCACGGCAGACACCTaGGCGGAACAGACGGAGGAA +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQCTADT*AEQTEE
Trigger: TTCCTCCGTCTGTTCCGCGCAGGTGTCTGCCGTGCA...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCTCGGCCGCTCCCAATaGTGTCCGCACGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLLGRSQ*CPHDSP
Trigger: TGGAGAGTCGTGCGGACAGCATTGGGAGCGGCCGAG...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGTGGGCACCCTCCCACTaGTGTTGTTCCGGTTATTGT +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAWAPSH*CCSGYC
Trigger: ACAATAACCGGAACAACAGCAGTGGGAGGGTGCCCA...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGCCTCCTCGGCTAATATaGTTTCTTCTCGGCGATGAC +
Preference number: 4 (lower is better)
Translates to: PRAGFLVCALASVPSVFLPPRLI*FLLGDD
Trigger: GTCATCGCCGAGAAGAAAGCATATTAGCCGAGGAGG...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGACAGAGTACTGTCCCTaGGGGGTGTTTCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLTEYCP*GVFLLQ
Trigger: CTGCAGCAGAAACACCCCGCAGGGACAGTACTCTGT...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGGCGGGGGAAACCATCTaGCCGTCCCAGCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQAGETI*PSQHLR
Trigger: CCTCAGGTGCTGGGACGGGCAGATGGTTTCCCCCGC...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCGGTTTGAAACCTCACTaGACCCTGCAAGTTTCACAG +
Preference number: 4 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCGLKPH*TLQVSQ
Trigger: CTGTGAAACTTGCAGGGTGCAGTGAGGTTTCAAACC...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGAGGTTTCCTGGTGTGTaGACTGGCTTCGGTCCCATC +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLRFPGV*TGFGPI
Trigger: GATGGGACCGAAGCCAGTGCACACACCAGGAAACCT...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACGGCGACCTGGGGTaGTCTCCAGCAAGCTCCGAT +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLHGDLG*SPASSD
Trigger: ATCGGAGCTTGCTGGAGAGCACCCCAGGTCGCCGTG...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTAGAGAGGGACGGGCCTaGAGCCAAGCACGGCGACCT +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGREGRA*SQARRP
Trigger: AGGTCGCCGTGCTTGGCTGCAGGCCCGTCCCTCTCT...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGTGTGTTAAGGGGGTTTaGTCCACTGGGAAGATTCCC +
Preference number: 4 (lower is better)
Translates to: PRAGFLVCALASVPSVFLCVKGV*STGKIP
Trigger: GGGAATCTTCCCAGTGGAGCAAACCCCCTTAACACA...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGCCCCTGACATCCTCATaGCCAGCTGCTGACCGAGTG +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQPLTSS*PAADRV
Trigger: CACTCGGTCAGCAGCTGGGCATGAGGATGTCAGGGG...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGGGCAGGAAATGCATTTaGCCAGGGACCTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAGRKCI*PGTSRN
Trigger: ATTCCTGGAGGTCCCTGGGCAAATGCATTTCCTGCC...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGTGCCAACCTGAGCAGTaGGTGAGACCCACTCCCCAG +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQCQPEQ*VRPTPQ
Trigger: CTGGGGAGTGGGTCTCACGCACTGCTCAGGTTGGCA...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATTGAGCTGCTCCGGCTaGCCTTTAGGAAACGCACCC +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQLSCSG*PLGNAP
Trigger: GGGTGCGTTTCCTAAAGGGCAGCCGGAGCAGCTCAA...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGCCCGGTGCTGCGGGTaGGGAAGGTGCGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSARCCG*GRCGNP
Trigger: GGGATTTCCGCACCTTCCGCACCCGCAGCACCGGGC...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR GCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCGTTCCAGCTGCCCGGTaGTGCGGGTGCGGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSVPAAR*CGCGRC
Trigger: GCACCTTCCGCACCCGCAGCACCGGGCAGCTGGAAC...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR GCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCGCGGGGAGCCGTCGATaGTCTCGGCGCTGGACGAGT +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSAGSRR*SRRWTS
Trigger: ACTCGTCCAGCGCCGAGAGCATCGACGGCTCCCCGC...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTGCTGCTCTGGGCTCCTaGCCGTGGCGTGGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTAALGS*PWRGSA
Trigger: CGCGGACCCACGCCACGGCCAGGAGCCCAGAGCAGC...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304032.13
ENST00000336665.9
CDS-3UTR CCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCTGGGGTGAGAGTGGGTaGGCGGGAGGGAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPWGESG*AGGRWP
Trigger: TGGCCACCTCCCTCCCGCCCACCCACTCTCACCCCA...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTGGGCCTCCCTCAGCTaGCTGTTTCTCATCAAGGGA +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLWASLS*LFLIKG
Trigger: TCCCTTGATGAGAAACAGCCAGCTGAGGGAGGCCCA...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGTGCAGAGGAATCCTCTaGAAGGATGGCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPCRGIL*KDGRAS
Trigger: GCTGGCCCTGCCATCCTTCCAGAGGATTCCTCTGCA...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGTCTCCCAGCATCCCCTaGGCCAGGTGTGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLSPSIP*ARCEAN
Trigger: GTTGGCCTCACACCTGGCCCAGGGGATGCTGGGAGA...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTCCTGGTGTGTGCACTaGCTTCGGTCCCATCAGTGT +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLSWCVH*LRSHQC
Trigger: ACACTGATGGGACCGAAGCCAGTGCACACACCAGGA...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCTGTTCCCCGCCATGTaGAGGGCAGGGCACTGGCAA +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLLFPAM*RAGHWQ
Trigger: TTGCCAGTGCCCTGCCCTCCACATGGCGGGGAACAG...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCCAAGCACGGCGACCTaGGGTGCTCTCCAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLPSTAT*GALQQA
Trigger: AGCTTGCTGGAGAGCACCCCAGGTCGCCGTGCTTGG...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCGCAGGGAGGGAGAGTTaGTGTCCTGGGCGCCACGGG +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIAGRES*CPGRHG
Trigger: CCCGTGGCGCCCAGGACACCAACTCTCCCTCCCTGC...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCCAAGCCGCGGAAAGGTaGAGAATGCACGCATTGATG +
Preference number: 4 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTQAAER*RMHALM
Trigger: CATCAATGCGTGCATTCTCCACCTTTCCGCGGCTTG...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTCCAGGGCTGTGGTATTaGGCAGGGGGCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGPGLWY*AGGWAA
Trigger: AGCAGCCCAGCCCCCTGCCCAATACCACAGCCCTGG...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTGGGGCTGGGTTGGGATaGGGGAGGTCCCTCGTGCCA +
Preference number: 4 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFGAGLG*GRSLVP
Trigger: TGGCACGAGGGACCTCCCCCATCCCAACCCAGCCCC...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACAACCAAATTCCAAGCTaGCAGAAGGGAAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDNQIPS*QKGRAS
Trigger: ACTGGCTCTTCCCTTCTGCCAGCTTGGAATTTGGTT...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACGGAAACGCACCCCTGTaGCAAGATGAGAACCAAATT +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDGNAPL*QDENQI
Trigger: AATTTGGTTCTCATCTTGCCACAGGGGTGCGTTTCC...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTAAACTGGCTGCAAGGTaGGTTGGCCTTCCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: IRLGEISEEGASMQGPCAKLAAR*VGLPCP
Trigger: GGGGCAGGGAAGGCCAACCCACCTTGCAGCCAGTTT...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATGCTGAAGTAGCCGCGTaGCCGCGAGGCTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: TVVKVLRLVASAPVILLDAEVAA*PRGSAP
Trigger: CGGAGCGGAGCCTCGCGGCCACGCGGCTACTTCAGC...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGCGATGCTCTCGGCGCTaGACGAGTGCGCTTCGGCCG +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRRCSRR*TSALRP
Trigger: CGGCCGAAGCGCACTCGTCCAGCGCCGAGAGCATCG...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409538.5
3UTR CAA 72 bp GAAGCAGAGCACATGCCGTGCCGGGAGGTTTGGGGTTaGCTTTCCAAACACCTTTGCCTCCTGAGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: EAEHMPCREVWG*LSKHLCLLSSC
Trigger: GCAACTACTCAGGAGGCAAAGGTGTTTGGAAAGCAAACCCCAAACCTCCCGGCACGGCATGTGCTCTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGCATTACTTGTCTGGCTaGTGTGCACGGCAGACACCT +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLHYLSG*CARQTP
Trigger: AGGTGTCTGCCGTGCACATCAGCCAGACAAGTAATG...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGCAGTCTCCGCGAAGCTaGACGCGGGGGTGCAGATGT +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQQSPRS*TRGCRC
Trigger: ACATCTGCACCCCCGCGTTCAGCTTCGCGGAGACTG...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTGCTCTCTCCTGTGTCTaGGAACCCTGCGATTGGCGA +
Preference number: 4 (lower is better)
Translates to: IRLGEISEEGASMQGPCAALSCV*EPCDWR
Trigger: TCGCCAATCGCAGGGTTCTCAGACACAGGAGAGAGC...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTGCAAGGCCCTTGTGCTaGAAAGCCACTGCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: IRLGEISEEGASMQGPCAARPLC*KATAEN
Trigger: GTTCTCGGCAGTGGCTTTTCAGCACAAGGGCCTTGC...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGAGGGCACTGGCAAGCTaGGAGAGGAGGGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRRALAS*ERRVLG
Trigger: GCCCAGGACCCTCCTCTCTCAGCTTGCCAGTGCCCT...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATGGCCCAGTGCACGCGTaGGTCACAGCGGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: TVVKVLRLVASAPVILLDGPVHA*VTAAHG
Trigger: GCCATGAGCCGCTGTGACTCACGCGTGCACTGGGCC...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCGTAGTTGCTGAGGCCTaGTCATACCGCATCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ASHLLGQECGFPLISRTSVVAEA*SYRISG
Trigger: CCCTGAGATGCGGTATGATCAGGCCTCAGCAACTAC...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGGCCAATGCGGACATGTaGCGCGAAGAAAGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLANADM*REESRR
Trigger: TCTGCGGCTTTCTTCGCGTCACATGTCCGCATTGGC...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGCCCATCTGTAGAGGGTaGGGACCTCAGACAAGAACA +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLPICRG*GPQTRT
Trigger: TGTTCTTGTCTGAGGTCCTCACCCTCTACAGATGGG...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCCTCTCCTCACATTCATaGGGATATCCTGTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTLSSHS*GYPVWG
Trigger: GCCCCAAACAGGATATCCTCATGAATGTGAGGAGAG...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCGCGCGAAGATGCCGCTaGAGAAGCGCAGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSARRCR*RSAAAG
Trigger: ACCGGCTGCTGCGCTTCTTCAGCGGCATCTTCGCGC...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR GCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCCCCGTCAGGTACCGGTaGACCAGGGCAGACTTGCCG +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSPVRYR*TRADLP
Trigger: CGGCAAGTCTGCCCTGGTGCACCGGTACCTGACGGG...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCACCCGTCAGGTACCGGTaGACCAGGGCAGACTTGCCG +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSPVRYR*TRADLP
Trigger: CGGCAAGTCTGCCCTGGTGCACCGGTACCTGACGGG...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCCCCGTCAGGTACCGGTaGACCAGGGCAGACTTGCCG +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPPVRYR*TRADLP
Trigger: CGGCAAGTCTGCCCTGGTGCACCGGTACCTGACGGG...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGTGCACGGCAGACACCTaGGCGGAACAGACGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLCTADT*AEQTEE
Trigger: TTCCTCCGTCTGTTCCGCGCAGGTGTCTGCCGTGCA...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCTTGTCTGGCTGATGTaGACGGCAGACACCTGCGCG +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLLVWLM*TADTCA
Trigger: CGCGCAGGTGTCTGCCGTGCACATCAGCCAGACAAG...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTACTTCTGAGCGAGAATaGGGCGAGGCTGCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGTSERE*GEAAAS
Trigger: GGACGCGGCAGCCTCGCCGCATTCTCGCTCAGAAGT...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCCCTCCTCGGCTAATATaGTTTCTTCTCGGCGATGAC +
Preference number: 4 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTPPRLI*FLLGDD
Trigger: GTCATCGCCGAGAAGAAAGCATATTAGCCGAGGAGG...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCGCAATCACCGGCGCGTaGCGCGTGACTACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIAITGA*RVTTSS
Trigger: CGAGGAGGTAGTCACGCGGCACGCGCCGGTGATTGC...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGGCGGGGTGTTTCTGCTaGAGCCAGGTCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLAGCFC*SQVCTT
Trigger: TGTGGTGCAGACCTGGCTGCAGCAGAAACACCCCGC...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGGCGGGGGAAACCATCTaGCCGTCCCAGCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRAGETI*PSQHLR
Trigger: CCTCAGGTGCTGGGACGGGCAGATGGTTTCCCCCGC...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGGCCCAGGAAGCTGGGTaGTTGCCTAGAGTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQAQEAG*LPRVAE
Trigger: CTCTGCAACTCTAGGCAAGCACCCAGCTTCCTGGGC...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGACAGCCTCCCCAGAATaGAGGCTGGAGGACAGTGTC +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQTASPE*RLEDSV
Trigger: GACACTGTCCTCCAGCCTGCATTCTGGGGAGGCTGT...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGCTAAGGAGATACACCTaGGCCCCTTCTCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPLRRYT*APSLSC
Trigger: GCAGGAGAGAGAAGGGGCGCAGGTGTATCTCCTTAG...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGAGAATCACCTGCCAATaGGGACATGTGACGCGAAGA +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNARITCQ*GHVTRR
Trigger: TCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCT...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGGCCCATGCAAGTCTCTaGTGGCCACTCTGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLAHASL*WPLWPH
Trigger: ATGGGGCCAGAGTGGCCAGCAGAGACTTGCATGGGC...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTGGCACATGGAGCGGCTaGCCAGCTTGGGCGTCCCAA +
Preference number: 4 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFGTWSG*PAWASQ
Trigger: TTGGGACGCCCAAGCTGGGCAGCCGCTCCATGTGCC...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCGGCACATGGAGCGGCTaGCCAGCTTGGGCGTCCCAA +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIGTWSG*PAWASQ
Trigger: TTGGGACGCCCAAGCTGGGCAGCCGCTCCATGTGCC...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGTGTGTTAAGGGGGTTTaGTCCACTGGGAAGATTCCC +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNACVKGV*STGKIP
Trigger: GGGAATCTTCCCAGTGGAGCAAACCCCCTTAACACA...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAAACCCAGGCAGGAAATaGATTTGCCCAGGGACCTCC +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQNPGRK*ICPGTS
Trigger: GGAGGTCCCTGGGCAAATGCATTTCCTGCCTGGGTT...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGGGGGAGGTCCCTCGTaGCAACCTGAGCAGTGCGTG +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSGGGPS*QPEQCV
Trigger: CACGCACTGCTCAGGTTGGCACGAGGGACCTCCCCC...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGCCATGGTCACGGAGATaGGGTAGACAGTCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLPWSRR*GRQSFW
Trigger: CCAGAAAGACTGTCTACCGCATCTCCGTGACCATGG...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTCTCCTGGCCGTGGCGTaGGTCCGCGCGCTGCGTACT +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTLLAVA*VRALRT
Trigger: AGTACGCAGCGCGCGGACCCACGCCACGGCCAGGAG...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304032.13
ENST00000336665.9
CDS-3UTR CCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGTCCGGAGACTCCTCCTaGACATATGTGCCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLSGDSS*TYVPVR
Trigger: CCTGACGGGCACATATGTCCAGGAGGAGTCTCCGGA...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGTTAACTCCCACCGAACAGACGGAGGAATaGCTGGGAGAATTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: AACKLSADLEFTSMLTPTEQTEE*LGELGS
Trigger: GCTACCTAATTCTCCCAGCCATTCCTCCGTCTGTTC...GGTGGGAGTTAACATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR CCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGGAACAGACGGAGGAATaGCTGGGAGAATTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAEQTEE*LGELGS
Trigger: GCTACCTAATTCTCCCAGCCATTCCTCCGTCTGTTC...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCTTGGGCCCTAGAAAGTaGCTGCGGAGTGGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: ASHLLGQECGFPLISRTSLGPRK*LRSGAD
Trigger: ATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAA...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGGGCCTCCCTCAGCTaGCTGTTTCTCATCAAGGGA +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQWASLS*LFLIKG
Trigger: TCCCTTGATGAGAAACAGCCAGCTGAGGGAGGCCCA...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGTGTCCAGATCACCCATaGGGTTACACAGGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLCPDHP*GYTGRS
Trigger: CGAGCGGCCTGTGTAACCCCATGGGTGATCTGGACA...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCCCAGGACTGGGGTGCTaGGCGGGGGAAACCATCTGC +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIPGLGC*AGETIC
Trigger: GCAGATGGTTTCCCCCGCCCAGCACCCCAGTCCTGG...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGTCTCCCAGCATCCCCTaGGCCAGGTGTGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQSPSIP*ARCEAN
Trigger: GTTGGCCTCACACCTGGCCCAGGGGATGCTGGGAGA...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTCTGTTCCCCGCCATGTaGAGGGCAGGGCACTGGCAA +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGLFPAM*RAGHWQ
