RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AFF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000144218

Ensembl transcript IDs: ENST00000317233.8, ENST00000409236.6, ENST00000409579.5, ENST00000415384.2, ENST00000416492.5, ENST00000423966.6, ENST00000424600.5, ENST00000427118.1, ENST00000430789.1, ENST00000432037.5, ENST00000440445.6, ENST00000441400.5, ENST00000445815.2, ENST00000483600.1, ENST00000498090.1, ENST00000671937.1, ENST00000672047.1, ENST00000672197.1, ENST00000672204.1, ENST00000672269.1, ENST00000672756.2, ENST00000672822.1, ENST00000672857.1, ENST00000672999.1, ENST00000673232.1, ENST00000673328.1, ENST00000673529.1, ENST00000683540.1

Found 2146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGTGGGCGCTGTTCCGCAGCCAGTGCAGGCCCTGTTGGGAGTACTaGACCAGGTGCTCCATGCTGCTGTGCAGGGTGACCGGCCCCATG +
Preference number: 1 (lower is better)
Translates to: RWALFRSQCRPCWEY*TRCSMLLCRVTGPM
Trigger: CATGGGGCCGGTCACCCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTCCCAACAGGGCCTGCACTGGCTGCGGAACAGCGCCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR CCA 90 bp CCCTATGACAGGTGGGCGCTGTTCCGCAGCCAGTGCAGGCCCTGTTaGGAGTACTGGACCAGGTGCTCCATGCTGCTGTGCAGGGTGACC +
Preference number: 1 (lower is better)
Translates to: PYDRWALFRSQCRPC*EYWTRCSMLLCRVT
Trigger: GGTCACCCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTCCCAACAGGGCCTGCACTGGCTGCGGAACAGCGCCCACCTGTCATAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR GCA 90 bp TGCAGGCCCTGTTGGGAGTACTGGACCAGGTGCTCCATGCTGCTGTaGAGGGTGACCGGCCCCATGAGCAGATCCAGGTCGTTGAAGAAT +
Preference number: 1 (lower is better)
Translates to: CRPCWEYWTRCSMLL*RVTGPMSRSRSLKN
Trigger: ATTCTTCAACGACCTGGATCTGCTCATGGGGCCGGTCACCCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTCCCAACAGGGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR CCA 90 bp CGAGGCATATCATCGAAGACAAGTTTCTGCCTCTTGCAGTCCCTGTaGCCGTTGGAGCCTGGAGACCACGGCTTCGTCTGCGGCCGTGAC +
Preference number: 1 (lower is better)
Translates to: RGISSKTSFCLLQSL*PLEPGDHGFVCGRD
Trigger: GTCACGGCCGCAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAGGCAGAAACTTGTCTTCGATGATATGCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR TCA 90 bp CCTGTGGCCGTTGGAGCCTGGAGACCACGGCTTCGTCTGCGGCCGTaGCTTGTGGAGGGGAATGTTTTCAGAATTGTTGTGAGCTGCTTT +
Preference number: 1 (lower is better)
Translates to: PVAVGAWRPRLRLRP*LVEGNVFRIVVSCF
Trigger: AAAGCAGCTCACAACAATTCTGAAAACATTCCCCTCCACAAGTCACGGCCGCAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR GCA 90 bp AATCGGCACTGCGAGGCATATCATCGAAGACAAGTTTCTGCCTCTTaGAGTCCCTGTGGCCGTTGGAGCCTGGAGACCACGGCTTCGTCT +
Preference number: 1 (lower is better)
Translates to: NRHCEAYHRRQVSAS*SPCGRWSLETTASS
Trigger: AGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAGGCAGAAACTTGTCTTCGATGATATGCCTCGCAGTGCCGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR TCA 90 bp AGCGGCATCCCAGGGCTACTGGTTGAACAGGAACCCTGTGGCCATTaGGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACTGGGACAC +
Preference number: 1 (lower is better)
Translates to: SGIPGLLVEQEPCGH*DDLLKLPVEPSLGH
Trigger: GTGTCCCAGTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCTGTTCAACCAGTAGCCCTGGGATGCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR TCA 90 bp TGCTGGGCTTTAAGCCAGTTGATACCACAGTGGCTGGCGCAACTCTaGAGTGTGCATGTTCAGAGTCCTGAGTCCCTAGACCCTGGGCAT +
Preference number: 1 (lower is better)
Translates to: CWALSQLIPQWLAQL*SVHVQSPESLDPGH
Trigger: ATGCCCAGGGTCTAGGGACTCAGGACTCTGAACATGCACACTTCAGAGTTGCGCCAGCCACTGTGGTATCAACTGGCTTAAAGCCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CCA 90 bp TCAGTGGTTGGTGAAGCAAAGCCAAGTTCCTGTCCCACCCATCTCTaGGATGAGGAGTTCTCCATGGTGACCCTGAGTCAGGCTTCTTCT +
Preference number: 1 (lower is better)
Translates to: SVVGEAKPSSCPTHL*DEEFSMVTLSQASS
Trigger: AGAAGAAGCCTGACTCAGGGTCACCATGGAGAACTCCTCATCCCAGAGATGGGTGGGACAGGAACTTGGCTTTGCTTCACCAACCACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR GCA 90 bp GAGTTCTCCATGGTGACCCTGAGTCAGGCTTCTTCTGCACCCCTCTaGCTGGTTAATGAGGACTCAACTGAACTGCCCATCTGCAAACAA +
Preference number: 1 (lower is better)
Translates to: EFSMVTLSQASSAPL*LVNEDSTELPICKQ
Trigger: TTGTTTGCAGATGGGCAGTTCAGTTGAGTCCTCATTAACCAGGCAGAGGGGTGCAGAAGAAGCCTGACTCAGGGTCACCATGGAGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR TCA 90 bp CCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATaGAACAAGACAGTCATAAGAACTACACGCTCTGACCACTGCCCA +
Preference number: 1 (lower is better)
Translates to: PQKLLYQRAPHVLHR*NKTVIRTTRSDHCP
Trigger: TGGGCAGTGGTCAGAGCGTGTAGTTCTTATGACTGTCTTGTTTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR TCA 90 bp TCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTGCTTaGTCCTACTTGACTCCAGGCCCTTCCTGCTGGGCTTTAAGCCAG +
Preference number: 1 (lower is better)
Translates to: SSCTEETFHFSTTFA*SYLTPGPSCWALSQ
Trigger: CTGGCTTAAAGCCCAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR GCA 90 bp CATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATaGATGTGGCTGGTGGGCTTGTTATCACAGGTGCAGAAAACTTCA +
Preference number: 1 (lower is better)
Translates to: HVALQPPSHSGRKKK*MWLVGLLSQVQKTS
Trigger: TGAAGTTTTCTGCACCTGTGATAACAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CCA 90 bp GCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTaGCTGGTGGGCTTGTTATCACAGGTGCAGAAAACTTCAACTCCT +
Preference number: 1 (lower is better)
Translates to: ALQPPSHSGRKKKCM*LVGLLSQVQKTSTP
Trigger: AGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CCA 90 bp GCAAGGTGTAAACATACCAGACACACAGGACACAGGAAGAGGCTCTaGTTGCTGCTGCCCCAGAAAGGAACTGTGATCTTCTGCATTGCA +
Preference number: 1 (lower is better)
Translates to: ARCKHTRHTGHRKRL*LLLPQKGTVIFCIA
Trigger: TGCAATGCAGAAGATCACAGTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTGGTATGTTTACACCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 90 bp CAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTaGTTGATCCTACTTGACTCCAGGCCCTTCCTGCTGGGCTTTAAG +
Preference number: 1 (lower is better)
Translates to: QFFLHRGNLPFLHNV*LILLDSRPFLLGFK
Trigger: CTTAAAGCCCAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CCA 90 bp AGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCTGGTaGGCTTGTTATCACAGGTGCAGAAAACTTCAACTCCTAACTGAG +
Preference number: 1 (lower is better)
Translates to: SHRVTVAGRRNACGW*ACYHRCRKLQLLTE
Trigger: CTCAGTTAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CCA 90 bp CCACTGCCCACAACGGTAAGTTTCAAGAAGTTTTCCTGGGAAATGTaGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAA +
Preference number: 1 (lower is better)
Translates to: PLPTTVSFKKFSWEM*AIRVLIKHCWPTCQ
Trigger: TTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCCCAGGAAAACTTCTTGAAACTTACCGTTGTGGGCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR TCA 90 bp TTCAAACAAGCCAACTTCCTAATTACAATGGAGAGGGAACTGGCATaGGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGC +
Preference number: 1 (lower is better)
Translates to: FKQANFLITMERELA*GSKLFPPFRQWAPG
Trigger: GCCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCCCTCTCCATTGTAATTAGGAAGTTGGCTTGTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR GCA 90 bp TTAACTTTCAAAGACGCCGCGTTTTTGCTAAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGGGCTGGGAAGGGCTGTGAGTGTCCA +
Preference number: 1 (lower is better)
Translates to: LTFKDAAFLLNLSAI*ILLGGGAGKGCECP
Trigger: TGGACACTCACAGCCCTTCCCAGCCCCACCTCCAAGTAGTATGCAAATGGCACTGAGATTTAGCAAAAACGCGGCGTCTTTGAAAGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 90 bp GCAGGAAGAAGAAATGCATGTGGCTGGTGGGCTTGTTATCACAGGTaGAGAAAACTTCAACTCCTAACTGAGCTCCAACACACAGGCACT +
Preference number: 1 (lower is better)
Translates to: AGRRNACGWWACYHR*RKLQLLTELQHTGT
Trigger: AGTGCCTGTGTGTTGGAGCTCAGTTAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGCCCACCAGCCACATGCATTTCTTCTTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 90 bp TCTGCAACTTTCAAGGTGGGCAGGACCAGAGAAGCTCTCCAGGTATaGAGGATAGACCTCCAGGGCCATCCCTTTATGTGTTTGAATATT +
Preference number: 1 (lower is better)
Translates to: SATFKVGRTREALQV*RIDLQGHPFMCLNI
Trigger: AATATTCAAACACATAAAGGGATGGCCCTGGAGGTCTATCCTGCATACCTGGAGAGCTTCTCTGGTCCTGCCCACCTTGAAAGTTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CCA 90 bp TACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCTaGTGGGCTTGTTATCACAGGTGCAGAAAACTTCAACTCCTAACT +
Preference number: 1 (lower is better)
Translates to: YSHRVTVAGRRNACG*WACYHRCRKLQLLT
Trigger: AGTTAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR TCA 90 bp CAGTGCCATTTGCATACTACTTGGAGGTGGGGCTGGGAAGGGCTGTaGGTGTCCATCTGTTTGCCTGGAATGCATTTAGTTGATAATAGA +
Preference number: 1 (lower is better)
Translates to: QCHLHTTWRWGWEGL*VSICLPGMHLVDNR
Trigger: TCTATTATCAACTAAATGCATTCCAGGCAAACAGATGGACACTCACAGCCCTTCCCAGCCCCACCTCCAAGTAGTATGCAAATGGCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR TCA 90 bp AATAGTCGATTAGTGCTTTTGAATACTTTACAGCGTGGTCCCTTTTaGGTCGAAACATCCGCCAGTACAGGAGGGCCAGGCATCGGTAAC +
Preference number: 1 (lower is better)
Translates to: NSRLVLLNTLQRGPF*VETSASTGGPGIGN
Trigger: GTTACCGATGCCTGGCCCTCCTGTACTGGCGGATGTTTCGACTCAAAAGGGACCACGCTGTAAAGTATTCAAAAGCACTAATCGACTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR GCA 90 bp TCGCCCCCAAATCAAAACGCATCAAAGGGCTGCAGGTGCACATTCTaGATGAGGAGTGAGAGAATCAGCATTATCATGGCAAATAGCTCT +
Preference number: 1 (lower is better)
Translates to: SPPNQNASKGCRCTF*MRSERISIIMANSS
Trigger: AGAGCTATTTGCCATGATAATGCTGATTCTCTCACTCCTCATGCAGAATGTGCACCTGCAGCCCTTTGATGCGTTTTGATTTGGGGGCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 90 bp TTCACAAGCAACAATTGGAGGATGGTTACTAACCAAAATCACCCATaGCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTG +
Preference number: 1 (lower is better)
Translates to: FTSNNWRMVTNQNHP*QTPQKLLYQRAPHV
Trigger: CACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTGATTTTGGTTAGTAACCATCCTCCAATTGTTGCTTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 90 bp CCCAAGTCCCTGATTCAGCTTTTCAGGCTACATCAATACCCCTGGTaGTTCAACACAAATGCTGACCCTTGTACTGACTGGCAATTAGTG +
Preference number: 1 (lower is better)
Translates to: PKSLIQLFRLHQYPW*FNTNADPCTDWQLV
Trigger: CACTAATTGCCAGTCAGTACAAGGGTCAGCATTTGTGTTGAAGCACCAGGGGTATTGATGTAGCCTGAAAAGCTGAATCAGGGACTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR TCA 90 bp GTAAGAAAGCTATTGGTGGAAAGAAAAGACTTGAAACAGATTGGCTaGCAAATGCCATGTGGCTCTACAGCCACCGAGTCACAGTGGCAG +
Preference number: 1 (lower is better)
Translates to: VRKLLVERKDLKQIG*QMPCGSTATESQWQ
Trigger: CTGCCACTGTGACTCGGTGGCTGTAGAGCCACATGGCATTTGTCAGCCAATCTGTTTCAAGTCTTTTCTTTCCACCAATAGCTTTCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR TCA 90 bp CGTGCTCCACAGATGAAACAAGACAGTCATAAGAACTACACGCTCTaGCCACTGCCCACAACGGTAAGTTTCAAGAAGTTTTCCTGGGAA +
Preference number: 1 (lower is better)
Translates to: RAPQMKQDSHKNYTL*PLPTTVSFKKFSWE
Trigger: TTCCCAGGAAAACTTCTTGAAACTTACCGTTGTGGGCAGTGGTCAGAGCGTGTAGTTCTTATGACTGTCTTGTTTCATCTGTGGAGCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR TCA 90 bp AGACTTCAGCTGTGTAGCAGGCAAAGCTACAGAAGAGAACGTTCTTaGAAGACTGCTGGGTGTTTCTTAGCACAAACCACCTCTGAAAGA +
Preference number: 1 (lower is better)
Translates to: RLQLCSRQSYRRERS*KTAGCFLAQTTSER
Trigger: TCTTTCAGAGGTGGTTTGTGCTAAGAAACACCCAGCAGTCTTTCAAGAACGTTCTCTTCTGTAGCTTTGCCTGCTACACAGCTGAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR GCA 90 bp GGGGCCTTGTTCCATTGCATTTCCACACTCGATAAACGACAATGCTaGTTCAGCATAGTTCAAAGCCTTTCCAAACTTTTCCACCATTGC +
Preference number: 1 (lower is better)
Translates to: GALFHCISTLDKRQC*FSIVQSLSKLFHHC
Trigger: GCAATGGTGGAAAAGTTTGGAAAGGCTTTGAACTATGCTGAAGCAGCATTGTCGTTTATCGAGTGTGGAAATGCAATGGAACAAGGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR CCA 90 bp AAACCCAAGTCCCTGATTCAGCTTTTCAGGCTACATCAATACCCCTaGTGCTTCAACACAAATGCTGACCCTTGTACTGACTGGCAATTA +
Preference number: 1 (lower is better)
Translates to: KPKSLIQLFRLHQYP*CFNTNADPCTDWQL
Trigger: TAATTGCCAGTCAGTACAAGGGTCAGCATTTGTGTTGAAGCACCAGGGGTATTGATGTAGCCTGAAAAGCTGAATCAGGGACTTGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR GCA 90 bp AAGACTAAAAATGAAGTTAACAAACTTACCCTCCCACATAGGGGATaGTTCATGTCAAGCCACTGGTCTAATGCCTCCGTCTTCTTTAGT +
Preference number: 1 (lower is better)
Translates to: KTKNEVNKLTLPHRG*FMSSHWSNASVFFS
Trigger: ACTAAAGAAGACGGAGGCATTAGACCAGTGGCTTGACATGAAGCATCCCCTATGTGGGAGGGTAAGTTTGTTAACTTCATTTTTAGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR CCA 90 bp AGATTTTGGTTGAATTTTCTAAGAAGTCACGGTTTAGCACTGGAATaGAATAGAAAGTGTGTGTCTGTGATTGTGTGTGAGTGTACGGTG +
Preference number: 1 (lower is better)
Translates to: RFWLNFLRSHGLALE*NRKCVSVIVCECTV
Trigger: CACCGTACACTCACACACAATCACAGACACACACTTTCTATTCCATTCCAGTGCTAAACCGTGACTTCTTAGAAAATTCAACCAAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR CCA 90 bp AACATCGTGATAAAGGATAGCATCTATTCAGGTCATGGAAGGATATaGTCAGTTGAACTTGTGTTGAACTTTGGAGGCAAATGTACGTCT +
Preference number: 1 (lower is better)
Translates to: NIVIKDSIYSGHGRI*SVELVLNFGGKCTS
Trigger: AGACGTACATTTGCCTCCAAAGTTCAACACAAGTTCAACTGACCATATCCTTCCATGACCTGAATAGATGCTATCCTTTATCACGATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CCA 90 bp CCAAGCAAACAAGTTAACCCCTTTGGTGACATATACAGAATAATCTaGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCT +
Preference number: 1 (lower is better)
Translates to: PSKQVNPFGDIYRII*TKGTQISSLNISCA
Trigger: AGCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTGTATATGTCACCAAAGGGGTTAACTTGTTTGCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR GCA 90 bp AATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTaGTATTTGCCAGGAAGTTGTAATATTGAAAAACTGTGCTCTTCT +
Preference number: 1 (lower is better)
Translates to: NLDKGNTNLKSEHFL*YLPGSCNIEKLCSS
Trigger: AGAAGAGCACAGTTTTTCAATATTACAACTTCCTGGCAAATAGCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGGGCCCACCTGTCAAATaGGGCTTCACAGGGAAGCTC +
Preference number: 2 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQGPPVK*GFTGKL
Trigger: GAGCTTCCCTGTGAAGCCCCATTTGACAGGTGGGCC...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGACTGCTGTACCAACGTaGTCCACACGTGCTCCACAG +
Preference number: 2 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQTAVPT*STRAPQ
Trigger: CTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGT...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCACAGGGCGCTGGCGTTaGAGAGGCTGCCCTGAGACC +
Preference number: 2 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGTGRWR*RGCPET
Trigger: GGTCTCAGGGCAGCCTCTCCAACGCCAGCGCCCTGT...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR CAA 90 bp ATATCATCGAAGACAAGTTTCTGCCTCTTGCAGTCCCTGTGGCCGTaGGAGCCTGGAGACCACGGCTTCGTCTGCGGCCGTGACTTGTGG +
Preference number: 2 (lower is better)
Translates to: ISSKTSFCLLQSLWP*EPGDHGFVCGRDLW
Trigger: CCACAAGTCACGGCCGCAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAGGCAGAAACTTGTCTTCGATGATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCTTGGTGATGCTGACGTaGTTGGCCGCCATCTGGTGG +
Preference number: 2 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLLVMLT*LAAIWW
Trigger: CCACCAGATGGCGGCCAACCACGTCAGCATCACCAA...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR TCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGATTGGAGAGGCTGCCCTaGGACCCCACGGAGTTTCCA +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGLERLP*DPTEFP
Trigger: TGGAAACTCCGTGGGGTCTCAGGGCAGCCTCTCCAA...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR GCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACCTGTTCCGCAGCCAGTaGAGGCCCTGTTGGGAGTAC +
Preference number: 2 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNLFRSQ*RPCWEY
Trigger: GTACTCCCAACAGGGCCTGCACTGGCTGCGGAACAG...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCTGGTTGGCCGCCATCTaGTGGATGCGCTGTGGGATG +
Preference number: 2 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGWLAAI*WMRCGM
Trigger: CATCCCACAGCGCATCCACCAGATGGCGGCCAACCA...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR TCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATACTCTGGCCCCAGGGTaGGGTCCCTATGACAGGTGG +
Preference number: 2 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYTLAPG*GPYDRW
Trigger: CCACCTGTCATAGGGACCTCACCCTGGGGCCAGAGT...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR GCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGGCAGGAAGAAGAAATaGATGTGGCTGGTGGGCTTG +
Preference number: 2 (lower is better)
Translates to: QTHRTQEEALVAAAPERNGRKKK*MWLVGL
Trigger: CAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGGTGCTGATAAAACACTaGTGGCCCACCTGTCAAATG +
Preference number: 2 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQVLIKH*WPTCQM
Trigger: CATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCAC...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCTGCAGACTGAATGCTaGTGCATCCCAGGGCTCAGA +
Preference number: 2 (lower is better)
Translates to: PGRVPLGDHSSSCTEETFLQTEC*CIPGLR
Trigger: TCTGAGCCCTGGGATGCAGCAGCATTCAGTCTGCAG...GAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR TCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACAGTGTCCAAAAACGTTaGGCCATCTGTGGAGACCAG +
Preference number: 2 (lower is better)
Translates to: QTHRTQEEALVAAAPERNSVQKR*AICGDQ
Trigger: CTGGTCTCCACAGATGGCTCAACGTTTTTGGACACT...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCAGTGTCCAAAAACGTTaGGCCATCTGTGGAGACCAG +
Preference number: 2 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLSVQKR*AICGDQ
Trigger: CTGGTCTCCACAGATGGCTCAACGTTTTTGGACACT...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCACTTCAACTCCTAACTaGGCTCCAACACACAGGCAC +
Preference number: 2 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLTSTPN*APTHRH
Trigger: GTGCCTGTGTGTTGGAGCTCAGTTAGGAGTTGAAGT...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp GGGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGTTGCTTGATCCTACTTaGCTCCAGGCCCTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: GNWHEEASYFHHSGSGLQLLDPT*LQALPA
Trigger: AGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAA...CTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR TCA 90 bp GGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGTCCCAGATGAAGAGCTaGTTCCTTCCCAGGAGCATC +
Preference number: 2 (lower is better)
Translates to: GTGMRKQVISTIPAVGSRSQMKS*FLPRSI
Trigger: GATGCTCCTGGGAAGGAATCAGCTCTTCATCTGGGA...CCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR TCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGACAGCGTGGTCCCTTTTaGGTCGAAACATCCGCCAGT +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGQRGPF*VETSAS
Trigger: ACTGGCGGATGTTTCGACTCAAAAGGGACCACGCTG...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR GCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAACCAAAATCACCCATaGCAAACCCCACAGAAACTG +
Preference number: 2 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQNQNHP*QTPQKL
Trigger: CAGTTTCTGTGGGGTTTGGCATGGGTGATTTTGGTT...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CCCTTCCTGCTGGGCTTTAAGCCAGTTGATACCACAGTGGCTGGCGCAACTCTGGAAAATGCTCTGAAGTaGTGGTCTTGGCCAGGCAAG +
Preference number: 2 (lower is better)
Translates to: PFLLGFKPVDTTVAGATLENALK*WSWPGK
Trigger: CTTGCCTGGCCAAGACCAGCACTTCAGAGCATTTTC...CAGAGTTGCGCCAGCCACTGTGGTATCAACTGGCTTAAAGCCCAGCAGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR GCA 90 bp TTTCTCCACAACGTTTGCTTGATCCTACTTGACTCCAGGCCCTTCCTGCTGGGCCATCTGCAGACTGAATaGTGCTGCATCCCAGGGCTC +
Preference number: 2 (lower is better)
Translates to: FLHNVCLILLDSRPFLLGHLQTE*CCIPGL
Trigger: GAGCCCTGGGATGCAGCAGCATTCAGTCTGCAGATG...GCCCAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACACGTTGAGCCATCTGTaGAGACCAGAGCCCACTCTG +
Preference number: 2 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNTLSHL*RPEPTL
Trigger: CAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGT...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTGGTTTAGCACTGGAATaGAATAGAAAGTGTGTGTCT +
Preference number: 2 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGGLALE*NRKCVS
Trigger: AGACACACACTTTCTATTCCATTCCAGTGCTAAACC...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp TTTCTCCACAACGTTTGCTTGATCCTACTTGACTCCAGGCCCTTCCTGCTGGGCTGGCTGGCGCAACTCTaGAGTGTGCATGTTCAGAGT +
Preference number: 2 (lower is better)
Translates to: FLHNVCLILLDSRPFLLGWLAQL*SVHVQS
Trigger: ACTCTGAACATGCACACTTCAGAGTTGCGCCAGCCA...GCCCAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR GCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACAGATTGGCTGACAAATaGCATGTGGCTCTACAGCCA +
Preference number: 2 (lower is better)
Translates to: QTHRTQEEALVAAAPERNRLADK*HVALQP
Trigger: TGGCTGTAGAGCCACATGGCATTTGTCAGCCAATCT...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAGAAGCTCTCCAGGTATaGAGGATAGACCTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEEALQV*RIDLQG
Trigger: GCCCTGGAGGTCTATCCTGCATACCTGGAGAGCTTC...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGACATTTGCATACTACTTaGAGGTGGGGCTGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGHLHTT*RWGWEG
Trigger: CCCTTCCCAGCCCCACCTCCAAGTAGTATGCAAATG...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTTTCACAAGCAACAATTaGAGGATGGTTACTAACCAA +
Preference number: 2 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGFTSNN*RMVTNQ
Trigger: TTGGTTAGTAACCATCCTCCAATTGTTGCTTGTGAA...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCACAACACAGGGTTTCAATaGTCAGTGGAGCTGAGACAG +
Preference number: 2 (lower is better)
Translates to: GGLRTLTIMAEGEGEARHNTGFQ*SVELRQ
Trigger: CTGTCTCAGCTCCACTGACCATTGAAACCCTGTGTT...GTGCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
3UTR-3UTR CCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCTGGTGGATGCGCTGTaGGATGCTGACGATGGTCGA +
Preference number: 2 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYLVDAL*DADDGR
Trigger: TCGACCATCGTCAGCATCCCACAGCGCATCCACCAG...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR TCA 90 bp GGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGTCTATGAAAATGCTCTaGAGTGCTGGTCTTGGCCAG +
Preference number: 2 (lower is better)
Translates to: GTGMRKQVISTIPAVGSRSMKML*SAGLGQ
Trigger: CTGGCCAAGACCAGCACTTCAGAGCATTTTCATAGA...CCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGCAGGAAGAAGAAATaGATGTGGCTGGTGGGCTTG +
Preference number: 2 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQGRKKK*MWLVGL
Trigger: CAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCC...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATAGAGGCTCTGGTTGCTaGTGCCCCAGAAAGGAACTG +
Preference number: 2 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYRGSGC*CPRKEL
Trigger: CAGTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCT...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAACATATTACACCGCCTaGCTTTCTCAGACCGTCCTG +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGTYYTA*LSQTVL
Trigger: CAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAACGTTGAGCCATCTGTaGAGACCAGAGCCCACTCTG +
Preference number: 2 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKTLSHL*RPEPTL
Trigger: CAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGT...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCCTTCTGGTGTGGCATTaGGGCCTGAGTGGGTTTTTA +
Preference number: 2 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGLLVWH*GLSGFL
Trigger: TAAAAACCCACTCAGGCCCCAATGCCACACCAGAAG...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR TCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGTGTCCAAAAACGTTaGGCCATCTGTGGAGACCAG +
Preference number: 2 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETSVQKR*AICGDQ
Trigger: CTGGTCTCCACAGATGGCTCAACGTTTTTGGACACT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAGGCGGGACAATCACTTaGACCCAGGAGGCAGAGGAT +
Preference number: 2 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVGGTIT*TQEAED
Trigger: ATCCTCTGCCTCCTGGGTTCAAGTGATTGTCCCGCC...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAGGAACTGTGATCTTCTaGATTGCAAGCAGCCTGCTA +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGGTVIF*IASSLL
Trigger: TAGCAGGCTGCTTGCAATGCAGAAGATCACAGTTCC...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTCCAGGAGGCAGAGGATaGAGTGAGCCGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIPGGRG*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCATCCTCTGCCTCCTGG...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGCCAGGAGGCAGAGGATaGAGTGAGCCGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQPGGRG*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCATCCTCTGCCTCCTGG...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAAGAAATGCATGTGGCTaGTGGGCTTGTTATCACAGG +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGRNACG*WACYHR
Trigger: CCTGTGATAACAAGCCCACCAGCCACATGCATTTCT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACAGACTTGAAACAGATTaGCTGACAAATGCCATGTGG +
Preference number: 2 (lower is better)
Translates to: QTHRTQEEALVAAAPERNRLETD*LTNAMW
Trigger: CCACATGGCATTTGTCAGCCAATCTGTTTCAAGTCT...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGAATCAGCATTATCATaGCAAATAGCTCTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLESALS*QIALSL
Trigger: CAGGCTGAGAGCTATTTGCCATGATAATGCTGATTC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATGGCCCACCTGTCAAATaGGGCTTCACAGGGAAGCTC +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHGPPVK*GFTGKL
Trigger: GAGCTTCCCTGTGAAGCCCCATTTGACAGGTGGGCC...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp AACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGCTCTGAGTCATGGGGAGTaGTCTTTGGGCTTTTCTCAA +
Preference number: 2 (lower is better)
Translates to: NWHEEASYFHHSGSGLQALSHGE*SLGFSQ
Trigger: TTGAGAAAAGCCCAAAGACCACTCCCCATGACTCAG...AGCCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR CCA 90 bp TTTCAAACAAGCCAACTTCCTAATTACAATGGAGAGGGAACTGGCATGAGGAAGCCACCATTCCGGCAGTaGGCTCCAGGCTCCCAGATG +
Preference number: 2 (lower is better)
Translates to: FQTSQLPNYNGEGTGMRKPPFRQ*APGSQM
Trigger: CATCTGGGAGCCTGGAGCCCACTGCCGGAATGGTGG...CTTCCTCATGCCAGTTCCCTCTCCATTGTAATTAGGAAGTTGGCTTGTTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CAA 90 bp TTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTGCTaGATCCTACTTGACTCCAGGCCCTTCCTGCTGGGCTTTAAGCCA +
Preference number: 2 (lower is better)
Translates to: FFLHRGNLPFLHNVC*ILLDSRPFLLGFKP
Trigger: TGGCTTAAAGCCCAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR TCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGGGCGGGACAATCACTTaGACCCAGGAGGCAGAGGAT +
Preference number: 2 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQGGTIT*TQEAED
Trigger: ATCCTCTGCCTCCTGGGTTCAAGTGATTGTCCCGCC...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGCTTGTTATCACAGGTaGAGAAAACTTCAACTCCTA +
Preference number: 2 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLACYHR*RKLQLL
Trigger: TAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGAACGCATCAAAGGGCTaGAGGTGCACATTCTGCATG +
Preference number: 2 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRNASKG*RCTFCM
Trigger: CATGCAGAATGTGCACCTGCAGCCCTTTGATGCGTT...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAGGAACTGTGATCTTCTaGATTGCAAGCAGCCTGCTA +
Preference number: 2 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEGTVIF*IASSLL
Trigger: TAGCAGGCTGCTTGCAATGCAGAAGATCACAGTTCC...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCTCTGGTTGCTaGTGCCCCAGAAAGGAACTG +
Preference number: 2 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVRGSGC*CPRKEL
Trigger: CAGTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCT...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAGTGCTGATAAAACACTaGTGGCCCACCTGTCAAATG +
Preference number: 2 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEVLIKH*WPTCQM
Trigger: CATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCAC...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCTTTCTCCACAACGTTTaGTTGATCCTACTTGACTCC +
Preference number: 2 (lower is better)
Translates to: PGRVPLGDHSSSCTEETFFLHNV*LILLDS
Trigger: GGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAA...GAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACGTTGAGCCATCTGTaGAGACCAGAGCCCACTCTG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLITLSHL*RPEPTL
Trigger: CAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGT...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACCAGGTCCATCTTCACTaGCAGTCAAGCTTTTGGTGT +
Preference number: 2 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHQVHLH*QSSFWC
Trigger: ACACCAAAAGCTTGACTGCCAGTGAAGATGGACCTG...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR CCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATAATGCATGTGGCTGGTaGGCTTGTTATCACAGGTGC +
Preference number: 2 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYNACGW*ACYHRC
Trigger: GCACCTGTGATAACAAGCCCACCAGCCACATGCATT...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACCTGACAAATGCCATGTaGCTCTACAGCCACCGAGTC +
Preference number: 2 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNLTNAM*LYSHRV
Trigger: GACTCGGTGGCTGTAGAGCCACATGGCATTTGTCAG...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTGTGGCCGTTGGAGCCTaGAGACCACGGCTTCGTCTG +
Preference number: 2 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLVAVGA*RPRLRL
Trigger: CAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCAC...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAGTTTGTCTTCTGGTGTaGCATTGGGGCCTGAGTGGG +
Preference number: 2 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVVCLLV*HWGLSG
Trigger: CCCACTCAGGCCCCAATGCCACACCAGAAGACAAAC...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR TCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACAGTGTCCAAAAACGTTaGGCCATCTGTGGAGACCAG +
Preference number: 2 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNSVQKR*AICGDQ
Trigger: CTGGTCTCCACAGATGGCTCAACGTTTTTGGACACT...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp GCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGAATATTTACAGAAGAGCATGTTCAGAGTCCTaGGTCCCTAGACCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: ANCEGSDSRASGRNIYRRACSES*VPRPWA
Trigger: TGCCCAGGGTCTAGGGACTCAGGACTCTGAACATGC...TCTTCTGTAAATATTCCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR TCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGATTGGGCGGCTTTAGATaGGTTCTTGAAATAGTCGAT +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGLGGFR*VLEIVD
Trigger: ATCGACTATTTCAAGAACTCATCTAAAGCCGCCCAA...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR GCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCAAACACACATGCCCTaGAAAAGATCATTGTTCAAT +
Preference number: 2 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLQTHMP*KRSLFN
Trigger: ATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTG...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTGGAAGAGGCTCTGGTTaGTGCTGCCCCAGAAAGGAA +
Preference number: 2 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIGRGSG*CCPRKE
Trigger: TTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCC...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCGGGGCCTTGTTCCATTaGATTTCCACACTCGATAAA +
Preference number: 2 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETGALFH*ISTLDK
Trigger: TTTATCGAGTGTGGAAATGCAATGGAACAAGGCCCC...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGACATTTGCATACTACTTaGAGGTGGGGCTGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: VRESALSWQIALSLVSEGHLHTT*RWGWEG
Trigger: CCCTTCCCAGCCCCACCTCCAAGTAGTATGCAAATG...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAAAGAAGAAATGCATGTaGCTGGTGGGCTTGTTATCA +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGKKKCM*LVGLLS
Trigger: TGATAACAAGCCCACCAGCCACATGCATTTCTTCTT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGACTGACAAATGCCATGTaGCTCTACAGCCACCGAGTC +
Preference number: 2 (lower is better)
Translates to: VRESALSWQIALSLVSEGLTNAM*LYSHRV
Trigger: GACTCGGTGGCTGTAGAGCCACATGGCATTTGTCAG...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTACTGACAAATGCCATGTaGCTCTACAGCCACCGAGTC +
Preference number: 2 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVLTNAM*LYSHRV
Trigger: GACTCGGTGGCTGTAGAGCCACATGGCATTTGTCAG...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTACTGCAACTTTCAAGGTaGGCAGGACCAGAGAAGCTC +
Preference number: 2 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVLQLSR*AGPEKL
Trigger: GAGCTTCTCTGGTCCTGCCCACCTTGAAAGTTGCAG...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTCTGATAAAACACTGCTaGCCCACCTGTCAAATGGGG +
Preference number: 2 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTLIKHC*PTCQMG
Trigger: CCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAG...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR CCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCACTCTTGCAGTCCCTGTaGCCGTTGGAGCCTGGAGAC +
Preference number: 2 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRALLQSL*PLEPGD
Trigger: GTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAG...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR TCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 2 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGGCGGGACAATCACTTaGACCCAGGAGGCAGAGGAT +
Preference number: 2 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIGGTIT*TQEAED
Trigger: ATCCTCTGCCTCCTGGGTTCAAGTGATTGTCCCGCC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCCCCAGGGCTACTGGTTaGACAGGAACCCTGTGGCCA +
Preference number: 2 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCPRATG*TGTLWP
Trigger: TGGCCACAGGGTTCCTGTTCAACCAGTAGCCCTGGG...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR TCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGTGCGCTGTGGGATGCTaGCGATGGTCGACGGGGACA +
Preference number: 2 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMCAVGC*RWSTGT
Trigger: TGTCCCCGTCGACCATCGTCAGCATCCCACAGCGCA...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR GCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAGGGTATTTGGTAACATaGAATCTAGTAAACTTCCGG +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGGYLVT*NLVNFR
Trigger: CCGGAAGTTTACTAGATTGCATGTTACCAAATACCC...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACGGGTATTTGGTAACATaGAATCTAGTAAACTTCCGG +
Preference number: 2 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNGYLVT*NLVNFR
Trigger: CCGGAAGTTTACTAGATTGCATGTTACCAAATACCC...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYNLSAI*ILLGGG
Trigger: CCCACCTCCAAGTAGTATGCAAATGGCACTGAGATT...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATTCAAAGGGCTGCAGGTaGACATTCTGCATGAGGAGT +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHSKGCR*TFCMRS
Trigger: ACTCCTCATGCAGAATGTGCACCTGCAGCCCTTTGA...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAATGTGATCTTCTGCATTaGAAGCAGCCTGCTAATCAA +
Preference number: 2 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQCDLLH*KQPANQ
Trigger: TTGATTAGCAGGCTGCTTGCAATGCAGAAGATCACA...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATAAACCCCACAGAAACTaGTGTACCAACGTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHKPHRN*CTNVLH
Trigger: GTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATATTTATGTCCTTGCATTCCCATCTGCGTaGCCTGGTAAGCTTCTCCAA +
Preference number: 2 (lower is better)
Translates to: VVFGLFSKEYTALDIYVLAFPSA*PGKLLQ
Trigger: TTGGAGAAGCTTACCAGGGCACGCAGATGGGAATGC...AAGGACATAAATATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR GCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGGACCACGGCTTCGTCTaGGGCCGTGACTTGTGGAGG +
Preference number: 2 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMDHGFV*GRDLWR
Trigger: CCTCCACAAGTCACGGCCGCAGACGAAGCCGTGGTC...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCAAATGCATGTGGCTGGTaGGCTTGTTATCACAGGTGC +
Preference number: 2 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSNACGW*ACYHRC
Trigger: GCACCTGTGATAACAAGCCCACCAGCCACATGCATT...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTCTGCAACTTTCAAGGTaGGCAGGACCAGAGAAGCTC +
Preference number: 2 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIILQLSR*AGPEKL
Trigger: GAGCTTCTCTGGTCCTGCCCACCTTGAAAGTTGCAG...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCAAAAATTAGCCGGGTGTaGTGGCACGTGCCTATCTTC +
Preference number: 2 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSKISRV*WHVPIF
Trigger: GAAGATAGGCACGTGCCACCACACCCGGCTAATTTT...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAACTTGTGTTGAACTTTaGAGGCAAATGTACGTCTTC +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGTCVEL*RQMYVF
Trigger: GAAGACGTACATTTGCCTCCAAAGTTCAACACAAGT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGAATATTTACAGAAGATTCCCAGGAGCATCCTaGGAGAGTGCCACTAGGAGA +
Preference number: 2 (lower is better)
Translates to: ANCEGSDSRASGRNIYRRFPGAS*ESATRR
Trigger: TCTCCTAGTGGCACTCTCCCAGGATGCTCCTGGGAA...TCTTCTGTAAATATTCCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CAA 90 bp CTTATTTGGAAATGGAAATTTGGTTGGTTCCACTTTGCCAGGTGCTaGAATAGCAGAAAGTGGTGGAAGCCAGGTCATCTCCTGTCGAGG +
Preference number: 2 (lower is better)
Translates to: LIWKWKFGWFHFARC*NSRKWWKPGHLLSR
Trigger: CCTCGACAGGAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTGGAACCAACCAAATTTCCATTTCCAAATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR TCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTACTTCAACTCCTAACTaGGCTCCAACACACAGGCAC +
Preference number: 2 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIITSTPN*APTHRH
Trigger: GTGCCTGTGTGTTGGAGCTCAGTTAGGAGTTGAAGT...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTGATTCAGGCTCCTACTaGAGGGACAATCTAGGTAAT +
Preference number: 2 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTDSGSY*RDNLGN
Trigger: ATTACCTAGATTGTCCCTTCAGTAGGAGCCTGAATC...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR GCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATTTTGGTGTGCTGTATTaGACCTGGTTAACTAACCCA +
Preference number: 2 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYFGVLY*TWLTNP
Trigger: TGGGTTAGTTAACCAGGTGCAATACAGCACACCAAA...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGGTATTTGGTAACATaGAATCTAGTAAACTTCCGG +
Preference number: 2 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQGYLVT*NLVNFR
Trigger: CCGGAAGTTTACTAGATTGCATGTTACCAAATACCC...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCGCTTGTTATCACAGGTaGAGAAAACTTCAACTCCTA +
Preference number: 2 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETACYHR*RKLQLL
Trigger: TAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGC...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAAGATTGGCTGACAAATaGCATGTGGCTCTACAGCCA +
Preference number: 2 (lower is better)
Translates to: VRESALSWQIALSLVSEGRLADK*HVALQP
Trigger: TGGCTGTAGAGCCACATGGCATTTGTCAGCCAATCT...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGAACGCATCAAAGGGCTaGAGGTGCACATTCTGCATG +
Preference number: 2 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQNASKG*RCTFCM
Trigger: CATGCAGAATGTGCACCTGCAGCCCTTTGATGCGTT...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATTGTGATCTTCTGCATTaGAAGCAGCCTGCTAATCAA +
Preference number: 2 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNCDLLH*KQPANQ
Trigger: TTGATTAGCAGGCTGCTTGCAATGCAGAAGATCACA...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAATGGGATTGTGAACTCTaGCAAAAATTAGTGAAAGGG +
Preference number: 2 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEWDCEL*QKLVKG
Trigger: CCCTTTCACTAATTTTTGGCAGAGTTCACAATCCCA...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAGGTTTAGCACTGGAATaGAATAGAAAGTGTGTGTCT +
Preference number: 2 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEGLALE*NRKCVS
Trigger: AGACACACACTTTCTATTCCATTCCAGTGCTAAACC...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATAGAAATGCATGTGGCTaGTGGGCTTGTTATCACAGG +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHRNACG*WACYHR
Trigger: CCTGTGATAACAAGCCCACCAGCCACATGCATTTCT...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGGTAATCACAACACTTTaGGAGGTGGAGGCGGGTAGA +
Preference number: 2 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQVITTL*EVEAGR
Trigger: TCTACCCGCCTCCACCTCCCAAAGTGTTGTGATTAC...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGATTCACAAGCAACAATTaGAGGATGGTTACTAACCAA +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGFTSNN*RMVTNQ
Trigger: TTGGTTAGTAACCATCCTCCAATTGTTGCTTGTGAA...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATGCATTGGGGCCTGAGTaGGTTTTTAGTCTCATAGCA +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHALGPE*VFSLIA
Trigger: TGCTATGAGACTAAAAACCCACTCAGGCCCCAATGC...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR TCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATCTGCTAATCAAAGCCTaGAAAATCGCCCCCAAATCA +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHLLIKA*KIAPKS
Trigger: TGATTTGGGGGCGATTTTTCAGGCTTTGATTAGCAG...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTCCCAGAAAGGAACTGTaGTCTTCTGCATTGCAAGCA +
Preference number: 2 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIPRKEL*SSALQA
Trigger: TGCTTGCAATGCAGAAGATCACAGTTCCTTTCTGGG...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACCCAGAACAACTGACTTaGACGTATTTTGATTCTCAA +
Preference number: 2 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHPEQLT*TYFDSQ
Trigger: TTGAGAATCAAAATACGTTCAAGTCAGTTGTTCTGG...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR TCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGCTTCGTCTGCGGCCGTaGCTTGTGGAGGGGAATGTT +
Preference number: 2 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMLRLRP*LVEGNV
Trigger: AACATTCCCCTCCACAAGTCACGGCCGCAGACGAAG...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR TCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGAGCTCTACTGTTTCTaGATACATCGTATAAGGAGA +
Preference number: 2 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNELYCF*IHRIRR
Trigger: TCTCCTTATACGATGTATTCAGAAACAGTAGAGCTC...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR GCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGTGCAGGTGCACATTCTaGATGAGGAGTGAGAGAATC +
Preference number: 2 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQCRCTF*MRSERI
Trigger: GATTCTCTCACTCCTCATGCAGAATGTGCACCTGCA...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAACGTTGAGCCATCTGTaGAGACCAGAGCCCACTCTG +
Preference number: 2 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSTLSHL*RPEPTL
Trigger: CAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGT...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGAGGAGTACACCGCACTaGATATTTATGTCCTTAGTT +
Preference number: 2 (lower is better)
Translates to: LGDHSSSCTEETFHFSTTRSTPH*IFMSLV
Trigger: AACTAAGGACATAAATATCCAGTGCGGTGTACTCCT...CGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR CCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTCAGTGCAGGCCCTGTTaGGAGTACTGGACCAGGTGC +
Preference number: 2 (lower is better)
Translates to: RISVNVYGSASSLSILCRQCRPC*EYWTRC
Trigger: GCACCTGGTCCAGTACTCCCAACAGGGCCTGCACTG...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR TCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCAGTGTCCAAAAACGTTaGGCCATCTGTGGAGACCAG +
Preference number: 2 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCSVQKR*AICGDQ
Trigger: CTGGTCTCCACAGATGGCTCAACGTTTTTGGACACT...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 2 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCTTGTGTGCAGTTCCCTaGCTGCACACAAGTCAGGGA +
Preference number: 2 (lower is better)
Translates to: PKPWADVISLRTEFIIFLLCAVP*LHTSQG
Trigger: TCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAA...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR GCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTGGGTATTTGGTAACATaGAATCTAGTAAACTTCCGG +
Preference number: 2 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTGYLVT*NLVNFR
Trigger: CCGGAAGTTTACTAGATTGCATGTTACCAAATACCC...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTAAACCCCACAGAAACTaGTGTACCAACGTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIKPHRN*CTNVLH
Trigger: GTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTTGCAGAAAGTCTCATTaGATTGCATTCCATGTGTTC +
Preference number: 2 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTCRKSH*IAFHVF
Trigger: GAACACATGGAATGCAATGCAATGAGACTTTCTGCA...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR GCA 90 bp TTTCAAACAAGCCAACTTCCTAATTACAATGGAGAGGGAACTGGCATGAGGAAGGACCACAGTTCTTCCTaGACAGAGGAAACCTTCCAT +
Preference number: 2 (lower is better)
Translates to: FQTSQLPNYNGEGTGMRKDHSSS*TEETFH
Trigger: ATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTC...CTTCCTCATGCCAGTTCCCTCTCCATTGTAATTAGGAAGTTGGCTTGTTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR CCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAAATGCATGTGGCTGGTaGGCTTGTTATCACAGGTGC +
Preference number: 2 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRANACGW*ACYHRC
Trigger: GCACCTGTGATAACAAGCCCACCAGCCACATGCATT...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCAAGACTTGAAACAGATTaGCTGACAAATGCCATGTGG +
Preference number: 2 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSRLETD*LTNAMW
Trigger: CCACATGGCATTTGTCAGCCAATCTGTTTCAAGTCT...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCTGTCCCACCCATCTCTaGGATGAGGAGTTCTCCATG +
Preference number: 2 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCCPTHL*DEEFSM
Trigger: CATGGAGAACTCCTCATCCCAGAGATGGGTGGGACA...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR CAA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTaGTCTAGCCTGGGATTATGGAAACTAGACAAAGAAGGTGTGTTC +
Preference number: 2 (lower is better)
Translates to: CVCVCTSSSQKPLIT*SSLGLWKLDKEGVF
Trigger: GAACACACCTTCTTTGTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR CAA 90 bp AATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAGGGTATTaGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGG +
Preference number: 2 (lower is better)
Translates to: NRVRWGKGIRGRAGY*VTCNLVNFRHKNTW
Trigger: CCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCCTGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAGTGCCGTCATCACCTTaGAAAAATGGATTGCACCAC +
Preference number: 2 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAVPSSP*KNGLHH
Trigger: GTGGTGCAATCCATTTTTTCAAGGTGATGACGGCAC...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGAAGAACTACACGCTCTaGCCACTGCCCACAACGGTA +
Preference number: 2 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMKNYTL*PLPTTV
Trigger: TACCGTTGTGGGCAGTGGTCAGAGCGTGTAGTTCTT...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCAAAGGATATGGTCAGTTaGACTTGTGTTGAACTTTGG +
Preference number: 2 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSKDMVS*TCVELW
Trigger: CCAAAGTTCAACACAAGTTCAACTGACCATATCCTT...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACCAAACACACATGCCCTaGAAAAGATCATTGTTCAAT +
Preference number: 2 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNQTHMP*KRSLFN
Trigger: ATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTG...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATTGGGATTGTGAACTCTaGCAAAAATTAGTGAAAGGG +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHWDCEL*QKLVKG
Trigger: CCCTTTCACTAATTTTTGGCAGAGTTCACAATCCCA...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp AATGCAGCCAGTTGTTTGTCTTCTGGTGTGGCATTGGGGCCTGAGTGGGTTTTTATTGCATCTGCTTTATaGTTCATTCGTTTAGCTTCT +
Preference number: 2 (lower is better)
Translates to: NAASCLSSGVALGPEWVFIASAL*FIRLAS
Trigger: AGAAGCTAAACGAATGAAGCATAAAGCAGATGCAAT...AAAAACCCACTCAGGCCCCAATGCCACACCAGAAGACAAACAACTGGCTGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR GCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATAAACTTTTCCACCATTaGATCTGCTTTATGCTTCAT +
Preference number: 2 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYKLFHH*ICFMLH
Trigger: ATGAAGCATAAAGCAGATGCAATGGTGGAAAAGTTT...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAGGTTTAGCACTGGAATaGAATAGAAAGTGTGTGTCT +
Preference number: 2 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVGLALE*NRKCVS
Trigger: AGACACACACTTTCTATTCCATTCCAGTGCTAAACC...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGCATTTGCATACTACTTaGAGGTGGGGCTGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMHLHTT*RWGWEG
Trigger: CCCTTCCCAGCCCCACCTCCAAGTAGTATGCAAATG...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATAAGAAGCACCCCAGTTaGAGACATGTAAAATGGAAA +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHKKHPS*RHVKWK
Trigger: TTTCCATTTTACATGTCTCCAACTGGGGTGCTTCTT...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGGTTTCTGACATAGGATaGGATTGTGAACTCTGCCAA +
Preference number: 2 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQVSDIG*DCELCQ
Trigger: TTGGCAGAGTTCACAATCCCATCCTATGTCAGAAAC...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCAGCAACAATTGGAGGATaGTTACTAACCAAAATCACC +
Preference number: 2 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSATIGG*LLTKIT
Trigger: GGTGATTTTGGTTAGTAACCATCCTCCAATTGTTGC...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 2 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCATGGGCTGGATCAGGTaGAGGGATGGTTTTGCTTTT +
Preference number: 2 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCMGWIR*RDGFAF
Trigger: AAAAGCAAAACCATCCCTTCACCTGATCCAGCCCAT...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR GCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTGCTTGTTATCACAGGTaGAGAAAACTTCAACTCCTA +
Preference number: 2 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIACYHR*RKLQLL
Trigger: TAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGC...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTGGCAGGAAGAAGAAATaGATGTGGCTGGTGGGCTTG +
Preference number: 2 (lower is better)
Translates to: RISVNVYGSASSLSILCRGRKKK*MWLVGL
Trigger: CAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCC...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGACATATTACACCGCCTaGCTTTCTCAGACCGTCCTG +
Preference number: 2 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMTYYTA*LSQTVL
Trigger: CAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGAATATTTACAGAAGACCCACTAGAAATGCCTaGATGAGTGAAACATATTCC +
Preference number: 2 (lower is better)
Translates to: ANCEGSDSRASGRNIYRRPTRNA*MSETYS
Trigger: GGAATATGTTTCACTCATGCAGGCATTTCTAGTGGG...TCTTCTGTAAATATTCCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR GCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGCTCGATAAACGACAATaGTGCTTCAGCATAGTTCAA +
Preference number: 2 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQLDKRQ*CFSIVQ
Trigger: TTGAACTATGCTGAAGCAGCATTGTCGTTTATCGAG...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATaGAAACTAGACAAAGAAGGT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLSSLGL*KLDKEG
Trigger: ACCTTCTTTGTCTAGTTTCCATAATCCCAGGCTAGA...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCCAGGTCCATCTTCACTaGCAGTCAAGCTTTTGGTGT +
Preference number: 2 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCQVHLH*QSSFWC
Trigger: ACACCAAAAGCTTGACTGCCAGTGAAGATGGACCTG...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR CCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGGTAATCACAACACTTTaGGAGGTGGAGGCGGGTAGA +
Preference number: 2 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMVITTL*EVEAGR
Trigger: TCTACCCGCCTCCACCTCCCAAAGTGTTGTGATTAC...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATTTCACAAGCAACAATTaGAGGATGGTTACTAACCAA +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHFTSNN*RMVTNQ
Trigger: TTGGTTAGTAACCATCCTCCAATTGTTGCTTGTGAA...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CAA 90 bp CTTTTCCACCATTGCATCTGCTTTATGCTTCATTCGTTTAGCTTCTaGCATAAAATAATCGGCACTGCGAGGCATATCATCGAAGACAAG +
Preference number: 2 (lower is better)
Translates to: LFHHCICFMLHSFSF*HKIIGTARHIIEDK
Trigger: CTTGTCTTCGATGATATGCCTCGCAGTGCCGATTATTTTATGCAAGAAGCTAAACGAATGAAGCATAAAGCAGATGCAATGGTGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCAAACACACATGCCCTaGAAAAGATCATTGTTCAAT +
Preference number: 2 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSQTHMP*KRSLFN
Trigger: ATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTG...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: PKPWADVISLRTEFIIFLNLSAI*ILLGGG
Trigger: CCCACCTCCAAGTAGTATGCAAATGGCACTGAGATT...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR GCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAAGATTGGCTGACAAATaGCATGTGGCTCTACAGCCA +
Preference number: 2 (lower is better)
Translates to: MRISFSAESLIALHSMCSRLADK*HVALQP
Trigger: TGGCTGTAGAGCCACATGGCATTTGTCAGCCAATCT...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATCTTAATATTTCCAAATaGTTGAAGGCCAAAGCCAAA +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHLNISK*LKAKAK
Trigger: TTTGGCTTTGGCCTTCAAGCATTTGGAAATATTAAG...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTTGTTACAACAAAGTCTaGAACTTTCAAGGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: FQMLEGQSQMQIPQALLICYNKV*NFQGGQ
Trigger: CTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACA...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCACAGGTCCATCTTCACTaGCAGTCAAGCTTTTGGTGT +
Preference number: 2 (lower is better)
Translates to: MRISFSAESLIALHSMCSQVHLH*QSSFWC
Trigger: ACACCAAAAGCTTGACTGCCAGTGAAGATGGACCTG...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGAATCAGCATTATCATaGCAAATAGCTCTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIESALS*QIALSL
Trigger: CAGGCTGAGAGCTATTTGCCATGATAATGCTGATTC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCTTTTCCTGGGAAATGTaGGCCATCAGAGTGCTGATA +
Preference number: 2 (lower is better)
Translates to: PKPWADVISLRTEFIIFLFSWEM*AIRVLI
Trigger: TATCAGCACTCTGATGGCCCACATTTCCCAGGAAAA...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR CCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGAAAATTAGCCGGGTGTaGTGGCACGTGCCTATCTTC +
Preference number: 2 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQKISRV*WHVPIF
Trigger: GAAGATAGGCACGTGCCACCACACCCGGCTAATTTT...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGAATATTTACAGAAGAATTTATGTCCTTAGTTaGGTTGGGTTAAGCATTCCC +
Preference number: 2 (lower is better)
Translates to: ANCEGSDSRASGRNIYRRIYVLS*VGLSIP
Trigger: GGGAATGCTTAACCCAACCCAACTAAGGACATAAAT...TCTTCTGTAAATATTCCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR TCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 2 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAGATTCAGGCTCCTACTaGAGGGACAATCTAGGTAAT +
Preference number: 2 (lower is better)
Translates to: MRISFSAESLIALHSMCSDSGSY*RDNLGN
Trigger: ATTACCTAGATTGTCCCTTCAGTAGGAGCCTGAATC...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTCATAGGATGGGATTGTaGACTCTGCCAAAAATTAGT +
Preference number: 2 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIHRMGL*TLPKIS
Trigger: ACTAATTTTTGGCAGAGTTCACAATCCCATCCTATG...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACAAACACACATGCCCTaGAAAAGATCATTGTTCAAT +
Preference number: 2 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKQTHMP*KRSLFN
Trigger: ATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTG...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMNLSAI*ILLGGG
Trigger: CCCACCTCCAAGTAGTATGCAAATGGCACTGAGATT...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGAGATTGGCTGACAAATaGCATGTGGCTCTACAGCCA +
Preference number: 2 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQRLADK*HVALQP
Trigger: TGGCTGTAGAGCCACATGGCATTTGTCAGCCAATCT...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGTGCAGGTGCACATTCTaGATGAGGAGTGAGAGAATC +
Preference number: 2 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQCRCTF*MRSERI
Trigger: GATTCTCTCACTCCTCATGCAGAATGTGCACCTGCA...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCTTCAAGAAGTTTTCCTaGGAAATGTGGGCCATCAGA +
Preference number: 2 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCFKKFS*EMWAIR
Trigger: TCTGATGGCCCACATTTCCCAGGAAAACTTCTTGAA...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR CCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCGGTCATGGAAGGATATaGTCAGTTGAACTTGTGTTG +
Preference number: 2 (lower is better)
Translates to: PKPWADVISLRTEFIIFLGHGRI*SVELVL
Trigger: CAACACAAGTTCAACTGACCATATCCTTCCATGACC...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR TCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 2 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR TCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGGATTCAGGCTCCTACTaGAGGGACAATCTAGGTAAT +
Preference number: 2 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQDSGSY*RDNLGN
Trigger: ATTACCTAGATTGTCCCTTCAGTAGGAGCCTGAATC...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGCTGCTAATCAAAGCCTaGAAAATCGCCCCCAAATCA +
Preference number: 2 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQLLIKA*KIAPKS
Trigger: TGATTTGGGGGCGATTTTTCAGGCTTTGATTAGCAG...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTACATACAAACACACATaGCCTGCAAAAGATCATTGT +
Preference number: 2 (lower is better)
Translates to: FQMLEGQSQMQIPQALLITYKHT*PAKDHC
Trigger: ACAATGATCTTTTGCAGGGCATGTGTGTTTGTATGT...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTTTGGTGTGCTGTATTaGACCTGGTTAACTAACCCA +
Preference number: 2 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYFGVLY*TWLTNP
Trigger: TGGGTTAGTTAACCAGGTGCAATACAGCACACCAAA...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: RISVNVYGSASSLSILCRNLSAI*ILLGGG
Trigger: CCCACCTCCAAGTAGTATGCAAATGGCACTGAGATT...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGAAGAAGAAATGCATGTaGCTGGTGGGCTTGTTATCA +
Preference number: 2 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMKKKCM*LVGLLS
Trigger: TGATAACAAGCCCACCAGCCACATGCATTTCTTCTT...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCGATCAGGAATATACCTaGACTACTCTCTTTCAAAGG +
Preference number: 2 (lower is better)
Translates to: PKPWADVISLRTEFIIFLDQEYT*TTLFQR
Trigger: CCTTTGAAAGAGAGTAGTCCAGGTATATTCCTGATC...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR CAA 90 bp AATTTTGATCAGGAATATACCTGGACTACTCTCTTTCAAAGGCAATaGAACATCGTGATAAAGGATAGCATCTATTCAGGTCATGGAAGG +
Preference number: 2 (lower is better)
Translates to: NFDQEYTWTTLFQRQ*NIVIKDSIYSGHGR
Trigger: CCTTCCATGACCTGAATAGATGCTATCCTTTATCACGATGTTCAATTGCCTTTGAAAGAGAGTAGTCCAGGTATATTCCTGATCAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGAAGAAGAAATGCATGTaGCTGGTGGGCTTGTTATCA +
Preference number: 2 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQKKKCM*LVGLLS
Trigger: TGATAACAAGCCCACCAGCCACATGCATTTCTTCTT...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTTTTGTTTTTAACGTGTaGCAAGATAGACCCTCTTTT +
Preference number: 2 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIFVFNV*QDRPSF
Trigger: AAAAGAGGGTCTATCTTGCCACACGTTAAAAACAAA...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCATTTGTTTTTAACGTGTaGCAAGATAGACCCTCTTTT +
Preference number: 2 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAFVFNV*QDRPSF
Trigger: AAAAGAGGGTCTATCTTGCCACACGTTAAAAACAAA...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAAAGAAGCACCCCAGTTaGAGACATGTAAAATGGAAA +
Preference number: 2 (lower is better)
Translates to: MRISFSAESLIALHSMCSKKHPS*RHVKWK
Trigger: TTTCCATTTTACATGTCTCCAACTGGGGTGCTTCTT...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAGCAACAATTGGAGGATaGTTACTAACCAAAATCACC +
Preference number: 2 (lower is better)
Translates to: MRISFSAESLIALHSMCSATIGG*LLTKIT
Trigger: GGTGATTTTGGTTAGTAACCATCCTCCAATTGTTGC...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CAA 90 bp GACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCTATTaGCCAGGAAGTTGTAATATTGAAAAACTGTGCTCTTCTGAGAAT +
Preference number: 2 (lower is better)
Translates to: DKGNTNLKSEHFLCY*PGSCNIEKLCSSEN
Trigger: ATTCTCAGAAGAGCACAGTTTTTCAATATTACAACTTCCTGGCAAATAGCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR TCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 2 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCCAAACACACATGCCCTaGAAAAGATCATTGTTCAAT +
Preference number: 2 (lower is better)
Translates to: YINTESNQQYKSRSIFTGQTHMP*KRSLFN
Trigger: ATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTG...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR TCA 72 bp GGTTGGCCGCCATCTGGTGGATGCGCTGTGGGATGCTaGCGATGGTCGACGGGGACAGGGCGCTGGCGTTGG +
Preference number: 3 (lower is better)
Translates to: GWPPSGGCAVGC*RWSTGTGRWRW
Trigger: CCAACGCCAGCGCCCTGTCCCCGTCGACCATCGTCAGCATCCCACAGCGCATCCACCAGATGGCGGCCAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR GCA 72 bp TGTTGGGAGTACTGGACCAGGTGCTCCATGCTGCTGTaGAGGGTGACCGGCCCCATGAGCAGATCCAGGTCG +
Preference number: 3 (lower is better)
Translates to: CWEYWTRCSMLL*RVTGPMSRSRS
Trigger: CGACCTGGATCTGCTCATGGGGCCGGTCACCCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTCCCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR CCA 72 bp CTGTTGGTGATGCTGACGTGGTTGGCCGCCATCTGGTaGATGCGCTGTGGGATGCTGACGATGGTCGACGGG +
Preference number: 3 (lower is better)
Translates to: LLVMLTWLAAIW*MRCGMLTMVDG
Trigger: CCCGTCGACCATCGTCAGCATCCCACAGCGCATCCACCAGATGGCGGCCAACCACGTCAGCATCACCAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR GCA 72 bp CTGTGGCCGTTGGAGCCTGGAGACCACGGCTTCGTCTaGGGCCGTGACTTGTGGAGGGGAATGTTTTCAGAA +
Preference number: 3 (lower is better)
Translates to: LWPLEPGDHGFV*GRDLWRGMFSE
Trigger: TTCTGAAAACATTCCCCTCCACAAGTCACGGCCGCAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR CCA 72 bp ATGCTGTTGGTGATGCTGACGTGGTTGGCCGCCATCTaGTGGATGCGCTGTGGGATGCTGACGATGGTCGAC +
Preference number: 3 (lower is better)
Translates to: MLLVMLTWLAAI*WMRCGMLTMVD
Trigger: GTCGACCATCGTCAGCATCCCACAGCGCATCCACCAGATGGCGGCCAACCACGTCAGCATCACCAACAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CAA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGCTGGCAGTCAAGCTTTaGGTGTGCTGTATTGCACCT +
Preference number: 3 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQLAVKL*VCCIAP
Trigger: AGGTGCAATACAGCACACCAAAAGCTTGACTGCCAG...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCAGTCCCTGTGGCCGTaGGAGCCTGGAGACCACGGC +
Preference number: 3 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPQSLWP*EPGDHG
Trigger: GCCGTGGTCTCCAGGCTCCAACGGCCACAGGGACTG...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR GCA 72 bp TGCGAGGCATATCATCGAAGACAAGTTTCTGCCTCTTaGAGTCCCTGTGGCCGTTGGAGCCTGGAGACCACG +
Preference number: 3 (lower is better)
Translates to: CEAYHRRQVSAS*SPCGRWSLETT
Trigger: CGTGGTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAGGCAGAAACTTGTCTTCGATGATATGCCTCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR GCA 72 bp TCGGCACTGCGAGGCATATCATCGAAGACAAGTTTCTaGCTCTTGCAGTCCCTGTGGCCGTTGGAGCCTGGA +
Preference number: 3 (lower is better)
