Pregenerated sensors for AGA (Homo sapiens)
Ensembl gene IDs: ENSG00000038002Ensembl transcript IDs: ENST00000264595.7, ENST00000502310.5, ENST00000506853.5, ENST00000510635.1, ENST00000510955.5, ENST00000511231.1
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GATTTTGAAGGAAAAATGCTGCTGAGAAAGCACGCGCACAACTTCTGTAGAGTTTTCTTGACTTCTAATTaGCATACCCACCTCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: DFEGKMLLRKHAHNFCRVFLTSN*HTHLCT Trigger: TGTGCAGAGGTGGGTATGGCAATTAGAAGTCAAGAA...AACTCTACAGAAGTTGTGCGCGTGCTTTCTCAGCAGCATTTTTCCTTCAAAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| 3UTR-3UTR GCA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGGAAAATCAACACAATTaGTCATCAGAAGATAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LAAKTSLILVALELSHTEENQHN*SSEDSC Trigger: ACAGCTATCTTCTGATGAGCAATTGTGTTGATTTTC...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR CCA 90 bp | GATTTTGAAGGAAAAATGCTGCTGAGAAAGCACGCGCACAACTTCTGTAGAGTTCCAGGGGCAGAGGGCTaGAGCAGCGCACTAGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: DFEGKMLLRKHAHNFCRVPGAEG*SSALGP Trigger: AGGCCCTAGTGCGCTGCTCCAGCCCTCTGCCCCTGG...AACTCTACAGAAGTTGTGCGCGTGCTTTCTCAGCAGCATTTTTCCTTCAAAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR TCA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGCTTCCGCGCCATCCCTaGCCACCGAAGAGACCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LAAKTSLILVALELSHTELPRHP*PPKRPA Trigger: CGCTGGTCTCTTCGGTGGTCAGGGATGGCGCGGAAG...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR GCA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGCCCAGTGGCTGCGGCTaGCCCTGCAGTATCGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: LAAKTSLILVALELSHTEPSGCG*PCSIVS Trigger: GCTGACGATACTGCAGGGGCAGCCGCAGCCACTGGG...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR TCA 90 bp | GATTTTGAAGGAAAAATGCTGCTGAGAAAGCACGCGCACAACTTCTGTAGAGTTAGCTCCAGGTATTGGTaGGTCTCCTACACGGCCATG | + |
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Preference number: 4 (lower is better) Translates to: DFEGKMLLRKHAHNFCRVSSRYW*VSYTAM Trigger: CATGGCCGTGTAGGAGACTCACCAATACCTGGAGCT...AACTCTACAGAAGTTGTGCGCGTGCTTTCTCAGCAGCATTTTTCCTTCAAAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR GCA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGACAGCCGCTCTCCACTaGATCCAGGGCAGAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LAAKTSLILVALELSHTETAALH*IQGRAS Trigger: GGAGGCTCTGCCCTGGATGCAGTGGAGAGCGGCTGT...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR GCA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGGGCTGCGGCTGCCCCTaGAGTATCGTCAGCATAGGC | + |
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Preference number: 4 (lower is better) Translates to: LAAKTSLILVALELSHTEGCGCP*SIVSIG Trigger: GCCTATGCTGACGATACTGCAGGGGCAGCCGCAGCC...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR CCA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGCAGCGCACTAGGGCCTaGCAGAGCAGAAACGGCACG | + |
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Preference number: 4 (lower is better) Translates to: LAAKTSLILVALELSHTEQRTRA*QSRNGT Trigger: CGTGCCGTTTCTGCTCTGCCAGGCCCTAGTGCGCTG...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR GCA 90 bp | GATTTTGAAGGAAAAATGCTGCTGAGAAAGCACGCGCACAACTTCTGTAGAGTTACAGAGCCGTCACACTaGTCTCTCTCACACATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DFEGKMLLRKHAHNFCRVTEPSH*SLSHMA Trigger: TGCCATGTGTGAGAGAGAGCAGTGTGACGGCTCTGT...AACTCTACAGAAGTTGTGCGCGTGCTTTCTCAGCAGCATTTTTCCTTCAAAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR CCA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGTATCACCATTCCCAGTaGCTGCGGCTGCCCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LAAKTSLILVALELSHTEYHHSQ*LRLPLQ Trigger: CTGCAGGGGCAGCCGCAGCCACTGGGAATGGTGATA...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR TCA 90 bp | GATTTTGAAGGAAAAATGCTGCTGAGAAAGCACGCGCACAACTTCTGTAGAGTTGGGTCCGCAGTATTTTaGGGGATCTGGTATAACATT | + |