Trigger: TTGCCAGTGCCCTGCCCTCCACATGGCGGGGAACAG...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGAGTCACAGCGGCTCATaGCAACGGCAAGGGGGCATC +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLSHSGS*QRQGGI
Trigger: GATGCCCCCTTGCCGTTGCCATGAGCCGCTGTGACT...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCCTGGGAACCCGAGGATaGGGAGAGAGGGACGGGCCT +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPLGTRG*GERDGP
Trigger: AGGCCCGTCCCTCTCTCCCCATCCTCGGGTTCCCAG...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGGCGCCTACGGCACATTaGAGGCTGCAGGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLAPTAH*RLQVEQ
Trigger: CTGCTCAACCTGCAGCCTCCAATGTGCCGTAGGCGC...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAACCGCTGCTCTGGGGTaGGTGTTTACTACACTGGTG +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQTAALG*VFTTLV
Trigger: CACCAGTGTAGTAAACACCCACCCCAGAGCAGCGGT...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCCTCTGCTGGCCACTCTaGCCCCATCTGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPLCWPL*PHLPTS
Trigger: GGAGGTGGGCAGATGGGGCCAGAGTGGCCAGCAGAG...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGAGGATTCCATGCACCTaGACTGTCCTTCCTCAAGTC +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNARIPCT*TVLPQV
Trigger: GACTTGAGGAAGGACAGTCCAGGTGCATGGAATCCT...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCACCAGGGCTGTGGTATTaGGCAGGGGGCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSPGLWY*AGGWAA
Trigger: AGCAGCCCAGCCCCCTGCCCAATACCACAGCCCTGG...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGACAAACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGAGTTGCCGAACTTTCTaGAGGAGCGCTCCATTTCTC +
Preference number: 4 (lower is better)
Translates to: GQTAAACKLSADLEFTSMSCRTF*RSAPFL
Trigger: GAGAAATGGAGCGCTCCTCCAGAAAGTTCGGCAACT...CATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
3UTR CAA 72 bp AAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTaGGGGGAGTGCTCCCTACAGGTACCCTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: KESLSYGFTILR*GECSLQVPCAR
Trigger: CCTGGCACAGGGTACCTGTAGGGAGCACTCCCCCAACCTGAGGATGGTGAAACCATATGATAGAGACTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTGCTCGGGTGACTTCCTaGGCCGCAGCCGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTARVTS*AAAAFQ
Trigger: CTGGAAGGCGGCTGCGGCTCAGGAAGTCACCCGAGC...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304032.13
ENST00000336665.9
CDS-3UTR TCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAAAGGCGGCGGACGTCTaGAGCGGCTGGATACCGCAA +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSKAADV*SGWIPQ
Trigger: TTGCGGTATCCAGCCGCTTCAGACGTCCGCCGCCTT...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGACTTTTGGATACGAGTaGGCTCCACTTAGCTTCGTT +
Preference number: 4 (lower is better)
Translates to: PRAGFLVCALASVPSVFLTFGYE*APLSFV
Trigger: AACGAAGCTAAGTGGAGCTCACTCGTATCCAAAAGT...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGGCCCGTCCCAGCACCTaGGGTCAGAATCACAGAGTA +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLARPST*GQNHRV
Trigger: TACTCTGTGATTCTGACCTCAGGTGCTGGGACGGGC...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGGGGTCGTCTTGGCCCTaGTCAGCACCAGCGAACAGC +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRGSSWP*SAPANS
Trigger: GCTGTTCGCTGGTGCTGATCAGGGCCAAGACGACCC...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCCTCATGCCCAGCTGCTaGCCGAGTGGGCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSLMPSC*PSGLPV
Trigger: CACTGGAAGCCCACTCGGTCAGCAGCTGGGCATGAG...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCTCCCTCGTGCCAACCTaGGCAGTGCGTGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSSLVPT*AVRETH
Trigger: GTGGGTCTCACGCACTGCTCAGGTTGGCACGAGGGA...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCTCCCTCGTGCCAACCTaGGCAGTGCGTGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCISLVPT*AVRETH
Trigger: GTGGGTCTCACGCACTGCTCAGGTTGGCACGAGGGA...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTCCCTCGTGCCAACCTaGGCAGTGCGTGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRSLVPT*AVRETH
Trigger: GTGGGTCTCACGCACTGCTCAGGTTGGCACGAGGGA...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTCTCGGCCGCTCCCAATaGTGTCCGCACGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFLGRSQ*CPHDSP
Trigger: TGGAGAGTCGTGCGGACAGCATTGGGAGCGGCCGAG...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCACTTCTGAGCGAGAATaGGGCGAGGCTGCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCITSERE*GEAAAS
Trigger: GGACGCGGCAGCCTCGCCGCATTCTCGCTCAGAAGT...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGCCCGGAGGCTGCCGGTaGGTGTGGCTTCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQPGGCR*VWLHVS
Trigger: AGAAACATGAAGCCACACGCACCGGCAGCCTCCGGG...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCCCTGCGGGGTGTTTCTaGTGCAGCCAGGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPPAGCF*CSQVCT
Trigger: GGTGCAGACCTGGCTGCAGCAGAAACACCCCGCAGG...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATGGACCAGGACTGGGGTaGTGGGCGGGGGAAACCATC +
Preference number: 4 (lower is better)
Translates to: TVVKVLRLVASAPVILLDGPGLG*WAGETI
Trigger: GATGGTTTCCCCCGCCCAGCACCCCAGTCCTGGTCC...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGTGGCGAGTGACCCGCTaGCTTCTCCCTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQWRVTR*LLPPFQ
Trigger: CTGGAAAGGAGGGAGAAGGCAGCGGGTCACTCGCCA...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCCGAGAACTGGCCTGTaGACTAGAGGCTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLPRTGL*TRGSAG
Trigger: TCCTGCAGAGCCTCTAGTGCACAGGCCAGTTCTCGG...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCCGGAAGCAGAGCACATaGCGTGCCGGGAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIRKQST*RAGRFG
Trigger: CCCAAACCTCCCGGCACGGCATGTGCTCTGCTTCCG...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGGGCTTTCAGAGCCCATaGAAGTCTCTGCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQGFQSP*KSLLAT
Trigger: AGTGGCCAGCAGAGACTTGCATGGGCTCTGAAAGCC...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGGTCGGATGCCACAGCTaGCTGCTGGTCTCACCTAGC +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQVGCHS*LLVSPS
Trigger: GCTAGGTGAGACCAGCAGGCAGCTGTGGCATCCGAC...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGTCCCCAACACACTCATaGCTTGTTTGGTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: PRAGFLVCALASVPSVFLSPTHS*LVWFLS
Trigger: AGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGA...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGTCTAAATGCACACTTTaGCACCCACCATGCAACTGC +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNASKCTL*HPPCNC
Trigger: GCAGTTGCATGGTGGGTGGCAAAGTGTGCATTTAGA...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCTTGTCACCTTTGAGCTaGTCCGGCTGCCCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: ASHLLGQECGFPLISRTSLSPLS*SGCPLG
Trigger: TCCTAAAGGGCAGCCGGAGCAGCTCAAAGGTGACAA...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATTGTCACCTTTGAGCTaGTCCGGCTGCCCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQLSPLS*SGCPLG
Trigger: TCCTAAAGGGCAGCCGGAGCAGCTCAAAGGTGACAA...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCTTCCCTGCCCCTaGCTAGAAATGCATCTCAGT +
Preference number: 4 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLGLPCP*LEMHLS
Trigger: ACTGAGATGCATTTCTAGGCAGGGGCAGGGAAGGCC...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCATCACGAAGGCATCTCTaGGCGGGGAGCCGTCGATGC +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSSRRHL*AGSRRC
Trigger: GCATCGACGGCTCCCCGCGCAGAGATGCCTTCGTGA...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CCA 90 bp AACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGTTAACAGATGGAGTAGATGTTaGGGTGGACCGACTCGAAGC +
Preference number: 4 (lower is better)
Translates to: NSSGLQAIGRSGVHLYVNRWSRC*GGPTRS
Trigger: GCTTCGAGTCGGTCCACCCCAACATCTACTCCATCT...GTTAACATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR CCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGTCCGGAGACTCCTCCTaGACATATGTGCCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLSGDSS*TYVPVR
Trigger: CCTGACGGGCACATATGTCCAGGAGGAGTCTCCGGA...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTTGGGGTGAGAGTGGGTaGGCGGGAGGGAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTWGESG*AGGRWP
Trigger: TGGCCACCTCCCTCCCGCCCACCCACTCTCACCCCA...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGTGGATACCGCAACGATaGAAAATCAGGCGAGGTACT +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAWIPQR*KIRRGT
Trigger: AGTACCTCGCCTGATTTTCCATCGTTGCGGTATCCA...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACCACCTGTTATACTTTTaGATACGAGTGAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDHLLYF*IRVSST
Trigger: AGTGGAGCTCACTCGTATCCAAAAGTATAACAGGTG...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGGCGGAGTGGAGCAGATaGACATCACTGAGAATGGTA +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLAEWSR*TSLRMV
Trigger: TACCATTCTCAGTGATGTCCATCTGCTCCACTCCGC...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAAAAGTGGCTGCGGAGTaGAGCAGATGGACATCACTG +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQKVAAE*SRWTSL
Trigger: CAGTGATGTCCATCTGCTCCACTCCGCAGCCACTTT...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTAAAGTGGCTGCGGAGTaGAGCAGATGGACATCACTG +
Preference number: 4 (lower is better)
Translates to: TKTWALESGCGVEQMDITKVAAE*SRWTSL
Trigger: CAGTGATGTCCATCTGCTCCACTCCGCAGCCACTTT...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCTCTCCCAGCATCCCCTaGGCCAGGTGTGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSSPSIP*ARCEAN
Trigger: GTTGGCCTCACACCTGGCCCAGGGGATGCTGGGAGA...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCCCAAGCACGGCGACCTaGGGTGCTCTCCAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIPSTAT*GALQQA
Trigger: AGCTTGCTGGAGAGCACCCCAGGTCGCCGTGCTTGG...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATCTGGGAACCCGAGGATaGGGAGAGAGGGACGGGCCT +
Preference number: 4 (lower is better)
Translates to: TVVKVLRLVASAPVILLDLGTRG*GERDGP
Trigger: AGGCCCGTCCCTCTCTCCCCATCCTCGGGTTCCCAG...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCAGCAGGCCACTCTTGTaGGGTAAGATGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: ASHLLGQECGFPLISRTSSRPLL*GKMSPP
Trigger: TGGTGGACTCATCTTACCCCACAAGAGTGGCCTGCT...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTCAAGCCGCGGAAAGGTaGAGAATGCACGCATTGATG +
Preference number: 4 (lower is better)
Translates to: TKTWALESGCGVEQMDITQAAER*RMHALM
Trigger: CATCAATGCGTGCATTCTCCACCTTTCCGCGGCTTG...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCAGAGGGGCTGCAGTCTaGAGAATTAGATGTATTTCA +
Preference number: 4 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCRGAAV*RIRCIS
Trigger: TGAAATACATCTAATTCTCCAGACTGCAGCCCCTCT...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 72 bp CAGTCCTTGCCTCTCCCAGCCTTGGTGGTAATTAGCTaGAAAGTGGGAACGAGAGTGCGGTCCGCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: QSLPLPALVVIS*KVGTRVRSAKK
Trigger: TTTCTTTGCGGACCGCACTCTCGTTCCCACTTTCAAGCTAATTACCACCAAGGCTGGGAGAGGCAAGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGCATTACTTGTCTGGCTaGTGTGCACGGCAGACACCT +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQHYLSG*CARQTP
Trigger: AGGTGTCTGCCGTGCACATCAGCCAGACAAGTAATG...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGATTCCGGTGGATCCCTaGGCATTCGATGCACATGAG +
Preference number: 4 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLIPVDP*AFDAHE
Trigger: CTCATGTGCATCGAATGCTCAGGGATCCACCGGAAT...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATCAGTCTCCGCGAAGCTaGACGCGGGGGTGCAGATGT +
Preference number: 4 (lower is better)
Translates to: TVVKVLRLVASAPVILLDQSPRS*TRGCRC
Trigger: ACATCTGCACCCCCGCGTTCAGCTTCGCGGAGACTG...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGTGGTTTTGGGGCCAGTaGCTCAGGAACTTGTCACTT +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPWFWGQ*LRNLSL
Trigger: AAGTGACAAGTTCCTGAGTCACTGGCCCCAAAACCA...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTCCTGCGATTGGCGAGTaGCCCGCTGCCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTPAIGE*PAAFSL
Trigger: GAGGGAGAAGGCAGCGGGTCACTCGCCAATCGCAGG...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGCCCCTGGGCCAGGTGTaGGGCCAACACTTATCACAC +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRPLGQV*GQHLSH
Trigger: GTGTGATAAGTGTTGGCCTCACACCTGGCCCAGGGG...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGACCACAAGGGCTCCCTaGAGAAAGCCACTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPTTRAP*RKPLRN
Trigger: ATTTCTGAGTGGCTTTCTTCAGGGAGCCCTTGTGGT...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTCTCTCCTCACATTCATaGGGATATCCTGTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: TKTWALESGCGVEQMDITLSSHS*GYPVWG
Trigger: GCCCCAAACAGGATATCCTCATGAATGTGAGGAGAG...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTCCGTGGGAGGGAAACTaGTGCTTTTCAAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: TKTWALESGCGVEQMDITPWEGN*CFSSLQ
Trigger: TTGCAGACTTGAAAAGCATCAGTTTCCCTCCCACGG...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTGCGCGTCGTTCTTGCTaGGCACCTCGCCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTARRSC*APRPRP
Trigger: TGGACGTGGGCGAGGTGCTCAGCAAGAACGACGCGC...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR TCA 90 bp GCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGTTAACTCCCACCTTAAGGGGTCTTTTGTaGGTTGCCGAACTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: AACKLSADLEFTSMLTPTLRGLL*VAELSG
Trigger: TCCAGAAAGTTCGGCAACTCACAAAAGACCCCTTAA...GGTGGGAGTTAACATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR GCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCGCACCAGGGCAGACTTaGCGCTGGCCAAGTTACCCA +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPAPGQT*RWPSYP
Trigger: TGGGTAACTTGGCCAGCGGCAAGTCTGCCCTGGTGC...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGCACCAGGGCAGACTTaGCGCTGGCCAAGTTACCCA +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSAPGQT*RWPSYP
Trigger: TGGGTAACTTGGCCAGCGGCAAGTCTGCCCTGGTGC...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTGCACGGCAGACACCTaGGCGGAACAGACGGAGGAA +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRCTADT*AEQTEE
Trigger: TTCCTCCGTCTGTTCCGCGCAGGTGTCTGCCGTGCA...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTCTTGTCTGGCTGATGTaGACGGCAGACACCTGCGCG +
Preference number: 4 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFLVWLM*TADTCA
Trigger: CGCGCAGGTGTCTGCCGTGCACATCAGCCAGACAAG...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATCTCGGCCGCTCCCAATaGTGTCCGCACGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: TVVKVLRLVASAPVILLDLGRSQ*CPHDSP
Trigger: TGGAGAGTCGTGCGGACAGCATTGGGAGCGGCCGAG...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGAAAAGGAGCCACTTCTaGAGTCTCCCGGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQKRSHF*SLPAAS
Trigger: AGAGGCGGCCGGGAGACTGCAGAAGTGGCTCCTTTT...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTAAAAGGAGCCACTTCTaGAGTCTCCCGGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGKRSHF*SLPAAS
Trigger: AGAGGCGGCCGGGAGACTGCAGAAGTGGCTCCTTTT...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAAAAACCACCCCATCTTaGCAGAGTCCCTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQKTTPS*QSPLVL
Trigger: AAGGACCAAGGGACTCTGGCAAGATGGGGTGGTTTT...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGGGCTTCATGTTTCTGTaGTACATGAGTCTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAGFMFL*YMSLVS
Trigger: GGACACTAGACTCATGTAGCACAGAAACATGAAGCC...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCACCCGGAGGCTGCCGGTaGGTGTGGCTTCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSPGGCR*VWLHVS
Trigger: AGAAACATGAAGCCACACGCACCGGCAGCCTCCGGG...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCCCCGGAGGCTGCCGGTaGGTGTGGCTTCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSPGGCR*VWLHVS
Trigger: AGAAACATGAAGCCACACGCACCGGCAGCCTCCGGG...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGGAAATACAAACAGACTaGCAACGAGCTCTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAEIQTD*QRALGK
Trigger: TTTGCCCAGAGCTCGTTGGCAGTCTGTTTGTATTTC...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCTGGCGAGTGACCCGCTaGCTTCTCCCTCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPWRVTR*LLPPFQ
Trigger: CTGGAAAGGAGGGAGAAGGCAGCGGGTCACTCGCCA...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGAGGAAGCTGGGTGCTTaGCTAGAGTTGCAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPRKLGA*LELQRN
Trigger: ATTCCTCTGCAACTCTAGGCAAGCACCCAGCTTCCT...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAAGGAAGCTGGGTGCTTaGCTAGAGTTGCAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQRKLGA*LELQRN
Trigger: ATTCCTCTGCAACTCTAGGCAAGCACCCAGCTTCCT...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGAGGTTTCCTGGTGTGTaGACTGGCTTCGGTCCCATC +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLRFPGV*TGFGPI
Trigger: GATGGGACCGAAGCCAGTGCACACACCAGGAAACCT...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATCCAAGCAAGGCCCAGTaGACGCGTGAGTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: TVVKVLRLVASAPVILLDPSKAQ*TRESQR
Trigger: CCGCTGTGACTCACGCGTGCACTGGGCCTTGCTTGG...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGCCAGAACATCCTAAGTaGAGGGAGGGAGAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQPEHPK*REGELV
