Pregenerated sensors for AFP (Homo sapiens)
Ensembl gene IDs: ENSG00000081051Ensembl transcript IDs: ENST00000226359.2, ENST00000395792.7, ENST00000506820.1, ENST00000508838.5, ENST00000513720.5, ENST00000514279.5, ENST00000515675.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTTCTCTTCCCCTCTTCAGCAAAGCAGACTTCCTGTTCCTGGCCTTaGCAGCATTTCTCCAACAGGCCTGAGAAATCTGCAATGACAGCC | + |
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Preference number: 5 (lower is better) Translates to: LLFPSSAKQTSCSWP*QHFSNRPEKSAMTA Trigger: GGCTGTCATTGCAGATTTCTCAGGCCTGTTGGAGAAATGCTGCCAAGGCCAGGAACAGGAAGTCTGCTTTGCTGAAGAGGGGAAGAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226359.2 |
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| CDS CCA 90 bp | AGTTTTTGTCCCTCTTCAGCAAAGCAGACTTCCTGTTCCTGGCCTTaGCAGCATTTCTCCAACAGGCCTGAGAAATCTGCAATGACAGCC | + |
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Preference number: 5 (lower is better) Translates to: SFCPSSAKQTSCSWP*QHFSNRPEKSAMTA Trigger: GGCTGTCATTGCAGATTTCTCAGGCCTGTTGGAGAAATGCTGCCAAGGCCAGGAACAGGAAGTCTGCTTTGCTGAAGAGGGACAAAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000395792.7 ENST00000506820.1 ENST00000508838.5 ENST00000514279.5 |
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| CDS GCA 90 bp | TTTTCCCCATCCTGCAGACAATCCAGCACATCTCCTCTGCAACAGTaGTCATGTACATGGGCCACATCCAGGACTAGTTTCTGGATTTCA | + |
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Preference number: 5 (lower is better) Translates to: FSPSCRQSSTSPLQQ*SCTWATSRTSFWIS Trigger: TGAAATCCAGAAACTAGTCCTGGATGTGGCCCATGTACATGAGCACTGTTGCAGAGGAGATGTGCTGGATTGTCTGCAGGATGGGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS CCA 90 bp | CTGCTGAAGCATGGCCTCCTGTTGGCATATGAAGAAGTGCAGCACTaGCCAACACCAGGGTTTACTGGAGTCATTTCATGTCTGATACAT | + |
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Preference number: 5 (lower is better) Translates to: LLKHGLLLAYEEVQH*PTPGFTGVISCLIH Trigger: ATGTATCAGACATGAAATGACTCCAGTAAACCCTGGTGTTGGCCAGTGCTGCACTTCTTCATATGCCAACAGGAGGCCATGCTTCAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000226359.2 ENST00000395792.7 ENST00000508838.5 ENST00000514279.5 |
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| CDS CCA 90 bp | TTTTGTCTTCTCTTCCCCTCTTCAGCAAAGCAGACTTCCTGTTCCTaGCCTTGGCAGCATTTCTCCAACAGGCCTGAGAAATCTGCAATG | + |
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Preference number: 5 (lower is better) Translates to: FCLLFPSSAKQTSCS*PWQHFSNRPEKSAM Trigger: CATTGCAGATTTCTCAGGCCTGTTGGAGAAATGCTGCCAAGGCCAGGAACAGGAAGTCTGCTTTGCTGAAGAGGGGAAGAGAAGACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000226359.2 |
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| CDS TCA 90 bp | CCTGGCCTTGGCAGCATTTCTCCAACAGGCCTGAGAAATCTGCAATaGCAGCCTCAAGTTGTTCCTCTGTTATTTGTGGCTTTTGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: PGLGSISPTGLRNLQ*QPQVVPLLFVAFAS Trigger: TGAAGCAAAAGCCACAAATAACAGAGGAACAACTTGAGGCTGTCATTGCAGATTTCTCAGGCCTGTTGGAGAAATGCTGCCAAGGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000226359.2 ENST00000395792.7 ENST00000506820.1 ENST00000508838.5 ENST00000514279.5 |
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| CDS CCA 90 bp | GAAATCAGTTTTTGTCCCTCTTCAGCAAAGCAGACTTCCTGTTCCTaGCCTTGGCAGCATTTCTCCAACAGGCCTGAGAAATCTGCAATG | + |