Translates to: SALRGISSKTSF*LLQSLWPLEPG
Trigger: TCCAGGCTCCAACGGCCACAGGGACTGCAAGAGGCAGAAACTTGTCTTCGATGATATGCCTCGCAGTGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CAA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCAATTCTCGGTTTTCCTaGGCCAGGTTGTCGGCCATC +
Preference number: 3 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLNSRFS*ARLSAI
Trigger: GATGGCCGACAACCTGGCCAAGGAAAACCGAGAATT...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CAA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCAGATCCAGGTCGTaGAAGAATTCTCGGTTTTCC +
Preference number: 3 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQSRSRS*KNSRFS
Trigger: GGAAAACCGAGAATTCTTCAACGACCTGGATCTGCT...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR TCA 72 bp GTTGGAGCCTGGAGACCACGGCTTCGTCTGCGGCCGTaGCTTGTGGAGGGGAATGTTTTCAGAATTGTTGTG +
Preference number: 3 (lower is better)
Translates to: VGAWRPRLRLRP*LVEGNVFRIVV
Trigger: CACAACAATTCTGAAAACATTCCCCTCCACAAGTCACGGCCGCAGACGAAGCCGTGGTCTCCAGGCTCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR CCA 72 bp GGTGAAGCAAAGCCAAGTTCCTGTCCCACCCATCTCTaGGATGAGGAGTTCTCCATGGTGACCCTGAGTCAG +
Preference number: 3 (lower is better)
Translates to: GEAKPSSCPTHL*DEEFSMVTLSQ
Trigger: CTGACTCAGGGTCACCATGGAGAACTCCTCATCCCAGAGATGGGTGGGACAGGAACTTGGCTTTGCTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR CAA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTAATATTTCCAAATGCTaGAAGGCCAAAGCCAAATGC +
Preference number: 3 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGNISKC*KAKAKC
Trigger: GCATTTGGCTTTGGCCTTCAAGCATTTGGAAATATT...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAAACTGTGAGCAGTGGTaGTCTCAGGCAGAAGGGACA +
Preference number: 3 (lower is better)
Translates to: QSADKTLLAHLSNGASQGNCEQW*SQAEGT
Trigger: TGTCCCTTCTGCCTGAGACAACCACTGCTCACAGTT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp GGGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGCATGGGGAGTGGTCTTaGGGCTTTTCTCAAAGGAGT +
Preference number: 3 (lower is better)
Translates to: GNWHEEASYFHHSGSGLQHGEWS*GFSQRS
Trigger: ACTCCTTTGAGAAAAGCCCAAAGACCACTCCCCATG...CTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR CAA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACAATGCAGCCAGTTGTTaGTCTTCTGGTGTGGCATTG +
Preference number: 3 (lower is better)
Translates to: QTHRTQEEALVAAAPERNNAASC*SSGVAL
Trigger: CAATGCCACACCAGAAGACAAACAACTGGCTGCATT...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR TCA 72 bp CCAGGGCTACTGGTTGAACAGGAACCCTGTGGCCATTaGGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCA +
Preference number: 3 (lower is better)
Translates to: PGLLVEQEPCGH*DDLLKLPVEPS
Trigger: TGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCTGTTCAACCAGTAGCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR GCA 72 bp CCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTaGTCCACACGTGCTCCACAGATGAAACAAGACAGT +
Preference number: 3 (lower is better)
Translates to: PMPNPTETAVPT*STRAPQMKQDS
Trigger: ACTGTCTTGTTTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGACAGTGTCCAAAAACGTaGAGCCATCTGTGGAGACCA +
Preference number: 3 (lower is better)
Translates to: QSADKTLLAHLSNGASQGQCPKT*SHLWRP
Trigger: TGGTCTCCACAGATGGCTCAACGTTTTTGGACACTG...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCAAATCTCAGTGCCATTaGCATACTACTTGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLKSQCH*HTTWRW
Trigger: CCACCTCCAAGTAGTATGCAAATGGCACTGAGATTT...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCAAAGACGCCGCGTTTTaGCTAAATCTCAGTGCCATT +
Preference number: 3 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLKDAAF*LNLSAI
Trigger: AATGGCACTGAGATTTAGCAAAAACGCGGCGTCTTT...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCCAGTGTCCAAAAACGTaGAGCCATCTGTGGAGACCA +
Preference number: 3 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETQCPKT*SHLWRP
Trigger: TGGTCTCCACAGATGGCTCAACGTTTTTGGACACTG...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGGAAGAGCAGGGTATTaGGTAACATGCAATCTAGTA +
Preference number: 3 (lower is better)
Translates to: QTHRTQEEALVAAAPERNGRAGY*VTCNLV
Trigger: TACTAGATTGCATGTTACCAAATACCCTGCTCTTCC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCATGTGGCTGGTGGGCTaGTTATCACAGGTGCAGAAA +
Preference number: 3 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETMWLVG*LSQVQK
Trigger: TTTCTGCACCTGTGATAACAAGCCCACCAGCCACAT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAATGTGGCTGGTGGGCTaGTTATCACAGGTGCAGAAA +
Preference number: 3 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEMWLVG*LSQVQK
Trigger: TTTCTGCACCTGTGATAACAAGCCCACCAGCCACAT...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTGTCTGCGGCCGTGACTaGTGGAGGGGAATGTTTTCA +
Preference number: 3 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPVCGRD*WRGMFS
Trigger: TGAAAACATTCCCCTCCACAAGTCACGGCCGCAGAC...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR TCA 72 bp TTAAGCCAGTTGATACCACAGTGGCTGGCGCAACTCTaGAGTGTGCATGTTCAGAGTCCTGAGTCCCTAGAC +
Preference number: 3 (lower is better)
Translates to: LSQLIPQWLAQL*SVHVQSPESLD
Trigger: GTCTAGGGACTCAGGACTCTGAACATGCACACTTCAGAGTTGCGCCAGCCACTGTGGTATCAACTGGCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR GCA 72 bp AAAGACGCCGCGTTTTTGCTAAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGGGCTGGGAAGGGCTGT +
Preference number: 3 (lower is better)
Translates to: KDAAFLLNLSAI*ILLGGGAGKGC
Trigger: ACAGCCCTTCCCAGCCCCACCTCCAAGTAGTATGCAAATGGCACTGAGATTTAGCAAAAACGCGGCGTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 72 bp CTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTaGTTGATCCTACTTGACTCCAGGCCCTTCCTGCTG +
Preference number: 3 (lower is better)
Translates to: LHRGNLPFLHNV*LILLDSRPFLL
Trigger: CAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR CAA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCTGGCAGTCAAGCTTTaGGTGTGCTGTATTGCACCT +
Preference number: 3 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRLAVKL*VCCIAP
Trigger: AGGTGCAATACAGCACACCAAAAGCTTGACTGCCAG...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGATTCCATGGGGCCTaGTTCCATTGCATTTCCACA +
Preference number: 3 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNGFHGA*FHCIST
Trigger: TGTGGAAATGCAATGGAACAAGGCCCCATGGAATCC...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR TCA 72 bp CTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATaGAACAAGACAGTCATAAGAACTACACGCTCTGAC +
Preference number: 3 (lower is better)
Translates to: LLYQRAPHVLHR*NKTVIRTTRSD
Trigger: GTCAGAGCGTGTAGTTCTTATGACTGTCTTGTTTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR TCA 72 bp TTAGTGCTTTTGAATACTTTACAGCGTGGTCCCTTTTaGGTCGAAACATCCGCCAGTACAGGAGGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: LVLLNTLQRGPF*VETSASTGGPG
Trigger: GCCTGGCCCTCCTGTACTGGCGGATGTTTCGACTCAAAAGGGACCACGCTGTAAAGTATTCAAAAGCACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR CCA 72 bp TTTGCTTTCTGCCTCTATGAAAATGCTCTGAAGTGCTaGTCTTGGCCAGGCAAGCTACCTGTAGGCCATGTC +
Preference number: 3 (lower is better)
Translates to: FAFCLYENALKC*SWPGKLPVGHV
Trigger: GACATGGCCTACAGGTAGCTTGCCTGGCCAAGACCAGCACTTCAGAGCATTTTCATAGAGGCAGAAAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CCA 72 bp AAGGAGTACACCGCACTGGATATTTATGTCCTTAGTTaGGTTGGGTTAAGCATTCCCATCTGCGTGCCCTGG +
Preference number: 3 (lower is better)
Translates to: KEYTALDIYVLS*VGLSIPICVPW
Trigger: CCAGGGCACGCAGATGGGAATGCTTAACCCAACCCAACTAAGGACATAAATATCCAGTGCGGTGTACTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CCA 72 bp TTCCACTTTGCCAGGTGCTTGAATAGCAGAAAGTGGTaGAAGCCAGGTCATCTCCTGTCGAGGATGAATCCT +
Preference number: 3 (lower is better)
Translates to: FHFARCLNSRKW*KPGHLLSRMNP
Trigger: AGGATTCATCCTCGACAGGAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CCA 72 bp TGGTTCCACTTTGCCAGGTGCTTGAATAGCAGAAAGTaGTGGAAGCCAGGTCATCTCCTGTCGAGGATGAAT +
Preference number: 3 (lower is better)
Translates to: WFHFARCLNSRK*WKPGHLLSRMN
Trigger: ATTCATCCTCGACAGGAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTGGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR CAA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAAATCTCAGTGCCATTaGCATACTACTTGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETKSQCH*HTTWRW
Trigger: CCACCTCCAAGTAGTATGCAAATGGCACTGAGATTT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR TCA 72 bp GCCAACTTCCTAATTACAATGGAGAGGGAACTGGCATaGGGAAGCAAGTTATTTCCACCATTCCGGCAGTGG +
Preference number: 3 (lower is better)
Translates to: ANFLITMERELA*GSKLFPPFRQW
Trigger: CCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCCCTCTCCATTGTAATTAGGAAGTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CCA 72 bp AAAAGACTTGAAACAGATTGGCTGACAAATGCCATGTaGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGA +
Preference number: 3 (lower is better)
Translates to: KRLETDWLTNAM*LYSHRVTVAGR
Trigger: TCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACATGGCATTTGTCAGCCAATCTGTTTCAAGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCCAGTGTCCAAAAACGTaGAGCCATCTGTGGAGACCA +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIQCPKT*SHLWRP
Trigger: TGGTCTCCACAGATGGCTCAACGTTTTTGGACACTG...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGAAATCTCAGTGCCATTaGCATACTACTTGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRKSQCH*HTTWRW
Trigger: CCACCTCCAAGTAGTATGCAAATGGCACTGAGATTT...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TTTCAAACAAGCCAACTTCCTAATTACAATGGAGAGGGAACTGGCATGAGGAAGTGGGCTTTAAGCCAGTaGATACCACAGTGGCTGGCG +
Preference number: 3 (lower is better)
Translates to: FQTSQLPNYNGEGTGMRKWALSQ*IPQWLA
Trigger: CGCCAGCCACTGTGGTATCAACTGGCTTAAAGCCCA...CTTCCTCATGCCAGTTCCCTCTCCATTGTAATTAGGAAGTTGGCTTGTTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR CAA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGCCAGTGCAGGCCCTGTaGGGAGTACTGGACCAGGTG +
Preference number: 3 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMPVQAL*GVLDQV
Trigger: CACCTGGTCCAGTACTCCCAACAGGGCCTGCACTGG...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCAGTGTCCAAAAACGTaGAGCCATCTGTGGAGACCA +
Preference number: 3 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSQCPKT*SHLWRP
Trigger: TGGTCTCCACAGATGGCTCAACGTTTTTGGACACTG...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGATGTGGCTGGTGGGCTaGTTATCACAGGTGCAGAAA +
Preference number: 3 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQMWLVG*LSQVQK
Trigger: TTTCTGCACCTGTGATAACAAGCCCACCAGCCACAT...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGACTCTTTCAAAGGCAATaGAACATCGTGATAAAGGAT +
Preference number: 3 (lower is better)
Translates to: QSADKTLLAHLSNGASQGLFQRQ*NIVIKD
Trigger: ATCCTTTATCACGATGTTCAATTGCCTTTGAAAGAG...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 72 bp AACTTTCAAAGACGCCGCGTTTTTGCTAAATCTCAGTaGCATTTGCATACTACTTGGAGGTGGGGCTGGGAA +
Preference number: 3 (lower is better)
Translates to: NFQRRRVFAKSQ*HLHTTWRWGWE
Trigger: TTCCCAGCCCCACCTCCAAGTAGTATGCAAATGGCACTGAGATTTAGCAAAAACGCGGCGTCTTTGAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 72 bp AGAAATGCATGTGGCTGGTGGGCTTGTTATCACAGGTaGAGAAAACTTCAACTCCTAACTGAGCTCCAACAC +
Preference number: 3 (lower is better)
Translates to: RNACGWWACYHR*RKLQLLTELQH
Trigger: GTGTTGGAGCTCAGTTAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGCCCACCAGCCACATGCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 72 bp AATGAAGTTAACAAACTTACCCTCCCACATAGGGGATaGTTCATGTCAAGCCACTGGTCTAATGCCTCCGTC +
Preference number: 3 (lower is better)
Translates to: NEVNKLTLPHRG*FMSSHWSNASV
Trigger: GACGGAGGCATTAGACCAGTGGCTTGACATGAAGCATCCCCTATGTGGGAGGGTAAGTTTGTTAACTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR GCA 72 bp CTGATTCAGCTTTTCAGGCTACATCAATACCCCTGGTaGTTCAACACAAATGCTGACCCTTGTACTGACTGG +
Preference number: 3 (lower is better)
Translates to: LIQLFRLHQYPW*FNTNADPCTDW
Trigger: CCAGTCAGTACAAGGGTCAGCATTTGTGTTGAAGCACCAGGGGTATTGATGTAGCCTGAAAAGCTGAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR CCA 72 bp CCACTGCCCACAACGGTAAGTTTCAAGAAGTTTTCCTaGGAAATGTGGGCCATCAGAGTGCTGATAAAACAC +
Preference number: 3 (lower is better)
Translates to: PLPTTVSFKKFS*EMWAIRVLIKH
Trigger: GTGTTTTATCAGCACTCTGATGGCCCACATTTCCCAGGAAAACTTCTTGAAACTTACCGTTGTGGGCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCCCTGCAAAAGATCATaGTTCAATGCTGAGGAAATG +
Preference number: 3 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPPCKRS*FNAEEM
Trigger: CATTTCCTCAGCATTGAACAATGATCTTTTGCAGGG...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACCCCTGCAAAAGATCATaGTTCAATGCTGAGGAAATG +
Preference number: 3 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNPCKRS*FNAEEM
Trigger: CATTTCCTCAGCATTGAACAATGATCTTTTGCAGGG...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATAAAGACGCCGCGTTTTaGCTAAATCTCAGTGCCATT +
Preference number: 3 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHKDAAF*LNLSAI
Trigger: AATGGCACTGAGATTTAGCAAAAACGCGGCGTCTTT...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATTCTAGTCTAAGTATTTaGTGCCGTCATCACCTTGAA +
Preference number: 3 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNSSLSI*CRHHLE
Trigger: TTCAAGGTGATGACGGCACAAAATACTTAGACTAGA...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAACTTTTCCACCATaGCATCTGCTTTATGCTTCA +
Preference number: 3 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYQTFPP*HLLYAS
Trigger: TGAAGCATAAAGCAGATGCAATGGTGGAAAAGTTTG...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR GCA 72 bp AATCAAAACGCATCAAAGGGCTGCAGGTGCACATTCTaGATGAGGAGTGAGAGAATCAGCATTATCATGGCA +
Preference number: 3 (lower is better)
Translates to: NQNASKGCRCTF*MRSERISIIMA
Trigger: TGCCATGATAATGCTGATTCTCTCACTCCTCATGCAGAATGTGCACCTGCAGCCCTTTGATGCGTTTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 72 bp CACCATGTTGGTTTCAGTTGTGTGCAGTTCCCTGACTaGACACAAGTCAGGGAACTAACTTGTGACACTAAA +
Preference number: 3 (lower is better)
Translates to: HHVGFSCVQFPD*TQVRELTCDTK
Trigger: TTTAGTGTCACAAGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAACATGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR CAA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAACAGTGTCCAAAAACGTaGAGCCATCTGTGGAGACCA +
Preference number: 3 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKQCPKT*SHLWRP
Trigger: TGGTCTCCACAGATGGCTCAACGTTTTTGGACACTG...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATTCTGTAAGAAAGCTATaGGTGGAAAGAAAAGACTTG +
Preference number: 3 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYSVRKL*VERKDL
Trigger: CAAGTCTTTTCTTTCCACCAATAGCTTTCTTACAGA...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGCCCTGCAAAAGATCATaGTTCAATGCTGAGGAAATG +
Preference number: 3 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLPCKRS*FNAEEM
Trigger: CATTTCCTCAGCATTGAACAATGATCTTTTGCAGGG...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACTCTGTAAGAAAGCTATaGGTGGAAAGAAAAGACTTG +
Preference number: 3 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNSVRKL*VERKDL
Trigger: CAAGTCTTTTCTTTCCACCAATAGCTTTCTTACAGA...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR TCA 72 bp CAGATGAAACAAGACAGTCATAAGAACTACACGCTCTaGCCACTGCCCACAACGGTAAGTTTCAAGAAGTTT +
Preference number: 3 (lower is better)
Translates to: QMKQDSHKNYTL*PLPTTVSFKKF
Trigger: AAACTTCTTGAAACTTACCGTTGTGGGCAGTGGTCAGAGCGTGTAGTTCTTATGACTGTCTTGTTTCATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATCTGGCAGTCAAGCTTTaGGTGTGCTGTATTGCACCT +
Preference number: 3 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYLAVKL*VCCIAP
Trigger: AGGTGCAATACAGCACACCAAAAGCTTGACTGCCAG...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTAATATTTCCAAATGCTaGAAGGCCAAAGCCAAATGC +
Preference number: 3 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIINISKC*KAKAKC
Trigger: GCATTTGGCTTTGGCCTTCAAGCATTTGGAAATATT...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTCTGGCAGTCAAGCTTTaGGTGTGCTGTATTGCACCT +
Preference number: 3 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLILAVKL*VCCIAP
Trigger: AGGTGCAATACAGCACACCAAAAGCTTGACTGCCAG...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTTCTGTAAGAAAGCTATaGGTGGAAAGAAAAGACTTG +
Preference number: 3 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIISVRKL*VERKDL
Trigger: CAAGTCTTTTCTTTCCACCAATAGCTTTCTTACAGA...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGAAACCTCTGATCACTTaGTCTAGCCTGGGATTATGG +
Preference number: 3 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMKPLIT*SSLGLW
Trigger: CCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTT...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 72 bp TTCCATTGCATTTCCACACTCGATAAACGACAATGCTaGTTCAGCATAGTTCAAAGCCTTTCCAAACTTTTC +
Preference number: 3 (lower is better)
Translates to: FHCISTLDKRQC*FSIVQSLSKLF
Trigger: GAAAAGTTTGGAAAGGCTTTGAACTATGCTGAAGCAGCATTGTCGTTTATCGAGTGTGGAAATGCAATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR CCA 72 bp GAATGGGAAAATGAGGACATAAACTCTGGTTCCAAATaGTTGGAAGTGCAGTTTATGTGGTCAGGTTGTTTT +
Preference number: 3 (lower is better)
Translates to: EWENEDINSGSK*LEVQFMWSGCF
Trigger: AAAACAACCTGACCACATAAACTGCACTTCCAACCATTTGGAACCAGAGTTTATGTCCTCATTTTCCCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR CCA 72 bp TTGAATTTTCTAAGAAGTCACGGTTTAGCACTGGAATaGAATAGAAAGTGTGTGTCTGTGATTGTGTGTGAG +
Preference number: 3 (lower is better)
Translates to: LNFLRSHGLALE*NRKCVSVIVCE
Trigger: CTCACACACAATCACAGACACACACTTTCTATTCCATTCCAGTGCTAAACCGTGACTTCTTAGAAAATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTCCCTGCAAAAGATCATaGTTCAATGCTGAGGAAATG +
Preference number: 3 (lower is better)
Translates to: RISVNVYGSASSLSILCRPCKRS*FNAEEM
Trigger: CATTTCCTCAGCATTGAACAATGATCTTTTGCAGGG...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAAATATTTCCAAATGCTaGAAGGCCAAAGCCAAATGC +
Preference number: 3 (lower is better)
Translates to: MRISFSAESLIALHSMCSNISKC*KAKAKC
Trigger: GCATTTGGCTTTGGCCTTCAAGCATTTGGAAATATT...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CCA 72 bp CAAGTTAACCCCTTTGGTGACATATACAGAATAATCTaGACAAAGGGAACACAAATCTCAAGTCTGAACATT +
Preference number: 3 (lower is better)
Translates to: QVNPFGDIYRII*TKGTQISSLNI
Trigger: AATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTGTATATGTCACCAAAGGGGTTAACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR CAA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATCATTCGTTTAGCTTCTaGCATAAAATAATCGGCACT +
Preference number: 3 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYHSFSF*HKIIGT
Trigger: AGTGCCGATTATTTTATGCAAGAAGCTAAACGAATG...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR GCA 72 bp AAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTaGTATTTGCCAGGAAGTTGTAATATTGAAAAACTG +
Preference number: 3 (lower is better)
Translates to: KGNTNLKSEHFL*YLPGSCNIEKL
Trigger: CAGTTTTTCAATATTACAACTTCCTGGCAAATAGCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTACAGGGCACTGCGGGTaGCGGGGCGGCTGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGTGHCG*RGGCAH
Trigger: GTGAGCGCAGCCGCCCCGCCACCCGCAGTGCCCTGT...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTACGGGGACAGGGCGCTaGCGTTGGAGAGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGTGTGR*RWRGCP
Trigger: AGGGCAGCCTCTCCAACGCCAGCGCCCTGTCCCCGT...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTTGGCAGGCTCCGGCTTaGTGGCAGGGACTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGWQAPA*WQGLPC
Trigger: ACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCA...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTAGGGTGAGGTCCCTATaGCAGGTGGGCGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGRVRSL*QVGAVP
Trigger: CGGAACAGCGCCCACCTGTCATAGGGACCTCACCCT...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGCGCTGCTGCTGTGCTTaGCCGCCATGGCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQRCCCA*PPWQVA
Trigger: GGCCACCTGCCATGGCGGCCAAGCACAGCAGCAGCG...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTTGCTGCTGCTGCCCTTaGTGGAAGGCACCGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGCCCCP*WKAPRF
Trigger: GAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCA...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTCTCTTGCAGTCCCTGTaGCCGTTGGAGCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGLLQSL*PLEPGD
Trigger: GTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAG...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGGACCAGAGCCCACTCTaGCCCCAGGGTGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQDQSPL*PQGEVP
Trigger: AGGGACCTCACCCTGGGGCCAGAGTGGGCTCTGGTC...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCGCTTGGCCTTGGCTCTaGCAGGCTCCGGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GEASGHLQSWRKVKGKQGAWPWL*QAPACW
Trigger: CCAGCAAGCCGGAGCCTGCCAGAGCCAAGGCCAAGC...GCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACACAGGGCACTGCGGGTaGCGGGGCGGCTGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNTGHCG*RGGCAH
Trigger: GTGAGCGCAGCCGCCCCGCCACCCGCAGTGCCCTGT...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGACCACTGCCCCCGTTaGCAGCGGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLDHCPR*QRPPSA
Trigger: GGCTGAAGGAGGCCGCTGCCAACGGGGGCAGTGGTC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGAGACCCCACGGAGCTaGCGGGAGAGGGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAETPRS*RERGWE
Trigger: CTCCCAACCCCTCTCCCGCCAGCTCCGTGGGGTCTC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGAGACCCCACGGAGCTaGCGGGAGAGGGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLETPRS*RERGWE
Trigger: CTCCCAACCCCTCTCCCGCCAGCTCCGTGGGGTCTC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGGACTCATCAGGGGCCTaGTCTTGGCCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQDSSGA*SWPSIG
Trigger: GCCAATGGACGGCCAAGATCAGGCCCCTGATGAGTC...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCTGGCAGGCTCCGGCTTaGTGGCAGGGACTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAWQAPA*WQGLPC
Trigger: ACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCA...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCTGCTTAGCCCCCGCGTaGGGCGCTTCTCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLACLAPA*GASRRS
Trigger: TGACCTGCGAGAAGCGCCGCACGCGGGGGCTAAGCA...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCCGAGGTTCTGCAGTTaGGCTGCTGGACCACGGCGC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAPRFCS*AAGPRR
Trigger: GCGCCGTGGTCCAGCAGCCCAACTGCAGAACCTCGG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCACAGGGCACTGCGGGTaGCGGGGCGGCTGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETTGHCG*RGGCAH
Trigger: GTGAGCGCAGCCGCCCCGCCACCCGCAGTGCCCTGT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGGTGTGTCCGAGGTGTaGCTGGGCGGTGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLGVSEV*LGGALS
Trigger: TGAGAGCGCACCGCCCAGCCACACCTCGGACACACC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGGTGTGTCCGAGGTGTaGCTGGGCGGTGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNGVSEV*LGGALS
Trigger: TGAGAGCGCACCGCCCAGCCACACCTCGGACACACC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGGTGTGTCCGAGGTGTaGCTGGGCGGTGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAGVSEV*LGGALS
Trigger: TGAGAGCGCACCGCCCAGCCACACCTCGGACACACC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTCACGGAGATGGGGCTTaGGCGGCTTTAGATGAGTTC +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGHGDGA*AALDEF
Trigger: GAACTCATCTAAAGCCGCCCAAGCCCCATCTCCGTG...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGTGGTTGGCCGCCATCTaGTGGATGCGCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQWLAAI*WMRCGM
Trigger: CATCCCACAGCGCATCCACCAGATGGCGGCCAACCA...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCAGGGTGAGGTCCCTATaGCAGGTGGGCGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLARVRSL*QVGAVP
Trigger: CGGAACAGCGCCCACCTGTCATAGGGACCTCACCCT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACACTCTGGCCCCAGGGTaGGGTCCCTATGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNTLAPG*GPYDRW
Trigger: CCACCTGTCATAGGGACCTCACCCTGGGGCCAGAGT...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCACTCTGGCCCCAGGGTaGGGTCCCTATGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLATLAPG*GPYDRW
Trigger: CCACCTGTCATAGGGACCTCACCCTGGGGCCAGAGT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTAGAGCCCTGTTGTGTTaGTCTCTGTTGGCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGRALLC*SLLAVR
Trigger: TCTGACGGCCAACAGAGAGCAACACAACAGGGCTCT...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGGGCCCACCTCCACATTaGACACTTGTTTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQGPPPH*TLVWPE
Trigger: CTCGGGCCAAACAAGTGTGCAATGTGGAGGTGGGCC...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCACAGTGTCCGCTGCTaGTGTGCTTGGCCGCCATGG +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAHSVRC*CAWPPW
Trigger: CCATGGCGGCCAAGCACAGCAGCAGCGGACACTGTG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCGCCTGGTGGGCTTCTTaGCCGCGGACCTCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETAWWAS*PRTSGQ
Trigger: CTGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGC...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGCCTGGTGGGCTTCTTaGCCGCGGACCTCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHAWWAS*PRTSGQ
Trigger: CTGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGGTGTGGCTGGGCGGTaGGCTCTCAGAGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLGVAGR*ALRVLG
Trigger: ACCAAGGACTCTGAGAGCGCACCGCCCAGCCACACC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGACCACGGCTTCGTCTaGGGCCGTGACTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNDHGFV*GRDLWR
Trigger: CCTCCACAAGTCACGGCCGCAGACGAAGCCGTGGTC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCTGCCCTCACTCTCGCTaGAGCTGCTCTCGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLCPHSR*SCSRSP
Trigger: CGGAGACCGAGAGCAGCTCCAGCGAGAGTGAGGGCA...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTCCTCTCGGTGCGCCTaGTGGGCTTCTTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNSSRCA*WASCPR
Trigger: CCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGA...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGCGCTCTCAGAGTCCTTaGTGGCAGGGGCGCTCAATA +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQRSQSP*WQGRSI
Trigger: TATTGAGCGCCCCTGCCACCAAGGACTCTGAGAGCG...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCTGTCCGAGGTGTGGCTaGGCGGTGCGCTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLCPRCG*AVRSQS
Trigger: ACTCTGAGAGCGCACCGCCCAGCCACACCTCGGACA...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCGAGACCCCACGGAGCTaGCGGGAGAGGGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGETPRS*RERGWE
Trigger: CTCCCAACCCCTCTCCCGCCAGCTCCGTGGGGTCTC...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGGTGGCTCATGCACTTTaGGAGGCCGAGGCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQVAHAL*EAEAKG
Trigger: TCCTTTGGCCTCGGCCTCCCAAAGTGCATGAGCCAC...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGTGTCCTGTACACCCTaGCCCTGGGAGCGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GNWHEEASYFHHSGSGLQVSCTP*PWERRL
Trigger: GAGCCTGCGCTCCCAGGGCCAGGGTGTACAGGACAC...CTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGACTCATCAGGGGCCTaGTCTTGGCCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLDSSGA*SWPSIG
Trigger: GCCAATGGACGGCCAAGATCAGGCCCCTGATGAGTC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGACTCATCAGGGGCCTaGTCTTGGCCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNDSSGA*SWPSIG
Trigger: GCCAATGGACGGCCAAGATCAGGCCCCTGATGAGTC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGACTCATCAGGGGCCTaGTCTTGGCCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLADSSGA*SWPSIG
Trigger: GCCAATGGACGGCCAAGATCAGGCCCCTGATGAGTC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGTGAGGTCTCCGCCGTaGGGCTGCAGCTGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHVRSPP*GCSWLS
Trigger: CGACAGCCAGCTGCAGCCTCACGGCGGAGACCTCAC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGTGAGGTCTCCGCCGTaGGGCTGCAGCTGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQVRSPP*GCSWLS
Trigger: CGACAGCCAGCTGCAGCCTCACGGCGGAGACCTCAC...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTTGGAGAGGCTGCCCTaGGACCCCACGGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLERLP*DPTELA
Trigger: CGCCAGCTCCGTGGGGTCTCAGGGCAGCCTCTCCAA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GGGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGCACAGTGTCCGCTGCTaGTGTGCTTGGCCGCCATGG +
Preference number: 4 (lower is better)
Translates to: GNWHEEASYFHHSGSGLQHSVRC*CAWPPW
Trigger: CCATGGCGGCCAAGCACAGCAGCAGCGGACACTGTG...CTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGAACACAGTGTCCGCTaGTGCTGTGCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLEHSVR*CCAWPP
Trigger: TGGCGGCCAAGCACAGCAGCAGCGGACACTGTGTTC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTTCTCCACAACGTTTGCTTGATCCTACTTGACTCCAGGCCCTTCCTGCTGGGCTGGCAGGCTCCGGCTTaGTGGCAGGGACTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: FLHNVCLILLDSRPFLLGWQAPA*WQGLPC
Trigger: ACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCA...GCCCAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGCGGGCGGGGACTTCTaGTTCACGCCTTTACTCCCA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAAGGDF*FTPLLP
Trigger: TGGGAGTAAAGGCGTGAAGCAGAAGTCCCCGCCCGC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGGGAAGAGGCTCTGGTTaGTGCTGCCCCAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQGRGSG*CCPRKE
Trigger: TTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCC...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACCCAGGAGGCAGAGGATaGAGTGAGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNPGGRG*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCATCCTCTGCCTCCTGG...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CCCTTCCTGCTGGGCTTTAAGCCAGTTGATACCACAGTGGCTGGCGCAACTCTGGTCCCACAGAGCAGATaGGCCACAGGCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PFLLGFKPVDTTVAGATLVPQSR*ATGCVL
Trigger: CAGGACACAGCCTGTGGCGCATCTGCTCTGTGGGAC...CAGAGTTGCGCCAGCCACTGTGGTATCAACTGGCTTAAAGCCCAGCAGGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTTGTTCTGGATCCGGTTaGAGAGTTCATCCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGCSGSG*RVHPPC
Trigger: ACAAGGGGGATGAACTCTCCAACCGGATCCAGAACA...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCGGCCGCCATGGCAGGTaGCCTCTCCTGGGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGGRHGR*PLLGLK
Trigger: CTTCAGACCCAGGAGAGGCCACCTGCCATGGCGGCC...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTCTCCACAACGTTTGCTTGATCCTACTTGACTCCAGGCCCTTCCTGCTGGGCTGTGCTTGGCCGCCATaGCAGGTGGCCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: FLHNVCLILLDSRPFLLGCAWPP*QVASPG
Trigger: CCCAGGAGAGGCCACCTGCCATGGCGGCCAAGCACA...GCCCAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACCCGAGGTTCTGCAGTTaGGCTGCTGGACCACGGCGC +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNPRFCS*AAGPRR
Trigger: GCGCCGTGGTCCAGCAGCCCAACTGCAGAACCTCGG...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCTGCTGCTGCCCTTGCTaGAAGGCACCGAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLCCCPC*KAPRFC
Trigger: GCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCA...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCCTCTCGGTGCGCCTaGTGGGCTTCTTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHSSRCA*WASCPR
Trigger: CCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTTGCGGCCGTGACTTGTaGAGGGGAATGTTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGCGRDL*RGMFSE
Trigger: TTCTGAAAACATTCCCCTCCACAAGTCACGGCCGCA...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCTCTTGCAGTCCCTGTaGCCGTTGGAGCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLALLQSL*PLEPGD
Trigger: GTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACACAGGGCGCTGGCGTTaGAGAGGCTGCCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNTGRWR*RGCPET
Trigger: GGTCTCAGGGCAGCCTCTCCAACGCCAGCGCCCTGT...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAACAGGGCGCTGGCGTTaGAGAGGCTGCCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGTGRWR*RGCPET
Trigger: GGTCTCAGGGCAGCCTCTCCAACGCCAGCGCCCTGT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACACGGGGACAGGGCGCTaGCGTTGGAGAGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHTGTGR*RWRGCP
Trigger: AGGGCAGCCTCTCCAACGCCAGCGCCCTGTCCCCGT...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCCACCATTCCGGCAGTaGGCTCCAGGCTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: PGRVPLGDHSSSCTEETFPPFRQ*APGSQM
Trigger: CATCTGGGAGCCTGGAGCCCACTGCCGGAATGGTGG...GAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp CGTAGCAGAGAACACAGGGTTTCAATGGTCAGTGGAGCTGAGACAGAGGAGGGCGACTCATCAGGGGCCTaGTCTTGGCCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: RSREHRVSMVSGAETEEGDSSGA*SWPSIG
Trigger: GCCAATGGACGGCCAAGATCAGGCCCCTGATGAGTC...GCCCTCCTCTGTCTCAGCTCCACTGACCATTGAAACCCTGTGTTCTCTGCTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR TCA 90 bp CCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCGACTCATCAGGGGCCTaGTCTTGGCCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: PGRVPLGDHSSSCTEETFDSSGA*SWPSIG
Trigger: GCCAATGGACGGCCAAGATCAGGCCCCTGATGAGTC...GAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp CCCTTCCTGCTGGGCTTTAAGCCAGTTGATACCACAGTGGCTGGCGCAACTCTGAGGGACTCCCCTGTATaGTGTGCAGTGCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: PFLLGFKPVDTTVAGATLRDSPV*CAVHAG
Trigger: ACCAGCGTGCACTGCACATCATACAGGGGAGTCCCT...CAGAGTTGCGCCAGCCACTGTGGTATCAACTGGCTTAAAGCCCAGCAGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCCTGCTTGGGGATGCTaGACTTGGAGAGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAPAWGC*TWRAWP
Trigger: AGGCCAAGCTCTCCAAGTTCAGCATCCCCAAGCAGG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp TGGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCCTGCTTGGGGATGCTaGACTTGGAGAGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: WGGLRTLTIMAEGEGEARPAWGC*TWRAWP
Trigger: AGGCCAAGCTCTCCAAGTTCAGCATCCCCAAGCAGG...CCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR TCA 90 bp GGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCACCGGAGAGCCGTTCTCTaGGCTGCCTGCTGTTCATTC +
Preference number: 4 (lower is better)
Translates to: GGLRTLTIMAEGEGEARHRRAVL*AACCSF
Trigger: GAATGAACAGCAGGCAGCTCAGAGAACGGCTCTCCG...GTGCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGGGCGCCGTCCCCGGCTaGGGTCCTCTCGGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLGAVPG*GPLGAP
Trigger: AGGCGCACCGAGAGGACCTCAGCCGGGGACGGCGCC...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGCTCCCTGGGACTTCTTaGTCTCCCTGTAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQLPGTS*SPCSRL
Trigger: AAGACGACTACAGGGAGATCAAGAAGTCCCAGGGAG...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGTGAGGTCTCCGCCGTaGGGCTGCAGCTGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNVRSPP*GCSWLS
Trigger: CGACAGCCAGCTGCAGCCTCACGGCGGAGACCTCAC...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCTTCGTCTGCGGCCGTaGCTTGTGGAGGGGAATGTT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLALRLRP*LVEGNV
Trigger: AACATTCCCCTCCACAAGTCACGGCCGCAGACGAAG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTCAAAACCCAAGTCCCTaGTTCAGCTTTTCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGQNPSP*FSFSGY
Trigger: GTAGCCTGAAAAGCTGAATCAGGGACTTGGGTTTTG...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGTGCCTCTCTTACTCTaGTGCACGGGGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAVPLLL*CTGTAA
Trigger: AGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGGCAC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAACCGTCAGAGGGTGGGTaGCCAGCCTTCTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKPSEGG*PAFCQP
Trigger: GGGCTGGCAGAAGGCTGGGCACCCACCCTCTGACGG...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTGTCCGCTGCTGCTGTaGTTGGCCGCCATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNCPLLL*LAAMAG
Trigger: ACCTGCCATGGCGGCCAAGCACAGCAGCAGCGGACA...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGGAACACAGTGTCCGCTaGTGCTGTGCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GTGMRKQVISTIPAVGSREHSVR*CCAWPP
Trigger: TGGCGGCCAAGCACAGCAGCAGCGGACACTGTGTTC...CCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCAGTCAGATCCGGAGCTaGTCTCTGAGTCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLASQIRS*SLSRWR
Trigger: CCTCCAGCGACTCAGAGAGCAGCTCCGGATCTGACT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCCACTTGTTAGAGGATaGCGGTTCAGCCTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAPLVRG*RFSLGA
Trigger: AGCCCCGAGGCTGAACCGGCATCCTCTAACAAGTGG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGGCAGCCACGGTCTGTaGTTTGGACAGAGGGTACTC +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLGSHGL*FGQRVL
Trigger: GAGTACCCTCTGTCCAAAGCACAGACCGTGGCTGCC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGATGCTCCATGCTGCTGTaGAGGGTGACCGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGCSMLL*RVTGPM
Trigger: CATGGGGCCGGTCACCCTGCACAGCAGCATGGAGCA...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGGCCGCCATGGCAGGTaGCCTCTCCTGGGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTGRHGR*PLLGLK
Trigger: CTTCAGACCCAGGAGAGGCCACCTGCCATGGCGGCC...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCTGTGCTTGGCCGCCATaGCAGGTGGCCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETCAWPP*QVASPG
Trigger: CCCAGGAGAGGCCACCTGCCATGGCGGCCAAGCACA...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCATCTTGGCCGTCCATTaGCCTCACATACGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAILAVH*PHIRGR
Trigger: CCGACCGCGTATGTGAGGCCAATGGACGGCCAAGAT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACGCTTGGCCTTGGCTCTaGCAGGCTCCGGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHAWPWL*QAPACW
Trigger: CCAGCAAGCCGGAGCCTGCCAGAGCCAAGGCCAAGC...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACCTGCAGTTGGGCTGCTaGACCACGGCGCTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNLQLGC*TTALSE
Trigger: CTCTGACAGCGCCGTGGTCCAGCAGCCCAACTGCAG...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAATCTCGGTGCGCCTGGTaGGCTTCTTGCCCGCGGACC +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKSRCAW*ASCPRT
Trigger: GGTCCGCGGGCAAGAAGCCCACCAGGCGCACCGAGA...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGACCACTGCCCCCGTTaGCAGCGGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNDHCPR*QRPPSA
Trigger: GGCTGAAGGAGGCCGCTGCCAACGGGGGCAGTGGTC...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCTCTCAGAGTCCTTGGTaGCAGGGGCGCTCAATACCC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLASQSPW*QGRSIP
Trigger: GGGTATTGAGCGCCCCTGCCACCAAGGACTCTGAGA...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACTCTCAGAGTCCTTGGTaGCAGGGGCGCTCAATACCC +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNSQSPW*QGRSIP
Trigger: GGGTATTGAGCGCCCCTGCCACCAAGGACTCTGAGA...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCGCTCTCAGAGTCCTTaGTGGCAGGGGCGCTCAATA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLARSQSP*WQGRSI
Trigger: TATTGAGCGCCCCTGCCACCAAGGACTCTGAGAGCG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGGTGTGTCCGAGGTGTaGCTGGGCGGTGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTGVSEV*LGGALS
Trigger: TGAGAGCGCACCGCCCAGCCACACCTCGGACACACC...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAGGTGTGTCCGAGGTGTaGCTGGGCGGTGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEGVSEV*LGGALS
Trigger: TGAGAGCGCACCGCCCAGCCACACCTCGGACACACC...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGGAGACCCCACGGAGCTaGCGGGAGAGGGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRETPRS*RERGWE
Trigger: CTCCCAACCCCTCTCCCGCCAGCTCCGTGGGGTCTC...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGACGGGGACAGGGCGCTaGCGTTGGAGAGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRTGTGR*RWRGCP
Trigger: AGGGCAGCCTCTCCAACGCCAGCGCCCTGTCCCCGT...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGCTGCACCCCTCTGCCTaGTTAATGAGGACTCAACTG +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQLHPSA*LMRTQL
Trigger: CAGTTGAGTCCTCATTAACCAGGCAGAGGGGTGCAG...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCAGCGTGGTCCCTTTTaGGTCGAAACATCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAQRGPF*VETSAS
Trigger: ACTGGCGGATGTTTCGACTCAAAAGGGACCACGCTG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAACTCTGGCCCCAGGGTaGGGTCCCTATGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQTLAPG*GPYDRW
Trigger: CCACCTGTCATAGGGACCTCACCCTGGGGCCAGAGT...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCACTCTGGCCCCAGGGTaGGGTCCCTATGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETTLAPG*GPYDRW
Trigger: CCACCTGTCATAGGGACCTCACCCTGGGGCCAGAGT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGTGTCCAAAAACGTTaGGCCATCTGTGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQSVQKR*AICGDQ
Trigger: CTGGTCTCCACAGATGGCTCAACGTTTTTGGACACT...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CCCTTCCTGCTGGGCTTTAAGCCAGTTGATACCACAGTGGCTGGCGCAACTCTGCTCCAGGCTCCCAGATaGAGAGCTGATTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PFLLGFKPVDTTVAGATLLQAPR*RADSFP
Trigger: TGGGAAGGAATCAGCTCTTCATCTGGGAGCCTGGAG...CAGAGTTGCGCCAGCCACTGTGGTATCAACTGGCTTAAAGCCCAGCAGGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp CCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCCTCTCTTACTCTGCTaGACGGGGACAGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PGRVPLGDHSSSCTEETFPLLLC*TGTAAG
Trigger: ACCAGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGG...GAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp TGGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGTACGCGGTCGGTTTCTaGTGGACCAGGCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: WGGLRTLTIMAEGEGEARYAVGF*WTRLGF
Trigger: AAAACCCAGCCTGGTCCAGCAGAAACCGACCGCGTA...CCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCGCCTGGTGGGCTTCTTaGCCGCGGACCTCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIAWWAS*PRTSGQ
Trigger: CTGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGC...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACATTTGGGGACGATCCTaGTTAGCCCCCGCGTGCGGC +
Preference number: 4 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHIWGRS*LAPACG
Trigger: GCCGCACGCGGGGGCTAAGCAGGATCGTCCCCAAAT...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATTGGCGTTGGAGAGGCTaGCCTGAGACCCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYWRWRG*PETPRS
Trigger: GCTCCGTGGGGTCTCAGGGCAGCCTCTCCAACGCCA...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGNLSAI*ILLGGG
Trigger: CCCACCTCCAAGTAGTATGCAAATGGCACTGAGATT...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTCATCAATACCCCTGGTaGTTCAACACAAATGCTGAC +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGHQYPW*FNTNAD
Trigger: GTCAGCATTTGTGTTGAAGCACCAGGGGTATTGATG...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTTGGCCGTCAGAGGGTaGGTGCCCAGCCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLAVRG*VPSLLP
Trigger: TGGCAGAAGGCTGGGCACCCACCCTCTGACGGCCAA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCTTGGCCGTCAGAGGGTaGGTGCCCAGCCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETLAVRG*VPSLLP
Trigger: TGGCAGAAGGCTGGGCACCCACCCTCTGACGGCCAA...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGCGGTCGGTTTCTGCTaGACCAGGCTGGGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAAVGFC*TRLGFE
Trigger: TTCAAAACCCAGCCTGGTCCAGCAGAAACCGACCGC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGCGGTCGGTTTCTGCTaGACCAGGCTGGGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNAVGFC*TRLGFE
Trigger: TTCAAAACCCAGCCTGGTCCAGCAGAAACCGACCGC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGATCTTGGCCGTCCATTaGCCTCACATACGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: GTGMRKQVISTIPAVGSRILAVH*PHIRGR
Trigger: CCGACCGCGTATGTGAGGCCAATGGACGGCCAAGAT...CCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCCAGGCTCCGGCTTGCTaGCAGGGACTCCCCTGTATG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETQAPAC*QGLPCM
Trigger: CATACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTG...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTCATGGGGAGTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATAGCTTGGCCTTGGCTCTaGCAGGCTCCGGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SHGEWSLGFSQRSTPHWIAWPWL*QAPACW
Trigger: CCAGCAAGCCGGAGCCTGCCAGAGCCAAGGCCAAGC...TATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCACTCCCCATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCGAGGTTCTGCAGTTaGGCTGCTGGACCACGGCGC +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRPRFCS*AAGPRR
Trigger: GCGCCGTGGTCCAGCAGCCCAACTGCAGAACCTCGG...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTTGCTCTCTGAGTCGCTaGAGGAGCTGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTCSLSR*RSCCCR
Trigger: GCGGCAGCAGCAGCTCCTCCAGCGACTCAGAGAGCA...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGCCCTCACTCTCGCTaGAGCTGCTCTCGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHCPHSR*SCSRSP
Trigger: CGGAGACCGAGAGCAGCTCCAGCGAGAGTGAGGGCA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCACAGGGCACTGCGGGTaGCGGGGCGGCTGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSTGHCG*RGGCAH
Trigger: GTGAGCGCAGCCGCCCCGCCACCCGCAGTGCCCTGT...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGACGCAGCTCCTTGCGGTaGCTCGCTCTGTTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGRSSLR*LALLLP
Trigger: TGGCAACAACAGAGCGAGCCACCGCAAGGAGCTGCG...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCGTGGCCGTTGGAGCCTaGAGACCACGGCTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETVAVGA*RPRLRL
Trigger: CAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCAC...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGTGGCCGTTGGAGCCTaGAGACCACGGCTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHVAVGA*RPRLRL
Trigger: CAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCAC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCACGGAGATGGGGCTTaGGCGGCTTTAGATGAGTTC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAHGDGA*AALDEF
Trigger: GAACTCATCTAAAGCCGCCCAAGCCCCATCTCCGTG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACGGAGATGGGGCTTaGGCGGCTTTAGATGAGTTC +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLHGDGA*AALDEF
Trigger: GAACTCATCTAAAGCCGCCCAAGCCCCATCTCCGTG...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTGGCCGCCATCTGGTaGATGCGCTGTGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNLAAIW*MRCGML
Trigger: CAGCATCCCACAGCGCATCCACCAGATGGCGGCCAA...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACCAGTGCAGGCCCTGTTaGGAGTACTGGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNQCRPC*EYWTRC
Trigger: GCACCTGGTCCAGTACTCCCAACAGGGCCTGCACTG...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAGACCAGAGCCCACTCTaGCCCCAGGGTGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKDQSPL*PQGEVP
Trigger: AGGGACCTCACCCTGGGGCCAGAGTGGGCTCTGGTC...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCTGTTGAGCCTTCACTaGGACACTGGGAGCGTGCAT +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLLLSLH*DTGSVH
Trigger: ATGCACGCTCCCAGTGTCCCAGTGAAGGCTCAACAG...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CTCACAGTTCCACATGGCTGGGGAGGCCTCAGGACACTTACAATCATGGCGGAAACTCACAGTTCCACATaGCTGGGGAGGCCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: LTVPHGWGGLRTLTIMAETHSST*LGRPQD
Trigger: GTCCTGAGGCCTCCCCAGCCATGTGGAACTGTGAGT...TTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCCAGCCATGTGGAACTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
3UTR CAA 72 bp CTGCGAGGCATATCATCGAAGACAAGTTTCTGCCTCTaGCAGTCCCTGTGGCCGTTGGAGCCTGGAGACCAC +
Preference number: 4 (lower is better)
Translates to: LRGISSKTSFCL*QSLWPLEPGDH
Trigger: GTGGTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAGGCAGAAACTTGTCTTCGATGATATGCCTCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
CDS-3UTR TCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTGGTGGTCCTGGCGTTaGTGGAGCCTACAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPWWSWR*WSLQGP
Trigger: GGGCCCCTGTAGGCTCCATCAACGCCAGGACCACCA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR TCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATTTGGAGAGGCTGCCCTaGGACCCCACGGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHLERLP*DPTELA
Trigger: CGCCAGCTCCGTGGGGTCTCAGGGCAGCCTCTCCAA...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp AATGCAGCCAGTTGTTTGTCTTCTGGTGTGGCATTGGGGCCTGAGTGGGTTTTTAGGGTGAGGTCCCTATaGCAGGTGGGCGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: NAASCLSSGVALGPEWVFRVRSL*QVGAVP
Trigger: CGGAACAGCGCCCACCTGTCATAGGGACCTCACCCT...AAAAACCCACTCAGGCCCCAATGCCACACCAGAAGACAAACAACTGGCTGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671937.1
CDS-3UTR TCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACGGCGGGACAATCACTTaGACCCAGGAGGCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNGGTIT*TQEAED
Trigger: ATCCTCTGCCTCCTGGGTTCAAGTGATTGTCCCGCC...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCAAGAACTACACGCTCTaGCCACTGCCCACAACGGTA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAKNYTL*PLPTTV
Trigger: TACCGTTGTGGGCAGTGGTCAGAGCGTGTAGTTCTT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CTCACAGTTCCACATGGCTGGGGAGGCCTCAGGACACTTACAATCATGGCGGAAAATCATGGCGGAAGGTaGAGGGGAAGCAAGGCACGT +
Preference number: 4 (lower is better)
Translates to: LTVPHGWGGLRTLTIMAENHGGR*RGSKAR
Trigger: ACGTGCCTTGCTTCCCCTTCACCTTCCGCCATGATT...TTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCCAGCCATGTGGAACTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR GCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCTGTCGACTTCAAACTTaGCGCCCGTCTCCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGCRLQT*RPSPVW
Trigger: CCAGACCGGAGACGGGCGGCAAGTTTGAAGTCGACA...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317233.8
ENST00000672756.2
CDS-3UTR GCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGACCTCTCTTACTCTGCTaGACGGGGACAGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGPLLLC*TGTAAG
Trigger: ACCAGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGG...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCAGAGCCCTGTTGTGTTaGTCTCTGTTGGCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLARALLC*SLLAVR
Trigger: TCTGACGGCCAACAGAGAGCAACACAACAGGGCTCT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp CCCTTCCTGCTGGGCTTTAAGCCAGTTGATACCACAGTGGCTGGCGCAACTCTGAGAGCCCTGTTGTGTTaGTCTCTGTTGGCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: PFLLGFKPVDTTVAGATLRALLC*SLLAVR
Trigger: TCTGACGGCCAACAGAGAGCAACACAACAGGGCTCT...CAGAGTTGCGCCAGCCACTGTGGTATCAACTGGCTTAAAGCCCAGCAGGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp AGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCTGTCCGCTGCTGCTGTaGTTGGCCGCCATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SATRRPQFFLHRGNLPFLCPLLL*LAAMAG
Trigger: ACCTGCCATGGCGGCCAAGCACAGCAGCAGCGGACA...GAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAGAACACAGTGTCCGCTaGTGCTGTGCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEEHSVR*CCAWPP
Trigger: TGGCGGCCAAGCACAGCAGCAGCGGACACTGTGTTC...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGCTGCTGCTGCTGCTaGTGCCCTTGCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHCCCCC*CPCWKA
Trigger: TGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAAGAGGGTACTCCTCCTaGTCGGACTCCAGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQRGYSS*SDSRSE
Trigger: CTCCGACCTGGAGTCCGAGCAGGAGGAGTACCCTCT...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACAGAGGGTACTCCTCCTaGTCGGACTCCAGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHRGYSS*SDSRSE
Trigger: CTCCGACCTGGAGTCCGAGCAGGAGGAGTACCCTCT...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAGAGTACTGGACCAGGTaGTCCATGCTGCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGEYWTR*SMLLCR
Trigger: CCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTC...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAACTGTTCCGCAGCCAGTaGAGGCCCTGTTGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDELFRSQ*RPCWEY
Trigger: GTACTCCCAACAGGGCCTGCACTGGCTGCGGAACAG...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAACTGTTCCGCAGCCAGTaGAGGCCCTGTTGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQLFRSQ*RPCWEY
Trigger: GTACTCCCAACAGGGCCTGCACTGGCTGCGGAACAG...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGCTGCAGACTGAATGCTaGTGCATCCCAGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: GTGMRKQVISTIPAVGSRLQTEC*CIPGLR
Trigger: TCTGAGCCCTGGGATGCAGCAGCATTCAGTCTGCAG...CCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGAGGAACCCCAGGTTTaGGAACTCCAACGAGATGAC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAEEPQV*ELQRDD
Trigger: GTCATCTCGTTGGAGTTCCCAAACCTGGGGTTCCTC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp ATTCCTTCCCAGGAGCATCCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCCATTGCACACTTGTTTaGCCCGAGGCTGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: IPSQEHPGRVPLGDHSSSHCTLV*PEAAVC
Trigger: GCAGACAGCAGCCTCGGGCCAAACAAGTGTGCAATG...GGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGGATGCTCCTGGGAAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGGCCGCCATGGCAGGTaGCCTCTCCTGGGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNGRHGR*PLLGLK
Trigger: CTTCAGACCCAGGAGAGGCCACCTGCCATGGCGGCC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTGGGCCGCCATGGCAGGTaGCCTCTCCTGGGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: ETTVLPAQRKPSISPQRLGRHGR*PLLGLK
Trigger: CTTCAGACCCAGGAGAGGCCACCTGCCATGGCGGCC...CAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp CCCTTCCTGCTGGGCTTTAAGCCAGTTGATACCACAGTGGCTGGCGCAACTCTGTCTGCTGGACCAGGCTaGGTTTTGAAGCTAGGGATG +
Preference number: 4 (lower is better)
Translates to: PFLLGFKPVDTTVAGATLSAGPG*VLKLGM
Trigger: CATCCCTAGCTTCAAAACCCAGCCTGGTCCAGCAGA...CAGAGTTGCGCCAGCCACTGTGGTATCAACTGGCTTAAAGCCCAGCAGGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGCGGTCGGTTTCTGCTaGACCAGGCTGGGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: FHMAGEASGHLQSWRKVKAVGFC*TRLGFE
Trigger: TTCAAAACCCAGCCTGGTCCAGCAGAAACCGACCGC...CTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCCAGCCATGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp ATTCCTTCCCAGGAGCATCCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCGCGGTCGGTTTCTGCTaGACCAGGCTGGGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: IPSQEHPGRVPLGDHSSSAVGFC*TRLGFE
Trigger: TTCAAAACCCAGCCTGGTCCAGCAGAAACCGACCGC...GGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGGATGCTCCTGGGAAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GGGAAGCAAGGCACGTCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGTTTCAGGCTCCGGCTTGCTaGCAGGGACTCCCCTGTATG +
Preference number: 4 (lower is better)
Translates to: GKQGTSCRRSDVAENTGFQAPAC*QGLPCM
Trigger: CATACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTG...AAACCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGACGTGCCTTGCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp AGTCATGGGGAGTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATATGGAGAGCTTGGCCTTaGCTCTGGCAGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SHGEWSLGFSQRSTPHWIWRAWP*LWQAPA
Trigger: AGCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCA...TATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCACTCCCCATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCAATAGCAGAAAGTGGTaGAAGCCAGGTCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: GEASGHLQSWRKVKGKQGNSRKW*KPGHLP
Trigger: CGGGAGATGACCTGGCTTCCACCACTTTCTGCTATT...GCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp GAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCACGCGATGTGCCATTGTCTaGACTCTCTGGCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: EASGHLQSWRKVKGKQGTRCAIV*TLWLCI
Trigger: GATGCAGAGCCAGAGAGTCCAGACAATGGCACATCG...CGTGCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATTGCCCTCACTCTCGCTaGAGCTGCTCTCGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYCPHSR*SCSRSP
Trigger: CGGAGACCGAGAGCAGCTCCAGCGAGAGTGAGGGCA...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCCTTCTCTCTCAGGCTaGGCTGGCAAACGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHPSLSG*AGKRRG
Trigger: TCCCCGACGTTTGCCAGCCCAGCCTGAGAGAGAAGG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTATCTCGGTGCGCCTGGTaGGCTTCTTGCCCGCGGACC +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVSRCAW*ASCPRT
Trigger: GGTCCGCGGGCAAGAAGCCCACCAGGCGCACCGAGA...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCGACCACTGCCCCCGTTaGCAGCGGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIDHCPR*QRPPSA
Trigger: GGCTGAAGGAGGCCGCTGCCAACGGGGGCAGTGGTC...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAACTGGGGCAGGTGTTCTaGGATCCTGGACAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDELGQVF*DPGQEG
Trigger: ACCCTCCTGTCCAGGATCCCAGAACACCTGCCCCAG...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCCTGGGGCAGGTGTTCTaGGATCCTGGACAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETLGQVF*DPGQEG
Trigger: ACCCTCCTGTCCAGGATCCCAGAACACCTGCCCCAG...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGGGCAGGTGTTCTaGGATCCTGGACAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTLGQVF*DPGQEG
Trigger: ACCCTCCTGTCCAGGATCCCAGAACACCTGCCCCAG...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCCGCTCTCAGAGTCCTTaGTGGCAGGGGCGCTCAATA +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGRSQSP*WQGRSI
Trigger: TATTGAGCGCCCCTGCCACCAAGGACTCTGAGAGCG...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAGTGGCCGTTGGAGCCTaGAGACCACGGCTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKVAVGA*RPRLRL
Trigger: CAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCAC...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTCTTGCAGTCCCTGTaGCCGTTGGAGCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTLLQSL*PLEPGD
Trigger: GTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAG...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCTCTTGCAGTCCCTGTaGCCGTTGGAGCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLLQSL*PLEPGD
Trigger: GTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTACAGGGCGCTGGCGTTaGAGAGGCTGCCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPTGRWR*RGCPET
Trigger: GGTCTCAGGGCAGCCTCTCCAACGCCAGCGCCCTGT...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACGGGGACAGGGCGCTaGCGTTGGAGAGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLITGTGR*RWRGCP
Trigger: AGGGCAGCCTCTCCAACGCCAGCGCCCTGTCCCCGT...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTTGGCCGCCATCTGGTaGATGCGCTGTGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLAAIW*MRCGML
Trigger: CAGCATCCCACAGCGCATCCACCAGATGGCGGCCAA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACAGGAGGGCCAGGCATCGGTAACATAATGCAGCCAGTTGTTTGTCTTCTGGTGCAGTGCAGGCCCTGTTaGGAGTACTGGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: TGGPGIGNIMQPVVCLLVQCRPC*EYWTRC
Trigger: GCACCTGGTCCAGTACTCCCAACAGGGCCTGCACTG...CACCAGAAGACAAACAACTGGCTGCATTATGTTACCGATGCCTGGCCCTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCTGCACCCCTCTGCCTaGTTAATGAGGACTCAACTG +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLLHPSA*LMRTQL
Trigger: CAGTTGAGTCCTCATTAACCAGGCAGAGGGGTGCAG...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CACTTTGCCAGGTGCTTGAATAGCAGAAAGTGGTGGAAGCCAGGTCATCTCCTGTGTACACCCTGGCCCTaGGAGCGCAGGCTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: HFARCLNSRKWWKPGHLLCTPWP*ERRLSL
Trigger: CAAACTGAGCCTGCGCTCCCAGGGCCAGGGTGTACA...CAGGAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CAA 72 bp TGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTaGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: WLGVSVAQCPKT*SHLWRPEPTLA
Trigger: GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGTCTGGAAAGGCAGGTaGTCAGCTCTCAGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQVWKGR*SALSSR
Trigger: ACGGGAGCTGAGAGCTGATCACCTGCCTTTCCAGAC...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317233.8
CDS-3UTR TCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAAGGGACTCCCCTGTATaGTGTGCAGTGCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQRDSPV*CAVHAG
Trigger: ACCAGCGTGCACTGCACATCATACAGGGGAGTCCCT...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACCCTGCTTGGGGATGCTaGACTTGGAGAGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHPAWGC*TWRAWP
Trigger: AGGCCAAGCTCTCCAAGTTCAGCATCCCCAAGCAGG...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CACTTTGCCAGGTGCTTGAATAGCAGAAAGTGGTGGAAGCCAGGTCATCTCCTGCCTGCTTGGGGATGCTaGACTTGGAGAGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: HFARCLNSRKWWKPGHLLPAWGC*TWRAWP
Trigger: AGGCCAAGCTCTCCAAGTTCAGCATCCCCAAGCAGG...CAGGAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCCGGAGAGCCGTTCTCTaGGCTGCCTGCTGTTCATTC +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETRRAVL*AACCSF
Trigger: GAATGAACAGCAGGCAGCTCAGAGAACGGCTCTCCG...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCGGAGAGCCGTTCTCTaGGCTGCCTGCTGTTCATTC +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTRRAVL*AACCSF
Trigger: GAATGAACAGCAGGCAGCTCAGAGAACGGCTCTCCG...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCGGCGCCGTCCCCGGCTaGGGTCCTCTCGGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCGAVPG*GPLGAP
Trigger: AGGCGCACCGAGAGGACCTCAGCCGGGGACGGCGCC...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCTGGTGGTCCTGGCGTTaGTGGAGCCTACAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIWWSWR*WSLQGP
Trigger: GGGCCCCTGTAGGCTCCATCAACGCCAGGACCACCA...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGCATCAGAGAGGGGTaGGATGGGCGACCGAAGCAT +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHCIREG*DGRPKH
Trigger: ATGCTTCGGTCGCCCATCTCACCCCTCTCTGATGCA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGGTGAGGTCTCCGCCGTaGGGCTGCAGCTGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLVRSPP*GCSWLS
Trigger: CGACAGCCAGCTGCAGCCTCACGGCGGAGACCTCAC...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCTTCGTCTGCGGCCGTaGCTTGTGGAGGGGAATGTT +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLRLRP*LVEGNV
Trigger: AACATTCCCCTCCACAAGTCACGGCCGCAGACGAAG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAACTTCGTCTGCGGCCGTaGCTTGTGGAGGGGAATGTT +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDELRLRP*LVEGNV
Trigger: AACATTCCCCTCCACAAGTCACGGCCGCAGACGAAG...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTGCGCTGTGGGATGCTaGCGATGGTCGACGGGGACA +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPCAVGC*RWSTGT