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Preference number: 4 (lower is better) Translates to: DFEGKMLLRKHAHNFCRVGSAVF*GIWYNI Trigger: AATGTTATACCAGATCCCTCAAAATACTGCGGACCC...AACTCTACAGAAGTTGTGCGCGTGCTTTCTCAGCAGCATTTTTCCTTCAAAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR CCA 90 bp | GATTTTGAAGGAAAAATGCTGCTGAGAAAGCACGCGCACAACTTCTGTAGAGTTTACAGCTTGGTAGCTTaGCAGGAAGCGCATCAATAT | + |
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Preference number: 4 (lower is better) Translates to: DFEGKMLLRKHAHNFCRVYSLVA*QEAHQY Trigger: ATATTGATGCGCTTCCTGCCAAGCTACCAAGCTGTA...AACTCTACAGAAGTTGTGCGCGTGCTTTCTCAGCAGCATTTTTCCTTCAAAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR TCA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGCCGAGCAAGCCAATCTaGATGAAGAGCTTGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: LAAKTSLILVALELSHTEPSKPI*MKSLRS Trigger: GCTTCTCAAGCTCTTCATTCAGATTGGCTTGCTCGG...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR GCA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGCCACGCTGCTTCGGTTaGATTCTTAAAGGGCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: LAAKTSLILVALELSHTEPRCFG*ILKGPS Trigger: ACTTGGCCCTTTAAGAATGCAACCGAAGCAGCGTGG...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR CCA 90 bp | GATTTTGAAGGAAAAATGCTGCTGAGAAAGCACGCGCACAACTTCTGTAGAGTTTACTTTGAGCAAATGTaGTGGCTGACTCTCCTACTA | + |
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Preference number: 4 (lower is better) Translates to: DFEGKMLLRKHAHNFCRVYFEQM*WLTLLL Trigger: TAGTAGGAGAGTCAGCCACCACATTTGCTCAAAGTA...AACTCTACAGAAGTTGTGCGCGTGCTTTCTCAGCAGCATTTTTCCTTCAAAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR TCA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGAAGGAAAAATGCTGCTaGGAAAGCACGCGCACAACT | + |
|
Preference number: 4 (lower is better) Translates to: LAAKTSLILVALELSHTEKEKCC*ESTRTT Trigger: AGTTGTGCGCGTGCTTTCTCAGCAGCATTTTTCCTT...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR CCA 90 bp | GATTTTGAAGGAAAAATGCTGCTGAGAAAGCACGCGCACAACTTCTGTAGAGTTTTTGAGCAAATGTGGTaGCTGACTCTCCTACTAAAA | + |
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Preference number: 4 (lower is better) Translates to: DFEGKMLLRKHAHNFCRVFEQMW*LTLLLK Trigger: TTTTAGTAGGAGAGTCAGCCACCACATTTGCTCAAA...AACTCTACAGAAGTTGTGCGCGTGCTTTCTCAGCAGCATTTTTCCTTCAAAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR TCA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGATAAACCCCATACTTTaGGCAAATGTGGTGGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: LAAKTSLILVALELSHTEINPIL*ANVVAD Trigger: GTCAGCCACCACATTTGCTCAAAGTATGGGGTTTAT...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR TCA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGATGCCAATAGTGTCATaGCCACGATCATCTTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: LAAKTSLILVALELSHTEMPIVS*PRSSSV Trigger: AACAGAAGATGATCGTGGTCATGACACTATTGGCAT...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR GCA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGTCTGAGATCTCCTACTaGTCCTACATCCATAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LAAKTSLILVALELSHTESEISY*SYIHSS Trigger: ACTACTATGGATGTAGGAGCAGTAGGAGATCTCAGA...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR CCA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGATTCCTCCAATAATTTaGCTGGCAATTCCGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LAAKTSLILVALELSHTEIPPII*LAIPSK Trigger: CTTGCTCGGAATTGCCAGCCAAATTATTGGAGGAAT...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR CCA 90 bp | GATTTTGAAGGAAAAATGCTGCTGAGAAAGCACGCGCACAACTTCTGTAGAGTTATATGTCCTGTCTTATaGATTACAACCATGCCAATA | + |