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Preference number: 5 (lower is better) Translates to: EISFCPSSAKQTSCS*PWQHFSNRPEKSAM Trigger: CATTGCAGATTTCTCAGGCCTGTTGGAGAAATGCTGCCAAGGCCAGGAACAGGAAGTCTGCTTTGCTGAAGAGGGACAAAAACTGATTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000395792.7 ENST00000506820.1 ENST00000508838.5 ENST00000514279.5 |
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| CDS CCA 90 bp | CTGTCTTCTTCATATGCTTCACAGCTTGTGACAGGTTCTGGAACTTaGAAAAGTGGGATCGATGCTGGAGTGGGCTTTTTGTGTGCAAGA | + |
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Preference number: 5 (lower is better) Translates to: LSSSYASQLVTGSGT*KSGIDAGVGFLCAR Trigger: TCTTGCACACAAAAAGCCCACTCCAGCATCGATCCCACTTTTCCAAGTTCCAGAACCTGTCACAAGCTGTGAAGCATATGAAGAAGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS GCA 90 bp | AAACCTTGTCTAGTACTTTCAGTAGAAAGATTGAGGCTGAAAGCATaGCAAGTGTTCCACCAGCCTGGAGTTGTGCAGGTTGTGGATAAA | + |
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Preference number: 5 (lower is better) Translates to: KPCLVLSVERLRLKA*QVFHQPGVVQVVDK Trigger: TTTATCCACAACCTGCACAACTCCAGGCTGGTGGAACACTTGGCATGCTTTCAGCCTCAATCTTTCTACTGAAAGTACTAGACAAGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506820.1 |
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| CDS TCA 90 bp | AGGTTAATGAGAAACTCTTGCTTCATTGTTTGCAGCGCTACACCCTaGGCTTGGCACAGATCCTTATGGAAAATGAACTTGTCATCAGAG | + |
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Preference number: 5 (lower is better) Translates to: RLMRNSCFIVCSATP*AWHRSLWKMNLSSE Trigger: CTCTGATGACAAGTTCATTTTCCATAAGGATCTGTGCCAAGCTCAGGGTGTAGCGCTGCAAACAATGAAGCAAGAGTTTCTCATTAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000226359.2 ENST00000395792.7 ENST00000508838.5 ENST00000514279.5 |
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| CDS GCA 90 bp | CTGTTGCTGCCTTTGTTTGGAAGCATTCAACTGCATTTTCAGCTTTaGAGCAAGATGGAATTATTTTGTCATAGCGAGCAGCCCAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: LLLPLFGSIQLHFQL*SKMELFCHSEQPKE Trigger: TTCTTTGGGCTGCTCGCTATGACAAAATAATTCCATCTTGCTGCAAAGCTGAAAATGCAGTTGAATGCTTCCAAACAAAGGCAGCAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS CCA 90 bp | CAGGTAGCTGGTTTTCTAAACACCCTGAAGACTGTTCATCTCCAGTaGGTTTCTCAATTGCAGTCAATGCATCTTTCACCATTTTGCTTA | + |
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Preference number: 5 (lower is better) Translates to: QVAGFLNTLKTVHLQ*VSQLQSMHLSPFCL Trigger: TAAGCAAAATGGTGAAAGATGCATTGACTGCAATTGAGAAACCCACTGGAGATGAACAGTCTTCAGGGTGTTTAGAAAACCAGCTACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS TCA 90 bp | AAGAAAACAGTTATGTCTTCCCTCTTCACTTTGGCTGCAGCAGTCTaGATGTCCGTACTTCTCCAAAATTTCTTTCTCATGGCAAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: KKTVMSSLFTLAAAV*MSVLLQNFFLMAKF Trigger: GAACTTTGCCATGAGAAAGAAATTTTGGAGAAGTACGGACATTCAGACTGCTGCAGCCAAAGTGAAGAGGGAAGACATAACTGTTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS GCA 90 bp | CTCCAGTGGGTTTCTCAATTGCAGTCAATGCATCTTTCACCATTTTaGTTACTTCCTTGTAAGTGGCTTCTTGAACAAACTGGGCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: LQWVSQLQSMHLSPF*LLPCKWLLEQTGQK Trigger: TTTTTGCCCAGTTTGTTCAAGAAGCCACTTACAAGGAAGTAAGCAAAATGGTGAAAGATGCATTGACTGCAATTGAGAAACCCACTGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS GCA 90 bp | CTCATAAATGAATTTGTTCATGAATGTCTCCCTGTCTTCTTCATATaGTTCACAGCTTGTGACAGGTTCTGGAACTTGGAAAAGTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: LINEFVHECLPVFFI*FTACDRFWNLEKWD Trigger: ATCCCACTTTTCCAAGTTCCAGAACCTGTCACAAGCTGTGAAGCATATGAAGAAGACAGGGAGACATTCATGAACAAATTCATTTATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS GCA 90 bp | TTTCTGCATGAATTATACATTGACCACGTTCCAGCGTGGTCAGTTTaGAGCATTCTGTTATTTTGTTTGACAGAGTGTCTTGTTGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: FLHELYIDHVPAWSV*SILLFCLTECLVEN Trigger: GTTCTCAACAAGACACTCTGTCAAACAAAATAACAGAATGCTGCAAACTGACCACGCTGGAACGTGGTCAATGTATAATTCATGCAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS GCA 90 bp | CCATCCTTGTCTATCCGTTTGGATTCCAGGATAGTATTTACAAAGTaGAGTTCTTCTACTCTTCCTCAAGGGGGACTTTACTCAAATATA | + |
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Preference number: 5 (lower is better) Translates to: PSLSIRLDSRIVFTK*SSSTLPQGGLYSNI Trigger: TATATTTGAGTAAAGTCCCCCTTGAGGAAGAGTAGAAGAACTGCACTTTGTAAATACTATCCTGGAATCCAAACGGATAGACAAGGATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000515675.1 |
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| CDS GCA 90 bp | TGGAATTATTTTGTCATAGCGAGCAGCCCAAAGAAGAATTGTAGGTaGATACAGGAAGGGATGCCTTCTTGCTATCTCATAAATGAATTT | + |
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Preference number: 5 (lower is better) Translates to: WNYFVIASSPKKNCR*IQEGMPSCYLINEF Trigger: AAATTCATTTATGAGATAGCAAGAAGGCATCCCTTCCTGTATGCACCTACAATTCTTCTTTGGGCTGCTCGCTATGACAAAATAATTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS CCA 90 bp | AATTCTTCTTCTCCTTTATCTTGGCATTCAAGAGGGTTTTCAGTCTaGAAACACTTCTCCAATAACTCCTGGTATCCTTTAGCAACTCTT | + |
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Preference number: 5 (lower is better) Translates to: NSSSPLSWHSRGFSV*KHFSNNSWYPLATL Trigger: AAGAGTTGCTAAAGGATACCAGGAGTTATTGGAGAAGTGTTTCCAGACTGAAAACCCTCTTGAATGCCAAGATAAAGGAGAAGAAGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS CCA 90 bp | TTTCATCATTTTCTGCATGAATTATACATTGACCACGTTCCAGCGTaGTCAGTTTGCAGCATTCTGTTATTTTGTTTGACAGAGTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: FHHFLHELYIDHVPA*SVCSILLFCLTECL Trigger: AAGACACTCTGTCAAACAAAATAACAGAATGCTGCAAACTGACCACGCTGGAACGTGGTCAATGTATAATTCATGCAGAAAATGATGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS GCA 72 bp | GTCCTCACTGAGTTGGCAACAAGTGGCTGCTGTGGCTaGCATTTTTCTGGTGATGGCCATCAGCTCCGACGA | + |
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Preference number: 6 (lower is better) Translates to: VLTELATSGCCG*HFSGDGHQLRR Trigger: TCGTCGGAGCTGATGGCCATCACCAGAAAAATGGCAGCCACAGCAGCCACTTGTTGCCAACTCAGTGAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000226359.2 ENST00000395792.7 ENST00000508838.5 |
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| CDS CAA 72 bp | ATAATGTCAGCCGCTCCCTCGCCACAGGCCAATAGTTaGTCCTCACTGAGTTGGCAACAAGTGGCTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: IMSAAPSPQANS*SSLSWQQVAAV Trigger: CACAGCAGCCACTTGTTGCCAACTCAGTGAGGACAAACTATTGGCCTGTGGCGAGGGAGCGGCTGACATTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000226359.2 ENST00000395792.7 ENST00000508838.5 |