Trigger: CACCAACTCTCCCTCCCTGCACTTAGGATGTTCTGG...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTGGGAGGTTTGGGGTTTaGTTTCCAAACACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: TKTWALESGCGVEQMDITGRFGV*FPNTFA
Trigger: GGCAAAGGTGTTTGGAAAGCAAACCCCAAACCTCCC...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTGCCCCTTCTCTCTCCTaGATAATGGGAGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: IRLGEISEEGASMQGPCAAPSLS*IMGGKL
Trigger: CAGCTTTCCTCCCATTATGCAGGAGAGAGAAGGGGC...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCGATGCCACAGCTGCCTaGTGGTCTCACCTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSDATAA*WSHLAA
Trigger: GGCTGCTAGGTGAGACCAGCAGGCAGCTGTGGCATC...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCGTCGGATGCCACAGCTaGCTGCTGGTCTCACCTAGC +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPVGCHS*LLVSPS
Trigger: GCTAGGTGAGACCAGCAGGCAGCTGTGGCATCCGAC...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGTCGGATGCCACAGCTaGCTGCTGGTCTCACCTAGC +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSVGCHS*LLVSPS
Trigger: GCTAGGTGAGACCAGCAGGCAGCTGTGGCATCCGAC...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCCCCCTGACATCCTCATaGCCAGCTGCTGACCGAGTG +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSPLTSS*PAADRV
Trigger: CACTCGGTCAGCAGCTGGGCATGAGGATGTCAGGGG...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTGCTGCTTCCAGTGTCTaGATGAGGCCCATTAGGATT +
Preference number: 4 (lower is better)
Translates to: TKTWALESGCGVEQMDITAASSV*MRPIRI
Trigger: AATCCTAATGGGCCTCATGCAGACACTGGAAGCAGC...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAGCTGCTTCCAGTGTCTaGATGAGGCCCATTAGGATT +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQAASSV*MRPIRI
Trigger: AATCCTAATGGGCCTCATGCAGACACTGGAAGCAGC...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTGAAGGGAAGAGCCAGTaGAGGAGACCTGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTEGKSQ*RRPAPG
Trigger: CCCGGGGGCAGGTCTCCTGCACTGGCTCTTCCCTTC...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTTTGAGCTGCTCCGGCTaGCCTTTAGGAAACGCACCC +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGLSCSG*PLGNAP
Trigger: GGGTGCGTTTCCTAAAGGGCAGCCGGAGCAGCTCAA...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTTTGTCACCTTTGAGCTaGTCCGGCTGCCCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: IRLGEISEEGASMQGPCALSPLS*SGCPLG
Trigger: TCCTAAAGGGCAGCCGGAGCAGCTCAAAGGTGACAA...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGACGCCCCAGTTCCAGCTaGCCGGTGCTGCGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGRPSSS*PVLRVR
Trigger: CCGCACCCGCAGCACCGGGCAGCTGGAACTGGGGCG...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR GCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGACCAGGCTCCCGGAGCTaGTGTGGCGCCTTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGPGSRS*CGAFRR
Trigger: GCGGCGGAAGGCGCCACAGCAGCTCCGGGAGCCTGG...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTCAGCGTCCACCCACATaGCAAACTGCGCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTQRPPT*QTAPPG
Trigger: CCCCGGAGGCGCAGTTTGCCATGTGGGTGGACGCTG...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAGCGGAGTGGAGCAGATaGACATCACTGAGAATGGTA +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQAEWSR*TSLRMV
Trigger: TACCATTCTCAGTGATGTCCATCTGCTCCACTCCGC...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGCACGGGCAGGTTTCCTaGTGTGTGCACTGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRHGQVS*CVHWLR
Trigger: CCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTG...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTAGCAGGCCACTCTTGTaGGGTAAGATGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: IRLGEISEEGASMQGPCASRPLL*GKMSPP
Trigger: TGGTGGACTCATCTTACCCCACAAGAGTGGCCTGCT...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGAGCAGGCCACTCTTGTaGGGTAAGATGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLSRPLL*GKMSPP
Trigger: TGGTGGACTCATCTTACCCCACAAGAGTGGCCTGCT...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTGCGCCTACGGCACATTaGAGGCTGCAGGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFAPTAH*RLQVEQ
Trigger: CTGCTCAACCTGCAGCCTCCAATGTGCCGTAGGCGC...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATGGAGAGTTGGTGTCCTaGGCGCCACGGGGACCTAGA +
Preference number: 4 (lower is better)
Translates to: TVVKVLRLVASAPVILLDGELVS*APRGPR
Trigger: TCTAGGTCCCCGTGGCGCCCAGGACACCAACTCTCC...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGCAAGCCGCGGAAAGGTaGAGAATGCACGCATTGATG +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQQAAER*RMHALM
Trigger: CATCAATGCGTGCATTCTCCACCTTTCCGCGGCTTG...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTTCACAGACGGGACACTaGCCACTTCTCTCTAATCAC +
Preference number: 4 (lower is better)
Translates to: TKTWALESGCGVEQMDITSQTGH*PLLSNH
Trigger: GTGATTAGAGAGAAGTGGCCAGTGTCCCGTCTGTGA...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTTCACCATCCTCAGGTTaGGGGAGTGCTCCCTACAGG +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGSPSSG*GSAPYR
Trigger: CCTGTAGGGAGCACTCCCCCAACCTGAGGATGGTGA...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGGGGGGTTTGCTCCACTaGGAAGATTCCCCAACACAC +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLGGLLH*EDSPTH
Trigger: GTGTGTTGGGGAATCTTCCCAGTGGAGCAAACCCCC...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCAGGATTCCATGCACCTaGACTGTCCTTCCTCAAGTC +
Preference number: 4 (lower is better)
Translates to: ASHLLGQECGFPLISRTSRIPCT*TVLPQV
Trigger: GACTTGAGGAAGGACAGTCCAGGTGCATGGAATCCT...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCTATTGGGCAGGGGGCTaGGCTGCTTCCAGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPYWAGG*AASSVC
Trigger: GCAGACACTGGAAGCAGCCCAGCCCCCTGCCCAATA...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTTGGGACCCTTGGGGCTaGGTTGGGATGGGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTWDPWG*VGMGEV
Trigger: GACCTCCCCCATCCCAACCCAGCCCCAAGGGTCCCA...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTAAGGCGGCGGACGTCTaGAGCGGCTGGATACCGCAA +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTKAADV*SGWIPQ
Trigger: TTGCGGTATCCAGCCGCTTCAGACGTCCGCCGCCTT...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGGGGATCCTGCAGTGGTaGTCTGTCATCGTCACGTCA +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQGILQW*SVIVTS
Trigger: TGACGTGACGATGACAGATCACCACTGCAGGATCCC...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTGCCCGTCCCAGCACCTaGGGTCAGAATCACAGAGTA +
Preference number: 4 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFARPST*GQNHRV
Trigger: TACTCTGTGATTCTGACCTCAGGTGCTGGGACGGGC...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCGCCCGTCCCAGCACCTaGGGTCAGAATCACAGAGTA +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPARPST*GQNHRV
Trigger: TACTCTGTGATTCTGACCTCAGGTGCTGGGACGGGC...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATCTTGTGGGGTAAGATaGGTCCACCAAGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQSCGVR*VHQVQA
Trigger: TGCTTGAACTTGGTGGACTCATCTTACCCCACAAGA...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTACCACAAGGGCTCCCTaGAGAAAGCCACTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: IRLGEISEEGASMQGPCATTRAP*RKPLRN
Trigger: ATTTCTGAGTGGCTTTCTTCAGGGAGCCCTTGTGGT...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTAAGTCCAAAGGCCCCTaGCATCCTCATGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFKSKGP*HPHAQL
Trigger: CAGCTGGGCATGAGGATGTCAGGGGCCTTTGGACTT...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGCTTCCAGTGTCTGCATaGGGCCCATTAGGATTCCAT +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQLPVSA*GPLGFH
Trigger: ATGGAATCCTAATGGGCCTCATGCAGACACTGGAAG...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGCCGTGGGAGGGAAACTaGTGCTTTTCAAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQPWEGN*CFSSLQ
Trigger: TTGCAGACTTGAAAAGCATCAGTTTCCCTCCCACGG...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTCTCAGTTGTCACCTTTaGGCTGCTCCGGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFLSCHL*AAPAAL
Trigger: AAGGGCAGCCGGAGCAGCTCAAAGGTGACAACTGAG...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGTGGGCACCCTCCCACTaGTGTTGTTCCGGTTATTGT +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLWAPSH*CCSGYC
Trigger: ACAATAACCGGAACAACAGCAGTGGGAGGGTGCCCA...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCAAAAGGAGCCACTTCTaGAGTCTCCCGGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIKRSHF*SLPAAS
Trigger: AGAGGCGGCCGGGAGACTGCAGAAGTGGCTCCTTTT...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCGCCCTAGAAAGTGGCTaGGGAGTGGAGCAGATGGAC +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSALESG*GVEQMD
Trigger: GTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGC...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGTGCATATATACATTGTaGACACACTTGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNACIYTL*THLGDR
Trigger: CCTGTCTCCCAAGTGTGTGCACAATGTATATATGCA...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCCCGAGAACTGGCCTGTaGACTAGAGGCTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPPRTGL*TRGSAG
Trigger: TCCTGCAGAGCCTCTAGTGCACAGGCCAGTTCTCGG...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGAAGAGGGAGCTTCAATaGAAGGCCCTTGTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPKRELQ*KALVLK
Trigger: TTTCAGCACAAGGGCCTTGCATTGAAGCTCCCTCTT...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCACAGCCTCCCCAGAATaGAGGCTGGAGGACAGTGTC +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSTASPE*RLEDSV
Trigger: GACACTGTCCTCCAGCCTGCATTCTGGGGAGGCTGT...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGGAGGTTTGGGGTTTaGTTTCCAAACACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLGRFGV*FPNTFA
Trigger: GGCAAAGGTGTTTGGAAAGCAAACCCCAAACCTCCC...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCCTCAGGTTGGGGGAGTaGTCCCTACAGGTACCCTGT +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSLRLGE*SLQVPC
Trigger: ACAGGGTACCTGTAGGGAGCACTCCCCCAACCTGAG...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTTGTGTTAAGGGGGTTTaGTCCACTGGGAAGATTCCC +
Preference number: 4 (lower is better)
Translates to: IRLGEISEEGASMQGPCACVKGV*STGKIP
Trigger: GGGAATCTTCCCAGTGGAGCAAACCCCCTTAACACA...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTCCCATTAGGATTCCATaGACCTGGACTGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: IRLGEISEEGASMQGPCAPIRIP*TWTVLP
Trigger: AGGAAGGACAGTCCAGGTGCATGGAATCCTAATGGG...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGCCCATTAGGATTCCATaGACCTGGACTGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQPIRIP*TWTVLP
Trigger: AGGAAGGACAGTCCAGGTGCATGGAATCCTAATGGG...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGGGCAGGAAATGCATTTaGCCAGGGACCTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLGRKCI*PGTSRN
Trigger: ATTCCTGGAGGTCCCTGGGCAAATGCATTTCCTGCC...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAGAAGCAGCTTCTAAATaGACACTTTGCCACCCACCA +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQEAASK*TLCHPP
Trigger: TGGTGGGTGGCAAAGTGTGCATTTAGAAGCTGCTTC...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCATTGAGCTGCTCCGGCTaGCCTTTAGGAAACGCACCC +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSLSCSG*PLGNAP
Trigger: GGGTGCGTTTCCTAAAGGGCAGCCGGAGCAGCTCAA...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGGGCCTTCCCTGCCCCTaGCTAGAAATGCATCTCAGT +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQGLPCP*LEMHLS
Trigger: ACTGAGATGCATTTCTAGGCAGGGGCAGGGAAGGCC...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGTGGATACACCCACGCTaGCCTTCCATCTCTATACAC +
Preference number: 4 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLWIHPR*PSISIH
Trigger: GTGTATAGAGATGGAAGGGCAGCGTGGGTGTATCCA...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGCCAGCGTGCGGTTCTTaGTCTTACTGCGTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQPACGS*SYCVPN
Trigger: GTTGGGAACGCAGTAAGAGCAAGAACCGCACGCTGG...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCATCCGGAGACTCCTCCTaGACATATGTGCCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSSGDSS*TYVPVR
Trigger: CCTGACGGGCACATATGTCCAGGAGGAGTCTCCGGA...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGGAACAGACGGAGGAATaGCTGGGAGAATTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQEQTEE*LGELGS
Trigger: GCTACCTAATTCTCCCAGCCATTCCTCCGTCTGTTC...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCAGGGATGCTGTGGTTTaGTTGACTACATTTGACTAC +
Preference number: 4 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTRDAVV*LTTFDY
Trigger: GTAGTCAAATGTAGTCAACCAAACCACAGCATCCCT...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGAGGGATGCTGTGGTTTaGTTGACTACATTTGACTAC +
Preference number: 4 (lower is better)
Translates to: YGEGCVERVCLVDSNTNARDAVV*LTTFDY
Trigger: GTAGTCAAATGTAGTCAACCAAACCACAGCATCCCT...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAACAAATGGCAGGACGATaGAACTGTCGTCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQQMAGR*NCRQGS
Trigger: AGAACCTTGACGACAGTTCCATCGTCCTGCCATTTG...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGTTGGGCCCTAGAAAGTaGCTGCGGAGTGGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQLGPRK*LRSGAD
Trigger: ATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAA...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTTGGGCCTCCCTCAGCTaGCTGTTTCTCATCAAGGGA +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGWASLS*LFLIKG
Trigger: TCCCTTGATGAGAAACAGCCAGCTGAGGGAGGCCCA...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTGTCCAGATCACCCATaGGGTTACACAGGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRCPDHP*GYTGRS
Trigger: CGAGCGGCCTGTGTAACCCCATGGGTGATCTGGACA...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTAATCCTCTGGAAGGATaGCAGGGCCAGCTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGNPLEG*QGQLSL
Trigger: TAGGCTCAGCTGGCCCTGCCATCCTTCCAGAGGATT...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGAAGCACAAAACACGCTaGGAACCCGAGGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQKHKTR*EPEDGE
Trigger: CTCCCCATCCTCGGGTTCCCAGCGTGTTTTGTGCTT...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTCCGTGCCGGGAGGTTTaGGGTTTGCTTTCCAAACAC +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGPCREV*GLLSKH
Trigger: GTGTTTGGAAAGCAAACCCCAAACCTCCCGGCACGG...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCCATGCAAGTCTCTGCTaGCCACTCTGGCCCCATCTG +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSHASLC*PLWPHL
Trigger: CAGATGGGGCCAGAGTGGCCAGCAGAGACTTGCATG...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTTCACCATCCTCAGGTTaGGGGAGTGCTCCCTACAGG +
Preference number: 4 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFSPSSG*GSAPYR
Trigger: CCTGTAGGGAGCACTCCCCCAACCTGAGGATGGTGA...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTTGGGACCCTTGGGGCTaGGTTGGGATGGGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: LERGLYTIATSLCYFTHLWDPWG*VGMGEV
Trigger: GACCTCCCCCATCCCAACCCAGCCCCAAGGGTCCCA...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 72 bp ACCCTCAAAAACTGCCTTTCCTTCTGCTACCAAAACTaGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: TLKNCLSFCYQN*GPRKWLRSGAD
Trigger: ATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGTAGCAGAAGGAAAGGCAGTTTTTGAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 72 bp TGGGCCAGGTGTGAGGCCAACACTTATCACACTGGTTaGAAACCTCACTGCACCCTGCAAGTTTCACAGATG +
Preference number: 4 (lower is better)
Translates to: WARCEANTYHTG*KPHCTLQVSQM
Trigger: CATCTGTGAAACTTGCAGGGTGCAGTGAGGTTTCAAACCAGTGTGATAAGTGTTGGCCTCACACCTGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGACTTTTGGATACGAGTaGGCTCCACTTAGCTTCGTT +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPTFGYE*APLSFV
Trigger: AACGAAGCTAAGTGGAGCTCACTCGTATCCAAAAGT...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGCTACAGAGTCTACGGTaGAGGCTGTGTGGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRLQSLR*RLCGAS
Trigger: ACTCGCTCCACACAGCCTTCACCGTAGACTCTGTAG...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCGGGATCCTGCAGTGGTaGTCTGTCATCGTCACGTCA +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSGILQW*SVIVTS
Trigger: TGACGTGACGATGACAGATCACCACTGCAGGATCCC...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTCCCCTGGGCCAGGTGTaGGGCCAACACTTATCACAC +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTPLGQV*GQHLSH
Trigger: GTGTGATAAGTGTTGGCCTCACACCTGGCCCAGGGG...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCGAGCAAGGACCTCATTaGTGCTGTTCCCCGCCATGT +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSEQGPH*CCSPPC
Trigger: ACATGGCGGGGAACAGCATCAATGAGGTCCTTGCTC...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGTCGGAAGGACCAGTCTaGGGACTGTTTCTTAGTGAT +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQSEGPV*GLFLSD
Trigger: ATCACTAAGAAACAGTCCTCAGACTGGTCCTTCCGA...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATTCAAAACAGCCATGCTaGGAGCCCTGCTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: TVVKVLRLVASAPVILLDSKQPC*EPCWDP
Trigger: AGGGTCCCAGCAGGGCTCTCAGCATGGCTGTTTTGA...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTGCACCAGGGCAGACTTaGCGCTGGCCAAGTTACCCA +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTAPGQT*RWPSYP