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Preference number: 4 (lower is better) Translates to: DFEGKMLLRKHAHNFCRVICPVL*ITTMPI Trigger: TATTGGCATGGTTGTAATCCATAAGACAGGACATAT...AACTCTACAGAAGTTGTGCGCGTGCTTTCTCAGCAGCATTTTTCCTTCAAAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR CCA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGTTGGCAAGCTATGGTTaGATCTTCTCCTCTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LAAKTSLILVALELSHTELASYG*IFSSSH Trigger: ATGAGAAGAGGAGAAGATCCAACCATAGCTTGCCAA...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR CCA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGCTTTTTGGCAAGCTATaGTTGGATCTTCTCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LAAKTSLILVALELSHTELFGKL*LDLLLF Trigger: GAAGAGGAGAAGATCCAACCATAGCTTGCCAAAAAG...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR GCA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGTGGATAGGAATATCCTaGTTTAAGATACCAGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: LAAKTSLILVALELSHTEWIGIS*FKIPGG Trigger: ACCACCTGGTATCTTAAAGCAGGATATTCCTATCCA...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS TCA 90 bp | AAACGGCACGAGAAGCACAGGCAAGTTCGACTTCCGCGCCATCCCTaGCCACCGAAGAGACCAGCGCGAGAAAAGTCCCGGCAGCCAGCG | + |
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Preference number: 5 (lower is better) Translates to: KRHEKHRQVRLPRHP*PPKRPAREKSRQPA Trigger: CGCTGGCTGCCGGGACTTTTCTCGCGCTGGTCTCTTCGGTGGTCAGGGATGGCGCGGAAGTCGAACTTGCCTGTGCTTCTCGTGCCGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS CCA 90 bp | TTCCTCCAAAGCCTACAGAGCCGTCACACTGCTCTCTCTCACACATaGCACAGCCGCTCTCCACTGCATCCAGGGCAGAGCCTCCAGATG | + |
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Preference number: 5 (lower is better) Translates to: FLQSLQSRHTALSHT*HSRSPLHPGQSLQM Trigger: CATCTGGAGGCTCTGCCCTGGATGCAGTGGAGAGCGGCTGTGCCATGTGTGAGAGAGAGCAGTGTGACGGCTCTGTAGGCTTTGGAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000264595.7 ENST00000506853.5 ENST00000510955.5 ENST00000511231.1 |
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| CDS GCA 90 bp | GTAGCTTGGCAGGAAGCGCATCAATATATCACCATTCCCAGTGGCTaGGGCTGCCCCTGCAGTATCGTCAGCATAGGCTCCAGCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: VAWQEAHQYITIPSG*GCPCSIVSIGSSSR Trigger: CCTGGAGCTGGAGCCTATGCTGACGATACTGCAGGGGCAGCCGCAGCCACTGGGAATGGTGATATATTGATGCGCTTCCTGCCAAGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264595.7 ENST00000502310.5 |
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| CDS GCA 90 bp | CCAAGTTCATCAGGACTTCCTCCAAAGCCTACAGAGCCGTCACACTaGTCTCTCTCACACATGGCACAGCCGCTCTCCACTGCATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PSSSGLPPKPTEPSH*SLSHMAQPLSTASR Trigger: CCTGGATGCAGTGGAGAGCGGCTGTGCCATGTGTGAGAGAGAGCAGTGTGACGGCTCTGTAGGCTTTGGAGGAAGTCCTGATGAACTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000264595.7 ENST00000506853.5 ENST00000510955.5 ENST00000511231.1 |
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| CDS GCA 90 bp | TGGCAGGAAGCGCATCAATATATCACCATTCCCAGTGGCTGCGGCTaGCCCTGCAGTATCGTCAGCATAGGCTCCAGCTCCAGGTATTGG | + |
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Preference number: 5 (lower is better) Translates to: WQEAHQYITIPSGCG*PCSIVSIGSSSRYW Trigger: CCAATACCTGGAGCTGGAGCCTATGCTGACGATACTGCAGGGGCAGCCGCAGCCACTGGGAATGGTGATATATTGATGCGCTTCCTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000264595.7 ENST00000502310.5 ENST00000506853.5 |
