RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AFTPH (Homo sapiens)

Ensembl gene IDs: ENSG00000119844

Ensembl transcript IDs: ENST00000238855.11, ENST00000238856.8, ENST00000409183.5, ENST00000409933.5, ENST00000422803.2, ENST00000487769.2, ENST00000498706.5

Found 311 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGCCGTCTGCTTTTTCTTaGGAGCTTGTGGAAGGTGTT +
Preference number: 2 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLPSAFS*ELVEGV
Trigger: AACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGG...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422803.2
3UTR-3UTR CCA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGATTTCTTGAGAGCTTGTaGAAGGTGTTAACGTGGCTG +
Preference number: 2 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRFLESL*KVLTWL
Trigger: CAGCCACGTTAACACCTTCCACAAGCTCTCAAGAAA...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422803.2
3UTR-3UTR TCA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAAACAAAAGCCAGATCTaGAACCCATCATACACAAAA +
Preference number: 2 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRNKSQI*NPSYTK
Trigger: TTTTGTGTATGATGGGTTTCAGATCTGGCTTTTGTT...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
3UTR-3UTR TCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTAACAAAAGCCAGATCTaGAACCCATCATACACAAAA +
Preference number: 2 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSNKSQI*NPSYTK
Trigger: TTTTGTGTATGATGGGTTTCAGATCTGGCTTTTGTT...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
3UTR TCA 72 bp TGTCCAATTCACATCAGTTATCCGTCTGCTTTTTCTTaGGAGCTTGTGGAAGGTGTTAACGTGGCTGGGAAC +
Preference number: 3 (lower is better)
Translates to: CPIHISYPSAFS*ELVEGVNVAGN
Trigger: GTTCCCAGCCACGTTAACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAATTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422803.2
3UTR-3UTR CAA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGAGAGCAGGTATGCTTTaGATGGTAGGGAAGGGATGG +
Preference number: 3 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLRAGML*MVGKGW
Trigger: CCATCCCTTCCCTACCATCAAAAGCATACCTGCTCT...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
3UTR-3UTR CAA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTCTTTTTCTTGAGAGCTaGTGGAAGGTGTTAACGTGG +
Preference number: 3 (lower is better)
Translates to: DSQCNLKRLKGISQTVKILFLES*WKVLTW
Trigger: CCACGTTAACACCTTCCACAAGCTCTCAAGAAAAAG...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422803.2
3UTR-3UTR CAA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGAGAGCAGGTATGCTTTaGATGGTAGGGAAGGGATGG +
Preference number: 3 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLRAGML*MVGKGW
Trigger: CCATCCCTTCCCTACCATCAAAAGCATACCTGCTCT...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
3UTR-3UTR CAA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTATTAAATGGGGGACTTaGGAGCTTATTTATGATAGC +
Preference number: 3 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCIKWGT*ELIYDS
Trigger: GCTATCATAAATAAGCTCCAAAGTCCCCCATTTAAT...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
3UTR-3UTR CAA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTATTAAATGGGGGACTTaGGAGCTTATTTATGATAGC +
Preference number: 3 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSIKWGT*ELIYDS
Trigger: GCTATCATAAATAAGCTCCAAAGTCCCCCATTTAAT...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTCGGGGCGGCTGCGATaGGCATGGCTCAGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: DSQCNLKRLKGISQTVKISGRLR*AWLRGP
Trigger: CGGGCCCCTGAGCCATGCCCATCGCAGCCGCCCCGA...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAACCGACGCGGAACTGGTaGGAGCGGAAGGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQPTRNW*ERKAGC
Trigger: GCAGCCGGCCTTCCGCTCTCACCAGTTCCGCGTCGG...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGCCGACGCGGAACTGGTaGGAGCGGAAGGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLPTRNW*ERKAGC
Trigger: GCAGCCGGCCTTCCGCTCTCACCAGTTCCGCGTCGG...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTGAGCGGAAGGCCGGCTaGTCACAGCCCTGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSERKAG*SQPCQR
Trigger: GCGCTGACAGGGCTGTGAGCAGCCGGCCTTCCGCTC...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGGAGCGGAAGGCCGGCTaGTCACAGCCCTGTCAGCGC +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLERKAG*SQPCQR
Trigger: GCGCTGACAGGGCTGTGAGCAGCCGGCCTTCCGCTC...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGATCGGGGCGGCTGCGATaGGCATGGCTCAGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRSGRLR*AWLRGP
Trigger: CGGGCCCCTGAGCCATGCCCATCGCAGCCGCCCCGA...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTCACACTCTCCCATCATaGAGCGGGGGAACCGCTGCC +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSHTLPS*SGGTAA
Trigger: GGCAGCGGTTCCCCCGCTGCATGATGGGAGAGTGTG...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGCACACTCTCCCATCATaGAGCGGGGGAACCGCTGCC +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLHTLPS*SGGTAA
Trigger: GGCAGCGGTTCCCCCGCTGCATGATGGGAGAGTGTG...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGAGCGCAGCAGCACCATaGACGCCCACCCGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLSAAAP*TPTRSF
Trigger: GAAACTCCGGGTGGGCGTCCATGGTGCTGCTGCGCT...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp CGGTTTCCTACTGGTAGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCGGCTCTAACATACCCTaGACTGAAGTGGCTGATTCC +
Preference number: 4 (lower is better)
Translates to: RFPTGRCACLLYCRHESCGSNIP*TEVADS
Trigger: GGAATCAGCCACTTCAGTTCAGGGTATGTTAGAGCC...GCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCTACCAGTAGGAAACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR CCA 90 bp GACATGAGTCTTGCAAATGCATCAGTCACTTTGAGGCTTGAGGTGGAGATTTCCGATTCAGTAGCCTGCTaGTCTCCAAAAGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: DMSLANASVTLRLEVEISDSVAC*SPKAAQ
Trigger: TTGGGCTGCTTTTGGAGACCAGCAGGCTACTGAATC...GGAAATCTCCACCTCAAGCCTCAAAGTGACTGATGCATTTGCAAGACTCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR CCA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGGGAGCCGCCCCACTaGTATCTCAAGCCATGTGCA +
Preference number: 4 (lower is better)
Translates to: DSQCNLKRLKGISQTVKIWEPPH*YLKPCA
Trigger: TGCACATGGCTTGAGATACCAGTGGGGCGGCTCCCA...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAATGGGAGCCGCCCCACTaGTATCTCAAGCCATGTGCA +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQWEPPH*YLKPCA
Trigger: TGCACATGGCTTGAGATACCAGTGGGGCGGCTCCCA...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp GACATGAGTCTTGCAAATGCATCAGTCACTTTGAGGCTTGAGGTGGAGATTTCCTCATATCTGGTGACATaGTGGCTGTCTGACCGATGG +
Preference number: 4 (lower is better)
Translates to: DMSLANASVTLRLEVEISSYLVT*WLSDRW
Trigger: CCATCGGTCAGACAGCCACCATGTCACCAGATATGA...GGAAATCTCCACCTCAAGCCTCAAAGTGACTGATGCATTTGCAAGACTCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR TCA 90 bp CGGTTTCCTACTGGTAGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAGTCACTTTGAGGCTTaGGGTGGAGATTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: RFPTGRCACLLYCRHESCSHFEA*GGDFQL
Trigger: AAGCTGGAAATCTCCACCTCAAGCCTCAAAGTGACT...GCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCTACCAGTAGGAAACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR CCA 90 bp GGTTTCCTACTGGTAGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCATATCTGGTGACATGGTaGCTGTCTGACCGATGGAAG +
Preference number: 4 (lower is better)
Translates to: GFLLVDVLVFSTVDMSLAYLVTW*LSDRWK
Trigger: CTTCCATCGGTCAGACAGCCACCATGTCACCAGATA...TGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCTACCAGTAGGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR CCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCCGGATCCACACCTaGGATTGTGGTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCLRIHT*DCGAAA
Trigger: AGCAGCAGCACCACAATCCCAGGTGTGGATCCGGAG...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238855.11
CDS-3UTR TCA 90 bp GGTTTCCTACTGGTAGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCATTGGCTAGGACCAGCTaGACTGAAGTCTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: GFLLVDVLVFSTVDMSLALARTS*TEVCKI
Trigger: GATTTTGCAGACTTCAGTTCAGCTGGTCCTAGCCAA...TGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCTACCAGTAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR TCA 90 bp AGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCATCAGTCACTGTGTTCATATCTGGTaGCATGGTGGCTGTCTGACC +
Preference number: 4 (lower is better)
Translates to: RCACLLYCRHESCKCISHCVHIW*HGGCLT
Trigger: GGTCAGACAGCCACCATGTCACCAGATATGAACACA...GTGACTGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR TCA 90 bp GACATGAGTCTTGCAAATGCATCAGTCACTTTGAGGCTTGAGGTGGAGATTTCCATCCACACCTGGAACTaGTCAGATGTACATGTGTTC +
Preference number: 4 (lower is better)
Translates to: DMSLANASVTLRLEVEISIHTWN*SDVHVF
Trigger: GAACACATGTACATCTGATCAGTTCCAGGTGTGGAT...GGAAATCTCCACCTCAAGCCTCAAAGTGACTGATGCATTTGCAAGACTCATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR CCA 90 bp CGGTTTCCTACTGGTAGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCTTCCAATCTACAACTTaGCTAGGACCAGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: RFPTGRCACLLYCRHESCFQSTT*LGPAEL
Trigger: CAGTTCAGCTGGTCCTAGCCAAGTTGTAGATTGGAA...GCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCTACCAGTAGGAAACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR CCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGAGCTTCTTGTTGCTATaGGAGCCGCCCCACTGGTAT +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLSFLLL*EPPHWY
Trigger: ATACCAGTGGGGCGGCTCCCATAGCAACAAGAAGCT...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTCTACTCCAGTCAAACTaGACGGGTGGTAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: DSQCNLKRLKGISQTVKILLQSN*TGGRDS
Trigger: GGAGTCTCTACCACCCGTCCAGTTTGACTGGAGTAG...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp GGTTTCCTACTGGTAGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCATCAGTGGTTCCTTGGTaGGCTCTAACATACCCTGAA +
Preference number: 4 (lower is better)
Translates to: GFLLVDVLVFSTVDMSLASVVPW*ALTYPE
Trigger: TTCAGGGTATGTTAGAGCCCACCAAGGAACCACTGA...TGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCTACCAGTAGGAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR CCA 90 bp CCTACTGGTAGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCGTTTCAGTGGTTCCTTaGTGGGCTCTAACATACCCT +
Preference number: 4 (lower is better)
Translates to: PTGRCACLLYCRHESCKCVSVVP*WALTYP
Trigger: AGGGTATGTTAGAGCCCACCAAGGAACCACTGAAAC...GCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCTACCAGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR TCA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTAGGCTTCCGTCCCTTTaGATCAGCTACATTGTCCAG +
Preference number: 4 (lower is better)
Translates to: DSQCNLKRLKGISQTVKIRLPSL*ISYIVQ