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| CDS CAA 90 bp | TGTCCGATAATAATGTCAGCCGCTCCCTCGCCACAGGCCAATAGTTaGTCCTCACTGAGTTGGCAACAAGTGGCTGCTGTGGCTGCCATT | + |
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Preference number: 6 (lower is better) Translates to: CPIIMSAAPSPQANS*SSLSWQQVAAVAAI Trigger: AATGGCAGCCACAGCAGCCACTTGTTGCCAACTCAGTGAGGACAAACTATTGGCCTGTGGCGAGGGAGCGGCTGACATTATTATCGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000226359.2 ENST00000395792.7 ENST00000508838.5 |
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| CDS CCA 72 bp | CCCTCTTCAGCAAAGCAGACTTCCTGTTCCTGGCCTTaGCAGCATTTCTCCAACAGGCCTGAGAAATCTGCA | + |
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Preference number: 6 (lower is better) Translates to: PSSAKQTSCSWP*QHFSNRPEKSA Trigger: TGCAGATTTCTCAGGCCTGTTGGAGAAATGCTGCCAAGGCCAGGAACAGGAAGTCTGCTTTGCTGAAGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000226359.2 ENST00000395792.7 ENST00000506820.1 ENST00000508838.5 ENST00000514279.5 |
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| CDS CAA 90 bp | ACATATGTTTCATCCACCACCAAGCTGCTGAAGCATGGCCTCCTGTaGGCATATGAAGAAGTGCAGCACTGGCCAACACCAGGGTTTACT | + |
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Preference number: 6 (lower is better) Translates to: TYVSSTTKLLKHGLL*AYEEVQHWPTPGFT Trigger: AGTAAACCCTGGTGTTGGCCAGTGCTGCACTTCTTCATATGCCAACAGGAGGCCATGCTTCAGCAGCTTGGTGGTGGATGAAACATATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000226359.2 ENST00000395792.7 ENST00000508838.5 ENST00000514279.5 |
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| CDS CCA 72 bp | CATGGCCTCCTGTTGGCATATGAAGAAGTGCAGCACTaGCCAACACCAGGGTTTACTGGAGTCATTTCATGT | + |
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Preference number: 6 (lower is better) Translates to: HGLLLAYEEVQH*PTPGFTGVISC Trigger: ACATGAAATGACTCCAGTAAACCCTGGTGTTGGCCAGTGCTGCACTTCTTCATATGCCAACAGGAGGCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000226359.2 ENST00000395792.7 ENST00000508838.5 ENST00000514279.5 |
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| CDS CCA 72 bp | TTTTGTCCCTCTTCAGCAAAGCAGACTTCCTGTTCCTaGCCTTGGCAGCATTTCTCCAACAGGCCTGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: FCPSSAKQTSCS*PWQHFSNRPEK Trigger: TTTCTCAGGCCTGTTGGAGAAATGCTGCCAAGGCCAGGAACAGGAAGTCTGCTTTGCTGAAGAGGGACAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000395792.7 ENST00000506820.1 ENST00000508838.5 ENST00000514279.5 |
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| CDS CCA 72 bp | TCCAGCACATCTCCTCTGCAACAGTGCTCATGTACATaGGCCACATCCAGGACTAGTTTCTGGATTTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: SSTSPLQQCSCT*ATSRTSFWISV Trigger: TACTGAAATCCAGAAACTAGTCCTGGATGTGGCCCATGTACATGAGCACTGTTGCAGAGGAGATGTGCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS CAA 72 bp | ATTCTCCTAGTTTCTGGAAGAGGCCGCAGCTTCGCTTaGCCAATGCTTGGCTCTCCTGGATGTATTTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: ILLVSGRGRSFA*PMLGSPGCISV Trigger: TACAGAAATACATCCAGGAGAGCCAAGCATTGGCAAAGCGAAGCTGCGGCCTCTTCCAGAAACTAGGAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS CAA 90 bp | CCTGTCTTCTTCATATGCTTCACAGCTTGTGACAGGTTCTGGAACTaGGAAAAGTGGGATCGATGCTGGAGTGGGCTTTTTGTGTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: PVFFICFTACDRFWN*EKWDRCWSGLFVCK Trigger: CTTGCACACAAAAAGCCCACTCCAGCATCGATCCCACTTTTCCAAGTTCCAGAACCTGTCACAAGCTGTGAAGCATATGAAGAAGACAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS TCA 72 bp | GGCAGCATTTCTCCAACAGGCCTGAGAAATCTGCAATaGCAGCCTCAAGTTGTTCCTCTGTTATTTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: GSISPTGLRNLQ*QPQVVPLLFVA Trigger: AGCCACAAATAACAGAGGAACAACTTGAGGCTGTCATTGCAGATTTCTCAGGCCTGTTGGAGAAATGCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000226359.2 ENST00000395792.7 ENST00000506820.1 ENST00000508838.5 ENST00000514279.5 |
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| CDS TCA 72 bp | TATGAAGGAATACCTTGGGCCTGGGGAGAAAGTCAGTaGACCCTGTTGCAAGTTGCCAAGCTTAAAACAAGC | + |
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Preference number: 6 (lower is better) Translates to: YEGIPWAWGESQ*TLLQVAKLKTS Trigger: GCTTGTTTTAAGCTTGGCAACTTGCAACAGGGTTCACTGACTTTCTCCCCAGGCCCAAGGTATTCCTTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515675.1 |
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| CDS CCA 72 bp | TTCTGGAAGAGGCCGCAGCTTCGCTTTGCCAATGCTTaGCTCTCCTGGATGTATTTCTGTAATTCTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: FWKRPQLRFANA*LSWMYFCNSSS Trigger: AGAAGAAGAATTACAGAAATACATCCAGGAGAGCCAAGCATTGGCAAAGCGAAGCTGCGGCCTCTTCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS TCA 72 bp | ATGTCTCCCTGTCTTCTTCATATGCTTCACAGCTTGTaGCAGGTTCTGGAACTTGGAAAAGTGGGATCGATG | + |
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Preference number: 6 (lower is better) Translates to: MSPCLLHMLHSL*QVLELGKVGSM Trigger: CATCGATCCCACTTTTCCAAGTTCCAGAACCTGTCACAAGCTGTGAAGCATATGAAGAAGACAGGGAGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS TCA 72 bp | AACAAGCCCCATAGAACAGATACAACCCAAGTGTTATaGGACAGACATCCTCAAAGTCCTCCAGCCCATAGT | + |
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Preference number: 6 (lower is better) Translates to: NKPHRTDTTQVL*DRHPQSPPAHS Trigger: ACTATGGGCTGGAGGACTTTGAGGATGTCTGTCTCATAACACTTGGGTTGTATCTGTTCTATGGGGCTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000513720.5 ENST00000515675.1 |
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| CDS CAA 72 bp | TTCATATGCTTCACAGCTTGTGACAGGTTCTGGAACTaGGAAAAGTGGGATCGATGCTGGAGTGGGCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: FICFTACDRFWN*EKWDRCWSGLF Trigger: AAAAAGCCCACTCCAGCATCGATCCCACTTTTCCAAGTTCCAGAACCTGTCACAAGCTGTGAAGCATATGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS CAA 72 bp | CTCTTGCTTCATTGTTTGCAGCGCTACACCCTGAGCTaGGCACAGATCCTTATGGAAAATGAACTTGTCATC | + |
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Preference number: 6 (lower is better) Translates to: LLLHCLQRYTLS*AQILMENELVI Trigger: GATGACAAGTTCATTTTCCATAAGGATCTGTGCCAAGCTCAGGGTGTAGCGCTGCAAACAATGAAGCAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000226359.2 ENST00000395792.7 ENST00000508838.5 ENST00000514279.5 |
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| CDS CAA 90 bp | CACAAGGTTAATGAGAAACCTTGTCTAGTACTTTCAGTAGAAAGATaGAGGCTGAAAGCATGCCAAGTGTTCCACCAGCCTGGAGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: HKVNEKPCLVLSVER*RLKACQVFHQPGVV Trigger: CACAACTCCAGGCTGGTGGAACACTTGGCATGCTTTCAGCCTCAATCTTTCTACTGAAAGTACTAGACAAGGTTTCTCATTAACCTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506820.1 |