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| CDS CCA 90 bp | CTTGGTAGCTTGGCAGGAAGCGCATCAATATATCACCATTCCCAGTaGCTGCGGCTGCCCCTGCAGTATCGTCAGCATAGGCTCCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: LGSLAGSASIYHHSQ*LRLPLQYRQHRLQL Trigger: GAGCTGGAGCCTATGCTGACGATACTGCAGGGGCAGCCGCAGCCACTGGGAATGGTGATATATTGATGCGCTTCCTGCCAAGCTACCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264595.7 ENST00000502310.5 |
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| CDS-3UTR CAA 90 bp | GATTTTGAAGGAAAAATGCTGCTGAGAAAGCACGCGCACAACTTCTGTAGAGTTTTAAAGGGCCAAGTGTaGACGACCAGGGGCAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: DFEGKMLLRKHAHNFCRVLKGQV*TTRGRG Trigger: CCCTCTGCCCCTGGTCGTCAACACTTGGCCCTTTAA...AACTCTACAGAAGTTGTGCGCGTGCTTTCTCAGCAGCATTTTTCCTTCAAAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR CAA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGCTCCAGCTCCAGGTATaGGTGAGTCTCCTACACGGC | + |
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Preference number: 5 (lower is better) Translates to: LAAKTSLILVALELSHTELQLQV*VSLLHG Trigger: GCCGTGTAGGAGACTCACCAATACCTGGAGCTGGAG...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR CAA 90 bp | GATTTTGAAGGAAAAATGCTGCTGAGAAAGCACGCGCACAACTTCTGTAGAGTTCTACAGCTTGGTAGCTaGGCAGGAAGCGCATCAATA | + |
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Preference number: 5 (lower is better) Translates to: DFEGKMLLRKHAHNFCRVLQLGS*AGSASI Trigger: TATTGATGCGCTTCCTGCCAAGCTACCAAGCTGTAG...AACTCTACAGAAGTTGTGCGCGTGCTTTCTCAGCAGCATTTTTCCTTCAAAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR CAA 90 bp | GATTTTGAAGGAAAAATGCTGCTGAGAAAGCACGCGCACAACTTCTGTAGAGTTCATGTATTCTACAGCTaGGTAGCTTGGCAGGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: DFEGKMLLRKHAHNFCRVHVFYS*VAWQEA Trigger: CGCTTCCTGCCAAGCTACCAAGCTGTAGAATACATG...AACTCTACAGAAGTTGTGCGCGTGCTTTCTCAGCAGCATTTTTCCTTCAAAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR CAA 90 bp | GATTTTGAAGGAAAAATGCTGCTGAGAAAGCACGCGCACAACTTCTGTAGAGTTCATTCCTCCAATAATTaGGCTGGCAATTCCGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: DFEGKMLLRKHAHNFCRVHSSNN*AGNSEQ Trigger: TTGCTCGGAATTGCCAGCCAAATTATTGGAGGAATG...AACTCTACAGAAGTTGTGCGCGTGCTTTCTCAGCAGCATTTTTCCTTCAAAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR CAA 90 bp | GATTTTGAAGGAAAAATGCTGCTGAGAAAGCACGCGCACAACTTCTGTAGAGTTTTTGGCAAGCTATGGTaGGATCTTCTCCTCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: DFEGKMLLRKHAHNFCRVFGKLW*DLLLFS Trigger: TGAGAAGAGGAGAAGATCCAACCATAGCTTGCCAAA...AACTCTACAGAAGTTGTGCGCGTGCTTTCTCAGCAGCATTTTTCCTTCAAAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR CAA 90 bp | GATTTTGAAGGAAAAATGCTGCTGAGAAAGCACGCGCACAACTTCTGTAGAGTTCTAAAAGTGTGTGTGTaGTATGTTCCAGTACTTTCC | + |
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Preference number: 5 (lower is better) Translates to: DFEGKMLLRKHAHNFCRVLKVCV*YVPVLS Trigger: GGAAAGTACTGGAACATACAACACACACACTTTTAG...AACTCTACAGAAGTTGTGCGCGTGCTTTCTCAGCAGCATTTTTCCTTCAAAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR CAA 90 bp | GATTTTGAAGGAAAAATGCTGCTGAGAAAGCACGCGCACAACTTCTGTAGAGTTACAACTTCTGTAGAGTaGTCATACAGAGAGTTAATC | + |
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Preference number: 5 (lower is better) Translates to: DFEGKMLLRKHAHNFCRVTTSVE*SYRELI Trigger: GATTAACTCTCTGTATGACAACTCTACAGAAGTTGT...AACTCTACAGAAGTTGTGCGCGTGCTTTCTCAGCAGCATTTTTCCTTCAAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS-3UTR CAA 90 bp | TTAGCAGCTAAAACATCATTGATTCTTGTGGCTTTAGAACTTTCACACACTGAGGCAGCTAAAACATCATaGATTCTTGTGGCTTTAGAA | + |