Trigger: TGGGTAACTTGGCCAGCGGCAAGTCTGCCCTGGTGC...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAGAAATACAAACAGACTaGCAACGAGCTCTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQEIQTD*QRALGK
Trigger: TTTGCCCAGAGCTCGTTGGCAGTCTGTTTGTATTTC...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCACAGAGTACTGTCCCTaGGGGGTGTTTCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPTEYCP*GVFLLQ
Trigger: CTGCAGCAGAAACACCCCGCAGGGACAGTACTCTGT...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTACAGAGTACTGTCCCTaGGGGGTGTTTCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFTEYCP*GVFLLQ
Trigger: CTGCAGCAGAAACACCCCGCAGGGACAGTACTCTGT...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGGTGCTGAAAAGCCACTaGCGAGAACTGGCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRVLKSH*RELACA
Trigger: TGCACAGGCCAGTTCTCGGCAGTGGCTTTTCAGCAC...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGCTAAGGAGATACACCTaGGCCCCTTCTCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRLRRYT*APSLSC
Trigger: GCAGGAGAGAGAAGGGGCGCAGGTGTATCTCCTTAG...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGATCCAGTTCACTCTCTaGCTGTGTCGGAAGGACCAG +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQIQFTL*LCRKDQ
Trigger: CTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGAT...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGAGAATCACCTGCCAATaGGGACATGTGACGCGAAGA +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLRITCQ*GHVTRR
Trigger: TCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCT...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTAGGTTTGCTTACCGCTaGTCTGGGGTGGGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGRFAYR*SGVGVY
Trigger: GTAAACACCCACCCCAGAGCAGCGGTAAGCAAACCT...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGGGCAGGAAATGCATTTaGCCAGGGACCTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQGRKCI*PGTSRN
Trigger: ATTCCTGGAGGTCCCTGGGCAAATGCATTTCCTGCC...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTTCTAAATGCACACTTTaGCACCCACCATGCAACTGC +
Preference number: 4 (lower is better)
Translates to: IRLGEISEEGASMQGPCASKCTL*HPPCNC
Trigger: GCAGTTGCATGGTGGGTGGCAAAGTGTGCATTTAGA...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGACCCGGCGCGGCCAGCTaGTCCTTCCTGACCATGGTC +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGPGAAS*SFLTMV
Trigger: GACCATGGTCAGGAAGGAGCAGCTGGCCGCGCCGGG...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGGGCAGACTTGCCGCTaGCCAAGTTACCCACAATTC +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSGQTCR*PSYPQF
Trigger: GAATTGTGGGTAACTTGGCCAGCGGCAAGTCTGCCC...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCGGGCAGACTTGCCGCTaGCCAAGTTACCCACAATTC +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPGQTCR*PSYPQF
Trigger: GAATTGTGGGTAACTTGGCCAGCGGCAAGTCTGCCC...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGGAACAGACGGAGGAATaGCTGGGAGAATTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLEQTEE*LGELGS
Trigger: GCTACCTAATTCTCCCAGCCATTCCTCCGTCTGTTC...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCGCTCTCTCCTGTGTGTaGTTTAGGGGAGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: ASHLLGQECGFPLISRTSALSCV*FRGVYE
Trigger: TTCATAAACTCCCCTAAACCACACACAGGAGAGAGC...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGTGGATACCGCAACGATaGAAAATCAGGCGAGGTACT +
Preference number: 4 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLWIPQR*KIRRGT
Trigger: AGTACCTCGCCTGATTTTCCATCGTTGCGGTATCCA...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGAGGGATGCTGTGGTTTaGTTGACTACATTTGACTAC +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLRDAVV*LTTFDY
Trigger: GTAGTCAAATGTAGTCAACCAAACCACAGCATCCCT...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGCACCTGTTATACTTTTaGATACGAGTGAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLHLLYF*IRVSST
Trigger: AGTGGAGCTCACTCGTATCCAAAAGTATAACAGGTG...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGAGGTTCTCAGACTTGTaGCTTCTGCACCTGTTATAC +
Preference number: 4 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPRFSDL*LLHLLY
Trigger: GTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCT...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGAAAGTGGCTGCGGAGTaGAGCAGATGGACATCACTG +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQKVAAE*SRWTSL
Trigger: CAGTGATGTCCATCTGCTCCACTCCGCAGCCACTTT...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCTTGGGCCCTAGAAAGTaGCTGCGGAGTGGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSLGPRK*LRSGAD
Trigger: ATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAA...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCAATCCTCTGGAAGGATaGCAGGGCCAGCTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSNPLEG*QGQLSL
Trigger: TAGGCTCAGCTGGCCCTGCCATCCTTCCAGAGGATT...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCTCCTGGTGTGTGCACTaGCTTCGGTCCCATCAGTGT +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSSWCVH*LRSHQC
Trigger: ACACTGATGGGACCGAAGCCAGTGCACACACCAGGA...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCCCGTGCCGGGAGGTTTaGGGTTTGCTTTCCAAACAC +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPPCREV*GLLSKH
Trigger: GTGTTTGGAAAGCAAACCCCAAACCTCCCGGCACGG...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCGGGGGTTTGCTCCACTaGGAAGATTCCCCAACACAC +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIGGLLH*EDSPTH
Trigger: GTGTGTTGGGGAATCTTCCCAGTGGAGCAAACCCCC...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCAGACGTTAGCTTCCTaGGCCAGTGTAGACTGTTCA +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLQTLAS*ASVDCS
Trigger: TGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTG...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCCATTACTTGTCTGGCTaGTGTGCACGGCAGACACCT +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSHYLSG*CARQTP
Trigger: AGGTGTCTGCCGTGCACATCAGCCAGACAAGTAATG...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAATTCCGGTGGATCCCTaGGCATTCGATGCACATGAG +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSIPVDP*AFDAHE
Trigger: CTCATGTGCATCGAATGCTCAGGGATCCACCGGAAT...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCATTCCGGTGGATCCCTaGGCATTCGATGCACATGAG +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSIPVDP*AFDAHE
Trigger: CTCATGTGCATCGAATGCTCAGGGATCCACCGGAAT...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTGCAAGGCCCTTGTGCTaGAAAGCCACTGCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTARPLC*KATAEN
Trigger: GTTCTCGGCAGTGGCTTTTCAGCACAAGGGCCTTGC...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCCTCCTGAGTAGTTGCTaGGGCCTGATCATACCGCAT +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPLLSSC*GLIIPH
Trigger: ATGCGGTATGATCAGGCCTCAGCAACTACTCAGGAG...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGCTCCTGAGTAGTTGCTaGGGCCTGATCATACCGCAT +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRLLSSC*GLIIPH
Trigger: ATGCGGTATGATCAGGCCTCAGCAACTACTCAGGAG...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTACCACAAGGGCTCCCTaGAGAAAGCCACTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGTTRAP*RKPLRN
Trigger: ATTTCTGAGTGGCTTTCTTCAGGGAGCCCTTGTGGT...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCCCCATCTGTAGAGGGTaGGGACCTCAGACAAGAACA +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSPICRG*GPQTRT
Trigger: TGTTCTTGTCTGAGGTCCTCACCCTCTACAGATGGG...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTCTCTCCTCACATTCATaGGGATATCCTGTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGLSSHS*GYPVWG
Trigger: GCCCCAAACAGGATATCCTCATGAATGTGAGGAGAG...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACCCCTGTGGCAAGATaGGAACCAAATTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQTPVAR*EPNSKL
Trigger: CAGCTTGGAATTTGGTTCTCATCTTGCCACAGGGGT...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCATGGGCACCCTCCCACTaGTGTTGTTCCGGTTATTGT +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSWAPSH*CCSGYC
Trigger: ACAATAACCGGAACAACAGCAGTGGGAGGGTGCCCA...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCTGGGCACCCTCCCACTaGTGTTGTTCCGGTTATTGT +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSWAPSH*CCSGYC
Trigger: ACAATAACCGGAACAACAGCAGTGGGAGGGTGCCCA...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTAAAAGGAGCCACTTCTaGAGTCTCCCGGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTKRSHF*SLPAAS
Trigger: AGAGGCGGCCGGGAGACTGCAGAAGTGGCTCCTTTT...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTGCCCTAGAAAGTGGCTaGGGAGTGGAGCAGATGGAC +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTALESG*GVEQMD
Trigger: GTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGC...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAAAGACCCTCAAAAACTaGCTTTCCTTCTGCTACCAA +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQKTLKN*LSFCYQ
Trigger: TTGGTAGCAGAAGGAAAGGCAGTTTTTGAGGGTCTT...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCAAGTGGGAACGAGAGTaGGGTCCGCAAAGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIKWERE*GPQRKD
Trigger: GTCCTTTCTTTGCGGACCGCACTCTCGTTCCCACTT...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCAAGTGGGAACGAGAGTaGGGTCCGCAAAGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSKWERE*GPQRKD
Trigger: GTCCTTTCTTTGCGGACCGCACTCTCGTTCCCACTT...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCCAGGAACTTGTCACTTaGTCACCCTCGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIQELVT*SPSSCS
Trigger: TGAGCAGCTCGAGGGTGAGCAAGTGACAAGTTCCTG...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCACAGGAACTTGTCACTTaGTCACCCTCGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSQELVT*SPSSCS
Trigger: TGAGCAGCTCGAGGGTGAGCAAGTGACAAGTTCCTG...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCATATATACATTGTaGACACACTTGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQCIYTL*THLGDR
Trigger: CCTGTCTCCCAAGTGTGTGCACAATGTATATATGCA...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAAGAGAGGGACGGGCCTaGAGCCAAGCACGGCGACCT +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGREGRA*SQARRP
Trigger: AGGTCGCCGTGCTTGGCTGCAGGCCCGTCCCTCTCT...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTGGGAGGTTTGGGGTTTaGTTTCCAAACACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGGRFGV*FPNTFA
Trigger: GGCAAAGGTGTTTGGAAAGCAAACCCCAAACCTCCC...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTGCAGAGCACATGCCGTaGCGGGAGGTTTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LERGLYTIATSLCYFTHLAEHMP*REVWGL
Trigger: CAAACCCCAAACCTCCCGGCACGGCATGTGCTCTGC...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAATCCAGTTCACTCTCTaGCTGTGTCGGAAGGACCAG +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSIQFTL*LCRKDQ
Trigger: CTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGAT...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAAGGTTTGCTTACCGCTaGTCTGGGGTGGGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSRFAYR*SGVGVY
Trigger: GTAAACACCCACCCCAGAGCAGCGGTAAGCAAACCT...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTTGGATACACCCACGCTaGCCTTCCATCTCTATACAC +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGWIHPR*PSISIH
Trigger: GTGTATAGAGATGGAAGGGCAGCGTGGGTGTATCCA...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGACCACGTCCAGGGTGTTaGGCTTCTCCGAGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGPRPGC*ASPRRA
Trigger: AGCCCGCCTCGGAGAAGCGCAACACCCTGGACGTGG...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTTCCGGAGACTCCTCCTaGACATATGTGCCCGTCAGG +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTSGDSS*TYVPVR
Trigger: CCTGACGGGCACATATGTCCAGGAGGAGTCTCCGGA...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGACAGCGTCCACCCACATaGCAAACTGCGCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGQRPPT*QTAPPG
Trigger: CCCCGGAGGCGCAGTTTGCCATGTGGGTGGACGCTG...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGGAACAGACGGAGGAATaGCTGGGAGAATTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQEQTEE*LGELGS
Trigger: GCTACCTAATTCTCCCAGCCATTCCTCCGTCTGTTC...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAAAGGGATGCTGTGGTTTaGTTGACTACATTTGACTAC +
Preference number: 4 (lower is better)
Translates to: GTMQASSGWVKSQKRELQRDAVV*LTTFDY
Trigger: GTAGTCAAATGTAGTCAACCAAACCACAGCATCCCT...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCAGGGATGCTGTGGTTTaGTTGACTACATTTGACTAC +
Preference number: 4 (lower is better)
Translates to: ASHLLGQECGFPLISRTSRDAVV*LTTFDY
Trigger: GTAGTCAAATGTAGTCAACCAAACCACAGCATCCCT...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCCACCTGTTATACTTTTaGATACGAGTGAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: ASHLLGQECGFPLISRTSHLLYF*IRVSST
Trigger: AGTGGAGCTCACTCGTATCCAAAAGTATAACAGGTG...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCTGCTTACCGCTGCTCTaGGGTGGGTGTTTACTACAC +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSCLPLL*GGCLLH
Trigger: GTGTAGTAAACACCCACCCCAGAGCAGCGGTAAGCA...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGACTCTGCTGGCCACTCTaGCCCCATCTGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGLCWPL*PHLPTS
Trigger: GGAGGTGGGCAGATGGGGCCAGAGTGGCCAGCAGAG...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCGCTGTTCCCAACAGCTaGTGTGTTAAGGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIAVPNS*CVKGVC
Trigger: GCAAACCCCCTTAACACACCAGCTGTTGGGAACAGC...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCGCTGTTCCCAACAGCTaGTGTGTTAAGGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSAVPNS*CVKGVC
Trigger: GCAAACCCCCTTAACACACCAGCTGTTGGGAACAGC...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTCAGACGTTAGCTTCCTaGGCCAGTGTAGACTGTTCA +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGQTLAS*ASVDCS
Trigger: TGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTG...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTACAGAAACAGAAAACTaGCTGCAAGGTGGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGTETEN*LQGGLA
Trigger: GGCCAACCCACCTTGCAGCCAGTTTTCTGTTTCTGT...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 72 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTaGTGGCTTCTGCACCTGTTATACTTTTGGATACGA +
Preference number: 4 (lower is better)
Translates to: GRTMELSSRFSD*WLLHLLYFWIR
Trigger: TCGTATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTCTACAGAGTCTACGGTaGAGGCTGTGTGGAGCGAGT +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTLQSLR*RLCGAS
Trigger: ACTCGCTCCACACAGCCTTCACCGTAGACTCTGTAG...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGACAGTCTCCGCGAAGCTaGACGCGGGGGTGCAGATGT +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGQSPRS*TRGCRC
Trigger: ACATCTGCACCCCCGCGTTCAGCTTCGCGGAGACTG...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCATGGTTTTGGGGCCAGTaGCTCAGGAACTTGTCACTT +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSWFWGQ*LRNLSL
Trigger: AAGTGACAAGTTCCTGAGTCACTGGCCCCAAAACCA...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGTCGGAAGGACCAGTCTaGGGACTGTTTCTTAGTGAT +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQSEGPV*GLFLSD
Trigger: ATCACTAAGAAACAGTCCTCAGACTGGTCCTTCCGA...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCACTTCCAGTGTCTGCATaGGGCCCATTAGGATTCCAT +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSLPVSA*GPLGFH
Trigger: ATGGAATCCTAATGGGCCTCATGCAGACACTGGAAG...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAACTTCTGAGCGAGAATaGGGCGAGGCTGCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGTSERE*GEAAAS
Trigger: GGACGCGGCAGCCTCGCCGCATTCTCGCTCAGAAGT...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCCCTCCTCGGCTAATATaGTTTCTTCTCGGCGATGAC +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSPPRLI*FLLGDD
Trigger: GTCATCGCCGAGAAGAAAGCATATTAGCCGAGGAGG...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAAAAACCACCCCATCTTaGCAGAGTCCCTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSKTTPS*QSPLVL
Trigger: AAGGACCAAGGGACTCTGGCAAGATGGGGTGGTTTT...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGAAAACCACCCCATCTTaGCAGAGTCCCTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRKTTPS*QSPLVL
Trigger: AAGGACCAAGGGACTCTGGCAAGATGGGGTGGTTTT...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCAAAACCACCCCATCTTaGCAGAGTCCCTTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPKTTPS*QSPLVL
Trigger: AAGGACCAAGGGACTCTGGCAAGATGGGGTGGTTTT...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAGAACACCCCGGAGGCTaGCGGTGCGTGTGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGEHPGG*RCVWLH
Trigger: ATGAAGCCACACGCACCGGCAGCCTCCGGGGTGTTC...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGAAGACCCTCAAAAACTaGCTTTCCTTCTGCTACCAA +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQKTLKN*LSFCYQ
Trigger: TTGGTAGCAGAAGGAAAGGCAGTTTTTGAGGGTCTT...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGGAAATACAAACAGACTaGCAACGAGCTCTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLEIQTD*QRALGK
Trigger: TTTGCCCAGAGCTCGTTGGCAGTCTGTTTGTATTTC...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGACCTGCGGGGTGTTTCTaGTGCAGCCAGGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGPAGCF*CSQVCT
Trigger: GGTGCAGACCTGGCTGCAGCAGAAACACCCCGCAGG...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCTGCTCACCCTCGAGCTaGTCATTTCCTGGGATGAAA +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCICSPSS*SFPGMK