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| CDS GCA 72 bp | TTTGTCATAGCGAGCAGCCCAAAGAAGAATTGTAGGTaGATACAGGAAGGGATGCCTTCTTGCTATCTCATA | + |
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Preference number: 6 (lower is better) Translates to: FVIASSPKKNCR*IQEGMPSCYLI Trigger: TATGAGATAGCAAGAAGGCATCCCTTCCTGTATGCACCTACAATTCTTCTTTGGGCTGCTCGCTATGACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS CCA 72 bp | TTCTCATGGCAAAGTTCTTCCAGAAAGGCAGGTAGCTaGTTTTCTAAACACCCTGAAGACTGTTCATCTCCA | + |
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Preference number: 6 (lower is better) Translates to: FSWQSSSRKAGS*FSKHPEDCSSP Trigger: TGGAGATGAACAGTCTTCAGGGTGTTTAGAAAACCAGCTACCTGCCTTTCTGGAAGAACTTTGCCATGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS CAA 90 bp | GTAAGTAATATTCTCCTAGTTTCTGGAAGAGGCCGCAGCTTCGCTTaGCCAATGCTTGGCTCTCCTGGATGTATTTCTGTAATTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VSNILLVSGRGRSFA*PMLGSPGCISVILL Trigger: AAGAAGAATTACAGAAATACATCCAGGAGAGCCAAGCATTGGCAAAGCGAAGCTGCGGCCTCTTCCAGAAACTAGGAGAATATTACTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS CAA 90 bp | AATGAGAAACTCTTGCTTCATTGTTTGCAGCGCTACACCCTGAGCTaGGCACAGATCCTTATGGAAAATGAACTTGTCATCAGAGAATGC | + |
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Preference number: 6 (lower is better) Translates to: NEKLLLHCLQRYTLS*AQILMENELVIREC Trigger: GCATTCTCTGATGACAAGTTCATTTTCCATAAGGATCTGTGCCAAGCTCAGGGTGTAGCGCTGCAAACAATGAAGCAAGAGTTTCTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000226359.2 ENST00000395792.7 ENST00000508838.5 ENST00000514279.5 |
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| CDS CCA 72 bp | GGTTTTCTAAACACCCTGAAGACTGTTCATCTCCAGTaGGTTTCTCAATTGCAGTCAATGCATCTTTCACCA | + |
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Preference number: 6 (lower is better) Translates to: GFLNTLKTVHLQ*VSQLQSMHLSP Trigger: TGGTGAAAGATGCATTGACTGCAATTGAGAAACCCACTGGAGATGAACAGTCTTCAGGGTGTTTAGAAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS CAA 72 bp | CTCCAGAAAGAGGTAGCACCATCCTTGTCTATCCGTTaGGATTCCAGGATAGTATTTACAAAGTGCAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LQKEVAPSLSIR*DSRIVFTKCSS Trigger: AGAACTGCACTTTGTAAATACTATCCTGGAATCCAAACGGATAGACAAGGATGGTGCTACCTCTTTCTGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515675.1 |
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| CDS TCA 72 bp | GTTGTGCAGGTTGTGGATAAAACACTATTTCATACTTaGCCATACTTATGTGTAGTGGAAGGCAATCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: VVQVVDKTLFHT*PYLCVVEGNLP Trigger: GGGGAGATTGCCTTCCACTACACATAAGTATGGTCAAGTATGAAATAGTGTTTTATCCACAACCTGCACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506820.1 |
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| CDS GCA 72 bp | TCTATCCGTTTGGATTCCAGGATAGTATTTACAAAGTaGAGTTCTTCTACTCTTCCTCAAGGGGGACTTTAC | + |
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Preference number: 6 (lower is better) Translates to: SIRLDSRIVFTK*SSSTLPQGGLY Trigger: GTAAAGTCCCCCTTGAGGAAGAGTAGAAGAACTGCACTTTGTAAATACTATCCTGGAATCCAAACGGATAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000515675.1 |