Trigger: CTGGACAATGTAGCTGATTCAAAGGGACGGAAGCCT...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTTCATCTGTCCTATGTaGCTGCCAGGCTTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: DSQCNLKRLKGISQTVKIFICPM*LPGFLS
Trigger: CGAAAGGAAGCCTGGCAGTCACATAGGACAGATGAA...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp TGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCATCAGTCACTTTTTCATCTGTCCTATGTaGCTGCCAGGCTTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: CACLLYCRHESCKCISHFFICPM*LPGFLS
Trigger: CGAAAGGAAGCCTGGCAGTCACATAGGACAGATGAA...AAAGTGACTGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR TCA 90 bp ACTGTCCAATTCACATCAGTTATCCGTCTGCTTTTTCTTGAGAGCTTGTGGAAGGACATGGTGGCTGTCTaGCCGATGGAAGCTATTTTT +
Preference number: 4 (lower is better)
Translates to: TVQFTSVIRLLFLESLWKDMVAV*PMEAIF
Trigger: AAAAATAGCTTCCATCGGTCAGACAGCCACCATGTC...CTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAATTGGACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422803.2
CDS-3UTR TCA 90 bp AGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCATCAGTCACGACATGGTGGCTGTCTaGCCGATGGAAGCTATTTTT +
Preference number: 4 (lower is better)
Translates to: RCACLLYCRHESCKCISHDMVAV*PMEAIF
Trigger: AAAAATAGCTTCCATCGGTCAGACAGCCACCATGTC...GTGACTGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR TCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGTGTGTTCATATCTGGTaGCATGGTGGCTGTCTGACC +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLCVHIW*HGGCLT
Trigger: GGTCAGACAGCCACCATGTCACCAGATATGAACACA...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp ACTGTCCAATTCACATCAGTTATCCGTCTGCTTTTTCTTGAGAGCTTGTGGAAGGGCACTATAACAGGCTaGTTCTTATTGCCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: TVQFTSVIRLLFLESLWKGTITG*FLLPVK
Trigger: CTTCACGGGCAATAAGAAGCAGCCTGTTATAGTGCC...CTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAATTGGACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422803.2
CDS-3UTR CCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTGTGGAGTTGAGCCACTaGCAGAGCCAAAGTCACCAA +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCVELSH*QSQSHQ
Trigger: TTGGTGACTTTGGCTCTGCCAGTGGCTCAACTCCAC...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp CTACTGGTAGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCAGTACACTGTGCGTTTTaGGGGTTCCTGGAGTATCAA +
Preference number: 4 (lower is better)
Translates to: LLVDVLVFSTVDMSLANAVHCAF*GFLEYQ
Trigger: TTGATACTCCAGGAACCCCCAAAACGCACAGTGTAC...TGCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCTACCAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR CCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTAGCTTCTTGTTGCTATaGGAGCCGCCCCACTGGTAT +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCSFLLL*EPPHWY
Trigger: ATACCAGTGGGGCGGCTCCCATAGCAACAAGAAGCT...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp CCTACTGGTAGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCCCATTGCAGTCATCCTaGATATTTGGCACAGAATCA +
Preference number: 4 (lower is better)
Translates to: PTGRCACLLYCRHESCKCPLQSS*IFGTES
Trigger: TGATTCTGTGCCAAATATTCAGGATGACTGCAATGG...GCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCTACCAGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR TCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGTTGGCTAGGACCAGCTaGACTGAAGTCTGCAAAATC +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLLARTS*TEVCKI
Trigger: GATTTTGCAGACTTCAGTTCAGCTGGTCCTAGCCAA...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp AGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCATCAGTCACTCCTTTGGAAGTTGCTaGAGGTACACTGTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: RCACLLYCRHESCKCISHSFGSC*RYTVRF
Trigger: AAAACGCACAGTGTACCTTCAGCAACTTCCAAAGGA...GTGACTGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR TCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAAGCTTCTTATTGCCCGTaGAGAGAATGTTTCGGGTGT +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQASYCP*RECFGC
Trigger: ACACCCGAAACATTCTCTTCACGGGCAATAAGAAGC...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR TCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTTGTGTTCATATCTGGTaGCATGGTGGCTGTCTGACC +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCCVHIW*HGGCLT
Trigger: GGTCAGACAGCCACCATGTCACCAGATATGAACACA...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR TCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAAAGTCACTTTGAGGCTTaGGGTGGAGATTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQSHFEA*GGDFQL
Trigger: AAGCTGGAAATCTCCACCTCAAGCCTCAAAGTGACT...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR TCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTACACCTTGGCATGCATaGATGTTAAGTCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSTPWHA*MLSQEG
Trigger: GCCTTCCTGACTTAACATTCATGCATGCCAAGGTGT...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR TCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTCCGTCTGCTTTTTCTTaGGAGCTTGTGGAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSPSAFS*ELVEGV
Trigger: AACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGG...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAAGGCACTATAACAGGCTaGTTCTTATTGCCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQGTITG*FLLPVK
Trigger: CTTCACGGGCAATAAGAAGCAGCCTGTTATAGTGCC...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGGTACACTGTGCGTTTTaGGGGTTCCTGGAGTATCAA +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLVHCAF*GFLEYQ
Trigger: TTGATACTCCAGGAACCCCCAAAACGCACAGTGTAC...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGGTTTCAGTGGTTCCTTaGTGGGCTCTAACATACCCA +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLVSVVP*WALTYP
Trigger: TGGGTATGTTAGAGCCCACCAAGGAACCACTGAAAC...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp CTGGTAGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCATCATTCTGCAGCAGAAAGTaGTTTCAGTGGTTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LVDVLVFSTVDMSLANASFCSRK*FQWFLG
Trigger: ACCAAGGAACCACTGAAACCACTTTCTGCTGCAGAA...TGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCTACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR CCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTTATCTGGTGACATGGTaGCTGTCTGACCGATGGAAG +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCYLVTW*LSDRWK
Trigger: CTTCCATCGGTCAGACAGCCACCATGTCACCAGATA...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTTCATATCTGGTGACATaGTGGCTGTCTGACCGATGG +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCSYLVT*WLSDRW
Trigger: CCATCGGTCAGACAGCCACCATGTCACCAGATATGA...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTTGGAAGGTGTTAACGTaGCTGGGAACATCACACCTT +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSWKVLT*LGTSHL
Trigger: AAGGTGTGATGTTCCCAGCCACGTTAACACCTTCCA...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422803.2
3UTR CAA 72 bp ACTGTAGACATGAGTCTTGCAAATGCATCAGTCACTTaGAGGCTTGAGGTGGAGATTTCCAGCTTAGAAGTT +
Preference number: 4 (lower is better)
Translates to: TVDMSLANASVT*RLEVEISSLEV
Trigger: AACTTCTAAGCTGGAAATCTCCACCTCAAGCCTCAAAGTGACTGATGCATTTGCAAGACTCATGTCTACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR TCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGTTATACTCAGTGCTATaGGTGCTAAGAGGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLLYSVL*VLRGFR
Trigger: ACGGAAGCCTCTTAGCACTCATAGCACTGAGTATAA...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAATTATACTCAGTGCTATaGGTGCTAAGAGGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQLYSVL*VLRGFR
Trigger: ACGGAAGCCTCTTAGCACTCATAGCACTGAGTATAA...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTTCTGAAACACAAACCTaGTCCTCTCCATCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSSETQT*SSPSVS
Trigger: AGACACTGATGGAGAGGATCAGGTTTGTGTTTCAGA...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTATGTGGAAAGTGCTCTaGAGACTCTTCAAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: DSQCNLKRLKGISQTVKIMWKVL*RLFKSG
Trigger: GCCACTTTTGAAGAGTCTTCAGAGCACTTTCCACAT...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGTCCTTTGGAAGTTGCTaGAGGTACACTGTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLSFGSC*RYTVRF
Trigger: AAAACGCACAGTGTACCTTCAGCAACTTCCAAAGGA...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTAGAGACTCCTGGAACTaGTCAGATGTACATGTGTTC +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSRDSWN*SDVHVF
Trigger: GAACACATGTACATCTGATCAGTTCCAGGAGTCTCT...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR TCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGAGAGACTCCTGGAACTaGTCAGATGTACATGTGTTC +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLRDSWN*SDVHVF
Trigger: GAACACATGTACATCTGATCAGTTCCAGGAGTCTCT...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR TCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTAGTCACTTTGAGGCTTaGGGTGGAGATTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCSHFEA*GGDFQL
Trigger: AAGCTGGAAATCTCCACCTCAAGCCTCAAAGTGACT...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR TCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGATGCATCAGTCACTTTaGGGCTTGAGGTGGAGATTT +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLMHQSL*GLRWRF
Trigger: AAATCTCCACCTCAAGCCTCAAAGTGACTGATGCAT...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR TCA 90 bp TTTCCTACTGGTAGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAAATGCATCAGTCACTTTaGGGCTTGAGGTGGAGATTT +
Preference number: 4 (lower is better)
Translates to: FPTGRCACLLYCRHESCKMHQSL*GLRWRF
Trigger: AAATCTCCACCTCAAGCCTCAAAGTGACTGATGCAT...TTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCTACCAGTAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR TCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCCGTCTGCTTTTTCTTaGGAGCTTGTGGAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCPSAFS*ELVEGV
Trigger: AACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGG...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTCATACCCAATCCTGCTaGATACATGGGCACTATAAC +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSHTQSC*IHGHYN
Trigger: GTTATAGTGCCCATGTATGCAGCAGGATTGGGTATG...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGCATACCCAATCCTGCTaGATACATGGGCACTATAAC +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLHTQSC*IHGHYN
Trigger: GTTATAGTGCCCATGTATGCAGCAGGATTGGGTATG...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp CTGGTAGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCATCACATGAGTCTTGCAAATaGATCAGTCACTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LVDVLVFSTVDMSLANASHESCK*ISHFEA
Trigger: AGCCTCAAAGTGACTGATGCATTTGCAAGACTCATG...TGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCTACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR CCA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGGTGGAGTTGAGCCACTaGCAGAGCCAAAGTCACCAA +
Preference number: 4 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLVELSH*QSQSHQ