Trigger: TGTCCCCGTCGACCATCGTCAGCATCCCACAGCGCA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCCTGAGGTCAGGAGTTTaGGACGAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGLRSGV*DEPGQH
Trigger: ATGTTGGCCAGGCTCGTCTCAAACTCCTGACCTCAG...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTTCTAAATCATATGTGTaGAACTTTCTCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGSKSYV*NFLSAP
Trigger: GGGAGCTGAGAGAAAGTTTCACACATATGATTTAGA...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672756.2
CDS-3UTR TCA 90 bp ATTCCTTCCCAGGAGCATCCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGGCTGGCGCAACTCTaGAGTGTGCATGTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: IPSQEHPGRVPLGDHSSSWLAQL*SVHVQS
Trigger: ACTCTGAACATGCACACTTCAGAGTTGCGCCAGCCA...GGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGGATGCTCCTGGGAAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp CCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCTCCCAGATGAAGAGCTaGTTCCTTCCCAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: PGRVPLGDHSSSCTEETFSQMKS*FLPRSI
Trigger: GATGCTCCTGGGAAGGAATCAGCTCTTCATCTGGGA...GAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATATTTATGTCCTTCCGTCAGAGGGTGGGTaGCCAGCCTTCTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VVFGLFSKEYTALDIYVLPSEGG*PAFCQP
Trigger: GGGCTGGCAGAAGGCTGGGCACCCACCCTCTGACGG...AAGGACATAAATATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTATGTCCGCTGCTGCTGTaGTTGGCCGCCATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLCPLLL*LAAMAG
Trigger: ACCTGCCATGGCGGCCAAGCACAGCAGCAGCGGACA...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACTGTCCGCTGCTGCTGTaGTTGGCCGCCATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNCPLLL*LAAMAG
Trigger: ACCTGCCATGGCGGCCAAGCACAGCAGCAGCGGACA...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp AACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGCTTACGCGGTCGGTTTCTaGTGGACCAGGCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: NWHEEASYFHHSGSGLQAYAVGF*WTRLGF
Trigger: AAAACCCAGCCTGGTCCAGCAGAAACCGACCGCGTA...AGCCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGTTCCACTTTGCCAGGTaGTTGAATAGCAGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQFHFAR*LNSRKW
Trigger: CCACTTTCTGCTATTCAAGCACCTGGCAAAGTGGAA...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGGTTCTGCAGTTGGGCTaGTGGACCACGGCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRVLQLG*WTTALS
Trigger: TGACAGCGCCGTGGTCCAGCAGCCCAACTGCAGAAC...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGTGCTGCTGCTGCTGCTaGTGCCCTTGCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRCCCCC*CPCWKA
Trigger: TGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCA...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAGCGGGCGGGGACTTCTaGTTCACGCCTTTACTCCCA +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKAGGDF*FTPLLP
Trigger: TGGGAGTAAAGGCGTGAAGCAGAAGTCCCCGCCCGC...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGGCTCGCTCTGTTGTTaGCACAGGGCCTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTGSLCC*HRAWFW
Trigger: CCAAAACCAGGCCCTGTGGCAACAACAGAGCGAGCC...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGCTCGCTCTGTTGTTaGCACAGGGCCTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQGSLCC*HRAWFW
Trigger: CCAAAACCAGGCCCTGTGGCAACAACAGAGCGAGCC...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGGTGTGGCTGGGCGGTaGGCTCTCAGAGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNGVAGR*ALRVLG
Trigger: ACCAAGGACTCTGAGAGCGCACCGCCCAGCCACACC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACTGCTCCATGCTGCTGTaGAGGGTGACCGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNCSMLL*RVTGPM
Trigger: CATGGGGCCGGTCACCCTGCACAGCAGCATGGAGCA...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGAGTACTGGACCAGGTaGTCCATGCTGCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHEYWTR*SMLLCR
Trigger: CCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATCTGTTCCGCAGCCAGTaGAGGCCCTGTTGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNLFRSQ*RPCWEY
Trigger: GTACTCCCAACAGGGCCTGCACTGGCTGCGGAACAG...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAGGAAGAGGCTCTGGTTaGTGCTGCCCCAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGGRGSG*CCPRKE
Trigger: TTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCC...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCATGTGCATACGTGCATaGATGTGCGCGCGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGMCIRA*MCARVC
Trigger: GCACACACGCGCGCACATGCATGCACGTATGCACAT...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCGCATTCCCATCTGCGTaGCCTGGTAAGCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PGRVPLGDHSSSCTEETFAFPSA*PGKLLQ
Trigger: TTGGAGAAGCTTACCAGGGCACGCAGATGGGAATGC...GAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCGGAAGGGGGACAAACTaGCCTCTGGGTGTCGACTTC +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETGRGTN*PLGVDF
Trigger: GAAGTCGACACCCAGAGGCCAGTTTGTCCCCCTTCC...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGTTGCCTAAAGTGTTCTaGATCCGGTTGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQLPKVF*IRLESS
Trigger: TGAACTCTCCAACCGGATCCAGAACACTTTAGGCAA...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CACTTTGCCAGGTGCTTGAATAGCAGAAAGTGGTGGAAGCCAGGTCATCTCCTGTGTGTTGCTCTCTGTTaGCCGTCAGAGGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: HFARCLNSRKWWKPGHLLCVALC*PSEGGC
Trigger: GCACCCACCCTCTGACGGCCAACAGAGAGCAACACA...CAGGAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAATGTGTTGCTCTCTGTTaGCCGTCAGAGGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDECVALC*PSEGGC
Trigger: GCACCCACCCTCTGACGGCCAACAGAGAGCAACACA...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATGTGCTTGGCCGCCATaGCAGGTGGCCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGCAWPP*QVASPG
Trigger: CCCAGGAGAGGCCACCTGCCATGGCGGCCAAGCACA...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CAAGGCACGTCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGTTTCAATGGTGGAGAGCTTGGCCTTaGCTCTGGCAGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: QGTSCRRSDVAENTGFQWWRAWP*LWQAPA
Trigger: AGCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCA...CCATTGAAACCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGACGTGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAATGCTGCTGCCCTTGCTaGAAGGCACCGAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKCCCPC*KAPRFC
Trigger: GCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCA...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTATGCCCTCACTCTCGCTaGAGCTGCTCTCGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLCPHSR*SCSRSP
Trigger: CGGAGACCGAGAGCAGCTCCAGCGAGAGTGAGGGCA...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAACCTTCTCTCTCAGGCTaGGCTGGCAAACGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKPSLSG*AGKRRG
Trigger: TCCCCGACGTTTGCCAGCCCAGCCTGAGAGAGAAGG...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCCTCTCGGTGCGCCTaGTGGGCTTCTTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLSSRCA*WASCPR
Trigger: CCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGA...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATCGCAGCTCCTTGCGGTaGCTCGCTCTGTTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNRSSLR*LALLLP
Trigger: TGGCAACAACAGAGCGAGCCACCGCAAGGAGCTGCG...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGGTGTTCTGGGATCCTaGACAGGAGGGTCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHGVLGS*TGGSGR
Trigger: TCGACCTGACCCTCCTGTCCAGGATCCCAGAACACC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAACTGGGGCAGGTGTTCTaGGATCCTGGACAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKLGQVF*DPGQEG
Trigger: ACCCTCCTGTCCAGGATCCCAGAACACCTGCCCCAG...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGGCGCTCAATACCCCTaGCTCCTGGGGCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNGAQYP*LLGQVF
Trigger: GAACACCTGCCCCAGGAGCCAGGGGTATTGAGCGCC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTGGCCGTTGGAGCCTaGAGACCACGGCTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNVAVGA*RPRLRL
Trigger: CAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCAC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCTTCTGGTGTGGCATTaGGGCCTGAGTGGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLLLVWH*GLSGFL
Trigger: TAAAAACCCACTCAGGCCCCAATGCCACACCAGAAG...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCTGGTGGATGCGCTGTaGGATGCTGACGATGGTCGA +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLVDAL*DADDGR
Trigger: TCGACCATCGTCAGCATCCCACAGCGCATCCACCAG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAACTGGTGGATGCGCTGTaGGATGCTGACGATGGTCGA +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDELVDAL*DADDGR
Trigger: TCGACCATCGTCAGCATCCCACAGCGCATCCACCAG...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATTTGGCCGCCATCTGGTaGATGCGCTGTGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYLAAIW*MRCGML
Trigger: CAGCATCCCACAGCGCATCCACCAGATGGCGGCCAA...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCCCCTGTTGGGAGTACTaGACCAGGTGCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETPCWEY*TRCSML
Trigger: CAGCATGGAGCACCTGGTCCAGTACTCCCAACAGGG...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCCCTGTTGGGAGTACTaGACCAGGTGCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHPCWEY*TRCSML
Trigger: CAGCATGGAGCACCTGGTCCAGTACTCCCAACAGGG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCCCTGTTGGGAGTACTaGACCAGGTGCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTPCWEY*TRCSML
Trigger: CAGCATGGAGCACCTGGTCCAGTACTCCCAACAGGG...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCGACCAGAGCCCACTCTaGCCCCAGGGTGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIDQSPL*PQGEVP
Trigger: AGGGACCTCACCCTGGGGCCAGAGTGGGCTCTGGTC...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCACGTTGAGCCATCTGTaGAGACCAGAGCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGTLSHL*RPEPTL
Trigger: CAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGT...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGTAATCACAACACTTTaGGAGGTGGAGGCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNVITTL*EVEAGR
Trigger: TCTACCCGCCTCCACCTCCCAAAGTGTTGTGATTAC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAGGCCCACCTGTCAAATaGGGCTTCACAGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEGPPVK*GFTGKL
Trigger: GAGCTTCCCTGTGAAGCCCCATTTGACAGGTGGGCC...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCAAAATTAGCCGGGTGTaGTGGCACGTGCCTATCTTC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAKISRV*WHVPIF
Trigger: GAAGATAGGCACGTGCCACCACACCCGGCTAATTTT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACTCAAACTGTGAGCAGTaGTTGTCTCAGGCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNSNCEQ*LSQAEG
Trigger: CCCTTCTGCCTGAGACAACCACTGCTCACAGTTTGA...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCAACACAGGGTTTCAATaGTCAGTGGAGCTGAGACAG +
Preference number: 4 (lower is better)
Translates to: GEASGHLQSWRKVKGKQGNTGFQ*SVELRQ
Trigger: CTGTCTCAGCTCCACTGACCATTGAAACCCTGTGTT...GCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCACTTTGCCAGGTGCTTaGATAGCAGAAAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLATLPGA*IAESGG
Trigger: TCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGGAGGTGGCCAGTCTTaGAGAGCTGTCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHGGGQS*RAVFLS
Trigger: GGAGAGAAAGACAGCTCTTCAAGACTGGCCACCTCC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAATGCATCAGAGAGGGGTaGGATGGGCGACCGAAGCAT +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKCIREG*DGRPKH
Trigger: ATGCTTCGGTCGCCCATCTCACCCCTCTCTGATGCA...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCAGCGTGGTCCCTTTTaGGTCGAAACATCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHQRGPF*VETSAS
Trigger: ACTGGCGGATGTTTCGACTCAAAAGGGACCACGCTG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCCAGCGTGGTCCCTTTTaGGTCGAAACATCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETQRGPF*VETSAS
Trigger: ACTGGCGGATGTTTCGACTCAAAAGGGACCACGCTG...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCAGCGTGGTCCCTTTTaGGTCGAAACATCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTQRGPF*VETSAS
Trigger: ACTGGCGGATGTTTCGACTCAAAAGGGACCACGCTG...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCTGCGCTGTGGGATGCTaGCGATGGTCGACGGGGACA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLICAVGC*RWSTGT
Trigger: TGTCCCCGTCGACCATCGTCAGCATCCCACAGCGCA...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAACTCTGGCCCCAGGGTaGGGTCCCTATGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGTLAPG*GPYDRW
Trigger: CCACCTGTCATAGGGACCTCACCCTGGGGCCAGAGT...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCCCAGGGCTACTGGTTaGACAGGAACCCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPPRATG*TGTLWP
Trigger: TGGCCACAGGGTTCCTGTTCAACCAGTAGCCCTGGG...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTCCCAGGGCTACTGGTTaGACAGGAACCCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTPRATG*TGTLWP
Trigger: TGGCCACAGGGTTCCTGTTCAACCAGTAGCCCTGGG...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTTGGAGAGGCTGCCCTaGGACCCCACGGAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPLERLP*DPTEFP
Trigger: TGGAAACTCCGTGGGGTCTCAGGGCAGCCTCTCCAA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445815.2
ENST00000671937.1
CDS-3UTR TCA 90 bp AGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCGCATGTTCAGAGTCCTaGGTCCCTAGACCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SATRRPQFFLHRGNLPFLACSES*VPRPWA
Trigger: TGCCCAGGGTCTAGGGACTCAGGACTCTGAACATGC...GAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp ATTCCTTCCCAGGAGCATCCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTCCACAACGTTTGCTTaGTCCTACTTGACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: IPSQEHPGRVPLGDHSSSSTTFA*SYLTPG
Trigger: GCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGA...GGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGGATGCTCCTGGGAAGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp CCCTTCCTGCTGGGCTTTAAGCCAGTTGATACCACAGTGGCTGGCGCAACTCTGGAGAGGGAACTGGCATaGGGAAGCAAGTTATTTCCA +
Preference number: 4 (lower is better)
Translates to: PFLLGFKPVDTTVAGATLERELA*GSKLFP
Trigger: TGGAAATAACTTGCTTCCTCATGCCAGTTCCCTCTC...CAGAGTTGCGCCAGCCACTGTGGTATCAACTGGCTTAAAGCCCAGCAGGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCCTCTCTTACTCTGCTaGACGGGGACAGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYPLLLC*TGTAAG
Trigger: ACCAGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGG...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGCCCACCTCCACATTaGACACTTGTTTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNGPPPH*TLVWPE
Trigger: CTCGGGCCAAACAAGTGTGCAATGTGGAGGTGGGCC...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCACACAGTGTCCGCTGCTaGTGTGCTTGGCCGCCATGG +
Preference number: 4 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSHSVRC*CAWPPW
Trigger: CCATGGCGGCCAAGCACAGCAGCAGCGGACACTGTG...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCCACAGTGTCCGCTGCTaGTGTGCTTGGCCGCCATGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIHSVRC*CAWPPW
Trigger: CCATGGCGGCCAAGCACAGCAGCAGCGGACACTGTG...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCTCCCCTGTATGATGTaGAGTGCACGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLPCMM*SARWFP
Trigger: CGGAAACCAGCGTGCACTGCACATCATACAGGGGAG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAACTCCCCTGTATGATGTaGAGTGCACGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQLPCMM*SARWFP
Trigger: CGGAAACCAGCGTGCACTGCACATCATACAGGGGAG...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGAAGGCACCGAGGTTCTaGAGTTGGGCTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRKAPRF*SWAAGP
Trigger: TGGTCCAGCAGCCCAACTGCAGAACCTCGGTGCCTT...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATAAGGCACCGAGGTTCTaGAGTTGGGCTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNKAPRF*SWAAGP
Trigger: TGGTCCAGCAGCCCAACTGCAGAACCTCGGTGCCTT...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTGCTGCTGCTGCTGCTaGTGCCCTTGCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPCCCCC*CPCWKA
Trigger: TGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGCTGTCCTTGGCCTTTaGTCCTCCTTGCAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHAVLGL*SSLQVL
Trigger: GAGCACTTGCAAGGAGGAGCAAAGGCCAAGGACAGC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTGCGGGCGGGGACTTCTaGTTCACGCCTTTACTCCCA +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPAGGDF*FTPLLP
Trigger: TGGGAGTAAAGGCGTGAAGCAGAAGTCCCCGCCCGC...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTGCCTGGTGGGCTTCTTaGCCGCGGACCTCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLAWWAS*PRTSGQ
Trigger: CTGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGC...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTGCTTAGCCCCCGCGTaGGGCGCTTCTCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLCLAPA*GASRRS
Trigger: TGACCTGCGAGAAGCGCCGCACGCGGGGGCTAAGCA...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGTGGCGTTGGAGAGGCTaGCCTGAGACCCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQWRWRG*PETPRS
Trigger: GCTCCGTGGGGTCTCAGGGCAGCCTCTCCAACGCCA...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTTGGCGTTGGAGAGGCTaGCCTGAGACCCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVWRWRG*PETPRS
Trigger: GCTCCGTGGGGTCTCAGGGCAGCCTCTCCAACGCCA...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTTGGCGTTGGAGAGGCTaGCCTGAGACCCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIWRWRG*PETPRS
Trigger: GCTCCGTGGGGTCTCAGGGCAGCCTCTCCAACGCCA...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCTGCTCCATGCTGCTGTaGAGGGTGACCGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLICSMLL*RVTGPM
Trigger: CATGGGGCCGGTCACCCTGCACAGCAGCATGGAGCA...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCAGATTGGCTGACAAATaGCATGTGGCTCTACAGCCA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLARLADK*HVALQP
Trigger: TGGCTGTAGAGCCACATGGCATTTGTCAGCCAATCT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAAGAGGCTCTGGTTGCTaGTGCCCCAGAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQRGSGC*CPRKEL
Trigger: CAGTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCT...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTAGAGGCTCTGGTTGCTaGTGCCCCAGAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTRGSGC*CPRKEL
Trigger: CAGTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCT...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGGCTCTGGTTGCTaGTGCCCCAGAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETRGSGC*CPRKEL
Trigger: CAGTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTACCAGGAGGCAGAGGATaGAGTGAGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLPGGRG*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCATCCTCTGCCTCCTGG...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACAACGTGCTCCACACGTaGTCCACAGATGAAACAAGA +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNNVLHT*STDETR
Trigger: TCTTGTTTCATCTGTGGAGCACGTGTGGAGCACGTT...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACATGTGCATACGTGCATaGATGTGCGCGCGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHMCIRA*MCARVC
Trigger: GCACACACGCGCGCACATGCATGCACGTATGCACAT...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAACTGGGAGCGTGCATGTaGATACGTGCATGCATGTGC +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDELGACM*IRACMC
Trigger: GCACATGCATGCACGTATGCACATGCACGCTCCCAG...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGACGTTCTTGAAAGACTaGTGGGTGTTTCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQTFLKD*WVFLST
Trigger: TGTGCTAAGAAACACCCAGCAGTCTTTCAAGAACGT...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTATGGCGTTGGAGAGGCTaGCCTGAGACCCCACGGAGT +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVWRWRG*PETPRS
Trigger: ACTCCGTGGGGTCTCAGGGCAGCCTCTCCAACGCCA...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
CDS-3UTR CCA 90 bp GCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGAATATTTACAGAAGACGCTGCTGCTGTGCTTaGCCGCCATGGCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ANCEGSDSRASGRNIYRRRCCCA*PPWQVA
Trigger: GGCCACCTGCCATGGCGGCCAAGCACAGCAGCAGCG...TCTTCTGTAAATATTCCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAATCTTGGCCGTCCATTaGCCTCACATACGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKILAVH*PHIRGR
Trigger: CCGACCGCGTATGTGAGGCCAATGGACGGCCAAGAT...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTATGCTCTCTGAGTCGCTaGAGGAGCTGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVCSLSR*RSCCCR
Trigger: GCGGCAGCAGCAGCTCCTCCAGCGACTCAGAGAGCA...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCCACGGTCTGTGCTTTaGACAGAGGGTACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHPRSVL*TEGTPP
Trigger: AGGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGTGTTCTGGGATCCTaGACAGGAGGGTCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNGVLGS*TGGSGR
Trigger: TCGACCTGACCCTCCTGTCCAGGATCCCAGAACACC...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTACTGGGGCAGGTGTTCTaGGATCCTGGACAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLLGQVF*DPGQEG
Trigger: ACCCTCCTGTCCAGGATCCCAGAACACCTGCCCCAG...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCTGTCCGAGGTGTGGCTaGGCGGTGCGCTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLICPRCG*AVRSQS
Trigger: ACTCTGAGAGCGCACCGCCCAGCCACACCTCGGACA...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGTTTGTCTTCTGGTGTaGCATTGGGGCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTVCLLV*HWGLSG
Trigger: CCCACTCAGGCCCCAATGCCACACCAGAAGACAAAC...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGGGGAGACATGGGGGATaGGGTTCCAGTGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRGRHGG*GSSALS
Trigger: GGAAAGAGCACTGGAACCCCATCCCCCATGTCTCCC...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTACAGGGCGCTGGCGTTaGAGAGGCTGCCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIITGRWR*RGCPET
Trigger: GGTCTCAGGGCAGCCTCTCCAACGCCAGCGCCCTGT...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAACGGGGACAGGGCGCTaGCGTTGGAGAGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKTGTGR*RWRGCP
Trigger: AGGGCAGCCTCTCCAACGCCAGCGCCCTGTCCCCGT...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACACGGGGACAGGGCGCTaGCGTTGGAGAGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDTGTGR*RWRGCP
Trigger: AGGGCAGCCTCTCCAACGCCAGCGCCCTGTCCCCGT...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACTGGTTGGCCGCCATCTaGTGGATGCGCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNWLAAI*WMRCGM
Trigger: CATCCCACAGCGCATCCACCAGATGGCGGCCAACCA...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATTTGGTGATGCTGACGTaGTTGGCCGCCATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNLVMLT*LAAIWW
Trigger: CCACCAGATGGCGGCCAACCACGTCAGCATCACCAA...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACCAGTGCAGGCCCTGTTaGGAGTACTGGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNQCRPC*EYWTRC
Trigger: GCACCTGGTCCAGTACTCCCAACAGGGCCTGCACTG...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCGACCAGAGCCCACTCTaGCCCCAGGGTGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSDQSPL*PQGEVP
Trigger: AGGGACCTCACCCTGGGGCCAGAGTGGGCTCTGGTC...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCACGTTGAGCCATCTGTaGAGACCAGAGCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETTLSHL*RPEPTL
Trigger: CAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACACGTTGAGCCATCTGTaGAGACCAGAGCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHTLSHL*RPEPTL
Trigger: CAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGT...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACCAGGTCCATCTTCACTaGCAGTCAAGCTTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNQVHLH*QSSFWC
Trigger: ACACCAAAAGCTTGACTGCCAGTGAAGATGGACCTG...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCAGGTCCATCTTCACTaGCAGTCAAGCTTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAQVHLH*QSSFWC
Trigger: ACACCAAAAGCTTGACTGCCAGTGAAGATGGACCTG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACCATTTGCATACTACTTaGAGGTGGGGCTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNHLHTT*RWGWEG
Trigger: CCCTTCCCAGCCCCACCTCCAAGTAGTATGCAAATG...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACAGAAATGCATGTGGCTaGTGGGCTTGTTATCACAGG +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNRNACG*WACYHR
Trigger: CCTGTGATAACAAGCCCACCAGCCACATGCATTTCT...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCCTGACAAATGCCATGTaGCTCTACAGCCACCGAGTC +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGLTNAM*LYSHRV
Trigger: GACTCGGTGGCTGTAGAGCCACATGGCATTTGTCAG...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAGTGGCTCATGCACTTTaGGAGGCCGAGGCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKVAHAL*EAEAKG
Trigger: TCCTTTGGCCTCGGCCTCCCAAAGTGCATGAGCCAC...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CAA 72 bp AGAATGACAAGCAAAGCGGCATCCCAGGGCTACTGGTaGAACAGGAACCCTGTGGCCATTGAGATGACCTTC +
Preference number: 4 (lower is better)
Translates to: RMTSKAASQGYW*NRNPVAIEMTF
Trigger: GAAGGTCATCTCAATGGCCACAGGGTTCCTGTTCAACCAGTAGCCCTGGGATGCCGCTTTGCTTGTCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR CAA 72 bp CACAGAGGAAACCTTCCATTTCTCCACAACGTTTGCTaGATCCTACTTGACTCCAGGCCCTTCCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: HRGNLPFLHNVC*ILLDSRPFLLG
Trigger: GCCCAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCTGGTTCTGGGCTCTTaGATCTGCAACAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLALVLGS*ICNKMF
Trigger: GAACATTTTGTTGCAGATTCAAGAGCCCAGAACCAG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp CAAGGCACGTCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGTTTCAATGGAGGGACTCCCCTGTATaGTGTGCAGTGCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: QGTSCRRSDVAENTGFQWRDSPV*CAVHAG
Trigger: ACCAGCGTGCACTGCACATCATACAGGGGAGTCCCT...CCATTGAAACCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGACGTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCCGGAGCTGCTCTCTaGGTCGCTGGAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLSGAAL*VAGGAA
Trigger: AGCAGCTCCTCCAGCGACTCAGAGAGCAGCTCCGGA...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTGGCGCCGTCCCCGGCTaGGGTCCTCTCGGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: RISVNVYGSASSLSILCRGAVPG*GPLGAP
Trigger: AGGCGCACCGAGAGGACCTCAGCCGGGGACGGCGCC...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCGGCGCCGTCCCCGGCTaGGGTCCTCTCGGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGGAVPG*GPLGAP
Trigger: AGGCGCACCGAGAGGACCTCAGCCGGGGACGGCGCC...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAATGGTGGTCCTGGCGTTaGTGGAGCCTACAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKWWSWR*WSLQGP
Trigger: GGGCCCCTGTAGGCTCCATCAACGCCAGGACCACCA...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR TCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAACTCCCTGGGACTTCTTaGTCTCCCTGTAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDELPGTS*SPCSRL
Trigger: AAGACGACTACAGGGAGATCAAGAAGTCCCAGGGAG...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTTTGGAGAGGCTGCCCTaGGACCCCACGGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLLERLP*DPTELA
Trigger: CGCCAGCTCCGTGGGGTCTCAGGGCAGCCTCTCCAA...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGAGGGTGAGGTCCCTATaGCAGGTGGGCGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQRVRSL*QVGAVP
Trigger: CGGAACAGCGCCCACCTGTCATAGGGACCTCACCCT...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGATTCAGGCTCCTACTaGAGGGACAATCTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLDSGSY*RDNLGN
Trigger: ATTACCTAGATTGTCCCTTCAGTAGGAGCCTGAATC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTGGCGGGACAATCACTTaGACCCAGGAGGCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTGGTIT*TQEAED
Trigger: ATCCTCTGCCTCCTGGGTTCAAGTGATTGTCCCGCC...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCTGAGGTCAGGAGTTTaGGACGAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYLRSGV*DEPGQH
Trigger: ATGTTGGCCAGGCTCGTCTCAAACTCCTGACCTCAG...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAACTGCACTTCCAAGTTaGTGCGAACACGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGTALPS*CEHAVT
Trigger: AGTCACTGCGTGTTCGCATCAACTTGGAAGTGCAGT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAATTGTGTGCAGTTCCCTaGCTGCACACAAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDELCAVP*LHTSQG
Trigger: TCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAA...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATCACCCATCTCTGGGATaGGGAGTTCTCCATGGTGAC +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNHPSLG*GVLHGD
Trigger: GTCACCATGGAGAACTCCTCATCCCAGAGATGGGTG...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp ATTCCTTCCCAGGAGCATCCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCGAAACATATTCCTCCTaGGGGATGCAAGATCTCACC +
Preference number: 4 (lower is better)
Translates to: IPSQEHPGRVPLGDHSSSETYSS*GMQDLT
Trigger: GGTGAGATCTTGCATCCCTCAGGAGGAATATGTTTC...GGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGGATGCTCCTGGGAAGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp GGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGTGCGCTTGCAAATTGTaGAGGATCAGATTCACGTGC +
Preference number: 4 (lower is better)
Translates to: GTGMRKQVISTIPAVGSRCACKL*RIRFTC
Trigger: GCACGTGAATCTGATCCTTCACAATTTGCAAGCGCA...CCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp AGTCATGGGGAGTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATACTGCACGGGGACAGCTaGTGGTGTGGAAGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: SHGEWSLGFSQRSTPHWILHGDS*WCGSCS
Trigger: ACTACAACTTCCACACCAGCAGCTGTCCCCGTGCAG...TATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCACTCCCCATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTCCGTCAGAGGGTGGGTaGCCAGCCTTCTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIPSEGG*PAFCQP
Trigger: GGGCTGGCAGAAGGCTGGGCACCCACCCTCTGACGG...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACAGAGCCCTGTTGTGTTaGTCTCTGTTGGCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHRALLC*SLLAVR
Trigger: TCTGACGGCCAACAGAGAGCAACACAACAGGGCTCT...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCTGTTGTGTTaGTCTCTGTTGGCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETRALLC*SLLAVR
Trigger: TCTGACGGCCAACAGAGAGCAACACAACAGGGCTCT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATCTCCCCTGTATGATGTaGAGTGCACGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNLPCMM*SARWFP
Trigger: CGGAAACCAGCGTGCACTGCACATCATACAGGGGAG...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACTGGCAGGCTCCGGCTTaGTGGCAGGGACTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDWQAPA*WQGLPC
Trigger: ACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCA...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAATGGCAGGCTCCGGCTTaGTGGCAGGGACTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKWQAPA*WQGLPC
Trigger: ACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCA...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TGGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGTGGACTCTCTGGCTCTaGATCACCTTTCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: WGGLRTLTIMAEGEGEARWTLWL*ITFLWI
Trigger: AATCCAAAGAAAGGTGATGCAGAGCCAGAGAGTCCA...CCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGCCGTTCTCTGAGCTaGCTGCTGTTCATTCTCCTC +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETSRSLS*LLFILL
Trigger: GAGGAGAATGAACAGCAGGCAGCTCAGAGAACGGCT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTATGCTGCTGCTGCCCTTaGTGGAAGGCACCGAGGTTC +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVCCCCP*WKAPRF
Trigger: GAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCA...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTAAGTCAGATCCGGAGCTaGTCTCTGAGTCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLSQIRS*SLSRWR
Trigger: CCTCCAGCGACTCAGAGAGCAGCTCCGGATCTGACT...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTAGTCAGATCCGGAGCTaGTCTCTGAGTCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPSQIRS*SLSRWR
Trigger: CCTCCAGCGACTCAGAGAGCAGCTCCGGATCTGACT...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTACCACTTGTTAGAGGATaGCGGTTCAGCCTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLPLVRG*RFSLGA
Trigger: AGCCCCGAGGCTGAACCGGCATCCTCTAACAAGTGG...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCCACTTGTTAGAGGATaGCGGTTCAGCCTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPPLVRG*RFSLGA
Trigger: AGCCCCGAGGCTGAACCGGCATCCTCTAACAAGTGG...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACTGCTTAGCCCCCGCGTaGGGCGCTTCTCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDCLAPA*GASRRS
Trigger: TGACCTGCGAGAAGCGCCGCACGCGGGGGCTAAGCA...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGATTTGGGGACGATCCTaGTTAGCCCCCGCGTGCGGC +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQIWGRS*LAPACG
Trigger: GCCGCACGCGGGGGCTAAGCAGGATCGTCCCCAAAT...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTATTTGGGGACGATCCTaGTTAGCCCCCGCGTGCGGC +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVIWGRS*LAPACG
Trigger: GCCGCACGCGGGGGCTAAGCAGGATCGTCCCCAAAT...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGGCAGCCACGGTCTGTaGTTTGGACAGAGGGTACTC +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNGSHGL*FGQRVL
Trigger: GAGTACCCTCTGTCCAAAGCACAGACCGTGGCTGCC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTAGGCAGCCACGGTCTGTaGTTTGGACAGAGGGTACTC +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLGSHGL*FGQRVL
Trigger: GAGTACCCTCTGTCCAAAGCACAGACCGTGGCTGCC...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGGCAAAGCCTTTTCTaGAGGTGTGTCCGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHWQSLF*RCVRGV
Trigger: CACACCTCGGACACACCTGCAGAAAAGGCTTTGCCA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGACCACGGCTTCGTCTaGGGCCGTGACTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVDHGFV*GRDLWR
Trigger: CCTCCACAAGTCACGGCCGCAGACGAAGCCGTGGTC...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTAAACTTTTCCACCATTaGATCTGCTTTATGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGKLFHH*ICFMLH
Trigger: ATGAAGCATAAAGCAGATGCAATGGTGGAAAAGTTT...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCTGCTCCATGCTGCTGTaGAGGGTGACCGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSCSMLL*RVTGPM
Trigger: CATGGGGCCGGTCACCCTGCACAGCAGCATGGAGCA...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCCTGTTCCGCAGCCAGTaGAGGCCCTGTTGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLILFRSQ*RPCWEY
Trigger: GTACTCCCAACAGGGCCTGCACTGGCTGCGGAACAG...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLANLSAI*ILLGGG
Trigger: CCCACCTCCAAGTAGTATGCAAATGGCACTGAGATT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLNLSAI*ILLGGG
Trigger: CCCACCTCCAAGTAGTATGCAAATGGCACTGAGATT...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGAAGAGGCTCTGGTTaGTGCTGCCCCAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNGRGSG*CCPRKE
Trigger: TTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCC...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCACATATTACACCGCCTaGCTTTCTCAGACCGTCCTG +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGTYYTA*LSQTVL
Trigger: CAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTCTTAATATTTCCAAATaGTTGAAGGCCAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGLNISK*LKAKAK
Trigger: TTTGGCTTTGGCCTTCAAGCATTTGGAAATATTAAG...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATGAAGCTCTCCAGGTATaGAGGATAGACCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYEALQV*RIDLQG
Trigger: GCCCTGGAGGTCTATCCTGCATACCTGGAGAGCTTC...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCATCAATACCCCTGGTaGTTCAACACAAATGCTGAC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAHQYPW*FNTNAD
Trigger: GTCAGCATTTGTGTTGAAGCACCAGGGGTATTGATG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACTTGCCTAAAGTGTTCTaGATCCGGTTGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNLPKVF*IRLESS
Trigger: TGAACTCTCCAACCGGATCCAGAACACTTTAGGCAA...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCGACGAGGGCTGGTTCTaGGCTCTTGAATCTGCAACA +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETDEGWF*ALESAT
Trigger: TGTTGCAGATTCAAGAGCCCAGAACCAGCCCTCGTC...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATCACGGGGACAGCTGCTaGTGTGGAAGTTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNHGDSC*CGSCSA
Trigger: AGCACTACAACTTCCACACCAGCAGCTGTCCCCGTG...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCACGGGGACAGCTGCTaGTGTGGAAGTTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYHGDSC*CGSCSA
Trigger: AGCACTACAACTTCCACACCAGCAGCTGTCCCCGTG...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGTTGGCCGTCAGAGGGTaGGTGCCCAGCCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQLAVRG*VPSLLP
Trigger: TGGCAGAAGGCTGGGCACCCACCCTCTGACGGCCAA...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATATTTATGTCCTTTTGGCCGTCAGAGGGTaGGTGCCCAGCCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VVFGLFSKEYTALDIYVLLAVRG*VPSLLP
Trigger: TGGCAGAAGGCTGGGCACCCACCCTCTGACGGCCAA...AAGGACATAAATATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTATGTGTTGCTCTCTGTTaGCCGTCAGAGGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLCVALC*PSEGGC
Trigger: GCACCCACCCTCTGACGGCCAACAGAGAGCAACACA...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACTGTGTTGCTCTCTGTTaGCCGTCAGAGGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNCVALC*PSEGGC
Trigger: GCACCCACCCTCTGACGGCCAACAGAGAGCAACACA...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CAAGGCACGTCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGTTTCAATGGATCTTGGCCGTCCATTaGCCTCACATACGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: QGTSCRRSDVAENTGFQWILAVH*PHIRGR
Trigger: CCGACCGCGTATGTGAGGCCAATGGACGGCCAAGAT...CCATTGAAACCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGACGTGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTCAGGCTCCGGCTTGCTaGCAGGGACTCCCCTGTATG +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVQAPAC*QGLPCM
Trigger: CATACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTG...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATATTTATGTCCTTCAGGCTCCGGCTTGCTaGCAGGGACTCCCCTGTATG +
Preference number: 4 (lower is better)
Translates to: VVFGLFSKEYTALDIYVLQAPAC*QGLPCM
Trigger: CATACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTG...AAGGACATAAATATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTCAGGCTCCGGCTTGCTaGCAGGGACTCCCCTGTATG +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIQAPAC*QGLPCM
Trigger: CATACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTG...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGCTTGGCCTTGGCTCTaGCAGGCTCCGGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDAWPWL*QAPACW
Trigger: CCAGCAAGCCGGAGCCTGCCAGAGCCAAGGCCAAGC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCTGGAGAGCTTGGCCTTaGCTCTGGCAGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSWRAWP*LWQAPA
Trigger: AGCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCA...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGTGGAGAGCTTGGCCTTaGCTCTGGCAGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQWRAWP*LWQAPA
Trigger: AGCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCA...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCAATAGCAGAAAGTGGTaGAAGCCAGGTCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGNSRKW*KPGHLP
Trigger: CGGGAGATGACCTGGCTTCCACCACTTTCTGCTATT...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCACTTGAATAGCAGAAAGTaGTGGAAGCCAGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: GGLRTLTIMAEGEGEARHLNSRK*WKPGHL
Trigger: GAGATGACCTGGCTTCCACCACTTTCTGCTATTCAA...GTGCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGAATAGGAGGCTTGTaGGGATTAACTTTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQRIGGL*GLTLFS
Trigger: GCTAAACAAAGTTAATCCCCACAAGCCTCCTATTCT...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACTTGCTCTCTGACCCGTaGCTTTCATTTTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNLLSDP*LSFWIR
Trigger: TCTGATCCAAAATGAAAGCCACGGGTCAGAGAGCAA...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAACTTTCCCACAGTCCTaGACGTCCTCTTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKTFPQS*TSSFTG
Trigger: CCCGGTGAAAGAGGACGTCCAGGACTGTGGGAAAGT...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAACTTGTTGGCTGTCCTTaGCCTTTGCTCCTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDELVGCP*PLLLLA
Trigger: TGCAAGGAGGAGCAAAGGCCAAGGACAGCCAACAAG...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTATCCCAGGGGCCTTGTTaGCTGTCCTTGGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLSQGPC*LSLAFA
Trigger: AGCAAAGGCCAAGGACAGCCAACAAGGCCCCTGGGA...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTTCCCAGGGGCCTTGTTaGCTGTCCTTGGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTSQGPC*LSLAFA
Trigger: AGCAAAGGCCAAGGACAGCCAACAAGGCCCCTGGGA...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCATCCTCTCGGTGCGCCTaGTGGGCTTCTTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRASSRCA*WASCPR
Trigger: CCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGA...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGACCACTGCCCCCGTTaGCAGCGGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIDHCPR*QRPPSA
Trigger: GGCTGAAGGAGGCCGCTGCCAACGGGGGCAGTGGTC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGGGCGCTCAATACCCCTaGCTCCTGGGGCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLGAQYP*LLGQVF
Trigger: GAACACCTGCCCCAGGAGCCAGGGGTATTGAGCGCC...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTTGTCCGAGGTGTGGCTaGGCGGTGCGCTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVCPRCG*AVRSQS
Trigger: ACTCTGAGAGCGCACCGCCCAGCCACACCTCGGACA...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTGCGGCCGTGACTTGTaGAGGGGAATGTTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNCGRDL*RGMFSE
Trigger: TTCTGAAAACATTCCCCTCCACAAGTCACGGCCGCA...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCGTGGCCGTTGGAGCCTaGAGACCACGGCTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSVAVGA*RPRLRL
Trigger: CAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCAC...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGAGATTTGGATTCCATaGGGCCTTGTTCCATTGCAT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAEIWIP*GLVPLH
Trigger: ATGCAATGGAACAAGGCCCCATGGAATCCAAATCTC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTGGGAGACATGGGGGATaGGGTTCCAGTGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTGRHGG*GSSALS
Trigger: GGAAAGAGCACTGGAACCCCATCCCCCATGTCTCCC...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACTTGGTGATGCTGACGTaGTTGGCCGCCATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNLVMLT*LAAIWW
Trigger: CCACCAGATGGCGGCCAACCACGTCAGCATCACCAA...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTTGGTGATGCTGACGTaGTTGGCCGCCATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPLVMLT*LAAIWW
Trigger: CCACCAGATGGCGGCCAACCACGTCAGCATCACCAA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAATTCTCGGTTTTCCTTaGCCAGGTTGTCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGILGFP*PGCRPS
Trigger: AGATGGCCGACAACCTGGCCAAGGAAAACCGAGAAT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGTCTAGCCTGGGATTATaGAAACTAGACAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQSSLGL*KLDKEG
Trigger: ACCTTCTTTGTCTAGTTTCCATAATCCCAGGCTAGA...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGCAACTTTCAAGGTaGGCAGGACCAGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTLQLSR*AGPEKL
Trigger: GAGCTTCTCTGGTCCTGCCCACCTTGAAAGTTGCAG...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAAAAATTAGCCGGGTGTaGTGGCACGTGCCTATCTTC +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGKISRV*WHVPIF
Trigger: GAAGATAGGCACGTGCCACCACACCCGGCTAATTTT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGCACTCCTGCATCTGCTaGCTGATGACTGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: GNWHEEASYFHHSGSGLQHSCIC*LMTEIP
Trigger: TGGAATTTCAGTCATCAGCCAGCAGATGCAGGAGTG...CTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGGCATCCCAGGGCTACTaGTTGAACAGGAACCCTGTG +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRASQGY*LNRNPV
Trigger: CACAGGGTTCCTGTTCAACCAGTAGCCCTGGGATGC...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAATGTCCCACCCATCTCTaGGATGAGGAGTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQCPTHL*DEEFSM
Trigger: CATGGAGAACTCCTCATCCCAGAGATGGGTGGGACA...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGAGTATCAAGCTCAGTaGTTGGTGAAGCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNEYQAQ*LVKQSQ
Trigger: TTGGCTTTGCTTCACCAACCACTGAGCTTGATACTC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTCCCAGGAGCATCCTaGGAGAGTGCCACTAGGAGA +
Preference number: 4 (lower is better)
Translates to: LGDHSSSCTEETFHFSTTFPGAS*ESATRR
Trigger: TCTCCTAGTGGCACTCTCCCAGGATGCTCCTGGGAA...CGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp CCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCAATAGCAGAAAGTGGTaGAAGCCAGGTCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: PGRVPLGDHSSSCTEETFNSRKW*KPGHLL
Trigger: CAGGAGATGACCTGGCTTCCACCACTTTCTGCTATT...GAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAAGGGACTCCCCTGTATaGTGTGCAGTGCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGRDSPV*CAVHAG
Trigger: ACCAGCGTGCACTGCACATCATACAGGGGAGTCCCT...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGTCATCTTCCAGCATTaGTGTATTCGATGTGCCATT +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLVIFQH*CIRCAI
Trigger: AATGGCACATCGAATACATCAATGCTGGAAGATGAC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACTCCGGAGCTGCTCTCTaGGTCGCTGGAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDSGAAL*VAGGAA
Trigger: AGCAGCTCCTCCAGCGACTCAGAGAGCAGCTCCGGA...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGGTGGTCCTGGCGTTaGTGGAGCCTACAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKWWSWR*WSLQGP
Trigger: GGGCCCCTGTAGGCTCCATCAACGCCAGGACCACCA...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR TCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAACTCCCTGGGACTTCTTaGTCTCCCTGTAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKLPGTS*SPCSRL
Trigger: AAGACGACTACAGGGAGATCAAGAAGTCCCAGGGAG...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTGGAGGTGGCCAGTCTTaGAGAGCTGTCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPGGGQS*RAVFLS
Trigger: GGAGAGAAAGACAGCTCTTCAAGACTGGCCACCTCC...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGTGAGGTCTCCGCCGTaGGGCTGCAGCTGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSVRSPP*GCSWLS
Trigger: CGACAGCCAGCTGCAGCCTCACGGCGGAGACCTCAC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCTTTTCAGAATTGTTGTaGGCTGCTTTCGTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAFSELL*AAFVRS
Trigger: AGACCTCACGAAAGCAGCTCACAACAATTCTGAAAA...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR TCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAATGCGCTGTGGGATGCTaGCGATGGTCGACGGGGACA +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKCAVGC*RWSTGT
Trigger: TGTCCCCGTCGACCATCGTCAGCATCCCACAGCGCA...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAACTCTGGCCCCAGGGTaGGGTCCCTATGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKTLAPG*GPYDRW
Trigger: CCACCTGTCATAGGGACCTCACCCTGGGGCCAGAGT...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAACTTCAACTCCTAACTaGGCTCCAACACACAGGCAC +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQTSTPN*APTHRH
Trigger: GTGCCTGTGTGTTGGAGCTCAGTTAGGAGTTGAAGT...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCCCCAGAAAGGAACTGTaGTCTTCTGCATTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGPRKEL*SSALQA
Trigger: TGCTTGCAATGCAGAAGATCACAGTTCCTTTCTGGG...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGACCCAGAAAGGAACTGTaGTCTTCTGCATTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGPRKEL*SSALQA
Trigger: TGCTTGCAATGCAGAAGATCACAGTTCCTTTCTGGG...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATGGCGGGACAATCACTTaGACCCAGGAGGCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHGGTIT*TQEAED
Trigger: ATCCTCTGCCTCCTGGGTTCAAGTGATTGTCCCGCC...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGAACCCTGTGGCCATTaGGATGACCTTCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTEPCGH*DDLLKL
Trigger: AAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTC...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACCACCCATCTCTGGGATaGGGAGTTCTCCATGGTGAC +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNHPSLG*GVLHGD
Trigger: GTCACCATGGAGAACTCCTCATCCCAGAGATGGGTG...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTTGGAGAGGCTGCCCTaGGACCCCACGGAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLLERLP*DPTEFP
Trigger: TGGAAACTCCGTGGGGTCTCAGGGCAGCCTCTCCAA...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445815.2
ENST00000671937.1
CDS-3UTR TCA 90 bp CTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTGCACAGCATTACTaGAGCAGACCCTGGGGTACC +
Preference number: 4 (lower is better)
Translates to: LGDHSSSCTEETFHFSTTFAQHY*SRPWGT
Trigger: GGTACCCCAGGGTCTGCTTCAGTAATGCTGTGCAAA...CGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCAGTGCCTCTCTTACTCTaGTGCACGGGGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSVPLLL*CTGTAA
Trigger: AGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGGCAC...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AATAAGTATGCGCTTGCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGGTGCCTCTCTTACTCTaGTGCACGGGGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NKYALANCEGSDSRASGRVPLLL*CTGTAA
Trigger: AGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGGCAC...CCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGCAAGCGCATACTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTATGTTTGGCCCGAGGCTaGTGTCTGCCAACACCATCT +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLCLARG*CLPTPS
Trigger: AGATGGTGTTGGCAGACAGCAGCCTCGGGCCAAACA...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTGAACACAGTGTCCGCTaGTGCTGTGCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIEHSVR*CCAWPP
Trigger: TGGCGGCCAAGCACAGCAGCAGCGGACACTGTGTTC...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTACGCGGTCGGTTTCTaGTGGACCAGGCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPYAVGF*WTRLGF
Trigger: AAAACCCAGCCTGGTCCAGCAGAAACCGACCGCGTA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTCCCCTGTATGATGTaGAGTGCACGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPLPCMM*SARWFP
Trigger: CGGAAACCAGCGTGCACTGCACATCATACAGGGGAG...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TATAAAGAAACAAATTTAATTGACTCACAGTTCCACATGGCTGGGGAGGCCTCATGGCAGGCTCCGGCTTaGTGGCAGGGACTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: YKETNLIDSQFHMAGEASWQAPA*WQGLPC
Trigger: ACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCA...TGAGGCCTCCCCAGCCATGTGGAACTGTGAGTCAATTAAATTTGTTTCTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR GCA 90 bp ACAGTTCCACATGGCTGGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTTTCCACTTTGCCAGGTaGTTGAATAGCAGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: TVPHGWGGLRTLTIMAEGFHFAR*LNSRKW
Trigger: CCACTTTCTGCTATTCAAGCACCTGGCAAAGTGGAA...ACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCCAGCCATGTGGAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR GCA 90 bp GGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCACTTGATGTATTCGATGTaGCATTGTCTGGACTCTCTG +
Preference number: 4 (lower is better)
Translates to: GGLRTLTIMAEGEGEARHLMYSM*HCLDSL
Trigger: CAGAGAGTCCAGACAATGGCACATCGAATACATCAA...GTGCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR GCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGTTCTGCAGTTGGGCTaGTGGACCACGGCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVVLQLG*WTTALS
Trigger: TGACAGCGCCGTGGTCCAGCAGCCCAACTGCAGAAC...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCCCACTTGTTAGAGGATaGCGGTTCAGCCTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIPLVRG*RFSLGA
Trigger: AGCCCCGAGGCTGAACCGGCATCCTCTAACAAGTGG...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTAGCTGTCCTTGGCCTTTaGTCCTCCTTGCAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLAVLGL*SSLQVL
Trigger: GAGCACTTGCAAGGAGGAGCAAAGGCCAAGGACAGC...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAGGCTCGCTCTGTTGTTaGCACAGGGCCTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVGSLCC*HRAWFW
Trigger: CCAAAACCAGGCCCTGTGGCAACAACAGAGCGAGCC...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGAGGAGCGCAGCTCCTTaGGGTGGCTCGCTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLRSAAP*GGSLCC
Trigger: ACAACAGAGCGAGCCACCGCAAGGAGCTGCGCTCCT...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCTTAGCCCCCGCGTaGGGCGCTTCTCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKCLAPA*GASRRS
Trigger: TGACCTGCGAGAAGCGCCGCACGCGGGGGCTAAGCA...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAATTTGGGGACGATCCTaGTTAGCCCCCGCGTGCGGC +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKIWGRS*LAPACG
Trigger: GCCGCACGCGGGGGCTAAGCAGGATCGTCCCCAAAT...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGGTGTGGCTGGGCGGTaGGCTCTCAGAGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDGVAGR*ALRVLG
Trigger: ACCAAGGACTCTGAGAGCGCACCGCCCAGCCACACC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGACCACGGCTTCGTCTaGGGCCGTGACTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDDHGFV*GRDLWR
Trigger: CCTCCACAAGTCACGGCCGCAGACGAAGCCGTGGTC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCTCGAAGACAAGTTTCTaGCTCTTGCAGTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETSKTSF*LLQSLW
Trigger: CCACAGGGACTGCAAGAGGCAGAAACTTGTCTTCGA...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATGAGTACTGGACCAGGTaGTCCATGCTGCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHEYWTR*SMLLCR
Trigger: CCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTC...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCTTTGGTGTGCTGTATTaGACCTGGTTAACTAACCCA +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLFGVLY*TWLTNP
Trigger: TGGGTTAGTTAACCAGGTGCAATACAGCACACCAAA...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAAACGCATCAAAGGGCTaGAGGTGCACATTCTGCATG +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDENASKG*RCTFCM
Trigger: CATGCAGAATGTGCACCTGCAGCCCTTTGATGCGTT...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACAGAGGCTCTGGTTGCTaGTGCCCCAGAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNRGSGC*CPRKEL
Trigger: CAGTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCT...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAACATATTACACCGCCTaGCTTTCTCAGACCGTCCTG +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQTYYTA*LSQTVL
Trigger: CAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGCCAGGAGGCAGAGGATaGAGTGAGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLPGGRG*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCATCCTCTGCCTCCTGG...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCTCCCACATAGGGGATaGTTCATGTCAAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYLPHRG*FMSSHW
Trigger: CCAGTGGCTTGACATGAAGCATCCCCTATGTGGGAG...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAATCTTCTGCACCCCTCTaGCTGGTTAATGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDESSAPL*LVNEDS
Trigger: TGAGTCCTCATTAACCAGGCAGAGGGGTGCAGAAGA...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGTTGCCTAAAGTGTTCTaGATCCGGTTGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: GTGMRKQVISTIPAVGSRLPKVF*IRLESS
Trigger: TGAACTCTCCAACCGGATCCAGAACACTTTAGGCAA...CCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp AGTCATGGGGAGTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATAGAGGAACCCCAGGTTTaGGAACTCCAACGAGATGAC +
Preference number: 4 (lower is better)
Translates to: SHGEWSLGFSQRSTPHWIEEPQV*ELQRDD
Trigger: GTCATCTCGTTGGAGTTCCCAAACCTGGGGTTCCTC...TATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCACTCCCCATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp CTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGGACGAGGGCTGGTTCTaGGCTCTTGAATCTGCAACA +
Preference number: 4 (lower is better)
Translates to: LGDHSSSCTEETFHFSTTDEGWF*ALESAT
Trigger: TGTTGCAGATTCAAGAGCCCAGAACCAGCCCTCGTC...CGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTCACGGGGACAGCTGCTaGTGTGGAAGTTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTHGDSC*CGSCSA
Trigger: AGCACTACAACTTCCACACCAGCAGCTGTCCCCGTG...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACGCTGCTGCTGTGCTTaGCCGCCATGGCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSRCCCA*PPWQVA
Trigger: GGCCACCTGCCATGGCGGCCAAGCACAGCAGCAGCG...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCCGCTGCTGCTGTGCTTaGCCGCCATGGCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCRCCCA*PPWQVA
Trigger: GGCCACCTGCCATGGCGGCCAAGCACAGCAGCAGCG...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGCTTGGCCTTGGCTCTaGCAGGCTCCGGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIAWPWL*QAPACW
Trigger: CCAGCAAGCCGGAGCCTGCCAGAGCCAAGGCCAAGC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAGCTTGGCCTTGGCTCTaGCAGGCTCCGGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAAWPWL*QAPACW
Trigger: CCAGCAAGCCGGAGCCTGCCAGAGCCAAGGCCAAGC...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACTGGAGAGCTTGGCCTTaGCTCTGGCAGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDWRAWP*LWQAPA
Trigger: AGCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCA...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCCCGAGGTTCTGCAGTTaGGCTGCTGGACCACGGCGC +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCPRFCS*AAGPRR
Trigger: GCGCCGTGGTCCAGCAGCCCAACTGCAGAACCTCGG...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGCCTTCTCTCTCAGGCTaGGCTGGCAAACGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQPSLSG*AGKRRG
Trigger: TCCCCGACGTTTGCCAGCCCAGCCTGAGAGAGAAGG...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCATCTCGGTGCGCCTGGTaGGCTTCTTGCCCGCGGACC +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSSRCAW*ASCPRT
Trigger: GGTCCGCGGGCAAGAAGCCCACCAGGCGCACCGAGA...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTCGCAGCTCCTTGCGGTaGCTCGCTCTGTTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVRSSLR*LALLLP
Trigger: TGGCAACAACAGAGCGAGCCACCGCAAGGAGCTGCG...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACCCACGGTCTGTGCTTTaGACAGAGGGTACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNPRSVL*TEGTPP
Trigger: AGGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGG...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGACCACTGCCCCCGTTaGCAGCGGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSDHCPR*QRPPSA
Trigger: GGCTGAAGGAGGCCGCTGCCAACGGGGGCAGTGGTC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCGGTGTTCTGGGATCCTaGACAGGAGGGTCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIGVLGS*TGGSGR
Trigger: TCGACCTGACCCTCCTGTCCAGGATCCCAGAACACC...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAGGCGCTCAATACCCCTaGCTCCTGGGGCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKGAQYP*LLGQVF
Trigger: GAACACCTGCCCCAGGAGCCAGGGGTATTGAGCGCC...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCTCTCAGAGTCCTTGGTaGCAGGGGCGCTCAATACCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLISQSPW*QGRSIP
Trigger: GGGTATTGAGCGCCCCTGCCACCAAGGACTCTGAGA...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCCGCTCTCAGAGTCCTTaGTGGCAGGGGCGCTCAATA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIRSQSP*WQGRSI
Trigger: TATTGAGCGCCCCTGCCACCAAGGACTCTGAGAGCG...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACTGTCCGAGGTGTGGCTaGGCGGTGCGCTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDCPRCG*AVRSQS
Trigger: ACTCTGAGAGCGCACCGCCCAGCCACACCTCGGACA...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCTTTCCTCTTGGATTTTaGCAAAGCCTTTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLFPLGF*QSLFCR
Trigger: CCTGCAGAAAAGGCTTTGCCAAAATCCAAGAGGAAA...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCTGCGGCCGTGACTTGTaGAGGGGAATGTTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETCGRDL*RGMFSE
Trigger: TTCTGAAAACATTCCCCTCCACAAGTCACGGCCGCA...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCCTTCTGGTGTGGCATTaGGGCCTGAGTGGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETLLVWH*GLSGFL
Trigger: TAAAAACCCACTCAGGCCCCAATGCCACACCAGAAG...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTGTTTGTCTTCTGGTGTaGCATTGGGGCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTVCLLV*HWGLSG
Trigger: CCCACTCAGGCCCCAATGCCACACCAGAAGACAAAC...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAACAGGGCGCTGGCGTTaGAGAGGCTGCCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKTGRWR*RGCPET
Trigger: GGTCTCAGGGCAGCCTCTCCAACGCCAGCGCCCTGT...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCCTGGTGGATGCGCTGTaGGATGCTGACGATGGTCGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLILVDAL*DADDGR
Trigger: TCGACCATCGTCAGCATCCCACAGCGCATCCACCAG...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTTGGTTGGCCGCCATCTaGTGGATGCGCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIWLAAI*WMRCGM
Trigger: CATCCCACAGCGCATCCACCAGATGGCGGCCAACCA...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACATTCTCGGTTTTCCTTaGCCAGGTTGTCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHILGFP*PGCRPS
Trigger: AGATGGCCGACAACCTGGCCAAGGAAAACCGAGAAT...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCAGTGCAGGCCCTGTTaGGAGTACTGGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSQCRPC*EYWTRC
Trigger: GCACCTGGTCCAGTACTCCCAACAGGGCCTGCACTG...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGACCAGAGCCCACTCTaGCCCCAGGGTGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIDQSPL*PQGEVP
Trigger: AGGGACCTCACCCTGGGGCCAGAGTGGGCTCTGGTC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTACGTTGAGCCATCTGTaGAGACCAGAGCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPTLSHL*RPEPTL
Trigger: CAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGT...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCAGACTTGAAACAGATTaGCTGACAAATGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLRLETD*LTNAMW
Trigger: CCACATGGCATTTGTCAGCCAATCTGTTTCAAGTCT...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGTTTCTGACATAGGATaGGATTGTGAACTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLVSDIG*DCELCQ
