Pregenerated sensors for AFF4-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000272023

Ensembl transcript IDs: ENST00000607688.1

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GCAGGCCCTGTACTGCCGTGGCAGCCCTGCCGGACGCGGCCGCAGTaGCCAGAGGCTCAGGCCTATACCGCTCGGGCGGGTCCTTTGCCT	+
Preference number: 5 (lower is better) Translates to: AGPVLPWQPCRTRPQ*PEAQAYTARAGPLP Trigger: AGGCAAAGGACCCGCCCGAGCGGTATAGGCCTGAGCCTCTGGGCACTGCGGCCGCGTCCGGCAGGGCTGCCACGGCAGTACAGGGCCTGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607688.1
CDS GCA 90 bp	ACCTCACTAGCGGGCTACGCGCAGGAGGGCGTGAGCTCCCGGATGTaGAGGCCCTGTACTGCCGTGGCAGCCCTGCCGGACGCGGCCGCA	+
Preference number: 5 (lower is better) Translates to: TSLAGYAQEGVSSRM*RPCTAVAALPDAAA Trigger: TGCGGCCGCGTCCGGCAGGGCTGCCACGGCAGTACAGGGCCTGCACATCCGGGAGCTCACGCCCTCCTGCGCGTAGCCCGCTAGTGAGGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607688.1
CDS TCA 90 bp	ATACCGAACAGCCTCCTGCGTCCTTTGCCTTTTTGCTGGACCTCTTaGGGACTCGAGGCTTCGACACCTGGAAGCAAGTCTAGGAAGCTC	+
Preference number: 5 (lower is better) Translates to: IPNSLLRPLPFCWTS*GLEASTPGSKSRKL Trigger: GAGCTTCCTAGACTTGCTTCCAGGTGTCGAAGCCTCGAGTCCTCAAGAGGTCCAGCAAAAAGGCAAAGGACGCAGGAGGCTGTTCGGTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000607688.1
CDS GCA 72 bp	GGAGGGCGTGAGCTCCCGGATGTGCAGGCCCTGTACTaGCGTGGCAGCCCTGCCGGACGCGGCCGCAGTGCC	+
Preference number: 6 (lower is better) Translates to: GGRELPDVQALY*RGSPAGRGRSA Trigger: GGCACTGCGGCCGCGTCCGGCAGGGCTGCCACGGCAGTACAGGGCCTGCACATCCGGGAGCTCACGCCCTCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607688.1
CDS GCA 72 bp	GTACTGCCGTGGCAGCCCTGCCGGACGCGGCCGCAGTaGCCAGAGGCTCAGGCCTATACCGCTCGGGCGGGT	+
Preference number: 6 (lower is better) Translates to: VLPWQPCRTRPQ*PEAQAYTARAG Trigger: ACCCGCCCGAGCGGTATAGGCCTGAGCCTCTGGGCACTGCGGCCGCGTCCGGCAGGGCTGCCACGGCAGTAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607688.1
CDS GCA 72 bp	GCGGGCTACGCGCAGGAGGGCGTGAGCTCCCGGATGTaGAGGCCCTGTACTGCCGTGGCAGCCCTGCCGGAC	+
Preference number: 6 (lower is better) Translates to: AGYAQEGVSSRM*RPCTAVAALPD Trigger: GTCCGGCAGGGCTGCCACGGCAGTACAGGGCCTGCACATCCGGGAGCTCACGCCCTCCTGCGCGTAGCCCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607688.1
CDS TCA 72 bp	CCAGAGGCGAGGGGCGGAAGGCCTGGGTTTGTCACCTaGGCCCCAGAACCGGCATATCCGGTTCGGCCCGGC	+
Preference number: 6 (lower is better) Translates to: PEARGGRPGFVT*APEPAYPVRPG Trigger: GCCGGGCCGAACCGGATATGCCGGTTCTGGGGCTCAGGTGACAAACCCAGGCCTTCCGCCCCTCGCCTCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607688.1