Trigger: TTGGTGACTTTGGCTCTGCCAGTGGCTCAACTCCAC...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTTCCAATCTACAACTTaGCTAGGACCAGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: DSQCNLKRLKGISQTVKIFQSTT*LGPAEL
Trigger: CAGTTCAGCTGGTCCTAGCCAAGTTGTAGATTGGAA...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTTTCCAATCTACAACTTaGCTAGGACCAGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSFQSTT*LGPAEL
Trigger: CAGTTCAGCTGGTCCTAGCCAAGTTGTAGATTGGAA...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTGTACACTGTGCGTTTTaGGGGTTCCTGGAGTATCAA +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCVHCAF*GFLEYQ
Trigger: TTGATACTCCAGGAACCCCCAAAACGCACAGTGTAC...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAACTGTCTGAACTGAAGTaGCTGATTCCTGTAAATGGC +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQLSELK*LIPVNG
Trigger: GCCATTTACAGGAATCAGCCACTTCAGTTCAGACAG...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGAAGCCATGTGCATCATaGATATCCTGTAGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLKPCAS*ISCSSV
Trigger: GACTGAGCTACAGGATATCCATGATGCACATGGCTT...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTTTCTGCAGCAGAAAGTaGTTTCAGTGGTTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSFCSRK*FQWFLG
Trigger: ACCAAGGAACCACTGAAACCACTTTCTGCTGCAGAA...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGACTACTCCAGTCAAACTaGACGGGTGGTAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRLLQSN*TGGRDS
Trigger: GGAGTCTCTACCACCCGTCCAGTTTGACTGGAGTAG...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTCTACTCCAGTCAAACTaGACGGGTGGTAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSLLQSN*TGGRDS
Trigger: GGAGTCTCTACCACCCGTCCAGTTTGACTGGAGTAG...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAATTTCTTGAGAGCTTGTaGAAGGTGTTAACGTGGCTG +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQFLESL*KVLTWL
Trigger: CAGCCACGTTAACACCTTCCACAAGCTCTCAAGAAA...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp TTTCCTACTGGTAGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAATACCCTGAACTGAAGTaGCTGATTCCTGTAAATGGC +
Preference number: 4 (lower is better)
Translates to: FPTGRCACLLYCRHESCKYPELK*LIPVNG
Trigger: GCCATTTACAGGAATCAGCCACTTCAGTTCAGGGTA...TTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCTACCAGTAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR TCA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTAAGAGTACATTCGAATaGTGTCTGGCTCCATTGTTC +
Preference number: 4 (lower is better)
Translates to: DSQCNLKRLKGISQTVKIKSTFE*CLAPLF
Trigger: GAACAATGGAGCCAGACATCATTCGAATGTACTCTT...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAAGGCTTCCGTCCCTTTaGATCAGCTACATTGTCCAG +
Preference number: 4 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRRLPSL*ISYIVQ
Trigger: CTGGACAATGTAGCTGATTCAAAGGGACGGAAGCCT...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAACTCCAAGCCTTTGACTaGACACCTGACTGTAAAAAT +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQLQAFD*TPDCKN
Trigger: ATTTTTACAGTCAGGTGTTCAGTCAAAGGCTTGGAG...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTCTCCAAGCCTTTGACTaGACACCTGACTGTAAAAAT +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSLQAFD*TPDCKN
Trigger: ATTTTTACAGTCAGGTGTTCAGTCAAAGGCTTGGAG...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTAACAAAAGGTGGAGTTaGGCCACTGGCAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSNKRWS*ATGRAK
Trigger: TTTGGCTCTGCCAGTGGCTCAACTCCACCTTTTGTT...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAACCATTGCAGTCATCCTaGATATTTGGCACAGAATCA +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQPLQSS*IFGTES
Trigger: TGATTCTGTGCCAAATATTCAGGATGACTGCAATGG...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTCCATTGCAGTCATCCTaGATATTTGGCACAGAATCA +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSPLQSS*IFGTES
Trigger: TGATTCTGTGCCAAATATTCAGGATGACTGCAATGG...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp GTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCATCAGTCACTTTGAAATCATCAGAGTCTTaGAAACCATTGCAGTCATCC +
Preference number: 4 (lower is better)
Translates to: VLVFSTVDMSLANASVTLKSSES*KPLQSS
Trigger: GGATGACTGCAATGGTTTTCAAGACTCTGATGATTT...CAAAGTGACTGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR TCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTTTCATCTGTCCTATGTaGCTGCCAGGCTTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSFICPM*LPGFLS
Trigger: CGAAAGGAAGCCTGGCAGTCACATAGGACAGATGAA...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTTGTGTTCATATCTGGTaGCATGGTGGCTGTCTGACC +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSCVHIW*HGGCLT
Trigger: GGTCAGACAGCCACCATGTCACCAGATATGAACACA...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR TCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTATGCATCAGTCACTTTaGGGCTTGAGGTGGAGATTT +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCMHQSL*GLRWRF
Trigger: AAATCTCCACCTCAAGCCTCAAAGTGACTGATGCAT...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACAAAAGCTTCTTGTTaGTATGGGAGCCGCCCCACT +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSTKASC*YGSRPT
Trigger: AGTGGGGCGGCTCCCATAGCAACAAGAAGCTTTTGT...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGCATGAGTCTTGCAAATaGATCAGTCACTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLHESCK*ISHFEA
Trigger: AGCCTCAAAGTGACTGATGCATTTGCAAGACTCATG...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTCATGAGTCTTGCAAATaGATCAGTCACTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSHESCK*ISHFEA
Trigger: AGCCTCAAAGTGACTGATGCATTTGCAAGACTCATG...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAAGCTTCTTCACTTAGGTaGTCTTCTCTTTTCGGTTTC +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQASSLR*SSLFGF
Trigger: GAAACCGAAAAGAGAAGAGCACCTAAGTGAAGAAGC...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTGCTTCTTCACTTAGGTaGTCTTCTCTTTTCGGTTTC +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSASSLR*SSLFGF
Trigger: GAAACCGAAAAGAGAAGAGCACCTAAGTGAAGAAGC...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGATTCAGTAGCCTGCTaGTCTCCAAAAGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRDSVAC*SPKAAQ
Trigger: TTGGGCTGCTTTTGGAGACCAGCAGGCTACTGAATC...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGGATTCAGTAGCCTGCTaGTCTCCAAAAGCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLDSVAC*SPKAAQ
Trigger: TTGGGCTGCTTTTGGAGACCAGCAGGCTACTGAATC...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTCATCAGGGACAAGTATaGAAGGAAAACATGCTTCGA +
Preference number: 4 (lower is better)
Translates to: DSQCNLKRLKGISQTVKIHQGQV*KENMLR
Trigger: TCGAAGCATGTTTTCCTTCCATACTTGTCCCTGATG...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTAAGCCATGTGCATCATaGATATCCTGTAGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCKPCAS*ISCSSV
Trigger: GACTGAGCTACAGGATATCCATGATGCACATGGCTT...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTTTCTGCAGCAGAAAGTaGTTTCAGTGGTTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCFCSRK*FQWFLG
Trigger: ACCAAGGAACCACTGAAACCACTTTCTGCTGCAGAA...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTTATCTGGTGACATGGTaGCTGTCTGACCGATGGAAG +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSYLVTW*LSDRWK
Trigger: CTTCCATCGGTCAGACAGCCACCATGTCACCAGATA...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTTCATATCTGGTGACATaGTGGCTGTCTGACCGATGG +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSSYLVT*WLSDRW
Trigger: CCATCGGTCAGACAGCCACCATGTCACCAGATATGA...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR TCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAACAGAAAGTTCAGCAGTaGTGTCCTTATCATTACCAT +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQQKVQQ*CPYHYH
Trigger: ATGGTAATGATAAGGACATCACTGCTGAACTTTCTG...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGGAATCCATGCATAGGTaGGCACATTTAGAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLESMHR*AHLEVS
Trigger: ACTTACTTCTAAATGTGCTCACCTATGCATGGATTC...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTGAATCCATGCATAGGTaGGCACATTTAGAAGTAAGT +
Preference number: 4 (lower is better)
Translates to: DSQCNLKRLKGISQTVKIESMHR*AHLEVS
Trigger: ACTTACTTCTAAATGTGCTCACCTATGCATGGATTC...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAAAAATCATCAGAGTCTTaGAAACCATTGCAGTCATCC +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQKSSES*KPLQSS
Trigger: GGATGACTGCAATGGTTTTCAAGACTCTGATGATTT...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTAAATCATCAGAGTCTTaGAAACCATTGCAGTCATCC +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSKSSES*KPLQSS
Trigger: GGATGACTGCAATGGTTTTCAAGACTCTGATGATTT...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGGCTTCTTATTGCCCGTaGAGAGAATGTTTCGGGTGT +
Preference number: 4 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLASYCP*RECFGC
Trigger: ACACCCGAAACATTCTCTTCACGGGCAATAAGAAGC...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR TCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTGACATGGTGGCTGTCTaGCCGATGGAAGCTATTTTT +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSDMVAV*PMEAIF
Trigger: AAAAATAGCTTCCATCGGTCAGACAGCCACCATGTC...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR TCA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGAGTCACTTTGAGGCTTaGGGTGGAGATTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLSHFEA*GGDFQL
Trigger: AAGCTGGAAATCTCCACCTCAAGCCTCAAAGTGACT...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR TCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACACCTTGGCATGCATaGATGTTAAGTCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSTPWHA*MLSQEG
Trigger: GCCTTCCTGACTTAACATTCATGCATGCCAAGGTGT...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR TCA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGACCGTCTGCTTTTTCTTaGGAGCTTGTGGAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRPSAFS*ELVEGV
Trigger: AACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGG...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTAAATGTGGCAAAATCTaGAAATTCCTCAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSKCGKI*KFLSRT
Trigger: AGTCCTGCTGAGGAATTTGCAGATTTTGCCACATTT...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTGGCACTATAACAGGCTaGTTCTTATTGCCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSGTITG*FLLPVK
Trigger: CTTCACGGGCAATAAGAAGCAGCCTGTTATAGTGCC...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp ACTGTCCAATTCACATCAGTTATCCGTCTGCTTTTTCTTGAGAGCTTGTGGAAGTGTAGACATGAGTCTTaGAAATGCATCAGTCACTTT +
Preference number: 4 (lower is better)
Translates to: TVQFTSVIRLLFLESLWKCRHES*KCISHF
Trigger: AAAGTGACTGATGCATTTGCAAGACTCATGTCTACA...CTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAATTGGACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422803.2