Trigger: TTGGCAGAGTTCACAATCCCATCCTATGTCAGAAAC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGCATACTGATAATCTGTaGGAGCTACATTTAAGCCAT +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQHTDNL*ELHLSH
Trigger: ATGGCTTAAATGTAGCTCCCACAGATTATCAGTATG...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTCATGTCAAGCCACTaGTCTAATGCCTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNFMSSH*SNASVF
Trigger: GAAGACGGAGGCATTAGACCAGTGGCTTGACATGAA...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGATTGAATCTAAGGACATaGGCTGGATCAGGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGLNLRT*AGSGEG
Trigger: CCCTTCACCTGATCCAGCCCATGTCCTTAGATTCAA...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATTGTCCCACCCATCTCTaGGATGAGGAGTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYCPTHL*DEEFSM
Trigger: CATGGAGAACTCCTCATCCCAGAGATGGGTGGGACA...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTCATGGGGAGTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATATGCACACAGACAAGTTaGCTGCCTTCTACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SHGEWSLGFSQRSTPHWICTQTS*LPSTSS
Trigger: GGAGCTGGTAGAAGGCAGCCAACTTGTCTGTGTGCA...TATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCACTCCCCATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGTTCATAGACACACAGTaGCTCGAGGTCCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRFIDTQ*LEVPFL
Trigger: CAGGAATGGGACCTCGAGTCACTGTGTGTCTATGAA...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTAGGGACTCCCCTGTATaGTGTGCAGTGCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVRDSPV*CAVHAG
Trigger: ACCAGCGTGCACTGCACATCATACAGGGGAGTCCCT...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAACTTTGCCAGGTGCTTaGATAGCAGAAAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDETLPGA*IAESGG
Trigger: TCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGT...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAGGAGGTGGCCAGTCTTaGAGAGCTGTCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVGGGQS*RAVFLS
Trigger: GGAGAGAAAGACAGCTCTTCAAGACTGGCCACCTCC...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCGGAGGTGGCCAGTCTTaGAGAGCTGTCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIGGGQS*RAVFLS
Trigger: GGAGAGAAAGACAGCTCTTCAAGACTGGCCACCTCC...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCTTTGCTGGAAGAGGCTaGAGTAAACAAACTGTTGCC +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGFAGRG*SKQTVA
Trigger: GGCAACAGTTTGTTTACTTCAGCCTCTTCCAGCAAA...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGGTGAGGTCTCCGCCGTaGGGCTGCAGCTGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMVRSPP*GCSWLS
Trigger: CGACAGCCAGCTGCAGCCTCACGGCGGAGACCTCAC...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGAGCTCTACTGTTTCTaGATACATCGTATAAGGAGA +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNELYCF*IHRIRR
Trigger: TCTCCTTATACGATGTATTCAGAAACAGTAGAGCTC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTTGGAGAGGCTGCCCTaGGACCCCACGGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYLERLP*DPTELA
Trigger: CGCCAGCTCCGTGGGGTCTCAGGGCAGCCTCTCCAA...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCTGCGCTGTGGGATGCTaGCGATGGTCGACGGGGACA +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCCAVGC*RWSTGT
Trigger: TGTCCCCGTCGACCATCGTCAGCATCCCACAGCGCA...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGCAGATCCAGGTCGTTaGAGAATTCTCGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTADPGR*RILGFP
Trigger: AGGAAAACCGAGAATTCTTCAACGACCTGGATCTGC...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAAGGGTGAGGTCCCTATaGCAGGTGGGCGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRARVRSL*QVGAVP
Trigger: CGGAACAGCGCCCACCTGTCATAGGGACCTCACCCT...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTAGTCAGAAACCTCTaGTCACTTTGTCTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTLVRNL*SLCLAW
Trigger: CCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAG...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCTAGTCAGAAACCTCTaGTCACTTTGTCTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLVRNL*SLCLAW
Trigger: CCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGTGCCGTCATCACCTTaGAAAAATGGATTGCACCAC +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHVPSSP*KNGLHH
Trigger: GTGGTGCAATCCATTTTTTCAAGGTGATGACGGCAC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCATAGGATGGGATTGTaGACTCTGCCAAAAATTAGT +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLHRMGL*TLPKIS
Trigger: ACTAATTTTTGGCAGAGTTCACAATCCCATCCTATG...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTCTGGAAAGGCAGGTaGTCAGCTCCGAATGAGGAT +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNVWKGR*SAPNED
Trigger: ATCCTCATTCGGAGCTGATCACCTGCCTTTCCAGAC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409579.5
CDS-3UTR TCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCATGGGCTGGATCAGGTaGAGGGATGGTTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETMGWIR*RDGFAF
Trigger: AAAAGCAAAACCATCCCTTCACCTGATCCAGCCCAT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGAAGCTCAGTGGTTGGTaGAGCAAAGCCAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRKLSGW*SKAKFL
Trigger: CAGGAACTTGGCTTTGCTTCACCAACCACTGAGCTT...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAAGAAGAGAACGTTCTTaGAAGACTGCTGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGRRERS*KTAGCF
Trigger: GAAACACCCAGCAGTCTTTCAAGAACGTTCTCTTCT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTGTTGCTTGATCCTACTTaGCTCCAGGCCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: ETTVLPAQRKPSISPQRLLLDPT*LQALPA
Trigger: AGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAA...CAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp GGGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGTAAGATTGGAGGCTTaGTTCTCCCCCTTTCATAAA +
Preference number: 4 (lower is better)
Translates to: GNWHEEASYFHHSGSGLQVRLEA*FSPFHK
Trigger: TTTATGAAAGGGGGAGAATCAAGCCTCCAATCTTAC...CTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTTGTCGACTTCAAACTTaGCGCCCGTCTCCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVCRLQT*RPSPVW
Trigger: CCAGACCGGAGACGGGCGGCAAGTTTGAAGTCGACA...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGGGCCCACCTCCACATTaGACACTTGTTTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLGPPPH*TLVWPE
Trigger: CTCGGGCCAAACAAGTGTGCAATGTGGAGGTGGGCC...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCACACAGTGTCCGCTGCTaGTGTGCTTGGCCGCCATGG +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAHSVRC*CAWPPW
Trigger: CCATGGCGGCCAAGCACAGCAGCAGCGGACACTGTG...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATACGCGGTCGGTTTCTaGTGGACCAGGCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGYAVGF*WTRLGF
Trigger: AAAACCCAGCCTGGTCCAGCAGAAACCGACCGCGTA...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AATAAGTATGCGCTTGCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGCTCCCCTGTATGATGTaGAGTGCACGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: NKYALANCEGSDSRASGRLPCMM*SARWFP
Trigger: CGGAAACCAGCGTGCACTGCACATCATACAGGGGAG...CCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGCAAGCGCATACTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTAAGCCGTTCTCTGAGCTaGCTGCTGTTCATTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLSRSLS*LLFILL
Trigger: GAGGAGAATGAACAGCAGGCAGCTCAGAGAACGGCT...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CAAGGCACGTCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGTTTCAATGGAGCCGTTCTCTGAGCTaGCTGCTGTTCATTCTCCTC +
Preference number: 4 (lower is better)
Translates to: QGTSCRRSDVAENTGFQWSRSLS*LLFILL
Trigger: GAGGAGAATGAACAGCAGGCAGCTCAGAGAACGGCT...CCATTGAAACCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGACGTGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR GCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTAAGGCACCGAGGTTCTaGAGTTGGGCTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVKAPRF*SWAAGP
Trigger: TGGTCCAGCAGCCCAACTGCAGAACCTCGGTGCCTT...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAATGCTGCTGCTGCCCTTaGTGGAAGGCACCGAGGTTC +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKCCCCP*WKAPRF
Trigger: GAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCA...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACCACTCTCGCTGGAGCTaGTCTCGGTCTCCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDHSRWS*SRSPSQ
Trigger: CTGACTCGGAGACCGAGAGCAGCTCCAGCGAGAGTG...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAAGGAGCGCAGCTCCTTaGGGTGGCTCGCTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKRSAAP*GGSLCC
Trigger: ACAACAGAGCGAGCCACCGCAAGGAGCTGCGCTCCT...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGGTGTGGCTGGGCGGTaGGCTCTCAGAGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIGVAGR*ALRVLG
Trigger: ACCAAGGACTCTGAGAGCGCACCGCCCAGCCACACC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCGGTGTGGCTGGGCGGTaGGCTCTCAGAGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCGVAGR*ALRVLG
Trigger: ACCAAGGACTCTGAGAGCGCACCGCCCAGCCACACC...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTGGCAAAGCCTTTTCTaGAGGTGTGTCCGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPWQSLF*RCVRGV
Trigger: CACACCTCGGACACACCTGCAGAAAAGGCTTTGCCA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCATGTTGCAGTGGTTTaGAGACAAAGTATTACTGGT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAHVAVV*RQSITG
Trigger: ACCAGTAATACTTTGTCTGCAAACCACTGCAACATG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAGACCACGGCTTCGTCTaGGGCCGTGACTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKDHGFV*GRDLWR
Trigger: CCTCCACAAGTCACGGCCGCAGACGAAGCCGTGGTC...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCTCGATAAACGACAATaGTGCTTCAGCATAGTTCAA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLALDKRQ*CFSIVQ
Trigger: TTGAACTATGCTGAAGCAGCATTGTCGTTTATCGAG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCTCCATGCTGCTGTaGAGGGTGACCGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKCSMLL*RVTGPM
Trigger: CATGGGGCCGGTCACCCTGCACAGCAGCATGGAGCA...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCTGCTCCATGCTGCTGTaGAGGGTGACCGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCCSMLL*RVTGPM
Trigger: CATGGGGCCGGTCACCCTGCACAGCAGCATGGAGCA...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGGAGTACTGGACCAGGTaGTCCATGCTGCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQEYWTR*SMLLCR
Trigger: CCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTC...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTAGGCAGGAAGAAGAAATaGATGTGGCTGGTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLGRKKK*MWLVGL
Trigger: CAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCC...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCTGCAGGTGCACATTCTaGATGAGGAGTGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETCRCTF*MRSERI
Trigger: GATTCTCTCACTCCTCATGCAGAATGTGCACCTGCA...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATTCAAAGGGCTGCAGGTaGACATTCTGCATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNSKGCR*TFCMRS
Trigger: ACTCCTCATGCAGAATGTGCACCTGCAGCCCTTTGA...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCGGAACTGTGATCTTCTaGATTGCAAGCAGCCTGCTA +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETGTVIF*IASSLL
Trigger: TAGCAGGCTGCTTGCAATGCAGAAGATCACAGTTCC...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACAAGGCCAAAGCCAAATaGAAATTCCACAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNKAKAK*KFHKPF
Trigger: GAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTT...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAGAAGCTCTCCAGGTATaGAGGATAGACCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGEALQV*RIDLQG
Trigger: GCCCTGGAGGTCTATCCTGCATACCTGGAGAGCTTC...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGTGCTGATAAAACACTaGTGGCCCACCTGTCAAATG +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQVLIKH*WPTCQM
Trigger: CATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCAC...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCGTGCTGATAAAACACTaGTGGCCCACCTGTCAAATG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETVLIKH*WPTCQM
Trigger: CATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCAC...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAAACGTGCTCCACACGTaGTCCACAGATGAAACAAGA +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQNVLHT*STDETR
Trigger: TCTTGTTTCATCTGTGGAGCACGTGTGGAGCACGTT...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAAACGTGCTCCACACGTaGTCCACAGATGAAACAAGA +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDENVLHT*STDETR
Trigger: TCTTGTTTCATCTGTGGAGCACGTGTGGAGCACGTT...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCAACCAAAATCACCCATaGCAAACCCCACAGAAACTG +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGNQNHP*QTPQKL
Trigger: CAGTTTCTGTGGGGTTTGGCATGGGTGATTTTGGTT...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAAACCAAAATCACCCATaGCAAACCCCACAGAAACTG +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGNQNHP*QTPQKL
Trigger: CAGTTTCTGTGGGGTTTGGCATGGGTGATTTTGGTT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCATAATATCCTGTACATaGATTAAGGCTGGTGACTGC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAIISCT*IKAGDC
Trigger: GCAGTCACCAGCCTTAATGCATGTACAGGATATTAT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCGTTCATAGACACTCCTaGATCTGCTGGCTGATGACT +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETVHRHS*ICWLMT
Trigger: AGTCATCAGCCAGCAGATGCAGGAGTGTCTATGAAC...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409579.5
CDS-3UTR GCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCAGTGCATGTGCATACGTaGATGCATGTGCGCGCGTGT +
Preference number: 4 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSVHVHT*MHVRAC
Trigger: ACACGCGCGCACATGCATGCACGTATGCACATGCAC...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCCTGGGAGCGTGCATGTaGATACGTGCATGCATGTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLILGACM*IRACMC
Trigger: GCACATGCATGCACGTATGCACATGCACGCTCCCAG...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGAACCTAAATCCCCTTaGAGCCAACACAAAATTTAC +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNEPKSP*SQHKIY
Trigger: GTAAATTTTGTGTTGGCTGCAAGGGGATTTAGGTTC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ATTCCTTCCCAGGAGCATCCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCCCCACTAGAAATGCCTaGATGAGTGAAACATATTCC +
Preference number: 4 (lower is better)
Translates to: IPSQEHPGRVPLGDHSSSPTRNA*MSETYS
Trigger: GGAATATGTTTCACTCATGCAGGCATTTCTAGTGGG...GGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGGATGCTCCTGGGAAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTGACGGGTAAAGCCCACTaGCCACTAGAAATGCCTGCA +
Preference number: 4 (lower is better)
Translates to: ETTVLPAQRKPSISPQRLTGKAH*PLEMPA
Trigger: TGCAGGCATTTCTAGTGGGCAGTGGGCTTTACCCGT...CAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGACAAACTGGCCTCTaGGTGTCGACTTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNGQTGL*VSTSNL
Trigger: CAAGTTTGAAGTCGACACCCAGAGGCCAGTTTGTCC...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317233.8
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCGGAAGGGGGACAAACTaGCCTCTGGGTGTCGACTTC +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSGRGTN*PLGVDF
Trigger: GAAGTCGACACCCAGAGGCCAGTTTGTCCCCCTTCC...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATTGTTCTGGATCCGGTTaGAGAGTTCATCCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNCSGSG*RVHPPC
Trigger: ACAAGGGGGATGAACTCTCCAACCGGATCCAGAACA...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCTGTTCTGGATCCGGTTaGAGAGTTCATCCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: SATRRPQFFLHRGNLPFLCSGSG*RVHPPC
Trigger: ACAAGGGGGATGAACTCTCCAACCGGATCCAGAACA...GAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATTGTTCTGGATCCGGTTaGAGAGTTCATCCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYCSGSG*RVHPPC
Trigger: ACAAGGGGGATGAACTCTCCAACCGGATCCAGAACA...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTGCCTAAAGTGTTCTaGATCCGGTTGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNLPKVF*IRLESS
Trigger: TGAACTCTCCAACCGGATCCAGAACACTTTAGGCAA...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTGACGAGGGCTGGTTCTaGGCTCTTGAATCTGCAACA +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPDEGWF*ALESAT
Trigger: TGTTGCAGATTCAAGAGCCCAGAACCAGCCCTCGTC...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCAGATAGACGAGGGCTaGTTCTGGGCTCTTGAATCT +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRQIDEG*FWALES
Trigger: AGATTCAAGAGCCCAGAACCAGCCCTCGTCTATCTG...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp AATAAGTATGCGCTTGCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGCACGGGGACAGCTGCTaGTGTGGAAGTTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: NKYALANCEGSDSRASGRHGDSC*CGSCSA
Trigger: AGCACTACAACTTCCACACCAGCAGCTGTCCCCGTG...CCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGCAAGCGCATACTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCTGTGCTTGGCCGCCATaGCAGGTGGCCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCCAWPP*QVASPG
Trigger: CCCAGGAGAGGCCACCTGCCATGGCGGCCAAGCACA...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTATCTGCTGGACCAGGCTaGGTTTTGAAGCTAGGGATG +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLSAGPG*VLKLGM
Trigger: CATCCCTAGCTTCAAAACCCAGCCTGGTCCAGCAGA...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAGCGGTCGGTTTCTGCTaGACCAGGCTGGGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVAVGFC*TRLGFE
Trigger: TTCAAAACCCAGCCTGGTCCAGCAGAAACCGACCGC...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGATTGAATAGCAGAAAGTaGTGGAAGCCAGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGLNSRK*WKPGHL
Trigger: GAGATGACCTGGCTTCCACCACTTTCTGCTATTCAA...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp AACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGCTTTGAATAGCAGAAAGTaGTGGAAGCCAGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: NWHEEASYFHHSGSGLQALNSRK*WKPGHL
Trigger: GAGATGACCTGGCTTCCACCACTTTCTGCTATTCAA...AGCCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp CTCACAGTTCCACATGGCTGGGGAGGCCTCAGGACACTTACAATCATGGCGGAAAAATGGAAATTTGGTTaGTTCCACTTTGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LTVPHGWGGLRTLTIMAEKWKFG*FHFARC
Trigger: GCACCTGGCAAAGTGGAACCAACCAAATTTCCATTT...TTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCCAGCCATGTGGAACTGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAACTGCAGTTGGGCTGCTaGACCACGGCGCTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKLQLGC*TTALSE
Trigger: CTCTGACAGCGCCGTGGTCCAGCAGCCCAACTGCAG...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCTGCTCTCTGAGTCGCTaGAGGAGCTGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCCSLSR*RSCCCR
Trigger: GCGGCAGCAGCAGCTCCTCCAGCGACTCAGAGAGCA...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTTGTTGGCTGTCCTTaGCCTTTGCTCCTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPLVGCP*PLLLLA
Trigger: TGCAAGGAGGAGCAAAGGCCAAGGACAGCCAACAAG...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCTCCCAGGGGCCTTGTTaGCTGTCCTTGGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSSQGPC*LSLAFA
Trigger: AGCAAAGGCCAAGGACAGCCAACAAGGCCCCTGGGA...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTCTCGGTGCGCCTGGTaGGCTTCTTGCCCGCGGACC +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYSRCAW*ASCPRT
Trigger: GGTCCGCGGGCAAGAAGCCCACCAGGCGCACCGAGA...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTGGTGTTCTGGGATCCTaGACAGGAGGGTCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIGVLGS*TGGSGR
Trigger: TCGACCTGACCCTCCTGTCCAGGATCCCAGAACACC...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAGGCGCTCAATACCCCTaGCTCCTGGGGCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKGAQYP*LLGQVF
Trigger: GAACACCTGCCCCAGGAGCCAGGGGTATTGAGCGCC...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCTGTCCGAGGTGTGGCTaGGCGGTGCGCTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCCPRCG*AVRSQS
Trigger: ACTCTGAGAGCGCACCGCCCAGCCACACCTCGGACA...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAGTGGCCGTTGGAGCCTaGAGACCACGGCTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAVAVGA*RPRLRL
Trigger: CAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCAC...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAGAGATTTGGATTCCATaGGGCCTTGTTCCATTGCAT +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGEIWIP*GLVPLH
Trigger: ATGCAATGGAACAAGGCCCCATGGAATCCAAATCTC...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGCATTGGGGCCTGAGTaGGTTTTTAGTCTCATAGCA +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTALGPE*VFSLIA
Trigger: TGCTATGAGACTAAAAACCCACTCAGGCCCCAATGC...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATGTTTGTCTTCTGGTGTaGCATTGGGGCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHVCLLV*HWGLSG
Trigger: CCCACTCAGGCCCCAATGCCACACCAGAAGACAAAC...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCCACGGAGATGGGGCTTaGGCGGCTTTAGATGAGTTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIHGDGA*AALDEF
Trigger: GAACTCATCTAAAGCCGCCCAAGCCCCATCTCCGTG...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGCTGGTGGATGCGCTGTaGGATGCTGACGATGGTCGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLLVDAL*DADDGR
Trigger: TCGACCATCGTCAGCATCCCACAGCGCATCCACCAG...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCTTGGTGATGCTGACGTaGTTGGCCGCCATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSLVMLT*LAAIWW
Trigger: CCACCAGATGGCGGCCAACCACGTCAGCATCACCAA...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGATTCTCGGTTTTCCTTaGCCAGGTTGTCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRILGFP*PGCRPS
Trigger: AGATGGCCGACAACCTGGCCAAGGAAAACCGAGAAT...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCCCTGTTGGGAGTACTaGACCAGGTGCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSPCWEY*TRCSML
Trigger: CAGCATGGAGCACCTGGTCCAGTACTCCCAACAGGG...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCCAGGTCCATCTTCACTaGCAGTCAAGCTTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETQVHLH*QSSFWC
Trigger: ACACCAAAAGCTTGACTGCCAGTGAAGATGGACCTG...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCAAGAAGCACCCCAGTTaGAGACATGTAAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLKKHPS*RHVKWK
Trigger: TTTCCATTTTACATGTCTCCAACTGGGGTGCTTCTT...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAGTAATCACAACACTTTaGGAGGTGGAGGCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKVITTL*EVEAGR
Trigger: TCTACCCGCCTCCACCTCCCAAAGTGTTGTGATTAC...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACCTGCAACTTTCAAGGTaGGCAGGACCAGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNLQLSR*AGPEKL
Trigger: GAGCTTCTCTGGTCCTGCCCACCTTGAAAGTTGCAG...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGGGCCCACCTGTCAAATaGGGCTTCACAGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQGPPVK*GFTGKL
Trigger: GAGCTTCCCTGTGAAGCCCCATTTGACAGGTGGGCC...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTTCCTGGGAAATGTaGGCCATCAGAGTGCTGATA +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNFSWEM*AIRVLI
Trigger: TATCAGCACTCTGATGGCCCACATTTCCCAGGAAAA...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGATCAGGAATATACCTaGACTACTCTCTTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLDQEYT*TTLFQR
Trigger: CCTTTGAAAGAGAGTAGTCCAGGTATATTCCTGATC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCACTCCTGCATCTGCTaGCTGATGACTGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTHSCIC*LMTEIP
Trigger: TGGAATTTCAGTCATCAGCCAGCAGATGCAGGAGTG...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409579.5
CDS-3UTR CCA 90 bp GCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGAATATTTACAGAAGATCTACCAGCTCCCGGTaGTCCCACAGAGCAGATGCG +
Preference number: 4 (lower is better)
Translates to: ANCEGSDSRASGRNIYRRSTSSR*SHRADA
Trigger: CGCATCTGCTCTGTGGGACCACCGGGAGCTGGTAGA...TCTTCTGTAAATATTCCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCATTGTTCACAGGAGTCTaGGGAACCCCAGGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSLFTGV*GTPGLG
Trigger: TCCCAAACCTGGGGTTCCTCAGACTCCTGTGAACAA...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCTGGTTCTGGGCTCTTaGATCTGCAACAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLVLGS*ICNKMF
Trigger: GAACATTTTGTTGCAGATTCAAGAGCCCAGAACCAG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGACTTTGCCAGGTGCTTaGATAGCAGAAAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRTLPGA*IAESGG
Trigger: TCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGT...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGACTTTGCCAGGTGCTTaGATAGCAGAAAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LGDHSSSCTEETFHFSTTTLPGA*IAESGG
Trigger: TCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGT...CGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCATCCGGAGCTGCTCTCTaGGTCGCTGGAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSSGAAL*VAGGAA
Trigger: AGCAGCTCCTCCAGCGACTCAGAGAGCAGCTCCGGA...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTGGTGGTCCTGGCGTTaGTGGAGCCTACAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYWWSWR*WSLQGP
Trigger: GGGCCCCTGTAGGCTCCATCAACGCCAGGACCACCA...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000672756.2
CDS-3UTR TCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGTATTGCCACACTGTTaGTGTTCATGTTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTVLPHC*CSCCSG
Trigger: ACCACTGCAACATGAACATCAACAGTGTGGCAATAC...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAGCAGATCCAGGTCGTTaGAGAATTCTCGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKADPGR*RILGFP
Trigger: AGGAAAACCGAGAATTCTTCAACGACCTGGATCTGC...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTAGTGTCCAAAAACGTTaGGCCATCTGTGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPSVQKR*AICGDQ
Trigger: CTGGTCTCCACAGATGGCTCAACGTTTTTGGACACT...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACACTTCAACTCCTAACTaGGCTCCAACACACAGGCAC +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNTSTPN*APTHRH
Trigger: GTGCCTGTGTGTTGGAGCTCAGTTAGGAGTTGAAGT...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGTGCCGTCATCACCTTaGAAAAATGGATTGCACCAC +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNVPSSP*KNGLHH
Trigger: GTGGTGCAATCCATTTTTTCAAGGTGATGACGGCAC...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAGGCGGGACAATCACTTaGACCCAGGAGGCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKGGTIT*TQEAED
Trigger: ATCCTCTGCCTCCTGGGTTCAAGTGATTGTCCCGCC...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTCTGAGGTCAGGAGTTTaGGACGAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVLRSGV*DEPGQH
Trigger: ATGTTGGCCAGGCTCGTCTCAAACTCCTGACCTCAG...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCAAGAACTACACGCTCTaGCCACTGCCCACAACGGTA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIKNYTL*PLPTTV
Trigger: TACCGTTGTGGGCAGTGGTCAGAGCGTGTAGTTCTT...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCACGTGCTCCACAGATaGAACAAGACAGTCATAAGA +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHHVLHR*NKTVIR
Trigger: TCTTATGACTGTCTTGTTTCATCTGTGGAGCACGTG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAGATGCGAACACGCAGTaGCTCATACTCAATATTAGG +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEDANTQ*LILNIR
Trigger: CCTAATATTGAGTATGAGTCACTGCGTGTTCGCATC...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCGATGCGAACACGCAGTaGCTCATACTCAATATTAGG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETDANTQ*LILNIR
Trigger: CCTAATATTGAGTATGAGTCACTGCGTGTTCGCATC...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGATGCGAACACGCAGTaGCTCATACTCAATATTAGG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHDANTQ*LILNIR
Trigger: CCTAATATTGAGTATGAGTCACTGCGTGTTCGCATC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTCTGTGGCCATTGAGATaGCCTTCTCAAGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTLWPLR*PSQASC
Trigger: ACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAG...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATTGTGACACTAAAGAATaGCAAGCAAAGCGGCATCCC +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNCDTKE*QAKRHP
Trigger: GGGATGCCGCTTTGCTTGTCATTCTTTAGTGTCACA...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCACAGAAACAAATTTAATTaGCTCACAGTTCCACATGGC +
Preference number: 4 (lower is better)
Translates to: GGLRTLTIMAEGEGEARHRNKFN*LTVPHG
Trigger: GCCATGTGGAACTGTGAGTCAATTAAATTTGTTTCT...GTGCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR GCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACTGTCGACTTCAAACTTaGCGCCCGTCTCCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDCRLQT*RPSPVW
Trigger: CCAGACCGGAGACGGGCGGCAAGTTTGAAGTCGACA...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTCTGCACGGGGACAGCTaGTGGTGTGGAAGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVLHGDS*WCGSCS
Trigger: ACTACAACTTCCACACCAGCAGCTGTCCCCGTGCAG...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTCCGTCAGAGGGTGGGTaGCCAGCCTTCTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIPSEGG*PAFCQP
Trigger: GGGCTGGCAGAAGGCTGGGCACCCACCCTCTGACGG...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTGTTTGGCCCGAGGCTaGTGTCTGCCAACACCATCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLCLARG*CLPTPS
Trigger: AGATGGTGTTGGCAGACAGCAGCCTCGGGCCAAACA...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TTTCAAACAAGCCAACTTCCTAATTACAATGGAGAGGGAACTGGCATGAGGAAGGGCCCACCTCCACATTaGACACTTGTTTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: FQTSQLPNYNGEGTGMRKGPPPH*TLVWPE
Trigger: CTCGGGCCAAACAAGTGTGCAATGTGGAGGTGGGCC...CTTCCTCATGCCAGTTCCCTCTCCATTGTAATTAGGAAGTTGGCTTGTTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCTGTCCGCTGCTGCTGTaGTTGGCCGCCATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PKPWADVISLRTEFIIFLCPLLL*LAAMAG
Trigger: ACCTGCCATGGCGGCCAAGCACAGCAGCAGCGGACA...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCGAACACAGTGTCCGCTaGTGCTGTGCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCEHSVR*CCAWPP
Trigger: TGGCGGCCAAGCACAGCAGCAGCGGACACTGTGTTC...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCAGCCGTTCTCTGAGCTaGCTGCTGTTCATTCTCCTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLISRSLS*LLFILL
Trigger: GAGGAGAATGAACAGCAGGCAGCTCAGAGAACGGCT...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTGTTCTGCAGTTGGGCTaGTGGACCACGGCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLVLQLG*WTTALS
Trigger: TGACAGCGCCGTGGTCCAGCAGCCCAACTGCAGAAC...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTTGCTGCTGCTGCCCTTaGTGGAAGGCACCGAGGTTC +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLICCCCP*WKAPRF
Trigger: GAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCA...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCCACTCTCGCTGGAGCTaGTCTCGGTCTCCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCHSRWS*SRSPSQ
Trigger: CTGACTCGGAGACCGAGAGCAGCTCCAGCGAGAGTG...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTCACTCTCGCTGGAGCTaGTCTCGGTCTCCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIHSRWS*SRSPSQ
Trigger: CTGACTCGGAGACCGAGAGCAGCTCCAGCGAGAGTG...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTAGAGGGTACTCCTCCTaGTCGGACTCCAGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLRGYSS*SDSRSE
Trigger: CTCCGACCTGGAGTCCGAGCAGGAGGAGTACCCTCT...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGGCAGCCACGGTCTGTaGTTTGGACAGAGGGTACTC +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDGSHGL*FGQRVL
Trigger: GAGTACCCTCTGTCCAAAGCACAGACCGTGGCTGCC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTATCGAAGACAAGTTTCTaGCTCTTGCAGTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLSKTSF*LLQSLW
Trigger: CCACAGGGACTGCAAGAGGCAGAAACTTGTCTTCGA...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCAAACACACATGCCCTaGAAAAGATCATTGTTCAAT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAQTHMP*KRSLFN
Trigger: ATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATTGCAGGTGCACATTCTaGATGAGGAGTGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNCRCTF*MRSERI
Trigger: GATTCTCTCACTCCTCATGCAGAATGTGCACCTGCA...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGTGCAGGTGCACATTCTaGATGAGGAGTGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRCRCTF*MRSERI
Trigger: GATTCTCTCACTCCTCATGCAGAATGTGCACCTGCA...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCTGTGATCTTCTGCATTaGAAGCAGCCTGCTAATCAA +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGCDLLH*KQPANQ
Trigger: TTGATTAGCAGGCTGCTTGCAATGCAGAAGATCACA...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGTTGGTTTCAGTTGTGTaGAGTTCCCTGACTGCACAC +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRLVSVV*SSLTAH
Trigger: GTGTGCAGTCAGGGAACTGCACACAACTGAAACCAA...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACCCAAATGGTTGGAAGTaGAGTTTATGTGGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNPNGWK*SLCGQV
Trigger: AACCTGACCACATAAACTGCACTTCCAACCATTTGG...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATATTTATGTCCTTCACAGACAAGTTGGCTaGCTTCTACCAGCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: VVFGLFSKEYTALDIYVLHRQVG*LLPAPG
Trigger: ACCGGGAGCTGGTAGAAGGCAGCCAACTTGTCTGTG...AAGGACATAAATATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTGGAAAATGCTCTGAAGTaGTGGTCTTGGCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: ETTVLPAQRKPSISPQRLENALK*WSWPGK
Trigger: CTTGCCTGGCCAAGACCAGCACTTCAGAGCATTTTC...CAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCGACGAGGGCTGGTTCTaGGCTCTTGAATCTGCAACA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIDEGWF*ALESAT
Trigger: TGTTGCAGATTCAAGAGCCCAGAACCAGCCCTCGTC...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCTTGGCCGTCAGAGGGTaGGTGCCCAGCCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: PKPWADVISLRTEFIIFLLAVRG*VPSLLP
Trigger: TGGCAGAAGGCTGGGCACCCACCCTCTGACGGCCAA...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTCATTGCACACTTGTTTaGCCCGAGGCTGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIHCTLV*PEAAVC
Trigger: GCAGACAGCAGCCTCGGGCCAAACAAGTGTGCAATG...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTCATTGCACACTTGTTTaGCCCGAGGCTGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVHCTLV*PEAAVC
Trigger: GCAGACAGCAGCCTCGGGCCAAACAAGTGTGCAATG...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATGGCCGCCATGGCAGGTaGCCTCTCCTGGGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYGRHGR*PLLGLK
Trigger: CTTCAGACCCAGGAGAGGCCACCTGCCATGGCGGCC...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCTCTGCTGGACCAGGCTaGGTTTTGAAGCTAGGGATG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLISAGPG*VLKLGM
Trigger: CATCCCTAGCTTCAAAACCCAGCCTGGTCCAGCAGA...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATTCTGCTGGACCAGGCTaGGTTTTGAAGCTAGGGATG +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHSAGPG*VLKLGM
Trigger: CATCCCTAGCTTCAAAACCCAGCCTGGTCCAGCAGA...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CAAGGCACGTCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGTTTCAATGGATGTGCAGTGCACGCTaGTTTCCGAAGACGACTTCA +
Preference number: 4 (lower is better)
Translates to: QGTSCRRSDVAENTGFQWMCSAR*FPKTTS
Trigger: TGAAGTCGTCTTCGGAAACCAGCGTGCACTGCACAT...CCATTGAAACCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGACGTGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGTCCTTATTTGGAAATaGAAATTTGGTTGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNVLIWK*KFGWFH
Trigger: GTGGAACCAACCAAATTTCCATTTCCAAATAAGGAC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp ACAGTTCCACATGGCTGGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTTGCATCACCTTTCTTTaGATTATTGTGTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: TVPHGWGGLRTLTIMAEGCITFL*IIVSRG
Trigger: TCCTCTGGACACAATAATCCAAAGAAAGGTGATGCA...ACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCCAGCCATGTGGAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCACGATGTGCCATTGTCTaGACTCTCTGGCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSRCAIV*TLWLCI
Trigger: GATGCAGAGCCAGAGAGTCCAGACAATGGCACATCG...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCCTGCAGTTGGGCTGCTaGACCACGGCGCTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCLQLGC*TTALSE
Trigger: CTCTGACAGCGCCGTGGTCCAGCAGCCCAACTGCAG...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCCTGCAGTTGGGCTGCTaGACCACGGCGCTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: PKPWADVISLRTEFIIFLLQLGC*TTALSE
Trigger: CTCTGACAGCGCCGTGGTCCAGCAGCCCAACTGCAG...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCCCTTCTCTCTCAGGCTaGGCTGGCAAACGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCPSLSG*AGKRRG
Trigger: TCCCCGACGTTTGCCAGCCCAGCCTGAGAGAGAAGG...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGCCACGGTCTGTGCTTTaGACAGAGGGTACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLPRSVL*TEGTPP
Trigger: AGGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGG...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGCCACGGTCTGTGCTTTaGACAGAGGGTACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQPRSVL*TEGTPP
Trigger: AGGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGG...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATTATTACTGGTGGAGGTaGCCAGTCTTGAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNYYWWR*PVLKSC
Trigger: ACAGCTCTTCAAGACTGGCCACCTCCACCAGTAATA...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCAGACAAAGTATTACTaGTGGAGGTGGCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRQTKYY*WRWPVL
Trigger: CAAGACTGGCCACCTCCACCAGTAATACTTTGTCTG...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAACTCTTGCAGTCCCTGTaGCCGTTGGAGCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKLLQSL*PLEPGD
Trigger: GTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAG...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGGTTTGTCTTCTGGTGTaGCATTGGGGCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQVCLLV*HWGLSG
Trigger: CCCACTCAGGCCCCAATGCCACACCAGAAGACAAAC...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAGAATACTTTACAGCGTaGTCCCTTTTGAGTCGAAAC +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGEYFTA*SLLSRN
Trigger: GTTTCGACTCAAAAGGGACCACGCTGTAAAGTATTC...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTCACGGAGATGGGGCTTaGGCGGCTTTAGATGAGTTC +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVHGDGA*AALDEF
Trigger: GAACTCATCTAAAGCCGCCCAAGCCCCATCTCCGTG...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCTTGGCCGCCATCTGGTaGATGCGCTGTGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCLAAIW*MRCGML
Trigger: CAGCATCCCACAGCGCATCCACCAGATGGCGGCCAA...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTTTGGCCGCCATCTGGTaGATGCGCTGTGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLLAAIW*MRCGML
Trigger: CAGCATCCCACAGCGCATCCACCAGATGGCGGCCAA...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCTGGTTGGCCGCCATCTaGTGGATGCGCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCWLAAI*WMRCGM
Trigger: CATCCCACAGCGCATCCACCAGATGGCGGCCAACCA...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACTTGGTGATGCTGACGTaGTTGGCCGCCATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDLVMLT*LAAIWW
Trigger: CCACCAGATGGCGGCCAACCACGTCAGCATCACCAA...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAACAGGTCCATCTTCACTaGCAGTCAAGCTTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKQVHLH*QSSFWC
Trigger: ACACCAAAAGCTTGACTGCCAGTGAAGATGGACCTG...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGAGAAATGCATGTGGCTaGTGGGCTTGTTATCACAGG +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRRNACG*WACYHR
Trigger: CCTGTGATAACAAGCCCACCAGCCACATGCATTTCT...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATAAAACACTGCTaGCCCACCTGTCAAATGGGG +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPLIKHC*PTCQMG
Trigger: CCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAG...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACTTCACAAGCAACAATTaGAGGATGGTTACTAACCAA +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNFTSNN*RMVTNQ
Trigger: TTGGTTAGTAACCATCCTCCAATTGTTGCTTGTGAA...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTAAAAATTAGCCGGGTGTaGTGGCACGTGCCTATCTTC +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLKISRV*WHVPIF
Trigger: GAAGATAGGCACGTGCCACCACACCCGGCTAATTTT...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACAAAATTAGCCGGGTGTaGTGGCACGTGCCTATCTTC +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNKISRV*WHVPIF
Trigger: GAAGATAGGCACGTGCCACCACACCCGGCTAATTTT...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTCAAACTGTGAGCAGTaGTTGTCTCAGGCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPSNCEQ*LSQAEG
Trigger: CCCTTCTGCCTGAGACAACCACTGCTCACAGTTTGA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCCTACATCAATACCCCTaGTGCTTCAACACAAATGCT +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGLHQYP*CFNTNA
Trigger: AGCATTTGTGTTGAAGCACCAGGGGTATTGATGTAG...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGCTGAGTCATGGGGAGTaGTCTTTGGGCTTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LGDHSSSCTEETFHFSTTLSHGE*SLGFSQ
Trigger: TTGAGAAAAGCCCAAAGACCACTCCCCATGACTCAG...CGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CAA 72 bp ATTAGTGCTTTTGAATACTTTACAGCGTGGTCCCTTTaGAGTCGAAACATCCGCCAGTACAGGAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ISAFEYFTAWSL*SRNIRQYRRAR
Trigger: CCTGGCCCTCCTGTACTGGCGGATGTTTCGACTCAAAAGGGACCACGCTGTAAAGTATTCAAAAGCACTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
CDS-3UTR TCA 90 bp CTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGCTGGTTCTGGGCTCTTaGATCTGCAACAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: LGDHSSSCTEETFHFSTTLVLGS*ICNKMF
Trigger: GAACATTTTGTTGCAGATTCAAGAGCCCAGAACCAG...CGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAACCTGCTTGGGGATGCTaGACTTGGAGAGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKPAWGC*TWRAWP
Trigger: AGGCCAAGCTCTCCAAGTTCAGCATCCCCAAGCAGG...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAACCAGAGGATACAAGCTaGGAGTCCTTATTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEPEDTS*ESLFGN
Trigger: ATTTCCAAATAAGGACTCTCAGCTTGTATCCTCTGG...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGTCATCTTCCAGCATTaGTGTATTCGATGTGCCATT +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHVIFQH*CIRCAI
Trigger: AATGGCACATCGAATACATCAATGCTGGAAGATGAC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp AAGGGGAAGCAAGGCACGTCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGGTCATCTTCCAGCATTaGTGTATTCGATGTGCCATT +
Preference number: 4 (lower is better)
Translates to: KGKQGTSCRRSDVAENTGVIFQH*CIRCAI
Trigger: AATGGCACATCGAATACATCAATGCTGGAAGATGAC...CCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGACGTGCCTTGCTTCCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR TCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCCGGAGAGCCGTTCTCTaGGCTGCCTGCTGTTCATTC +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCRRAVL*AACCSF
Trigger: GAATGAACAGCAGGCAGCTCAGAGAACGGCTCTCCG...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCACGGAGAGCCGTTCTCTaGGCTGCCTGCTGTTCATTC +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRARRAVL*AACCSF
Trigger: GAATGAACAGCAGGCAGCTCAGAGAACGGCTCTCCG...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTCCGGAGCTGCTCTCTaGGTCGCTGGAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYSGAAL*VAGGAA
Trigger: AGCAGCTCCTCCAGCGACTCAGAGAGCAGCTCCGGA...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACACGACTCTGTCTCAATaGACTCCTTGGATTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNTTLSQ*TPWIWG
Trigger: TCCCCAAATCCAAGGAGTTCATTGAGACAGAGTCGT...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR TCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAGTATTGCCACACTGTTaGTGTTCATGTTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKVLPHC*CSCCSG
Trigger: ACCACTGCAACATGAACATCAACAGTGTGGCAATAC...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAATTTGCTGGAAGAGGCTaGAGTAAACAAACTGTTGCC +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKFAGRG*SKQTVA
Trigger: GGCAACAGTTTGTTTACTTCAGCCTCTTCCAGCAAA...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTTTTTCAGAATTGTTGTaGGCTGCTTTCGTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTFSELL*AAFVRS
Trigger: AGACCTCACGAAAGCAGCTCACAACAATTCTGAAAA...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCACTTCGTCTGCGGCCGTaGCTTGTGGAGGGGAATGTT +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRALRLRP*LVEGNV
Trigger: AACATTCCCCTCCACAAGTCACGGCCGCAGACGAAG...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACAGCGTGGTCCCTTTTaGGTCGAAACATCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKQRGPF*VETSAS
Trigger: ACTGGCGGATGTTTCGACTCAAAAGGGACCACGCTG...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACTTGGGCGGCTTTAGATaGGTTCTTGAAATAGTCGAT +
Preference number: 4 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHLGGFR*VLEIVD
Trigger: ATCGACTATTTCAAGAACTCATCTAAAGCCGCCCAA...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATCTGCTAATCAAAGCCTaGAAAATCGCCCCCAAATCA +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNLLIKA*KIAPKS
Trigger: TGATTTGGGGGCGATTTTTCAGGCTTTGATTAGCAG...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTCCCAGAAAGGAACTGTaGTCTTCTGCATTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTPRKEL*SSALQA
Trigger: TGCTTGCAATGCAGAAGATCACAGTTCCTTTCTGGG...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAATATACATCAAACTGTaGGCAGTGGTTGTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKIYIKL*AVVVSG
Trigger: GCCTGAGACAACCACTGCTCACAGTTTGATGTATAT...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGACAGTTGAACTTGTGTTaGACTTTGGAGGCAAATGTA +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGQLNLC*TLEANV
Trigger: TACATTTGCCTCCAAAGTTCAACACAAGTTCAACTG...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAGAACCCTGTGGCCATTaGGATGACCTTCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVEPCGH*DDLLKL
Trigger: AAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTC...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCACCTCTCTTACTCTGCTaGACGGGGACAGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAPLLLC*TGTAAG
Trigger: ACCAGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGG...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAACCTCTCTTACTCTGCTaGACGGGGACAGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKPLLLC*TGTAAG
Trigger: ACCAGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGG...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAGTGCCTCTCTTACTCTaGTGCACGGGGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAVPLLL*CTGTAA
Trigger: AGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGGCAC...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTTCAAACAAGCCAACTTCCTAATTACAATGGAGAGGGAACTGGCATGAGGAAGTGTTTGGCCCGAGGCTaGTGTCTGCCAACACCATCT +
Preference number: 4 (lower is better)
Translates to: FQTSQLPNYNGEGTGMRKCLARG*CLPTPS
Trigger: AGATGGTGTTGGCAGACAGCAGCCTCGGGCCAAACA...CTTCCTCATGCCAGTTCCCTCTCCATTGTAATTAGGAAGTTGGCTTGTTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATTGGACTCTCTGGCTCTaGATCACCTTTCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNWTLWL*ITFLWI
Trigger: AATCCAAAGAAAGGTGATGCAGAGCCAGAGAGTCCA...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCTTGATGTATTCGATGTaGCATTGTCTGGACTCTCTG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETLMYSM*HCLDSL
Trigger: CAGAGAGTCCAGACAATGGCACATCGAATACATCAA...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGAGCCGTTCTCTGAGCTaGCTGCTGTTCATTCTCCTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLSRSLS*LLFILL
Trigger: GAGGAGAATGAACAGCAGGCAGCTCAGAGAACGGCT...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGTTCTGCAGTTGGGCTaGTGGACCACGGCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSVLQLG*WTTALS
Trigger: TGACAGCGCCGTGGTCCAGCAGCCCAACTGCAGAAC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCAGTCAGATCCGGAGCTaGTCTCTGAGTCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCSQIRS*SLSRWR
Trigger: CCTCCAGCGACTCAGAGAGCAGCTCCGGATCTGACT...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGGTTGTAGTACTGATTaGTCTCTGACCCGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNGCSTD*SLTRGF
Trigger: AAAGCCACGGGTCAGAGAGCAATCAGTACTACAACC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTGGTTGTAGTACTGATTaGTCTCTGACCCGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPGCSTD*SLTRGF
Trigger: AAAGCCACGGGTCAGAGAGCAATCAGTACTACAACC...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGCGGGCGGGGACTTCTaGTTCACGCCTTTACTCCCA +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSAGGDF*FTPLLP
Trigger: TGGGAGTAAAGGCGTGAAGCAGAAGTCCCCGCCCGC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAAGGAGCGCAGCTCCTTaGGGTGGCTCGCTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSRSAAP*GGSLCC
Trigger: ACAACAGAGCGAGCCACCGCAAGGAGCTGCGCTCCT...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCTGCTTAGCCCCCGCGTaGGGCGCTTCTCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGCLAPA*GASRRS
Trigger: TGACCTGCGAGAAGCGCCGCACGCGGGGGCTAAGCA...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGATTTGGGGACGATCCTaGTTAGCCCCCGCGTGCGGC +
Preference number: 4 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMIWGRS*LAPACG
Trigger: GCCGCACGCGGGGGCTAAGCAGGATCGTCCCCAAAT...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAAGAGGGTACTCCTCCTaGTCGGACTCCAGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSRGYSS*SDSRSE
Trigger: CTCCGACCTGGAGTCCGAGCAGGAGGAGTACCCTCT...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCGGCAGCCACGGTCTGTaGTTTGGACAGAGGGTACTC +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCGSHGL*FGQRVL
Trigger: GAGTACCCTCTGTCCAAAGCACAGACCGTGGCTGCC...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAGACCACGGCTTCGTCTaGGGCCGTGACTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: MRISFSAESLIALHSMCSDHGFV*GRDLWR
Trigger: CCTCCACAAGTCACGGCCGCAGACGAAGCCGTGGTC...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCATTGCATCTGCTTTATaGTTCATTCGTTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLIASAL*FIRLAS
Trigger: AGAAGCTAAACGAATGAAGCATAAAGCAGATGCAAT...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACCTCGATAAACGACAATaGTGCTTCAGCATAGTTCAA +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNLDKRQ*CFSIVQ
Trigger: TTGAACTATGCTGAAGCAGCATTGTCGTTTATCGAG...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCTTTGGTGTGCTGTATTaGACCTGGTTAACTAACCCA +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETFGVLY*TWLTNP
Trigger: TGGGTTAGTTAACCAGGTGCAATACAGCACACCAAA...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRNLSAI*ILLGGG
Trigger: CCCACCTCCAAGTAGTATGCAAATGGCACTGAGATT...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACGCTTGTTATCACAGGTaGAGAAAACTTCAACTCCTA +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNACYHR*RKLQLL
Trigger: TAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGC...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACAGATTGGCTGACAAATaGCATGTGGCTCTACAGCCA +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNRLADK*HVALQP
Trigger: TGGCTGTAGAGCCACATGGCATTTGTCAGCCAATCT...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCAAACGCATCAAAGGGCTaGAGGTGCACATTCTGCATG +
Preference number: 4 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSNASKG*RCTFCM
Trigger: CATGCAGAATGTGCACCTGCAGCCCTTTGATGCGTT...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCAACGCATCAAAGGGCTaGAGGTGCACATTCTGCATG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLINASKG*RCTFCM
Trigger: CATGCAGAATGTGCACCTGCAGCCCTTTGATGCGTT...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCTGTGATCTTCTGCATTaGAAGCAGCCTGCTAATCAA +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETCDLLH*KQPANQ
Trigger: TTGATTAGCAGGCTGCTTGCAATGCAGAAGATCACA...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGGAACTGTGATCTTCTaGATTGCAAGCAGCCTGCTA +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNGTVIF*IASSLL
Trigger: TAGCAGGCTGCTTGCAATGCAGAAGATCACAGTTCC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAGGAAGAGGCTCTGGTTaGTGCTGCCCCAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKGRGSG*CCPRKE
Trigger: TTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCC...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGTTACAACAAAGTCTaGAACTTTCAAGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHCYNKV*NFQGGQ
Trigger: CTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTGTGCTGATAAAACACTaGTGGCCCACCTGTCAAATG +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPVLIKH*WPTCQM
Trigger: CATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCAC...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAACTGCTGTACCAACGTaGTCCACACGTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKTAVPT*STRAPQ
Trigger: CTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGT...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAAAACCCCACAGAAACTaGTGTACCAACGTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGKPHRN*CTNVLH
Trigger: GTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCTGCAGAAAGTCTCATTaGATTGCATTCCATGTGTTC +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGCRKSH*IAFHVF
Trigger: GAACACATGGAATGCAATGCAATGAGACTTTCTGCA...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAACCAAATGGTTGGAAGTaGAGTTTATGTGGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQPNGWK*SLCGQV
Trigger: AACCTGACCACATAAACTGCACTTCCAACCATTTGG...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACACAAAATTTACCCCCTaGTGCCTCGGAGTGCCAATT +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNTKFTP*CLGVPI
Trigger: AATTGGCACTCCGAGGCAGCAGGGGGTAAATTTTGT...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AATAAGTATGCGCTTGCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGAGCGCAGGCTCAGTTTaGACAGCATTACTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: NKYALANCEGSDSRASGRSAGSV*TALLKQ
Trigger: CTGCTTCAGTAATGCTGTGCAAACTGAGCCTGCGCT...CCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGCAAGCGCATACTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGAATATTTACAGAAGACATCTGCAGACTGAATaGTGCTGCATCCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: ANCEGSDSRASGRNIYRRHLQTE*CCIPGL
Trigger: GAGCCCTGGGATGCAGCAGCATTCAGTCTGCAGATG...TCTTCTGTAAATATTCCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTGGACCACAGTTCTTCCTaGACAGAGGAAACCTTCCAT +
Preference number: 4 (lower is better)
Translates to: ETTVLPAQRKPSISPQRLDHSSS*TEETFH
Trigger: ATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTC...CAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp CACTTTGCCAGGTGCTTGAATAGCAGAAAGTGGTGGAAGCCAGGTCATCTCCTGAGGATCAGATTCACGTaGCTCTGGCAGGAATATTTA +
Preference number: 4 (lower is better)
Translates to: HFARCLNSRKWWKPGHLLRIRFT*LWQEYL
Trigger: TAAATATTCCTGCCAGAGGCACGTGAATCTGATCCT...CAGGAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACCACGGGGACAGCTGCTaGTGTGGAAGTTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDHGDSC*CGSCSA
Trigger: AGCACTACAACTTCCACACCAGCAGCTGTCCCCGTG...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGTGTTGCTCTCTGTTaGCCGTCAGAGGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKCVALC*PSEGGC
Trigger: GCACCCACCCTCTGACGGCCAACAGAGAGCAACACA...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTTGTGCTTGGCCGCCATaGCAGGTGGCCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RISVNVYGSASSLSILCRCAWPP*QVASPG
Trigger: CCCAGGAGAGGCCACCTGCCATGGCGGCCAAGCACA...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCTCTGCTGGACCAGGCTaGGTTTTGAAGCTAGGGATG +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSSAGPG*VLKLGM
Trigger: CATCCCTAGCTTCAAAACCCAGCCTGGTCCAGCAGA...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAATCTTGGCCGTCCATTaGCCTCACATACGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAILAVH*PHIRGR
Trigger: CCGACCGCGTATGTGAGGCCAATGGACGGCCAAGAT...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCATGTGCAGTGCACGCTaGTTTCCGAAGACGACTTCA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIMCSAR*FPKTTS
Trigger: TGAAGTCGTCTTCGGAAACCAGCGTGCACTGCACAT...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp AATAAGTATGCGCTTGCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGATGTGCAGTGCACGCTaGTTTCCGAAGACGACTTCA +
Preference number: 4 (lower is better)
Translates to: NKYALANCEGSDSRASGRMCSAR*FPKTTS
Trigger: TGAAGTCGTCTTCGGAAACCAGCGTGCACTGCACAT...CCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGCAAGCGCATACTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGTGGAGAGCTTGGCCTTaGCTCTGGCAGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMWRAWP*LWQAPA
Trigger: AGCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCA...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTCTCCACAACGTTTGCTTGATCCTACTTGACTCCAGGCCCTTCCTGCTGGGCTTGGAAATGGAAATTTaGTTGGTTCCACTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: FLHNVCLILLDSRPFLLGLEMEI*LVPLCQ
Trigger: CTGGCAAAGTGGAACCAACCAAATTTCCATTTCCAA...GCCCAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGTCCTTATTTGGAAATaGAAATTTGGTTGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: FHMAGEASGHLQSWRKVKVLIWK*KFGWFH
Trigger: GTGGAACCAACCAAATTTCCATTTCCAAATAAGGAC...CTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCCAGCCATGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGCGATGTGCCATTGTCTaGACTCTCTGGCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQRCAIV*TLWLCI
Trigger: GATGCAGAGCCAGAGAGTCCAGACAATGGCACATCG...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCATGCTGCTGCCCTTGCTaGAAGGCACCGAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSCCCPC*KAPRFC
Trigger: GCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCA...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCTGCTGCTGCCCTTGCTaGAAGGCACCGAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PKPWADVISLRTEFIIFLCCCPC*KAPRFC
Trigger: GCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCA...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTGCTCTCTGAGTCGCTaGAGGAGCTGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYCSLSR*RSCCCR
Trigger: GCGGCAGCAGCAGCTCCTCCAGCGACTCAGAGAGCA...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATCCCAGGGGCCTTGTTaGCTGTCCTTGGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKSQGPC*LSLAFA
Trigger: AGCAAAGGCCAAGGACAGCCAACAAGGCCCCTGGGA...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCTCTCAGAGTCCTTGGTaGCAGGGGCGCTCAATACCC +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCSQSPW*QGRSIP
Trigger: GGGTATTGAGCGCCCCTGCCACCAAGGACTCTGAGA...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAACGCTCTCAGAGTCCTTaGTGGCAGGGGCGCTCAATA +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKRSQSP*WQGRSI
Trigger: TATTGAGCGCCCCTGCCACCAAGGACTCTGAGAGCG...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAATTTCCTCTTGGATTTTaGCAAAGCCTTTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQFPLGF*QSLFCR
Trigger: CCTGCAGAAAAGGCTTTGCCAAAATCCAAGAGGAAA...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACTTTCCTCTTGGATTTTaGCAAAGCCTTTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHFPLGF*QSLFCR
Trigger: CCTGCAGAAAAGGCTTTGCCAAAATCCAAGAGGAAA...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCAGACAAAGTATTACTaGTGGAGGTGGCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPQTKYY*WRWPVL
Trigger: CAAGACTGGCCACCTCCACCAGTAATACTTTGTCTG...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCGAATACTTTACAGCGTaGTCCCTTTTGAGTCGAAAC +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETEYFTA*SLLSRN
Trigger: GTTTCGACTCAAAAGGGACCACGCTGTAAAGTATTC...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAGGGAGACATGGGGGATaGGGTTCCAGTGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKGRHGG*GSSALS
Trigger: GGAAAGAGCACTGGAACCCCATCCCCCATGTCTCCC...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCACAGGGCGCTGGCGTTaGAGAGGCTGCCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGTGRWR*RGCPET
Trigger: GGTCTCAGGGCAGCCTCTCCAACGCCAGCGCCCTGT...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCATTGGCCGCCATCTGGTaGATGCGCTGTGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSLAAIW*MRCGML
Trigger: CAGCATCCCACAGCGCATCCACCAGATGGCGGCCAA...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCATGGTTGGCCGCCATCTaGTGGATGCGCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSWLAAI*WMRCGM
Trigger: CATCCCACAGCGCATCCACCAGATGGCGGCCAACCA...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCATTCTCGGTTTTCCTTaGCCAGGTTGTCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIILGFP*PGCRPS
Trigger: AGATGGCCGACAACCTGGCCAAGGAAAACCGAGAAT...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTCCCTGTTGGGAGTACTaGACCAGGTGCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLPCWEY*TRCSML
Trigger: CAGCATGGAGCACCTGGTCCAGTACTCCCAACAGGG...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCCAGTGCAGGCCCTGTTaGGAGTACTGGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PKPWADVISLRTEFIIFLQCRPC*EYWTRC
Trigger: GCACCTGGTCCAGTACTCCCAACAGGGCCTGCACTG...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACACGTTGAGCCATCTGTaGAGACCAGAGCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDTLSHL*RPEPTL
Trigger: CAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGT...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTCTAGCCTGGGATTATaGAAACTAGACAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNSSLGL*KLDKEG
Trigger: ACCTTCTTTGTCTAGTTTCCATAATCCCAGGCTAGA...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAAATGCATGTGGCTGGTaGGCTTGTTATCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGNACGW*ACYHRC
Trigger: GCACCTGTGATAACAAGCCCACCAGCCACATGCATT...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCAATGCATGTGGCTGGTaGGCTTGTTATCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLINACGW*ACYHRC
Trigger: GCACCTGTGATAACAAGCCCACCAGCCACATGCATT...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACAAGAAGAAATGCATGTaGCTGGTGGGCTTGTTATCA +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHKKKCM*LVGLLS
Trigger: TGATAACAAGCCCACCAGCCACATGCATTTCTTCTT...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGCTGACAAATGCCATGTaGCTCTACAGCCACCGAGTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLLTNAM*LYSHRV
Trigger: GACTCGGTGGCTGTAGAGCCACATGGCATTTGTCAG...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACAAGAAGCACCCCAGTTaGAGACATGTAAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNKKHPS*RHVKWK