Trigger: TTTCATCCCAGGAAATGAGCAGCTCGAGGGTGAGCA...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTTGCTCACCCTCGAGCTaGTCATTTCCTGGGATGAAA +
Preference number: 4 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFCSPSS*SFPGMK
Trigger: TTTCATCCCAGGAAATGAGCAGCTCGAGGGTGAGCA...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAACGAGGCCGGAACCATaGAGGCCTCATCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGTRPEP*RPHQAG
Trigger: CCCAGCCTGATGAGGCCTGCATGGTTCCGGCCTCGT...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTAGAATCACCTGCCAATaGGGACATGTGACGCGAAGA +
Preference number: 4 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFRITCQ*GHVTRR
Trigger: TCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCT...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTGGCTTTCAGAGCCCATaGAAGTCTCTGCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTGFQSP*KSLLAT
Trigger: AGTGGCCAGCAGAGACTTGCATGGGCTCTGAAAGCC...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCACCTACAGGTACCCTGTaGCAGGCCAAAATGAAAACC +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSPTGTL*QAKMKT
Trigger: GGTTTTCATTTTGGCCTGGCACAGGGTACCTGTAGG...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGTTCCTTTCTTTCACCTaGATCTCAAGGCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLFLSFT*ISRQRP
Trigger: TGGCCTTTGCCTTGAGATGCAGGTGAAAGAAAGGAA...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCCCCATTAGGATTCCATaGACCTGGACTGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPPIRIP*TWTVLP
Trigger: AGGAAGGACAGTCCAGGTGCATGGAATCCTAATGGG...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGGAAGCAGCTTCTAAATaGACACTTTGCCACCCACCA +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQEAASK*TLCHPP
Trigger: TGGTGGGTGGCAAAGTGTGCATTTAGAAGCTGCTTC...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGAAACAGAAAACTGGCTaGAAGGTGGGTTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRKQKTG*KVGWPS
Trigger: GGAAGGCCAACCCACCTTGCAGCCAGTTTTCTGTTT...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATGGTTCTTGCTCTTACTaGGTTCCCAACGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TVVKVLRLVASAPVILLDGSCSY*VPNAPG
Trigger: ACCTGGAGCGTTGGGAACGCAGTAAGAGCAAGAACC...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATAGATGGAGTAGATGTTaGGGTGGACCGACTCGAAGC +
Preference number: 4 (lower is better)
Translates to: TVVKVLRLVASAPVILLDRWSRC*GGPTRS
Trigger: GCTTCGAGTCGGTCCACCCCAACATCTACTCCATCT...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304032.13
ENST00000336665.9
CDS-3UTR CCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCGAGTCCCTTGGTCCTTaGTTAGCAAAAGCCGTATCC +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSESLGP*LAKAVS
Trigger: GGATACGGCTTTTGCTAACCAAGGACCAAGGGACTC...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTCAAATGGCAGGACGATaGAACTGTCGTCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGQMAGR*NCRQGS
Trigger: AGAACCTTGACGACAGTTCCATCGTCCTGCCATTTG...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTTGCAGAGGAATCCTCTaGAAGGATGGCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LERGLYTIATSLCYFTHLCRGIL*KDGRAS
Trigger: GCTGGCCCTGCCATCCTTCCAGAGGATTCCTCTGCA...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAGGAGAGTTGGTGTCCTaGGCGCCACGGGGACCTAGA +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGGELVS*APRGPR
Trigger: TCTAGGTCCCCGTGGCGCCCAGGACACCAACTCTCC...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCATCACAGACGGGACACTaGCCACTTCTCTCTAATCAC +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSSQTGH*PLLSNH
Trigger: GTGATTAGAGAGAAGTGGCCAGTGTCCCGTCTGTGA...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATTGCTTACCGCTGCTCTaGGGTGGGTGTTTACTACAC +
Preference number: 4 (lower is better)
Translates to: TVVKVLRLVASAPVILLDCLPLL*GGCLLH
Trigger: GTGTAGTAAACACCCACCCCAGAGCAGCGGTAAGCA...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGGGAGTCTCTATCATATaGTTTCACCATCCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQGVSII*FHHPQV
Trigger: AACCTGAGGATGGTGAAACCATATGATAGAGACTCC...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTGGGGGTTTGCTCCACTaGGAAGATTCCCCAACACAC +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTGGLLH*EDSPTH
Trigger: GTGTGTTGGGGAATCTTCCCAGTGGAGCAAACCCCC...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCCAGACGTTAGCTTCCTaGGCCAGTGTAGACTGTTCA +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIQTLAS*ASVDCS
Trigger: TGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTG...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTAGGATTCCATGCACCTaGACTGTCCTTCCTCAAGTC +
Preference number: 4 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFRIPCT*TVLPQV
Trigger: GACTTGAGGAAGGACAGTCCAGGTGCATGGAATCCT...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTAGAGGGGCTGCAGTCTaGAGAATTAGATGTATTTCA +
Preference number: 4 (lower is better)
Translates to: IRLGEISEEGASMQGPCARGAAV*RIRCIS
Trigger: TGAAATACATCTAATTCTCCAGACTGCAGCCCCTCT...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGAGAGGGGCTGCAGTCTaGAGAATTAGATGTATTTCA +
Preference number: 4 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQRGAAV*RIRCIS
Trigger: TGAAATACATCTAATTCTCCAGACTGCAGCCCCTCT...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGGGAAACGCACCCCTGTaGCAAGATGAGAACCAAATT +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQGNAPL*QDENQI
Trigger: AATTTGGTTCTCATCTTGCCACAGGGGTGCGTTTCC...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCACAGAAACAGAAAACTaGCTGCAAGGTGGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCITETEN*LQGGLA
Trigger: GGCCAACCCACCTTGCAGCCAGTTTTCTGTTTCTGT...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCTCTTGTGGGGTAAGATaGGTCCACCAAGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSSCGVR*VHQVQA
Trigger: TGCTTGAACTTGGTGGACTCATCTTACCCCACAAGA...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTGTAGTTGCTGAGGCCTaGTCATACCGCATCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LERGLYTIATSLCYFTHLVVAEA*SYRISG
Trigger: CCCTGAGATGCGGTATGATCAGGCCTCAGCAACTAC...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGATGCACGGCAGACACCTaGGCGGAACAGACGGAGGAA +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGCTADT*AEQTEE
Trigger: TTCCTCCGTCTGTTCCGCGCAGGTGTCTGCCGTGCA...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTTGGGCACCCTCCCACTaGTGTTGTTCCGGTTATTGT +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTWAPSH*CCSGYC
Trigger: ACAATAACCGGAACAACAGCAGTGGGAGGGTGCCCA...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAGCGGGGTGTTTCTGCTaGAGCCAGGTCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGAGCFC*SQVCTT
Trigger: TGTGGTGCAGACCTGGCTGCAGCAGAAACACCCCGC...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTCCAGAACATCCTAAGTaGAGGGAGGGAGAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTPEHPK*REGELV
Trigger: CACCAACTCTCCCTCCCTGCACTTAGGATGTTCTGG...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTGCCCCTTCTCTCTCCTaGATAATGGGAGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTAPSLS*IMGGKL
Trigger: CAGCTTTCCTCCCATTATGCAGGAGAGAGAAGGGGC...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCAAACCCCAAACCAAGTaGTGTCATTTTACACCAAAA +
Preference number: 4 (lower is better)
Translates to: ASHLLGQECGFPLISRTSKPQTK*CHFTPK
Trigger: TTTTGGTGTAAAATGACAGCACTTGGTTTGGGGTTT...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTTCTAAATGCACACTTTaGCACCCACCATGCAACTGC +
Preference number: 4 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFSKCTL*HPPCNC
Trigger: GCAGTTGCATGGTGGGTGGCAAAGTGTGCATTTAGA...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCGAAGCAGCTTCTAAATaGACACTTTGCCACCCACCA +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSEAASK*TLCHPP
Trigger: TGGTGGGTGGCAAAGTGTGCATTTAGAAGCTGCTTC...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTAGATGGAGTAGATGTTaGGGTGGACCGACTCGAAGC +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTRWSRC*GGPTRS
Trigger: GCTTCGAGTCGGTCCACCCCAACATCTACTCCATCT...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304032.13
ENST00000336665.9
CDS-3UTR CCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATGAGTCCCTTGGTCCTTaGTTAGCAAAAGCCGTATCC +
Preference number: 4 (lower is better)
Translates to: TVVKVLRLVASAPVILLDESLGP*LAKAVS
Trigger: GGATACGGCTTTTGCTAACCAAGGACCAAGGGACTC...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTGGATACCGCAACGATaGAAAATCAGGCGAGGTACT +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRWIPQR*KIRRGT
Trigger: AGTACCTCGCCTGATTTTCCATCGTTGCGGTATCCA...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCTGGATACCGCAACGATaGAAAATCAGGCGAGGTACT +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIWIPQR*KIRRGT
Trigger: AGTACCTCGCCTGATTTTCCATCGTTGCGGTATCCA...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGCAAATGGCAGGACGATaGAACTGTCGTCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRQMAGR*NCRQGS
Trigger: AGAACCTTGACGACAGTTCCATCGTCCTGCCATTTG...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCACAAATGGCAGGACGATaGAACTGTCGTCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSQMAGR*NCRQGS
Trigger: AGAACCTTGACGACAGTTCCATCGTCCTGCCATTTG...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCAACACTTATCACACTaGTTTGAAACCTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLQHLSH*FETSLH
Trigger: GTGCAGTGAGGTTTCAAACCAGTGTGATAAGTGTTG...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAGCGCCTACGGCACATTaGAGGCTGCAGGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGAPTAH*RLQVEQ
Trigger: CTGCTCAACCTGCAGCCTCCAATGTGCCGTAGGCGC...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTCCGTGCCGGGAGGTTTaGGGTTTGCTTTCCAAACAC +
Preference number: 4 (lower is better)
Translates to: LERGLYTIATSLCYFTHLPCREV*GLLSKH
Trigger: GTGTTTGGAAAGCAAACCCCAAACCTCCCGGCACGG...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTACCGCTGCTCTGGGGTaGGTGTTTACTACACTGGTG +
Preference number: 4 (lower is better)
Translates to: LERGLYTIATSLCYFTHLTAALG*VFTTLV
Trigger: CACCAGTGTAGTAAACACCCACCCCAGAGCAGCGGT...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGATATTGGGCAGGGGGCTaGGCTGCTTCCAGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGYWAGG*AASSVC
Trigger: GCAGACACTGGAAGCAGCCCAGCCCCCTGCCCAATA...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCAACCAAATTCCAAGCTaGCAGAAGGGAAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPNQIPS*QKGRAS
Trigger: ACTGGCTCTTCCCTTCTGCCAGCTTGGAATTTGGTT...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAATGCTGTGGTTTGGTTaGCTACATTTGACTACCACC +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSMLWFG*LHLTTT
Trigger: GGTGGTAGTCAAATGTAGTCAACCAAACCACAGCAT...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCATGCTGTGGTTTGGTTaGCTACATTTGACTACCACC +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSMLWFG*LHLTTT
Trigger: GGTGGTAGTCAAATGTAGTCAACCAAACCACAGCAT...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCATGCTGTGGTTTGGTTaGCTACATTTGACTACCACC +
Preference number: 4 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPMLWFG*LHLTTT
Trigger: GGTGGTAGTCAAATGTAGTCAACCAAACCACAGCAT...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAACTTTTGGATACGAGTaGGCTCCACTTAGCTTCGTT +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSTFGYE*APLSFV
Trigger: AACGAAGCTAAGTGGAGCTCACTCGTATCCAAAAGT...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTACTTTTGGATACGAGTaGGCTCCACTTAGCTTCGTT +
Preference number: 4 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFTFGYE*APLSFV
Trigger: AACGAAGCTAAGTGGAGCTCACTCGTATCCAAAAGT...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTCCTCCTCGGCTAATATaGTTTCTTCTCGGCGATGAC +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTPPRLI*FLLGDD
Trigger: GTCATCGCCGAGAAGAAAGCATATTAGCCGAGGAGG...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTCCAGAACATCCTAAGTaGAGGGAGGGAGAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LERGLYTIATSLCYFTHLPEHPK*REGELV
Trigger: CACCAACTCTCCCTCCCTGCACTTAGGATGTTCTGG...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTGCCCCTTCTCTCTCCTaGATAATGGGAGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LERGLYTIATSLCYFTHLAPSLS*IMGGKL
Trigger: CAGCTTTCCTCCCATTATGCAGGAGAGAGAAGGGGC...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCTCCCCAACACACTCATaGCTTGTTTGGTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCISPTHS*LVWFLS
Trigger: AGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGA...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGCACCTGTTATACTTTTaGATACGAGTGAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQHLLYF*IRVSST
Trigger: AGTGGAGCTCACTCGTATCCAAAAGTATAACAGGTG...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTCACCTGTTATACTTTTaGATACGAGTGAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGHLLYF*IRVSST
Trigger: AGTGGAGCTCACTCGTATCCAAAAGTATAACAGGTG...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCAGGTTCTCAGACTTGTaGCTTCTGCACCTGTTATAC +
Preference number: 4 (lower is better)
Translates to: IYAISVSTTESTVKAVWSRFSDL*LLHLLY
Trigger: GTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCT...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTAGGTTCTCAGACTTGTaGCTTCTGCACCTGTTATAC +
Preference number: 4 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFRFSDL*LLHLLY
Trigger: GTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCT...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATCAAATGGCAGGACGATaGAACTGTCGTCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: TVVKVLRLVASAPVILLDQMAGR*NCRQGS
Trigger: AGAACCTTGACGACAGTTCCATCGTCCTGCCATTTG...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTCAACACTTATCACACTaGTTTGAAACCTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGQHLSH*FETSLH
Trigger: GTGCAGTGAGGTTTCAAACCAGTGTGATAAGTGTTG...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTTCACAGACGGGACACTaGCCACTTCTCTCTAATCAC +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTSQTGH*PLLSNH
Trigger: GTGATTAGAGAGAAGTGGCCAGTGTCCCGTCTGTGA...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGATCACCATCCTCAGGTTaGGGGAGTGCTCCCTACAGG +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGSPSSG*GSAPYR
Trigger: CCTGTAGGGAGCACTCCCCCAACCTGAGGATGGTGA...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTCACTCATGCCTTGTTTaGTTCCTTTCTTTCACCTGC +
Preference number: 4 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFHSCLV*FLSFTC
Trigger: GCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTG...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCACACTCATGCCTTGTTTaGTTCCTTTCTTTCACCTGC +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSHSCLV*FLSFTC
Trigger: GCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTG...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp GAAGATTCCCCAACACACTCATGCCTTGTTTGGTTCCTTTCTTTCACCTGCATCCACTCATGCCTTGTTTaGTTCCTTTCTTTCACCTGC +
Preference number: 4 (lower is better)
Translates to: EDSPTHSCLVWFLSFTCIHSCLV*FLSFTC
Trigger: GCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTG...GATGCAGGTGAAAGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGAATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATAACCAAATTCCAAGCTaGCAGAAGGGAAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: TVVKVLRLVASAPVILLDNQIPS*QKGRAS
Trigger: ACTGGCTCTTCCCTTCTGCCAGCTTGGAATTTGGTT...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGCTTCTGGTTAGACACTaGAATACAAACAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRLLVRH*NTNRLP
Trigger: TGGCAGTCTGTTTGTATTTCAGTGTCTAACCAGAAG...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTTGGTTTTGGGGCCAGTaGCTCAGGAACTTGTCACTT +
Preference number: 4 (lower is better)
Translates to: LERGLYTIATSLCYFTHLWFWGQ*LRNLSL
Trigger: AAGTGACAAGTTCCTGAGTCACTGGCCCCAAAACCA...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGAAGACCCTCAAAAACTaGCTTTCCTTCTGCTACCAA +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRKTLKN*LSFCYQ
Trigger: TTGGTAGCAGAAGGAAAGGCAGTTTTTGAGGGTCTT...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTAAGAGGGAGCTTCAATaGAAGGCCCTTGTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTKRELQ*KALVLK
Trigger: TTTCAGCACAAGGGCCTTGCATTGAAGCTCCCTCTT...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTAAACAGAAAACTGGCTaGAAGGTGGGTTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LERGLYTIATSLCYFTHLKQKTG*KVGWPS
Trigger: GGAAGGCCAACCCACCTTGCAGCCAGTTTTCTGTTT...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTTGGATACACCCACGCTaGCCTTCCATCTCTATACAC +
Preference number: 4 (lower is better)
Translates to: LERGLYTIATSLCYFTHLWIHPR*PSISIH
Trigger: GTGTATAGAGATGGAAGGGCAGCGTGGGTGTATCCA...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGACGCTGTTGTCCAGCGTaGGGTTCTTGCTCTTACTGC +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGRCCPA*GSCSYC
Trigger: GCAGTAAGAGCAAGAACCGCACGCTGGACAACAGCG...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAGGGCAGACTTGCCGCTaGCCAAGTTACCCACAATTC +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGGQTCR*PSYPQF
Trigger: GAATTGTGGGTAACTTGGCCAGCGGCAAGTCTGCCC...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATAGGTTCTCAGACTTGTaGCTTCTGCACCTGTTATAC +