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| CDS CAA 72 bp | ACCCTGAAGACTGTTCATCTCCAGTGGGTTTCTCAATaGCAGTCAATGCATCTTTCACCATTTTGCTTACTT | + |
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Preference number: 6 (lower is better) Translates to: TLKTVHLQWVSQ*QSMHLSPFCLL Trigger: AAGTAAGCAAAATGGTGAAAGATGCATTGACTGCAATTGAGAAACCCACTGGAGATGAACAGTCTTCAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS CAA 72 bp | CAATATGGAAGTCTCCAGAAAGAGGTAGCACCATCCTaGTCTATCCGTTTGGATTCCAGGATAGTATTTACA | + |
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Preference number: 6 (lower is better) Translates to: QYGSLQKEVAPS*SIRLDSRIVFT Trigger: TGTAAATACTATCCTGGAATCCAAACGGATAGACAAGGATGGTGCTACCTCTTTCTGGAGACTTCCATATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515675.1 |
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| CDS CAA 90 bp | TATGGAAGTCTCCAGAAAGAGGTAGCACCATCCTTGTCTATCCGTTaGGATTCCAGGATAGTATTTACAAAGTGCAGTTCTTCTACTCTT | + |
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Preference number: 6 (lower is better) Translates to: YGSLQKEVAPSLSIR*DSRIVFTKCSSSTL Trigger: AAGAGTAGAAGAACTGCACTTTGTAAATACTATCCTGGAATCCAAACGGATAGACAAGGATGGTGCTACCTCTTTCTGGAGACTTCCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515675.1 |
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| CDS CAA 90 bp | GTAAGAATCCAATATGGAAGTCTCCAGAAAGAGGTAGCACCATCCTaGTCTATCCGTTTGGATTCCAGGATAGTATTTACAAAGTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: VRIQYGSLQKEVAPS*SIRLDSRIVFTKCS Trigger: ACTGCACTTTGTAAATACTATCCTGGAATCCAAACGGATAGACAAGGATGGTGCTACCTCTTTCTGGAGACTTCCATATTGGATTCTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515675.1 |
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| CDS CAA 90 bp | TTTCTAAACACCCTGAAGACTGTTCATCTCCAGTGGGTTTCTCAATaGCAGTCAATGCATCTTTCACCATTTTGCTTACTTCCTTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: FLNTLKTVHLQWVSQ*QSMHLSPFCLLPCK Trigger: CTTACAAGGAAGTAAGCAAAATGGTGAAAGATGCATTGACTGCAATTGAGAAACCCACTGGAGATGAACAGTCTTCAGGGTGTTTAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS CAA 90 bp | ATCTGCAATGACAGCCTCAAGTTGTTCCTCTGTTATTTGTGGCTTTaGCTTCACAAGGTTAATGAGAAACTCTTGCTTCATTGTTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: ICNDSLKLFLCYLWL*LHKVNEKLLLHCLQ Trigger: CTGCAAACAATGAAGCAAGAGTTTCTCATTAACCTTGTGAAGCAAAAGCCACAAATAACAGAGGAACAACTTGAGGCTGTCATTGCAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000226359.2 ENST00000395792.7 ENST00000508838.5 ENST00000514279.5 |
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| CDS GCA 72 bp | CTGTTCATCTCCAGTGGGTTTCTCAATTGCAGTCAATaGATCTTTCACCATTTTGCTTACTTCCTTGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: LFISSGFLNCSQ*IFHHFAYFLVS Trigger: ACTTACAAGGAAGTAAGCAAAATGGTGAAAGATGCATTGACTGCAATTGAGAAACCCACTGGAGATGAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS GCA 72 bp | GAATTATACATTGACCACGTTCCAGCGTGGTCAGTTTaGAGCATTCTGTTATTTTGTTTGACAGAGTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: ELYIDHVPAWSV*SILLFCLTECL Trigger: AAGACACTCTGTCAAACAAAATAACAGAATGCTGCAAACTGACCACGCTGGAACGTGGTCAATGTATAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS CCA 72 bp | GGGTTTTCAGTCTGGAAACACTTCTCCAATAACTCCTaGTATCCTTTAGCAACTCTTAGAATTACTGAGACA | + |