Trigger: TTTCCATTTTACATGTCTCCAACTGGGGTGCTTCTT...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATGTAATCACAACACTTTaGGAGGTGGAGGCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHVITTL*EVEAGR
Trigger: TCTACCCGCCTCCACCTCCCAAAGTGTTGTGATTAC...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGCAACTTTCAAGGTaGGCAGGACCAGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSLQLSR*AGPEKL
Trigger: GAGCTTCTCTGGTCCTGCCCACCTTGAAAGTTGCAG...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAGGCCCACCTGTCAAATaGGGCTTCACAGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAGPPVK*GFTGKL
Trigger: GAGCTTCCCTGTGAAGCCCCATTTGACAGGTGGGCC...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATTTTTCCTGGGAAATGTaGGCCATCAGAGTGCTGATA +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNFSWEM*AIRVLI
Trigger: TATCAGCACTCTGATGGCCCACATTTCCCAGGAAAA...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTGTGGCTCATGCACTTTaGGAGGCCGAGGCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLVAHAL*EAEAKG
Trigger: TCCTTTGGCCTCGGCCTCCCAAAGTGCATGAGCCAC...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTATCAAACTGTGAGCAGTaGTTGTCTCAGGCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVSNCEQ*LSQAEG
Trigger: CCCTTCTGCCTGAGACAACCACTGCTCACAGTTTGA...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCATTCACAGAAATTGGTaGATGTCTTTTACGTACAAC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAIHRNW*MSFTYN
Trigger: GTTGTACGTAAAAGACATCCACCAATTTCTGTGAAT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTTTGAATCTAAGGACATaGGCTGGATCAGGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTLNLRT*AGSGEG
Trigger: CCCTTCACCTGATCCAGCCCATGTCCTTAGATTCAA...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAACTACATCAATACCCCTaGTGCTTCAACACAAATGCT +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQLHQYP*CFNTNA
Trigger: AGCATTTGTGTTGAAGCACCAGGGGTATTGATGTAG...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGATGGGGAGTGGTCTTTaGGCTTTTCTCAAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: LGDHSSSCTEETFHFSTTMGSGL*AFLKGV
Trigger: TACTCCTTTGAGAAAAGCCCAAAGACCACTCCCCAT...CGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGGTTCTGGGCTCTTaGATCTGCAACAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPLVLGS*ICNKMF
Trigger: GAACATTTTGTTGCAGATTCAAGAGCCCAGAACCAG...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAAGGGACTCCCCTGTATaGTGTGCAGTGCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSRDSPV*CAVHAG
Trigger: ACCAGCGTGCACTGCACATCATACAGGGGAGTCCCT...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCCCTGCTTGGGGATGCTaGACTTGGAGAGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCPAWGC*TWRAWP
Trigger: AGGCCAAGCTCTCCAAGTTCAGCATCCCCAAGCAGG...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp ACGTCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGTTTCAATGGTCAGTGACTTTGCCAGGTGCTTaGATAGCAGAAAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: TSCRRSDVAENTGFQWSVTLPGA*IAESGG
Trigger: TCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGT...CACTGACCATTGAAACCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR TCA 90 bp GGGAAGCAAGGCACGTCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGTTTCCAGAGGATACAAGCTaGGAGTCCTTATTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: GKQGTSCRRSDVAENTGFPEDTS*ESLFGN
Trigger: ATTTCCAAATAAGGACTCTCAGCTTGTATCCTCTGG...AAACCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGACGTGCCTTGCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR TCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAACGACTCTGTCTCAATaGACTCCTTGGATTTGGGGA +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGTTLSQ*TPWIWG
Trigger: TCCCCAAATCCAAGGAGTTCATTGAGACAGAGTCGT...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATACGACTCTGTCTCAATaGACTCCTTGGATTTGGGGA +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHTTLSQ*TPWIWG
Trigger: TCCCCAAATCCAAGGAGTTCATTGAGACAGAGTCGT...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTGTATTGCCACACTGTTaGTGTTCATGTTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPVLPHC*CSCCSG
Trigger: ACCACTGCAACATGAACATCAACAGTGTGGCAATAC...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCATGCATCAGAGAGGGGTaGGATGGGCGACCGAAGCAT +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSCIREG*DGRPKH
Trigger: ATGCTTCGGTCGCCCATCTCACCCCTCTCTGATGCA...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTTTGCTGGAAGAGGCTaGAGTAAACAAACTGTTGCC +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPFAGRG*SKQTVA
Trigger: GGCAACAGTTTGTTTACTTCAGCCTCTTCCAGCAAA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAATTTTCAGAATTGTTGTaGGCTGCTTTCGTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKFSELL*AAFVRS
Trigger: AGACCTCACGAAAGCAGCTCACAACAATTCTGAAAA...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGAGCTCTACTGTTTCTaGATACATCGTATAAGGAGA +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHELYCF*IHRIRR
Trigger: TCTCCTTATACGATGTATTCAGAAACAGTAGAGCTC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCACAGCGTGGTCCCTTTTaGGTCGAAACATCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAQRGPF*VETSAS
Trigger: ACTGGCGGATGTTTCGACTCAAAAGGGACCACGCTG...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTTGCGCTGTGGGATGCTaGCGATGGTCGACGGGGACA +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLICAVGC*RWSTGT
Trigger: TGTCCCCGTCGACCATCGTCAGCATCCCACAGCGCA...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGTGCGCTGTGGGATGCTaGCGATGGTCGACGGGGACA +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQCAVGC*RWSTGT
Trigger: TGTCCCCGTCGACCATCGTCAGCATCCCACAGCGCA...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTAGGGTGAGGTCCCTATaGCAGGTGGGCGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIRVRSL*QVGAVP
Trigger: CGGAACAGCGCCCACCTGTCATAGGGACCTCACCCT...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTAGTGTCCAAAAACGTTaGGCCATCTGTGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVSVQKR*AICGDQ
Trigger: CTGGTCTCCACAGATGGCTCAACGTTTTTGGACACT...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATCCCAGAAAGGAACTGTaGTCTTCTGCATTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHPRKEL*SSALQA
Trigger: TGCTTGCAATGCAGAAGATCACAGTTCCTTTCTGGG...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATGTGCCGTCATCACCTTaGAAAAATGGATTGCACCAC +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHVPSSP*KNGLHH
Trigger: GTGGTGCAATCCATTTTTTCAAGGTGATGACGGCAC...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACAAGAACTACACGCTCTaGCCACTGCCCACAACGGTA +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDKNYTL*PLPTTV
Trigger: TACCGTTGTGGGCAGTGGTCAGAGCGTGTAGTTCTT...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTAAGGATATGGTCAGTTaGACTTGTGTTGAACTTTGG +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTKDMVS*TCVELW
Trigger: CCAAAGTTCAACACAAGTTCAACTGACCATATCCTT...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGACTGCACTTCCAAGTTaGTGCGAACACGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLTALPS*CEHAVT
Trigger: AGTCACTGCGTGTTCGCATCAACTTGGAAGTGCAGT...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATGCAGATTACTGGGTCTaGAGAGTGTCTACATTGTTA +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYADYWV*RVSTLL
Trigger: TAACAATGTAGACACTCTTCAGACCCAGTAATCTGC...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp AATAAGTATGCGCTTGCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGCTGCTGGCTGATGACTaGAATTCCACAACTAGAGAG +
Preference number: 4 (lower is better)
Translates to: NKYALANCEGSDSRASGRLLADD*NSTTRE
Trigger: CTCTCTAGTTGTGGAATTTCAGTCATCAGCCAGCAG...CCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGCAAGCGCATACTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACTTGTGTGCAGTTCCCTaGCTGCACACAAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDLCAVP*LHTSQG
Trigger: TCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAA...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCTGAGAATGGGAAAATaGGGACATAAACTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRLRMGK*GHKLWF
Trigger: GAACCAGAGTTTATGTCCTCATTTTCCCATTCTCAG...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp AATAAGTATGCGCTTGCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGTCTATGAAAATGCTCTaGAGTGCTGGTCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: NKYALANCEGSDSRASGRSMKML*SAGLGQ
Trigger: CTGGCCAAGACCAGCACTTCAGAGCATTTTCATAGA...CCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGCAAGCGCATACTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp GAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTGAAATGCCTGCATGAGTaGAACATATTCCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ETTVLPAQRKPSISPQRLKCLHE*NIFLLR
Trigger: CCTCAGGAGGAATATGTTTCACTCATGCAGGCATTT...CAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTCTGCACGGGGACAGCTaGTGGTGTGGAAGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLLHGDS*WCGSCS
Trigger: ACTACAACTTCCACACCAGCAGCTGTCCCCGTGCAG...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAACTGCACGGGGACAGCTaGTGGTGTGGAAGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKLHGDS*WCGSCS
Trigger: ACTACAACTTCCACACCAGCAGCTGTCCCCGTGCAG...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTTGTTTGGCCCGAGGCTaGTGTCTGCCAACACCATCT +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLICLARG*CLPTPS
Trigger: AGATGGTGTTGGCAGACAGCAGCCTCGGGCCAAACA...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCATACGCGGTCGGTTTCTaGTGGACCAGGCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAYAVGF*WTRLGF
Trigger: AAAACCCAGCCTGGTCCAGCAGAAACCGACCGCGTA...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TATAAAGAAACAAATTTAATTGACTCACAGTTCCACATGGCTGGGGAGGCCTCACTCCCCTGTATGATGTaGAGTGCACGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: YKETNLIDSQFHMAGEASLPCMM*SARWFP
Trigger: CGGAAACCAGCGTGCACTGCACATCATACAGGGGAG...TGAGGCCTCCCCAGCCATGTGGAACTGTGAGTCAATTAAATTTGTTTCTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR GCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATTTGATGTATTCGATGTaGCATTGTCTGGACTCTCTG +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYLMYSM*HCLDSL
Trigger: CAGAGAGTCCAGACAATGGCACATCGAATACATCAA...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATCACTCTCGCTGGAGCTaGTCTCGGTCTCCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYHSRWS*SRSPSQ
Trigger: CTGACTCGGAGACCGAGAGCAGCTCCAGCGAGAGTG...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAGGTTGTAGTACTGATTaGTCTCTGACCCGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGGCSTD*SLTRGF
Trigger: AAAGCCACGGGTCAGAGAGCAATCAGTACTACAACC...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGCTGTCCTTGGCCTTTaGTCCTCCTTGCAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIAVLGL*SSLQVL
Trigger: GAGCACTTGCAAGGAGGAGCAAAGGCCAAGGACAGC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGGCTCGCTCTGTTGTTaGCACAGGGCCTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSGSLCC*HRAWFW
Trigger: CCAAAACCAGGCCCTGTGGCAACAACAGAGCGAGCC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAAGGAGCGCAGCTCCTTaGGGTGGCTCGCTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: MRISFSAESLIALHSMCSRSAAP*GGSLCC
Trigger: ACAACAGAGCGAGCCACCGCAAGGAGCTGCGCTCCT...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGAGAGGGTACTCCTCCTaGTCGGACTCCAGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMRGYSS*SDSRSE
Trigger: CTCCGACCTGGAGTCCGAGCAGGAGGAGTACCCTCT...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTGACCACGGCTTCGTCTaGGGCCGTGACTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIDHGFV*GRDLWR
Trigger: CCTCCACAAGTCACGGCCGCAGACGAAGCCGTGGTC...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGGGGCCTTGTTCCATTaGATTTCCACACTCGATAAA +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNGALFH*ISTLDK
Trigger: TTTATCGAGTGTGGAAATGCAATGGAACAAGGCCCC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGAGTACTGGACCAGGTaGTCCATGCTGCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSEYWTR*SMLLCR
Trigger: CCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCACATACAAACACACATaGCCTGCAAAAGATCATTGT +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGTYKHT*PAKDHC
Trigger: ACAATGATCTTTTGCAGGGCATGTGTGTTTGTATGT...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAATTTGGTGTGCTGTATTaGACCTGGTTAACTAACCCA +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKFGVLY*TWLTNP
Trigger: TGGGTTAGTTAACCAGGTGCAATACAGCACACCAAA...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGCTTGTTATCACAGGTaGAGAAAACTTCAACTCCTA +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHACYHR*RKLQLL
Trigger: TAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGAAGCTCTCCAGGTATaGAGGATAGACCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIEALQV*RIDLQG
Trigger: GCCCTGGAGGTCTATCCTGCATACCTGGAGAGCTTC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAACGTGCTCCACACGTaGTCCACAGATGAAACAAGA +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVNVLHT*STDETR
Trigger: TCTTGTTTCATCTGTGGAGCACGTGTGGAGCACGTT...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTACTGCTGTACCAACGTaGTCCACACGTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLTAVPT*STRAPQ
Trigger: CTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGT...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCACTGCTGTACCAACGTaGTCCACACGTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCTAVPT*STRAPQ
Trigger: CTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGT...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTGAGACACTCCTGCATCTaGTGGCTGATGACTGAAATT +
Preference number: 4 (lower is better)
Translates to: ETTVLPAQRKPSISPQRLRHSCI*WLMTEI
Trigger: AATTTCAGTCATCAGCCAGCAGATGCAGGAGTGTCT...CAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTGTGCATGTGCATACGTaGATGCATGTGCGCGCGTGT +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLVHVHT*MHVRAC
Trigger: ACACGCGCGCACATGCATGCACGTATGCACATGCAC...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAAGGACTCAACTGAACTaGCCATCTGCAAACAAACCC +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGRTQLN*PSANKP
Trigger: GGGTTTGTTTGCAGATGGGCAGTTCAGTTGAGTCCT...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACAAATTTACCCCCTGCTaGCTCGGAGTGCCAATTAAA +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNKFTPC*LGVPIK
Trigger: TTTAATTGGCACTCCGAGGCAGCAGGGGGTAAATTT...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTTGGCGTTGGAGAGGCTaGCCTGAGACCCCACGGAGT +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIWRWRG*PETPRS
Trigger: ACTCCGTGGGGTCTCAGGGCAGCCTCTCCAACGCCA...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445815.2
ENST00000671937.1
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGGGACAAACTGGCCTCTaGGTGTCGACTTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLGQTGL*VSTSNL
Trigger: CAAGTTTGAAGTCGACACCCAGAGGCCAGTTTGTCC...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGCAGATAGACGAGGGCTaGTTCTGGGCTCTTGAATCT +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQQIDEG*FWALES
Trigger: AGATTCAAGAGCCCAGAACCAGCCCTCGTCTATCTG...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAACATTGCACACTTGTTTaGCCCGAGGCTGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKHCTLV*PEAAVC
Trigger: GCAGACAGCAGCCTCGGGCCAAACAAGTGTGCAATG...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTCAGGCTCCGGCTTGCTaGCAGGGACTCCCCTGTATG +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIQAPAC*QGLPCM
Trigger: CATACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTG...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTATTGAATAGCAGAAAGTaGTGGAAGCCAGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLLNSRK*WKPGHL
Trigger: GAGATGACCTGGCTTCCACCACTTTCTGCTATTCAA...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTCATGGGGAGTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATAAAATGGAAATTTGGTTaGTTCCACTTTGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SHGEWSLGFSQRSTPHWIKWKFG*FHFARC
Trigger: GCACCTGGCAAAGTGGAACCAACCAAATTTCCATTT...TATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCACTCCCCATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp AAGGGGAAGCAAGGCACGTCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGTTGGAAATGGAAATTTaGTTGGTTCCACTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: KGKQGTSCRRSDVAENTGLEMEI*LVPLCQ
Trigger: CTGGCAAAGTGGAACCAACCAAATTTCCATTTCCAA...CCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGACGTGCCTTGCTTCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCGTCCTTATTTGGAAATaGAAATTTGGTTGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGVLIWK*KFGWFH
Trigger: GTGGAACCAACCAAATTTCCATTTCCAAATAAGGAC...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAATGCATCACCTTTCTTTaGATTATTGTGTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDECITFL*IIVSRG
Trigger: TCCTCTGGACACAATAATCCAAAGAAAGGTGATGCA...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACCGATGTGCCATTGTCTaGACTCTCTGGCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDRCAIV*TLWLCI
Trigger: GATGCAGAGCCAGAGAGTCCAGACAATGGCACATCG...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAACTTTCCCACAGTCCTaGACGTCCTCTTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRATFPQS*TSSFTG
Trigger: CCCGGTGAAAGAGGACGTCCAGGACTGTGGGAAAGT...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAACTTTCCCACAGTCCTaGACGTCCTCTTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKTFPQS*TSSFTG
Trigger: CCCGGTGAAAGAGGACGTCCAGGACTGTGGGAAAGT...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATCGCAGCTCCTTGCGGTaGCTCGCTCTGTTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYRSSLR*LALLLP
Trigger: TGGCAACAACAGAGCGAGCCACCGCAAGGAGCTGCG...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCCCACGGTCTGTGCTTTaGACAGAGGGTACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCPRSVL*TEGTPP
Trigger: AGGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGG...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTGGCGCTCAATACCCCTaGCTCCTGGGGCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: RISVNVYGSASSLSILCRGAQYP*LLGQVF
Trigger: GAACACCTGCCCCAGGAGCCAGGGGTATTGAGCGCC...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCATCTCAGAGTCCTTGGTaGCAGGGGCGCTCAATACCC +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSSQSPW*QGRSIP
Trigger: GGGTATTGAGCGCCCCTGCCACCAAGGACTCTGAGA...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATTATTACTGGTGGAGGTaGCCAGTCTTGAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHYYWWR*PVLKSC
Trigger: ACAGCTCTTCAAGACTGGCCACCTCCACCAGTAATA...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTACAAAGTATTACTGGTaGAGGTGGCCAGTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPTKYYW*RWPVLK
Trigger: CTTCAAGACTGGCCACCTCCACCAGTAATACTTTGT...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTTGCGGCCGTGACTTGTaGAGGGGAATGTTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIICGRDL*RGMFSE
Trigger: TTCTGAAAACATTCCCCTCCACAAGTCACGGCCGCA...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGAGATTTGGATTCCATaGGGCCTTGTTCCATTGCAT +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNEIWIP*GLVPLH
Trigger: ATGCAATGGAACAAGGCCCCATGGAATCCAAATCTC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTGAGATTTGGATTCCATaGGGCCTTGTTCCATTGCAT +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPEIWIP*GLVPLH
Trigger: ATGCAATGGAACAAGGCCCCATGGAATCCAAATCTC...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTCTTCTGGTGTGGCATTaGGGCCTGAGTGGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVLLVWH*GLSGFL
Trigger: TAAAAACCCACTCAGGCCCCAATGCCACACCAGAAG...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCGTTTGTCTTCTGGTGTaGCATTGGGGCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCVCLLV*HWGLSG
Trigger: CCCACTCAGGCCCCAATGCCACACCAGAAGACAAAC...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAACACGGAGATGGGGCTTaGGCGGCTTTAGATGAGTTC +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKHGDGA*AALDEF
Trigger: GAACTCATCTAAAGCCGCCCAAGCCCCATCTCCGTG...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCGGGAGACATGGGGGATaGGGTTCCAGTGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PKPWADVISLRTEFIIFLGRHGG*GSSALS
Trigger: GGAAAGAGCACTGGAACCCCATCCCCCATGTCTCCC...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCCTGGTGGATGCGCTGTaGGATGCTGACGATGGTCGA +
Preference number: 4 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCLVDAL*DADDGR
Trigger: TCGACCATCGTCAGCATCCCACAGCGCATCCACCAG...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTATTCTCGGTTTTCCTTaGCCAGGTTGTCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVILGFP*PGCRPS
Trigger: AGATGGCCGACAACCTGGCCAAGGAAAACCGAGAAT...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTTCTAGCCTGGGATTATaGAAACTAGACAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTSSLGL*KLDKEG
Trigger: ACCTTCTTTGTCTAGTTTCCATAATCCCAGGCTAGA...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACATTTGCATACTACTTaGAGGTGGGGCTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKHLHTT*RWGWEG
Trigger: CCCTTCCCAGCCCCACCTCCAAGTAGTATGCAAATG...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTAATGCATGTGGCTGGTaGGCTTGTTATCACAGGTGC +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVNACGW*ACYHRC
Trigger: GCACCTGTGATAACAAGCCCACCAGCCACATGCATT...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACCTGACAAATGCCATGTaGCTCTACAGCCACCGAGTC +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDLTNAM*LYSHRV
Trigger: GACTCGGTGGCTGTAGAGCCACATGGCATTTGTCAG...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATAGACTTGAAACAGATTaGCTGACAAATGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYRLETD*LTNAMW
Trigger: CCACATGGCATTTGTCAGCCAATCTGTTTCAAGTCT...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGATAAAACACTGCTaGCCCACCTGTCAAATGGGG +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSLIKHC*PTCQMG
Trigger: CCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAG...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCTCAAACTGTGAGCAGTaGTTGTCTCAGGCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSSNCEQ*LSQAEG
Trigger: CCCTTCTGCCTGAGACAACCACTGCTCACAGTTTGA...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAACTTGTGTTGAACTTTaGAGGCAAATGTACGTCTTC +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDETCVEL*RQMYVF
Trigger: GAAGACGTACATTTGCCTCCAAAGTTCAACACAAGT...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACGATCAGGAATATACCTaGACTACTCTCTTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHDQEYT*TTLFQR
Trigger: CCTTTGAAAGAGAGTAGTCCAGGTATATTCCTGATC...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACTTCGAGATTATAAACTaGGAGCCAGAACAACTGACT +
Preference number: 4 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHFEIIN*EPEQLT
Trigger: AGTCAGTTGTTCTGGCTCCCAGTTTATAATCTCGAA...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAATTCGAGATTATAAACTaGGAGCCAGAACAACTGACT +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEFEIIN*EPEQLT
Trigger: AGTCAGTTGTTCTGGCTCCCAGTTTATAATCTCGAA...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGGATCAGGTGAAGGGATaGTTTTGCTTTTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRDQVKG*FCFCCC
Trigger: ACAGCAACAAAAGCAAAACCATCCCTTCACCTGATC...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR CAA 72 bp AGTGGCAGGAAGAAGAAATGCATGTGGCTGGTGGGCTaGTTATCACAGGTGCAGAAAACTTCAACTCCTAAC +
Preference number: 4 (lower is better)
Translates to: SGRKKKCMWLVG*LSQVQKTSTPN
Trigger: GTTAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CAA 72 bp CATAATGCAGCCAGTTGTTTGTCTTCTGGTGTGGCATaGGGGCCTGAGTGGGTTTTTAGTCTCATAGCATAC +
Preference number: 4 (lower is better)
Translates to: HNAASCLSSGVA*GPEWVFSLIAY
Trigger: GTATGCTATGAGACTAAAAACCCACTCAGGCCCCAATGCCACACCAGAAGACAAACAACTGGCTGCATTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671937.1
CDS-3UTR TCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAATTCATAGACACACAGTaGCTCGAGGTCCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKFIDTQ*LEVPFL
Trigger: CAGGAATGGGACCTCGAGTCACTGTGTGTCTATGAA...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCACTCCCTGGGACTTCTTaGTCTCCCTGTAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRALPGTS*SPCSRL
Trigger: AAGACGACTACAGGGAGATCAAGAAGTCCCAGGGAG...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCATGCATCAGAGAGGGGTaGGATGGGCGACCGAAGCAT +
Preference number: 4 (lower is better)
Translates to: MRISFSAESLIALHSMCSCIREG*DGRPKH
Trigger: ATGCTTCGGTCGCCCATCTCACCCCTCTCTGATGCA...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTCTAGTCAGAAACCTCTaGTCACTTTGTCTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIILVRNL*SLCLAW
Trigger: CCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAG...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATGATTCAGGCTCCTACTaGAGGGACAATCTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHDSGSY*RDNLGN
Trigger: ATTACCTAGATTGTCCCTTCAGTAGGAGCCTGAATC...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCGATTCAGGCTCCTACTaGAGGGACAATCTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIDSGSY*RDNLGN
Trigger: ATTACCTAGATTGTCCCTTCAGTAGGAGCCTGAATC...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCATAGGATGGGATTGTaGACTCTGCCAAAAATTAGT +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYHRMGL*TLPKIS
Trigger: ACTAATTTTTGGCAGAGTTCACAATCCCATCCTATG...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACACTGCACTTCCAAGTTaGTGCGAACACGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDTALPS*CEHAVT
Trigger: AGTCACTGCGTGTTCGCATCAACTTGGAAGTGCAGT...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTGCAGATTACTGGGTCTaGAGAGTGTCTACATTGTTA +
Preference number: 4 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTADYWV*RVSTLL
Trigger: TAACAATGTAGACACTCTTCAGACCCAGTAATCTGC...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATGTGCCTCTCTTACTCTaGTGCACGGGGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYVPLLL*CTGTAA
Trigger: AGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGGCAC...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AATAAGTATGCGCTTGCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGTTCCACTTTGCCAGGTaGTTGAATAGCAGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: NKYALANCEGSDSRASGRFHFAR*LNSRKW
Trigger: CCACTTTCTGCTATTCAAGCACCTGGCAAAGTGGAA...CCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGCAAGCGCATACTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTTGCTGCTGCTGCTGCTaGTGCCCTTGCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLICCCCC*CPCWKA
Trigger: TGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCA...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGGGTTGTAGTACTGATTaGTCTCTGACCCGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLGCSTD*SLTRGF
Trigger: AAAGCCACGGGTCAGAGAGCAATCAGTACTACAACC...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTTGGCAAAGCCTTTTCTaGAGGTGTGTCCGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIWQSLF*RCVRGV
Trigger: CACACCTCGGACACACCTGCAGAAAAGGCTTTGCCA...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACCTTCGTTGTCACACTTaGGTTTCCTCTTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNLRCHT*VSSWIL
Trigger: CAAAATCCAAGAGGAAACGCAAGTGTGACAACGAAG...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATCTCGATAAACGACAATaGTGCTTCAGCATAGTTCAA +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNLDKRQ*CFSIVQ
Trigger: TTGAACTATGCTGAAGCAGCATTGTCGTTTATCGAG...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCAGGGGCCTTGTTCCATTaGATTTCCACACTCGATAAA +
Preference number: 4 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSGALFH*ISTLDK
Trigger: TTTATCGAGTGTGGAAATGCAATGGAACAAGGCCCC...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTCTGTTCCGCAGCCAGTaGAGGCCCTGTTGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLILFRSQ*RPCWEY
Trigger: GTACTCCCAACAGGGCCTGCACTGGCTGCGGAACAG...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCACATACAAACACACATaGCCTGCAAAAGATCATTGT +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETTYKHT*PAKDHC
Trigger: ACAATGATCTTTTGCAGGGCATGTGTGTTTGTATGT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAGGCAGGAAGAAGAAATaGATGTGGCTGGTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKGRKKK*MWLVGL
Trigger: CAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCC...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGAGATTGGCTGACAAATaGCATGTGGCTCTACAGCCA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLRLADK*HVALQP
Trigger: TGGCTGTAGAGCCACATGGCATTTGTCAGCCAATCT...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAAAGGCCAAAGCCAAATaGAAATTCCACAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGKAKAK*KFHKPF
Trigger: GAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTT...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGCCAGGAGGCAGAGGATaGAGTGAGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQPGGRG*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCATCCTCTGCCTCCTGG...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTGTTACAACAAAGTCTaGAACTTTCAAGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPCYNKV*NFQGGQ
Trigger: CTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAAAACCCCACAGAAACTaGTGTACCAACGTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKKPHRN*CTNVLH
Trigger: GTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATGGGACACTGGGAGCGTaGATGTGCATACGTGCATGC +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYGTLGA*MCIRAC
Trigger: GCATGCACGTATGCACATGCACGCTCCCAGTGTCCC...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGTGCAGTTCCCTGACTaGACACAAGTCAGGGAACTA +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDVQFPD*TQVREL
Trigger: TAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCAC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTCTCCCACATAGGGGATaGTTCATGTCAAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLLPHRG*FMSSHW
Trigger: CCAGTGGCTTGACATGAAGCATCCCCTATGTGGGAG...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTACAAAATTTACCCCCTaGTGCCTCGGAGTGCCAATT +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIITKFTP*CLGVPI
Trigger: AATTGGCACTCCGAGGCAGCAGGGGGTAAATTTTGT...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAGAGGAACCCCAGGTTTaGGAACTCCAACGAGATGAC +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKEEPQV*ELQRDD
Trigger: GTCATCTCGTTGGAGTTCCCAAACCTGGGGTTCCTC...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACAGATAGACGAGGGCTaGTTCTGGGCTCTTGAATCT +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKQIDEG*FWALES
Trigger: AGATTCAAGAGCCCAGAACCAGCCCTCGTCTATCTG...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGAATATTTACAGAAGACAGATAGACGAGGGCTaGTTCTGGGCTCTTGAATCT +
Preference number: 4 (lower is better)
Translates to: ANCEGSDSRASGRNIYRRQIDEG*FWALES
Trigger: AGATTCAAGAGCCCAGAACCAGCCCTCGTCTATCTG...TCTTCTGTAAATATTCCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACAATAGCAGAAAGTGGTaGAAGCCAGGTCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDNSRKW*KPGHLP
Trigger: CGGGAGATGACCTGGCTTCCACCACTTTCTGCTATT...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAAATAGCAGAAAGTGGTaGAAGCCAGGTCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKNSRKW*KPGHLP
Trigger: CGGGAGATGACCTGGCTTCCACCACTTTCTGCTATT...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATTTGGAAATGGAAATTTaGTTGGTTCCACTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNLEMEI*LVPLCQ
Trigger: CTGGCAAAGTGGAACCAACCAAATTTCCATTTCCAA...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCCGATGTGCCATTGTCTaGACTCTCTGGCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCRCAIV*TLWLCI
Trigger: GATGCAGAGCCAGAGAGTCCAGACAATGGCACATCG...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTATTACTGGTGGAGGTaGCCAGTCTTGAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLYYWWR*PVLKSC
Trigger: ACAGCTCTTCAAGACTGGCCACCTCCACCAGTAATA...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACAAAGTATTACTGGTaGAGGTGGCCAGTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLITKYYW*RWPVLK
Trigger: CTTCAAGACTGGCCACCTCCACCAGTAATACTTTGT...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATACAAAGTATTACTGGTaGAGGTGGCCAGTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHTKYYW*RWPVLK
Trigger: CTTCAAGACTGGCCACCTCCACCAGTAATACTTTGT...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGCAGACAAAGTATTACTaGTGGAGGTGGCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLQTKYY*WRWPVL
Trigger: CAAGACTGGCCACCTCCACCAGTAATACTTTGTCTG...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAATGCGGCCGTGACTTGTaGAGGGGAATGTTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKCGRDL*RGMFSE
Trigger: TTCTGAAAACATTCCCCTCCACAAGTCACGGCCGCA...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGCTCTTGCAGTCCCTGTaGCCGTTGGAGCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQLLQSL*PLEPGD
Trigger: GTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAG...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAGAGATTTGGATTCCATaGGGCCTTGTTCCATTGCAT +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVEIWIP*GLVPLH
Trigger: ATGCAATGGAACAAGGCCCCATGGAATCCAAATCTC...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTTCTGGTGTGGCATTaGGGCCTGAGTGGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKLLVWH*GLSGFL
Trigger: TAAAAACCCACTCAGGCCCCAATGCCACACCAGAAG...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTGAATACTTTACAGCGTaGTCCCTTTTGAGTCGAAAC +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPEYFTA*SLLSRN
Trigger: GTTTCGACTCAAAAGGGACCACGCTGTAAAGTATTC...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCTGGTTGGCCGCCATCTaGTGGATGCGCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGWLAAI*WMRCGM
Trigger: CATCCCACAGCGCATCCACCAGATGGCGGCCAACCA...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCCAGTGCAGGCCCTGTTaGGAGTACTGGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGQCRPC*EYWTRC
Trigger: GCACCTGGTCCAGTACTCCCAACAGGGCCTGCACTG...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGCAGGTCCATCTTCACTaGCAGTCAAGCTTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLQVHLH*QSSFWC
Trigger: ACACCAAAAGCTTGACTGCCAGTGAAGATGGACCTG...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGAGAAATGCATGTGGCTaGTGGGCTTGTTATCACAGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLRNACG*WACYHR
Trigger: CCTGTGATAACAAGCCCACCAGCCACATGCATTTCT...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGAATCAGCATTATCATaGCAAATAGCTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNESALS*QIALSL
Trigger: CAGGCTGAGAGCTATTTGCCATGATAATGCTGATTC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATGCAACAATTGGAGGATaGTTACTAACCAAAATCACC +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYATIGG*LLTKIT
Trigger: GGTGATTTTGGTTAGTAACCATCCTCCAATTGTTGC...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCGCATCCCAGGGCTACTaGTTGAACAGGAACCCTGTG +
Preference number: 4 (lower is better)
Translates to: PKPWADVISLRTEFIIFLASQGY*LNRNPV
Trigger: CACAGGGTTCCTGTTCAACCAGTAGCCCTGGGATGC...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATGAGTATCAAGCTCAGTaGTTGGTGAAGCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHEYQAQ*LVKQSQ
Trigger: TTGGCTTTGCTTCACCAACCACTGAGCTTGATACTC...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTCATGGGGAGTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATAAGGAGTACACCGCACTaGATATTTATGTCCTTAGTT +
Preference number: 4 (lower is better)
Translates to: SHGEWSLGFSQRSTPHWIRSTPH*IFMSLV
Trigger: AACTAAGGACATAAATATCCAGTGCGGTGTACTCCT...TATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCACTCCCCATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp CACTTTGCCAGGTGCTTGAATAGCAGAAAGTGGTGGAAGCCAGGTCATCTCCTGCACCTTATTTGGAAATaGAAATTTGGTTGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: HFARCLNSRKWWKPGHLLHLIWK*KFGWFH
Trigger: GTGGAACCAACCAAATTTCCATTTCCAAATAAGGTG...CAGGAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTGAGATTCACGTGCCTCTaGCAGGAATATTTACAGAAG +
Preference number: 4 (lower is better)
Translates to: ETTVLPAQRKPSISPQRLRFTCL*QEYLQK
Trigger: CTTCTGTAAATATTCCTGCCAGAGGCACGTGAATCT...CAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CAA 72 bp AAATGGAAATTTGGTTGGTTCCACTTTGCCAGGTGCTaGAATAGCAGAAAGTGGTGGAAGCCAGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: KWKFGWFHFARC*NSRKWWKPGHL
Trigger: GAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTGGAACCAACCAAATTTCCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTTTCATAGACACACAGTaGCTCGAGGTCCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLFIDTQ*LEVPFL
Trigger: CAGGAATGGGACCTCGAGTCACTGTGTGTCTATGAA...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTCTGGTTCTGGGCTCTTaGATCTGCAACAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIILVLGS*ICNKMF
Trigger: GAACATTTTGTTGCAGATTCAAGAGCCCAGAACCAG...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAACTTTGCCAGGTGCTTaGATAGCAGAAAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKTLPGA*IAESGG
Trigger: TCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGT...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCGTATTGCCACACTGTTaGTGTTCATGTTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSVLPHC*CSCCSG
Trigger: ACCACTGCAACATGAACATCAACAGTGTGGCAATAC...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGTATTGCCACACTGTTaGTGTTCATGTTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVVLPHC*CSCCSG
Trigger: ACCACTGCAACATGAACATCAACAGTGTGGCAATAC...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGTGCATCAGAGAGGGGTaGGATGGGCGACCGAAGCAT +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQCIREG*DGRPKH
Trigger: ATGCTTCGGTCGCCCATCTCACCCCTCTCTGATGCA...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGCAGATCCAGGTCGTTaGAGAATTCTCGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDADPGR*RILGFP
Trigger: AGGAAAACCGAGAATTCTTCAACGACCTGGATCTGC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTAGTGTCCAAAAACGTTaGGCCATCTGTGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLISVQKR*AICGDQ
Trigger: CTGGTCTCCACAGATGGCTCAACGTTTTTGGACACT...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCACTTCAACTCCTAACTaGGCTCCAACACACAGGCAC +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCTSTPN*APTHRH
Trigger: GTGCCTGTGTGTTGGAGCTCAGTTAGGAGTTGAAGT...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTACTTCAACTCCTAACTaGGCTCCAACACACAGGCAC +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLITSTPN*APTHRH
Trigger: GTGCCTGTGTGTTGGAGCTCAGTTAGGAGTTGAAGT...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTACATAGGATGGGATTGTaGACTCTGCCAAAAATTAGT +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLHRMGL*TLPKIS
Trigger: ACTAATTTTTGGCAGAGTTCACAATCCCATCCTATG...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAACTGCACTTCCAAGTTaGTGCGAACACGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRATALPS*CEHAVT
Trigger: AGTCACTGCGTGTTCGCATCAACTTGGAAGTGCAGT...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTGCTGGCTGATGACTaGAATTCCACAACTAGAGAG +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKLLADD*NSTTRE
Trigger: CTCTCTAGTTGTGGAATTTCAGTCATCAGCCAGCAG...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409579.5
CDS-3UTR TCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCACTGTGGCCATTGAGATaGCCTTCTCAAGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRALWPLR*PSQASC
Trigger: ACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAG...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGACTCTCTAGACACGAGTaGGTTATGTCAGATGGTATA +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGLSRHE*VMSDGI
Trigger: TATACCATCTGACATAACTCACTCGTGTCTAGAGAG...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGAGCACAAACCACCTCTaGAAGAGTATCAAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQSTNHL*KSIKLS
Trigger: ACTGAGCTTGATACTCTTTCAGAGGTGGTTTGTGCT...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGAGAAGAGAACGTTCTTaGAAGACTGCTGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLRRERS*KTAGCF
Trigger: GAAACACCCAGCAGTCTTTCAAGAACGTTCTCTTCT...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAAAAACTGTGCTCTTCTaGGAATGGGAAAATGAGGAC +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGKTVLF*EWENED
Trigger: GTCCTCATTTTCCCATTCTCAGAAGAGCACAGTTTT...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCTCATTTCATCATAATTaGCTAAAGTGTTCTGGATCC +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETSFHHN*LKCSGS
Trigger: GGATCCAGAACACTTTAGGCAATTATGATGAAATGA...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGTGTTTGGCCCGAGGCTaGTGTCTGCCAACACCATCT +
Preference number: 4 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMCLARG*CLPTPS
Trigger: AGATGGTGTTGGCAGACAGCAGCCTCGGGCCAAACA...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCGGCCCACCTCCACATTaGACACTTGTTTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGGPPPH*TLVWPE
Trigger: CTCGGGCCAAACAAGTGTGCAATGTGGAGGTGGGCC...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTTGGACTCTCTGGCTCTaGATCACCTTTCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVWTLWL*ITFLWI
Trigger: AATCCAAAGAAAGGTGATGCAGAGCCAGAGAGTCCA...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTGATGTATTCGATGTaGCATTGTCTGGACTCTCTG +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGLMYSM*HCLDSL
Trigger: CAGAGAGTCCAGACAATGGCACATCGAATACATCAA...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATGCTGTCCTTGGCCTTTaGTCCTCCTTGCAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYAVLGL*SSLQVL
Trigger: GAGCACTTGCAAGGAGGAGCAAAGGCCAAGGACAGC...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCATGGCAAAGCCTTTTCTaGAGGTGTGTCCGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSWQSLF*RCVRGV
Trigger: CACACCTCGGACACACCTGCAGAAAAGGCTTTGCCA...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTACTTCGTTGTCACACTTaGGTTTCCTCTTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVLRCHT*VSSWIL
Trigger: CAAAATCCAAGAGGAAACGCAAGTGTGACAACGAAG...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCATGTTGCAGTGGTTTaGAGACAAAGTATTACTGGT +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPHVAVV*RQSITG
Trigger: ACCAGTAATACTTTGTCTGCAAACCACTGCAACATG...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ACAGGAGGGCCAGGCATCGGTAACATAATGCAGCCAGTTGTTTGTCTTCTGGTGATTGCATCTGCTTTATaGTTCATTCGTTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TGGPGIGNIMQPVVCLLVIASAL*FIRLAS
Trigger: AGAAGCTAAACGAATGAAGCATAAAGCAGATGCAAT...CACCAGAAGACAAACAACTGGCTGCATTATGTTACCGATGCCTGGCCCTCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
CDS-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAATTGCATCTGCTTTATaGTTCATTCGTTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEIASAL*FIRLAS
Trigger: AGAAGCTAAACGAATGAAGCATAAAGCAGATGCAAT...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTGATAAACGACAATGCTaGTTCAGCATAGTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPDKRQC*FSIVQS
Trigger: GCTTTGAACTATGCTGAAGCAGCATTGTCGTTTATC...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCGGGGCCTTGTTCCATTaGATTTCCACACTCGATAAA +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSGALFH*ISTLDK
Trigger: TTTATCGAGTGTGGAAATGCAATGGAACAAGGCCCC...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGGGGCCTTGTTCCATTaGATTTCCACACTCGATAAA +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVGALFH*ISTLDK
Trigger: TTTATCGAGTGTGGAAATGCAATGGAACAAGGCCCC...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCGAGTACTGGACCAGGTaGTCCATGCTGCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGEYWTR*SMLLCR
Trigger: CCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTC...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTTGGTGTGCTGTATTaGACCTGGTTAACTAACCCA +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGFGVLY*TWLTNP
Trigger: TGGGTTAGTTAACCAGGTGCAATACAGCACACCAAA...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGGGTATTTGGTAACATaGAATCTAGTAAACTTCCGG +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNGYLVT*NLVNFR
Trigger: CCGGAAGTTTACTAGATTGCATGTTACCAAATACCC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTGCTTGTTATCACAGGTaGAGAAAACTTCAACTCCTA +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPACYHR*RKLQLL
Trigger: TAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGC...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGGCAGGAAGAAGAAATaGATGTGGCTGGTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSGRKKK*MWLVGL
Trigger: CAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCGGCAGGAAGAAGAAATaGATGTGGCTGGTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PKPWADVISLRTEFIIFLGRKKK*MWLVGL
Trigger: CAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCC...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCTGTGATCTTCTGCATTaGAAGCAGCCTGCTAATCAA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLICDLLH*KQPANQ
Trigger: TTGATTAGCAGGCTGCTTGCAATGCAGAAGATCACA...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAACATATTACACCGCCTaGCTTTCTCAGACCGTCCTG +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRATYYTA*LSQTVL
Trigger: CAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACCTTAATATTTCCAAATaGTTGAAGGCCAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHLNISK*LKAKAK
Trigger: TTTGGCTTTGGCCTTCAAGCATTTGGAAATATTAAG...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTAAACCCCACAGAAACTaGTGTACCAACGTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLKPHRN*CTNVLH
Trigger: GTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTAACCAAAATCACCCATaGCAAACCCCACAGAAACTG +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIINQNHP*QTPQKL
Trigger: CAGTTTCTGTGGGGTTTGGCATGGGTGATTTTGGTT...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TTTCAAACAAGCCAACTTCCTAATTACAATGGAGAGGGAACTGGCATGAGGAAGGTTCATAGACACTCCTaGATCTGCTGGCTGATGACT +
Preference number: 4 (lower is better)
Translates to: FQTSQLPNYNGEGTGMRKVHRHS*ICWLMT
Trigger: AGTCATCAGCCAGCAGATGCAGGAGTGTCTATGAAC...CTTCCTCATGCCAGTTCCCTCTCCATTGTAATTAGGAAGTTGGCTTGTTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCGGGACACTGGGAGCGTaGATGTGCATACGTGCATGC +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGGTLGA*MCIRAC
Trigger: GCATGCACGTATGCACATGCACGCTCCCAGTGTCCC...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGTGCAGTTCCCTGACTaGACACAAGTCAGGGAACTA +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIVQFPD*TQVREL
Trigger: TAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCAC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACGTTCTTGAAAGACTaGTGGGTGTTTCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLITFLKD*WVFLST
Trigger: TGTGCTAAGAAACACCCAGCAGTCTTTCAAGAACGT...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AATAAGTATGCGCTTGCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGTTTCTCCACAACGTTTaGTTGATCCTACTTGACTCC +
Preference number: 4 (lower is better)
Translates to: NKYALANCEGSDSRASGRFLHNV*LILLDS
Trigger: GGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAA...CCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGCAAGCGCATACTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCTGTTCTGGATCCGGTTaGAGAGTTCATCCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCCSGSG*RVHPPC
Trigger: ACAAGGGGGATGAACTCTCCAACCGGATCCAGAACA...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTTTGCCTAAAGTGTTCTaGATCCGGTTGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVLPKVF*IRLESS
Trigger: TGAACTCTCCAACCGGATCCAGAACACTTTAGGCAA...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCGAGGAACCCCAGGTTTaGGAACTCCAACGAGATGAC +
Preference number: 4 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCEEPQV*ELQRDD
Trigger: GTCATCTCGTTGGAGTTCCCAAACCTGGGGTTCCTC...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCATGTGCAGTGCACGCTaGTTTCCGAAGACGACTTCA +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCMCSAR*FPKTTS
Trigger: TGAAGTCGTCTTCGGAAACCAGCGTGCACTGCACAT...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTATGTGCAGTGCACGCTaGTTTCCGAAGACGACTTCA +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIMCSAR*FPKTTS
Trigger: TGAAGTCGTCTTCGGAAACCAGCGTGCACTGCACAT...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCAATAGCAGAAAGTGGTaGAAGCCAGGTCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCNSRKW*KPGHLP
Trigger: CGGGAGATGACCTGGCTTCCACCACTTTCTGCTATT...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTAGAATAGGAGGCTTGTaGGGATTAACTTTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPRIGGL*GLTLFS
Trigger: GCTAAACAAAGTTAATCCCCACAAGCCTCCTATTCT...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTTGCTCTCTGACCCGTaGCTTTCATTTTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLLLSDP*LSFWIR
Trigger: TCTGATCCAAAATGAAAGCCACGGGTCAGAGAGCAA...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACTTGTTGGCTGTCCTTaGCCTTTGCTCCTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSLVGCP*PLLLLA
Trigger: TGCAAGGAGGAGCAAAGGCCAAGGACAGCCAACAAG...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGACAAAGTATTACTGGTaGAGGTGGCCAGTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLTKYYW*RWPVLK
Trigger: CTTCAAGACTGGCCACCTCCACCAGTAATACTTTGT...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTATGTTCATGTTGCAGTaGTTTGCAGACAAAGTATTA +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTMFMLQ*FADKVL
Trigger: TAATACTTTGTCTGCAAACCACTGCAACATGAACAT...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGCATTGGGGCCTGAGTaGGTTTTTAGTCTCATAGCA +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDALGPE*VFSLIA
Trigger: TGCTATGAGACTAAAAACCCACTCAGGCCCCAATGC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCCTTCTGGTGTGGCATTaGGGCCTGAGTGGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCLLVWH*GLSGFL
Trigger: TAAAAACCCACTCAGGCCCCAATGCCACACCAGAAG...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTCTTCTGGTGTGGCATTaGGGCCTGAGTGGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLILLVWH*GLSGFL
Trigger: TAAAAACCCACTCAGGCCCCAATGCCACACCAGAAG...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATGAATACTTTACAGCGTaGTCCCTTTTGAGTCGAAAC +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHEYFTA*SLLSRN
Trigger: GTTTCGACTCAAAAGGGACCACGCTGTAAAGTATTC...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTCTGGTGGATGCGCTGTaGGATGCTGACGATGGTCGA +
Preference number: 4 (lower is better)
Translates to: RISVNVYGSASSLSILCRLVDAL*DADDGR
Trigger: TCGACCATCGTCAGCATCCCACAGCGCATCCACCAG...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAATTCTCGGTTTTCCTTaGCCAGGTTGTCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKILGFP*PGCRPS
Trigger: AGATGGCCGACAACCTGGCCAAGGAAAACCGAGAAT...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCAAGAAGAAATGCATGTaGCTGGTGGGCTTGTTATCA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIKKKCM*LVGLLS
Trigger: TGATAACAAGCCCACCAGCCACATGCATTTCTTCTT...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCCTGCAACTTTCAAGGTaGGCAGGACCAGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PKPWADVISLRTEFIIFLLQLSR*AGPEKL
Trigger: GAGCTTCTCTGGTCCTGCCCACCTTGAAAGTTGCAG...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTTTTTCCTGGGAAATGTaGGCCATCAGAGTGCTGATA +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVFSWEM*AIRVLI
Trigger: TATCAGCACTCTGATGGCCCACATTTCCCAGGAAAA...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAAGAAGTTTTCCTaGGAAATGTGGGCCATCAGA +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGFKKFS*EMWAIR
Trigger: TCTGATGGCCCACATTTCCCAGGAAAACTTCTTGAA...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTGCAACAATTGGAGGATaGTTACTAACCAAAATCACC +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPATIGG*LLTKIT
Trigger: GGTGATTTTGGTTAGTAACCATCCTCCAATTGTTGC...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTGTGGCTCATGCACTTTaGGAGGCCGAGGCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: RISVNVYGSASSLSILCRVAHAL*EAEAKG
Trigger: TCCTTTGGCCTCGGCCTCCCAAAGTGCATGAGCCAC...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTACTTGTGTTGAACTTTaGAGGCAAATGTACGTCTTC +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPTCVEL*RQMYVF
Trigger: GAAGACGTACATTTGCCTCCAAAGTTCAACACAAGT...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAGGTCATGGAAGGATATaGTCAGTTGAACTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVGHGRI*SVELVL
Trigger: CAACACAAGTTCAACTGACCATATCCTTCCATGACC...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGCCAGAGGATACAAGCTaGGAGTCCTTATTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLPEDTS*ESLFGN
Trigger: ATTTCCAAATAAGGACTCTCAGCTTGTATCCTCTGG...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCCAGAGGATACAAGCTaGGAGTCCTTATTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSPEDTS*ESLFGN
Trigger: ATTTCCAAATAAGGACTCTCAGCTTGTATCCTCTGG...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATCTCCCTGGGACTTCTTaGTCTCCCTGTAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYLPGTS*SPCSRL
Trigger: AAGACGACTACAGGGAGATCAAGAAGTCCCAGGGAG...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCGGAGGTGGCCAGTCTTaGAGAGCTGTCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGGGGQS*RAVFLS
Trigger: GGAGAGAAAGACAGCTCTTCAAGACTGGCCACCTCC...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTGGAGGTGGCCAGTCTTaGAGAGCTGTCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIGGGQS*RAVFLS
Trigger: GGAGAGAAAGACAGCTCTTCAAGACTGGCCACCTCC...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTGCAGATCCAGGTCGTTaGAGAATTCTCGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLADPGR*RILGFP
Trigger: AGGAAAACCGAGAATTCTTCAACGACCTGGATCTGC...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCACTAGTCAGAAACCTCTaGTCACTTTGTCTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRALVRNL*SLCLAW
Trigger: CCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAG...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTCTAGTCAGAAACCTCTaGTCACTTTGTCTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLLVRNL*SLCLAW
Trigger: CCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAG...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAACTAGTCAGAAACCTCTaGTCACTTTGTCTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKLVRNL*SLCLAW
Trigger: CCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAG...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAGATTCAGGCTCCTACTaGAGGGACAATCTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKDSGSY*RDNLGN
Trigger: ATTACCTAGATTGTCCCTTCAGTAGGAGCCTGAATC...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTCTGAGGTCAGGAGTTTaGGACGAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLILRSGV*DEPGQH
Trigger: ATGTTGGCCAGGCTCGTCTCAAACTCCTGACCTCAG...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCACAGTTGAACTTGTGTTaGACTTTGGAGGCAAATGTA +
Preference number: 4 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSQLNLC*TLEANV
Trigger: TACATTTGCCTCCAAAGTTCAACACAAGTTCAACTG...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGGCAGATTACTGGGTCTaGAGAGTGTCTACATTGTTA +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQADYWV*RVSTLL
Trigger: TAACAATGTAGACACTCTTCAGACCCAGTAATCTGC...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCATCTCAAGCTTCCTGTTaGGCCTTCACTGGGACACTG +
Preference number: 4 (lower is better)
Translates to: MRISFSAESLIALHSMCSSQASC*AFTGTL
Trigger: CAGTGTCCCAGTGAAGGCTCAACAGGAAGCTTGAGA...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGTCTCAAGCTTCCTGTTaGGCCTTCACTGGGACACTG +
Preference number: 4 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMSQASC*AFTGTL
Trigger: CAGTGTCCCAGTGAAGGCTCAACAGGAAGCTTGAGA...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCAAATATTGCAAACATaGTTCCACCATGTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPQILQT*FHHVGF
Trigger: GAAACCAACATGGTGGAATCATGTTTGCAATATTTG...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCAAGCTCAGTGGTTGGTaGAGCAAAGCCAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: PKPWADVISLRTEFIIFLKLSGW*SKAKFL
Trigger: CAGGAACTTGGCTTTGCTTCACCAACCACTGAGCTT...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGCTGAGAATGGGAAAATaGGGACATAAACTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQLRMGK*GHKLWF
Trigger: GAACCAGAGTTTATGTCCTCATTTTCCCATTCTCAG...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCCAAAACCCAAGTCCCTaGTTCAGCTTTTCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCQNPSP*FSFSGY
Trigger: GTAGCCTGAAAAGCTGAATCAGGGACTTGGGTTTTG...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGTACGCGGTCGGTTTCTaGTGGACCAGGCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQYAVGF*WTRLGF
Trigger: AAAACCCAGCCTGGTCCAGCAGAAACCGACCGCGTA...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAATGGACTCTCTGGCTCTaGATCACCTTTCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKWTLWL*ITFLWI
Trigger: AATCCAAAGAAAGGTGATGCAGAGCCAGAGAGTCCA...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTTGATGTATTCGATGTaGCATTGTCTGGACTCTCTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLLMYSM*HCLDSL
Trigger: CAGAGAGTCCAGACAATGGCACATCGAATACATCAA...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTGGCAAAGCCTTTTCTaGAGGTGTGTCCGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYWQSLF*RCVRGV
Trigger: CACACCTCGGACACACCTGCAGAAAAGGCTTTGCCA...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTTCGTTGTCACACTTaGGTTTCCTCTTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSLRCHT*VSSWIL
Trigger: CAAAATCCAAGAGGAAACGCAAGTGTGACAACGAAG...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCAGATAAACGACAATGCTaGTTCAGCATAGTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSDKRQC*FSIVQS
Trigger: GCTTTGAACTATGCTGAAGCAGCATTGTCGTTTATC...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTACTCGATAAACGACAATaGTGCTTCAGCATAGTTCAA +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVLDKRQ*CFSIVQ
Trigger: TTGAACTATGCTGAAGCAGCATTGTCGTTTATCGAG...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAAGATTGGCTGACAAATaGCATGTGGCTCTACAGCCA +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKRLADK*HVALQP
Trigger: TGGCTGTAGAGCCACATGGCATTTGTCAGCCAATCT...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGGAACTGTGATCTTCTaGATTGCAAGCAGCCTGCTA +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIGTVIF*IASSLL
Trigger: TAGCAGGCTGCTTGCAATGCAGAAGATCACAGTTCC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAGGAACTGTGATCTTCTaGATTGCAAGCAGCCTGCTA +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAGTVIF*IASSLL
Trigger: TAGCAGGCTGCTTGCAATGCAGAAGATCACAGTTCC...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATAGTCTAAGTATTTTGTaGCGTCATCACCTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYSLSIL*RHHLEK
Trigger: TTTTTCAAGGTGATGACGGCACAAAATACTTAGACT...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAACTTAATATTTCCAAATaGTTGAAGGCCAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKLNISK*LKAKAK
Trigger: TTTGGCTTTGGCCTTCAAGCATTTGGAAATATTAAG...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCATGGGATTGTGAACTCTaGCAAAAATTAGTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSWDCEL*QKLVKG
Trigger: CCCTTTCACTAATTTTTGGCAGAGTTCACAATCCCA...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCTGGGATTGTGAACTCTaGCAAAAATTAGTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIWDCEL*QKLVKG
Trigger: CCCTTTCACTAATTTTTGGCAGAGTTCACAATCCCA...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAGTGCTGATAAAACACTaGTGGCCCACCTGTCAAATG +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAVLIKH*WPTCQM
Trigger: CATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCAC...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCATAATATCCTGTACATaGATTAAGGCTGGTGACTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIIISCT*IKAGDC
Trigger: GCAGTCACCAGCCTTAATGCATGTACAGGATATTAT...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAAGACACTCCTGCATCTaGTGGCTGATGACTGAAATT +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKRHSCI*WLMTEI
Trigger: AATTTCAGTCATCAGCCAGCAGATGCAGGAGTGTCT...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409579.5
CDS-3UTR GCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAAGGACTCAACTGAACTaGCCATCTGCAAACAAACCC +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRARTQLN*PSANKP
Trigger: GGGTTTGTTTGCAGATGGGCAGTTCAGTTGAGTCCT...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCGGACAAACTGGCCTCTaGGTGTCGACTTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCGQTGL*VSTSNL
Trigger: CAAGTTTGAAGTCGACACCCAGAGGCCAGTTTGTCC...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGCATTGCACACTTGTTTaGCCCGAGGCTGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQHCTLV*PEAAVC
Trigger: GCAGACAGCAGCCTCGGGCCAAACAAGTGTGCAATG...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAATTGAATAGCAGAAAGTaGTGGAAGCCAGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKLNSRK*WKPGHL
Trigger: GAGATGACCTGGCTTCCACCACTTTCTGCTATTCAA...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGAAATGGAAATTTGGTTaGTTCCACTTTGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQKWKFG*FHFARC
Trigger: GCACCTGGCAAAGTGGAACCAACCAAATTTCCATTT...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTATTGGAAATGGAAATTTaGTTGGTTCCACTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVLEMEI*LVPLCQ
Trigger: CTGGCAAAGTGGAACCAACCAAATTTCCATTTCCAA...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATGCATCACCTTTCTTTaGATTATTGTGTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGCITFL*IIVSRG
Trigger: TCCTCTGGACACAATAATCCAAAGAAAGGTGATGCA...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATATTACTGGTGGAGGTaGCCAGTCTTGAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKYYWWR*PVLKSC
Trigger: ACAGCTCTTCAAGACTGGCCACCTCCACCAGTAATA...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTTATTACTGGTGGAGGTaGCCAGTCTTGAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIYYWWR*PVLKSC
Trigger: ACAGCTCTTCAAGACTGGCCACCTCCACCAGTAATA...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCCAGACAAAGTATTACTaGTGGAGGTGGCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCQTKYY*WRWPVL
Trigger: CAAGACTGGCCACCTCCACCAGTAATACTTTGTCTG...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCGCATTGGGGCCTGAGTaGGTTTTTAGTCTCATAGCA +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCALGPE*VFSLIA
Trigger: TGCTATGAGACTAAAAACCCACTCAGGCCCCAATGC...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTACGTTGAGCCATCTGTaGAGACCAGAGCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLITLSHL*RPEPTL
Trigger: CAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGT...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAGGTTTAGCACTGGAATaGAATAGAAAGTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGGLALE*NRKCVS