Preference number: 4 (lower is better)
Translates to: TVVKVLRLVASAPVILLDRFSDL*LLHLLY
Trigger: GTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCT...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAAAGCACAAAACACGCTaGGAACCCGAGGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGKHKTR*EPEDGE
Trigger: CTCCCCATCCTCGGGTTCCCAGCGTGTTTTGTGCTT...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTGGAAACGCACCCCTGTaGCAAGATGAGAACCAAATT +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTGNAPL*QDENQI
Trigger: AATTTGGTTCTCATCTTGCCACAGGGGTGCGTTTCC...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
3UTR CAA 72 bp GTGAAAGACAGTAAGAATGGGTTTTCAGATTTAGGTTaGCTTACCGCTGCTCTGGGGTGGGTGTTTACTACA +
Preference number: 4 (lower is better)
Translates to: VKDSKNGFSDLG*LTAALGWVFTT
Trigger: TGTAGTAAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTTACTGTCTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAATTCCGGTGGATCCCTaGGCATTCGATGCACATGAG +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGIPVDP*AFDAHE
Trigger: CTCATGTGCATCGAATGCTCAGGGATCCACCGGAAT...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATCTTCTGGTTAGACACTaGAATACAAACAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: TVVKVLRLVASAPVILLDLLVRH*NTNRLP
Trigger: TGGCAGTCTGTTTGTATTTCAGTGTCTAACCAGAAG...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTTCGGAAGGACCAGTCTaGGGACTGTTTCTTAGTGAT +
Preference number: 4 (lower is better)
Translates to: LERGLYTIATSLCYFTHLSEGPV*GLFLSD
Trigger: ATCACTAAGAAACAGTCCTCAGACTGGTCCTTCCGA...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTGGCTTCATGTTTCTGTaGTACATGAGTCTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTGFMFL*YMSLVS
Trigger: GGACACTAGACTCATGTAGCACAGAAACATGAAGCC...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTGGTTTGAAACCTCACTaGACCCTGCAAGTTTCACAG +
Preference number: 4 (lower is better)
Translates to: LERGLYTIATSLCYFTHLGLKPH*TLQVSQ
Trigger: CTGTGAAACTTGCAGGGTGCAGTGAGGTTTCAAACC...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTGCTCTCTCCTGTGTGTaGTTTAGGGGAGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTALSCV*FRGVYE
Trigger: TTCATAAACTCCCCTAAACCACACACAGGAGAGAGC...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTATGCTGTGGTTTGGTTaGCTACATTTGACTACCACC +
Preference number: 4 (lower is better)
Translates to: LERGLYTIATSLCYFTHLMLWFG*LHLTTT
Trigger: GGTGGTAGTCAAATGTAGTCAACCAAACCACAGCAT...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAACCCCTGTGGCAAGATaGGAACCAAATTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGTPVAR*EPNSKL
Trigger: CAGCTTGGAATTTGGTTCTCATCTTGCCACAGGGGT...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAAAACCCCAAACCAAGTaGTGTCATTTTACACCAAAA +
Preference number: 4 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSKPQTK*CHFTPK
Trigger: TTTTGGTGTAAAATGACAGCACTTGGTTTGGGGTTT...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGAAACCCCAAACCAAGTaGTGTCATTTTACACCAAAA +
Preference number: 4 (lower is better)
Translates to: DETQTEKSNGRTMELSSRKPQTK*CHFTPK
Trigger: TTTTGGTGTAAAATGACAGCACTTGGTTTGGGGTTT...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTTTCCTTTCTTTCACCTaGATCTCAAGGCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LERGLYTIATSLCYFTHLFLSFT*ISRQRP
Trigger: TGGCCTTTGCCTTGAGATGCAGGTGAAAGAAAGGAA...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTCTTCTGGTTAGACACTaGAATACAAACAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: LERGLYTIATSLCYFTHLLLVRH*NTNRLP
Trigger: TGGCAGTCTGTTTGTATTTCAGTGTCTAACCAGAAG...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR TCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGATCTTGTGGGGTAAGATaGGTCCACCAAGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGSCGVR*VHQVQA
Trigger: TGCTTGAACTTGGTGGACTCATCTTACCCCACAAGA...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAAAGAGGGAGCTTCAATaGAAGGCCCTTGTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGKRELQ*KALVLK
Trigger: TTTCAGCACAAGGGCCTTGCATTGAAGCTCCCTCTT...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTCAACACTTATCACACTaGTTTGAAACCTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: LERGLYTIATSLCYFTHLQHLSH*FETSLH
Trigger: GTGCAGTGAGGTTTCAAACCAGTGTGATAAGTGTTG...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTGGAGTCTCTATCATATaGTTTCACCATCCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: LERGLYTIATSLCYFTHLGVSII*FHHPQV
Trigger: AACCTGAGGATGGTGAAACCATATGATAGAGACTCC...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGATCCCCAACACACTCATaGCTTGTTTGGTTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGSPTHS*LVWFLS
Trigger: AGAAAGGAACCAAACAAGGCATGAGTGTGTTGGGGA...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAAGGTTCTCAGACTTGTaGCTTCTGCACCTGTTATAC +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGRFSDL*LLHLLY
Trigger: GTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCT...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR GCA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGATGCATATATACATTGTaGACACACTTGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGCIYTL*THLGDR
Trigger: CCTGTCTCCCAAGTGTGTGCACAATGTATATATGCA...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS GCA 90 bp CGGCCGCGGCCTCGTCGCACGGCGCCCAGGCCAGGCTCCCGGAGCTaGTGTGGCGCCTTCCGCCGCCCAGTGTCCGGCCTTGCGGCGCCT +
Preference number: 5 (lower is better)
Translates to: RPRPRRTAPRPGSRS*CGAFRRPVSGLAAP
Trigger: AGGCGCCGCAAGGCCGGACACTGGGCGGCGGAAGGCGCCACAGCAGCTCCGGGAGCCTGGCCTGGGCGCCGTGCGACGAGGCCGCGGCCG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS GCA 90 bp CGAGCGCCGGGGCCGAGGGCCGACCCCTGGGCAGTGTGGCCGCGCTaGTCTGGGCTCCTGGCCGTGGCGTGGGTCCGCGCGCTGCGTACT +
Preference number: 5 (lower is better)
Translates to: RAPGPRADPWAVWPR*SGLLAVAWVRALRT
Trigger: AGTACGCAGCGCGCGGACCCACGCCACGGCCAGGAGCCCAGAGCAGCGCGGCCACACTGCCCAGGGGTCGGCCCTCGGCCCCGGCGCTCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409457.5
CDS CCA 90 bp GCGGGCTCGCCACTGCCGTCCAACAAGTACATGTCGCCCGCGCGCTaGGGCCCCGCCGCATCCAGCGAGCCCGCGGGCCGGGAGGGCGCC +
Preference number: 5 (lower is better)
Translates to: AGSPLPSNKYMSPAR*GPAASSEPAGREGA
Trigger: GGCGCCCTCCCGGCCCGCGGGCTCGCTGGATGCGGCGGGGCCCCAGCGCGCGGGCGACATGTACTTGTTGGACGGCAGTGGCGAGCCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS TCA 90 bp TCTCGGCGCTGGACGAGTGCGCTTCGGCCGGGGCCCGCCGCAGGCTaGAGTAGCCGCGTGGCCGCGAGGCTCCGCTCCGTGGCGAGGGCC +
Preference number: 5 (lower is better)
Translates to: SRRWTSALRPGPAAG*SSRVAARLRSVARA
Trigger: GGCCCTCGCCACGGAGCGGAGCCTCGCGGCCACGCGGCTACTTCAGCCTGCGGCGGGCCCCGGCCGAAGCGCACTCGTCCAGCGCCGAGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS GCA 90 bp TCCCGCGCGGCATCGCGTCCGCGGGTGGCGACGCGGGCTCGCCACTaGCGTCCAACAAGTACATGTCGCCCGCGCGCTGGGGCCCCGCCG +
Preference number: 5 (lower is better)
Translates to: SRAASRPRVATRARH*RPTSTCRPRAGAPP
Trigger: CGGCGGGGCCCCAGCGCGCGGGCGACATGTACTTGTTGGACGGCAGTGGCGAGCCCGCGTCGCCACCCGCGGACGCGATGCCGCGCGGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS GCA 90 bp CGCACGGCCGGAGCCGCCCCAGTTCCAGCTGCCCGGTGCTGCGGGTaGGGAAGGTGCGGAAATCCCAAGCGCGCGGCCGGGGACCCTCCG +
Preference number: 5 (lower is better)
Translates to: RTAGAAPVPAARCCG*GRCGNPKRAAGDPP
Trigger: CGGAGGGTCCCCGGCCGCGCGCTTGGGATTTCCGCACCTTCCGCACCCGCAGCACCGGGCAGCTGGAACTGGGGCGGCTCCGGCCGTGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS CCA 90 bp GCTCCGGCTGCACAGCTCGGCGGTTCCGCAGCCTCCGCCACTCCCTaGGCTCCGGGACGCGCGGACAGCTGCACCGGCTGCGGCCGAAGG +
Preference number: 5 (lower is better)
Translates to: APAAQLGGSAASATP*APGRADSCTGCGRR
Trigger: CCTTCGGCCGCAGCCGGTGCAGCTGTCCGCGCGTCCCGGAGCCCAGGGAGTGGCGGAGGCTGCGGAACCGCCGAGCTGTGCAGCCGGAGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS GCA 90 bp CAGGCGGCGGCGCCCGCGGCTTCATTGTCTACGACGCGGGGCCCGTaGGCATCCTCCCGCTCCGGCTGCACAGCTCGGCGGTTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: QAAAPAASLSTTRGP*ASSRSGCTARRFRS
Trigger: GCTGCGGAACCGCCGAGCTGTGCAGCCGGAGCGGGAGGATGCGCACGGGCCCCGCGTCGTAGACAATGAAGCCGCGGGCGCCGCCGCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS GCA 90 bp GAGGCCGCGCCGGCCCCGGCCGCCGCCCGCGCGCGCTCCAGCCGCTaGAGGTCGCTGTTGTCCAGCGTGCGGTTCTTGCTCTTACTGCGT +
Preference number: 5 (lower is better)
Translates to: EAAPAPAAARARSSR*RSLLSSVRFLLLLR
Trigger: ACGCAGTAAGAGCAAGAACCGCACGCTGGACAACAGCGACCTGCAGCGGCTGGAGCGCGCGCGGGCGGCGGCCGGGGCCGGCGCGGCCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS CCA 90 bp GGGCTCCGGGACGCGCGGACAGCTGCACCGGCTGCGGCCGAAGGGTaGCGGGTGGCGGGCGGCGGGCGGCGGTTTAAAATGGAAACGCGC +
Preference number: 5 (lower is better)
Translates to: GLRDARTAAPAAAEG*RVAGGGRRFKMETR
Trigger: GCGCGTTTCCATTTTAAACCGCCGCCCGCCGCCCGCCACCCGCCACCCTTCGGCCGCAGCCGGTGCAGCTGTCCGCGCGTCCCGGAGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS GCA 90 bp GGAGCCGCCCCAGTTCCAGCTGCCCGGTGCTGCGGGTGCGGAAGGTaGGGAAATCCCAAGCGCGCGGCCGGGGACCCTCCGGTTCCTCGG +
Preference number: 5 (lower is better)
Translates to: GAAPVPAARCCGCGR*GNPKRAAGDPPVPR
Trigger: CCGAGGAACCGGAGGGTCCCCGGCCGCGCGCTTGGGATTTCCGCACCTTCCGCACCCGCAGCACCGGGCAGCTGGAACTGGGGCGGCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CAA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGTGCACCAGGGCAGACTaGCCGCTGGCCAAGTTACCC +
Preference number: 5 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQCTRAD*PLAKLP
Trigger: GGGTAACTTGGCCAGCGGCAAGTCTGCCCTGGTGCA...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGGAGGGAAGGGTCGTCTaGGCCCTGATCAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQEGRVV*ALISTS
Trigger: GCTGGTGCTGATCAGGGCCAAGACGACCCTTCCCTC...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS GCA 90 bp CCGCCCGCGCGCGCTCCAGCCGCTGCAGGTCGCTGTTGTCCAGCGTaGGGTTCTTGCTCTTACTGCGTTCCCAACGCTCCAGGTCCGAGA +
Preference number: 5 (lower is better)
Translates to: PPARAPAAAGRCCPA*GSCSYCVPNAPGPR
Trigger: TCTCGGACCTGGAGCGTTGGGAACGCAGTAAGAGCAAGAACCGCACGCTGGACAACAGCGACCTGCAGCGGCTGGAGCGCGCGCGGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CAA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGCACCGTTTCAGGTCGTaGGAGAGCTTCCTCGCCCTG +
Preference number: 5 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQHRFRS*ESFLAL
Trigger: CAGGGCGAGGAAGCTCTCCAACGACCTGAAACGGTG...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCGCCGTGCCGGGAGGTTaGGGGTTTGCTTTCCAAACA +
Preference number: 5 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSAVPGG*GFAFQT
Trigger: TGTTTGGAAAGCAAACCCCAAACCTCCCGGCACGGC...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS TCA 90 bp TACTGCGTTCCCAACGCTCCAGGTCCGAGAGCGCGTCGTTCTTGCTaGGCACCTCGCCCACGTCCAGGGTGTTGCGCTTCTCCGAGGCGG +
Preference number: 5 (lower is better)
Translates to: YCVPNAPGPRARRSC*APRPRPGCCASPRR
Trigger: CCGCCTCGGAGAAGCGCAACACCCTGGACGTGGGCGAGGTGCTCAGCAAGAACGACGCGCTCTCGGACCTGGAGCGTTGGGAACGCAGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CAA 90 bp AACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGTTAACCGAGTCGCAGGCGCCTaGCAAGCCGCGGAGCCCGCT +
Preference number: 5 (lower is better)
Translates to: NSSGLQAIGRSGVHLYVNRVAGA*QAAEPA
Trigger: AGCGGGCTCCGCGGCTTGCAAGGCGCCTGCGACTCG...GTTAACATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR CAA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGCCAGGTTTTGTGATTTaGTTTGGGGTGAGAGTGGGT +
Preference number: 5 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQPGFVI*FGVRVG
Trigger: ACCCACTCTCACCCCAAACAAAATCACAAAACCTGG...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCTCGCGTCCCCATCCCTaGTGCCACCAGGACAAGGGT +
Preference number: 5 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCSRPHP*CHQDKG
Trigger: ACCCTTGTCCTGGTGGCACAAGGGATGGGGACGCGA...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACGAGGGAAGGGTCGTCTaGGCCCTGATCAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDEGRVV*ALISTS
Trigger: GCTGGTGCTGATCAGGGCCAAGACGACCCTTCCCTC...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCGAGCGGCTGCCCAGCTaGGGCGTCCCAAGGTCGGAT +
Preference number: 5 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTERLPS*GVPRSD
Trigger: ATCCGACCTTGGGACGCCCAAGCTGGGCAGCCGCTC...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGGAGCGGCTGCCCAGCTaGGGCGTCCCAAGGTCGGAT +
Preference number: 5 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAERLPS*GVPRSD
Trigger: ATCCGACCTTGGGACGCCCAAGCTGGGCAGCCGCTC...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GAAGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCTTGGTGGTAATTAGCTaGAAAGTGGGAACGAGAGTG +
Preference number: 5 (lower is better)
Translates to: EEPVQETCPRDPCDPPLSLVVIS*KVGTRV
Trigger: CACTCTCGTTCCCACTTTCAAGCTAATTACCACCAA...GGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp AGAGCCAGTGCAGGAGACCTGCCCCCGGGACCCGTGCGACCCTCCCCTCTCCAGCAGTGCATATATACATaGTGCACACACTTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: RASAGDLPPGPVRPSPLQQCIYT*CTHLGD
Trigger: GTCTCCCAAGTGTGTGCACAATGTATATATGCACTG...CTGGAGAGGGGAGGGTCGCACGGGTCCCGGGGGCAGGTCTCCTGCACTGGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGCTGAGAACCCTGCGATaGGCGAGTGACCCGCTGCCT +
Preference number: 5 (lower is better)
Translates to: PRAGFLVCALASVPSVFLLRTLR*ASDPLP
Trigger: AGGCAGCGGGTCACTCGCCAATCGCAGGGTTCTCAG...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCGCCGTGCCGGGAGGTTaGGGGTTTGCTTTCCAAACA +
Preference number: 5 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCAVPGG*GFAFQT
Trigger: TGTTTGGAAAGCAAACCCCAAACCTCCCGGCACGGC...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GGACAAACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGCACCGTTTCAGGTCGTaGGAGAGCTTCCTCGCCCTG +
Preference number: 5 (lower is better)
Translates to: GQTAAACKLSADLEFTSMHRFRS*ESFLAL
Trigger: CAGGGCGAGGAAGCTCTCCAACGACCTGAAACGGTG...CATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTTTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR CAA 90 bp GGACAAACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGCGAGAGGTGAACAGGTaGGACCGGCGCTTAGACTGC +
Preference number: 5 (lower is better)
Translates to: GQTAAACKLSADLEFTSMREVNR*DRRLDC
Trigger: GCAGTCTAAGCGCCGGTCCAACCTGTTCACCTCTCG...CATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTTTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR CAA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGAGTTGCCCCTTCTCCTaGTTCCTCGCCTCCCCTCCC +
Preference number: 5 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLSCPFS*FLASPP
Trigger: GGGAGGGGAGGCGAGGAACAAGGAGAAGGGGCAACT...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTGGGAGTCATGGCAGCTaGTGCTGGGGGCCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: TKTWALESGCGVEQMDITGSHGS*CWGPGR
Trigger: CCTTCCTGGCCCCCAGCACAAGCTGCCATGACTCCC...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCTCAGGAACTTGTCACTaGCTCACCCTCGAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCSGTCH*LTLELL
Trigger: GAGCAGCTCGAGGGTGAGCAAGTGACAAGTTCCTGA...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGTGGCTGCAAGGTGGGTaGGCCTTCCCTGCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLWLQGG*AFPAPA
Trigger: GGCAGGGGCAGGGAAGGCCAACCCACCTTGCAGCCA...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCCGAGTCGCAGGCGCCTaGCAAGCCGCGGAGCCCGCT +
Preference number: 5 (lower is better)
Translates to: IYAISVSTTESTVKAVWSRVAGA*QAAEPA
Trigger: AGCGGGCTCCGCGGCTTGCAAGGCGCCTGCGACTCG...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304032.13
CDS-3UTR CAA 90 bp AACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGTTAACTGCACCAGGGCAGACTaGCCGCTGGCCAAGTTACCC +
Preference number: 5 (lower is better)
Translates to: NSSGLQAIGRSGVHLYVNCTRAD*PLAKLP
Trigger: GGGTAACTTGGCCAGCGGCAAGTCTGCCCTGGTGCA...GTTAACATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR CAA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGCGAGAGGTGAACAGGTaGGACCGGCGCTTAGACTGC +
Preference number: 5 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLREVNR*DRRLDC
Trigger: GCAGTCTAAGCGCCGGTCCAACCTGTTCACCTCTCG...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCGACAGGCCGTCGGCTTaGAAGTTGCTAGTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCDRPSA*KLLVLF
Trigger: GAAAAGCACTAGCAACTTCAAAGCCGACGGCCTGTC...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTTCGCGTCCCCATCCCTaGTGCCACCAGGACAAGGGT +
Preference number: 5 (lower is better)
Translates to: TKTWALESGCGVEQMDITSRPHP*CHQDKG
Trigger: ACCCTTGTCCTGGTGGCACAAGGGATGGGGACGCGA...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCACATTGTGCACACACTaGGGAGACAGGACACTGCAC +
Preference number: 5 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCTLCTH*GDRTLH
Trigger: GTGCAGTGTCCTGTCTCCCAAGTGTGTGCACAATGT...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGTCACTCCCAACACCCTaGGAGCCTTCTCTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: PRAGFLVCALASVPSVFLSLPTP*EPSLFS
Trigger: GGAGAACAGAGAAGGCTCCAAGGGTGTTGGGAGTGA...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATGCCCAGTGTCCGGCCTaGCGGCGCCTCAGGCCCGCT +
Preference number: 5 (lower is better)
Translates to: TVVKVLRLVASAPVILLDAQCPA*RRLRPA
Trigger: AGCGGGCCTGAGGCGCCGCAAGGCCGGACACTGGGC...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CAA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGCGAGAGGTGAACAGGTaGGACCGGCGCTTAGACTGC +