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Preference number: 6 (lower is better) Translates to: GFSVWKHFSNNS*YPLATLRITET Trigger: TGTCTCAGTAATTCTAAGAGTTGCTAAAGGATACCAGGAGTTATTGGAGAAGTGTTTCCAGACTGAAAACCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS CCA 72 bp | TGCAATGACAGCCTCAAGTTGTTCCTCTGTTATTTGTaGCTTTTGCTTCACAAGGTTAATGAGAAACCTTGT | + |
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Preference number: 6 (lower is better) Translates to: CNDSLKLFLCYL*LLLHKVNEKPC Trigger: ACAAGGTTTCTCATTAACCTTGTGAAGCAAAAGCCACAAATAACAGAGGAACAACTTGAGGCTGTCATTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506820.1 |
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| CDS CAA 72 bp | GACAGCCTCAAGTTGTTCCTCTGTTATTTGTGGCTTTaGCTTCACAAGGTTAATGAGAAACTCTTGCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: DSLKLFLCYLWL*LHKVNEKLLLH Trigger: ATGAAGCAAGAGTTTCTCATTAACCTTGTGAAGCAAAAGCCACAAATAACAGAGGAACAACTTGAGGCTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000226359.2 ENST00000395792.7 ENST00000508838.5 ENST00000514279.5 |
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| CDS CAA 72 bp | GACAGCCTCAAGTTGTTCCTCTGTTATTTGTGGCTTTaGCTTCACAAGGTTAATGAGAAACCTTGTCTAGTA | + |
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Preference number: 6 (lower is better) Translates to: DSLKLFLCYLWL*LHKVNEKPCLV Trigger: TACTAGACAAGGTTTCTCATTAACCTTGTGAAGCAAAAGCCACAAATAACAGAGGAACAACTTGAGGCTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506820.1 |
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| CDS CAA 90 bp | ATCTGCAATGACAGCCTCAAGTTGTTCCTCTGTTATTTGTGGCTTTaGCTTCACAAGGTTAATGAGAAACCTTGTCTAGTACTTTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: ICNDSLKLFLCYLWL*LHKVNEKPCLVLSV Trigger: TACTGAAAGTACTAGACAAGGTTTCTCATTAACCTTGTGAAGCAAAAGCCACAAATAACAGAGGAACAACTTGAGGCTGTCATTGCAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506820.1 |
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| CDS CCA 72 bp | TTTCTGCATGAATTATACATTGACCACGTTCCAGCGTaGTCAGTTTGCAGCATTCTGTTATTTTGTTTGACA | + |
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Preference number: 6 (lower is better) Translates to: FLHELYIDHVPA*SVCSILLFCLT Trigger: TGTCAAACAAAATAACAGAATGCTGCAAACTGACCACGCTGGAACGTGGTCAATGTATAATTCATGCAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS GCA 72 bp | GTTTCTCAATTGCAGTCAATGCATCTTTCACCATTTTaGTTACTTCCTTGTAAGTGGCTTCTTGAACAAACT | + |
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Preference number: 6 (lower is better) Translates to: VSQLQSMHLSPF*LLPCKWLLEQT Trigger: AGTTTGTTCAAGAAGCCACTTACAAGGAAGTAAGCAAAATGGTGAAAGATGCATTGACTGCAATTGAGAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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| CDS CAA 72 bp | TTAGAATTACTGAGACAGCAAGCTGAGGATGTCTTCTaGAATATTCATGAACAAAACTTGCCAAGAAGATAT | + |
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Preference number: 6 (lower is better) Translates to: LELLRQQAEDVF*NIHEQNLPRRY Trigger: ATATCTTCTTGGCAAGTTTTGTTCATGAATATTCAAGAAGACATCCTCAGCTTGCTGTCTCAGTAATTCTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000226359.2 ENST00000395792.7 |
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