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Preference number: 5 (lower is better) Translates to: LAAKTSLILVALELSHTEAAKTS*ILVALE Trigger: TTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGC...CTCAGTGTGTGAAAGTTCTAAAGCCACAAGAATCAATGATGTTTTAGCTGCTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS CAA 90 bp | AATGCCCTCCACGCTGCTTCGGTTGCATTCTTAAAGGGCCAAGTGTaGACGACCAGGGGCAGAGGGCTGGAGCAGCGCACTAGGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: NALHAASVAFLKGQV*TTRGRGLEQRTRAW Trigger: CCAGGCCCTAGTGCGCTGCTCCAGCCCTCTGCCCCTGGTCGTCAACACTTGGCCCTTTAAGAATGCAACCGAAGCAGCGTGGAGGGCATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000264595.7 ENST00000506853.5 ENST00000510955.5 ENST00000511231.1 |
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| CDS TCA 72 bp | GAGAAGCACAGGCAAGTTCGACTTCCGCGCCATCCCTaGCCACCGAAGAGACCAGCGCGAGAAAAGTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: EKHRQVRLPRHP*PPKRPAREKSR Trigger: CCGGGACTTTTCTCGCGCTGGTCTCTTCGGTGGTCAGGGATGGCGCGGAAGTCGAACTTGCCTGTGCTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS GCA 72 bp | GCGCATCAATATATCACCATTCCCAGTGGCTGCGGCTaGCCCTGCAGTATCGTCAGCATAGGCTCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: AHQYITIPSGCG*PCSIVSIGSSS Trigger: GGAGCTGGAGCCTATGCTGACGATACTGCAGGGGCAGCCGCAGCCACTGGGAATGGTGATATATTGATGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000264595.7 ENST00000502310.5 ENST00000506853.5 |
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| CDS GCA 72 bp | CAGGAAGCGCATCAATATATCACCATTCCCAGTGGCTaGGGCTGCCCCTGCAGTATCGTCAGCATAGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: QEAHQYITIPSG*GCPCSIVSIGS Trigger: GGAGCCTATGCTGACGATACTGCAGGGGCAGCCGCAGCCACTGGGAATGGTGATATATTGATGCGCTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000264595.7 ENST00000502310.5 ENST00000506853.5 |
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| CDS GCA 72 bp | CAATATATCACCATTCCCAGTGGCTGCGGCTGCCCCTaGAGTATCGTCAGCATAGGCTCCAGCTCCAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: QYITIPSGCGCP*SIVSIGSSSRY Trigger: ATACCTGGAGCTGGAGCCTATGCTGACGATACTGCAGGGGCAGCCGCAGCCACTGGGAATGGTGATATATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000264595.7 ENST00000502310.5 ENST00000506853.5 |
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| CDS CCA 72 bp | TTGGCAGGAAGCGCATCAATATATCACCATTCCCAGTaGCTGCGGCTGCCCCTGCAGTATCGTCAGCATAGG | + |
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Preference number: 6 (lower is better) Translates to: LAGSASIYHHSQ*LRLPLQYRQHR Trigger: CCTATGCTGACGATACTGCAGGGGCAGCCGCAGCCACTGGGAATGGTGATATATTGATGCGCTTCCTGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264595.7 ENST00000502310.5 |
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| CDS CAA 72 bp | CTGCAGTATCGTCAGCATAGGCTCCAGCTCCAGGTATaGGTGAGTCTCCTACACGGCAATAGTGTCATGACC | + |
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Preference number: 6 (lower is better) Translates to: LQYRQHRLQLQV*VSLLHGNSVMT Trigger: GGTCATGACACTATTGCCGTGTAGGAGACTCACCAATACCTGGAGCTGGAGCCTATGCTGACGATACTGCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506853.5 |
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| CDS TCA 72 bp | AGTATCGTCAGCATAGGCTCCAGCTCCAGGTATTGGTaGGTCTCCTACACGGCCATGTATTTTGAATTTTAT | + |
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Preference number: 6 (lower is better) Translates to: SIVSIGSSSRYW*VSYTAMYFEFY Trigger: ATAAAATTCAAAATACATGGCCGTGTAGGAGACTCACCAATACCTGGAGCTGGAGCCTATGCTGACGATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264595.7 |
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| CDS TCA 72 bp | GTGGTAGATAAGTCTTCATTGATAAACCCCATACTTTaGGCAAATGTGGTGGCCATCCATGATCATGGCATC | + |