Trigger: AGACACACACTTTCTATTCCATTCCAGTGCTAAACC...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTAAGAAGAAATGCATGTaGCTGGTGGGCTTGTTATCA +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIKKKCM*LVGLLS
Trigger: TGATAACAAGCCCACCAGCCACATGCATTTCTTCTT...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATCTGACAAATGCCATGTaGCTCTACAGCCACCGAGTC +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYLTNAM*LYSHRV
Trigger: GACTCGGTGGCTGTAGAGCCACATGGCATTTGTCAG...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTGAATCAGCATTATCATaGCAAATAGCTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIESALS*QIALSL
Trigger: CAGGCTGAGAGCTATTTGCCATGATAATGCTGATTC...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTGTTTCTGACATAGGATaGGATTGTGAACTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIVSDIG*DCELCQ
Trigger: TTGGCAGAGTTCACAATCCCATCCTATGTCAGAAAC...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACTGATAAAACACTGCTaGCCCACCTGTCAAATGGGG +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSLIKHC*PTCQMG
Trigger: CCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAG...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCGCAACAATTGGAGGATaGTTACTAACCAAAATCACC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIATIGG*LLTKIT
Trigger: GGTGATTTTGGTTAGTAACCATCCTCCAATTGTTGC...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAACTTGTGTTGAACTTTaGAGGCAAATGTACGTCTTC +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGTCVEL*RQMYVF
Trigger: GAAGACGTACATTTGCCTCCAAAGTTCAACACAAGT...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTGGTCATGGAAGGATATaGTCAGTTGAACTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIGHGRI*SVELVL
Trigger: CAACACAAGTTCAACTGACCATATCCTTCCATGACC...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAGATCAGGAATATACCTaGACTACTCTCTTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVDQEYT*TTLFQR
Trigger: CCTTTGAAAGAGAGTAGTCCAGGTATATTCCTGATC...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATTCCCGATGTAAACAATaGCTGATCGTAAGGTCTAAA +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHSRCKQ*LIVRSK
Trigger: TTTAGACCTTACGATCAGCCATTGTTTACATCGGGA...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGCTGTTGAGCCTTCACTaGGACACTGGGAGCGTGCAT +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQLLSLH*DTGSVH
Trigger: ATGCACGCTCCCAGTGTCCCAGTGAAGGCTCAACAG...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGTTCCAAATGGTTaGAAGTGCAGTTTATGTGGT +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSLVPNG*KCSLCG
Trigger: ACCACATAAACTGCACTTCCAACCATTTGGAACCAG...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGCTGGTTCCAAATGGTTaGAAGTGCAGTTTATGTGGT +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQLVPNG*KCSLCG
Trigger: ACCACATAAACTGCACTTCCAACCATTTGGAACCAG...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAAACTCTGGTTCCAAATaGTTGGAAGTGCAGTTTATG +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGNSGSK*LEVQFM
Trigger: CATAAACTGCACTTCCAACCATTTGGAACCAGAGTT...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR CAA 72 bp TACTCAACCAAATATTGCAAACATGATTCCACCATGTaGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACAC +
Preference number: 4 (lower is better)
Translates to: YSTKYCKHDSTM*VSVVCSSLTAH
Trigger: GTGTGCAGTCAGGGAACTGCACACAACTGAAACCAACATGGTGGAATCATGTTTGCAATATTTGGTTGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR CAA 72 bp CATATTCCTCCTGAGGGATGCAAGATCTCACCTTATTaGGAAATGGAAATTTGGTTGGTTCCACTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: HIPPEGCKISPY*EMEIWLVPLCQ
Trigger: CTGGCAAAGTGGAACCAACCAAATTTCCATTTCCAAATAAGGTGAGATCTTGCATCCCTCAGGAGGAATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAACGACTCTGTCTCAATaGACTCCTTGGATTTGGGGA +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSTTLSQ*TPWIWG
Trigger: TCCCCAAATCCAAGGAGTTCATTGAGACAGAGTCGT...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR TCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCCTCCCTGGGACTTCTTaGTCTCCCTGTAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGLPGTS*SPCSRL
Trigger: AAGACGACTACAGGGAGATCAAGAAGTCCCAGGGAG...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTGTATTGCCACACTGTTaGTGTTCATGTTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLVLPHC*CSCCSG
Trigger: ACCACTGCAACATGAACATCAACAGTGTGGCAATAC...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTTTTGCTGGAAGAGGCTaGAGTAAACAAACTGTTGCC +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLFAGRG*SKQTVA
Trigger: GGCAACAGTTTGTTTACTTCAGCCTCTTCCAGCAAA...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATTTGCTGGAAGAGGCTaGAGTAAACAAACTGTTGCC +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKFAGRG*SKQTVA
Trigger: GGCAACAGTTTGTTTACTTCAGCCTCTTCCAGCAAA...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGGAGCTCTACTGTTTCTaGATACATCGTATAAGGAGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLELYCF*IHRIRR
Trigger: TCTCCTTATACGATGTATTCAGAAACAGTAGAGCTC...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTGAGCTCTACTGTTTCTaGATACATCGTATAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIELYCF*IHRIRR
Trigger: TCTCCTTATACGATGTATTCAGAAACAGTAGAGCTC...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACTTGGGCGGCTTTAGATaGGTTCTTGAAATAGTCGAT +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDLGGFR*VLEIVD
Trigger: ATCGACTATTTCAAGAACTCATCTAAAGCCGCCCAA...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGCAGATCCAGGTCGTTaGAGAATTCTCGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSADPGR*RILGFP
Trigger: AGGAAAACCGAGAATTCTTCAACGACCTGGATCTGC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGAGTGTCCAAAAACGTTaGGCCATCTGTGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMSVQKR*AICGDQ
Trigger: CTGGTCTCCACAGATGGCTCAACGTTTTTGGACACT...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCACTGCTAATCAAAGCCTaGAAAATCGCCCCCAAATCA +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRALLIKA*KIAPKS
Trigger: TGATTTGGGGGCGATTTTTCAGGCTTTGATTAGCAG...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTAAGAACTACACGCTCTaGCCACTGCCCACAACGGTA +
Preference number: 4 (lower is better)
Translates to: RISVNVYGSASSLSILCRKNYTL*PLPTTV
Trigger: TACCGTTGTGGGCAGTGGTCAGAGCGTGTAGTTCTT...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCCACGTGCTCCACAGATaGAACAAGACAGTCATAAGA +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCHVLHR*NKTVIR
Trigger: TCTTATGACTGTCTTGTTTCATCTGTGGAGCACGTG...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCATATACATCAAACTGTaGGCAGTGGTTGTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCIYIKL*AVVVSG
Trigger: GCCTGAGACAACCACTGCTCACAGTTTGATGTATAT...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCGTGATCAGCTCCGAATaGGGATTAACAAACTCAATT +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSVISSE*GLTNSI
Trigger: AATTGAGTTTGTTAATCCTCATTCGGAGCTGATCAC...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409579.5
CDS-3UTR TCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGACCAGAACAACTGACTTaGACGTATTTTGATTCTCAA +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGPEQLT*TYFDSQ
Trigger: TTGAGAATCAAAATACGTTCAAGTCAGTTGTTCTGG...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCTGTGACACTAAAGAATaGCAAGCAAAGCGGCATCCC +
Preference number: 4 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCCDTKE*QAKRHP
Trigger: GGGATGCCGCTTTGCTTGTCATTCTTTAGTGTCACA...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATTCCACTTTGCCAGGTaGTTGAATAGCAGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKFHFAR*LNSRKW
Trigger: CCACTTTCTGCTATTCAAGCACCTGGCAAAGTGGAA...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTTGGCAAAGCCTTTTCTaGAGGTGTGTCCGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: RISVNVYGSASSLSILCRWQSLF*RCVRGV
Trigger: CACACCTCGGACACACCTGCAGAAAAGGCTTTGCCA...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTTCGTTGTCACACTTaGGTTTCCTCTTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKLRCHT*VSSWIL
Trigger: CAAAATCCAAGAGGAAACGCAAGTGTGACAACGAAG...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACCTTCGTTGTCACACTTaGGTTTCCTCTTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDLRCHT*VSSWIL
Trigger: CAAAATCCAAGAGGAAACGCAAGTGTGACAACGAAG...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTCATGTTGCAGTGGTTTaGAGACAAAGTATTACTGGT +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVHVAVV*RQSITG
Trigger: ACCAGTAATACTTTGTCTGCAAACCACTGCAACATG...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTCGAAGACAAGTTTCTaGCTCTTGCAGTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYSKTSF*LLQSLW
Trigger: CCACAGGGACTGCAAGAGGCAGAAACTTGTCTTCGA...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTATTGCATCTGCTTTATaGTTCATTCGTTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTIASAL*FIRLAS
Trigger: AGAAGCTAAACGAATGAAGCATAAAGCAGATGCAAT...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACAAACTTTTCCACCATTaGATCTGCTTTATGCTTCAT +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNKLFHH*ICFMLH
Trigger: ATGAAGCATAAAGCAGATGCAATGGTGGAAAAGTTT...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCGATAAACGACAATGCTaGTTCAGCATAGTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSDKRQC*FSIVQS
Trigger: GCTTTGAACTATGCTGAAGCAGCATTGTCGTTTATC...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAGGGGCCTTGTTCCATTaGATTTCCACACTCGATAAA +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAGALFH*ISTLDK
Trigger: TTTATCGAGTGTGGAAATGCAATGGAACAAGGCCCC...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTGGGGCCTTGTTCCATTaGATTTCCACACTCGATAAA +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLGALFH*ISTLDK
Trigger: TTTATCGAGTGTGGAAATGCAATGGAACAAGGCCCC...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGACAAACACACATGCCCTaGAAAAGATCATTGTTCAAT +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGQTHMP*KRSLFN
Trigger: ATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTG...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAACATACAAACACACATaGCCTGCAAAAGATCATTGT +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVTYKHT*PAKDHC
Trigger: ACAATGATCTTTTGCAGGGCATGTGTGTTTGTATGT...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGAACGCATCAAAGGGCTaGAGGTGCACATTCTGCATG +
Preference number: 4 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMNASKG*RCTFCM
Trigger: CATGCAGAATGTGCACCTGCAGCCCTTTGATGCGTT...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTAAGTCTAAGTATTTTGTaGCGTCATCACCTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLSLSIL*RHHLEK
Trigger: TTTTTCAAGGTGATGACGGCACAAAATACTTAGACT...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCAAGGCCAAAGCCAAATaGAAATTCCACAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCKAKAK*KFHKPF
Trigger: GAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTT...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTACTTAATATTTCCAAATaGTTGAAGGCCAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLLNISK*LKAKAK
Trigger: TTTGGCTTTGGCCTTCAAGCATTTGGAAATATTAAG...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTTGCAGAAAGTCTCATTaGATTGCATTCCATGTGTTC +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIICRKSH*IAFHVF
Trigger: GAACACATGGAATGCAATGCAATGAGACTTTCTGCA...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGTGCAGAAAGTCTCATTaGATTGCATTCCATGTGTTC +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQCRKSH*IAFHVF
Trigger: GAACACATGGAATGCAATGCAATGAGACTTTCTGCA...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAACTGAACTGCCCATCTaGAAACAAACCCTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKTELPI*KQTLSA
Trigger: TGCAGAAAGGGTTTGTTTGCAGATGGGCAGTTCAGT...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTGACGAGGGCTGGTTCTaGGCTCTTGAATCTGCAACA +
Preference number: 4 (lower is better)
Translates to: RISVNVYGSASSLSILCRDEGWF*ALESAT
Trigger: TGTTGCAGATTCAAGAGCCCAGAACCAGCCCTCGTC...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGTTGGAAATGGAAATTTaGTTGGTTCCACTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQLEMEI*LVPLCQ
Trigger: CTGGCAAAGTGGAACCAACCAAATTTCCATTTCCAA...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATGTCCTTATTTGGAAATaGAAATTTGGTTGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHVLIWK*KFGWFH
Trigger: GTGGAACCAACCAAATTTCCATTTCCAAATAAGGAC...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCTGCATCACCTTTCTTTaGATTATTGTGTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSCITFL*IIVSRG
Trigger: TCCTCTGGACACAATAATCCAAAGAAAGGTGATGCA...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTAGAATAGGAGGCTTGTaGGGATTAACTTTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIRIGGL*GLTLFS
Trigger: GCTAAACAAAGTTAATCCCCACAAGCCTCCTATTCT...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTTTGCTCTCTGACCCGTaGCTTTCATTTTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLILLSDP*LSFWIR
Trigger: TCTGATCCAAAATGAAAGCCACGGGTCAGAGAGCAA...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGCTTGTTGGCTGTCCTTaGCCTTTGCTCCTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQLVGCP*PLLLLA
Trigger: TGCAAGGAGGAGCAAAGGCCAAGGACAGCCAACAAG...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAACAAAGTATTACTGGTaGAGGTGGCCAGTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKTKYYW*RWPVLK
Trigger: CTTCAAGACTGGCCACCTCCACCAGTAATACTTTGT...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTATGTTCATGTTGCAGTaGTTTGCAGACAAAGTATTA +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPMFMLQ*FADKVL
Trigger: TAATACTTTGTCTGCAAACCACTGCAACATGAACAT...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGCATTGGGGCCTGAGTaGGTTTTTAGTCTCATAGCA +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSALGPE*VFSLIA
Trigger: TGCTATGAGACTAAAAACCCACTCAGGCCCCAATGC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGGTTTAGCACTGGAATaGAATAGAAAGTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVGLALE*NRKCVS
Trigger: AGACACACACTTTCTATTCCATTCCAGTGCTAAACC...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCCATTTGCATACTACTTaGAGGTGGGGCTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGHLHTT*RWGWEG
Trigger: CCCTTCCCAGCCCCACCTCCAAGTAGTATGCAAATG...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAAGAAATGCATGTGGCTaGTGGGCTTGTTATCACAGG +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSRNACG*WACYHR
Trigger: CCTGTGATAACAAGCCCACCAGCCACATGCATTTCT...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTATTTGTTTTTAACGTGTaGCAAGATAGACCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLFVFNV*QDRPSF
Trigger: AAAAGAGGGTCTATCTTGCCACACGTTAAAAACAAA...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACTTTGTTTTTAACGTGTaGCAAGATAGACCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNFVFNV*QDRPSF
Trigger: AAAAGAGGGTCTATCTTGCCACACGTTAAAAACAAA...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGTTTCTGACATAGGATaGGATTGTGAACTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDVSDIG*DCELCQ
Trigger: TTGGCAGAGTTCACAATCCCATCCTATGTCAGAAAC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCACTGATAAAACACTGCTaGCCCACCTGTCAAATGGGG +
Preference number: 4 (lower is better)
Translates to: MRISFSAESLIALHSMCSLIKHC*PTCQMG
Trigger: CCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAG...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTTTTTCCTGGGAAATGTaGGCCATCAGAGTGCTGATA +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLFSWEM*AIRVLI
Trigger: TATCAGCACTCTGATGGCCCACATTTCCCAGGAAAA...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAATTCAAGAAGTTTTCCTaGGAAATGTGGGCCATCAGA +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKFKKFS*EMWAIR
Trigger: TCTGATGGCCCACATTTCCCAGGAAAACTTCTTGAA...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTATTCACAAGCAACAATTaGAGGATGGTTACTAACCAA +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVFTSNN*RMVTNQ
Trigger: TTGGTTAGTAACCATCCTCCAATTGTTGCTTGTGAA...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGACTTGTGTTGAACTTTaGAGGCAAATGTACGTCTTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLTCVEL*RQMYVF
Trigger: GAAGACGTACATTTGCCTCCAAAGTTCAACACAAGT...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGGATCAGGAATATACCTaGACTACTCTCTTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLDQEYT*TTLFQR
Trigger: CCTTTGAAAGAGAGTAGTCCAGGTATATTCCTGATC...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CAA 72 bp ATACATCGTATAAGGAGATTTGGATTCCATGGGGCCTaGTTCCATTGCATTTCCACACTCGATAAACGACAA +
Preference number: 4 (lower is better)
Translates to: IHRIRRFGFHGA*FHCISTLDKRQ
Trigger: TTGTCGTTTATCGAGTGTGGAAATGCAATGGAACAAGGCCCCATGGAATCCAAATCTCCTTATACGATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
CDS-3UTR TCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCTTGGGCGGCTTTAGATaGGTTCTTGAAATAGTCGAT +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCLGGFR*VLEIVD
Trigger: ATCGACTATTTCAAGAACTCATCTAAAGCCGCCCAA...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCATTGGGCGGCTTTAGATaGGTTCTTGAAATAGTCGAT +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRALGGFR*VLEIVD
Trigger: ATCGACTATTTCAAGAACTCATCTAAAGCCGCCCAA...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTAGTGTCCAAAAACGTTaGGCCATCTGTGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: RISVNVYGSASSLSILCRSVQKR*AICGDQ
Trigger: CTGGTCTCCACAGATGGCTCAACGTTTTTGGACACT...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCCTGCTAATCAAAGCCTaGAAAATCGCCCCCAAATCA +
Preference number: 4 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCLLIKA*KIAPKS
Trigger: TGATTTGGGGGCGATTTTTCAGGCTTTGATTAGCAG...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACACGTGCTCCACAGATaGAACAAGACAGTCATAAGA +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSHVLHR*NKTVIR
Trigger: TCTTATGACTGTCTTGTTTCATCTGTGGAGCACGTG...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCATATACATCAAACTGTaGGCAGTGGTTGTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCIYIKL*AVVVSG
Trigger: GCCTGAGACAACCACTGCTCACAGTTTGATGTATAT...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCGATGCGAACACGCAGTaGCTCATACTCAATATTAGG +
Preference number: 4 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCDANTQ*LILNIR
Trigger: CCTAATATTGAGTATGAGTCACTGCGTGTTCGCATC...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCAAATATTGCAAACATaGTTCCACCATGTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSQILQT*FHHVGF
Trigger: GAAACCAACATGGTGGAATCATGTTTGCAATATTTG...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCAGCACAAACCACCTCTaGAAGAGTATCAAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: PKPWADVISLRTEFIIFLSTNHL*KSIKLS
Trigger: ACTGAGCTTGATACTCTTTCAGAGGTGGTTTGTGCT...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACTTTCAAGATTCCACTTaGTCCGGGTTTCTTCGAAAA +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDFQDST*SGFLRK
Trigger: TTTTCGAAGAAACCCGGATCAAGTGGAATCTTGAAA...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAAAAACTGTGCTCTTCTaGGAATGGGAAAATGAGGAC +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKKTVLF*EWENED
Trigger: GTCCTCATTTTCCCATTCTCAGAAGAGCACAGTTTT...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTTCGAAGACAAGTTTCTaGCTCTTGCAGTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: RISVNVYGSASSLSILCRSKTSF*LLQSLW
Trigger: CCACAGGGACTGCAAGAGGCAGAAACTTGTCTTCGA...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCAAACTTTTCCACCATTaGATCTGCTTTATGCTTCAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIKLFHH*ICFMLH
Trigger: ATGAAGCATAAAGCAGATGCAATGGTGGAAAAGTTT...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAAACTTTTCCACCATTaGATCTGCTTTATGCTTCAT +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVKLFHH*ICFMLH
Trigger: ATGAAGCATAAAGCAGATGCAATGGTGGAAAAGTTT...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGATAAACGACAATGCTaGTTCAGCATAGTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDDKRQC*FSIVQS
Trigger: GCTTTGAACTATGCTGAAGCAGCATTGTCGTTTATC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGCAAACACACATGCCCTaGAAAAGATCATTGTTCAAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLQTHMP*KRSLFN
Trigger: ATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTG...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCACATACAAACACACATaGCCTGCAAAAGATCATTGT +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSTYKHT*PAKDHC
Trigger: ACAATGATCTTTTGCAGGGCATGTGTGTTTGTATGT...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTTCAAAGGGCTGCAGGTaGACATTCTGCATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLISKGCR*TFCMRS
Trigger: ACTCCTCATGCAGAATGTGCACCTGCAGCCCTTTGA...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTTGTGATCTTCTGCATTaGAAGCAGCCTGCTAATCAA +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLICDLLH*KQPANQ
Trigger: TTGATTAGCAGGCTGCTTGCAATGCAGAAGATCACA...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAAGTCTAAGTATTTTGTaGCGTCATCACCTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGSLSIL*RHHLEK
Trigger: TTTTTCAAGGTGATGACGGCACAAAATACTTAGACT...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCTGTTACAACAAAGTCTaGAACTTTCAAGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCCYNKV*NFQGGQ
Trigger: CTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACA...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGAAACCCCACAGAAACTaGTGTACCAACGTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQKPHRN*CTNVLH
Trigger: GTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACATAATATCCTGTACATaGATTAAGGCTGGTGACTGC +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDIISCT*IKAGDC
Trigger: GCAGTCACCAGCCTTAATGCATGTACAGGATATTAT...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTTCTTCTGCACCCCTCTaGCTGGTTAATGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: RISVNVYGSASSLSILCRSSAPL*LVNEDS
Trigger: TGAGTCCTCATTAACCAGGCAGAGGGGTGCAGAAGA...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAAAATTTACCCCCTGCTaGCTCGGAGTGCCAATTAAA +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSKFTPC*LGVPIK
Trigger: TTTAATTGGCACTCCGAGGCAGCAGGGGGTAAATTT...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATATTTATGTCCTTGTCGAGGATGAATCCTaGACCTGTGAAATTATATTT +
Preference number: 4 (lower is better)
Translates to: VVFGLFSKEYTALDIYVLVEDES*TCEIIF
Trigger: AAATATAATTTCACAGGTGCAGGATTCATCCTCGAC...AAGGACATAAATATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTCAGATAGACGAGGGCTaGTTCTGGGCTCTTGAATCT +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIQIDEG*FWALES
Trigger: AGATTCAAGAGCCCAGAACCAGCCCTCGTCTATCTG...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTATGTGCAGTGCACGCTaGTTTCCGAAGACGACTTCA +
Preference number: 4 (lower is better)
Translates to: RISVNVYGSASSLSILCRMCSAR*FPKTTS
Trigger: TGAAGTCGTCTTCGGAAACCAGCGTGCACTGCACAT...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTAAATGGAAATTTGGTTaGTTCCACTTTGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIKWKFG*FHFARC
Trigger: GCACCTGGCAAAGTGGAACCAACCAAATTTCCATTT...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCTTTCCTCTTGGATTTTaGCAAAGCCTTTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCFPLGF*QSLFCR
Trigger: CCTGCAGAAAAGGCTTTGCCAAAATCCAAGAGGAAA...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATTTCCTCTTGGATTTTaGCAAAGCCTTTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKFPLGF*QSLFCR
Trigger: CCTGCAGAAAAGGCTTTGCCAAAATCCAAGAGGAAA...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTATTACTGGTGGAGGTaGCCAGTCTTGAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYYYWWR*PVLKSC
Trigger: ACAGCTCTTCAAGACTGGCCACCTCCACCAGTAATA...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCTGCGGCCGTGACTTGTaGAGGGGAATGTTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGCGRDL*RGMFSE
Trigger: TTCTGAAAACATTCCCCTCCACAAGTCACGGCCGCA...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAGAATACTTTACAGCGTaGTCCCTTTTGAGTCGAAAC +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKEYFTA*SLLSRN
Trigger: GTTTCGACTCAAAAGGGACCACGCTGTAAAGTATTC...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTGAATCAGCATTATCATaGCAAATAGCTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLESALS*QIALSL
Trigger: CAGGCTGAGAGCTATTTGCCATGATAATGCTGATTC...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTTGTTTTTAACGTGTaGCAAGATAGACCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGFVFNV*QDRPSF
Trigger: AAAAGAGGGTCTATCTTGCCACACGTTAAAAACAAA...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAAAGAAGCACCCCAGTTaGAGACATGTAAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKKKHPS*RHVKWK
Trigger: TTTCCATTTTACATGTCTCCAACTGGGGTGCTTCTT...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATTCAAGAAGTTTTCCTaGGAAATGTGGGCCATCAGA +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKFKKFS*EMWAIR
Trigger: TCTGATGGCCCACATTTCCCAGGAAAACTTCTTGAA...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGTTTGCTGGAAGAGGCTaGAGTAAACAAACTGTTGCC +
Preference number: 4 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMFAGRG*SKQTVA
Trigger: GGCAACAGTTTGTTTACTTCAGCCTCTTCCAGCAAA...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGGCAGATCCAGGTCGTTaGAGAATTCTCGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQADPGR*RILGFP
Trigger: AGGAAAACCGAGAATTCTTCAACGACCTGGATCTGC...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCACTGCTAATCAAAGCCTaGAAAATCGCCCCCAAATCA +
Preference number: 4 (lower is better)
Translates to: MRISFSAESLIALHSMCSLLIKA*KIAPKS
Trigger: TGATTTGGGGGCGATTTTTCAGGCTTTGATTAGCAG...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTGTGCCGTCATCACCTTaGAAAAATGGATTGCACCAC +
Preference number: 4 (lower is better)
Translates to: RISVNVYGSASSLSILCRVPSSP*KNGLHH
Trigger: GTGGTGCAATCCATTTTTTCAAGGTGATGACGGCAC...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTCAGTTGAACTTGTGTTaGACTTTGGAGGCAAATGTA +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIQLNLC*TLEANV
Trigger: TACATTTGCCTCCAAAGTTCAACACAAGTTCAACTG...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCATGGGCTGGATCAGGTaGAGGGATGGTTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGMGWIR*RDGFAF
Trigger: AAAAGCAAAACCATCCCTTCACCTGATCCAGCCCAT...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTTTTCAAGATTCCACTTaGTCCGGGTTTCTTCGAAAA +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIFQDST*SGFLRK
Trigger: TTTTCGAAGAAACCCGGATCAAGTGGAATCTTGAAA...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCATTCCACTTTGCCAGGTaGTTGAATAGCAGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: MRISFSAESLIALHSMCSFHFAR*LNSRKW
Trigger: CCACTTTCTGCTATTCAAGCACCTGGCAAAGTGGAA...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGTGGACTCTCTGGCTCTaGATCACCTTTCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMWTLWL*ITFLWI
Trigger: AATCCAAAGAAAGGTGATGCAGAGCCAGAGAGTCCA...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTCATGTTGCAGTGGTTTaGAGACAAAGTATTACTGGT +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIHVAVV*RQSITG
Trigger: ACCAGTAATACTTTGTCTGCAAACCACTGCAACATG...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGATTGCATCTGCTTTATaGTTCATTCGTTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLIASAL*FIRLAS
Trigger: AGAAGCTAAACGAATGAAGCATAAAGCAGATGCAAT...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCATTGCATCTGCTTTATaGTTCATTCGTTTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSIASAL*FIRLAS
Trigger: AGAAGCTAAACGAATGAAGCATAAAGCAGATGCAAT...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGAAACTTTTCCACCATTaGATCTGCTTTATGCTTCAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLKLFHH*ICFMLH
Trigger: ATGAAGCATAAAGCAGATGCAATGGTGGAAAAGTTT...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCCTCGATAAACGACAATaGTGCTTCAGCATAGTTCAA +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCLDKRQ*CFSIVQ
Trigger: TTGAACTATGCTGAAGCAGCATTGTCGTTTATCGAG...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAGGGTATTTGGTAACATaGAATCTAGTAAACTTCCGG +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKGYLVT*NLVNFR
Trigger: CCGGAAGTTTACTAGATTGCATGTTACCAAATACCC...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGCTTGTTATCACAGGTaGAGAAAACTTCAACTCCTA +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIACYHR*RKLQLL
Trigger: TAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTTGCAGGTGCACATTCTaGATGAGGAGTGAGAGAATC +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLICRCTF*MRSERI
Trigger: GATTCTCTCACTCCTCATGCAGAATGTGCACCTGCA...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGTTGGTTTCAGTTGTGTaGAGTTCCCTGACTGCACAC +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQLVSVV*SSLTAH
Trigger: GTGTGCAGTCAGGGAACTGCACACAACTGAAACCAA...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAACTGAACTGCCCATCTaGAAACAAACCCTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: MRISFSAESLIALHSMCSTELPI*KQTLSA
Trigger: TGCAGAAAGGGTTTGTTTGCAGATGGGCAGTTCAGT...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAAAATGGAAATTTGGTTaGTTCCACTTTGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSKWKFG*FHFARC
Trigger: GCACCTGGCAAAGTGGAACCAACCAAATTTCCATTT...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCTTGGAAATGGAAATTTaGTTGGTTCCACTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCLEMEI*LVPLCQ
Trigger: CTGGCAAAGTGGAACCAACCAAATTTCCATTTCCAA...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGACAAAGTATTACTGGTaGAGGTGGCCAGTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMTKYYW*RWPVLK
Trigger: CTTCAAGACTGGCCACCTCCACCAGTAATACTTTGT...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTCAGACAAAGTATTACTaGTGGAGGTGGCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: RISVNVYGSASSLSILCRQTKYY*WRWPVL
Trigger: CAAGACTGGCCACCTCCACCAGTAATACTTTGTCTG...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGAATACTTTACAGCGTaGTCCCTTTTGAGTCGAAAC +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSEYFTA*SLLSRN
Trigger: GTTTCGACTCAAAAGGGACCACGCTGTAAAGTATTC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCTCTAGCCTGGGATTATaGAAACTAGACAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCSSLGL*KLDKEG
Trigger: ACCTTCTTTGTCTAGTTTCCATAATCCCAGGCTAGA...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCGGTTTAGCACTGGAATaGAATAGAAAGTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCGLALE*NRKCVS
Trigger: AGACACACACTTTCTATTCCATTCCAGTGCTAAACC...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAAGACTTGAAACAGATTaGCTGACAAATGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSRLETD*LTNAMW
Trigger: CCACATGGCATTTGTCAGCCAATCTGTTTCAAGTCT...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTAAGAAGCACCCCAGTTaGAGACATGTAAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLKKHPS*RHVKWK
Trigger: TTTCCATTTTACATGTCTCCAACTGGGGTGCTTCTT...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAGCAACAATTGGAGGATaGTTACTAACCAAAATCACC +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKATIGG*LLTKIT
Trigger: GGTGATTTTGGTTAGTAACCATCCTCCAATTGTTGC...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTTTCATGTCAAGCCACTaGTCTAATGCCTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIFMSSH*SNASVF
Trigger: GAAGACGGAGGCATTAGACCAGTGGCTTGACATGAA...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAAACTCTGGTTCCAAATaGTTGGAAGTGCAGTTTATG +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKNSGSK*LEVQFM
Trigger: CATAAACTGCACTTCCAACCATTTGGAACCAGAGTT...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCATTTTCAGAATTGTTGTaGGCTGCTTTCGTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: MRISFSAESLIALHSMCSFSELL*AAFVRS
Trigger: AGACCTCACGAAAGCAGCTCACAACAATTCTGAAAA...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGAGCTCTACTGTTTCTaGATACATCGTATAAGGAGA +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSELYCF*IHRIRR
Trigger: TCTCCTTATACGATGTATTCAGAAACAGTAGAGCTC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTTGGGCGGCTTTAGATaGGTTCTTGAAATAGTCGAT +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYLGGFR*VLEIVD
Trigger: ATCGACTATTTCAAGAACTCATCTAAAGCCGCCCAA...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGCACGTGCTCCACAGATaGAACAAGACAGTCATAAGA +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQHVLHR*NKTVIR
Trigger: TCTTATGACTGTCTTGTTTCATCTGTGGAGCACGTG...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCAAGGATATGGTCAGTTaGACTTGTGTTGAACTTTGG +
Preference number: 4 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCKDMVS*TCVELW
Trigger: CCAAAGTTCAACACAAGTTCAACTGACCATATCCTT...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTTTCCACTTTGCCAGGTaGTTGAATAGCAGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIFHFAR*LNSRKW
Trigger: CCACTTTCTGCTATTCAAGCACCTGGCAAAGTGGAA...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACATGTTGCAGTGGTTTaGAGACAAAGTATTACTGGT +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSHVAVV*RQSITG
Trigger: ACCAGTAATACTTTGTCTGCAAACCACTGCAACATG...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGATAAACGACAATGCTaGTTCAGCATAGTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSDKRQC*FSIVQS
Trigger: GCTTTGAACTATGCTGAAGCAGCATTGTCGTTTATC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCACAAACACACATGCCCTaGAAAAGATCATTGTTCAAT +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAQTHMP*KRSLFN
Trigger: ATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTG...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGTTTGGTGTGCTGTATTaGACCTGGTTAACTAACCCA +
Preference number: 4 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMFGVLY*TWLTNP
Trigger: TGGGTTAGTTAACCAGGTGCAATACAGCACACCAAA...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTAAGGCCAAAGCCAAATaGAAATTCCACAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIKAKAK*KFHKPF
Trigger: GAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTT...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGAACCAAAATCACCCATaGCAAACCCCACAGAAACTG +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQNQNHP*QTPQKL
Trigger: CAGTTTCTGTGGGGTTTGGCATGGGTGATTTTGGTT...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGAACCTAAATCCCCTTaGAGCCAACACAAAATTTAC +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSEPKSP*SQHKIY
Trigger: GTAAATTTTGTGTTGGCTGCAAGGGGATTTAGGTTC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGTTGAATAGCAGAAAGTaGTGGAAGCCAGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQLNSRK*WKPGHL
Trigger: GAGATGACCTGGCTTCCACCACTTTCTGCTATTCAA...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGAAATGGAAATTTGGTTaGTTCCACTTTGCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMKWKFG*FHFARC
Trigger: GCACCTGGCAAAGTGGAACCAACCAAATTTCCATTT...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGTTGCTCTCTGACCCGTaGCTTTCATTTTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQLLSDP*LSFWIR
Trigger: TCTGATCCAAAATGAAAGCCACGGGTCAGAGAGCAA...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGGAGATTTGGATTCCATaGGGCCTTGTTCCATTGCAT +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQEIWIP*GLVPLH
Trigger: ATGCAATGGAACAAGGCCCCATGGAATCCAAATCTC...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCATCTAGCCTGGGATTATaGAAACTAGACAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSSSLGL*KLDKEG
Trigger: ACCTTCTTTGTCTAGTTTCCATAATCCCAGGCTAGA...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAAGACTTGAAACAGATTaGCTGACAAATGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: MRISFSAESLIALHSMCSRLETD*LTNAMW
Trigger: CCACATGGCATTTGTCAGCCAATCTGTTTCAAGTCT...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTTCAAGAAGTTTTCCTaGGAAATGTGGGCCATCAGA +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYFKKFS*EMWAIR
Trigger: TCTGATGGCCCACATTTCCCAGGAAAACTTCTTGAA...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCTTCTTGAAAGACTGCTaGGTGTTTCTTAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: PKPWADVISLRTEFIIFLFLKDC*VFLSTN
Trigger: GTTTGTGCTAAGAAACACCCAGCAGTCTTTCAAGAA...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR CAA 72 bp GTGGATTTTCAAAGTAACACACAGAGATTTAATCCCTaGATTCCCATTACTGTGAGTAAGAGCTGTGAACCT +
Preference number: 4 (lower is better)
Translates to: VDFQSNTQRFNP*IPITVSKSCEP
Trigger: AGGTTCACAGCTCTTACTCACAGTAATGGGAATCAAGGGATTAAATCTCTGTGTGTTACTTTGAAAATCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCGTCATCTTCCAGCATTaGTGTATTCGATGTGCCATT +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGVIFQH*CIRCAI
Trigger: AATGGCACATCGAATACATCAATGCTGGAAGATGAC...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGGTCATCTTCCAGCATTaGTGTATTCGATGTGCCATT +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQVIFQH*CIRCAI
Trigger: AATGGCACATCGAATACATCAATGCTGGAAGATGAC...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 4 (lower is better)
Translates to: MRISFSAESLIALHSMCSKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATCAGTTGAACTTGTGTTaGACTTTGGAGGCAAATGTA +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYQLNLC*TLEANV
Trigger: TACATTTGCCTCCAAAGTTCAACACAAGTTCAACTG...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCAGAACAACTGACTTaGACGTATTTTGATTCTCAA +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSPEQLT*TYFDSQ
Trigger: TTGAGAATCAAAATACGTTCAAGTCAGTTGTTCTGG...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCCTCTCTAGACACGAGTaGGTTATGTCAGATGGTATA +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGLSRHE*VMSDGI
Trigger: TATACCATCTGACATAACTCACTCGTGTCTAGAGAG...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCATCATTTCATCATAATTaGCTAAAGTGTTCTGGATCC +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRASFHHN*LKCSGS
Trigger: GGATCCAGAACACTTTAGGCAATTATGATGAAATGA...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAGGGTATTTGGTAACATaGAATCTAGTAAACTTCCGG +
Preference number: 4 (lower is better)
Translates to: MRISFSAESLIALHSMCSGYLVT*NLVNFR
Trigger: CCGGAAGTTTACTAGATTGCATGTTACCAAATACCC...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGTGGGATTGTGAACTCTaGCAAAAATTAGTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMWDCEL*QKLVKG
Trigger: CCCTTTCACTAATTTTTGGCAGAGTTCACAATCCCA...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCTGTTACAACAAAGTCTaGAACTTTCAAGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGCYNKV*NFQGGQ
Trigger: CTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACA...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGTGCAGAAAGTCTCATTaGATTGCATTCCATGTGTTC +
Preference number: 4 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMCRKSH*IAFHVF
Trigger: GAACACATGGAATGCAATGCAATGAGACTTTCTGCA...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGTCCTTATTTGGAAATaGAAATTTGGTTGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSVLIWK*KFGWFH
Trigger: GTGGAACCAACCAAATTTCCATTTCCAAATAAGGAC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAAGAATAGGAGGCTTGTaGGGATTAACTTTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: MRISFSAESLIALHSMCSRIGGL*GLTLFS
Trigger: GCTAAACAAAGTTAATCCCCACAAGCCTCCTATTCT...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTTTTCCTCTTGGATTTTaGCAAAGCCTTTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIFPLGF*QSLFCR
Trigger: CCTGCAGAAAAGGCTTTGCCAAAATCCAAGAGGAAA...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCATGTTCATGTTGCAGTaGTTTGCAGACAAAGTATTA +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCMFMLQ*FADKVL
Trigger: TAATACTTTGTCTGCAAACCACTGCAACATGAACAT...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTGAATCAGCATTATCATaGCAAATAGCTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RISVNVYGSASSLSILCRESALS*QIALSL
Trigger: CAGGCTGAGAGCTATTTGCCATGATAATGCTGATTC...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTGTTTCTGACATAGGATaGGATTGTGAACTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: RISVNVYGSASSLSILCRVSDIG*DCELCQ
Trigger: TTGGCAGAGTTCACAATCCCATCCTATGTCAGAAAC...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCGGTCATGGAAGGATATaGTCAGTTGAACTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGGHGRI*SVELVL
Trigger: CAACACAAGTTCAACTGACCATATCCTTCCATGACC...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCCATACTGATAATCTGTaGGAGCTACATTTAAGCCAT +
Preference number: 4 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCHTDNL*ELHLSH
Trigger: ATGGCTTAAATGTAGCTCCCACAGATTATCAGTATG...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCGATCAGGTGAAGGGATaGTTTTGCTTTTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGDQVKG*FCFCCC
Trigger: ACAGCAACAAAAGCAAAACCATCCCTTCACCTGATC...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCGAGCTCTACTGTTTCTaGATACATCGTATAAGGAGA +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGELYCF*IHRIRR
Trigger: TCTCCTTATACGATGTATTCAGAAACAGTAGAGCTC...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTCTCGATAAACGACAATaGTGCTTCAGCATAGTTCAA +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLILDKRQ*CFSIVQ
Trigger: TTGAACTATGCTGAAGCAGCATTGTCGTTTATCGAG...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATCAAACACACATGCCCTaGAAAAGATCATTGTTCAAT +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYQTHMP*KRSLFN
Trigger: ATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTG...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCAGTCTAAGTATTTTGTaGCGTCATCACCTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCSLSIL*RHHLEK
Trigger: TTTTTCAAGGTGATGACGGCACAAAATACTTAGACT...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGTGGGATTGTGAACTCTaGCAAAAATTAGTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQWDCEL*QKLVKG
Trigger: CCCTTTCACTAATTTTTGGCAGAGTTCACAATCCCA...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGTGCATCACCTTTCTTTaGATTATTGTGTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQCITFL*IIVSRG
Trigger: TCCTCTGGACACAATAATCCAAAGAAAGGTGATGCA...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAATGTTCATGTTGCAGTaGTTTGCAGACAAAGTATTA +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSMFMLQ*FADKVL
Trigger: TAATACTTTGTCTGCAAACCACTGCAACATGAACAT...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCTCTAGCCTGGGATTATaGAAACTAGACAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGSSLGL*KLDKEG
Trigger: ACCTTCTTTGTCTAGTTTCCATAATCCCAGGCTAGA...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCATTCACAAGCAACAATTaGAGGATGGTTACTAACCAA +
Preference number: 4 (lower is better)
Translates to: MRISFSAESLIALHSMCSFTSNN*RMVTNQ
Trigger: TTGGTTAGTAACCATCCTCCAATTGTTGCTTGTGAA...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAATTCACAGAAATTGGTaGATGTCTTTTACGTACAAC +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSIHRNW*MSFTYN
Trigger: GTTGTACGTAAAAGACATCCACCAATTTCTGTGAAT...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGTTCTTGAAAGACTGCTaGGTGTTTCTTAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQFLKDC*VFLSTN
Trigger: GTTTGTGCTAAGAAACACCCAGCAGTCTTTCAAGAA...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGATTGGCTGTAAGAGGTaGATTTTCAAAGTAACACAC +
Preference number: 4 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMIGCKR*IFKVTH
Trigger: GTGTGTTACTTTGAAAATCCACCTCTTACAGCCAAT...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCACATACAAACACACATaGCCTGCAAAAGATCATTGT +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGTYKHT*PAKDHC
Trigger: ACAATGATCTTTTGCAGGGCATGTGTGTTTGTATGT...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTACATACAAACACACATaGCCTGCAAAAGATCATTGT +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLITYKHT*PAKDHC
Trigger: ACAATGATCTTTTGCAGGGCATGTGTGTTTGTATGT...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGTTCACAAGCAACAATTaGAGGATGGTTACTAACCAA +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQFTSNN*RMVTNQ
Trigger: TTGGTTAGTAACCATCCTCCAATTGTTGCTTGTGAA...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGATTGGCTGTAAGAGGTaGATTTTCAAAGTAACACAC +
Preference number: 4 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQIGCKR*IFKVTH
Trigger: GTGTGTTACTTTGAAAATCCACCTCTTACAGCCAAT...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR CAA 72 bp AACACAAATCTCAAGTCTGAACATTTCTTGTGCTATTaGCCAGGAAGTTGTAATATTGAAAAACTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: NTNLKSEHFLCY*PGSCNIEKLCS
Trigger: AGAGCACAGTTTTTCAATATTACAACTTCCTGGCAAATAGCACAAGAAATGTTCAGACTTGAGATTTGTGTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCATGTTCATGTTGCAGTaGTTTGCAGACAAAGTATTA +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGMFMLQ*FADKVL
Trigger: TAATACTTTGTCTGCAAACCACTGCAACATGAACAT...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTTTTGTTTTTAACGTGTaGCAAGATAGACCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIFVFNV*QDRPSF
Trigger: AAAAGAGGGTCTATCTTGCCACACGTTAAAAACAAA...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS TCA 90 bp GAGGCTCGGGCCGCCCGCGCGTTCTCCCGCGGCCCAGAATCCACTTaGCCCTGCTGGGCGCTCCCGCGGGCGGCGGACCCGGGTGGGTGC +
Preference number: 5 (lower is better)
Translates to: EARAARAFSRGPEST*PCWALPRAADPGGC
Trigger: GCACCCACCCGGGTCCGCCGCCCGCGGGAGCGCCCAGCAGGGTCAAGTGGATTCTGGGCCGCGGGAGAACGCGCGGGCGGCCCGAGCCTC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424600.5
CDS GCA 90 bp CGCGTTCTCCGCGGGCGCACAGGGCACTGCGGGTGGCGGGGCGGCTaGGCTCACCGCCACGGCCACGGCCGCGGGCGGGGACTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: RVLRGRTGHCGWRGG*AHRHGHGRGRGLLL
Trigger: AAGCAGAAGTCCCCGCCCGCGGCCGTGGCCGTGGCGGTGAGCGCAGCCGCCCCGCCACCCGCAGTGCCCTGTGCGCCCGCGGAGAACGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 90 bp CGCCGTCCCCGGCTGAGGTCCTCTCGGTGCGCCTGGTGGGCTTCTTaGCCGCGGACCTCCGGGCAGGCGCGGGCGCGTTCTCCGCGGGCG +
Preference number: 5 (lower is better)
Translates to: RRPRLRSSRCAWWAS*PRTSGQARARSPRA
Trigger: CGCCCGCGGAGAACGCGCCCGCGCCTGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGACCTCAGCCGGGGACGGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS CCA 90 bp TCCCCAGCGCGTCCGCGGCCGCGGGCTCCTCGGGCCGGTGGCAGTTaGCGCCGTCCCCGGCTGAGGTCCTCTCGGTGCGCCTGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: SPARPRPRAPRAGGS*RRPRLRSSRCAWWA
Trigger: AGCCCACCAGGCGCACCGAGAGGACCTCAGCCGGGGACGGCGCCAACTGCCACCGGCCCGAGGAGCCCGCGGCCGCGGACGCGCTGGGGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS GCA 90 bp CGGGCCGGTGGCAGTTGGCGCCGTCCCCGGCTGAGGTCCTCTCGGTaGGCCTGGTGGGCTTCTTGCCCGCGGACCTCCGGGCAGGCGCGG +
Preference number: 5 (lower is better)
Translates to: RAGGSWRRPRLRSSR*AWWASCPRTSGQAR
Trigger: CCGCGCCTGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGACCTCAGCCGGGGACGGCGCCAACTGCCACCGGCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS TCA 90 bp GGCCGCGGGCTCCTCGGGCCGGTGGCAGTTGGCGCCGTCCCCGGCTaGGGTCCTCTCGGTGCGCCTGGTGGGCTTCTTGCCCGCGGACCT +
Preference number: 5 (lower is better)
Translates to: GRGLLGPVAVGAVPG*GPLGAPGGLLARGP
Trigger: AGGTCCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGACCTCAGCCGGGGACGGCGCCAACTGCCACCGGCCCGAGGAGCCCGCGGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS CCA 90 bp GGTGGCAGTTGGCGCCGTCCCCGGCTGAGGTCCTCTCGGTGCGCCTaGTGGGCTTCTTGCCCGCGGACCTCCGGGCAGGCGCGGGCGCGT +
Preference number: 5 (lower is better)
Translates to: GGSWRRPRLRSSRCA*WASCPRTSGQARAR
Trigger: ACGCGCCCGCGCCTGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGACCTCAGCCGGGGACGGCGCCAACTGCCACC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS CCA 90 bp GGCAGTTGGCGCCGTCCCCGGCTGAGGTCCTCTCGGTGCGCCTGGTaGGCTTCTTGCCCGCGGACCTCCGGGCAGGCGCGGGCGCGTTCT +
Preference number: 5 (lower is better)
Translates to: GSWRRPRLRSSRCAW*ASCPRTSGQARARS
Trigger: AGAACGCGCCCGCGCCTGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGACCTCAGCCGGGGACGGCGCCAACTGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 90 bp GCGGCTGCGCTCACCGCCACGGCCACGGCCGCGGGCGGGGACTTCTaGTTCACGCCTTTACTCCCAGGGGCCTTGTTGGCTGTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: AAALTATATAAGGDF*FTPLLPGALLAVLG
Trigger: GCCAAGGACAGCCAACAAGGCCCCTGGGAGTAAAGGCGTGAAGCAGAAGTCCCCGCCCGCGGCCGTGGCCGTGGCGGTGAGCGCAGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS CCA 90 bp GAGGCTCGGGCCGCCCGCGCGCGGGAAGGGGGACAAACTGGCCTCTaGGTGTCGACTTCAAACTTGCCGCCCGTCTCCGGTCTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: EARAARAREGGQTGL*VSTSNLPPVSGLER
Trigger: CCTTTCCAGACCGGAGACGGGCGGCAAGTTTGAAGTCGACACCCAGAGGCCAGTTTGTCCCCCTTCCCGCGCGCGGGCGGCCCGAGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317233.8
ENST00000409579.5
ENST00000415384.2
ENST00000427118.1
ENST00000440445.6
ENST00000672197.1
ENST00000672204.1
ENST00000672756.2
ENST00000672857.1
CDS GCA 90 bp CCCGCGTGCGGCGCTTCTCGCAGGTCACGGAGGAGCGCAGCTCCTTaGGGTGGCTCGCTCTGTTGTTGCCACAGGGCCTGGTTTTGGTGG +
Preference number: 5 (lower is better)
Translates to: PACGASRRSRRSAAP*GGSLCCCHRAWFWW
Trigger: CCACCAAAACCAGGCCCTGTGGCAACAACAGAGCGAGCCACCGCAAGGAGCTGCGCTCCTCCGTGACCTGCGAGAAGCGCCGCACGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS GCA 90 bp CGGAGCTGCTCTCTGAGTCGCTGGAGGAGCTGCTGCTGCCGCTGCTaGTGCTGCTGCTGCTGCCCTTGCTGGAAGGCACCGAGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: RSCSLSRWRSCCCRC*CCCCCPCWKAPRFC
Trigger: GCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCTCCTCCAGCGACTCAGAGAGCAGCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS CCA 90 bp GTGCGGCGCTTCTCGCAGGTCACGGAGGAGCGCAGCTCCTTGCGGTaGCTCGCTCTGTTGTTGCCACAGGGCCTGGTTTTGGTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: VRRFSQVTEERSSLR*LALLLPQGLVLVGS
Trigger: GGAGCCCACCAAAACCAGGCCCTGTGGCAACAACAGAGCGAGCCACCGCAAGGAGCTGCGCTCCTCCGTGACCTGCGAGAAGCGCCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS TCA 90 bp GCCCTAGGACCACTGCCCCCGTTGGCAGCGGCCTCCTTCAGCCTCTaGTCATTCCCGGAGGAGGCAGAGGCAGCCACGGTCTGTGCTTTG +
Preference number: 5 (lower is better)
Translates to: ALGPLPPLAAASFSL*SFPEEAEAATVCAL
Trigger: CAAAGCACAGACCGTGGCTGCCTCTGCCTCCTCCGGGAATGATCAGAGGCTGAAGGAGGCCGCTGCCAACGGGGGCAGTGGTCCTAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS GCA 90 bp TGCTGCTGCTGCTGCTGCTGCCCTTGCTGGAAGGCACCGAGGTTCTaGAGTTGGGCTGCTGGACCACGGCGCTGTCAGAGAGAGCGCGGA +
Preference number: 5 (lower is better)
Translates to: CCCCCCCPCWKAPRF*SWAAGPRRCQRERG
Trigger: TCCGCGCTCTCTCTGACAGCGCCGTGGTCCAGCAGCCCAACTGCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 90 bp AGTCGCTGGAGGAGCTGCTGCTGCCGCTGCTGCTGCTGCTGCTGCTaGCCTTGCTGGAAGGCACCGAGGTTCTGCAGTTGGGCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: SRWRSCCCRCCCCCC*PCWKAPRFCSWAAG
Trigger: TCCAGCAGCCCAACTGCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCTCCTCCAGCGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 90 bp CTGAGTCGCTGGAGGAGCTGCTGCTGCCGCTGCTGCTGCTGCTGCTaGTGCCCTTGCTGGAAGGCACCGAGGTTCTGCAGTTGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: LSRWRSCCCRCCCCC*CPCWKAPRFCSWAA
Trigger: AGCAGCCCAACTGCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCTCCTCCAGCGACTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 90 bp ATCCGGAGCTGCTCTCTGAGTCGCTGGAGGAGCTGCTGCTGCCGCTaGTGCTGCTGCTGCTGCTGCCCTTGCTGGAAGGCACCGAGGTTC +
Preference number: 5 (lower is better)
Translates to: IRSCSLSRWRSCCCR*CCCCCCPCWKAPRF
Trigger: GAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCTCCTCCAGCGACTCAGAGAGCAGCTCCGGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 90 bp AGTCAGATCCGGAGCTGCTCTCTGAGTCGCTGGAGGAGCTGCTGCTaGCGCTGCTGCTGCTGCTGCTGCTGCCCTTGCTGGAAGGCACCG +
Preference number: 5 (lower is better)
Translates to: SQIRSCSLSRWRSCC*RCCCCCCCPCWKAP
Trigger: CGGTGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCTCCTCCAGCGACTCAGAGAGCAGCTCCGGATCTGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 90 bp CCGAGTCAGATCCGGAGCTGCTCTCTGAGTCGCTGGAGGAGCTGCTaGTGCCGCTGCTGCTGCTGCTGCTGCTGCCCTTGCTGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: PSQIRSCSLSRWRSC*CRCCCCCCCPCWKA
Trigger: TGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCTCCTCCAGCGACTCAGAGAGCAGCTCCGGATCTGACTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTACCGAGGTTCTGCAGTaGGGCTGCTGGACCACGGCG +
Preference number: 5 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGTEVLQ*GCWTTA
Trigger: CGCCGTGGTCCAGCAGCCCAACTGCAGAACCTCGGT...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCTCGGGCCGGTGGCAGTaGGCGCCGTCCCCGGCTGAG +
Preference number: 5 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLASGRWQ*APSPAE
Trigger: CTCAGCCGGGGACGGCGCCAACTGCCACCGGCCCGA...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS GCA 90 bp TCTCTGAGTCGCTGGAGGAGCTGCTGCTGCCGCTGCTGCTGCTGCTaGTGCTGCCCTTGCTGGAAGGCACCGAGGTTCTGCAGTTGGGCT +
Preference number: 5 (lower is better)
Translates to: SLSRWRSCCCRCCCC*CCPCWKAPRFCSWA
Trigger: AGCCCAACTGCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCTCCTCCAGCGACTCAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 90 bp TGCTCTCTGAGTCGCTGGAGGAGCTGCTGCTGCCGCTGCTGCTGCTaGTGCTGCTGCCCTTGCTGGAAGGCACCGAGGTTCTGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: CSLSRWRSCCCRCCC*CCCPCWKAPRFCSW
Trigger: CCAACTGCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCTCCTCCAGCGACTCAGAGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 90 bp AGCTGCTCTCTGAGTCGCTGGAGGAGCTGCTGCTGCCGCTGCTGCTaGTGCTGCTGCTGCCCTTGCTGGAAGGCACCGAGGTTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: SCSLSRWRSCCCRCC*CCCCPCWKAPRFCS
Trigger: ACTGCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCTCCTCCAGCGACTCAGAGAGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 90 bp AAGTTGGCTGCCTTCTACCAGCTCCCGGTGGTCCCACAGAGCAGATaGGCCACAGGCTGTGTCCTGTACACCCTGGCCCTGGGAGCGCAG +
Preference number: 5 (lower is better)
Translates to: KLAAFYQLPVVPQSR*ATGCVLYTLALGAQ
Trigger: CTGCGCTCCCAGGGCCAGGGTGTACAGGACACAGCCTGTGGCGCATCTGCTCTGTGGGACCACCGGGAGCTGGTAGAAGGCAGCCAACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGACCGAGGTTCTGCAGTaGGGCTGCTGGACCACGGCG +
Preference number: 5 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQTEVLQ*GCWTTA
Trigger: CGCCGTGGTCCAGCAGCCCAACTGCAGAACCTCGGT...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS GCA 90 bp CAGCCTCTGATCATTCCCGGAGGAGGCAGAGGCAGCCACGGTCTGTaGTTTGGACAGAGGGTACTCCTCCTGCTCGGACTCCAGGTCGGA +
Preference number: 5 (lower is better)
Translates to: QPLIIPGGGRGSHGL*FGQRVLLLLGLQVG
Trigger: TCCGACCTGGAGTCCGAGCAGGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGGCTGCCTCTGCCTCCTCCGGGAATGATCAGAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS CCA 90 bp CTGAACACAGTGTCCGCTGCTGCTGTGCTTGGCCGCCATGGCAGGTaGCCTCTCCTGGGTCTGAAGGCCCACCTCCACATTGCACACTTG +
Preference number: 5 (lower is better)
Translates to: LNTVSAAAVLGRHGR*PLLGLKAHLHIAHL
Trigger: CAAGTGTGCAATGTGGAGGTGGGCCTTCAGACCCAGGAGAGGCCACCTGCCATGGCGGCCAAGCACAGCAGCAGCGGACACTGTGTTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS CCA 90 bp GGGATGGAGGAAAGTTCTGAACACAGTGTCCGCTGCTGCTGTGCTTaGCCGCCATGGCAGGTGGCCTCTCCTGGGTCTGAAGGCCCACCT +
Preference number: 5 (lower is better)
Translates to: GMEESSEHSVRCCCA*PPWQVASPGSEGPP
Trigger: AGGTGGGCCTTCAGACCCAGGAGAGGCCACCTGCCATGGCGGCCAAGCACAGCAGCAGCGGACACTGTGTTCAGAACTTTCCTCCATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS CCA 90 bp TCTGATCATTCCCGGAGGAGGCAGAGGCAGCCACGGTCTGTGCTTTaGACAGAGGGTACTCCTCCTGCTCGGACTCCAGGTCGGAGTCCG +
Preference number: 5 (lower is better)
Translates to: SDHSRRRQRQPRSVL*TEGTPPARTPGRSP
Trigger: CGGACTCCGACCTGGAGTCCGAGCAGGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGGCTGCCTCTGCCTCCTCCGGGAATGATCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS CCA 90 bp CTCTCAGAGTCCTTGGTGGCAGGGGCGCTCAATACCCCTGGCTCCTaGGGCAGGTGTTCTGGGATCCTGGACAGGAGGGTCAGGTCGATT +
Preference number: 5 (lower is better)
Translates to: LSESLVAGALNTPGS*GRCSGILDRRVRSI
Trigger: AATCGACCTGACCCTCCTGTCCAGGATCCCAGAACACCTGCCCCAGGAGCCAGGGGTATTGAGCGCCCCTGCCACCAAGGACTCTGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS GCA 90 bp TGTGTTGCTCTCTGTTGGCCGTCAGAGGGTGGGTGCCCAGCCTTCTaGCAGCCCATAGTGCCTCTCTTACTCTGCTGCACGGGGACAGCT +
Preference number: 5 (lower is better)
Translates to: CVALCWPSEGGCPAF*QPIVPLLLCCTGTA
Trigger: AGCTGTCCCCGTGCAGCAGAGTAAGAGAGGCACTATGGGCTGGCAGAAGGCTGGGCACCCACCCTCTGACGGCCAACAGAGAGCAACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS GCA 90 bp CCATGGCAGGTGGCCTCTCCTGGGTCTGAAGGCCCACCTCCACATTaGACACTTGTTTGGCCCGAGGCTGCTGTCTGCCAACACCATCTC +
Preference number: 5 (lower is better)
Translates to: PWQVASPGSEGPPPH*TLVWPEAAVCQHHL
Trigger: GAGATGGTGTTGGCAGACAGCAGCCTCGGGCCAAACAAGTGTGCAATGTGGAGGTGGGCCTTCAGACCCAGGAGAGGCCACCTGCCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS GCA 90 bp GCAGAGGCAGCCACGGTCTGTGCTTTGGACAGAGGGTACTCCTCCTaGTCGGACTCCAGGTCGGAGTCCGAGGAGGAGGATGAAGATGAC +
Preference number: 5 (lower is better)
Translates to: AEAATVCALDRGYSS*SDSRSESEEEDEDD
Trigger: GTCATCTTCATCCTCCTCCTCGGACTCCGACCTGGAGTCCGAGCAGGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGGCTGCCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS GCA 90 bp CTCACCAGGGATTCCCCAGAATTCCTAGAGAGCAGCTCAGAGCCCTaGAGTTGTGCCTCACCACGCGAACCAAACCTCGCACTCCCCGCC +
Preference number: 5 (lower is better)
Translates to: LTRDSPEFLESSSEP*SCASPREPNLALPA
Trigger: GGCGGGGAGTGCGAGGTTTGGTTCGCGTGGTGAGGCACAACTGCAGGGCTCTGAGCTGCTCTCTAGGAATTCTGGGGAATCCCTGGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415384.2
ENST00000427118.1
CDS CCA 90 bp GAAAGTTCTGAACACAGTGTCCGCTGCTGCTGTGCTTGGCCGCCATaGCAGGTGGCCTCTCCTGGGTCTGAAGGCCCACCTCCACATTGC +
Preference number: 5 (lower is better)
Translates to: ESSEHSVRCCCAWPP*QVASPGSEGPPPHC
Trigger: GCAATGTGGAGGTGGGCCTTCAGACCCAGGAGAGGCCACCTGCCATGGCGGCCAAGCACAGCAGCAGCGGACACTGTGTTCAGAACTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCCTGGCAGGCTCCGGCTaGCTGGCAGGGACTCCCCTG +
Preference number: 5 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGLAGSG*LAGTPL
Trigger: CAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCAG...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAATCGGGCCGGTGGCAGTaGGCGCCGTCCCCGGCTGAG +
Preference number: 5 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKSGRWQ*APSPAE
Trigger: CTCAGCCGGGGACGGCGCCAACTGCCACCGGCCCGA...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCGGACCACTGCCCCCGTaGGCAGCGGCCTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGGPLPP*AAASFS
Trigger: GCTGAAGGAGGCCGCTGCCAACGGGGGCAGTGGTCC...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS TCA 90 bp CTTGGCTCTGGCAGGCTCCGGCTTGCTGGCAGGGACTCCCCTGTATaGTGTGCAGTGCACGCTGGTTTCCGAAGACGACTTCAGCTTAGG +
Preference number: 5 (lower is better)
Translates to: LGSGRLRLAGRDSPV*CAVHAGFRRRLQLR
Trigger: CCTAAGCTGAAGTCGTCTTCGGAAACCAGCGTGCACTGCACATCATACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCAGAGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000430789.1
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
ENST00000673529.1
CDS TCA 90 bp GTGAACGGTGCTGATAAAGACTCACCTCCCCCTGCTTGGGGATGCTaGACTTGGAGAGCTTGGCCTTGGCTCTGGCAGGCTCCGGCTTGC +
Preference number: 5 (lower is better)
Translates to: VNGADKDSPPPAWGC*TWRAWPWLWQAPAC
Trigger: GCAAGCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCAAGTTCAGCATCCCCAAGCAGGGGGAGGTGAGTCTTTATCAGCACCGTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498090.1
CDS GCA 90 bp GGTGGGTGCCCAGCCTTCTGCCAGCCCATAGTGCCTCTCTTACTCTaGTGCACGGGGACAGCTGCTGGTGTGGAAGTTGTAGTGCTACAG +
Preference number: 5 (lower is better)
Translates to: GGCPAFCQPIVPLLL*CTGTAAGVEVVVLQ
Trigger: CTGTAGCACTACAACTTCCACACCAGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGGCACTATGGGCTGGCAGAAGGCTGGGCACCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000432037.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS GCA 90 bp AGAGAGCCCTGTTGTGTTGCTCTCTGTTGGCCGTCAGAGGGTGGGTaGCCAGCCTTCTGCCAGCCCATAGTGCCTCTCTTACTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: REPCCVALCWPSEGG*PAFCQPIVPLLLCC
Trigger: GCAGCAGAGTAAGAGAGGCACTATGGGCTGGCAGAAGGCTGGGCACCCACCCTCTGACGGCCAACAGAGAGCAACACAACAGGGCTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS CCA 90 bp CCTGAGAGAGCCCTGTTGTGTTGCTCTCTGTTGGCCGTCAGAGGGTaGGTGCCCAGCCTTCTGCCAGCCCATAGTGCCTCTCTTACTCTG +
Preference number: 5 (lower is better)
Translates to: PERALLCCSLLAVRG*VPSLLPAHSASLTL
Trigger: CAGAGTAAGAGAGGCACTATGGGCTGGCAGAAGGCTGGGCACCCACCCTCTGACGGCCAACAGAGAGCAACACAACAGGGCTCTCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS CCA 90 bp CACAGAGCAGATGCGCCACAGGCTGTGTCCTGTACACCCTGGCCCTaGGAGCGCAGGCTCAGTTTGCACAGCATTACTGAAGCAGACCCT +
Preference number: 5 (lower is better)
Translates to: HRADAPQAVSCTPWP*ERRLSLHSITEADP
Trigger: AGGGTCTGCTTCAGTAATGCTGTGCAAACTGAGCCTGCGCTCCCAGGGCCAGGGTGTACAGGACACAGCCTGTGGCGCATCTGCTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS CCA 90 bp TGGTCCCACAGAGCAGATGCGCCACAGGCTGTGTCCTGTACACCCTaGCCCTGGGAGCGCAGGCTCAGTTTGCACAGCATTACTGAAGCA +
Preference number: 5 (lower is better)
Translates to: WSHRADAPQAVSCTP*PWERRLSLHSITEA
Trigger: TGCTTCAGTAATGCTGTGCAAACTGAGCCTGCGCTCCCAGGGCCAGGGTGTACAGGACACAGCCTGTGGCGCATCTGCTCTGTGGGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp CCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCTTGGAGAGCTTGGCCTaGGCTCTGGCAGGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: PGRVPLGDHSSSCTEETFLESLA*ALAGSG
Trigger: GCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCAA...GAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp GGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCCTGAACTTGGAGAGCTaGGCCTTGGCTCTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: GEASGHLQSWRKVKGKQGLNLES*ALALAG
Trigger: GCCTGCCAGAGCCAAGGCCAAGCTCTCCAAGTTCAG...GCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CAA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCGCCTGGTGGGCTTCTaGCCCGCGGACCTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRRLVGF*PADLRA
Trigger: TGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGCG...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTCGGGCCGGTGGCAGTaGGCGCCGTCCCCGGCTGAG +
Preference number: 5 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPSGRWQ*APSPAE
Trigger: CTCAGCCGGGGACGGCGCCAACTGCCACCGGCCCGA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGGACCACTGCCCCCGTaGGCAGCGGCCTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTGPLPP*AAASFS
Trigger: GCTGAAGGAGGCCGCTGCCAACGGGGGCAGTGGTCC...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCCAGTGCAGGCCCTGTaGGGAGTACTGGACCAGGTG +
Preference number: 5 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAPVQAL*GVLDQV
Trigger: CACCTGGTCCAGTACTCCCAACAGGGCCTGCACTGG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS TCA 90 bp GAACCGCTGACTGGGGCTGCCAGAAATGTAAACCCTGGGTGCAAGTaGCGGGATCCCTCCAGCGTCAAGCCGAAGAGTCATCCTCTCACC +
Preference number: 5 (lower is better)
Translates to: EPLTGAARNVNPGCK*RDPSSVKPKSHPLT
Trigger: GGTGAGAGGATGACTCTTCGGCTTGACGCTGGAGGGATCCCGTCACTTGCACCCAGGGTTTACATTTCTGGCAGCCCCAGTCAGCGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415384.2
ENST00000427118.1
CDS CCA 90 bp TCTTCATGCACACAGACAAGTTGGCTGCCTTCTACCAGCTCCCGGTaGTCCCACAGAGCAGATGCGCCACAGGCTGTGTCCTGTACACCC +
Preference number: 5 (lower is better)