CDS-3UTR GCA 90 bp GATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCATCAGTCACTTGTAGACATGAGTCTTaGAAATGCATCAGTCACTTT +
Preference number: 4 (lower is better)
Translates to: DVLVFSTVDMSLANASVTCRHES*KCISHF
Trigger: AAAGTGACTGATGCATTTGCAAGACTCATGTCTACA...AGTGACTGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR GCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGATCAACACCTTGGCATaGATGAATGTTAAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLINTLA*MNVKSG
Trigger: TCCTGACTTAACATTCATGCATGCCAAGGTGTTGAT...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTATCAACACCTTGGCATaGATGAATGTTAAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: DSQCNLKRLKGISQTVKIINTLA*MNVKSG
Trigger: TCCTGACTTAACATTCATGCATGCCAAGGTGTTGAT...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGCATCAGTTATCCGTCTaGTTTTTCTTGAGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLHQLSV*FFLRAC
Trigger: ACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATG...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTAAAAGACCTTGGGCATaGACATTAACCTTGTTAGAG +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSKRPWA*TLTLLE
Trigger: CTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGAAAAGACCTTGGGCATaGACATTAACCTTGTTAGAG +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLKRPWA*TLTLLE
Trigger: CTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCATTCGAATGATGTCTaGCTCCATTGTTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCHSNDV*LHCSVA
Trigger: AGCAACTGAACAATGGAGCCAGACATCATTCGAATG...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTGTACAAACTCTTCCTTaGGACGAGTATAATCTGGTG +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCVQTLP*DEYNLV
Trigger: CACCAGATTATACTCGTCCCAAGGAAGAGTTTGTAC...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp AGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCATCAGTCACTCCAAAGTCATCACCTaGTTCACTAAAATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: RCACLLYCRHESCKCISHSKVIT*FTKMWK
Trigger: TTTCCACATTTTAGTGAACCAGGTGATGACTTTGGA...GTGACTGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR CCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGCTCTCTCGTTTTTATTaGCAAAGTGCTTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLLSRFY*QSACFQ
Trigger: CTGGAAACAAGCACTTTGCCAATAAAAACGAGAGAG...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTTCAGTGGTTCCTTGGTaGGCTCTAACATACCCAATC +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSSVVPW*ALTYPI
Trigger: GATTGGGTATGTTAGAGCCCACCAAGGAACCACTGA...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGATCAGTGGTTCCTTGGTaGGCTCTAACATACCCAATC +
Preference number: 4 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRSVVPW*ALTYPI
Trigger: GATTGGGTATGTTAGAGCCCACCAAGGAACCACTGA...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGTTTCAGTGGTTCCTTaGTGGGCTCTAACATACCCA +
Preference number: 4 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRVSVVP*WALTYP
Trigger: TGGGTATGTTAGAGCCCACCAAGGAACCACTGAAAC...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGTGGAAGGTGTTAACGTaGCTGGGAACATCAACACCT +
Preference number: 4 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLWKVLT*LGTSTP
Trigger: AGGTGTTGATGTTCCCAGCCACGTTAACACCTTCCA...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGATGGAAGGTGTTAACGTaGCTGGGAACATCAACACCT +
Preference number: 4 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRWKVLT*LGTSTP
Trigger: AGGTGTTGATGTTCCCAGCCACGTTAACACCTTCCA...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp ACTGTCCAATTCACATCAGTTATCCGTCTGCTTTTTCTTGAGAGCTTGTGGAAGAATTTCAAAAGACCTTaGGCATGCACATTAACCTTG +
Preference number: 4 (lower is better)
Translates to: TVQFTSVIRLLFLESLWKNFKRP*ACTLTL
Trigger: CAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATT...CTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAATTGGACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422803.2
CDS-3UTR TCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTTCTGAAACACAAACCTaGTCCTCTCCATCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSSETQT*SSPSVS
Trigger: AGACACTGATGGAGAGGATCAGGTTTGTGTTTCAGA...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAATCACTCATTGAATCTTaGGTACCAGTAACAAAAGGT +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQSLIES*VPVTKG
Trigger: ACCTTTTGTTACTGGTACTCAAGATTCAATGAGTGA...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTTCACTCATTGAATCTTaGGTACCAGTAACAAAAGGT +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSSLIES*VPVTKG
Trigger: ACCTTTTGTTACTGGTACTCAAGATTCAATGAGTGA...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGATGTGGAAAGTGCTCTaGAGACTCTTCAAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLMWKVL*RLFKSG
Trigger: GCCACTTTTGAAGAGTCTTCAGAGCACTTTCCACAT...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGTCCTTTGGAAGTTGCTaGAGGTACACTGTGCGTTTT +
Preference number: 4 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLSFGSC*RYTVRF
Trigger: AAAACGCACAGTGTACCTTCAGCAACTTCCAAAGGA...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR TCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTAGAGACTCCTGGAACTaGTCAGATGTACATGTGTTC +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSRDSWN*SDVHVF
Trigger: GAACACATGTACATCTGATCAGTTCCAGGAGTCTCT...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR TCA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGATGCATCAGTCACTTTaGGGCTTGAGGTGGAGATTT +
Preference number: 4 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLMHQSL*GLRWRF
Trigger: AAATCTCCACCTCAAGCCTCAAAGTGACTGATGCAT...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR TCA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTAACAAAAGCCAGATCTaGAACCCATCATACACAAAA +
Preference number: 4 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSNKSQI*NPSYTK
Trigger: TTTTGTGTATGATGGGTTTCAGATCTGGCTTTTGTT...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR TCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAAAACAAAAGCCAGATCTaGAACCCATCATACACAAAA +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQNKSQI*NPSYTK
Trigger: TTTTGTGTATGATGGGTTTCAGATCTGGCTTTTGTT...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGAGGCTTTTCACCATTaGAGCTCTCTAACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: IYTLKFQKTLGMHINLVREAFHH*SSLTAC
Trigger: ACAAGCAGTTAGAGAGCTGCAATGGTGAAAAGCCTC...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp GGTAGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCATCAGTAGTCTTGAAAACCATTaGAGTCATCCTGAATATTTG +
Preference number: 4 (lower is better)
Translates to: GRCACLLYCRHESCKCISSLENH*SHPEYL
Trigger: CAAATATTCAGGATGACTGCAATGGTTTTCAAGACT...ACTGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR GCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTTATGGAAGGAAAACATaGTTCGAAAATTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCYGRKT*FENSLQ
Trigger: CTGGAGCGAATTTTCGAAGCATGTTTTCCTTCCATA...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGACTTGTTTCCAGCAAGTaGTTCAGGGAAGTAACTTCC +
Preference number: 4 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRLVSSK*FREVTS
Trigger: GGAAGTTACTTCCCTGAAGCACTTGCTGGAAACAAG...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGTTTTTATTGGCAAAGTaGTTGTTTCCAGCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLFLLAK*LFPASA
Trigger: AGCACTTGCTGGAAACAAGCACTTTGCCAATAAAAA...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTCATACCCAATCCTGCTaGATACATGGGCACTATAAC +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSHTQSC*IHGHYN
Trigger: GTTATAGTGCCCATGTATGCAGCAGGATTGGGTATG...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGTGTAGACATGAGTCTTaGAAATGCATCAGTCACTTT +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLCRHES*KCISHF
Trigger: AAAGTGACTGATGCATTTGCAAGACTCATGTCTACA...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCATCAGTTATCCGTCTaGTTTTTCTTGAGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCHQLSV*FFLRAC
Trigger: ACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATG...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTGGGACGAGTATAATCTaGTGTATCGAAATCAACAAA +
Preference number: 4 (lower is better)
Translates to: DSQCNLKRLKGISQTVKIGTSII*CIEINK
Trigger: TTTGTTGATTTCGATACACCAGATTATACTCGTCCC...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGTGTGGGGTCAATGTTTaGGCTTTGGAAATTAGTAAA +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLCGVNV*ALEISK
Trigger: TTTACTAATTTCCAAAGCCCAAACATTGACCCCACA...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAATGTGGGGTCAATGTTTaGGCTTTGGAAATTAGTAAA +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQCGVNV*ALEISK
Trigger: TTTACTAATTTCCAAAGCCCAAACATTGACCCCACA...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAAAATCATTTTCTTCTGTaGGGTCAATGTTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQNHFLL*GQCLGF
Trigger: AAAGCCCAAACATTGACCCCACAGAAGAAAATGATT...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAATCCAAAGTCATCACCTaGTTCACTAAAATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQSKVIT*FTKMWK
Trigger: TTTCCACATTTTAGTGAACCAGGTGATGACTTTGGA...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGTCCAAAGTCATCACCTaGTTCACTAAAATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLSKVIT*FTKMWK
Trigger: TTTCCACATTTTAGTGAACCAGGTGATGACTTTGGA...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGTTTCTTGAGAGCTTGTaGAAGGTGTTAACGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLFLESL*KVLTWL
Trigger: CAGCCACGTTAACACCTTCCACAAGCTCTCAAGAAA...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAAAATTTCAAAAGACCTTaGGCATGCACATTAACCTTG +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQNFKRP*ACTLTL
Trigger: CAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATT...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR TCA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGAAGAGTACATTCGAATaGTGTCTGGCTCCATTGTTC +
Preference number: 4 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLKSTFE*CLAPLF
Trigger: GAACAATGGAGCCAGACATCATTCGAATGTACTCTT...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGCTAAAATGTGGAAAGTaGTCTGAAGACTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLLKCGK*SEDSSK
Trigger: TTTTGAAGAGTCTTCAGAGCACTTTCCACATTTTAG...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAAAGTCTTGAAAACCATTaGAGTCATCCTGAATATTTG +
Preference number: 4 (lower is better)
Translates to: DTTSVFHKDINVYTPATQSLENH*SHPEYL
Trigger: CAAATATTCAGGATGACTGCAATGGTTTTCAAGACT...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTCATGAGTCTTGCAAATaGATCAGTCACTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSHESCK*ISHFEA
Trigger: AGCCTCAAAGTGACTGATGCATTTGCAAGACTCATG...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGCATTCGAATGATGTCTaGCTCCATTGTTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLHSNDV*LHCSVA