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Preference number: 6 (lower is better) Translates to: VVDKSSLINPIL*ANVVAIHDHGI Trigger: GATGCCATGATCATGGATGGCCACCACATTTGCTCAAAGTATGGGGTTTATCAATGAAGACTTATCTACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510955.5 |
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| CDS CAA 90 bp | GAAAATGCTTCTGGATTCTTGAAATCACTTTTTGGCAAGCTATGGTaGGATCTTCTCCTCTTCTCATGTATTCTACAGCTTGGTAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: ENASGFLKSLFGKLW*DLLLFSCILQLGSL Trigger: CAAGCTACCAAGCTGTAGAATACATGAGAAGAGGAGAAGATCCAACCATAGCTTGCCAAAAAGTGATTTCAAGAATCCAGAAGCATTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000264595.7 ENST00000502310.5 |
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| CDS TCA 72 bp | GTGGTAGATAAGTCTTCATTGATAAACCCCATACTTTaGGCAAATGTGGTGGCTGACTCTCCTACTAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: VVDKSSLINPIL*ANVVADSPTKS Trigger: ACTTTTAGTAGGAGAGTCAGCCACCACATTTGCTCAAAGTATGGGGTTTATCAATGAAGACTTATCTACCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000264595.7 ENST00000502310.5 ENST00000506853.5 ENST00000510635.1 |
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| CDS GCA 72 bp | ACCAATAGCATTTTTAATTCGTCTGAGATCTCCTACTaGTCCTACATCCATAGTAGTGCCATCCATGATCAT | + |
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Preference number: 6 (lower is better) Translates to: TNSIFNSSEISY*SYIHSSAIHDH Trigger: ATGATCATGGATGGCACTACTATGGATGTAGGAGCAGTAGGAGATCTCAGACGAATTAAAAATGCTATTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000264595.7 ENST00000506853.5 |
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| CDS CAA 72 bp | TCTGGATTCTTGAAATCACTTTTTGGCAAGCTATGGTaGGATCTTCTCCTCTTCTCATGTATTCTACAGCTT | + |
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Preference number: 6 (lower is better) Translates to: SGFLKSLFGKLW*DLLLFSCILQL Trigger: AAGCTGTAGAATACATGAGAAGAGGAGAAGATCCAACCATAGCTTGCCAAAAAGTGATTTCAAGAATCCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000264595.7 ENST00000502310.5 |
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| CDS CAA 90 bp | AGGGAAACTGTGTTTAGAAAGGTCAAGTATAATAAGCTAGGGGTTTaGATCTGTGTCAAAACTCATGCATTCTTTCATCTTGCTCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: RETVFRKVKYNKLGV*ICVKTHAFFHLALR Trigger: TCTGAGAGCAAGATGAAAGAATGCATGAGTTTTGACACAGATCAAAACCCCTAGCTTATTATACTTGACCTTTCTAAACACAGTTTCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511231.1 |
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| CDS TCA 72 bp | AAAAACTGCACAAAAGGCAAATTACCAATAGTGTCATaGCCACGATCATCTTCTGTTTCTTTATGGATAGGA | + |
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Preference number: 6 (lower is better) Translates to: KNCTKGKLPIVS*PRSSSVSLWIG Trigger: TCCTATCCATAAAGAAACAGAAGATGATCGTGGTCATGACACTATTGGTAATTTGCCTTTTGTGCAGTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000510955.5 |
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| CDS GCA 72 bp | TTTGATCTGTGTCAAAACTCATGCATTCTTTCATCTTaGTCTCAGAAGACCACAACTCTAAATGTAACTCAA | + |
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Preference number: 6 (lower is better) Translates to: FDLCQNSCILSS*SQKTTTLNVTQ Trigger: TTGAGTTACATTTAGAGTTGTGGTCTTCTGAGAGCAAGATGAAAGAATGCATGAGTTTTGACACAGATCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511231.1 |
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| CDS CAA 72 bp | GTGTTTAGAAAGGTCAAGTATAATAAGCTAGGGGTTTaGATCTGTGTCAAAACTCATGCATTCTTTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: VFRKVKYNKLGV*ICVKTHAFFHL Trigger: AAGATGAAAGAATGCATGAGTTTTGACACAGATCAAAACCCCTAGCTTATTATACTTGACCTTTCTAAACAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511231.1 |
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