Preference number: 5 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPREVNR*DRRLDC
Trigger: GCAGTCTAAGCGCCGGTCCAACCTGTTCACCTCTCG...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGAGTTGCCCCTTCTCCTaGTTCCTCGCCTCCCCTCCC +
Preference number: 5 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLSCPFS*FLASPP
Trigger: GGGAGGGGAGGCGAGGAACAAGGAGAAGGGGCAACT...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGGGGAGTCATGGCAGCTaGTGCTGGGGGCCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLGSHGS*CWGPGR
Trigger: CCTTCCTGGCCCCCAGCACAAGCTGCCATGACTCCC...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACTTCTGCTACCAAAACTaGGGCCCTAGAAAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDFCYQN*GPRKWL
Trigger: CAGCCACTTTCTAGGGCCCAAGTTTTGGTAGCAGAA...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGCTGAGAACCCTGCGATaGGCGAGTGACCCGCTGCCT +
Preference number: 5 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLLRTLR*ASDPLP
Trigger: AGGCAGCGGGTCACTCGCCAATCGCAGGGTTCTCAG...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGGAGGGAAGGGTCGTCTaGGCCCTGATCAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQEGRVV*ALISTS
Trigger: GCTGGTGCTGATCAGGGCCAAGACGACCCTTCCCTC...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGTCACTCCCAACACCCTaGGAGCCTTCTCTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: YGEGCVERVCLVDSNTNASLPTP*EPSLFS
Trigger: GGAGAACAGAGAAGGCTCCAAGGGTGTTGGGAGTGA...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTCACCGTTTCAGGTCGTaGGAGAGCTTCCTCGCCCTG +
Preference number: 5 (lower is better)
Translates to: IRLGEISEEGASMQGPCAHRFRS*ESFLAL
Trigger: CAGGGCGAGGAAGCTCTCCAACGACCTGAAACGGTG...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCGCACCTGTTATACTTTaGGATACGAGTGAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCAPVIL*DTSELH
Trigger: GTGGAGCTCACTCGTATCCAAAAGTATAACAGGTGC...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACTCAAGGTTCTCAGACTaGTGGCTTCTGCACCTGTTA +
Preference number: 5 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDSRFSD*WLLHLL
Trigger: TAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGA...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGACATTGTGCACACACTaGGGAGACAGGACACTGCAC +
Preference number: 5 (lower is better)
Translates to: YGEGCVERVCLVDSNTNATLCTH*GDRTLH
Trigger: GTGCAGTGTCCTGTCTCCCAAGTGTGTGCACAATGT...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCTGAGAACCCTGCGATaGGCGAGTGACCCGCTGCCT +
Preference number: 5 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLLRTLR*ASDPLP
Trigger: AGGCAGCGGGTCACTCGCCAATCGCAGGGTTCTCAG...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACCCCTTATTTAGCTTTTaGGGGAAGGATGAGGGTGAC +
Preference number: 5 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDPLFSF*GKDEGD
Trigger: GTCACCCTCATCCTTCCCCAAAAAGCTAAATAAGGG...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCTTTTCAGATTTAGGTTaGCTTACCGCTGCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCFSDLG*LTAALG
Trigger: CCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAA...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCGAGCGGCTGCCCAGCTaGGGCGTCCCAAGGTCGGAT +
Preference number: 5 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPERLPS*GVPRSD
Trigger: ATCCGACCTTGGGACGCCCAAGCTGGGCAGCCGCTC...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCTGGCTGCAAGGTGGGTaGGCCTTCCCTGCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPWLQGG*AFPAPA
Trigger: GGCAGGGGCAGGGAAGGCCAACCCACCTTGCAGCCA...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTGCGCCCGCGGCTTCATaGTCTACGACGCGGGGCCCG +
Preference number: 5 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTAPAAS*STTRGP
Trigger: CGGGCCCCGCGTCGTAGACAATGAAGCCGCGGGCGC...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CAA 90 bp GGACAAACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGGGGGTCTTTTGTGAGTaGCCGAACTTTCTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: GQTAAACKLSADLEFTSMGVFCE*PNFLEE
Trigger: CTCCTCCAGAAAGTTCGGCAACTCACAAAAGACCCC...CATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTTTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS-3UTR CAA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGTGCACCAGGGCAGACTaGCCGCTGGCCAAGTTACCC +
Preference number: 5 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQCTRAD*PLAKLP
Trigger: GGGTAACTTGGCCAGCGGCAAGTCTGCCCTGGTGCA...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTAGTTGCCCCTTCTCCTaGTTCCTCGCCTCCCCTCCC +
Preference number: 5 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGSCPFS*FLASPP
Trigger: GGGAGGGGAGGCGAGGAACAAGGAGAAGGGGCAACT...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GGGCCAGCGATCCAGTTCACTCTCTGCCTGTGTCGGAAGGACCAGTCTGAGGACATCCAAGTGTTCCGTTaGGTAGAGGGGAAATGTACT +
Preference number: 5 (lower is better)
Translates to: GPAIQFTLCLCRKDQSEDIQVFR*VEGKCT
Trigger: AGTACATTTCCCCTCTACCAAACGGAACACTTGGAT...GTCCTCAGACTGGTCCTTCCGACACAGGCAGAGAGTGAACTGGATCGCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATCAGGAACTTGTCACTaGCTCACCCTCGAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: GTMQASSGWVKSQKRELQSGTCH*LTLELL
Trigger: GAGCAGCTCGAGGGTGAGCAAGTGACAAGTTCCTGA...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGACTTATCACACTGGTTaGAAACCTCACTGCACCCTG +
Preference number: 5 (lower is better)
Translates to: PRAGFLVCALASVPSVFLTYHTG*KPHCTL
Trigger: CAGGGTGCAGTGAGGTTTCAAACCAGTGTGATAAGT...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp CAGCACCAGGGAGATGAGGGTTTAATTGGATTTAGGGGCAGCTGTTCCCAACAGGGAGCAAGGACCTCATaGATGCTGTTCCCCGCCATG +
Preference number: 5 (lower is better)
Translates to: QHQGDEGLIGFRGSCSQQGARTS*MLFPAM
Trigger: CATGGCGGGGAACAGCATCAATGAGGTCCTTGCTCC...CTGTTGGGAACAGCTGCCCCTAAATCCAATTAAACCCTCATCTCCCTGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GCAGGGGGCTGGGCTGCTTCCAGTGTCTGCATGAGGCCCATTAGGATTCCATGCCGTCTGAGGCAGCGGTaGGAAATAAATTACATTTCC +
Preference number: 5 (lower is better)
Translates to: AGGWAASSVCMRPIRIPCRLRQR*EINYIS
Trigger: GGAAATGTAATTTATTTCCAACCGCTGCCTCAGACG...GCATGGAATCCTAATGGGCCTCATGCAGACACTGGAAGCAGCCCAGCCCCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGTTTTCAGATTTAGGTTaGCTTACCGCTGCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: PRAGFLVCALASVPSVFLFSDLG*LTAALG
Trigger: CCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAA...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATCACTCCCAACACCCTaGGAGCCTTCTCTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: GTMQASSGWVKSQKRELQSLPTP*EPSLFS
Trigger: GGAGAACAGAGAAGGCTCCAAGGGTGTTGGGAGTGA...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATTGGCTGCAAGGTGGGTaGGCCTTCCCTGCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: TVVKVLRLVASAPVILLDWLQGG*AFPAPA
Trigger: GGCAGGGGCAGGGAAGGCCAACCCACCTTGCAGCCA...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS GCA 90 bp CCTGTCTTCTCACAGCAAGGACAAGCAACTGCCCATCGCATCCACTaGTCTCTCCAGATTCTCAGCTCAAAGGCTCTAAACTTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: PVFSQQGQATAHRIH*SLQILSSKALNLPP
Trigger: TGGGGGCAAGTTTAGAGCCTTTGAGCTGAGAATCTGGAGAGAGCAGTGGATGCGATGGGCAGTTGCTTGTCCTTGCTGTGAGAAGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402604.6
CDS-3UTR CAA 90 bp CCGATGTGGACTTCGACAAGGAGTCTCTATCATATGGTTTCACCATCCTCAGGTCGAGAGGTGAACAGGTaGGACCGGCGCTTAGACTGC +
Preference number: 5 (lower is better)
Translates to: PMWTSTRSLYHMVSPSSGREVNR*DRRLDC
Trigger: GCAGTCTAAGCGCCGGTCCAACCTGTTCACCTCTCG...ACCTGAGGATGGTGAAACCATATGATAGAGACTCCTTGTCGAAGTCCACATCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCATCGCGTCCCCATCCCTaGTGCCACCAGGACAAGGGT +
Preference number: 5 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSSRPHP*CHQDKG
Trigger: ACCCTTGTCCTGGTGGCACAAGGGATGGGGACGCGA...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGAGTTGCCCCTTCTCCTaGTTCCTCGCCTCCCCTCCC +
Preference number: 5 (lower is better)
Translates to: DETQTEKSNGRTMELSSRSCPFS*FLASPP
Trigger: GGGAGGGGAGGCGAGGAACAAGGAGAAGGGGCAACT...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ATTTATGCTATATCTGTGTCCACTACAGAGTCTACGGTGAAGGCTGTGTGGAGCAGTTGCCCCTTCTCCTaGTTCCTCGCCTCCCCTCCC +
Preference number: 5 (lower is better)
Translates to: IYAISVSTTESTVKAVWSSCPFS*FLASPP
Trigger: GGGAGGGGAGGCGAGGAACAAGGAGAAGGGGCAACT...GCTCCACACAGCCTTCACCGTAGACTCTGTAGTGGACACAGATATAGCATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTCGGGAGGTTTGGGGTTaGCTTTCCAAACACCTTTGC +
Preference number: 5 (lower is better)
Translates to: TKTWALESGCGVEQMDITREVWG*LSKHLC
Trigger: GCAAAGGTGTTTGGAAAGCAAACCCCAAACCTCCCG...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp TACGGTGAAGGCTGTGTGGAGCGAGTGTGTCTAGTGGACTCGAACACCAACGCGTTTTCAGATTTAGGTTaGCTTACCGCTGCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: YGEGCVERVCLVDSNTNAFSDLG*LTAALG
Trigger: CCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAA...CGCGTTGGTGTTCGAGTCCACTAGACACACTCGCTCCACACAGCCTTCACCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTATGAGGATATCCTGTTaGGGGCACATGGAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: IRLGEISEEGASMQGPCAMRISC*GHMERL
Trigger: CAGCCGCTCCATGTGCCCCAAACAGGATATCCTCAT...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp CCAGTGTCTTCTGTTTACCAAAGCTCTCCAAGCGGCTCAGACGTTAGCTTCCTGATGAGGATATCCTGTTaGGGGCACATGGAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: PVSSVYQSSPSGSDVSFLMRISC*GHMERL
Trigger: CAGCCGCTCCATGTGCCCCAAACAGGATATCCTCAT...CAGGAAGCTAACGTCTGAGCCGCTTGGAGAGCTTTGGTAAACAGAAGACACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GGACAAACAGCAGCGGCCTGCAAGCTATCGGCCGATCTGGAGTTCACCTCTATGCCTCCTGTAACCTCTTaGTTGGAAGGTGTCAAAGGT +
Preference number: 5 (lower is better)
Translates to: GQTAAACKLSADLEFTSMPPVTS*LEGVKG
Trigger: ACCTTTGACACCTTCCAACAAAGAGGTTACAGGAGG...CATAGAGGTGAACTCCAGATCGGCCGATAGCTTGCAGGCCGCTGCTGTTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409457.5
CDS GCA 90 bp ATCAGGGCCTTCCCAACCGTGGCTGTCATTATGATCACTTCCAGTTaGCTAACTGTTGGCAAACGTGTCGGGAGCCAGGCATCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: IRAFPTVAVIMITSS*LTVGKRVGSQASSK
Trigger: TTTGGAAGATGCCTGGCTCCCGACACGTTTGCCAACAGTTAGGCAACTGGAAGTGATCATAATGACAGCCACGGTTGGGAAGGCCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482882.1
CDS-3UTR CAA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCCGAGAGGTGAACAGGTaGGACCGGCGCTTAGACTGC +
Preference number: 5 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPREVNR*DRRLDC
Trigger: GCAGTCTAAGCGCCGGTCCAACCTGTTCACCTCTCG...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCTTGGTGGTAATTAGCTaGAAAGTGGGAACGAGAGTG +
Preference number: 5 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTLVVIS*KVGTRV
Trigger: CACTCTCGTTCCCACTTTCAAGCTAATTACCACCAA...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGACTTATCACACTGGTTaGAAACCTCACTGCACCCTG +
Preference number: 5 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLTYHTG*KPHCTL
Trigger: CAGGGTGCAGTGAGGTTTCAAACCAGTGTGATAAGT...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp CCACGGGCAGGTTTCCTGGTGTGTGCACTGGCTTCGGTCCCATCAGTGTTTCTGAGCAGAATATACATGTaGAGAAAAGTGGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: PRAGFLVCALASVPSVFLSRIYM*RKVGRF
Trigger: GAACCTGCCCACTTTTCTCAACATGTATATTCTGCT...CAGAAACACTGATGGGACCGAAGCCAGTGCACACACCAGGAAACCTGCCCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS CCA 90 bp CCCAACCGTGGCTGTCATTATGATCACTTCCAGTTGCCTAACTGTTaGCAAACGTGTCGGGAGCCAGGCATCTTCCAAAGTTCCTACCTT +
Preference number: 5 (lower is better)
Translates to: PNRGCHYDHFQLPNC*QTCREPGIFQSSYL
Trigger: AAGGTAGGAACTTTGGAAGATGCCTGGCTCCCGACACGTTTGCCAACAGTTAGGCAACTGGAAGTGATCATAATGACAGCCACGGTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482882.1
CDS-3UTR CAA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATCGAGAGGTGAACAGGTaGGACCGGCGCTTAGACTGC +
Preference number: 5 (lower is better)
Translates to: TVVKVLRLVASAPVILLDREVNR*DRRLDC
Trigger: GCAGTCTAAGCGCCGGTCCAACCTGTTCACCTCTCG...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp TCTCCAAGCGGCTCAGACGTTAGCTTCCTGGGCCAGTGTAGACTGTTCAGCACCCTCAAAATTTTCTTCTaGTTCTTCAGCAGTGCCGGA +
Preference number: 5 (lower is better)
Translates to: SPSGSDVSFLGQCRLFSTLKIFF*FFSSAG
Trigger: TCCGGCACTGCTGAAGAACAAGAAGAAAATTTTGAG...GGTGCTGAACAGTCTACACTGGCCCAGGAAGCTAACGTCTGAGCCGCTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTCCAGGTTTTGTGATTTaGTTTGGGGTGAGAGTGGGT +
Preference number: 5 (lower is better)
Translates to: TKTWALESGCGVEQMDITPGFVI*FGVRVG
Trigger: ACCCACTCTCACCCCAAACAAAATCACAAAACCTGG...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTTCGCGTCCCCATCCCTaGTGCCACCAGGACAAGGGT +
Preference number: 5 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTSRPHP*CHQDKG
Trigger: ACCCTTGTCCTGGTGGCACAAGGGATGGGGACGCGA...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTGCACCTGTTATACTTTaGGATACGAGTGAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: TKTWALESGCGVEQMDITAPVIL*DTSELH
Trigger: GTGGAGCTCACTCGTATCCAAAAGTATAACAGGTGC...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTTCAAGGTTCTCAGACTaGTGGCTTCTGCACCTGTTA +
Preference number: 5 (lower is better)
Translates to: TKTWALESGCGVEQMDITSRFSD*WLLHLL
Trigger: TAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGA...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGGAGCAAGGACCTCATaGATGCTGTTCCCCGCCATG +
Preference number: 5 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSGARTS*MLFPAM
Trigger: CATGGCGGGGAACAGCATCAATGAGGTCCTTGCTCC...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp TCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCGGGAGGTTTGGGGTTaGCTTTCCAAACACCTTTGC +
Preference number: 5 (lower is better)
Translates to: SNGRTMELSSRFSDLWLLREVWG*LSKHLC
Trigger: GCAAAGGTGTTTGGAAAGCAAACCCCAAACCTCCCG...CAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGCCGTGCCGGGAGGTTaGGGGTTTGCTTTCCAAACA +
Preference number: 5 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSAVPGG*GFAFQT
Trigger: TGTTTGGAAAGCAAACCCCAAACCTCCCGGCACGGC...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACCAAAACTTGGGCCCTAGAAAGTGGCTGCGGAGTGGAGCAGATGGACATCACTCCCTTATTTAGCTTTTaGGGGAAGGATGAGGGTGAC +
Preference number: 5 (lower is better)
Translates to: TKTWALESGCGVEQMDITPLFSF*GKDEGD
Trigger: GTCACCCTCATCCTTCCCCAAAAAGCTAAATAAGGG...AGTGATGTCCATCTGCTCCACTCCGCAGCCACTTTCTAGGGCCCAAGTTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GAATCCCTTTCCAGAATCACCTGCCAATGCGGACATGTGACGCGAAGAAAGCCGCCCTTATTTAGCTTTTaGGGGAAGGATGAGGGTGAC +
Preference number: 5 (lower is better)
Translates to: ESLSRITCQCGHVTRRKPPLFSF*GKDEGD
Trigger: GTCACCCTCATCCTTCCCCAAAAAGCTAAATAAGGG...CGGCTTTCTTCGCGTCACATGTCCGCATTGGCAGGTGATTCTGGAAAGGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGACCCACGTCCAGGGTGTaGCGCTTCTCCGAGGCGGGC +
Preference number: 5 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGPTSRV*RFSEAG
Trigger: GCCCGCCTCGGAGAAGCGCAACACCCTGGACGTGGG...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS-3UTR CAA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGCTCAAAATTTTCTTCTaGTTCTTCAGCAGTGCCGGA +
Preference number: 5 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLLKIFF*FFSSAG
Trigger: TCCGGCACTGCTGAAGAACAAGAAGAAAATTTTGAG...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCTTGGTGGTAATTAGCTaGAAAGTGGGAACGAGAGTG +
Preference number: 5 (lower is better)
Translates to: ASHLLGQECGFPLISRTSLVVIS*KVGTRV
Trigger: CACTCTCGTTCCCACTTTCAAGCTAATTACCACCAA...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTCAGGAACTTGTCACTaGCTCACCCTCGAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: DETQTEKSNGRTMELSSRSGTCH*LTLELL
Trigger: GAGCAGCTCGAGGGTGAGCAAGTGACAAGTTCCTGA...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACATTGTGCACACACTaGGGAGACAGGACACTGCAC +
Preference number: 5 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQTLCTH*GDRTLH
Trigger: GTGCAGTGTCCTGTCTCCCAAGTGTGTGCACAATGT...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GCTTCCCACCTCCTGGGGCAGGAATGTGGATTTCCTCTCATTTCCAGAACATCCCAGTGCATATATACATaGTGCACACACTTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: ASHLLGQECGFPLISRTSQCIYT*CTHLGD
Trigger: GTCTCCCAAGTGTGTGCACAATGTATATATGCACTG...GGATGTTCTGGAAATGAGAGGAAATCCACATTCCTGCCCCAGGAGGTGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATGGAGCAAGGACCTCATaGATGCTGTTCCCCGCCATG +
Preference number: 5 (lower is better)
Translates to: TVVKVLRLVASAPVILLDGARTS*MLFPAM
Trigger: CATGGCGGGGAACAGCATCAATGAGGTCCTTGCTCC...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGAGCAGAATATACATGTaGAGAAAAGTGGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: GRTMELSSRFSDLWLLHLSRIYM*RKVGRF
Trigger: GAACCTGCCCACTTTTCTCAACATGTATATTCTGCT...CAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGTTCCATCGTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAATGCAAGGCCCTTGTGCTAGAAATGCATCTCAGTaGTCACCTTTGAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: IRLGEISEEGASMQGPCARNASQ*SPLSCS
Trigger: GGAGCAGCTCAAAGGTGACAACTGAGATGCATTTCT...AGCACAAGGGCCTTGCATTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGACAGGCCGTCGGCTTaGAAGTTGCTAGTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSDRPSA*KLLVLF