CDS CAA 72 bp	CCAGAGGCTCAGGCCTATACCGCTCGGGCGGGTCCTTaGCCTGGCCCGGGTCATCAGACCCCACAGCCGGGA	+
Preference number: 6 (lower is better) Translates to: PEAQAYTARAGP*PGPGHQTPQPG Trigger: TCCCGGCTGTGGGGTCTGATGACCCGGGCCAGGCAAAGGACCCGCCCGAGCGGTATAGGCCTGAGCCTCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607688.1
CDS GCA 72 bp	CAGAGGCTCAGGCCTATACCGCTCGGGCGGGTCCTTTaGCTGGCCCGGGTCATCAGACCCCACAGCCGGGAA	+
Preference number: 6 (lower is better) Translates to: QRLRPIPLGRVL*LARVIRPHSRE Trigger: TTCCCGGCTGTGGGGTCTGATGACCCGGGCCAGGCAAAGGACCCGCCCGAGCGGTATAGGCCTGAGCCTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607688.1
CDS CAA 90 bp	GACTCGAGGCTTCGACACCTGGAAGCAAGTCTAGGAAGCTCCGGGTaGGGCCGGATCCCCACCAGAGGCGAGGGGCGGAAGGCCTGGGTT	+
Preference number: 6 (lower is better) Translates to: DSRLRHLEASLGSSG*GRIPTRGEGRKAWV Trigger: AACCCAGGCCTTCCGCCCCTCGCCTCTGGTGGGGATCCGGCCCAACCCGGAGCTTCCTAGACTTGCTTCCAGGTGTCGAAGCCTCGAGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607688.1
CDS CAA 72 bp	CTTCGACACCTGGAAGCAAGTCTAGGAAGCTCCGGGTaGGGCCGGATCCCCACCAGAGGCGAGGGGCGGAAG	+
Preference number: 6 (lower is better) Translates to: LRHLEASLGSSG*GRIPTRGEGRK Trigger: CTTCCGCCCCTCGCCTCTGGTGGGGATCCGGCCCAACCCGGAGCTTCCTAGACTTGCTTCCAGGTGTCGAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607688.1
CDS TCA 72 bp	AGCCTCCTGCGTCCTTTGCCTTTTTGCTGGACCTCTTaGGGACTCGAGGCTTCGACACCTGGAAGCAAGTCT	+
Preference number: 6 (lower is better) Translates to: SLLRPLPFCWTS*GLEASTPGSKS Trigger: AGACTTGCTTCCAGGTGTCGAAGCCTCGAGTCCTCAAGAGGTCCAGCAAAAAGGCAAAGGACGCAGGAGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000607688.1
CDS CAA 72 bp	GGAAATACCGAACAGCCTCCTGCGTCCTTTGCCTTTTaGCTGGACCTCTTGAGGACTCGAGGCTTCGACACC	+
Preference number: 6 (lower is better) Translates to: GNTEQPPASFAF*LDLLRTRGFDT Trigger: GGTGTCGAAGCCTCGAGTCCTCAAGAGGTCCAGCAAAAAGGCAAAGGACGCAGGAGGCTGTTCGGTATTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607688.1
CDS CAA 90 bp	AAGTTTACTGGAAATACCGAACAGCCTCCTGCGTCCTTTGCCTTTTaGCTGGACCTCTTGAGGACTCGAGGCTTCGACACCTGGAAGCAA	+
Preference number: 6 (lower is better) Translates to: KFTGNTEQPPASFAF*LDLLRTRGFDTWKQ Trigger: TTGCTTCCAGGTGTCGAAGCCTCGAGTCCTCAAGAGGTCCAGCAAAAAGGCAAAGGACGCAGGAGGCTGTTCGGTATTTCCAGTAAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607688.1
CDS GCA 72 bp	GTTTACTGGAAATACCGAACAGCCTCCTGCGTCCTTTaGCTTTTTGCTGGACCTCTTGAGGACTCGAGGCTT	+
Preference number: 6 (lower is better) Translates to: VYWKYRTASCVL*LFAGPLEDSRL Trigger: AAGCCTCGAGTCCTCAAGAGGTCCAGCAAAAAGGCAAAGGACGCAGGAGGCTGTTCGGTATTTCCAGTAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000607688.1