Translates to: SSCTQTSWLPSTSSR*SHRADAPQAVSCTP
Trigger: GGGTGTACAGGACACAGCCTGTGGCGCATCTGCTCTGTGGGACCACCGGGAGCTGGTAGAAGGCAGCCAACTTGTCTGTGTGCATGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTCTCCCCAGTAAGTCGTaGAACGTCTTTCTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGLPSKS*NVFLLR
Trigger: CCTCAGAAGAAAGACGTTCAACGACTTACTGGGGAG...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317233.8
ENST00000672756.2
CDS-3UTR CAA 90 bp GAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCACGGATCTTGGCCGTCCATaGGCCTCACATACGCGGTCG +
Preference number: 5 (lower is better)
Translates to: EASGHLQSWRKVKGKQGTDLGRP*ASHTRS
Trigger: CGACCGCGTATGTGAGGCCAATGGACGGCCAAGATC...CGTGCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CAA 90 bp CTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGCTGGCAGGCTCCGGCTaGCTGGCAGGGACTCCCCTG +
Preference number: 5 (lower is better)
Translates to: LGDHSSSCTEETFHFSTTLAGSG*LAGTPL
Trigger: CAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCAG...CGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCGCCTGGTGGGCTTCTaGCCCGCGGACCTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPRLVGF*PADLRA
Trigger: TGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGCG...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGCCACGGTCTGTGCTTaGGACAGAGGGTACTCCTCC +
Preference number: 5 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAATVCA*DRGYSS
Trigger: GGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGGC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGCCACGGTCTGTGCTTaGGACAGAGGGTACTCCTCC +
Preference number: 5 (lower is better)
Translates to: QTHRTQEEALVAAAPERNATVCA*DRGYSS
Trigger: GGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGGC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGACAAGTTTCTGCCTCTaGCAGTCCCTGTGGCCGTTG +
Preference number: 5 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQTSFCL*QSLWPL
Trigger: CAACGGCCACAGGGACTGCAAGAGGCAGAAACTTGT...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS TCA 90 bp TGCTGGACCAGGCTGGGTTTTGAAGCTAGGGATGGAGGAAAGTTCTaGACACAGTGTCCGCTGCTGCTGTGCTTGGCCGCCATGGCAGGT +
Preference number: 5 (lower is better)
Translates to: CWTRLGFEARDGGKF*TQCPLLLCLAAMAG
Trigger: ACCTGCCATGGCGGCCAAGCACAGCAGCAGCGGACACTGTGTTCAGAACTTTCCTCCATCCCTAGCTTCAAAACCCAGCCTGGTCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS TCA 90 bp GGTCGGAGTCCGAGGAGGAGGATGAAGATGACGACTCTGTCTCAATaGACTCCTTGGATTTGGGGACGATCCTGCTTAGCCCCCGCGTGC +
Preference number: 5 (lower is better)
Translates to: GRSPRRRMKMTTLSQ*TPWIWGRSCLAPAC
Trigger: GCACGCGGGGGCTAAGCAGGATCGTCCCCAAATCCAAGGAGTTCATTGAGACAGAGTCGTCATCTTCATCCTCCTCCTCGGACTCCGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS TCA 90 bp CTGGCTAACATGGTGAAAACCCGTCTCTACGTGAGGTCTCCGCCGTaGGGCTGCAGCTGGCTGTCGGCCTTAGGCTTTTTGCTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: LANMVKTRLYVRSPP*GCSWLSALGFLLEE
Trigger: CTCTTCCAGCAAAAAGCCTAAGGCCGACAGCCAGCTGCAGCCTCACGGCGGAGACCTCACGTAGAGACGGGTTTTCACCATGTTAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671937.1
CDS GCA 90 bp GGGTGCCCAGCCTTCTGCCAGCCCATAGTGCCTCTCTTACTCTGCTaGACGGGGACAGCTGCTGGTGTGGAAGTTGTAGTGCTACAGATA +
Preference number: 5 (lower is better)
Translates to: GCPAFCQPIVPLLLC*TGTAAGVEVVVLQI
Trigger: TATCTGTAGCACTACAACTTCCACACCAGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGGCACTATGGGCTGGCAGAAGGCTGGGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000432037.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS GCA 90 bp TTGAAGCTAGGGATGGAGGAAAGTTCTGAACACAGTGTCCGCTGCTaGTGTGCTTGGCCGCCATGGCAGGTGGCCTCTCCTGGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: LKLGMEESSEHSVRC*CAWPPWQVASPGSE
Trigger: TTCAGACCCAGGAGAGGCCACCTGCCATGGCGGCCAAGCACAGCAGCAGCGGACACTGTGTTCAGAACTTTCCTCCATCCCTAGCTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS GCA 90 bp GTTTTGAAGCTAGGGATGGAGGAAAGTTCTGAACACAGTGTCCGCTaGTGCTGTGCTTGGCCGCCATGGCAGGTGGCCTCTCCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: VLKLGMEESSEHSVR*CCAWPPWQVASPGS
Trigger: AGACCCAGGAGAGGCCACCTGCCATGGCGGCCAAGCACAGCAGCAGCGGACACTGTGTTCAGAACTTTCCTCCATCCCTAGCTTCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS GCA 90 bp GCAGGCTCCGGCTTGCTGGCAGGGACTCCCCTGTATGATGTGCAGTaGACGCTGGTTTCCGAAGACGACTTCAGCTTAGGAGACTCATCA +
Preference number: 5 (lower is better)
Translates to: AGSGLLAGTPLYDVQ*TLVSEDDFSLGDSS
Trigger: TGATGAGTCTCCTAAGCTGAAGTCGTCTTCGGAAACCAGCGTGCACTGCACATCATACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000430789.1
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
ENST00000673529.1
CDS GCA 90 bp TTTAGACATGCTGAGAAGCGCATGTCTCCATCAGGGCCCTACCTCTaGTTCTCCACAGTTGGCCTAGAACCGGAAGCCCCTCCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: FRHAEKRMSPSGPYL*FSTVGLEPEAPPRP
Trigger: GGGCCTTGGAGGGGCTTCCGGTTCTAGGCCAACTGTGGAGAAGCAGAGGTAGGGCCCTGATGGAGACATGCGCTTCTCAGCATGTCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440445.6
CDS GCA 90 bp CCCTCTCTGCAATTCTCCTGCCACCCAGTTTTGCCCCTTGAGTTCTaGCATAACCGCACCTGGAGTGAGGCGCTCCTTGTCTCTAGCCTC +
Preference number: 5 (lower is better)
Translates to: PSLQFSCHPVLPLEF*HNRTWSEALLVSSL
Trigger: GAGGCTAGAGACAAGGAGCGCCTCACTCCAGGTGCGGTTATGGCAGAACTCAAGGGGCAAAACTGGGTGGCAGGAGAATTGCAGAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483600.1
CDS GCA 90 bp CACTTGGTGATGCACCAGAACAGGAAGCCTGTAATGGCCTTGGGGTaGATAAAAAGGGATCTATCCGGCCGGGCGCGGTGGCTGGCTCAT +
Preference number: 5 (lower is better)
Translates to: HLVMHQNRKPVMALG*IKRDLSGRARWLAH
Trigger: ATGAGCCAGCCACCGCGCCCGGCCGGATAGATCCCTTTTTATGCACCCCAAGGCCATTACAGGCTTCCTGTTCTGGTGCATCACCAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498090.1
CDS CCA 90 bp TTCTGGGCAAGAACCGCTGACTGGGGCTGCCAGAAATGTAAACCCTaGGTGCAAGTGACGGGATCCCTCCAGCGTCAAGCCGAAGAGTCA +
Preference number: 5 (lower is better)
Translates to: FWARTADWGCQKCKP*VQVTGSLQRQAEES
Trigger: TGACTCTTCGGCTTGACGCTGGAGGGATCCCGTCACTTGCACCCAGGGTTTACATTTCTGGCAGCCCCAGTCAGCGGTTCTTGCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415384.2
ENST00000427118.1
CDS CCA 90 bp CTGCCTGTACAGCCTAGACTCAGGATCGCCCTAAGGGAGTTGGCATaGAAGATTTCAGAGCTGGGCAGACTGGGCGGGGACCTCTCATCT +
Preference number: 5 (lower is better)
Translates to: LPVQPRLRIALRELA*KISELGRLGGDLSS
Trigger: AGATGAGAGGTCCCCGCCCAGTCTGCCCAGCTCTGAAATCTTCCATGCCAACTCCCTTAGGGCGATCCTGAGTCTAGGCTGTACAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672822.1
ENST00000683540.1
CDS-3UTR CAA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTACTGGCAGGCTCCGGCTaGCTGGCAGGGACTCCCCTG +
Preference number: 5 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLLAGSG*LAGTPL
Trigger: CAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCAG...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACCTGGCAGGCTCCGGCTaGCTGGCAGGGACTCCCCTG +
Preference number: 5 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNLAGSG*LAGTPL
Trigger: CAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCAG...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTGGACCACTGCCCCCGTaGGCAGCGGCCTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPGPLPP*AAASFS
Trigger: GCTGAAGGAGGCCGCTGCCAACGGGGGCAGTGGTCC...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGGACCACTGCCCCCGTaGGCAGCGGCCTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNGPLPP*AAASFS
Trigger: GCTGAAGGAGGCCGCTGCCAACGGGGGCAGTGGTCC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCGCGCTCTCAGAGTCCTaGGTGGCAGGGGCGCTCAAT +
Preference number: 5 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGALSES*VAGALN
Trigger: ATTGAGCGCCCCTGCCACCAAGGACTCTGAGAGCGC...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTGGTATTGCCACACTGTaGATGTTCATGTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGGIATL*MFMLQW
Trigger: CCACTGCAACATGAACATCAACAGTGTGGCAATACC...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAACAGTCCCTGTGGCCGTaGGAGCCTGGAGACCACGGC +
Preference number: 5 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKQSLWP*EPGDHG
Trigger: GCCGTGGTCTCCAGGCTCCAACGGCCACAGGGACTG...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCAGTCCCTGTGGCCGTaGGAGCCTGGAGACCACGGC +
Preference number: 5 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRQSLWP*EPGDHG
Trigger: GCCGTGGTCTCCAGGCTCCAACGGCCACAGGGACTG...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAATTCTCGGTTTTCCTaGGCCAGGTTGTCGGCCATC +
Preference number: 5 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQNSRFS*ARLSAI
Trigger: GATGGCCGACAACCTGGCCAAGGAAAACCGAGAATT...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS TCA 90 bp CTGGTTTCCGAAGACGACTTCAGCTTAGGAGACTCATCAGGGGCCTaGTCTTGGCCGTCCATTGGCCTCACATACGCGGTCGGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: LVSEDDFSLGDSSGA*SWPSIGLTYAVGFC
Trigger: GCAGAAACCGACCGCGTATGTGAGGCCAATGGACGGCCAAGATCAGGCCCCTGATGAGTCTCCTAAGCTGAAGTCGTCTTCGGAAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000430789.1
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS GCA 90 bp CTGCCAGCCCATAGTGCCTCTCTTACTCTGCTGCACGGGGACAGCTaGTGGTGTGGAAGTTGTAGTGCTACAGATAGACGAGGGCTGGTT +
Preference number: 5 (lower is better)
Translates to: LPAHSASLTLLHGDS*WCGSCSATDRRGLV
Trigger: AACCAGCCCTCGTCTATCTGTAGCACTACAACTTCCACACCAGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGGCACTATGGGCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000432037.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS GCA 90 bp AGGCTGTGTCCTGTACACCCTGGCCCTGGGAGCGCAGGCTCAGTTTaGACAGCATTACTGAAGCAGACCCTGGGGTACCGGATTATTTCT +
Preference number: 5 (lower is better)
Translates to: RLCPVHPGPGSAGSV*TALLKQTLGYRIIS
Trigger: AGAAATAATCCGGTACCCCAGGGTCTGCTTCAGTAATGCTGTGCAAACTGAGCCTGCGCTCCCAGGGCCAGGGTGTACAGGACACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS CCA 90 bp CCAGCCCATAGTGCCTCTCTTACTCTGCTGCACGGGGACAGCTGCTaGTGTGGAAGTTGTAGTGCTACAGATAGACGAGGGCTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: PAHSASLTLLHGDSC*CGSCSATDRRGLVL
Trigger: CAGAACCAGCCCTCGTCTATCTGTAGCACTACAACTTCCACACCAGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGGCACTATGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000432037.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS CCA 90 bp TCCTGCCACCCAGTTTTGCCCCTTGAGTTCTGCCATAACCGCACCTaGAGTGAGGCGCTCCTTGTCTCTAGCCTCAACGTCTTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: SCHPVLPLEFCHNRT*SEALLVSSLNVFLC
Trigger: GCAAAGGAAGACGTTGAGGCTAGAGACAAGGAGCGCCTCACTCCAGGTGCGGTTATGGCAGAACTCAAGGGGCAAAACTGGGTGGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483600.1
CDS-3UTR CAA 90 bp GGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGCCTGAGAGAGCCCTGTaGTGTTGCTCTCTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: GTGMRKQVISTIPAVGSRPERAL*CCSLLA
Trigger: GGCCAACAGAGAGCAACACAACAGGGCTCTCTCAGG...CCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCACATTGCACACTTGTTaGGCCCGAGGCTGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLATLHTC*ARGCCL
Trigger: CAGACAGCAGCCTCGGGCCAAACAAGTGTGCAATGT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGTTTCAATGGTCAGTGGAGCTGGCAGGCTCCGGCTaGCTGGCAGGGACTCCCCTG +
Preference number: 5 (lower is better)
Translates to: SCRRSDVAENTGFQWSVELAGSG*LAGTPL
Trigger: CAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCAG...CTCCACTGACCATTGAAACCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CAA 90 bp GGGAAGCAAGGCACGTCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGTTTTTGGAGAGCTTGGCCTaGGCTCTGGCAGGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: GKQGTSCRRSDVAENTGFLESLA*ALAGSG
Trigger: GCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCAA...AAACCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGACGTGCCTTGCTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CAA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTGAAGTAAACAAACTGTaGCCATTAGGTCGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGEVNKL*PLGRLE
Trigger: TTCCAGCCGACCTAATGGCAACAGTTTGTTTACTTC...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCACAAGTTTCTGCCTCTaGCAGTCCCTGTGGCCGTTG +
Preference number: 5 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLATSFCL*QSLWPL
Trigger: CAACGGCCACAGGGACTGCAAGAGGCAGAAACTTGT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACCCAGTGCAGGCCCTGTaGGGAGTACTGGACCAGGTG +
Preference number: 5 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHPVQAL*GVLDQV
Trigger: CACCTGGTCCAGTACTCCCAACAGGGCCTGCACTGG...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCCAGTGCAGGCCCTGTaGGGAGTACTGGACCAGGTG +
Preference number: 5 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHPVQAL*GVLDQV
Trigger: CACCTGGTCCAGTACTCCCAACAGGGCCTGCACTGG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS GCA 90 bp GTTGTCACACTTGCGTTTCCTCTTGGATTTTGGCAAAGCCTTTTCTaGAGGTGTGTCCGAGGTGTGGCTGGGCGGTGCGCTCTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: VVTLAFPLGFWQSLF*RCVRGVAGRCALRV
Trigger: GACTCTGAGAGCGCACCGCCCAGCCACACCTCGGACACACCTGCAGAAAAGGCTTTGCCAAAATCCAAGAGGAAACGCAAGTGTGACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS CCA 90 bp CAGCACTCTCCCCTTTGTTCCTTTTTCTGGGCAAGAACCGCTGACTaGGGCTGCCAGAAATGTAAACCCTGGGTGCAAGTGACGGGATCC +
Preference number: 5 (lower is better)
Translates to: QHSPLCSFFWARTAD*GCQKCKPWVQVTGS
Trigger: GGATCCCGTCACTTGCACCCAGGGTTTACATTTCTGGCAGCCCCAGTCAGCGGTTCTTGCCCAGAAAAAGGAACAAAGGGGAGAGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415384.2
ENST00000427118.1
CDS-3UTR CAA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGTGTCGACTTCAAACTaGCCGCCCGTCTCCGGTCTG +
Preference number: 5 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHVSTSN*PPVSGL
Trigger: CAGACCGGAGACGGGCGGCAAGTTTGAAGTCGACAC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp GGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGGTGTTCTGGATCCGGTaGGAGAGTTCATCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: GTGMRKQVISTIPAVGSRVFWIR*ESSSPL
Trigger: CAAGGGGGATGAACTCTCCAACCGGATCCAGAACAC...CCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCTTGTGTTGCTCTCTGTaGGCCGTCAGAGGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGLCCSL*AVRGWV
Trigger: CACCCACCCTCTGACGGCCAACAGAGAGCAACACAA...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp CACTTTGCCAGGTGCTTGAATAGCAGAAAGTGGTGGAAGCCAGGTCATCTCCTGGATCTTGGCCGTCCATaGGCCTCACATACGCGGTCG +
Preference number: 5 (lower is better)
Translates to: HFARCLNSRKWWKPGHLLDLGRP*ASHTRS
Trigger: CGACCGCGTATGTGAGGCCAATGGACGGCCAAGATC...CAGGAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGCTGGCAGGCTCCGGCTaGCTGGCAGGGACTCCCCTG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLLAGSG*LAGTPL
Trigger: CAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCAG...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTTGGAGAGCTTGGCCTaGGCTCTGGCAGGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPLESLA*ALAGSG
Trigger: GCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCAA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp CGTAGCAGAGAACACAGGGTTTCAATGGTCAGTGGAGCTGAGACAGAGGAGGGCTTGGGGATGCTGAACTaGGAGAGCTTGGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: RSREHRVSMVSGAETEEGLGMLN*ESLALA
Trigger: AGCCAAGGCCAAGCTCTCCAAGTTCAGCATCCCCAA...GCCCTCCTCTGTCTCAGCTCCACTGACCATTGAAACCCTGTGTTCTCTGCTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CAA 90 bp ATTCCTTCCCAGGAGCATCCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTTGGGGATGCTGAACTaGGAGAGCTTGGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: IPSQEHPGRVPLGDHSSSLGMLN*ESLALA
Trigger: AGCCAAGGCCAAGCTCTCCAAGTTCAGCATCCCCAA...GGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGGATGCTCCTGGGAAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACGCCTGGTGGGCTTCTaGCCCGCGGACCTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKRLVGF*PADLRA
Trigger: TGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGCG...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTTCGGGCCGGTGGCAGTaGGCGCCGTCCCCGGCTGAG +
Preference number: 5 (lower is better)
Translates to: FQMLEGQSQMQIPQALLISGRWQ*APSPAE
Trigger: CTCAGCCGGGGACGGCGCCAACTGCCACCGGCCCGA...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTGGCTCGCTCTGTTGTaGCCACAGGGCCTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNWLALL*PQGLVL
Trigger: CAAAACCAGGCCCTGTGGCAACAACAGAGCGAGCCA...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAATGCTCCTCCAGCTCCTaGGCGATGTCACTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQCSSSS*AMSLVV
Trigger: GACCACCAGTGACATCGCCAAGGAGCTGGAGGAGCA...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCAGGGTCAGGTCGATTTaGACCCAGAGAGACCTGATC +
Preference number: 5 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLARVRSI*TQRDLI
Trigger: GATCAGGTCTCTCTGGGTCAAAATCGACCTGACCCT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCACAGTCCCTGTGGCCGTaGGAGCCTGGAGACCACGGC +
Preference number: 5 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSQSLWP*EPGDHG
Trigger: GCCGTGGTCTCCAGGCTCCAACGGCCACAGGGACTG...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACGTGATGCTGACGTGGTaGGCCGCCATCTGGTGGATG +
Preference number: 5 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHVMLTW*AAIWWM
Trigger: CATCCACCAGATGGCGGCCAACCACGTCAGCATCAC...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCGTGATGCTGACGTGGTaGGCCGCCATCTGGTGGATG +
Preference number: 5 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETVMLTW*AAIWWM
Trigger: CATCCACCAGATGGCGGCCAACCACGTCAGCATCAC...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCCAGTGCAGGCCCTGTaGGGAGTACTGGACCAGGTG +
Preference number: 5 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYPVQAL*GVLDQV
Trigger: CACCTGGTCCAGTACTCCCAACAGGGCCTGCACTGG...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATCCACCGCATTCCAGCTaGGGCTACAGAGCCAGACCC +
Preference number: 5 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNPPHSS*GYRARP
Trigger: GGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGG...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAATCCCAGGGCTACTGGTaGAACAGGAACCCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQSQGYW*NRNPVA
Trigger: GGCCACAGGGTTCCTGTTCAACCAGTAGCCCTGGGA...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS CCA 90 bp CGTCCATTGGCCTCACATACGCGGTCGGTTTCTGCTGGACCAGGCTaGGTTTTGAAGCTAGGGATGGAGGAAAGTTCTGAACACAGTGTC +
Preference number: 5 (lower is better)
Translates to: RPLASHTRSVSAGPG*VLKLGMEESSEHSV
Trigger: GACACTGTGTTCAGAACTTTCCTCCATCCCTAGCTTCAAAACCCAGCCTGGTCCAGCAGAAACCGACCGCGTATGTGAGGCCAATGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS CCA 90 bp CTTCTGCTTCACGCCTTTACTCCCAGGGGCCTTGTTGGCTGTCCTTaGCCTTTGCTCCTCCTTGCAAGTGCTCTTGATCTCCTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: LLLHAFTPRGLVGCP*PLLLLASALDLLLS
Trigger: AGAGAGAAGGAGATCAAGAGCACTTGCAAGGAGGAGCAAAGGCCAAGGACAGCCAACAAGGCCCCTGGGAGTAAAGGCGTGAAGCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCTCCACATTGCACACTaGTTTGGCCCGAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLHIAH*FGPRLL
Trigger: CAGCAGCCTCGGGCCAAACAAGTGTGCAATGTGGAG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACGGACCAGGCTGGGTTTaGAAGCTAGGGATGGAGGAA +
Preference number: 5 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNGPGWV*KLGMEE
Trigger: TTCCTCCATCCCTAGCTTCAAAACCCAGCCTGGTCC...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp AGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCTGAACTTGGAGAGCTaGGCCTTGGCTCTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: SATRRPQFFLHRGNLPFLLNLES*ALALAG
Trigger: GCCTGCCAGAGCCAAGGCCAAGCTCTCCAAGTTCAG...GAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCTTGGGGATGCTGAACTaGGAGAGCTTGGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGLGMLN*ESLALA
Trigger: AGCCAAGGCCAAGCTCTCCAAGTTCAGCATCCCCAA...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGTATTCGATGTGCCATaGTCTGGACTCTCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAVFDVP*SGLSGS
Trigger: AGAGCCAGAGAGTCCAGACAATGGCACATCGAATAC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp GGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCACGTATTCGATGTGCCATaGTCTGGACTCTCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: GGLRTLTIMAEGEGEARHVFDVP*SGLSGS
Trigger: AGAGCCAGAGAGTCCAGACAATGGCACATCGAATAC...GTGCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CAA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCAACCGAGGTTCTGCAGTaGGGCTGCTGGACCACGGCG +
Preference number: 5 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSTEVLQ*GCWTTA
Trigger: CGCCGTGGTCCAGCAGCCCAACTGCAGAACCTCGGT...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTTACTCCCAGGGGCCTaGTTGGCTGTCCTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLLPGA*LAVLGL
Trigger: AAGGCCAAGGACAGCCAACAAGGCCCCTGGGAGTAA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAATGGCTCGCTCTGTTGTaGCCACAGGGCCTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQWLALL*PQGLVL
Trigger: CAAAACCAGGCCCTGTGGCAACAACAGAGCGAGCCA...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCTGGCTCGCTCTGTTGTaGCCACAGGGCCTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETWLALL*PQGLVL
Trigger: CAAAACCAGGCCCTGTGGCAACAACAGAGCGAGCCA...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTCGGTGGCTCGCTCTGTaGTTGCCACAGGGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTRWLAL*LPQGLV
Trigger: AACCAGGCCCTGTGGCAACAACAGAGCGAGCCACCG...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCGAGGAGCGCAGCTCCTaGCGGTGGCTCGCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIEERSS*RWLALL
Trigger: CAACAGAGCGAGCCACCGCAAGGAGCTGCGCTCCTC...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGTCTCAATGAACTCCTaGGATTTGGGGACGATCCTG +
Preference number: 5 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAVSMNS*DLGTIL
Trigger: CAGGATCGTCCCCAAATCCAAGGAGTTCATTGAGAC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATTGCTCCTCCAGCTCCTaGGCGATGTCACTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYCSSSS*AMSLVV
Trigger: GACCACCAGTGACATCGCCAAGGAGCTGGAGGAGCA...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGGAAGTAAACAAACTGTaGCCATTAGGTCGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQEVNKL*PLGRLE
Trigger: TTCCAGCCGACCTAATGGCAACAGTTTGTTTACTTC...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGCAGTCCCTGTGGCCGTaGGAGCCTGGAGACCACGGC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLQSLWP*EPGDHG
Trigger: GCCGTGGTCTCCAGGCTCCAACGGCCACAGGGACTG...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAGTGATGCTGACGTGGTaGGCCGCCATCTGGTGGATG +
Preference number: 5 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKVMLTW*AAIWWM
Trigger: CATCCACCAGATGGCGGCCAACCACGTCAGCATCAC...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACCCACCGCATTCCAGCTaGGGCTACAGAGCCAGACCC +
Preference number: 5 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNPPHSS*GYRARP
Trigger: GGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGG...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCTACTGCACTTCCAAGTaGATGCGAACACGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLYCTSK*MRTRSD
Trigger: GTCACTGCGTGTTCGCATCAACTTGGAAGTGCAGTA...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAGAGAGCCCTGTTGTGTaGCTCTCTGTTGGCCGTCAG +
Preference number: 5 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKESPVV*LSVGRQ
Trigger: CTGACGGCCAACAGAGAGCAACACAACAGGGCTCTC...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAACCTGAGAGAGCCCTGTaGTGTTGCTCTCTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKPERAL*CCSLLA
Trigger: GGCCAACAGAGAGCAACACAACAGGGCTCTCTCAGG...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTACATTGCACACTTGTTaGGCCCGAGGCTGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTTLHTC*ARGCCL
Trigger: CAGACAGCAGCCTCGGGCCAAACAAGTGTGCAATGT...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp CTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGCTCCACATTGCACACTaGTTTGGCCCGAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LGDHSSSCTEETFHFSTTLHIAH*FGPRLL
Trigger: CAGCAGCCTCGGGCCAAACAAGTGTGCAATGTGGAG...CGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGTTGGAGAGCTTGGCCTaGGCTCTGGCAGGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQLESLA*ALAGSG
Trigger: GCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCAA...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACCTGAACTTGGAGAGCTaGGCCTTGGCTCTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNLNLES*ALALAG
Trigger: GCCTGCCAGAGCCAAGGCCAAGCTCTCCAAGTTCAG...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCACCGAGGTTCTGCAGTaGGGCTGCTGGACCACGGCG +
Preference number: 5 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSTEVLQ*GCWTTA
Trigger: CGCCGTGGTCCAGCAGCCCAACTGCAGAACCTCGGT...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAGGCCTTTGCTCCTCCTaGCAAGTGCTCTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEGLCSS*QVLLIS
Trigger: GGAGATCAAGAGCACTTGCAAGGAGGAGCAAAGGCC...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGACTCCCAGGGGCCTTGTaGGCTGTCCTTGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: VRESALSWQIALSLVSEGLPGAL*AVLGLC
Trigger: GCAAAGGCCAAGGACAGCCAACAAGGCCCCTGGGAG...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCCGGTGGCTCGCTCTGTaGTTGCCACAGGGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIRWLAL*LPQGLV
Trigger: AACCAGGCCCTGTGGCAACAACAGAGCGAGCCACCG...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGCCACGGTCTGTGCTTaGGACAGAGGGTACTCCTCC +
Preference number: 5 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNATVCA*DRGYSS
Trigger: GGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGGC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGTCTTCGTTGTCACACTaGCGTTTCCTCTTGGATTTT +
Preference number: 5 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQSSLSH*RFLLDF
Trigger: AAAATCCAAGAGGAAACGCAAGTGTGACAACGAAGA...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGGTATTGCCACACTGTaGATGTTCATGTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLGIATL*MFMLQW
Trigger: CCACTGCAACATGAACATCAACAGTGTGGCAATACC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACCAGTCCCTGTGGCCGTaGGAGCCTGGAGACCACGGC +
Preference number: 5 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDQSLWP*EPGDHG
Trigger: GCCGTGGTCTCCAGGCTCCAACGGCCACAGGGACTG...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCACAAGTTTCTGCCTCTaGCAGTCCCTGTGGCCGTTG +
Preference number: 5 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETTSFCL*QSLWPL
Trigger: CAACGGCCACAGGGACTGCAAGAGGCAGAAACTTGT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCAATGCAGCCAGTTGTTaGTCTTCTGGTGTGGCATTG +
Preference number: 5 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLANAASC*SSGVAL
Trigger: CAATGCCACACCAGAAGACAAACAACTGGCTGCATT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCACAGCGTGGTCCCTTTaGAGTCGAAACATCCGCCAG +
Preference number: 5 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETTAWSL*SRNIRQ
Trigger: CTGGCGGATGTTTCGACTCAAAAGGGACCACGCTGT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGCATGGGGAGTGGTCTTaGGGCTTTTCTCAAAGGAGT +
Preference number: 5 (lower is better)
Translates to: GTGMRKQVISTIPAVGSRHGEWS*GFSQRS
Trigger: ACTCCTTTGAGAAAAGCCCAAAGACCACTCCCCATG...CCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp ATTCCTTCCCAGGAGCATCCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCCTCCACAACGTTTGCTaGATCCTACTTGACTCCAGG +
Preference number: 5 (lower is better)
Translates to: IPSQEHPGRVPLGDHSSSLHNVC*ILLDSR
Trigger: CCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAG...GGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGGATGCTCCTGGGAAGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS TCA 90 bp GTCCTGGACGTCCTCTTTCACCGGGTTGTAGTACTGATTGCTCTCTaGCCCGTGGCTTTCATTTTGGATCAGAATAGGAGGCTTGTGGGG +
Preference number: 5 (lower is better)
Translates to: VLDVLFHRVVVLIAL*PVAFILDQNRRLVG
Trigger: CCCCACAAGCCTCCTATTCTGATCCAAAATGAAAGCCACGGGTCAGAGAGCAATCAGTACTACAACCCGGTGAAAGAGGACGTCCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS TCA 90 bp TGTCGACTTCAAACTTGCCGCCCGTCTCCGGTCTGGAAAGGCAGGTaGTCAGCTAGAAGGGTGATAAGAGTATCATCGTGGCTCCTAAAG +
Preference number: 5 (lower is better)
Translates to: CRLQTCRPSPVWKGR*SARRVIRVSSWLLK
Trigger: CTTTAGGAGCCACGATGATACTCTTATCACCCTTCTAGCTGATCACCTGCCTTTCCAGACCGGAGACGGGCGGCAAGTTTGAAGTCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672197.1
CDS-3UTR CAA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAGTGTCGACTTCAAACTaGCCGCCCGTCTCCGGTCTG +
Preference number: 5 (lower is better)
Translates to: VRESALSWQIALSLVSEGVSTSN*PPVSGL
Trigger: CAGACCGGAGACGGGCGGCAAGTTTGAAGTCGACAC...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317233.8
ENST00000672756.2
CDS-3UTR CAA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAACATTGCACACTTGTTaGGCCCGAGGCTGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKTLHTC*ARGCCL
Trigger: CAGACAGCAGCCTCGGGCCAAACAAGTGTGCAATGT...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp CTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGACATTGCACACTTGTTaGGCCCGAGGCTGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: LGDHSSSCTEETFHFSTTTLHTC*ARGCCL
Trigger: CAGACAGCAGCCTCGGGCCAAACAAGTGTGCAATGT...CGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTCTCCACATTGCACACTaGTTTGGCCCGAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTLHIAH*FGPRLL
Trigger: CAGCAGCCTCGGGCCAAACAAGTGTGCAATGTGGAG...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCTCTTCAACACAGCTGTaGGTTTCTCCAGATCTACTC +
Preference number: 5 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLSSTQL*VSPDLL
Trigger: GAGTAGATCTGGAGAAACCAACAGCTGTGTTGAAGA...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGGTCATCTTCCAGCATaGATGTATTCGATGTGCCAT +
Preference number: 5 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLGHLPA*MYSMCH
Trigger: ATGGCACATCGAATACATCAATGCTGGAAGATGACC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGATTATCCAGCTGCCACTaGTTAGAGGATGCCGGTTCA +
Preference number: 5 (lower is better)
Translates to: QSADKTLLAHLSNGASQGLSSCH*LEDAGS
Trigger: TGAACCGGCATCCTCTAACAAGTGGCAGCTGGATAA...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGCCTTTGCTCCTCCTaGCAAGTGCTCTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNGLCSS*QVLLIS
Trigger: GGAGATCAAGAGCACTTGCAAGGAGGAGCAAAGGCC...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTGGCTGTCCTTGGCCTTaGCTCCTCCTTGCAAGTGCT +
Preference number: 5 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPGCPWP*LLLASA
Trigger: AGCACTTGCAAGGAGGAGCAAAGGCCAAGGACAGCC...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTCCCAGGGGCCTTGTaGGCTGTCCTTGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSLPGAL*AVLGLC
Trigger: GCAAAGGCCAAGGACAGCCAACAAGGCCCCTGGGAG...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTTGGCTCGCTCTGTTGTaGCCACAGGGCCTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTWLALL*PQGLVL
Trigger: CAAAACCAGGCCCTGTGGCAACAACAGAGCGAGCCA...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCGGTGGCTCGCTCTGTaGTTGCCACAGGGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSRWLAL*LPQGLV
Trigger: AACCAGGCCCTGTGGCAACAACAGAGCGAGCCACCG...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAGAGGAGCGCAGCTCCTaGCGGTGGCTCGCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKEERSS*RWLALL
Trigger: CAACAGAGCGAGCCACCGCAAGGAGCTGCGCTCCTC...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGAGGAGCGCAGCTCCTaGCGGTGGCTCGCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDEERSS*RWLALL
Trigger: CAACAGAGCGAGCCACCGCAAGGAGCTGCGCTCCTC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCTCCTCGCTGGTGTATTaGTGTTTAGATGCATCAGAG +
Preference number: 5 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLASSLVY*CLDASE
Trigger: CTCTGATGCATCTAAACACAAATACACCAGCGAGGA...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATACAGCGTGGTCCCTTTaGAGTCGAAACATCCGCCAG +
Preference number: 5 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNTAWSL*SRNIRQ
Trigger: CTGGCGGATGTTTCGACTCAAAAGGGACCACGCTGT...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATACAGCGTGGTCCCTTTaGAGTCGAAACATCCGCCAG +
Preference number: 5 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYTAWSL*SRNIRQ
Trigger: CTGGCGGATGTTTCGACTCAAAAGGGACCACGCTGT...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAGTGATGCTGACGTGGTaGGCCGCCATCTGGTGGATG +
Preference number: 5 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVVMLTW*AAIWWM
Trigger: CATCCACCAGATGGCGGCCAACCACGTCAGCATCAC...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAATTCTCGGTTTTCCTaGGCCAGGTTGTCGGCCATC +
Preference number: 5 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETNSRFS*ARLSAI
Trigger: GATGGCCGACAACCTGGCCAAGGAAAACCGAGAATT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGACTGGCAGTCAAGCTTTaGGTGTGCTGTATTGCACCT +
Preference number: 5 (lower is better)
Translates to: QSADKTLLAHLSNGASQGLAVKL*VCCIAP
Trigger: AGGTGCAATACAGCACACCAAAAGCTTGACTGCCAG...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCCACCGCATTCCAGCTaGGGCTACAGAGCCAGACCC +
Preference number: 5 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSPPHSS*GYRARP
Trigger: GGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGG...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGCCACCGCATTCCAGCTaGGGCTACAGAGCCAGACCC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLPPHSS*GYRARP
Trigger: GGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGG...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CACTTTGCCAGGTGCTTGAATAGCAGAAAGTGGTGGAAGCCAGGTCATCTCCTGATGCACACAGACAAGTaGGCTGCCTTCTACCAGCTC +
Preference number: 5 (lower is better)
Translates to: HFARCLNSRKWWKPGHLLMHTDK*AAFYQL
Trigger: GAGCTGGTAGAAGGCAGCCAACTTGTCTGTGTGCAT...CAGGAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS TCA 90 bp AGGTGGCCAGTCTTGAAGAGCTGTCTTTCTCTCCCTGGGACTTCTTaGTCTCCCTGTAGTCGTCTTCGTTGTCACACTTGCGTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: RWPVLKSCLSLPGTS*SPCSRLRCHTCVSS
Trigger: AGAGGAAACGCAAGTGTGACAACGAAGACGACTACAGGGAGATCAAGAAGTCCCAGGGAGAGAAAGACAGCTCTTCAAGACTGGCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS GCA 90 bp ACCTGGAGTGAGGCGCTCCTTGTCTCTAGCCTCAACGTCTTCCTTTaGAACATGAGAAGGCTGGATTGGGTGTTCTTTGTCTCTGTCAGT +
Preference number: 5 (lower is better)
Translates to: TWSEALLVSSLNVFL*NMRRLDWVFFVSVS
Trigger: ACTGACAGAGACAAAGAACACCCAATCCAGCCTTCTCATGTTGCAAAGGAAGACGTTGAGGCTAGAGACAAGGAGCGCCTCACTCCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483600.1
CDS-3UTR CAA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTGTGTCGACTTCAAACTaGCCGCCCGTCTCCGGTCTG +
Preference number: 5 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIVSTSN*PPVSGL
Trigger: CAGACCGGAGACGGGCGGCAAGTTTGAAGTCGACAC...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317233.8
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCCCTGAGAGAGCCCTGTaGTGTTGCTCTCTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIPERAL*CCSLLA
Trigger: GGCCAACAGAGAGCAACACAACAGGGCTCTCTCAGG...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGGACCAGGCTGGGTTTaGAAGCTAGGGATGGAGGAA +
Preference number: 5 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNGPGWV*KLGMEE
Trigger: TTCCTCCATCCCTAGCTTCAAAACCCAGCCTGGTCC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp GAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTGGGACCAGGCTGGGTTTaGAAGCTAGGGATGGAGGAA +
Preference number: 5 (lower is better)
Translates to: ETTVLPAQRKPSISPQRLGPGWV*KLGMEE
Trigger: TTCCTCCATCCCTAGCTTCAAAACCCAGCCTGGTCC...CAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGGATCTTGGCCGTCCATaGGCCTCACATACGCGGTCG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLDLGRP*ASHTRS
Trigger: CGACCGCGTATGTGAGGCCAATGGACGGCCAAGATC...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGGATCTTGGCCGTCCATaGGCCTCACATACGCGGTCG +
Preference number: 5 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQDLGRP*ASHTRS
Trigger: CGACCGCGTATGTGAGGCCAATGGACGGCCAAGATC...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTTTGGAGAGCTTGGCCTaGGCTCTGGCAGGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: FQMLEGQSQMQIPQALLILESLA*ALAGSG
Trigger: GCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCAA...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp CTCACAGTTCCACATGGCTGGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTCATCTTCCAGCATaGATGTATTCGATGTGCCAT +
Preference number: 5 (lower is better)
Translates to: LTVPHGWGGLRTLTIMAEGHLPA*MYSMCH
Trigger: ATGGCACATCGAATACATCAATGCTGGAAGATGACC...TTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCCAGCCATGTGGAACTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CAA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAATTATCCAGCTGCCACTaGTTAGAGGATGCCGGTTCA +
Preference number: 5 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQLSSCH*LEDAGS
Trigger: TGAACCGGCATCCTCTAACAAGTGGCAGCTGGATAA...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCCTTGCAAGTGCTCTaGATCTCCTTCTCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHSLQVL*ISFSLR
Trigger: CCTGAGAGAGAAGGAGATCAAGAGCACTTGCAAGGA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCCGCCTGGTGGGCTTCTaGCCCGCGGACCTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: YINTESNQQYKSRSIFTGRLVGF*PADLRA
Trigger: TGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGCG...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGAGGAGCGCAGCTCCTaGCGGTGGCTCGCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIEERSS*RWLALL
Trigger: CAACAGAGCGAGCCACCGCAAGGAGCTGCGCTCCTC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTTGCTCCTCCAGCTCCTaGGCGATGTCACTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVCSSSS*AMSLVV
Trigger: GACCACCAGTGACATCGCCAAGGAGCTGGAGGAGCA...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGCGCTCTCAGAGTCCTaGGTGGCAGGGGCGCTCAAT +
Preference number: 5 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDALSES*VAGALN
Trigger: ATTGAGCGCCCCTGCCACCAAGGACTCTGAGAGCGC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCAATGCAGCCAGTTGTTaGTCTTCTGGTGTGGCATTG +
Preference number: 5 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGNAASC*SSGVAL
Trigger: CAATGCCACACCAGAAGACAAACAACTGGCTGCATT...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACCAGTGCAGGCCCTGTaGGGAGTACTGGACCAGGTG +
Preference number: 5 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKPVQAL*GVLDQV
Trigger: CACCTGGTCCAGTACTCCCAACAGGGCCTGCACTGG...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAACAGTGTCCAAAAACGTaGAGCCATCTGTGGAGACCA +
Preference number: 5 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQQCPKT*SHLWRP
Trigger: TGGTCTCCACAGATGGCTCAACGTTTTTGGACACTG...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCTGGCAGTCAAGCTTTaGGTGTGCTGTATTGCACCT +
Preference number: 5 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLAVKL*VCCIAP
Trigger: AGGTGCAATACAGCACACCAAAAGCTTGACTGCCAG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCAGTCAAGCTTTaGGTGTGCTGTATTGCACCT +
Preference number: 5 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTLAVKL*VCCIAP
Trigger: AGGTGCAATACAGCACACCAAAAGCTTGACTGCCAG...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGGAAGAGCAGGGTATTaGGTAACATGCAATCTAGTA +
Preference number: 5 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLGRAGY*VTCNLV
Trigger: TACTAGATTGCATGTTACCAAATACCCTGCTCTTCC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAATACTGCACTTCCAAGTaGATGCGAACACGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEYCTSK*MRTRSD
Trigger: GTCACTGCGTGTTCGCATCAACTTGGAAGTGCAGTA...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAGCCAGTTACTCCGGATaGATGCTTCCCGATGTAAAC +
Preference number: 5 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEASYSG*MLPDVN
Trigger: GTTTACATCGGGAAGCATCAATCCGGAGTAACTGGC...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672756.2
CDS-3UTR CAA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACTTCTGCTTCTTTAGTTaGGGGAGGAGGATAAGGAAA +
Preference number: 5 (lower is better)
Translates to: QTHRTQEEALVAAAPERNFCFFS*GRRIRK
Trigger: TTTCCTTATCCTCCTCCCCAAACTAAAGAAGCAGAA...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp AGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCGAGCGCAGGCTCAGTTaGCACAGCATTACTGAAGCA +
Preference number: 5 (lower is better)
Translates to: SATRRPQFFLHRGNLPFLERRLS*HSITEA
Trigger: TGCTTCAGTAATGCTGTGCAAACTGAGCCTGCGCTC...GAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTTGTGTTGCTCTCTGTaGGCCGTCAGAGGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLLCCSL*AVRGWV
Trigger: CACCCACCCTCTGACGGCCAACAGAGAGCAACACAA...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCCTGAGAGAGCCCTGTaGTGTTGCTCTCTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSPERAL*CCSLLA
Trigger: GGCCAACAGAGAGCAACACAACAGGGCTCTCTCAGG...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACATTGCACACTTGTTaGGCCCGAGGCTGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLITLHTC*ARGCCL
Trigger: CAGACAGCAGCCTCGGGCCAAACAAGTGTGCAATGT...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACCTGAACTTGGAGAGCTaGGCCTTGGCTCTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDLNLES*ALALAG
Trigger: GCCTGCCAGAGCCAAGGCCAAGCTCTCCAAGTTCAG...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp GAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCACGTTTGGAAATGGAAATTaGGTTGGTTCCACTTTGCCA +
Preference number: 5 (lower is better)
Translates to: EASGHLQSWRKVKGKQGTFGNGN*VGSTLP
Trigger: TGGCAAAGTGGAACCAACCAAATTTCCATTTCCAAA...CGTGCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCGGCCTTTGCTCCTCCTaGCAAGTGCTCTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIGLCSS*QVLLIS
Trigger: GGAGATCAAGAGCACTTGCAAGGAGGAGCAAAGGCC...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCGGCTGTCCTTGGCCTTaGCTCCTCCTTGCAAGTGCT +
Preference number: 5 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSGCPWP*LLLASA
Trigger: AGCACTTGCAAGGAGGAGCAAAGGCCAAGGACAGCC...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAACTCCCAGGGGCCTTGTaGGCTGTCCTTGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKLPGAL*AVLGLC
Trigger: GCAAAGGCCAAGGACAGCCAACAAGGCCCCTGGGAG...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTCTCCCAGGGGCCTTGTaGGCTGTCCTTGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLLPGAL*AVLGLC
Trigger: GCAAAGGCCAAGGACAGCCAACAAGGCCCCTGGGAG...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTTACTCCCAGGGGCCTaGTTGGCTGTCCTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLLLPGA*LAVLGL
Trigger: AAGGCCAAGGACAGCCAACAAGGCCCCTGGGAGTAA...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCCGGTGGCTCGCTCTGTaGTTGCCACAGGGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCRWLAL*LPQGLV
Trigger: AACCAGGCCCTGTGGCAACAACAGAGCGAGCCACCG...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGAGGAGCGCAGCTCCTaGCGGTGGCTCGCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSEERSS*RWLALL
Trigger: CAACAGAGCGAGCCACCGCAAGGAGCTGCGCTCCTC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAATGAACTCCTTGGATTaGGGGACGATCCTGCTTAGC +
Preference number: 5 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKMNSLD*GTILLS
Trigger: GCTAAGCAGGATCGTCCCCAAATCCAAGGAGTTCAT...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGATGAACTCCTTGGATTaGGGGACGATCCTGCTTAGC +
Preference number: 5 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRMNSLD*GTILLS
Trigger: GCTAAGCAGGATCGTCCCCAAATCCAAGGAGTTCAT...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGCCACGGTCTGTGCTTaGGACAGAGGGTACTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDATVCA*DRGYSS
Trigger: GGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGGC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAGCGCTCTCAGAGTCCTaGGTGGCAGGGGCGCTCAAT +
Preference number: 5 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKALSES*VAGALN
Trigger: ATTGAGCGCCCCTGCCACCAAGGACTCTGAGAGCGC...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGTATTGCCACACTGTaGATGTTCATGTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQGIATL*MFMLQW
Trigger: CCACTGCAACATGAACATCAACAGTGTGGCAATACC...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGGTATTGCCACACTGTaGATGTTCATGTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTGIATL*MFMLQW
Trigger: CCACTGCAACATGAACATCAACAGTGTGGCAATACC...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTAATTCTCGGTTTTCCTaGGCCAGGTTGTCGGCCATC +
Preference number: 5 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPNSRFS*ARLSAI
Trigger: GATGGCCGACAACCTGGCCAAGGAAAACCGAGAATT...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTAACTGTGAGCAGTGGTaGTCTCAGGCAGAAGGGACA +
Preference number: 5 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPNCEQW*SQAEGT
Trigger: TGTCCCTTCTGCCTGAGACAACCACTGCTCACAGTT...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGAAAGTCTCATTGCATaGCATTCCATGTGTTCAATC +
Preference number: 5 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAESLIA*HSMCSI
Trigger: GATTGAACACATGGAATGCAATGCAATGAGACTTTC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATTACTGCACTTCCAAGTaGATGCGAACACGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNYCTSK*MRTRSD
Trigger: GTCACTGCGTGTTCGCATCAACTTGGAAGTGCAGTA...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATTTCTCAAGCTTCCTGTaGAGCCTTCACTGGGACACT +
Preference number: 5 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNFSSFL*SLHWDT
Trigger: AGTGTCCCAGTGAAGGCTCAACAGGAAGCTTGAGAA...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS TCA 90 bp GTGAGGCGCTCCTTGTCTCTAGCCTCAACGTCTTCCTTTGCAACATaGGAAGGCTGGATTGGGTGTTCTTTGTCTCTGTCAGTTTTTGTC +
Preference number: 5 (lower is better)
Translates to: VRRSLSLASTSSFAT*EGWIGCSLSLSVFV
Trigger: GACAAAAACTGACAGAGACAAAGAACACCCAATCCAGCCTTCTCATGTTGCAAAGGAAGACGTTGAGGCTAGAGACAAGGAGCGCCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483600.1
CDS-3UTR CAA 90 bp TTTCAAACAAGCCAACTTCCTAATTACAATGGAGAGGGAACTGGCATGAGGAAGTTGTGTTGCTCTCTGTaGGCCGTCAGAGGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: FQTSQLPNYNGEGTGMRKLCCSL*AVRGWV
Trigger: CACCCACCCTCTGACGGCCAACAGAGAGCAACACAA...CTTCCTCATGCCAGTTCCCTCTCCATTGTAATTAGGAAGTTGGCTTGTTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp TTTCAAACAAGCCAACTTCCTAATTACAATGGAGAGGGAACTGGCATGAGGAAGGAGAGCCCTGTTGTGTaGCTCTCTGTTGGCCGTCAG +
Preference number: 5 (lower is better)
Translates to: FQTSQLPNYNGEGTGMRKESPVV*LSVGRQ
Trigger: CTGACGGCCAACAGAGAGCAACACAACAGGGCTCTC...CTTCCTCATGCCAGTTCCCTCTCCATTGTAATTAGGAAGTTGGCTTGTTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTGATCTTGGCCGTCCATaGGCCTCACATACGCGGTCG +
Preference number: 5 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLDLGRP*ASHTRS
Trigger: CGACCGCGTATGTGAGGCCAATGGACGGCCAAGATC...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTCTGAACTTGGAGAGCTaGGCCTTGGCTCTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLLNLES*ALALAG
Trigger: GCCTGCCAGAGCCAAGGCCAAGCTCTCCAAGTTCAG...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp AAGGGGAAGCAAGGCACGTCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGTCTTCAACACAGCTGTaGGTTTCTCCAGATCTACTC +
Preference number: 5 (lower is better)
Translates to: KGKQGTSCRRSDVAENTGSSTQL*VSPDLL
Trigger: GAGTAGATCTGGAGAAACCAACAGCTGTGTTGAAGA...CCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGACGTGCCTTGCTTCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CAA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACTCTTCAACACAGCTGTaGGTTTCTCCAGATCTACTC +
Preference number: 5 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHSSTQL*VSPDLL
Trigger: GAGTAGATCTGGAGAAACCAACAGCTGTGTTGAAGA...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp GGGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGTTTGGAAATGGAAATTaGGTTGGTTCCACTTTGCCA +
Preference number: 5 (lower is better)
Translates to: GNWHEEASYFHHSGSGLQFGNGN*VGSTLP
Trigger: TGGCAAAGTGGAACCAACCAAATTTCCATTTCCAAA...CTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTATCCTTGCAAGTGCTCTaGATCTCCTTCTCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLSLQVL*ISFSLR
Trigger: CCTGAGAGAGAAGGAGATCAAGAGCACTTGCAAGGA...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACTCCTTGCAAGTGCTCTaGATCTCCTTCTCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNSLQVL*ISFSLR
Trigger: CCTGAGAGAGAAGGAGATCAAGAGCACTTGCAAGGA...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACATGAACTCCTTGGATTaGGGGACGATCCTGCTTAGC +
Preference number: 5 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNMNSLD*GTILLS
Trigger: GCTAAGCAGGATCGTCCCCAAATCCAAGGAGTTCAT...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAAGGGTCAGGTCGATTTaGACCCAGAGAGACCTGATC +
Preference number: 5 (lower is better)
Translates to: VRESALSWQIALSLVSEGRVRSI*TQRDLI
Trigger: GATCAGGTCTCTCTGGGTCAAAATCGACCTGACCCT...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGCGCTCTCAGAGTCCTaGGTGGCAGGGGCGCTCAAT +
Preference number: 5 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSALSES*VAGALN
Trigger: ATTGAGCGCCCCTGCCACCAAGGACTCTGAGAGCGC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAACACTTGCGTTTCCTCTaGGATTTTGGCAAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQHLRFL*DFGKAF
Trigger: AAAGGCTTTGCCAAAATCCAAGAGGAAACGCAAGTG...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCCACTTGCGTTTCCTCTaGGATTTTGGCAAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETHLRFL*DFGKAF
Trigger: AAAGGCTTTGCCAAAATCCAAGAGGAAACGCAAGTG...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCACTTGCGTTTCCTCTaGGATTTTGGCAAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTHLRFL*DFGKAF
Trigger: AAAGGCTTTGCCAAAATCCAAGAGGAAACGCAAGTG...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTATCGGCCTTAGGCTTTTaGCTGGAAGAGGCTGAAGTA +
Preference number: 5 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLSALGF*LEEAEV
Trigger: TACTTCAGCCTCTTCCAGCAAAAAGCCTAAGGCCGA...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTCAGTCCCTGTGGCCGTaGGAGCCTGGAGACCACGGC +
Preference number: 5 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIQSLWP*EPGDHG
Trigger: GCCGTGGTCTCCAGGCTCCAACGGCCACAGGGACTG...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCACAAGTTTCTGCCTCTaGCAGTCCCTGTGGCCGTTG +
Preference number: 5 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSTSFCL*QSLWPL
Trigger: CAACGGCCACAGGGACTGCAAGAGGCAGAAACTTGT...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGACAAGTTTCTGCCTCTaGCAGTCCCTGTGGCCGTTG +
Preference number: 5 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQTSFCL*QSLWPL
Trigger: CAACGGCCACAGGGACTGCAAGAGGCAGAAACTTGT...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGAATGCAGCCAGTTGTTaGTCTTCTGGTGTGGCATTG +
Preference number: 5 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRNAASC*SSGVAL
Trigger: CAATGCCACACCAGAAGACAAACAACTGGCTGCATT...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCACAGCGTGGTCCCTTTaGAGTCGAAACATCCGCCAG +
Preference number: 5 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSTAWSL*SRNIRQ
Trigger: CTGGCGGATGTTTCGACTCAAAAGGGACCACGCTGT...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTACAGCGTGGTCCCTTTaGAGTCGAAACATCCGCCAG +
Preference number: 5 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIITAWSL*SRNIRQ
Trigger: CTGGCGGATGTTTCGACTCAAAAGGGACCACGCTGT...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAGTGATGCTGACGTGGTaGGCCGCCATCTGGTGGATG +
Preference number: 5 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAVMLTW*AAIWWM
Trigger: CATCCACCAGATGGCGGCCAACCACGTCAGCATCAC...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAAATTCTCGGTTTTCCTaGGCCAGGTTGTCGGCCATC +
Preference number: 5 (lower is better)
Translates to: VRESALSWQIALSLVSEGNSRFS*ARLSAI
Trigger: GATGGCCGACAACCTGGCCAAGGAAAACCGAGAATT...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATAGCAGATCCAGGTCGTaGAAGAATTCTCGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYSRSRS*KNSRFS
Trigger: GGAAAACCGAGAATTCTTCAACGACCTGGATCTGCT...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTACAGTGTCCAAAAACGTaGAGCCATCTGTGGAGACCA +
Preference number: 5 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLQCPKT*SHLWRP
Trigger: TGGTCTCCACAGATGGCTCAACGTTTTTGGACACTG...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAAACCTCTGATCACTTaGTCTAGCCTGGGATTATGG +
Preference number: 5 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETKPLIT*SSLGLW
Trigger: CCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTAAACCTCTGATCACTTaGTCTAGCCTGGGATTATGG +
Preference number: 5 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTKPLIT*SSLGLW
Trigger: CCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTT...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTAAAGACGCCGCGTTTTaGCTAAATCTCAGTGCCATT +
Preference number: 5 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTKDAAF*LNLSAI
Trigger: AATGGCACTGAGATTTAGCAAAAACGCGGCGTCTTT...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAAACTGTGAGCAGTGGTaGTCTCAGGCAGAAGGGACA +
Preference number: 5 (lower is better)
Translates to: VRESALSWQIALSLVSEGNCEQW*SQAEGT
Trigger: TGTCCCTTCTGCCTGAGACAACCACTGCTCACAGTT...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATAACTGTGAGCAGTGGTaGTCTCAGGCAGAAGGGACA +
Preference number: 5 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHNCEQW*SQAEGT
Trigger: TGTCCCTTCTGCCTGAGACAACCACTGCTCACAGTT...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCGTGCAGAAAGTCTCATaGCATTGCATTCCATGTGTT +
Preference number: 5 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGVQKVS*HCIPCV
Trigger: AACACATGGAATGCAATGCAATGAGACTTTCTGCAC...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACTATCAAGCTCAGTGGTaGGTGAAGCAAAGCCAAGTT +
Preference number: 5 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHYQAQW*VKQSQV
Trigger: AACTTGGCTTTGCTTCACCAACCACTGAGCTTGATA...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAACAGAAGAGAACGTTCTaGAAAGACTGCTGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQQKRTF*KDCWVF
Trigger: AAACACCCAGCAGTCTTTCAAGAACGTTCTCTTCTG...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS CCA 90 bp ACAGCTGCTGGTGTGGAAGTTGTAGTGCTACAGATAGACGAGGGCTaGTTCTGGGCTCTTGAATCTGCAACAAAATGTTCATCGATCTTG +
Preference number: 5 (lower is better)
Translates to: TAAGVEVVVLQIDEG*FWALESATKCSSIL
Trigger: CAAGATCGATGAACATTTTGTTGCAGATTCAAGAGCCCAGAACCAGCCCTCGTCTATCTGTAGCACTACAACTTCCACACCAGCAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000423966.6
ENST00000432037.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS CCA 90 bp TGTGAGGAGTTCCAGATAACTGCTCAGGTCTTTAAGAGAATTCCTTaGTCTTCATACTCCACTCCCAGCTCTCAGCTCCCGTTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: CEEFQITAQVFKRIP*SSYSTPSSQLPFLF
Trigger: GAAAAGGAACGGGAGCTGAGAGCTGGGAGTGGAGTATGAAGACCAAGGAATTCTCTTAAAGACCTGAGCAGTTATCTGGAACTCCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672822.1
ENST00000683540.1
CDS-3UTR CAA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAGTGTTCTGGATCCGGTaGGAGAGTTCATCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKVFWIR*ESSSPL
Trigger: CAAGGGGGATGAACTCTCCAACCGGATCCAGAACAC...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCTTGTGTTGCTCTCTGTaGGCCGTCAGAGGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCLCCSL*AVRGWV
Trigger: CACCCACCCTCTGACGGCCAACAGAGAGCAACACAA...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATTGTGTTGCTCTCTGTaGGCCGTCAGAGGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKLCCSL*AVRGWV
Trigger: CACCCACCCTCTGACGGCCAACAGAGAGCAACACAA...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTGAGAGCCCTGTTGTGTaGCTCTCTGTTGGCCGTCAG +
Preference number: 5 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLESPVV*LSVGRQ
Trigger: CTGACGGCCAACAGAGAGCAACACAACAGGGCTCTC...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAGAGAGCCCTGTTGTGTaGCTCTCTGTTGGCCGTCAG +
Preference number: 5 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKESPVV*LSVGRQ
Trigger: CTGACGGCCAACAGAGAGCAACACAACAGGGCTCTC...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTTTGGAGAGCTTGGCCTaGGCTCTGGCAGGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLILESLA*ALAGSG
Trigger: GCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCAA...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAATTGGGGATGCTGAACTaGGAGAGCTTGGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKLGMLN*ESLALA
Trigger: AGCCAAGGCCAAGCTCTCCAAGTTCAGCATCCCCAA...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAATCTTCAACACAGCTGTaGGTTTCTCCAGATCTACTC +
Preference number: 5 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKSSTQL*VSPDLL
Trigger: GAGTAGATCTGGAGAAACCAACAGCTGTGTTGAAGA...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAACTGCATCACCTTTCTTaGGATTATTGTGTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKLHHLS*DYCVQR
Trigger: CCTCTGGACACAATAATCCAAAGAAAGGTGATGCAG...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATTCCTTGCAAGTGCTCTaGATCTCCTTCTCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHSLQVL*ISFSLR
Trigger: CCTGAGAGAGAAGGAGATCAAGAGCACTTGCAAGGA...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGGCTGTCCTTGGCCTTaGCTCCTCCTTGCAAGTGCT +
Preference number: 5 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIGCPWP*LLLASA
Trigger: AGCACTTGCAAGGAGGAGCAAAGGCCAAGGACAGCC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAGGCTGTCCTTGGCCTTaGCTCCTCCTTGCAAGTGCT +
Preference number: 5 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKGCPWP*LLLASA
Trigger: AGCACTTGCAAGGAGGAGCAAAGGCCAAGGACAGCC...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAACACTTGCGTTTCCTCTaGGATTTTGGCAAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKHLRFL*DFGKAF
Trigger: AAAGGCTTTGCCAAAATCCAAGAGGAAACGCAAGTG...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTTCGTTGTCACACTaGCGTTTCCTCTTGGATTTT +
Preference number: 5 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHSSLSH*RFLLDF
Trigger: AAAATCCAAGAGGAAACGCAAGTGTGACAACGAAGA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCTGTTGATGTTCATGTaGCAGTGGTTTGCAGACAAA +
Preference number: 5 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLLMFM*QWFADK
Trigger: TTTGTCTGCAAACCACTGCAACATGAACATCAACAG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAACAAGTTTCTGCCTCTaGCAGTCCCTGTGGCCGTTG +
Preference number: 5 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKTSFCL*QSLWPL
Trigger: CAACGGCCACAGGGACTGCAAGAGGCAGAAACTTGT...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCGGATTCCATGGGGCCTaGTTCCATTGCATTTCCACA +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIGFHGA*FHCIST
Trigger: TGTGGAAATGCAATGGAACAAGGCCCCATGGAATCC...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAACAGCGTGGTCCCTTTaGAGTCGAAACATCCGCCAG +
Preference number: 5 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKTAWSL*SRNIRQ
Trigger: CTGGCGGATGTTTCGACTCAAAAGGGACCACGCTGT...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTAAGCAGATCCAGGTCGTaGAAGAATTCTCGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLSRSRS*KNSRFS
Trigger: GGAAAACCGAGAATTCTTCAACGACCTGGATCTGCT...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCCCCTGCAAAAGATCATaGTTCAATGCTGAGGAAATG +
Preference number: 5 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETPCKRS*FNAEEM
Trigger: CATTTCCTCAGCATTGAACAATGATCTTTTGCAGGG...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGAAACCTCTGATCACTTaGTCTAGCCTGGGATTATGG +
Preference number: 5 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRKPLIT*SSLGLW
Trigger: CCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTT...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCAATATTTCCAAATGCTaGAAGGCCAAAGCCAAATGC +
Preference number: 5 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGNISKC*KAKAKC
Trigger: GCATTTGGCTTTGGCCTTCAAGCATTTGGAAATATT...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCATGATTCCACCATGTaGGTTTCAGTTGTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRHDSTM*VSVVCS
Trigger: ACTGCACACAACTGAAACCAACATGGTGGAATCATG...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS TCA 90 bp GGAAGTTGTAGTGCTACAGATAGACGAGGGCTGGTTCTGGGCTCTTaGATCTGCAACAAAATGTTCATCGATCTTGTTCACAGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: GSCSATDRRGLVLGS*ICNKMFIDLVHRSL
Trigger: CAGACTCCTGTGAACAAGATCGATGAACATTTTGTTGCAGATTCAAGAGCCCAGAACCAGCCCTCGTCTATCTGTAGCACTACAACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000423966.6
ENST00000432037.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS CCA 90 bp GCTGGTGTGGAAGTTGTAGTGCTACAGATAGACGAGGGCTGGTTCTaGGCTCTTGAATCTGCAACAAAATGTTCATCGATCTTGTTCACA +
Preference number: 5 (lower is better)
Translates to: AGVEVVVLQIDEGWF*ALESATKCSSILFT
Trigger: TGTGAACAAGATCGATGAACATTTTGTTGCAGATTCAAGAGCCCAGAACCAGCCCTCGTCTATCTGTAGCACTACAACTTCCACACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000423966.6
ENST00000432037.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGTGTTCTGGATCCGGTaGGAGAGTTCATCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIVFWIR*ESSSPL
Trigger: CAAGGGGGATGAACTCTCCAACCGGATCCAGAACAC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCGAGAGCCCTGTTGTGTaGCTCTCTGTTGGCCGTCAG +
Preference number: 5 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCESPVV*LSVGRQ
Trigger: CTGACGGCCAACAGAGAGCAACACAACAGGGCTCTC...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGGACCAGGCTGGGTTTaGAAGCTAGGGATGGAGGAA +
Preference number: 5 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIGPGWV*KLGMEE
Trigger: TTCCTCCATCCCTAGCTTCAAAACCCAGCCTGGTCC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACTCTTCAACACAGCTGTaGGTTTCTCCAGATCTACTC +
Preference number: 5 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNSSTQL*VSPDLL
Trigger: GAGTAGATCTGGAGAAACCAACAGCTGTGTTGAAGA...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTTTGGAAATGGAAATTaGGTTGGTTCCACTTTGCCA +
Preference number: 5 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHFGNGN*VGSTLP
Trigger: TGGCAAAGTGGAACCAACCAAATTTCCATTTCCAAA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp GGCACGTCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGTTTCAATGGTCACTGCATCACCTTTCTTaGGATTATTGTGTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: GTSCRRSDVAENTGFQWSLHHLS*DYCVQR
Trigger: CCTCTGGACACAATAATCCAAAGAAAGGTGATGCAG...TGACCATTGAAACCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGACGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCTTATCCAGCTGCCACTaGTTAGAGGATGCCGGTTCA +