Trigger: AGCAACTGAACAATGGAGCCAGACATCATTCGAATG...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTGGGACGAGTATAATCTaGTGTATCGAAATCAACAAA +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCGTSII*CIEINK
Trigger: TTTGTTGATTTCGATACACCAGATTATACTCGTCCC...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGAGTTCTAAAATCTCCTaGAGAGAAACTTTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLSSKIS*RETFKC
Trigger: ACACTTGAAAGTTTCTCTCCAGGAGATTTTAGAACT...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGATCCTGTTGCAGTGTTaGAAGGCCTTGTTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLILLQC*KALFFN
Trigger: GTTGAAAAACAAGGCCTTCCAACACTGCAACAGGAT...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTTCTACTTTCTTCTTTaGGAGAACCAACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: DSQCNLKRLKGISQTVKIFYFLL*ENQLHH
Trigger: ATGATGAAGTTGGTTCTCCCAAAGAAGAAAGTAGAA...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTAATCATTTTCTTCTGTaGGGTCAATGTTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCNHFLL*GQCLGF
Trigger: AAAGCCCAAACATTGACCCCACAGAAGAAAATGATT...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGCATCAGGGACAAGTATaGAAGGAAAACATGCTTCGA +
Preference number: 4 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLHQGQV*KENMLR
Trigger: TCGAAGCATGTTTTCCTTCCATACTTGTCCCTGATG...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
3UTR CAA 72 bp GATCCATACCCTATAACAAAAGAGCAATTAAGTACCTaGCAAAAGGTCAAACAGCAATACGCCAGATTGAAA +
Preference number: 4 (lower is better)
Translates to: DPYPITKEQLST*QKVKQQYARLK
Trigger: TTTCAATCTGGCGTATTGCTGTTTGACCTTTTGCAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAAAATGTGGCAAAATCTaGAAATTCCTCAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRKCGKI*KFLSRT
Trigger: AGTCCTGCTGAGGAATTTGCAGATTTTGCCACATTT...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAAAAAATTCATCCTGTTaGAGTGTTGGAAGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRKNSSC*SVGRPC
Trigger: ACAAGGCCTTCCAACACTGCAACAGGATGAATTTTT...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTTATGGAAGGAAAACATaGTTCGAAAATTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSYGRKT*FENSLQ
Trigger: CTGGAGCGAATTTTCGAAGCATGTTTTCCTTCCATA...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTCATCAGTTATCCGTCTaGTTTTTCTTGAGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSHQLSV*FFLRAC
Trigger: ACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATG...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTAAAAGACCTTGGGCATaGACATTAACCTTGTTAGAG +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSKRPWA*TLTLLE
Trigger: CTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTAGTTCTAAAATCTCCTaGAGAGAAACTTTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCSSKIS*RETFKC
Trigger: ACACTTGAAAGTTTCTCTCCAGGAGATTTTAGAACT...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTTATTGTTTTCCCGAATaGTTAGTGCTTCTCTATCAT +
Preference number: 4 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCYCFPE*LVLLYH
Trigger: ATGATAGAGAAGCACTAACCATTCGGGAAAACAATA...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGACTCTCTCGTTTTTATTaGCAAAGTGCTTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRLSRFY*QSACFQ
Trigger: CTGGAAACAAGCACTTTGCCAATAAAAACGAGAGAG...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGTTTTTATTGGCAAAGTaGTTGTTTCCAGCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLFLLAK*LFPASA
Trigger: AGCACTTGCTGGAAACAAGCACTTTGCCAATAAAAA...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGTGTAGACATGAGTCTTaGAAATGCATCAGTCACTTT +
Preference number: 4 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLCRHES*KCISHF
Trigger: AAAGTGACTGATGCATTTGCAAGACTCATGTCTACA...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CCA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAAATTTCAAAAGACCTTaGGCATGCACATTAACCTTG +
Preference number: 4 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRNFKRP*ACTLTL
Trigger: CAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATT...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR GCA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGACTAAAATGTGGAAAGTaGTCTGAAGACTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRLKCGK*SEDSSK
Trigger: TTTTGAAGAGTCTTCAGAGCACTTTCCACATTTTAG...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR GCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTAGTCTTGAAAACCATTaGAGTCATCCTGAATATTTG +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSSLENH*SHPEYL
Trigger: CAAATATTCAGGATGACTGCAATGGTTTTCAAGACT...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGATATTGTTTTCCCGAATaGTTAGTGCTTCTCTATCAT +
Preference number: 4 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRYCFPE*LVLLYH
Trigger: ATGATAGAGAAGCACTAACCATTCGGGAAAACAATA...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTTTCTACTTTCTTCTTTaGGAGAACCAACTTCATCAT +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSFYFLL*ENQLHH
Trigger: ATGATGAAGTTGGTTCTCCCAAAGAAGAAAGTAGAA...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTAAGACTCTTCAAAAGTaGCATCACTCATTGAATCTT +
Preference number: 4 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSKTLQK*HHSLNL
Trigger: AAGATTCAATGAGTGATGCCACTTTTGAAGAGTCTT...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CCA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGAAGACTCTTCAAAAGTaGCATCACTCATTGAATCTT +
Preference number: 4 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLKTLQK*HHSLNL
Trigger: AAGATTCAATGAGTGATGCCACTTTTGAAGAGTCTT...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS GCA 90 bp TGTCAGCGCAGCAGCACCATGGACGCCCACCCGGAGTTTCACCGCTaGCGCGGGACCCCCATCCCACTACCCTCCGCCCTCTTCCGCCGC +
Preference number: 5 (lower is better)
Translates to: CQRSSTMDAHPEFHR*RGTPIPLPSALFRR
Trigger: GCGGCGGAAGAGGGCGGAGGGTAGTGGGATGGGGGTCCCGCGGCAGCGGTGAAACTCCGGGTGGGCGTCCATGGTGCTGCTGCGCTGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS CCA 90 bp AGCGGAAGGCCGGCTGCTCACAGCCCTGTCAGCGCAGCAGCACCATaGACGCCCACCCGGAGTTTCACCGCTGCCGCGGGACCCCCATCC +
Preference number: 5 (lower is better)
Translates to: SGRPAAHSPVSAAAP*TPTRSFTAAAGPPS
Trigger: GGATGGGGGTCCCGCGGCAGCGGTGAAACTCCGGGTGGGCGTCCATGGTGCTGCTGCGCTGACAGGGCTGTGAGCAGCCGGCCTTCCGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS CCA 90 bp TTGCTATGGGAGCCGCCCCACTGGTATCTCAAGCCATGTGCATCATaGATATCCTGTAGCTCAGTCCACACATCTAGCAATTCCCCACTT +
Preference number: 5 (lower is better)
Translates to: LLWEPPHWYLKPCAS*ISCSSVHTSSNSPL
Trigger: AAGTGGGGAATTGCTAGATGTGTGGACTGAGCTACAGGATATCCATGATGCACATGGCTTGAGATACCAGTGGGGCGGCTCCCATAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000498706.5
CDS GCA 90 bp GAATGTTTCGGGTGTCTATTCCCAAGGAGGACAAAAGCTTCTTGTTaGTATGGGAGCCGCCCCACTGGTATCTCAAGCCATGTGCATCAT +
Preference number: 5 (lower is better)
Translates to: ECFGCLFPRRTKASC*YGSRPTGISSHVHH
Trigger: ATGATGCACATGGCTTGAGATACCAGTGGGGCGGCTCCCATAGCAACAAGAAGCTTTTGTCCTCCTTGGGAATAGACACCCGAAACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000498706.5
CDS TCA 90 bp GGCCCAAAGAAATCAAGGTTCAGAAGAGTGGAACCTCCACTAGCTTaGAATTCAGTGACCGTGTTGGTAGGCAGCCACACAGAAGGTAAG +
Preference number: 5 (lower is better)
Translates to: GPKKSRFRRVEPPLA*NSVTVLVGSHTEGK
Trigger: CTTACCTTCTGTGTGGCTGCCTACCAACACGGTCACTGAATTTCAAGCTAGTGGAGGTTCCACTCTTCTGAACCTTGATTTCTTTGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498706.5
CDS GCA 90 bp CTTGTGGAAGGTGTTAACGTGGCTGGGAACATCAACACCTTGGCATaGATGAATGTTAAGTCAGGAAGGCCAGCGATCACCTTGATAGCT +
Preference number: 5 (lower is better)
Translates to: LVEGVNVAGNINTLA*MNVKSGRPAITLIA
Trigger: AGCTATCAAGGTGATCGCTGGCCTTCCTGACTTAACATTCATGCATGCCAAGGTGTTGATGTTCCCAGCCACGTTAACACCTTCCACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000498706.5
CDS GCA 90 bp TCTAACATACCCAATCCTGCTGCATACATGGGCACTATAACAGGCTaGTTCTTATTGCCCGTGAAGAGAATGTTTCGGGTGTCTATTCCC +
Preference number: 5 (lower is better)
Translates to: SNIPNPAAYMGTITG*FLLPVKRMFRVSIP
Trigger: GGGAATAGACACCCGAAACATTCTCTTCACGGGCAATAAGAAGCAGCCTGTTATAGTGCCCATGTATGCAGCAGGATTGGGTATGTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000422803.2
ENST00000498706.5
CDS CCA 90 bp GTCCAATTCACATCAGTTATCCGTCTGCTTTTTCTTGAGAGCTTGTaGAAGGTGTTAACGTGGCTGGGAACATCAACACCTTGGCATGCA +
Preference number: 5 (lower is better)
Translates to: VQFTSVIRLLFLESL*KVLTWLGTSTPWHA
Trigger: TGCATGCCAAGGTGTTGATGTTCCCAGCCACGTTAACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000498706.5
CDS CCA 90 bp GTCCAATTCACATCAGTTATCCGTCTGCTTTTTCTTGAGAGCTTGTaGAAGGTGTTAACGTGGCTGGGAACATCACACCTTGGCATGCAT +
Preference number: 5 (lower is better)
Translates to: VQFTSVIRLLFLESL*KVLTWLGTSHLGMH
Trigger: ATGCATGCCAAGGTGTGATGTTCCCAGCCACGTTAACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422803.2
CDS-3UTR CAA 90 bp GGTAGATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCATCAGTGGTACACTGTGCGTTTaGGGGGTTCCTGGAGTATCA +
Preference number: 5 (lower is better)
Translates to: GRCACLLYCRHESCKCISGTLCV*GVPGVS
Trigger: TGATACTCCAGGAACCCCCAAAACGCACAGTGTACC...ACTGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR CAA 90 bp GATGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCATCAGTCACTCTGCTCCTTTGGAAGTaGCTGAAGGTACACTGTGCG +
Preference number: 5 (lower is better)
Translates to: DVLVFSTVDMSLANASVTLLLWK*LKVHCA
Trigger: CGCACAGTGTACCTTCAGCAACTTCCAAAGGAGCAG...AGTGACTGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR CAA 90 bp ACTGTCCAATTCACATCAGTTATCCGTCTGCTTTTTCTTGAGAGCTTGTGGAAGGGTTTCAGTGGTTCCTaGGTGGGCTCTAACATACCC +
Preference number: 5 (lower is better)
Translates to: TVQFTSVIRLLFLESLWKGFSGS*VGSNIP
Trigger: GGGTATGTTAGAGCCCACCAAGGAACCACTGAAACC...CTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAATTGGACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422803.2
CDS-3UTR CAA 90 bp TGTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCATCAGTCACTTTGAGGCTGGTTTCAGTGGTTCCTaGGTGGGCTCTAACATACCC +
Preference number: 5 (lower is better)
Translates to: CLLYCRHESCKCISHFEAGFSGS*VGSNIP
Trigger: GGGTATGTTAGAGCCCACCAAGGAACCACTGAAACC...AGCCTCAAAGTGACTGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS TCA 90 bp TCCTCAGCAGGACTAGGTACAGAGTCTAAATTATACTCAGTGCTATaGGTGCTAAGAGGCTTCCGTCCCTTTGAATCAGCTACATTGTCC +
Preference number: 5 (lower is better)
Translates to: SSAGLGTESKLYSVL*VLRGFRPFESATLS
Trigger: GGACAATGTAGCTGATTCAAAGGGACGGAAGCCTCTTAGCACTCATAGCACTGAGTATAATTTAGACTCTGTACCTAGTCCTGCTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409933.5
ENST00000498706.5
CDS TCA 90 bp AAGTGCTCTGAAGACTCTTCAAAAGTGGCATCACTCATTGAATCTTaGGTACCAGTAACAAAAGGTGGAGTTGAGCCACTGGCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: KCSEDSSKVASLIES*VPVTKGGVEPLAEP
Trigger: TGGCTCTGCCAGTGGCTCAACTCCACCTTTTGTTACTGGTACTCAAGATTCAATGAGTGATGCCACTTTTGAAGAGTCTTCAGAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000498706.5