Trigger: GAAAAGCACTAGCAACTTCAAAGCCGACGGCCTGTC...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GGAACCATGCAGGCCTCATCAGGCTGGGTGAAATCTCAGAAGAGGGAGCTTCAACTCAAAATTTTCTTCTaGTTCTTCAGCAGTGCCGGA +
Preference number: 5 (lower is better)
Translates to: GTMQASSGWVKSQKRELQLKIFF*FFSSAG
Trigger: TCCGGCACTGCTGAAGAACAAGAAGAAAATTTTGAG...TTGAAGCTCCCTCTTCTGAGATTTCACCCAGCCTGATGAGGCCTGCATGGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAGGGAGTCATGGCAGCTaGTGCTGGGGGCCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGGSHGS*CWGPGR
Trigger: CCTTCCTGGCCCCCAGCACAAGCTGCCATGACTCCC...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTGGTGCTTGCCTAGAGTaGCAGAGGAATCCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFGACLE*QRNPLE
Trigger: TTCCAGAGGATTCCTCTGCAACTCTAGGCAAGCACC...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGGGTGCTTGCCTAGAGTaGCAGAGGAATCCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: DETQTEKSNGRTMELSSRGACLE*QRNPLE
Trigger: TTCCAGAGGATTCCTCTGCAACTCTAGGCAAGCACC...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCCGGGAGGTTTGGGGTTaGCTTTCCAAACACCTTTGC +
Preference number: 5 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPREVWG*LSKHLC
Trigger: GCAAAGGTGTTTGGAAAGCAAACCCCAAACCTCCCG...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATTCCAGCGTGCGGTTCTaGCTCTTACTGCGTTCCCAA +
Preference number: 5 (lower is better)
Translates to: TVVKVLRLVASAPVILLDSSVRF*LLLRSQ
Trigger: TTGGGAACGCAGTAAGAGCAAGAACCGCACGCTGGA...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS TCA 90 bp CGTCTGCTCAAGACCAACTTTAAACACAGACATTCCTATGCCGGATaGATCGGAATTCCCGAATTCCTACAGGTTATCAGGGCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: RLLKTNFKHRHSYAG*IGIPEFLQVIRAFP
Trigger: TGGGAAGGCCCTGATAACCTGTAGGAATTCGGGAATTCCGATTCATCCGGCATAGGAATGTCTGTGTTTAAAGTTGGTCTTGAGCAGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482882.1
CDS-3UTR CAA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCTTCTGCTACCAAAACTaGGGCCCTAGAAAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPFCYQN*GPRKWL
Trigger: CAGCCACTTTCTAGGGCCCAAGTTTTGGTAGCAGAA...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGACACCGTTTCAGGTCGTaGGAGAGCTTCCTCGCCCTG +
Preference number: 5 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGHRFRS*ESFLAL
Trigger: CAGGGCGAGGAAGCTCTCCAACGACCTGAAACGGTG...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp CGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCAGATCCAAGTGTTCCGTTaGGTAGAGGGGAAATGTACT +
Preference number: 5 (lower is better)
Translates to: RRLKNQMAGRWNCRQGSQIQVFR*VEGKCT
Trigger: AGTACATTTCCCCTCTACCAAACGGAACACTTGGAT...CTGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCTCAAGGTTCTCAGACTaGTGGCTTCTGCACCTGTTA +
Preference number: 5 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPSRFSD*WLLHLL
Trigger: TAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGA...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGTTCTCATCAAGGTTCTCAGACTaGTGGCTTCTGCACCTGTTA +
Preference number: 5 (lower is better)
Translates to: TQTEKSNGRTMELSSRFSSRFSD*WLLHLL
Trigger: TAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGA...TGAGAACCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATCCAGGTTTTGTGATTTaGTTTGGGGTGAGAGTGGGT +
Preference number: 5 (lower is better)
Translates to: TVVKVLRLVASAPVILLDPGFVI*FGVRVG
Trigger: ACCCACTCTCACCCCAAACAAAATCACAAAACCTGG...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGATCCAAGTGTTCCGTTaGGTAGAGGGGAAATGTACT +
Preference number: 5 (lower is better)
Translates to: DETQTEKSNGRTMELSSRIQVFR*VEGKCT
Trigger: AGTACATTTCCCCTCTACCAAACGGAACACTTGGAT...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp AAGAATGGGTTTTCAGATTTAGGTTTGCTTACCGCTGCTCTGGGGTGGGTGTTTCAGTGCATATATACATaGTGCACACACTTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: KNGFSDLGLLTAALGWVFQCIYT*CTHLGD
Trigger: GTCTCCCAAGTGTGTGCACAATGTATATATGCACTG...AAACACCCACCCCAGAGCAGCGGTAAGCAAACCTAAATCTGAAAACCCATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATAGAAATGCATCTCAGTaGTCACCTTTGAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: TVVKVLRLVASAPVILLDRNASQ*SPLSCS
Trigger: GGAGCAGCTCAAAGGTGACAACTGAGATGCATTTCT...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp GATGAAACGCAGACTGAAAAATCAAATGGCAGGACGATGGAACTGTCGTCAAGGCTCAAAATTTTCTTCTaGTTCTTCAGCAGTGCCGGA +
Preference number: 5 (lower is better)
Translates to: DETQTEKSNGRTMELSSRLKIFF*FFSSAG
Trigger: TCCGGCACTGCTGAAGAACAAGAAGAAAATTTTGAG...CCTTGACGACAGTTCCATCGTCCTGCCATTTGATTTTTCAGTCTGCGTTTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTGCACCTGTTATACTTTaGGATACGAGTGAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTAPVIL*DTSELH
Trigger: GTGGAGCTCACTCGTATCCAAAAGTATAACAGGTGC...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCAGCAGAATATACATGTaGAGAAAAGTGGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPSRIYM*RKVGRF
Trigger: GAACCTGCCCACTTTTCTCAACATGTATATTCTGCT...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAGACAGGCCGTCGGCTTaGAAGTTGCTAGTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGDRPSA*KLLVLF
Trigger: GAAAAGCACTAGCAACTTCAAAGCCGACGGCCTGTC...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ACTGTCGTCAAGGTTCTCAGACTTGTGGCTTCTGCACCTGTTATACTTTTGGATCTCAAAATTTTCTTCTaGTTCTTCAGCAGTGCCGGA +
Preference number: 5 (lower is better)
Translates to: TVVKVLRLVASAPVILLDLKIFF*FFSSAG
Trigger: TCCGGCACTGCTGAAGAACAAGAAGAAAATTTTGAG...ATCCAAAAGTATAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGACGACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp TTAGAAAGAGGTCTCTACACCATAGCCACCTCTCTCTGTTACTTTACACATCTTCCAGGTTTTGTGATTTaGTTTGGGGTGAGAGTGGGT +
Preference number: 5 (lower is better)
Translates to: LERGLYTIATSLCYFTHLPGFVI*FGVRVG
Trigger: ACCCACTCTCACCCCAAACAAAATCACAAAACCTGG...AAGATGTGTAAAGTAACAGAGAGAGGTGGCTATGGTGTAGAGACCTCTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp CATCCCAAAGAGAAGCCTCAAGGAGTTCCGTTTCTTCTCAAAAGAAACTTCACTCGTCTGAGGCAGCGGTaGGAAATAAATTACATTTCC +
Preference number: 5 (lower is better)
Translates to: HPKEKPQGVPFLLKRNFTRLRQR*EINYIS
Trigger: GGAAATGTAATTTATTTCCAACCGCTGCCTCAGACG...AGTGAAGTTTCTTTTGAGAAGAAACGGAACTCCTTGAGGCTTCTCTTTGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp TCATCGTCACGTCACAGAACTGAACATGGAAATGAACAACGAAAACTCCACCCCAGGAAAGCTGACATTTaGCTGAAAAGCAACCTAATG +
Preference number: 5 (lower is better)
Translates to: SSSRHRTEHGNEQRKLHPRKADI*LKSNLM
Trigger: CATTAGGTTGCTTTTCAGCAAAATGTCAGCTTTCCT...GGGGTGGAGTTTTCGTTGTTCATTTCCATGTTCAGTTCTGTGACGTGACGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGATTCTGCTACCAAAACTaGGGCCCTAGAAAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGFCYQN*GPRKWL
Trigger: CAGCCACTTTCTAGGGCCCAAGTTTTGGTAGCAGAA...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGATCAAGGTTCTCAGACTaGTGGCTTCTGCACCTGTTA +
Preference number: 5 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGSRFSD*WLLHLL
Trigger: TAACAGGTGCAGAAGCCACAAGTCTGAGAACCTTGA...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409538.5
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAAGAAATGCATCTCAGTaGTCACCTTTGAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGRNASQ*SPLSCS
Trigger: GGAGCAGCTCAAAGGTGACAACTGAGATGCATTTCT...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS-3UTR CAA 90 bp ATTTACAATAGCTACACAGTGATGAAACGCAGACTGAAAAATCAAATGGCAGGAAGGAAAGCTGACATTTaGCTGAAAAGCAACCTAATG +
Preference number: 5 (lower is better)
Translates to: IYNSYTVMKRRLKNQMAGRKADI*LKSNLM
Trigger: CATTAGGTTGCTTTTCAGCAAAATGTCAGCTTTCCT...TCCTGCCATTTGATTTTTCAGTCTGCGTTTCATCACTGTGTAGCTATTGTAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000428334.6
ENST00000614409.4
CDS GCA 72 bp TCCGCCACTCCCTGGGCTCCGGGACGCGCGGACAGCTaGACCGGCTGCGGCCGAAGGGTGGCGGGTGGCGGG +
Preference number: 6 (lower is better)
Translates to: SATPWAPGRADS*TGCGRRVAGGG
Trigger: CCCGCCACCCGCCACCCTTCGGCCGCAGCCGGTGCAGCTGTCCGCGCGTCCCGGAGCCCAGGGAGTGGCGGA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS TCA 72 bp CGCCCGGGCCCCCGTCCCTGCGCGCGAAGATGCCGCTaGAGAAGCGCAGCAGCCGGTGCTCCGAGGCCGCGC +
Preference number: 6 (lower is better)
Translates to: RPGPRPCARRCR*RSAAAGAPRPR
Trigger: GCGCGGCCTCGGAGCACCGGCTGCTGCGCTTCTTCAGCGGCATCTTCGCGCGCAGGGACGGGGGCCCGGGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS TCA 72 bp TGGACGAGTGCGCTTCGGCCGGGGCCCGCCGCAGGCTaGAGTAGCCGCGTGGCCGCGAGGCTCCGCTCCGTG +
Preference number: 6 (lower is better)
Translates to: WTSALRPGPAAG*SSRVAARLRSV
Trigger: CACGGAGCGGAGCCTCGCGGCCACGCGGCTACTTCAGCCTGCGGCGGGCCCCGGCCGAAGCGCACTCGTCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS GCA 72 bp GCGCCGCGGCGGGTGCGGCCGGCCCCGAAGGAGGCTTaGTCGGGTGACTTCCTGAGCCGCAGCCGCCTTCCA +
Preference number: 6 (lower is better)
Translates to: APRRVRPAPKEA*SGDFLSRSRLP
Trigger: TGGAAGGCGGCTGCGGCTCAGGAAGTCACCCGAGCAAGCCTCCTTCGGGGCCGGCCGCACCCGCCGCGGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304032.13
ENST00000336665.9
ENST00000409457.5
CDS GCA 72 bp CCTCGTCGCACGGCGCCCAGGCCAGGCTCCCGGAGCTaGTGTGGCGCCTTCCGCCGCCCAGTGTCCGGCCTT +
Preference number: 6 (lower is better)
Translates to: PRRTAPRPGSRS*CGAFRRPVSGL
Trigger: AAGGCCGGACACTGGGCGGCGGAAGGCGCCACAGCAGCTCCGGGAGCCTGGCCTGGGCGCCGTGCGACGAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS GCA 72 bp CCCACGTCCAGGGTGTTGCGCTTCTCCGAGGCGGGCTaGGTGGCGGTCGCGGGCTCCAGGGTGGTCCCGGCC +
Preference number: 6 (lower is better)
Translates to: PTSRVLRFSEAG*VAVAGSRVVPA
Trigger: GGCCGGGACCACCCTGGAGCCCGCGACCGCCACGCAGCCCGCCTCGGAGAAGCGCAACACCCTGGACGTGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS CCA 72 bp CCACTGCCGTCCAACAAGTACATGTCGCCCGCGCGCTaGGGCCCCGCCGCATCCAGCGAGCCCGCGGGCCGG +
Preference number: 6 (lower is better)
Translates to: PLPSNKYMSPAR*GPAASSEPAGR
Trigger: CCGGCCCGCGGGCTCGCTGGATGCGGCGGGGCCCCAGCGCGCGGGCGACATGTACTTGTTGGACGGCAGTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS CCA 72 bp CATCTCTGCGCGGGGAGCCGTCGATGCTCTCGGCGCTaGACGAGTGCGCTTCGGCCGGGGCCCGCCGCAGGC +
Preference number: 6 (lower is better)
Translates to: HLCAGSRRCSRR*TSALRPGPAAG
Trigger: GCCTGCGGCGGGCCCCGGCCGAAGCGCACTCGTCCAGCGCCGAGAGCATCGACGGCTCCCCGCGCAGAGATG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS GCA 72 bp GCGCCCGCGGCTTCATTGTCTACGACGCGGGGCCCGTaGGCATCCTCCCGCTCCGGCTGCACAGCTCGGCGG +
Preference number: 6 (lower is better)
Translates to: APAASLSTTRGP*ASSRSGCTARR
Trigger: CCGCCGAGCTGTGCAGCCGGAGCGGGAGGATGCGCACGGGCCCCGCGTCGTAGACAATGAAGCCGCGGGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS GCA 72 bp GGAGCCGCCCCAGTTCCAGCTGCCCGGTGCTGCGGGTaGGGAAGGTGCGGAAATCCCAAGCGCGCGGCCGGG +
Preference number: 6 (lower is better)
Translates to: GAAPVPAARCCG*GRCGNPKRAAG
Trigger: CCCGGCCGCGCGCTTGGGATTTCCGCACCTTCCGCACCCGCAGCACCGGGCAGCTGGAACTGGGGCGGCTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS GCA 72 bp GCATCGCGTCCGCGGGTGGCGACGCGGGCTCGCCACTaGCGTCCAACAAGTACATGTCGCCCGCGCGCTGGG +
Preference number: 6 (lower is better)
Translates to: ASRPRVATRARH*RPTSTCRPRAG
Trigger: CCCAGCGCGCGGGCGACATGTACTTGTTGGACGGCAGTGGCGAGCCCGCGTCGCCACCCGCGGACGCGATGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS GCA 72 bp ACGGCCGGAGCCGCCCCAGTTCCAGCTGCCCGGTGCTaGGGGTGCGGAAGGTGCGGAAATCCCAAGCGCGCG +
Preference number: 6 (lower is better)
Translates to: TAGAAPVPAARC*GCGRCGNPKRA
Trigger: CGCGCGCTTGGGATTTCCGCACCTTCCGCACCCGCAGCACCGGGCAGCTGGAACTGGGGCGGCTCCGGCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS GCA 72 bp CGCACGGCCGGAGCCGCCCCAGTTCCAGCTGCCCGGTaGTGCGGGTGCGGAAGGTGCGGAAATCCCAAGCGC +
Preference number: 6 (lower is better)
Translates to: RTAGAAPVPAAR*CGCGRCGNPKR
Trigger: GCGCTTGGGATTTCCGCACCTTCCGCACCCGCAGCACCGGGCAGCTGGAACTGGGGCGGCTCCGGCCGTGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS GCA 72 bp CTGCTGTGGCGCCTTCCGCCGCCCAGTGTCCGGCCTTaGGGCGCCTCAGGCCCGCTCCAGTGCCTGAAGCTC +
Preference number: 6 (lower is better)
Translates to: LLWRLPPPSVRP*GASGPLQCLKL
Trigger: GAGCTTCAGGCACTGGAGCGGGCCTGAGGCGCCGCAAGGCCGGACACTGGGCGGCGGAAGGCGCCACAGCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS CCA 72 bp GGACAGCTGCACCGGCTGCGGCCGAAGGGTGGCGGGTaGCGGGCGGCGGGCGGCGGTTTAAAATGGAAACGC +
Preference number: 6 (lower is better)
Translates to: GQLHRLRPKGGG*RAAGGGLKWKR
Trigger: GCGTTTCCATTTTAAACCGCCGCCCGCCGCCCGCCACCCGCCACCCTTCGGCCGCAGCCGGTGCAGCTGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS CAA 90 bp GAGAGCGCGTCGTTCTTGCTGAGCACCTCGCCCACGTCCAGGGTGTaGCGCTTCTCCGAGGCGGGCTGCGTGGCGGTCGCGGGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: ESASFLLSTSPTSRV*RFSEAGCVAVAGSR
Trigger: CCTGGAGCCCGCGACCGCCACGCAGCCCGCCTCGGAGAAGCGCAACACCCTGGACGTGGGCGAGGTGCTCAGCAAGAACGACGCGCTCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS CAA 72 bp TCGTTCTTGCTGAGCACCTCGCCCACGTCCAGGGTGTaGCGCTTCTCCGAGGCGGGCTGCGTGGCGGTCGCG +
Preference number: 6 (lower is better)
Translates to: SFLLSTSPTSRV*RFSEAGCVAVA
Trigger: CGCGACCGCCACGCAGCCCGCCTCGGAGAAGCGCAACACCCTGGACGTGGGCGAGGTGCTCAGCAAGAACGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS CAA 72 bp CGTTCCCAACGCTCCAGGTCCGAGAGCGCGTCGTTCTaGCTGAGCACCTCGCCCACGTCCAGGGTGTTGCGC +
Preference number: 6 (lower is better)
Translates to: RSQRSRSESASF*LSTSPTSRVLR
Trigger: GCGCAACACCCTGGACGTGGGCGAGGTGCTCAGCAAGAACGACGCGCTCTCGGACCTGGAGCGTTGGGAACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS TCA 72 bp CCCAACGCTCCAGGTCCGAGAGCGCGTCGTTCTTGCTaGGCACCTCGCCCACGTCCAGGGTGTTGCGCTTCT +
Preference number: 6 (lower is better)
Translates to: PNAPGPRARRSC*APRPRPGCCAS
Trigger: AGAAGCGCAACACCCTGGACGTGGGCGAGGTGCTCAGCAAGAACGACGCGCTCTCGGACCTGGAGCGTTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS GCA 72 bp CGCGCTCCAGCCGCTGCAGGTCGCTGTTGTCCAGCGTaGGGTTCTTGCTCTTACTGCGTTCCCAACGCTCCA +
Preference number: 6 (lower is better)
Translates to: RAPAAAGRCCPA*GSCSYCVPNAP
Trigger: TGGAGCGTTGGGAACGCAGTAAGAGCAAGAACCGCACGCTGGACAACAGCGACCTGCAGCGGCTGGAGCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS CAA 90 bp CTCTTACTGCGTTCCCAACGCTCCAGGTCCGAGAGCGCGTCGTTCTaGCTGAGCACCTCGCCCACGTCCAGGGTGTTGCGCTTCTCCGAG +
Preference number: 6 (lower is better)
Translates to: LLLRSQRSRSESASF*LSTSPTSRVLRFSE
Trigger: CTCGGAGAAGCGCAACACCCTGGACGTGGGCGAGGTGCTCAGCAAGAACGACGCGCTCTCGGACCTGGAGCGTTGGGAACGCAGTAAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS GCA 72 bp GGTCGCTGTTGTCCAGCGTGCGGTTCTTGCTCTTACTaGGTTCCCAACGCTCCAGGTCCGAGAGCGCGTCGT +
Preference number: 6 (lower is better)
Translates to: GRCCPACGSCSY*VPNAPGPRARR
Trigger: ACGACGCGCTCTCGGACCTGGAGCGTTGGGAACGCAGTAAGAGCAAGAACCGCACGCTGGACAACAGCGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409538.5
CDS CCA 72 bp TCACGAAGGCATCCATGGGGGCTGGGTGCAGCCCCGTaGCCTGTCTTCTCACAGCAAGGACAAGCAACTGCC +
Preference number: 6 (lower is better)
Translates to: SRRHPWGLGAAP*PVFSQQGQATA
Trigger: GGCAGTTGCTTGTCCTTGCTGTGAGAAGACAGGCCACGGGGCTGCACCCAGCCCCCATGGATGCCTTCGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402604.6
CDS TCA 72 bp AGGGGGAGGACTGACGGGCACGGGCTCCAGCAGGCCTaGGATAAGTGCTGGCTGTCAGTGCAAGGACAAAGA +
Preference number: 6 (lower is better)
Translates to: RGRTDGHGLQQA*DKCWLSVQGQR
Trigger: TCTTTGTCCTTGCACTGACAGCCAGCACTTATCTCAGGCCTGCTGGAGCCCGTGCCCGTCAGTCCTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409457.5
ENST00000619456.4
CDS GCA 72 bp CAGGCTGTCAGGTCCAGATCTGAAGGACGACATTCATaGGTGGGACACATTCCTGTGCCGGACTCCGAATTC +
Preference number: 6 (lower is better)
Translates to: QAVRSRSEGRHS*VGHIPVPDSEF
Trigger: GAATTCGGAGTCCGGCACAGGAATGTGTCCCACGCATGAATGTCGTCCTTCAGATCTGGACCTGACAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453371.2
CDS CCA 72 bp CTGTCAGGTCCAGATCTGAAGGACGACATTCATGCGTaGGACACATTCCTGTGCCGGACTCCGAATTCTCTG +
Preference number: 6 (lower is better)
Translates to: LSGPDLKDDIHA*DTFLCRTPNSL
Trigger: CAGAGAATTCGGAGTCCGGCACAGGAATGTGTCCCACGCATGAATGTCGTCCTTCAGATCTGGACCTGACAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453371.2
CDS CAA 72 bp CTTCCCAACCGTGGCTGTCATTATGATCACTTCCAGTaGCCTAACTGTTGGCAAACGTGTCGGGAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: LPNRGCHYDHFQ*PNCWQTCREPG
Trigger: GCCTGGCTCCCGACACGTTTGCCAACAGTTAGGCAACTGGAAGTGATCATAATGACAGCCACGGTTGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482882.1
CDS GCA 72 bp TTCCCAACCGTGGCTGTCATTATGATCACTTCCAGTTaGCTAACTGTTGGCAAACGTGTCGGGAGCCAGGCA +
Preference number: 6 (lower is better)
Translates to: FPTVAVIMITSS*LTVGKRVGSQA
Trigger: TGCCTGGCTCCCGACACGTTTGCCAACAGTTAGGCAACTGGAAGTGATCATAATGACAGCCACGGTTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482882.1
CDS CAA 90 bp TATCAGGGCCTTCCCAACCGTGGCTGTCATTATGATCACTTCCAGTaGCCTAACTGTTGGCAAACGTGTCGGGAGCCAGGCATCTTCCAA +
Preference number: 6 (lower is better)
Translates to: YQGLPNRGCHYDHFQ*PNCWQTCREPGIFQ
Trigger: TTGGAAGATGCCTGGCTCCCGACACGTTTGCCAACAGTTAGGCAACTGGAAGTGATCATAATGACAGCCACGGTTGGGAAGGCCCTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482882.1
CDS CCA 72 bp GGCTGTCATTATGATCACTTCCAGTTGCCTAACTGTTaGCAAACGTGTCGGGAGCCAGGCATCTTCCAAAGT +
Preference number: 6 (lower is better)
Translates to: GCHYDHFQLPNC*QTCREPGIFQS
Trigger: ACTTTGGAAGATGCCTGGCTCCCGACACGTTTGCCAACAGTTAGGCAACTGGAAGTGATCATAATGACAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482882.1