CDS-3UTR CAA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTGGTACACTGTGCGTTTaGGGGGTTCCTGGAGTATCA +
Preference number: 5 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSGTLCV*GVPGVS
Trigger: TGATACTCCAGGAACCCCCAAAACGCACAGTGTACC...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTGGTACACTGTGCGTTTaGGGGGTTCCTGGAGTATCA +
Preference number: 5 (lower is better)
Translates to: DSQCNLKRLKGISQTVKIGTLCV*GVPGVS
Trigger: TGATACTCCAGGAACCCCCAAAACGCACAGTGTACC...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAACTGCTCCTTTGGAAGTaGCTGAAGGTACACTGTGCG +
Preference number: 5 (lower is better)
Translates to: DTTSVFHKDINVYTPATQLLLWK*LKVHCA
Trigger: CGCACAGTGTACCTTCAGCAACTTCCAAAGGAGCAG...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTCTGCTCCTTTGGAAGTaGCTGAAGGTACACTGTGCG +
Preference number: 5 (lower is better)
Translates to: DSQCNLKRLKGISQTVKILLLWK*LKVHCA
Trigger: CGCACAGTGTACCTTCAGCAACTTCCAAAGGAGCAG...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGGGTTTCAGTGGTTCCTaGGTGGGCTCTAACATACCC +
Preference number: 5 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLGFSGS*VGSNIP
Trigger: GGGTATGTTAGAGCCCACCAAGGAACCACTGAAACC...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CAA 90 bp GACATGAGTCTTGCAAATGCATCAGTCACTTTGAGGCTTGAGGTGGAGATTTCCAATGCATCAGTCACTTaGAGGCTTGAGGTGGAGATT +
Preference number: 5 (lower is better)
Translates to: DMSLANASVTLRLEVEISNASVT*RLEVEI
Trigger: AATCTCCACCTCAAGCCTCAAAGTGACTGATGCATT...GGAAATCTCCACCTCAAGCCTCAAAGTGACTGATGCATTTGCAAGACTCATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR CAA 90 bp ACTGTCCAATTCACATCAGTTATCCGTCTGCTTTTTCTTGAGAGCTTGTGGAAGAGGCCAGCGATCACCTaGATAGCTTCTTCACTTAGG +
Preference number: 5 (lower is better)
Translates to: TVQFTSVIRLLFLESLWKRPAIT*IASSLR
Trigger: CCTAAGTGAAGAAGCTATCAAGGTGATCGCTGGCCT...CTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAATTGGACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422803.2
CDS-3UTR CAA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGTCATCCTCTGCTCCATaGTCTAATGGTGGTGGGGAT +
Preference number: 5 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLSSSAP*SNGGGD
Trigger: ATCCCCACCACCATTAGACAATGGAGCAGAGGATGA...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAATCATCCTCTGCTCCATaGTCTAATGGTGGTGGGGAT +
Preference number: 5 (lower is better)
Translates to: DTTSVFHKDINVYTPATQSSSAP*SNGGGD
Trigger: ATCCCCACCACCATTAGACAATGGAGCAGAGGATGA...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAAGAGGCTTCCGTCCCTTaGAATCAGCTACATTGTCCA +
Preference number: 5 (lower is better)
Translates to: DTTSVFHKDINVYTPATQEASVP*NQLHCP
Trigger: TGGACAATGTAGCTGATTCAAAGGGACGGAAGCCTC...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp GCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCATCAGTCACTTTGAGCTAGCAACTGCTCCTTaGGAAGTTGCTGAAGGTACA +
Preference number: 5 (lower is better)
Translates to: ACLLYCRHESCKCISHFELATAP*EVAEGT
Trigger: TGTACCTTCAGCAACTTCCAAAGGAGCAGTTGCTAG...CTCAAAGTGACTGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR CAA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGAGGCCAGCGATCACCTaGATAGCTTCTTCACTTAGG +
Preference number: 5 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLRPAIT*IASSLR
Trigger: CCTAAGTGAAGAAGCTATCAAGGTGATCGCTGGCCT...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CAA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTAGAGCAGGTATGCTTTaGATGGTAGGGAAGGGATGG +
Preference number: 5 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSRAGML*MVGKGW
Trigger: CCATCCCTTCCCTACCATCAAAAGCATACCTGCTCT...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS TCA 90 bp GCTTCTGAATTATCAGCTGAGTCTACCAAACTCCAAGCCTTTGACTaGACACCTGACTGTAAAAATTCATCCTGTTGCAGTGTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: ASELSAESTKLQAFD*TPDCKNSSCCSVGR
Trigger: CCTTCCAACACTGCAACAGGATGAATTTTTACAGTCAGGTGTTCAGTCAAAGGCTTGGAGTTTGGTAGACTCAGCTGATAATTCAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409933.5
ENST00000498706.5
CDS TCA 90 bp AATAGAAACTGTCCAATTCACATCAGTTATCCGTCTGCTTTTTCTTaGGAGCTTGTGGAAGGTGTTAACGTGGCTGGGAACATCAACACC +
Preference number: 5 (lower is better)
Translates to: NRNCPIHISYPSAFS*ELVEGVNVAGNINT
Trigger: GGTGTTGATGTTCCCAGCCACGTTAACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAATTGGACAGTTTCTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000498706.5
CDS TCA 90 bp AATAGAAACTGTCCAATTCACATCAGTTATCCGTCTGCTTTTTCTTaGGAGCTTGTGGAAGGTGTTAACGTGGCTGGGAACATCACACCT +
Preference number: 5 (lower is better)
Translates to: NRNCPIHISYPSAFS*ELVEGVNVAGNITP
Trigger: AGGTGTGATGTTCCCAGCCACGTTAACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAATTGGACAGTTTCTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422803.2
CDS-3UTR CAA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTGGAGGCTTTTCACCATaGCAGCTCTCTAACTGCTTG +
Preference number: 5 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCGGFSP*QLSNCL
Trigger: CAAGCAGTTAGAGAGCTGCAATGGTGAAAAGCCTCC...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTGAGGCTTCCGTCCCTTaGAATCAGCTACATTGTCCA +
Preference number: 5 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCEASVP*NQLHCP
Trigger: TGGACAATGTAGCTGATTCAAAGGGACGGAAGCCTC...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGCCATCAGTGTCTCCTTaGTTATCCAAGCTTCTACCC +
Preference number: 5 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLPSVSP*LSKLLP
Trigger: GGGTAGAAGCTTGGATAACAAAGGAGACACTGATGG...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp ACTGTCCAATTCACATCAGTTATCCGTCTGCTTTTTCTTGAGAGCTTGTGGAAGAATGCATCAGTCACTTaGAGGCTTGAGGTGGAGATT +
Preference number: 5 (lower is better)
Translates to: TVQFTSVIRLLFLESLWKNASVT*RLEVEI
Trigger: AATCTCCACCTCAAGCCTCAAAGTGACTGATGCATT...CTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAATTGGACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422803.2
CDS-3UTR CAA 90 bp ACTGTCCAATTCACATCAGTTATCCGTCTGCTTTTTCTTGAGAGCTTGTGGAAGCTTTTTCTTGAGAGCTaGTGGAAGGTGTTAACGTGG +
Preference number: 5 (lower is better)
Translates to: TVQFTSVIRLLFLESLWKLFLES*WKVLTW
Trigger: CCACGTTAACACCTTCCACAAGCTCTCAAGAAAAAG...CTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAATTGGACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000422803.2
CDS-3UTR CAA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAATCCGTCTGCTTTTTCTaGAGAGCTTGTGGAAGGTGT +
Preference number: 5 (lower is better)
Translates to: DTTSVFHKDINVYTPATQSVCFF*RACGRC
Trigger: ACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGGA...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CAA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTAGAGCAGGTATGCTTTaGATGGTAGGGAAGGGATGG +
Preference number: 5 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCRAGML*MVGKGW
Trigger: CCATCCCTTCCCTACCATCAAAAGCATACCTGCTCT...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CAA 90 bp ACTGTCCAATTCACATCAGTTATCCGTCTGCTTTTTCTTGAGAGCTTGTGGAAGTGGGAACATCACACCTaGGCATGCATGAATGTTAAG +
Preference number: 5 (lower is better)
Translates to: TVQFTSVIRLLFLESLWKWEHHT*ACMNVK
Trigger: CTTAACATTCATGCATGCCAAGGTGTGATGTTCCCA...CTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAATTGGACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422803.2
CDS TCA 90 bp TGGTGTATCGAAATCAACAAACCCTACACCAGAAGGGCTAACTTCTaGAAACCCACCAAATTCCCCAAATTCATCATCATCATCATCCTC +
Preference number: 5 (lower is better)
Translates to: WCIEINKPYTRRANF*KPTKFPKFIIIIIL
Trigger: GAGGATGATGATGATGATGAATTTGGGGAATTTGGTGGGTTTTCAGAAGTTAGCCCTTCTGGTGTAGGGTTTGTTGATTTCGATACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409933.5
ENST00000498706.5
CDS TCA 90 bp CTGAAACCTCTGTTAGTCACTATGCTTATTTCTGAAACACAAACCTaGTCCTCTCCATCAGTGTCTCCTTTGTTATCCAAGCTTCTACCC +
Preference number: 5 (lower is better)
Translates to: LKPLLVTMLISETQT*SSPSVSPLLSKLLP
Trigger: GGGTAGAAGCTTGGATAACAAAGGAGACACTGATGGAGAGGATCAGGTTTGTGTTTCAGAAATAAGCATAGTGACTAACAGAGGTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409933.5
ENST00000498706.5
CDS-3UTR CAA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTCAGTGTTGGAAGGCCTaGTTTTTCAACACTGAAACC +
Preference number: 5 (lower is better)
Translates to: DSQCNLKRLKGISQTVKIQCWKA*FFNTET
Trigger: GGTTTCAGTGTTGAAAAACAAGGCCTTCCAACACTG...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAACATCCTGTTGCAGTGTaGGAAGGCCTTGTTTTTCAA +
Preference number: 5 (lower is better)
Translates to: DTTSVFHKDINVYTPATQHPVAV*EGLVFQ
Trigger: TTGAAAAACAAGGCCTTCCAACACTGCAACAGGATG...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTAGCAACTGCTCCTTaGGAAGTTGCTGAAGGTACA +
Preference number: 5 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCLATAP*EVAEGT
Trigger: TGTACCTTCAGCAACTTCCAAAGGAGCAGTTGCTAG...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTACAGGCTGCTTCTTATaGCCCGTGAAGAGAATGTTT +
Preference number: 5 (lower is better)
Translates to: DSQCNLKRLKGISQTVKITGCFL*PVKRMF
Trigger: AAACATTCTCTTCACGGGCAATAAGAAGCAGCCTGT...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CAA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGACAGGCTGCTTCTTATaGCCCGTGAAGAGAATGTTT +
Preference number: 5 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLTGCFL*PVKRMF
Trigger: AAACATTCTCTTCACGGGCAATAAGAAGCAGCCTGT...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CAA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTGGTTTCAGTGGTTCCTaGGTGGGCTCTAACATACCC +
Preference number: 5 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSGFSGS*VGSNIP
Trigger: GGGTATGTTAGAGCCCACCAAGGAACCACTGAAACC...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CAA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGAATGCATCAGTCACTTaGAGGCTTGAGGTGGAGATT +
Preference number: 5 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLNASVT*RLEVEI
Trigger: AATCTCCACCTCAAGCCTCAAAGTGACTGATGCATT...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CAA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGGGGAACATCAACACCTaGGCATGCATGAATGTTAAG +
Preference number: 5 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLGNINT*ACMNVK
Trigger: CTTAACATTCATGCATGCCAAGGTGTTGATGTTCCC...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAACTTTTTCTTGAGAGCTaGTGGAAGGTGTTAACGTGG +
Preference number: 5 (lower is better)
Translates to: DTTSVFHKDINVYTPATQLFLES*WKVLTW
Trigger: CCACGTTAACACCTTCCACAAGCTCTCAAGAAAAAG...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CAA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTTCCGTCTGCTTTTTCTaGAGAGCTTGTGGAAGGTGT +
Preference number: 5 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCSVCFF*RACGRC
Trigger: ACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGGA...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS GCA 90 bp TGCTTCAATCAAAACTGGAAGCCATACCAGAAAGACCGAAAGGAATaGGTACCCGTTAAAGGGAAACAATACTTTAATCTCAACCCAACA +
Preference number: 5 (lower is better)
Translates to: CFNQNWKPYQKDRKE*VPVKGKQYFNLNPT
Trigger: TGTTGGGTTGAGATTAAAGTATTGTTTCCCTTTAACGGGTACGCATTCCTTTCGGTCTTTCTGGTATGGCTTCCAGTTTTGATTGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498706.5
CDS-3UTR CAA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTGGAGGCTTTTCACCATaGCAGCTCTCTAACTGCTTG +
Preference number: 5 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSGGFSP*QLSNCL
Trigger: CAAGCAGTTAGAGAGCTGCAATGGTGAAAAGCCTCC...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAAACACTGCAAACCCATTaGTTAGAATCTCCAGACAAG +
Preference number: 5 (lower is better)
Translates to: DTTSVFHKDINVYTPATQTLQTH*LESPDK
Trigger: CTTGTCTGGAGATTCTAACAAATGGGTTTGCAGTGT...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAATTATTGGCAAAGTGCTaGTTTCCAGCAAGTGCTTCA +
Preference number: 5 (lower is better)
Translates to: DTTSVFHKDINVYTPATQLLAKC*FPASAS
Trigger: TGAAGCACTTGCTGGAAACAAGCACTTTGCCAATAA...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAACCTCTCTCGTTTTTATaGGCAAAGTGCTTGTTTCCA +
Preference number: 5 (lower is better)
Translates to: DTTSVFHKDINVYTPATQPLSFL*AKCLFP
Trigger: TGGAAACAAGCACTTTGCCAATAAAAACGAGAGAGG...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAAGGCCAGCGATCACCTaGATAGCTTCTTCACTTAGG +
Preference number: 5 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRRPAIT*IASSLR
Trigger: CCTAAGTGAAGAAGCTATCAAGGTGATCGCTGGCCT...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CAA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTGGGAACATCAACACCTaGGCATGCATGAATGTTAAG +
Preference number: 5 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCGNINT*ACMNVK
Trigger: CTTAACATTCATGCATGCCAAGGTGTTGATGTTCCC...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp TGTGCTTGTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCATCAGTCACTTTTCCAATCTCACCTTCTaGCCCATTTTTAAGTTTTGC +
Preference number: 5 (lower is better)
Translates to: CACLLYCRHESCKCISHFSNLTF*PIFKFC
Trigger: GCAAAACTTAAAAATGGGCAAGAAGGTGAGATTGGA...AAAGTGACTGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487769.2
CDS-3UTR CAA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTCTAGCAACTGCTCCTTaGGAAGTTGCTGAAGGTACA +
Preference number: 5 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSLATAP*EVAEGT
Trigger: TGTACCTTCAGCAACTTCCAAAGGAGCAGTTGCTAG...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTTTATTGGCAAAGTGCTaGTTTCCAGCAAGTGCTTCA +
Preference number: 5 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCLLAKC*FPASAS
Trigger: TGAAGCACTTGCTGGAAACAAGCACTTTGCCAATAA...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGATCCGTCTGCTTTTTCTaGAGAGCTTGTGGAAGGTGT +
Preference number: 5 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRSVCFF*RACGRC
Trigger: ACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGGA...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CAA 90 bp ACTGTCCAATTCACATCAGTTATCCGTCTGCTTTTTCTTGAGAGCTTGTGGAAGATTAAATGGGGGACTTaGGAGCTTATTTATGATAGC +
Preference number: 5 (lower is better)
Translates to: TVQFTSVIRLLFLESLWKIKWGT*ELIYDS
Trigger: GCTATCATAAATAAGCTCCAAAGTCCCCCATTTAAT...CTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAATTGGACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000422803.2
CDS-3UTR CAA 90 bp CAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTTGGCATGCACATTAACCTaGTTAGAGGTTCTTCTACAT +
Preference number: 5 (lower is better)
Translates to: QSMQSEKTEGDFTDSEDLACTLT*LEVLLH
Trigger: ATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGC...CAAATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CAA 90 bp GACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACAAGCATGCACATTAACCTaGTTAGAGGTTCTTCTACAT +
Preference number: 5 (lower is better)
Translates to: DTTSVFHKDINVYTPATQACTLT*LEVLLH
Trigger: ATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGC...TTGTGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CAA 90 bp AAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTCTCTGCATGCACATTAACCTaGTTAGAGGTTCTTCTACAT +
Preference number: 5 (lower is better)
Translates to: KRPWACTLTLLEVLLHVSACTLT*LEVLLH
Trigger: ATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGC...AGAGACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS GCA 90 bp ACATGGATCTATGCACACTGTTTTTGGCTAAATAATTGTGCTTTGTaGTTTGAAGCAGCCTCTAGTCACAAGACTTTGCATCCAAGAAAA +
Preference number: 5 (lower is better)
Translates to: TWIYAHCFWLNNCAL*FEAASSHKTLHPRK
Trigger: TTTTCTTGGATGCAAAGTCTTGTGACTAGAGGCTGCTTCAAAGCACAAAGCACAATTATTTAGCCAAAAACAGTGTGCATAGATCCATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498706.5
CDS-3UTR CAA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGACAGTGTTGGAAGGCCTaGTTTTTCAACACTGAAACC +
Preference number: 5 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRQCWKA*FFNTET
Trigger: GGTTTCAGTGTTGAAAAACAAGGCCTTCCAACACTG...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTCATCCTGTTGCAGTGTaGGAAGGCCTTGTTTTTCAA +
Preference number: 5 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSHPVAV*EGLVFQ
Trigger: TTGAAAAACAAGGCCTTCCAACACTGCAACAGGATG...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGACAGGCTGCTTCTTATaGCCCGTGAAGAGAATGTTT +
Preference number: 5 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLTGCFL*PVKRMF
Trigger: AAACATTCTCTTCACGGGCAATAAGAAGCAGCCTGT...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CAA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAAATGCATCAGTCACTTaGAGGCTTGAGGTGGAGATT +
Preference number: 5 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRNASVT*RLEVEI
Trigger: AATCTCCACCTCAAGCCTCAAAGTGACTGATGCATT...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CAA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGACTTTTTCTTGAGAGCTaGTGGAAGGTGTTAACGTGG +
Preference number: 5 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRLFLES*WKVLTW
Trigger: CCACGTTAACACCTTCCACAAGCTCTCAAGAAAAAG...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CAA 90 bp GACAGTCAATGCAATCTGAAAAGACTGAAGGGGATTTCACAGACAGTGAAGATTATTAAATGGGGGACTTaGGAGCTTATTTATGATAGC +
Preference number: 5 (lower is better)
Translates to: DSQCNLKRLKGISQTVKIIKWGT*ELIYDS
Trigger: GCTATCATAAATAAGCTCCAAAGTCCCCCATTTAAT...AATCTTCACTGTCTGTGAAATCCCCTTCAGTCTTTTCAGATTGCATTGACTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS TCA 90 bp TTTGCAACAGGTTCAGTGCCTGTTCCACTAGATTTTCTTGCCAATTaGCATTCTTCTGATAAATTATCAGAAGTCTGTTTTAGGTCTGAC +
Preference number: 5 (lower is better)
Translates to: FATGSVPVPLDFLAN*HSSDKLSEVCFRSD
Trigger: GTCAGACCTAAAACAGACTTCTGATAATTTATCAGAAGAATGTCAATTGGCAAGAAAATCTAGTGGAACAGGCACTGAACCTGTTGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000487769.2
ENST00000498706.5
CDS-3UTR CAA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTTTTCTACTTTCTTCTTaGGGAGAACCAACTTCATCA +
Preference number: 5 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCFLLSS*GEPTSS
Trigger: TGATGAAGTTGGTTCTCCCAAAGAAGAAAGTAGAAA...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGACCTCTCTCGTTTTTATaGGCAAAGTGCTTGTTTCCA +
Preference number: 5 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRPLSFL*AKCLFP
Trigger: TGGAAACAAGCACTTTGCCAATAAAAACGAGAGAGG...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp TTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAGGTTCTTCTACATGTAAATTTCAAAAGACCTaGGGCATGCACATTAACCTT +
Preference number: 5 (lower is better)
Translates to: FQKTLGMHINLVRGSSTCKFQKT*GMHINL
Trigger: AAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTT...ACATGTAGAAGAACCTCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS CCA 90 bp GAATCATCCAAATCATTTTCTTCTGTGGGGTCAATGTTTGGGCTTTaGAAATTAGTAAACTTTCTACTTTCTTCTTTGGGAGAACCAACT +
Preference number: 5 (lower is better)
Translates to: ESSKSFSSVGSMFGL*KLVNFLLSSLGEPT
Trigger: AGTTGGTTCTCCCAAAGAAGAAAGTAGAAAGTTTACTAATTTCCAAAGCCCAAACATTGACCCCACAGAAGAAAATGATTTGGATGATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000498706.5
CDS-3UTR CAA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTTCCAATCTCACCTTCTaGCCCATTTTTAAGTTTTGC +
Preference number: 5 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSSNLTF*PIFKFC
Trigger: GCAAAACTTAAAAATGGGCAAGAAGGTGAGATTGGA...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGTCCAATCTCACCTTCTaGCCCATTTTTAAGTTTTGC +
Preference number: 5 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLSNLTF*PIFKFC
Trigger: GCAAAACTTAAAAATGGGCAAGAAGGTGAGATTGGA...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGTTTCTACTTTCTTCTTaGGGAGAACCAACTTCATCA +
Preference number: 5 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLFLLSS*GEPTSS
Trigger: TGATGAAGTTGGTTCTCCCAAAGAAGAAAGTAGAAA...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS-3UTR CAA 90 bp TCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTACCTTGATTAAATGGGGGACTTaGGAGCTTATTTATGATAGC +
Preference number: 5 (lower is better)
Translates to: SSSDNDPYPITKEQLSTLIKWGT*ELIYDS
Trigger: GCTATCATAAATAAGCTCCAAAGTCCCCCATTTAAT...CAAGGTACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CAA 90 bp ATTTACACACTGAAATTTCAAAAGACCTTGGGCATGCACATTAACCTTGTTAGAAAATTTCAAAAGACCTaGGGCATGCACATTAACCTT +
Preference number: 5 (lower is better)
Translates to: IYTLKFQKTLGMHINLVRKFQKT*GMHINL
Trigger: AAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTT...TCTAACAAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTTCAGTGTGTAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS-3UTR CAA 90 bp CTCCAATCAAGTTCTGACAATGATCCATACCCTATAACAAAAGAGCAATTAAGTAAATTTCAAAAGACCTaGGGCATGCACATTAACCTT +
Preference number: 5 (lower is better)
Translates to: LQSSSDNDPYPITKEQLSKFQKT*GMHINL
Trigger: AAGGTTAATGTGCATGCCCAAGGTCTTTTGAAATTT...ACTTAATTGCTCTTTTGTTATAGGGTATGGATCATTGTCAGAACTTGATTGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000422803.2
CDS CCA 72 bp CCGGCTGCTCACAGCCCTGTCAGCGCAGCAGCACCATaGACGCCCACCCGGAGTTTCACCGCTGCCGCGGGA +
Preference number: 6 (lower is better)
Translates to: PAAHSPVSAAAP*TPTRSFTAAAG
Trigger: TCCCGCGGCAGCGGTGAAACTCCGGGTGGGCGTCCATGGTGCTGCTGCGCTGACAGGGCTGTGAGCAGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS TCA 72 bp CCCGGGGAAGGACCGTCTATTCCGACGCGGAACTGGTaGGAGCGGAAGGCCGGCTGCTCACAGCCCTGTCAG +
Preference number: 6 (lower is better)
Translates to: PGEGPSIPTRNW*ERKAGCSQPCQ
Trigger: CTGACAGGGCTGTGAGCAGCCGGCCTTCCGCTCTCACCAGTTCCGCGTCGGAATAGACGGTCCTTCCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238855.11
ENST00000238856.8
CDS GCA 72 bp GGTGTTAACGTGGCTGGGAACATCAACACCTTGGCATaGATGAATGTTAAGTCAGGAAGGCCAGCGATCACC +
Preference number: 6 (lower is better)
Translates to: GVNVAGNINTLA*MNVKSGRPAIT
Trigger: GGTGATCGCTGGCCTTCCTGACTTAACATTCATGCATGCCAAGGTGTTGATGTTCCCAGCCACGTTAACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000498706.5
CDS GCA 72 bp CCCAATCCTGCTGCATACATGGGCACTATAACAGGCTaGTTCTTATTGCCCGTGAAGAGAATGTTTCGGGTG +
Preference number: 6 (lower is better)
Translates to: PNPAAYMGTITG*FLLPVKRMFRV
Trigger: CACCCGAAACATTCTCTTCACGGGCAATAAGAAGCAGCCTGTTATAGTGCCCATGTATGCAGCAGGATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000422803.2
ENST00000498706.5
CDS TCA 72 bp CTCAGTGCTATGAGTGCTAAGAGGCTTCCGTCCCTTTaGATCAGCTACATTGTCCAGATCATCTGTTCCCTG +
Preference number: 6 (lower is better)
Translates to: LSAMSAKRLPSL*ISYIVQIICSL
Trigger: CAGGGAACAGATGATCTGGACAATGTAGCTGATTCAAAGGGACGGAAGCCTCTTAGCACTCATAGCACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409933.5
ENST00000498706.5
CDS CAA 72 bp GCTGCATACATGGGCACTATAACAGGCTGCTTCTTATaGCCCGTGAAGAGAATGTTTCGGGTGTCTATTCCC +
Preference number: 6 (lower is better)
Translates to: AAYMGTITGCFL*PVKRMFRVSIP
Trigger: GGGAATAGACACCCGAAACATTCTCTTCACGGGCAATAAGAAGCAGCCTGTTATAGTGCCCATGTATGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000422803.2
ENST00000498706.5
CDS CAA 90 bp ACCTTGGCATGCATGAATGTTAAGTCAGGAAGGCCAGCGATCACCTaGATAGCTTCTTCACTTAGGTGCTCTTCTCTTTTCGGTTTCCTG +
Preference number: 6 (lower is better)
Translates to: TLACMNVKSGRPAIT*IASSLRCSSLFGFL
Trigger: CAGGAAACCGAAAAGAGAAGAGCACCTAAGTGAAGAAGCTATCAAGGTGATCGCTGGCCTTCCTGACTTAACATTCATGCATGCCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238855.11
ENST00000409933.5
ENST00000422803.2
CDS CAA 90 bp ACTGTCCAATTCACATCAGTTATCCGTCTGCTTTTTCTTGAGAGCTaGTGGAAGGTGTTAACGTGGCTGGGAACATCACACCTTGGCATG +
Preference number: 6 (lower is better)
Translates to: TVQFTSVIRLLFLES*WKVLTWLGTSHLGM
Trigger: CATGCCAAGGTGTGATGTTCCCAGCCACGTTAACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAATTGGACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422803.2
CDS TCA 72 bp AAATCAAGGTTCAGAAGAGTGGAACCTCCACTAGCTTaGAATTCAGTGACCGTGTTGGTAGGCAGCCACACA +
Preference number: 6 (lower is better)
Translates to: KSRFRRVEPPLA*NSVTVLVGSHT
Trigger: TGTGTGGCTGCCTACCAACACGGTCACTGAATTTCAAGCTAGTGGAGGTTCCACTCTTCTGAACCTTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498706.5
CDS CCA 72 bp CTGCTTTTTCTTGAGAGCTTGTGGAAGGTGTTAACGTaGCTGGGAACATCACACCTTGGCATGCATGAATGT +
Preference number: 6 (lower is better)
Translates to: LLFLESLWKVLT*LGTSHLGMHEC
Trigger: ACATTCATGCATGCCAAGGTGTGATGTTCCCAGCCACGTTAACACCTTCCACAAGCTCTCAAGAAAAAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422803.2
CDS CAA 72 bp ATTCCCCACTTTCAGGTAAGGCCTCTCTCGTTTTTATaGGCAAAGTGCTTGTTTCCAGCAAGTGCTTCAGGG +
Preference number: 6 (lower is better)
Translates to: IPHFQVRPLSFL*AKCLFPASASG
Trigger: CCCTGAAGCACTTGCTGGAAACAAGCACTTTGCCAATAAAAACGAGAGAGGCCTTACCTGAAAGTGGGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000498706.5
CDS CAA 90 bp ACCTTGGCATGCATGAATGTTAAGTCAGGAAGGCCAGCGATCACCTaGATAGCTTCTTCACTTAGGTGCTCTTCTCTTTTCGGTTTCCTA +
Preference number: 6 (lower is better)
Translates to: TLACMNVKSGRPAIT*IASSLRCSSLFGFL
Trigger: TAGGAAACCGAAAAGAGAAGAGCACCTAAGTGAAGAAGCTATCAAGGTGATCGCTGGCCTTCCTGACTTAACATTCATGCATGCCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238856.8
ENST00000409183.5
ENST00000498706.5
CDS CAA 90 bp ACTGTCCAATTCACATCAGTTATCCGTCTGCTTTTTCTTGAGAGCTaGTGGAAGGTGTTAACGTGGCTGGGAACATCAACACCTTGGCAT +
Preference number: 6 (lower is better)
Translates to: TVQFTSVIRLLFLES*WKVLTWLGTSTPWH
Trigger: ATGCCAAGGTGTTGATGTTCCCAGCCACGTTAACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAATTGGACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000498706.5
CDS CCA 72 bp ACATCAGTTATCCGTCTGCTTTTTCTTGAGAGCTTGTaGAAGGTGTTAACGTGGCTGGGAACATCAACACCT +
Preference number: 6 (lower is better)
Translates to: TSVIRLLFLESL*KVLTWLGTSTP
Trigger: AGGTGTTGATGTTCCCAGCCACGTTAACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000498706.5
CDS CCA 72 bp ACATCAGTTATCCGTCTGCTTTTTCTTGAGAGCTTGTaGAAGGTGTTAACGTGGCTGGGAACATCACACCTT +
Preference number: 6 (lower is better)
Translates to: TSVIRLLFLESL*KVLTWLGTSHL
Trigger: AAGGTGTGATGTTCCCAGCCACGTTAACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422803.2
CDS CAA 72 bp TTCACATCAGTTATCCGTCTGCTTTTTCTTGAGAGCTaGTGGAAGGTGTTAACGTGGCTGGGAACATCACAC +
Preference number: 6 (lower is better)
Translates to: FTSVIRLLFLES*WKVLTWLGTSH
Trigger: GTGTGATGTTCCCAGCCACGTTAACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422803.2
CDS TCA 72 bp GGACTAGGTACAGAGTCTAAATTATACTCAGTGCTATaGGTGCTAAGAGGCTTCCGTCCCTTTGAATCAGCT +
Preference number: 6 (lower is better)
Translates to: GLGTESKLYSVL*VLRGFRPFESA
Trigger: AGCTGATTCAAAGGGACGGAAGCCTCTTAGCACTCATAGCACTGAGTATAATTTAGACTCTGTACCTAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409933.5
ENST00000498706.5
CDS TCA 72 bp CTGGAACTGATCAGATGTACATGTGTTCATATCTGGTaGCATGGTGGCTGTCTGACCGATGGAAGCTATTTT +
Preference number: 6 (lower is better)
Translates to: LELIRCTCVHIW*HGGCLTDGSYF
Trigger: AAAATAGCTTCCATCGGTCAGACAGCCACCATGTCACCAGATATGAACACATGTACATCTGATCAGTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000422803.2
ENST00000487769.2
ENST00000498706.5
CDS CAA 72 bp TCCCCAAATTCATCATCATCATCATCCTCTGCTCCATaGTCTAATGGTGGTGGGGATGAAGAGTACATTCGA +
Preference number: 6 (lower is better)
Translates to: SPNSSSSSSSAP*SNGGGDEEYIR
Trigger: TCGAATGTACTCTTCATCCCCACCACCATTAGACAATGGAGCAGAGGATGATGATGATGATGAATTTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409933.5
ENST00000498706.5
CDS CAA 72 bp TTCACATCAGTTATCCGTCTGCTTTTTCTTGAGAGCTaGTGGAAGGTGTTAACGTGGCTGGGAACATCAACA +
Preference number: 6 (lower is better)
Translates to: FTSVIRLLFLES*WKVLTWLGTST
Trigger: TGTTGATGTTCCCAGCCACGTTAACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGGATAACTGATGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000498706.5
CDS CAA 90 bp CCACCAAATTCCCCAAATTCATCATCATCATCATCCTCTGCTCCATaGTCTAATGGTGGTGGGGATGAAGAGTACATTCGAATGATGTCT +
Preference number: 6 (lower is better)
Translates to: PPNSPNSSSSSSSAP*SNGGGDEEYIRMMS
Trigger: AGACATCATTCGAATGTACTCTTCATCCCCACCACCATTAGACAATGGAGCAGAGGATGATGATGATGATGAATTTGGGGAATTTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409933.5
ENST00000498706.5
CDS TCA 72 bp GAAGACTCTTCAAAAGTGGCATCACTCATTGAATCTTaGGTACCAGTAACAAAAGGTGGAGTTGAGCCACTG +
Preference number: 6 (lower is better)
Translates to: EDSSKVASLIES*VPVTKGGVEPL
Trigger: CAGTGGCTCAACTCCACCTTTTGTTACTGGTACTCAAGATTCAATGAGTGATGCCACTTTTGAAGAGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000498706.5
CDS TCA 72 bp GGTTCCTGGAGTATCAATATTTTCATCTGTCCTATGTaGCTGCCAGGCTTCCTTTCGATGATGAGATTCAGT +
Preference number: 6 (lower is better)
Translates to: GSWSINIFICPM*LPGFLSMMRFS
Trigger: ACTGAATCTCATCATCGAAAGGAAGCCTGGCAGTCACATAGGACAGATGAAAATATTGATACTCCAGGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000487769.2
ENST00000498706.5
CDS CAA 90 bp GTCTTCTCTACTGTAGACATGAGTCTTGCAAATGCATCAGTCACTTaGAGGCTTGAGGTGGAGATTTCCAGCTTAGAAGTTGTTAACTCA +
Preference number: 6 (lower is better)
Translates to: VFSTVDMSLANASVT*RLEVEISSLEVVNS
Trigger: TGAGTTAACAACTTCTAAGCTGGAAATCTCCACCTCAAGCCTCAAAGTGACTGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000422803.2
ENST00000487769.2
ENST00000498706.5
CDS TCA 72 bp TTATCAGCTGAGTCTACCAAACTCCAAGCCTTTGACTaGACACCTGACTGTAAAAATTCATCCTGTTGCAGT +
Preference number: 6 (lower is better)
Translates to: LSAESTKLQAFD*TPDCKNSSCCS
Trigger: ACTGCAACAGGATGAATTTTTACAGTCAGGTGTTCAGTCAAAGGCTTGGAGTTTGGTAGACTCAGCTGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409933.5
ENST00000498706.5
CDS GCA 72 bp CATAATAAAGAATGTCATAACTACCCTACCCTGATGTaGAACCTCAAGCTGTACTGTTCCCCTTTAACTCTG +
Preference number: 6 (lower is better)
Translates to: HNKECHNYPTLM*NLKLYCSPLTL
Trigger: CAGAGTTAAAGGGGAACAGTACAGCTTGAGGTTGCACATCAGGGTAGGGTAGTTATGACATTCTTTATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498706.5
CDS GCA 72 bp CAAAACTGGAAGCCATACCAGAAAGACCGAAAGGAATaGGTACCCGTTAAAGGGAAACAATACTTTAATCTC +
Preference number: 6 (lower is better)
Translates to: QNWKPYQKDRKE*VPVKGKQYFNL
Trigger: GAGATTAAAGTATTGTTTCCCTTTAACGGGTACGCATTCCTTTCGGTCTTTCTGGTATGGCTTCCAGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498706.5
CDS TCA 72 bp AAAAGCATTCCAATCTACAACTTGGCTAGGACCAGCTaGACTGAAGTCTGCAAAATCATCAGAGTCTTGAAA +
Preference number: 6 (lower is better)
Translates to: KSIPIYNLARTS*TEVCKIIRVLK
Trigger: TTTCAAGACTCTGATGATTTTGCAGACTTCAGTTCAGCTGGTCCTAGCCAAGTTGTAGATTGGAATGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000487769.2
ENST00000498706.5
CDS GCA 72 bp TTGTTAGAATCTCCAGACAAGGAGGCTTTTCACCATTaGAGCTCTCTAACTGCTTGTTTTGATGAACAACAT +
Preference number: 6 (lower is better)
Translates to: LLESPDKEAFHH*SSLTACFDEQH
Trigger: ATGTTGTTCATCAAAACAAGCAGTTAGAGAGCTGCAATGGTGAAAAGCCTCCTTGTCTGGAGATTCTAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409933.5
ENST00000498706.5
CDS CAA 90 bp AGAATCATCCAAATCATTTTCTTCTGTGGGGTCAATGTTTGGGCTTaGGAAATTAGTAAACTTTCTACTTTCTTCTTTGGGAGAACCAAC +
Preference number: 6 (lower is better)
Translates to: RIIQIIFFCGVNVWA*EISKLSTFFFGRTN
Trigger: GTTGGTTCTCCCAAAGAAGAAAGTAGAAAGTTTACTAATTTCCAAAGCCCAAACATTGACCCCACAGAAGAAAATGATTTGGATGATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000498706.5
CDS CAA 90 bp TACAATGTAAAGAATGTAACACTTAGTAAGGTTTTAGGAGTTCAGTaGCTTCAATCAAAACTGGAAGCCATACCAGAAAGACCGAAAGGA +
Preference number: 6 (lower is better)
Translates to: YNVKNVTLSKVLGVQ*LQSKLEAIPERPKG
Trigger: TCCTTTCGGTCTTTCTGGTATGGCTTCCAGTTTTGATTGAAGCAACTGAACTCCTAAAACCTTACTAAGTGTTACATTCTTTACATTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498706.5
CDS TCA 72 bp GGTTCAGTGCCTGTTCCACTAGATTTTCTTGCCAATTaGCATTCTTCTGATAAATTATCAGAAGTCTGTTTT +
Preference number: 6 (lower is better)
Translates to: GSVPVPLDFLAN*HSSDKLSEVCF
Trigger: AAAACAGACTTCTGATAATTTATCAGAAGAATGTCAATTGGCAAGAAAATCTAGTGGAACAGGCACTGAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000487769.2
ENST00000498706.5
CDS CAA 72 bp TATCAGAAGTCTGTTTTAGGTCTGACTTTGTTAATATaGTCTCCTCTTGGCAAGAAACAGCATTTATATCCC +
Preference number: 6 (lower is better)
Translates to: YQKSVLGLTLLI*SPLGKKQHLYP
Trigger: GGGATATAAATGCTGTTTCTTGCCAAGAGGAGACAATATTAACAAAGTCAGACCTAAAACAGACTTCTGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000487769.2
ENST00000498706.5
CDS CAA 72 bp AAGAATGTAACACTTAGTAAGGTTTTAGGAGTTCAGTaGCTTCAATCAAAACTGGAAGCCATACCAGAAAGA +
Preference number: 6 (lower is better)
Translates to: KNVTLSKVLGVQ*LQSKLEAIPER
Trigger: TCTTTCTGGTATGGCTTCCAGTTTTGATTGAAGCAACTGAACTCCTAAAACCTTACTAAGTGTTACATTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498706.5
CDS CCA 72 bp ATCATCCAAATCATTTTCTTCTGTGGGGTCAATGTTTaGGCTTTGGAAATTAGTAAACTTTCTACTTTCTTC +
Preference number: 6 (lower is better)
Translates to: IIQIIFFCGVNV*ALEISKLSTFF
Trigger: GAAGAAAGTAGAAAGTTTACTAATTTCCAAAGCCCAAACATTGACCCCACAGAAGAAAATGATTTGGATGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000238855.11
ENST00000238856.8
ENST00000409183.5
ENST00000409933.5
ENST00000498706.5