Preference number: 5 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSLSSCH*LEDAGS
Trigger: TGAACCGGCATCCTCTAACAAGTGGCAGCTGGATAA...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCGGCCTTTGCTCCTCCTaGCAAGTGCTCTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCGLCSS*QVLLIS
Trigger: GGAGATCAAGAGCACTTGCAAGGAGGAGCAAAGGCC...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCGTCTCAATGAACTCCTaGGATTTGGGGACGATCCTG +
Preference number: 5 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSVSMNS*DLGTIL
Trigger: CAGGATCGTCCCCAAATCCAAGGAGTTCATTGAGAC...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTGCTCCTCCAGCTCCTaGGCGATGTCACTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYCSSSS*AMSLVV
Trigger: GACCACCAGTGACATCGCCAAGGAGCTGGAGGAGCA...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAAGGGTCAGGTCGATTTaGACCCAGAGAGACCTGATC +
Preference number: 5 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKRVRSI*TQRDLI
Trigger: GATCAGGTCTCTCTGGGTCAAAATCGACCTGACCCT...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCGCGCTCTCAGAGTCCTaGGTGGCAGGGGCGCTCAAT +
Preference number: 5 (lower is better)
Translates to: YINTESNQQYKSRSIFTGALSES*VAGALN
Trigger: ATTGAGCGCCCCTGCCACCAAGGACTCTGAGAGCGC...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTACACTTGCGTTTCCTCTaGGATTTTGGCAAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLHLRFL*DFGKAF
Trigger: AAAGGCTTTGCCAAAATCCAAGAGGAAACGCAAGTG...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCTGTTGATGTTCATGTaGCAGTGGTTTGCAGACAAA +
Preference number: 5 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRLLMFM*QWFADK
Trigger: TTTGTCTGCAAACCACTGCAACATGAACATCAACAG...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTTCGGCCTTAGGCTTTTaGCTGGAAGAGGCTGAAGTA +
Preference number: 5 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVSALGF*LEEAEV
Trigger: TACTTCAGCCTCTTCCAGCAAAAAGCCTAAGGCCGA...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAGTCTGCGGCCGTGACTaGTGGAGGGGAATGTTTTCA +
Preference number: 5 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKVCGRD*WRGMFS
Trigger: TGAAAACATTCCCCTCCACAAGTCACGGCCGCAGAC...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTGTCTGCGGCCGTGACTaGTGGAGGGGAATGTTTTCA +
Preference number: 5 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLVCGRD*WRGMFS
Trigger: TGAAAACATTCCCCTCCACAAGTCACGGCCGCAGAC...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGACATTCGTTTAGCTTCTaGCATAAAATAATCGGCACT +
Preference number: 5 (lower is better)
Translates to: QSADKTLLAHLSNGASQGHSFSF*HKIIGT
Trigger: AGTGCCGATTATTTTATGCAAGAAGCTAAACGAATG...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGGTGATGCTGACGTGGTaGGCCGCCATCTGGTGGATG +
Preference number: 5 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMVMLTW*AAIWWM
Trigger: CATCCACCAGATGGCGGCCAACCACGTCAGCATCAC...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCAGCAGATCCAGGTCGTaGAAGAATTCTCGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLISRSRS*KNSRFS
Trigger: GGAAAACCGAGAATTCTTCAACGACCTGGATCTGCT...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTCTGGCAGTCAAGCTTTaGGTGTGCTGTATTGCACCT +
Preference number: 5 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVLAVKL*VCCIAP
Trigger: AGGTGCAATACAGCACACCAAAAGCTTGACTGCCAG...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCATGTGGCTGGTGGGCTaGTTATCACAGGTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSMWLVG*LSQVQK
Trigger: TTTCTGCACCTGTGATAACAAGCCCACCAGCCACAT...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGTCCCAGGGCTACTGGTaGAACAGGAACCCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMSQGYW*NRNPVA
Trigger: GGCCACAGGGTTCCTGTTCAACCAGTAGCCCTGGGA...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCTTTCAAGATTCCACTaGATCCGGGTTTCTTCGAAA +
Preference number: 5 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYLSRFH*IRVSSK
Trigger: TTTCGAAGAAACCCGGATCAAGTGGAATCTTGAAAG...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS GCA 90 bp ACGCTATTGTTAGAGACAACAGAAACACCGGAGATAATCAACAGGTaGCCTTATCAATCACAGAGCCAGGGTTGTCACATGCAGAATGAG +
Preference number: 5 (lower is better)
Translates to: TLLLETTETPEIINR*PYQSQSQGCHMQNE
Trigger: CTCATTCTGCATGTGACAACCCTGGCTCTGTGATTGATAAGGGCACCTGTTGATTATCTCCGGTGTTTCTGTTGTCTCTAACAATAGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498090.1
CDS-3UTR CAA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCACTCCACATTGCACACTaGTTTGGCCCGAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: MRISFSAESLIALHSMCSLHIAH*FGPRLL
Trigger: CAGCAGCCTCGGGCCAAACAAGTGTGCAATGTGGAG...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATCTCCACATTGCACACTaGTTTGGCCCGAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYLHIAH*FGPRLL
Trigger: CAGCAGCCTCGGGCCAAACAAGTGTGCAATGTGGAG...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGTTTGGAAATGGAAATTaGGTTGGTTCCACTTTGCCA +
Preference number: 5 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRFGNGN*VGSTLP
Trigger: TGGCAAAGTGGAACCAACCAAATTTCCATTTCCAAA...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATTTTGGAAATGGAAATTaGGTTGGTTCCACTTTGCCA +
Preference number: 5 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNFGNGN*VGSTLP
Trigger: TGGCAAAGTGGAACCAACCAAATTTCCATTTCCAAA...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAGTCTCAATGAACTCCTaGGATTTGGGGACGATCCTG +
Preference number: 5 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKVSMNS*DLGTIL
Trigger: CAGGATCGTCCCCAAATCCAAGGAGTTCATTGAGAC...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTGCCACGGTCTGTGCTTaGGACAGAGGGTACTCCTCC +
Preference number: 5 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIATVCA*DRGYSS
Trigger: GGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGGC...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTTGCTCCTCCAGCTCCTaGGCGATGTCACTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: RISVNVYGSASSLSILCRCSSSS*AMSLVV
Trigger: GACCACCAGTGACATCGCCAAGGAGCTGGAGGAGCA...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATTCCTCGCTGGTGTATTaGTGTTTAGATGCATCAGAG +
Preference number: 5 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHSSLVY*CLDASE
Trigger: CTCTGATGCATCTAAACACAAATACACCAGCGAGGA...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAATCGGCCTTAGGCTTTTaGCTGGAAGAGGCTGAAGTA +
Preference number: 5 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKSALGF*LEEAEV
Trigger: TACTTCAGCCTCTTCCAGCAAAAAGCCTAAGGCCGA...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGTCTGCGGCCGTGACTaGTGGAGGGGAATGTTTTCA +
Preference number: 5 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSVCGRD*WRGMFS
Trigger: TGAAAACATTCCCCTCCACAAGTCACGGCCGCAGAC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGGATTCCATGGGGCCTaGTTCCATTGCATTTCCACA +
Preference number: 5 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDGFHGA*FHCIST
Trigger: TGTGGAAATGCAATGGAACAAGGCCCCATGGAATCC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAGTCGATTAGTGCTTTaGAATACTTTACAGCGTGGT +
Preference number: 5 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKSRLVL*NTLQRG
Trigger: ACCACGCTGTAAAGTATTCAAAAGCACTAATCGACT...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCAATTCTCGGTTTTCCTaGGCCAGGTTGTCGGCCATC +
Preference number: 5 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCNSRFS*ARLSAI
Trigger: GATGGCCGACAACCTGGCCAAGGAAAACCGAGAATT...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGAGCAGATCCAGGTCGTaGAAGAATTCTCGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLSRSRS*KNSRFS
Trigger: GGAAAACCGAGAATTCTTCAACGACCTGGATCTGCT...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAAACCTCTGATCACTTaGTCTAGCCTGGGATTATGG +
Preference number: 5 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVKPLIT*SSLGLW
Trigger: CCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTT...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCAAAGACGCCGCGTTTTaGCTAAATCTCAGTGCCATT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIKDAAF*LNLSAI
Trigger: AATGGCACTGAGATTTAGCAAAAACGCGGCGTCTTT...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGAATATTTCCAAATGCTaGAAGGCCAAAGCCAAATGC +
Preference number: 5 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRNISKC*KAKAKC
Trigger: GCATTTGGCTTTGGCCTTCAAGCATTTGGAAATATT...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACAAAGACAAAGGATATTaGAATCTAAGGACATGGGCT +
Preference number: 5 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHKDKGY*NLRTWA
Trigger: AGCCCATGTCCTTAGATTCAAATATCCTTTGTCTTT...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS TCA 90 bp CCTTATCAATCACAGAGCCAGGGTTGTCACATGCAGAATGAGAGCTaGGAGATGAAATCGAAATCCTTATCGTCTCTGAAGATGTCTGTC +
Preference number: 5 (lower is better)
Translates to: PYQSQSQGCHMQNES*EMKSKSLSSLKMSV
Trigger: GACAGACATCTTCAGAGACGATAAGGATTTCGATTTCATCTCTCAGCTCTCATTCTGCATGTGACAACCCTGGCTCTGTGATTGATAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498090.1
CDS CCA 90 bp TTAAAGGTAGGACCTCCTTCTTGGCTTAAACAAATCTCAAGGTGTTaGTCTGCTTCAAACAGGAGTGCTGTGCTATCTGCTAGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: LKVGPPSWLKQISRC*SASNRSAVLSASSQ
Trigger: CTGAGAACTAGCAGATAGCACAGCACTCCTGTTTGAAGCAGACCAACACCTTGAGATTTGTTTAAGCCAAGAAGGAGGTCCTACCTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483600.1
CDS-3UTR CAA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATGTGTTCTGGATCCGGTaGGAGAGTTCATCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYVFWIR*ESSSPL
Trigger: CAAGGGGGATGAACTCTCCAACCGGATCCAGAACAC...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTCCTGAGAGAGCCCTGTaGTGTTGCTCTCTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: RISVNVYGSASSLSILCRPERAL*CCSLLA
Trigger: GGCCAACAGAGAGCAACACAACAGGGCTCTCTCAGG...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGTATTCGATGTGCCATaGTCTGGACTCTCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIVFDVP*SGLSGS
Trigger: AGAGCCAGAGAGTCCAGACAATGGCACATCGAATAC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCGGTCATCTTCCAGCATaGATGTATTCGATGTGCCAT +
Preference number: 5 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSGHLPA*MYSMCH
Trigger: ATGGCACATCGAATACATCAATGCTGGAAGATGACC...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATTATCCAGCTGCCACTaGTTAGAGGATGCCGGTTCA +
Preference number: 5 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKLSSCH*LEDAGS
Trigger: TGAACCGGCATCCTCTAACAAGTGGCAGCTGGATAA...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGTTACTCCCAGGGGCCTaGTTGGCTGTCCTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQLLPGA*LAVLGL
Trigger: AAGGCCAAGGACAGCCAACAAGGCCCCTGGGAGTAA...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTTTACTCCCAGGGGCCTaGTTGGCTGTCCTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: RISVNVYGSASSLSILCRLLPGA*LAVLGL
Trigger: AAGGCCAAGGACAGCCAACAAGGCCCCTGGGAGTAA...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAGTCTCAATGAACTCCTaGGATTTGGGGACGATCCTG +
Preference number: 5 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAVSMNS*DLGTIL
Trigger: CAGGATCGTCCCCAAATCCAAGGAGTTCATTGAGAC...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAAGGGTCAGGTCGATTTaGACCCAGAGAGACCTGATC +
Preference number: 5 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSRVRSI*TQRDLI
Trigger: GATCAGGTCTCTCTGGGTCAAAATCGACCTGACCCT...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTCACTTGCGTTTCCTCTaGGATTTTGGCAAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIHLRFL*DFGKAF
Trigger: AAAGGCTTTGCCAAAATCCAAGAGGAAACGCAAGTG...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCTCATGTTGCAGTGGTTaGCAGACAAAGTATTACTGG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLISCCSG*QTKYYW
Trigger: CCAGTAATACTTTGTCTGCAAACCACTGCAACATGA...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTACTGTTGATGTTCATGTaGCAGTGGTTTGCAGACAAA +
Preference number: 5 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVLLMFM*QWFADK
Trigger: TTTGTCTGCAAACCACTGCAACATGAACATCAACAG...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCCTCGCTGGTGTATTaGTGTTTAGATGCATCAGAG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLSSLVY*CLDASE
Trigger: CTCTGATGCATCTAAACACAAATACACCAGCGAGGA...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTGAAGTAAACAAACTGTaGCCATTAGGTCGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIEVNKL*PLGRLE
Trigger: TTCCAGCCGACCTAATGGCAACAGTTTGTTTACTTC...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCAAACTTTTCCACCATaGCATCTGCTTTATGCTTCA +
Preference number: 5 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPQTFPP*HLLYAS
Trigger: TGAAGCATAAAGCAGATGCAATGGTGGAAAAGTTTG...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAGGATTCCATGGGGCCTaGTTCCATTGCATTTCCACA +
Preference number: 5 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKGFHGA*FHCIST
Trigger: TGTGGAAATGCAATGGAACAAGGCCCCATGGAATCC...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCACAGTGTCCAAAAACGTaGAGCCATCTGTGGAGACCA +
Preference number: 5 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAQCPKT*SHLWRP
Trigger: TGGTCTCCACAGATGGCTCAACGTTTTTGGACACTG...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGACCCTGCAAAAGATCATaGTTCAATGCTGAGGAAATG +
Preference number: 5 (lower is better)
Translates to: VRESALSWQIALSLVSEGPCKRS*FNAEEM
Trigger: CATTTCCTCAGCATTGAACAATGATCTTTTGCAGGG...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTAAATCTCAGTGCCATTaGCATACTACTTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIKSQCH*HTTWRW
Trigger: CCACCTCCAAGTAGTATGCAAATGGCACTGAGATTT...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAATGTGGCTGGTGGGCTaGTTATCACAGGTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAMWLVG*LSQVQK
Trigger: TTTCTGCACCTGTGATAACAAGCCCACCAGCCACAT...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATGTGGCTGGTGGGCTaGTTATCACAGGTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLMWLVG*LSQVQK
Trigger: TTTCTGCACCTGTGATAACAAGCCCACCAGCCACAT...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACTCTAGTCTAAGTATTTaGTGCCGTCATCACCTTGAA +
Preference number: 5 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNSSLSI*CRHHLE
Trigger: TTCAAGGTGATGACGGCACAAAATACTTAGACTAGA...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAAACTGTGAGCAGTGGTaGTCTCAGGCAGAAGGGACA +
Preference number: 5 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSNCEQW*SQAEGT
Trigger: TGTCCCTTCTGCCTGAGACAACCACTGCTCACAGTT...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTTTCTCAAGCTTCCTGTaGAGCCTTCACTGGGACACT +
Preference number: 5 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLFSSFL*SLHWDT
Trigger: AGTGTCCCAGTGAAGGCTCAACAGGAAGCTTGAGAA...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGCAGAAGAGAACGTTCTaGAAAGACTGCTGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQQKRTF*KDCWVF
Trigger: AAACACCCAGCAGTCTTTCAAGAACGTTCTCTTCTG...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCAGGAAGTTGTAATATaGAAAAACTGTGCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRQEVVI*KNCALL
Trigger: CAGAAGAGCACAGTTTTTCAATATTACAACTTCCTG...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS GCA 90 bp GTTCTTTCCTCCGTAATGCATTTCTATCTGGTTCATAGACACTCCTaGATCTGCTGGCTGATGACTGAAATTCCACAACTAGAGAGTCAT +
Preference number: 5 (lower is better)
Translates to: VLSSVMHFYLVHRHS*ICWLMTEIPQLESH
Trigger: ATGACTCTCTAGTTGTGGAATTTCAGTCATCAGCCAGCAGATGCAGGAGTGTCTATGAACCAGATAGAAATGCATTACGGAGGAAAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000409579.5
ENST00000423966.6
ENST00000440445.6
ENST00000672047.1
ENST00000672197.1
ENST00000672269.1
ENST00000673232.1
ENST00000673328.1
CDS CCA 90 bp AATGTTCATCGATCTTGTTCACAGGAGTCTGAGGAACCCCAGGTTTaGGAACTCCAACGAGATGACTCTGATTGGATCTATCAGTTAAAA +
Preference number: 5 (lower is better)
Translates to: NVHRSCSQESEEPQV*ELQRDDSDWIYQLK
Trigger: TTTTAACTGATAGATCCAATCAGAGTCATCTCGTTGGAGTTCCCAAACCTGGGGTTCCTCAGACTCCTGTGAACAAGATCGATGAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000423966.6
ENST00000424600.5
ENST00000432037.5
ENST00000441400.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
ENST00000673328.1
CDS-3UTR CAA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTGTGTTCTGGATCCGGTaGGAGAGTTCATCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIVFWIR*ESSSPL
Trigger: CAAGGGGGATGAACTCTCCAACCGGATCCAGAACAC...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCGGACCAGGCTGGGTTTaGAAGCTAGGGATGGAGGAA +
Preference number: 5 (lower is better)
Translates to: YINTESNQQYKSRSIFTGGPGWV*KLGMEE
Trigger: TTCCTCCATCCCTAGCTTCAAAACCCAGCCTGGTCC...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTTTGGGGATGCTGAACTaGGAGAGCTTGGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: RISVNVYGSASSLSILCRLGMLN*ESLALA
Trigger: AGCCAAGGCCAAGCTCTCCAAGTTCAGCATCCCCAA...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp GCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGAATATTTACAGAAGATCTTCAACACAGCTGTaGGTTTCTCCAGATCTACTC +
Preference number: 5 (lower is better)
Translates to: ANCEGSDSRASGRNIYRRSSTQL*VSPDLL
Trigger: GAGTAGATCTGGAGAAACCAACAGCTGTGTTGAAGA...TCTTCTGTAAATATTCCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CAA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGTATTCGATGTGCCATaGTCTGGACTCTCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSVFDVP*SGLSGS
Trigger: AGAGCCAGAGAGTCCAGACAATGGCACATCGAATAC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAGGTCATCTTCCAGCATaGATGTATTCGATGTGCCAT +
Preference number: 5 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKGHLPA*MYSMCH
Trigger: ATGGCACATCGAATACATCAATGCTGGAAGATGACC...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAATGAACTCCTTGGATTaGGGGACGATCCTGCTTAGC +
Preference number: 5 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSMNSLD*GTILLS
Trigger: GCTAAGCAGGATCGTCCCCAAATCCAAGGAGTTCAT...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CAA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTGGTATTGCCACACTGTaGATGTTCATGTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLGIATL*MFMLQW
Trigger: CCACTGCAACATGAACATCAACAGTGTGGCAATACC...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAGGTATTGCCACACTGTaGATGTTCATGTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKGIATL*MFMLQW
Trigger: CCACTGCAACATGAACATCAACAGTGTGGCAATACC...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACTCCTCGCTGGTGTATTaGTGTTTAGATGCATCAGAG +
Preference number: 5 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDSSLVY*CLDASE
Trigger: CTCTGATGCATCTAAACACAAATACACCAGCGAGGA...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGAAGTAAACAAACTGTaGCCATTAGGTCGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDEVNKL*PLGRLE
Trigger: TTCCAGCCGACCTAATGGCAACAGTTTGTTTACTTC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGGTCTGCGGCCGTGACTaGTGGAGGGGAATGTTTTCA +
Preference number: 5 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQVCGRD*WRGMFS
Trigger: TGAAAACATTCCCCTCCACAAGTCACGGCCGCAGAC...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGACAAACTTTTCCACCATaGCATCTGCTTTATGCTTCA +
Preference number: 5 (lower is better)
Translates to: VRESALSWQIALSLVSEGQTFPP*HLLYAS
Trigger: TGAAGCATAAAGCAGATGCAATGGTGGAAAAGTTTG...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCCAAACTTTTCCACCATaGCATCTGCTTTATGCTTCA +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIQTFPP*HLLYAS
Trigger: TGAAGCATAAAGCAGATGCAATGGTGGAAAAGTTTG...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGGATTCCATGGGGCCTaGTTCCATTGCATTTCCACA +
Preference number: 5 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSGFHGA*FHCIST
Trigger: TGTGGAAATGCAATGGAACAAGGCCCCATGGAATCC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAAATGCAGCCAGTTGTTaGTCTTCTGGTGTGGCATTG +
Preference number: 5 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKNAASC*SSGVAL
Trigger: CAATGCCACACCAGAAGACAAACAACTGGCTGCATT...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACAAACCTCTGATCACTTaGTCTAGCCTGGGATTATGG +
Preference number: 5 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDKPLIT*SSLGLW
Trigger: CCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTT...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTGGAAGAGCAGGGTATTaGGTAACATGCAATCTAGTA +
Preference number: 5 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIGRAGY*VTCNLV
Trigger: TACTAGATTGCATGTTACCAAATACCCTGCTCTTCC...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGGAAGAGCAGGGTATTaGGTAACATGCAATCTAGTA +
Preference number: 5 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVGRAGY*VTCNLV
Trigger: TACTAGATTGCATGTTACCAAATACCCTGCTCTTCC...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCATGTGGCTGGTGGGCTaGTTATCACAGGTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCMWLVG*LSQVQK
Trigger: TTTCTGCACCTGTGATAACAAGCCCACCAGCCACAT...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATTCTAGTCTAAGTATTTaGTGCCGTCATCACCTTGAA +
Preference number: 5 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHSSLSI*CRHHLE
Trigger: TTCAAGGTGATGACGGCACAAAATACTTAGACTAGA...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCATCTAGTCTAAGTATTTaGTGCCGTCATCACCTTGAA +
Preference number: 5 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSSSLSI*CRHHLE
Trigger: TTCAAGGTGATGACGGCACAAAATACTTAGACTAGA...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTACTCTTTCAAAGGCAATaGAACATCGTGATAAAGGAT +
Preference number: 5 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLLFQRQ*NIVIKD
Trigger: ATCCTTTATCACGATGTTCAATTGCCTTTGAAAGAG...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACAAAGACAAAGGATATTaGAATCTAAGGACATGGGCT +
Preference number: 5 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNKDKGY*NLRTWA
Trigger: AGCCCATGTCCTTAGATTCAAATATCCTTTGTCTTT...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCACTGCATCACCTTTCTTaGGATTATTGTGTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRALHHLS*DYCVQR
Trigger: CCTCTGGACACAATAATCCAAAGAAAGGTGATGCAG...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCCTGCATCACCTTTCTTaGGATTATTGTGTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCLHHLS*DYCVQR
Trigger: CCTCTGGACACAATAATCCAAAGAAAGGTGATGCAG...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTCTGCATCACCTTTCTTaGGATTATTGTGTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLLHHLS*DYCVQR
Trigger: CCTCTGGACACAATAATCCAAAGAAAGGTGATGCAG...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAATCATGTTGCAGTGGTTaGCAGACAAAGTATTACTGG +
Preference number: 5 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKSCCSG*QTKYYW
Trigger: CCAGTAATACTTTGTCTGCAAACCACTGCAACATGA...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACCTGTTGATGTTCATGTaGCAGTGGTTTGCAGACAAA +
Preference number: 5 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDLLMFM*QWFADK
Trigger: TTTGTCTGCAAACCACTGCAACATGAACATCAACAG...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTTCCTCGCTGGTGTATTaGTGTTTAGATGCATCAGAG +
Preference number: 5 (lower is better)
Translates to: FQMLEGQSQMQIPQALLISSLVY*CLDASE
Trigger: CTCTGATGCATCTAAACACAAATACACCAGCGAGGA...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATCATTCGTTTAGCTTCTaGCATAAAATAATCGGCACT +
Preference number: 5 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHHSFSF*HKIIGT
Trigger: AGTGCCGATTATTTTATGCAAGAAGCTAAACGAATG...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATGGATTCCATGGGGCCTaGTTCCATTGCATTTCCACA +
Preference number: 5 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYGFHGA*FHCIST
Trigger: TGTGGAAATGCAATGGAACAAGGCCCCATGGAATCC...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAGGATTCCATGGGGCCTaGTTCCATTGCATTTCCACA +
Preference number: 5 (lower is better)
Translates to: MRISFSAESLIALHSMCSGFHGA*FHCIST
Trigger: TGTGGAAATGCAATGGAACAAGGCCCCATGGAATCC...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCAATGCAGCCAGTTGTTaGTCTTCTGGTGTGGCATTG +
Preference number: 5 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCNAASC*SSGVAL
Trigger: CAATGCCACACCAGAAGACAAACAACTGGCTGCATT...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTAGTCGATTAGTGCTTTaGAATACTTTACAGCGTGGT +
Preference number: 5 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVSRLVL*NTLQRG
Trigger: ACCACGCTGTAAAGTATTCAAAAGCACTAATCGACT...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTAATTCTCGGTTTTCCTaGGCCAGGTTGTCGGCCATC +
Preference number: 5 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLINSRFS*ARLSAI
Trigger: GATGGCCGACAACCTGGCCAAGGAAAACCGAGAATT...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATCAGTGTCCAAAAACGTaGAGCCATCTGTGGAGACCA +
Preference number: 5 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYQCPKT*SHLWRP
Trigger: TGGTCTCCACAGATGGCTCAACGTTTTTGGACACTG...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACCCTGCAAAAGATCATaGTTCAATGCTGAGGAAATG +
Preference number: 5 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKPCKRS*FNAEEM
Trigger: CATTTCCTCAGCATTGAACAATGATCTTTTGCAGGG...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGGAAGAGCAGGGTATTaGGTAACATGCAATCTAGTA +
Preference number: 5 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDGRAGY*VTCNLV
Trigger: TACTAGATTGCATGTTACCAAATACCCTGCTCTTCC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCAAATCTCAGTGCCATTaGCATACTACTTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCKSQCH*HTTWRW
Trigger: CCACCTCCAAGTAGTATGCAAATGGCACTGAGATTT...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATTCTGTAAGAAAGCTATaGGTGGAAAGAAAAGACTTG +
Preference number: 5 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHSVRKL*VERKDL
Trigger: CAAGTCTTTTCTTTCCACCAATAGCTTTCTTACAGA...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATCTGTAAGAAAGCTATaGGTGGAAAGAAAAGACTTG +
Preference number: 5 (lower is better)
Translates to: VRESALSWQIALSLVSEGSVRKL*VERKDL
Trigger: CAAGTCTTTTCTTTCCACCAATAGCTTTCTTACAGA...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGTCTAGTCTAAGTATTTaGTGCCGTCATCACCTTGAA +
Preference number: 5 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQSSLSI*CRHHLE
Trigger: TTCAAGGTGATGACGGCACAAAATACTTAGACTAGA...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGTGCAGAAAGTCTCATaGCATTGCATTCCATGTGTT +
Preference number: 5 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDVQKVS*HCIPCV
Trigger: AACACATGGAATGCAATGCAATGAGACTTTCTGCAC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTCTCCCCAGTAAGTCGTaGAACGTCTTTCTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: RISVNVYGSASSLSILCRLPSKS*NVFLLR
Trigger: CCTCAGAAGAAAGACGTTCAACGACTTACTGGGGAG...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317233.8
ENST00000672756.2
CDS-3UTR CAA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCGTATTCGATGTGCCATaGTCTGGACTCTCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: YINTESNQQYKSRSIFTGVFDVP*SGLSGS
Trigger: AGAGCCAGAGAGTCCAGACAATGGCACATCGAATAC...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGGTCATCTTCCAGCATaGATGTATTCGATGTGCCAT +
Preference number: 5 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSGHLPA*MYSMCH
Trigger: ATGGCACATCGAATACATCAATGCTGGAAGATGACC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CAA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTTCTTCGTTGTCACACTaGCGTTTCCTCTTGGATTTT +
Preference number: 5 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLSSLSH*RFLLDF
Trigger: AAAATCCAAGAGGAAACGCAAGTGTGACAACGAAGA...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGAAGTAAACAAACTGTaGCCATTAGGTCGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSEVNKL*PLGRLE
Trigger: TTCCAGCCGACCTAATGGCAACAGTTTGTTTACTTC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGTCGGCCTTAGGCTTTTaGCTGGAAGAGGCTGAAGTA +
Preference number: 5 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQSALGF*LEEAEV
Trigger: TACTTCAGCCTCTTCCAGCAAAAAGCCTAAGGCCGA...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCTCGGCCTTAGGCTTTTaGCTGGAAGAGGCTGAAGTA +
Preference number: 5 (lower is better)
Translates to: YINTESNQQYKSRSIFTGSALGF*LEEAEV
Trigger: TACTTCAGCCTCTTCCAGCAAAAAGCCTAAGGCCGA...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTCCCTGCAAAAGATCATaGTTCAATGCTGAGGAAATG +
Preference number: 5 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLPCKRS*FNAEEM
Trigger: CATTTCCTCAGCATTGAACAATGATCTTTTGCAGGG...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTCTTTCAAAGGCAATaGAACATCGTGATAAAGGAT +
Preference number: 5 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSLFQRQ*NIVIKD
Trigger: ATCCTTTATCACGATGTTCAATTGCCTTTGAAAGAG...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGCTCTTTCAAAGGCAATaGAACATCGTGATAAAGGAT +
Preference number: 5 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLLFQRQ*NIVIKD
Trigger: ATCCTTTATCACGATGTTCAATTGCCTTTGAAAGAG...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGAAAGTCTCATTGCATaGCATTCCATGTGTTCAATC +
Preference number: 5 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDESLIA*HSMCSI
Trigger: GATTGAACACATGGAATGCAATGCAATGAGACTTTC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGTACTGCACTTCCAAGTaGATGCGAACACGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQYCTSK*MRTRSD
Trigger: GTCACTGCGTGTTCGCATCAACTTGGAAGTGCAGTA...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCATATCAAGCTCAGTGGTaGGTGAAGCAAAGCCAAGTT +
Preference number: 5 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSYQAQW*VKQSQV
Trigger: AACTTGGCTTTGCTTCACCAACCACTGAGCTTGATA...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAACTTTCAAGATTCCACTaGATCCGGGTTTCTTCGAAA +
Preference number: 5 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKLSRFH*IRVSSK
Trigger: TTTCGAAGAAACCCGGATCAAGTGGAATCTTGAAAG...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACCATTCGTTTAGCTTCTaGCATAAAATAATCGGCACT +
Preference number: 5 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDHSFSF*HKIIGT
Trigger: AGTGCCGATTATTTTATGCAAGAAGCTAAACGAATG...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCACAAACTTTTCCACCATaGCATCTGCTTTATGCTTCA +
Preference number: 5 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAQTFPP*HLLYAS
Trigger: TGAAGCATAAAGCAGATGCAATGGTGGAAAAGTTTG...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTCAAACTTTTCCACCATaGCATCTGCTTTATGCTTCA +
Preference number: 5 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLQTFPP*HLLYAS
Trigger: TGAAGCATAAAGCAGATGCAATGGTGGAAAAGTTTG...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAAGTCGATTAGTGCTTTaGAATACTTTACAGCGTGGT +
Preference number: 5 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKSRLVL*NTLQRG
Trigger: ACCACGCTGTAAAGTATTCAAAAGCACTAATCGACT...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTAGTCGATTAGTGCTTTaGAATACTTTACAGCGTGGT +
Preference number: 5 (lower is better)
Translates to: FQMLEGQSQMQIPQALLISRLVL*NTLQRG
Trigger: ACCACGCTGTAAAGTATTCAAAAGCACTAATCGACT...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTAGCAGATCCAGGTCGTaGAAGAATTCTCGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: RISVNVYGSASSLSILCRSRSRS*KNSRFS
Trigger: GGAAAACCGAGAATTCTTCAACGACCTGGATCTGCT...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATAAATCTCAGTGCCATTaGCATACTACTTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYKSQCH*HTTWRW
Trigger: CCACCTCCAAGTAGTATGCAAATGGCACTGAGATTT...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCTTCTGCTTCTTTAGTTaGGGGAGGAGGATAAGGAAA +
Preference number: 5 (lower is better)
Translates to: PKPWADVISLRTEFIIFLFCFFS*GRRIRK
Trigger: TTTCCTTATCCTCCTCCCCAAACTAAAGAAGCAGAA...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCATCATGTTGCAGTGGTTaGCAGACAAAGTATTACTGG +
Preference number: 5 (lower is better)
Translates to: MRISFSAESLIALHSMCSSCCSG*QTKYYW
Trigger: CCAGTAATACTTTGTCTGCAAACCACTGCAACATGA...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTCATGTTGCAGTGGTTaGCAGACAAAGTATTACTGG +
Preference number: 5 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYSCCSG*QTKYYW
Trigger: CCAGTAATACTTTGTCTGCAAACCACTGCAACATGA...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGCCCTGCAAAAGATCATaGTTCAATGCTGAGGAAATG +
Preference number: 5 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMPCKRS*FNAEEM
Trigger: CATTTCCTCAGCATTGAACAATGATCTTTTGCAGGG...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTAAACCTCTGATCACTTaGTCTAGCCTGGGATTATGG +
Preference number: 5 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIKPLIT*SSLGLW
Trigger: CCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTT...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATGGAAGAGCAGGGTATTaGGTAACATGCAATCTAGTA +
Preference number: 5 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYGRAGY*VTCNLV
Trigger: TACTAGATTGCATGTTACCAAATACCCTGCTCTTCC...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCAAATCTCAGTGCCATTaGCATACTACTTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: YINTESNQQYKSRSIFTGKSQCH*HTTWRW
Trigger: CCACCTCCAAGTAGTATGCAAATGGCACTGAGATTT...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTAAAGACGCCGCGTTTTaGCTAAATCTCAGTGCCATT +
Preference number: 5 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIKDAAF*LNLSAI
Trigger: AATGGCACTGAGATTTAGCAAAAACGCGGCGTCTTT...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATCTGTAAGAAAGCTATaGGTGGAAAGAAAAGACTTG +
Preference number: 5 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKSVRKL*VERKDL
Trigger: CAAGTCTTTTCTTTCCACCAATAGCTTTCTTACAGA...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCAATATTTCCAAATGCTaGAAGGCCAAAGCCAAATGC +
Preference number: 5 (lower is better)
Translates to: PKPWADVISLRTEFIIFLNISKC*KAKAKC
Trigger: GCATTTGGCTTTGGCCTTCAAGCATTTGGAAATATT...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGAAAGTCTCATTGCATaGCATTCCATGTGTTCAATC +
Preference number: 5 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSESLIA*HSMCSI
Trigger: GATTGAACACATGGAATGCAATGCAATGAGACTTTC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCCAGGAAGTTGTAATATaGAAAAACTGTGCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCQEVVI*KNCALL
Trigger: CAGAAGAGCACAGTTTTTCAATATTACAACTTCCTG...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCATTTGGAAATGGAAATTaGGTTGGTTCCACTTTGCCA +
Preference number: 5 (lower is better)
Translates to: MRISFSAESLIALHSMCSFGNGN*VGSTLP
Trigger: TGGCAAAGTGGAACCAACCAAATTTCCATTTCCAAA...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CAA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTTCTTCGTTGTCACACTaGCGTTTCCTCTTGGATTTT +
Preference number: 5 (lower is better)
Translates to: RISVNVYGSASSLSILCRSSLSH*RFLLDF
Trigger: AAAATCCAAGAGGAAACGCAAGTGTGACAACGAAGA...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTTCTTCGTTGTCACACTaGCGTTTCCTCTTGGATTTT +
Preference number: 5 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLISSLSH*RFLLDF
Trigger: AAAATCCAAGAGGAAACGCAAGTGTGACAACGAAGA...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTTCATGTTGCAGTGGTTaGCAGACAAAGTATTACTGG +
Preference number: 5 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLISCCSG*QTKYYW
Trigger: CCAGTAATACTTTGTCTGCAAACCACTGCAACATGA...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGTCATGTTGCAGTGGTTaGCAGACAAAGTATTACTGG +
Preference number: 5 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQSCCSG*QTKYYW
Trigger: CCAGTAATACTTTGTCTGCAAACCACTGCAACATGA...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACATTCGTTTAGCTTCTaGCATAAAATAATCGGCACT +
Preference number: 5 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSHSFSF*HKIIGT
Trigger: AGTGCCGATTATTTTATGCAAGAAGCTAAACGAATG...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGAGTCGATTAGTGCTTTaGAATACTTTACAGCGTGGT +
Preference number: 5 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMSRLVL*NTLQRG
Trigger: ACCACGCTGTAAAGTATTCAAAAGCACTAATCGACT...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAGAAAGTCTCATTGCATaGCATTCCATGTGTTCAATC +
Preference number: 5 (lower is better)
Translates to: MRISFSAESLIALHSMCSESLIA*HSMCSI
Trigger: GATTGAACACATGGAATGCAATGCAATGAGACTTTC...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTGTGCAGAAAGTCTCATaGCATTGCATTCCATGTGTT +
Preference number: 5 (lower is better)
Translates to: RISVNVYGSASSLSILCRVQKVS*HCIPCV
Trigger: AACACATGGAATGCAATGCAATGAGACTTTCTGCAC...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTGTGCAGAAAGTCTCATaGCATTGCATTCCATGTGTT +
Preference number: 5 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIVQKVS*HCIPCV
Trigger: AACACATGGAATGCAATGCAATGAGACTTTCTGCAC...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCACATTCGTTTAGCTTCTaGCATAAAATAATCGGCACT +
Preference number: 5 (lower is better)
Translates to: MRISFSAESLIALHSMCSHSFSF*HKIIGT
Trigger: AGTGCCGATTATTTTATGCAAGAAGCTAAACGAATG...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGCAAACTTTTCCACCATaGCATCTGCTTTATGCTTCA +
Preference number: 5 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQQTFPP*HLLYAS
Trigger: TGAAGCATAAAGCAGATGCAATGGTGGAAAAGTTTG...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCATCTGTAAGAAAGCTATaGGTGGAAAGAAAAGACTTG +
Preference number: 5 (lower is better)
Translates to: MRISFSAESLIALHSMCSSVRKL*VERKDL
Trigger: CAAGTCTTTTCTTTCCACCAATAGCTTTCTTACAGA...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGCATTCGTTTAGCTTCTaGCATAAAATAATCGGCACT +
Preference number: 5 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQHSFSF*HKIIGT
Trigger: AGTGCCGATTATTTTATGCAAGAAGCTAAACGAATG...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CAA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTCTCTTTCAAAGGCAATaGAACATCGTGATAAAGGAT +
Preference number: 5 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLILFQRQ*NIVIKD
Trigger: ATCCTTTATCACGATGTTCAATTGCCTTTGAAAGAG...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS CAA 90 bp GTCCCCAGCGCGTCCGCGGCCGCGGGCTCCTCGGGCCGGTGGCAGTaGGCGCCGTCCCCGGCTGAGGTCCTCTCGGTGCGCCTGGTGGGC +
Preference number: 6 (lower is better)
Translates to: VPSASAAAGSSGRWQ*APSPAEVLSVRLVG
Trigger: GCCCACCAGGCGCACCGAGAGGACCTCAGCCGGGGACGGCGCCAACTGCCACCGGCCCGAGGAGCCCGCGGCCGCGGACGCGCTGGGGAC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS CAA 90 bp GCGCCGTCCCCGGCTGAGGTCCTCTCGGTGCGCCTGGTGGGCTTCTaGCCCGCGGACCTCCGGGCAGGCGCGGGCGCGTTCTCCGCGGGC +
Preference number: 6 (lower is better)
Translates to: APSPAEVLSVRLVGF*PADLRAGAGAFSAG
Trigger: GCCCGCGGAGAACGCGCCCGCGCCTGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGACCTCAGCCGGGGACGGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS CAA 90 bp CGAGGCTCGGGCCGCCCGCGCGTTCTCCCGCGGCCCAGAATCCACTaGACCCTGCTGGGCGCTCCCGCGGGCGGCGGACCCGGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: RGSGRPRVLPRPRIH*TLLGAPAGGGPGWV
Trigger: CACCCACCCGGGTCCGCCGCCCGCGGGAGCGCCCAGCAGGGTCAAGTGGATTCTGGGCCGCGGGAGAACGCGCGGGCGGCCCGAGCCTCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424600.5
CDS CCA 72 bp CGCCGTCCCCGGCTGAGGTCCTCTCGGTGCGCCTGGTaGGCTTCTTGCCCGCGGACCTCCGGGCAGGCGCGG +
Preference number: 6 (lower is better)
Translates to: RRPRLRSSRCAW*ASCPRTSGQAR
Trigger: CCGCGCCTGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGACCTCAGCCGGGGACGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS CCA 72 bp TGGCGCCGTCCCCGGCTGAGGTCCTCTCGGTGCGCCTaGTGGGCTTCTTGCCCGCGGACCTCCGGGCAGGCG +
Preference number: 6 (lower is better)
Translates to: WRRPRLRSSRCA*WASCPRTSGQA
Trigger: CGCCTGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGACCTCAGCCGGGGACGGCGCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS CAA 72 bp CCGGCTGAGGTCCTCTCGGTGCGCCTGGTGGGCTTCTaGCCCGCGGACCTCCGGGCAGGCGCGGGCGCGTTC +
Preference number: 6 (lower is better)
Translates to: PAEVLSVRLVGF*PADLRAGAGAF
Trigger: GAACGCGCCCGCGCCTGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGACCTCAGCCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 72 bp CGGCTGAGGTCCTCTCGGTGCGCCTGGTGGGCTTCTTaGCCGCGGACCTCCGGGCAGGCGCGGGCGCGTTCT +
Preference number: 6 (lower is better)
Translates to: RLRSSRCAWWAS*PRTSGQARARS
Trigger: AGAACGCGCCCGCGCCTGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGACCTCAGCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 72 bp GGCAGTTGGCGCCGTCCCCGGCTGAGGTCCTCTCGGTaGGCCTGGTGGGCTTCTTGCCCGCGGACCTCCGGG +
Preference number: 6 (lower is better)
Translates to: GSWRRPRLRSSR*AWWASCPRTSG
Trigger: CCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGACCTCAGCCGGGGACGGCGCCAACTGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS TCA 72 bp CTCCTCGGGCCGGTGGCAGTTGGCGCCGTCCCCGGCTaGGGTCCTCTCGGTGCGCCTGGTGGGCTTCTTGCC +
Preference number: 6 (lower is better)
Translates to: LLGPVAVGAVPG*GPLGAPGGLLA
Trigger: GGCAAGAAGCCCACCAGGCGCACCGAGAGGACCTCAGCCGGGGACGGCGCCAACTGCCACCGGCCCGAGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS CCA 72 bp GGCTCGGGCCGCCCGCGCGCGGGAAGGGGGACAAACTaGCCTCTGGGTGTCGACTTCAAACTTGCCGCCCGT +
Preference number: 6 (lower is better)
Translates to: GSGRPRAGRGTN*PLGVDFKLAAR
Trigger: ACGGGCGGCAAGTTTGAAGTCGACACCCAGAGGCCAGTTTGTCCCCCTTCCCGCGCGCGGGCGGCCCGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317233.8
ENST00000409579.5
ENST00000415384.2
ENST00000427118.1
ENST00000440445.6
ENST00000672197.1
ENST00000672204.1
ENST00000672756.2
ENST00000672857.1
CDS CCA 72 bp GCCGCCCGCGCGCGGGAAGGGGGACAAACTGGCCTCTaGGTGTCGACTTCAAACTTGCCGCCCGTCTCCGGT +
Preference number: 6 (lower is better)
Translates to: AARAREGGQTGL*VSTSNLPPVSG
Trigger: ACCGGAGACGGGCGGCAAGTTTGAAGTCGACACCCAGAGGCCAGTTTGTCCCCCTTCCCGCGCGCGGGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317233.8
ENST00000409579.5
ENST00000415384.2
ENST00000427118.1
ENST00000440445.6
ENST00000672197.1
ENST00000672204.1
ENST00000672756.2
ENST00000672857.1
CDS CCA 72 bp CCGAGGTGTGGCTGGGCGGTGCGCTCTCAGAGTCCTTaGTGGCAGGGGCGCTCAATACCCCTGGCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: PRCGWAVRSQSP*WQGRSIPLAPG
Trigger: CCCAGGAGCCAGGGGTATTGAGCGCCCCTGCCACCAAGGACTCTGAGAGCGCACCGCCCAGCCACACCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS TCA 72 bp CCACTGCCCCCGTTGGCAGCGGCCTCCTTCAGCCTCTaGTCATTCCCGGAGGAGGCAGAGGCAGCCACGGTC +
Preference number: 6 (lower is better)
Translates to: PLPPLAAASFSL*SFPEEAEAATV
Trigger: GACCGTGGCTGCCTCTGCCTCCTCCGGGAATGATCAGAGGCTGAAGGAGGCCGCTGCCAACGGGGGCAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS GCA 72 bp CGCTGGAGGAGCTGCTGCTGCCGCTGCTGCTGCTGCTaGTGCTGCCCTTGCTGGAAGGCACCGAGGTTCTGC +
Preference number: 6 (lower is better)
Translates to: RWRSCCCRCCCC*CCPCWKAPRFC
Trigger: GCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCTCCTCCAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 72 bp CTGAGTCGCTGGAGGAGCTGCTGCTGCCGCTGCTGCTaGTGCTGCTGCTGCCCTTGCTGGAAGGCACCGAGG +
Preference number: 6 (lower is better)
Translates to: LSRWRSCCCRCC*CCCCPCWKAPR
Trigger: CCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCTCCTCCAGCGACTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 72 bp GGCGCTTCTCGCAGGTCACGGAGGAGCGCAGCTCCTTaGGGTGGCTCGCTCTGTTGTTGCCACAGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: GASRRSRRSAAP*GGSLCCCHRAW
Trigger: CCAGGCCCTGTGGCAACAACAGAGCGAGCCACCGCAAGGAGCTGCGCTCCTCCGTGACCTGCGAGAAGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS CAA 72 bp TCCGAGGTGTGGCTGGGCGGTGCGCTCTCAGAGTCCTaGGTGGCAGGGGCGCTCAATACCCCTGGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: SEVWLGGALSES*VAGALNTPGSW
Trigger: CCAGGAGCCAGGGGTATTGAGCGCCCCTGCCACCAAGGACTCTGAGAGCGCACCGCCCAGCCACACCTCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS GCA 72 bp AGTCGCTGGAGGAGCTGCTGCTGCCGCTGCTGCTGCTaGTGCTGCTGCCCTTGCTGGAAGGCACCGAGGTTC +
Preference number: 6 (lower is better)
Translates to: SRWRSCCCRCCC*CCCPCWKAPRF
Trigger: GAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCTCCTCCAGCGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 72 bp CCTTGGATTTGGGGACGATCCTGCTTAGCCCCCGCGTaGGGCGCTTCTCGCAGGTCACGGAGGAGCGCAGCT +
Preference number: 6 (lower is better)
Translates to: PWIWGRSCLAPA*GASRRSRRSAA
Trigger: AGCTGCGCTCCTCCGTGACCTGCGAGAAGCGCCGCACGCGGGGGCTAAGCAGGATCGTCCCCAAATCCAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS CAA 72 bp ACGGAGGAGCGCAGCTCCTTGCGGTGGCTCGCTCTGTaGTTGCCACAGGGCCTGGTTTTGGTGGGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: TEERSSLRWLAL*LPQGLVLVGSG
Trigger: CCCGGAGCCCACCAAAACCAGGCCCTGTGGCAACAACAGAGCGAGCCACCGCAAGGAGCTGCGCTCCTCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS GCA 72 bp CCCTTGCTGGAAGGCACCGAGGTTCTGCAGTTGGGCTaGTGGACCACGGCGCTGTCAGAGAGAGCGCGGAGA +
Preference number: 6 (lower is better)
Translates to: PLLEGTEVLQLG*WTTALSERARR
Trigger: TCTCCGCGCTCTCTCTGACAGCGCCGTGGTCCAGCAGCCCAACTGCAGAACCTCGGTGCCTTCCAGCAAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 72 bp TGCTGCTGCCGCTGCTGCTGCTGCTGCTGCTGCCCTTaGTGGAAGGCACCGAGGTTCTGCAGTTGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: CCCRCCCCCCCP*WKAPRFCSWAA
Trigger: AGCAGCCCAACTGCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 72 bp AGGAGCTGCTGCTGCCGCTGCTGCTGCTGCTGCTGCTaGCCTTGCTGGAAGGCACCGAGGTTCTGCAGTTGG +
Preference number: 6 (lower is better)
Translates to: RSCCCRCCCCCC*PCWKAPRFCSW
Trigger: CCAACTGCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCTCCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 72 bp TGGAGGAGCTGCTGCTGCCGCTGCTGCTGCTGCTGCTaGTGCCCTTGCTGGAAGGCACCGAGGTTCTGCAGT +
Preference number: 6 (lower is better)
Translates to: WRSCCCRCCCCC*CPCWKAPRFCS
Trigger: ACTGCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCTCCTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 72 bp TGCTCTCTGAGTCGCTGGAGGAGCTGCTGCTGCCGCTaGTGCTGCTGCTGCTGCTGCCCTTGCTGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: CSLSRWRSCCCR*CCCCCCPCWKA
Trigger: TGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCTCCTCCAGCGACTCAGAGAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS CCA 72 bp GTGTCCGCTGCTGCTGTGCTTGGCCGCCATGGCAGGTaGCCTCTCCTGGGTCTGAAGGCCCACCTCCACATT +
Preference number: 6 (lower is better)
Translates to: VSAAAVLGRHGR*PLLGLKAHLHI
Trigger: AATGTGGAGGTGGGCCTTCAGACCCAGGAGAGGCCACCTGCCATGGCGGCCAAGCACAGCAGCAGCGGACAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS CCA 72 bp TTGCTGGAAGGCACCGAGGTTCTGCAGTTGGGCTGCTaGACCACGGCGCTGTCAGAGAGAGCGCGGAGAGCC +
Preference number: 6 (lower is better)
Translates to: LLEGTEVLQLGC*TTALSERARRA
Trigger: GGCTCTCCGCGCTCTCTCTGACAGCGCCGTGGTCCAGCAGCCCAACTGCAGAACCTCGGTGCCTTCCAGCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS CCA 72 bp TGCTGCCCTTGCTGGAAGGCACCGAGGTTCTGCAGTTaGGCTGCTGGACCACGGCGCTGTCAGAGAGAGCGC +
Preference number: 6 (lower is better)
Translates to: CCPCWKAPRFCS*AAGPRRCQRER
Trigger: GCGCTCTCTCTGACAGCGCCGTGGTCCAGCAGCCCAACTGCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS CCA 72 bp TGCTGCCGCTGCTGCTGCTGCTGCTGCTGCCCTTGCTaGAAGGCACCGAGGTTCTGCAGTTGGGCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: CCRCCCCCCCPC*KAPRFCSWAAG
Trigger: TCCAGCAGCCCAACTGCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCAGCGGCAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS CCA 72 bp TCCCGGAGGAGGCAGAGGCAGCCACGGTCTGTGCTTTaGACAGAGGGTACTCCTCCTGCTCGGACTCCAGGT +
Preference number: 6 (lower is better)
Translates to: SRRRQRQPRSVL*TEGTPPARTPG
Trigger: ACCTGGAGTCCGAGCAGGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGGCTGCCTCTGCCTCCTCCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS CAA 72 bp TTCCCGGAGGAGGCAGAGGCAGCCACGGTCTGTGCTTaGGACAGAGGGTACTCCTCCTGCTCGGACTCCAGG +
Preference number: 6 (lower is better)
Translates to: FPEEAEAATVCA*DRGYSSCSDSR
Trigger: CCTGGAGTCCGAGCAGGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGGCTGCCTCTGCCTCCTCCGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS CAA 90 bp AACTGCTCCTCCAGCTCCTTGGCGATGTCACTGGTGGTCCTGGCGTaGATGGAGCCTACAGGGGCCCTAGGACCACTGCCCCCGTTGGCA +
Preference number: 6 (lower is better)
Translates to: NCSSSSLAMSLVVLA*MEPTGALGPLPPLA
Trigger: TGCCAACGGGGGCAGTGGTCCTAGGGCCCCTGTAGGCTCCATCAACGCCAGGACCACCAGTGACATCGCCAAGGAGCTGGAGGAGCAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS CAA 90 bp GCCGCGGGCGGGGACTTCTGCTTCACGCCTTTACTCCCAGGGGCCTaGTTGGCTGTCCTTGGCCTTTGCTCCTCCTTGCAAGTGCTCTTG +
Preference number: 6 (lower is better)
Translates to: AAGGDFCFTPLLPGA*LAVLGLCSSLQVLL
Trigger: CAAGAGCACTTGCAAGGAGGAGCAAAGGCCAAGGACAGCCAACAAGGCCCCTGGGAGTAAAGGCGTGAAGCAGAAGTCCCCGCCCGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS GCA 72 bp TGGAGAGCTTGGCCTTGGCTCTGGCAGGCTCCGGCTTaGTGGCAGGGACTCCCCTGTATGATGTGCAGTGCA +
Preference number: 6 (lower is better)
Translates to: WRAWPWLWQAPA*WQGLPCMMCSA
Trigger: TGCACTGCACATCATACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000430789.1
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
ENST00000673529.1
CDS GCA 72 bp GCCACGGTCTGTGCTTTGGACAGAGGGTACTCCTCCTaGTCGGACTCCAGGTCGGAGTCCGAGGAGGAGGAT +
Preference number: 6 (lower is better)
Translates to: ATVCALDRGYSS*SDSRSESEEED
Trigger: ATCCTCCTCCTCGGACTCCGACCTGGAGTCCGAGCAGGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS GCA 72 bp CCTGTACACCCTGGCCCTGGGAGCGCAGGCTCAGTTTaGACAGCATTACTGAAGCAGACCCTGGGGTACCGG +
Preference number: 6 (lower is better)
Translates to: PVHPGPGSAGSV*TALLKQTLGYR
Trigger: CCGGTACCCCAGGGTCTGCTTCAGTAATGCTGTGCAAACTGAGCCTGCGCTCCCAGGGCCAGGGTGTACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS CCA 72 bp GCCCTGTTGTGTTGCTCTCTGTTGGCCGTCAGAGGGTaGGTGCCCAGCCTTCTGCCAGCCCATAGTGCCTCT +
Preference number: 6 (lower is better)
Translates to: ALLCCSLLAVRG*VPSLLPAHSAS
Trigger: AGAGGCACTATGGGCTGGCAGAAGGCTGGGCACCCACCCTCTGACGGCCAACAGAGAGCAACACAACAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS CCA 72 bp TTCTCGCAGGTCACGGAGGAGCGCAGCTCCTTGCGGTaGCTCGCTCTGTTGTTGCCACAGGGCCTGGTTTTG +
Preference number: 6 (lower is better)
Translates to: FSQVTEERSSLR*LALLLPQGLVL
Trigger: CAAAACCAGGCCCTGTGGCAACAACAGAGCGAGCCACCGCAAGGAGCTGCGCTCCTCCGTGACCTGCGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS CAA 72 bp TTGGAGAGCTTGGCCTTGGCTCTGGCAGGCTCCGGCTaGCTGGCAGGGACTCCCCTGTATGATGTGCAGTGC +
Preference number: 6 (lower is better)
Translates to: LESLALALAGSG*LAGTPLYDVQC
Trigger: GCACTGCACATCATACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000430789.1
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
ENST00000673529.1
CDS TCA 72 bp GGCAGGCTCCGGCTTGCTGGCAGGGACTCCCCTGTATaGTGTGCAGTGCACGCTGGTTTCCGAAGACGACTT +
Preference number: 6 (lower is better)
Translates to: GRLRLAGRDSPV*CAVHAGFRRRL
Trigger: AAGTCGTCTTCGGAAACCAGCGTGCACTGCACATCATACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000430789.1
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
ENST00000673529.1
CDS GCA 72 bp GTGGCCTCTCCTGGGTCTGAAGGCCCACCTCCACATTaGACACTTGTTTGGCCCGAGGCTGCTGTCTGCCAA +
Preference number: 6 (lower is better)
Translates to: VASPGSEGPPPH*TLVWPEAAVCQ
Trigger: TTGGCAGACAGCAGCCTCGGGCCAAACAAGTGTGCAATGTGGAGGTGGGCCTTCAGACCCAGGAGAGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS GCA 72 bp GGGATGGAGGAAAGTTCTGAACACAGTGTCCGCTGCTaGTGTGCTTGGCCGCCATGGCAGGTGGCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: GMEESSEHSVRC*CAWPPWQVASP
Trigger: AGGAGAGGCCACCTGCCATGGCGGCCAAGCACAGCAGCAGCGGACACTGTGTTCAGAACTTTCCTCCATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS GCA 72 bp ATCATTCCCGGAGGAGGCAGAGGCAGCCACGGTCTGTaGTTTGGACAGAGGGTACTCCTCCTGCTCGGACTC +
Preference number: 6 (lower is better)
Translates to: IIPGGGRGSHGL*FGQRVLLLLGL
Trigger: GAGTCCGAGCAGGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGGCTGCCTCTGCCTCCTCCGGGAATGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS CCA 72 bp ACACAGACAAGTTGGCTGCCTTCTACCAGCTCCCGGTaGTCCCACAGAGCAGATGCGCCACAGGCTGTGTCC +
Preference number: 6 (lower is better)
Translates to: TQTSWLPSTSSR*SHRADAPQAVS
Trigger: GGACACAGCCTGTGGCGCATCTGCTCTGTGGGACCACCGGGAGCTGGTAGAAGGCAGCCAACTTGTCTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS CAA 72 bp TCCTGTACACCCTGGCCCTGGGAGCGCAGGCTCAGTTaGCACAGCATTACTGAAGCAGACCCTGGGGTACCG +
Preference number: 6 (lower is better)
Translates to: SCTPWPWERRLS*HSITEADPGVP
Trigger: CGGTACCCCAGGGTCTGCTTCAGTAATGCTGTGCAAACTGAGCCTGCGCTCCCAGGGCCAGGGTGTACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS CAA 90 bp ATGCTGAACTTGGAGAGCTTGGCCTTGGCTCTGGCAGGCTCCGGCTaGCTGGCAGGGACTCCCCTGTATGATGTGCAGTGCACGCTGGTT +
Preference number: 6 (lower is better)
Translates to: MLNLESLALALAGSG*LAGTPLYDVQCTLV
Trigger: AACCAGCGTGCACTGCACATCATACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCAAGTTCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000430789.1
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
ENST00000673529.1
CDS CAA 90 bp GCGGGCGGGGACTTCTGCTTCACGCCTTTACTCCCAGGGGCCTTGTaGGCTGTCCTTGGCCTTTGCTCCTCCTTGCAAGTGCTCTTGATC +
Preference number: 6 (lower is better)
Translates to: AGGDFCFTPLLPGAL*AVLGLCSSLQVLLI
Trigger: GATCAAGAGCACTTGCAAGGAGGAGCAAAGGCCAAGGACAGCCAACAAGGCCCCTGGGAGTAAAGGCGTGAAGCAGAAGTCCCCGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS TCA 72 bp CTCCAGATCTACTCTCCTCCCCCTGCTTGGGGATGCTaGACTTGGAGAGCTTGGCCTTGGCTCTGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: LQIYSPPPAWGC*TWRAWPWLWQA
Trigger: AGCCTGCCAGAGCCAAGGCCAAGCTCTCCAAGTTCAGCATCCCCAAGCAGGGGGAGGAGAGTAGATCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000430789.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
ENST00000673529.1
CDS GCA 72 bp CTAGGGATGGAGGAAAGTTCTGAACACAGTGTCCGCTaGTGCTGTGCTTGGCCGCCATGGCAGGTGGCCTCT +
Preference number: 6 (lower is better)
Translates to: LGMEESSEHSVR*CCAWPPWQVAS
Trigger: AGAGGCCACCTGCCATGGCGGCCAAGCACAGCAGCAGCGGACACTGTGTTCAGAACTTTCCTCCATCCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS GCA 72 bp GCTCCGGCTTGCTGGCAGGGACTCCCCTGTATGATGTaGAGTGCACGCTGGTTTCCGAAGACGACTTCAGCT +
Preference number: 6 (lower is better)
Translates to: APACWQGLPCMM*SARWFPKTTSA
Trigger: AGCTGAAGTCGTCTTCGGAAACCAGCGTGCACTGCACATCATACAGGGGAGTCCCTGCCAGCAAGCCGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000430789.1
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
ENST00000673529.1
CDS GCA 72 bp AGAATTCCTAGAGAGCAGCTCAGAGCCCTGCAGTTGTaGCTCACCACGCGAACCAAACCTCGCACTCCCCGC +
Preference number: 6 (lower is better)
Translates to: RIPREQLRALQL*LTTRTKPRTPR
Trigger: GCGGGGAGTGCGAGGTTTGGTTCGCGTGGTGAGGCACAACTGCAGGGCTCTGAGCTGCTCTCTAGGAATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415384.2
ENST00000427118.1
CDS GCA 72 bp GCTGAGAAGCGCATGTCTCCATCAGGGCCCTACCTCTaGTTCTCCACAGTTGGCCTAGAACCGGAAGCCCCT +
Preference number: 6 (lower is better)
Translates to: AEKRMSPSGPYL*FSTVGLEPEAP
Trigger: AGGGGCTTCCGGTTCTAGGCCAACTGTGGAGAAGCAGAGGTAGGGCCCTGATGGAGACATGCGCTTCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440445.6
CDS CCA 72 bp TTTGGCAAAGCCTTTTCTGCAGGTGTGTCCGAGGTGTaGCTGGGCGGTGCGCTCTCAGAGTCCTTGGTGGCA +
Preference number: 6 (lower is better)
Translates to: FGKAFSAGVSEV*LGGALSESLVA
Trigger: TGCCACCAAGGACTCTGAGAGCGCACCGCCCAGCCACACCTCGGACACACCTGCAGAAAAGGCTTTGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS CCA 72 bp AGAACCGCTGACTGGGGCTGCCAGAAATGTAAACCCTaGGTGCAAGTGACGGGATCCCTCCAGCGTCAAGCC +
Preference number: 6 (lower is better)
Translates to: RTADWGCQKCKP*VQVTGSLQRQA
Trigger: GGCTTGACGCTGGAGGGATCCCGTCACTTGCACCCAGGGTTTACATTTCTGGCAGCCCCAGTCAGCGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415384.2
ENST00000427118.1
CDS CCA 72 bp GATGCGCCACAGGCTGTGTCCTGTACACCCTGGCCCTaGGAGCGCAGGCTCAGTTTGCACAGCATTACTGAA +
Preference number: 6 (lower is better)
Translates to: DAPQAVSCTPWP*ERRLSLHSITE
Trigger: TTCAGTAATGCTGTGCAAACTGAGCCTGCGCTCCCAGGGCCAGGGTGTACAGGACACAGCCTGTGGCGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS CCA 72 bp CAGCCTAGACTCAGGATCGCCCTAAGGGAGTTGGCATaGAAGATTTCAGAGCTGGGCAGACTGGGCGGGGAC +
Preference number: 6 (lower is better)
Translates to: QPRLRIALRELA*KISELGRLGGD
Trigger: GTCCCCGCCCAGTCTGCCCAGCTCTGAAATCTTCCATGCCAACTCCCTTAGGGCGATCCTGAGTCTAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672822.1
ENST00000683540.1
CDS CAA 90 bp AGGTGGCCTCTCCTGGGTCTGAAGGCCCACCTCCACATTGCACACTaGTTTGGCCCGAGGCTGCTGTCTGCCAACACCATCTCCAAGCAA +
Preference number: 6 (lower is better)
Translates to: RWPLLGLKAHLHIAH*FGPRLLSANTISKQ
Trigger: TTGCTTGGAGATGGTGTTGGCAGACAGCAGCCTCGGGCCAAACAAGTGTGCAATGTGGAGGTGGGCCTTCAGACCCAGGAGAGGCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS CAA 90 bp GAGGAGGATGAAGATGACGACTCTGTCTCAATGAACTCCTTGGATTaGGGGACGATCCTGCTTAGCCCCCGCGTGCGGCGCTTCTCGCAG +
Preference number: 6 (lower is better)
Translates to: EEDEDDDSVSMNSLD*GTILLSPRVRRFSQ
Trigger: CTGCGAGAAGCGCCGCACGCGGGGGCTAAGCAGGATCGTCCCCAAATCCAAGGAGTTCATTGAGACAGAGTCGTCATCTTCATCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS CAA 90 bp TGTCAGCACTTGGTGATGCACCAGAACAGGAAGCCTGTAATGGCCTaGGGGTGCATAAAAAGGGATCTATCCGGCCGGGCGCGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: CQHLVMHQNRKPVMA*GCIKRDLSGRARWL
Trigger: CAGCCACCGCGCCCGGCCGGATAGATCCCTTTTTATGCACCCCAAGGCCATTACAGGCTTCCTGTTCTGGTGCATCACCAAGTGCTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498090.1
CDS CAA 90 bp CAGGCTGTGTCCTGTACACCCTGGCCCTGGGAGCGCAGGCTCAGTTaGCACAGCATTACTGAAGCAGACCCTGGGGTACCGGATTATTTC +
Preference number: 6 (lower is better)
Translates to: QAVSCTPWPWERRLS*HSITEADPGVPDYF
Trigger: GAAATAATCCGGTACCCCAGGGTCTGCTTCAGTAATGCTGTGCAAACTGAGCCTGCGCTCCCAGGGCCAGGGTGTACAGGACACAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS CAA 90 bp CCAGGCAAGCTACCTGTAGGCCATGTCTTCATGCACACAGACAAGTaGGCTGCCTTCTACCAGCTCCCGGTGGTCCCACAGAGCAGATGC +
Preference number: 6 (lower is better)
Translates to: PGKLPVGHVFMHTDK*AAFYQLPVVPQSRC
Trigger: GCATCTGCTCTGTGGGACCACCGGGAGCTGGTAGAAGGCAGCCAACTTGTCTGTGTGCATGAAGACATGGCCTACAGGTAGCTTGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS CAA 90 bp CATGAACTGCCTGTACAGCCTAGACTCAGGATCGCCCTAAGGGAGTaGGCATGGAAGATTTCAGAGCTGGGCAGACTGGGCGGGGACCTC +
Preference number: 6 (lower is better)
Translates to: HELPVQPRLRIALRE*AWKISELGRLGGDL
Trigger: GAGGTCCCCGCCCAGTCTGCCCAGCTCTGAAATCTTCCATGCCAACTCCCTTAGGGCGATCCTGAGTCTAGGCTGTACAGGCAGTTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672822.1
ENST00000683540.1
CDS TCA 72 bp GCTGATAAAGACTCACCTCCCCCTGCTTGGGGATGCTaGACTTGGAGAGCTTGGCCTTGGCTCTGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: ADKDSPPPAWGC*TWRAWPWLWQA
Trigger: AGCCTGCCAGAGCCAAGGCCAAGCTCTCCAAGTTCAGCATCCCCAAGCAGGGGGAGGTGAGTCTTTATCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498090.1
CDS TCA 72 bp ATGGTGAAAACCCGTCTCTACGTGAGGTCTCCGCCGTaGGGCTGCAGCTGGCTGTCGGCCTTAGGCTTTTTG +
Preference number: 6 (lower is better)
Translates to: MVKTRLYVRSPP*GCSWLSALGFL
Trigger: CAAAAAGCCTAAGGCCGACAGCCAGCTGCAGCCTCACGGCGGAGACCTCACGTAGAGACGGGTTTTCACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671937.1
CDS GCA 72 bp GCCTTCTGCCAGCCCATAGTGCCTCTCTTACTCTGCTaGACGGGGACAGCTGCTGGTGTGGAAGTTGTAGTG +
Preference number: 6 (lower is better)
Translates to: AFCQPIVPLLLC*TGTAAGVEVVV
Trigger: CACTACAACTTCCACACCAGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGGCACTATGGGCTGGCAGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000432037.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS GCA 72 bp CCAGCCTTCTGCCAGCCCATAGTGCCTCTCTTACTCTaGTGCACGGGGACAGCTGCTGGTGTGGAAGTTGTA +
Preference number: 6 (lower is better)
Translates to: PAFCQPIVPLLL*CTGTAAGVEVV
Trigger: TACAACTTCCACACCAGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGGCACTATGGGCTGGCAGAAGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000432037.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS GCA 72 bp TGGCCGTCCATTGGCCTCACATACGCGGTCGGTTTCTaGTGGACCAGGCTGGGTTTTGAAGCTAGGGATGGA +
Preference number: 6 (lower is better)
Translates to: WPSIGLTYAVGF*WTRLGFEARDG
Trigger: TCCATCCCTAGCTTCAAAACCCAGCCTGGTCCAGCAGAAACCGACCGCGTATGTGAGGCCAATGGACGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS GCA 72 bp ATGCACCAGAACAGGAAGCCTGTAATGGCCTTGGGGTaGATAAAAAGGGATCTATCCGGCCGGGCGCGGTGG +
Preference number: 6 (lower is better)
Translates to: MHQNRKPVMALG*IKRDLSGRARW
Trigger: CCACCGCGCCCGGCCGGATAGATCCCTTTTTATGCACCCCAAGGCCATTACAGGCTTCCTGTTCTGGTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498090.1
CDS CCA 72 bp GGGAGTTGGCATGGAAGATTTCAGAGCTGGGCAGACTaGGCGGGGACCTCTCATCTGTGTTTCCTGAGGGTC +
Preference number: 6 (lower is better)
Translates to: GSWHGRFQSWAD*AGTSHLCFLRV
Trigger: GACCCTCAGGAAACACAGATGAGAGGTCCCCGCCCAGTCTGCCCAGCTCTGAAATCTTCCATGCCAACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672822.1
ENST00000683540.1
CDS CCA 72 bp GCACTTTTTGTGGCAGGGCCTGGTCTACCAGAAGGCTaGAAGCAGGAACCTGGACTCTACTCTGGGGAGACC +
Preference number: 6 (lower is better)
Translates to: ALFVAGPGLPEG*KQEPGLYSGET
Trigger: GGTCTCCCCAGAGTAGAGTCCAGGTTCCTGCTTCCAGCCTTCTGGTAGACCAGGCCCTGCCACAAAAAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683540.1
CDS CAA 72 bp GGGGACTTCTGCTTCACGCCTTTACTCCCAGGGGCCTaGTTGGCTGTCCTTGGCCTTTGCTCCTCCTTGCAA +
Preference number: 6 (lower is better)
Translates to: GDFCFTPLLPGA*LAVLGLCSSLQ
Trigger: TTGCAAGGAGGAGCAAAGGCCAAGGACAGCCAACAAGGCCCCTGGGAGTAAAGGCGTGAAGCAGAAGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS CAA 72 bp GAAGATGACGACTCTGTCTCAATGAACTCCTTGGATTaGGGGACGATCCTGCTTAGCCCCCGCGTGCGGCGC +
Preference number: 6 (lower is better)
Translates to: EDDDSVSMNSLD*GTILLSPRVRR
Trigger: GCGCCGCACGCGGGGGCTAAGCAGGATCGTCCCCAAATCCAAGGAGTTCATTGAGACAGAGTCGTCATCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS CAA 72 bp CCTCTCTGCAATTCTCCTGCCACCCAGTTTTGCCCCTaGAGTTCTGCCATAACCGCACCTGGAGTGAGGCGC +
Preference number: 6 (lower is better)
Translates to: PLCNSPATQFCP*SSAITAPGVRR
Trigger: GCGCCTCACTCCAGGTGCGGTTATGGCAGAACTCAAGGGGCAAAACTGGGTGGCAGGAGAATTGCAGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483600.1
CDS TCA 72 bp GAAGACGACTTCAGCTTAGGAGACTCATCAGGGGCCTaGTCTTGGCCGTCCATTGGCCTCACATACGCGGTC +
Preference number: 6 (lower is better)
Translates to: EDDFSLGDSSGA*SWPSIGLTYAV
Trigger: GACCGCGTATGTGAGGCCAATGGACGGCCAAGATCAGGCCCCTGATGAGTCTCCTAAGCTGAAGTCGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000430789.1
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS TCA 72 bp ACTGGGGCTGCCAGAAATGTAAACCCTGGGTGCAAGTaGCGGGATCCCTCCAGCGTCAAGCCGAAGAGTCAT +
Preference number: 6 (lower is better)
Translates to: TGAARNVNPGCK*RDPSSVKPKSH
Trigger: ATGACTCTTCGGCTTGACGCTGGAGGGATCCCGTCACTTGCACCCAGGGTTTACATTTCTGGCAGCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415384.2
ENST00000427118.1
CDS TCA 72 bp CTGAGCGTGGAGCTCTCTTCTCGCTGGCGAGCTTTCTaGATGGCACTTTTTGTGGCAGGGCCTGGTCTACCA +
Preference number: 6 (lower is better)
Translates to: LSVELSSRWRAF*MALFVAGPGLP
Trigger: TGGTAGACCAGGCCCTGCCACAAAAAGTGCCATTCAGAAAGCTCGCCAGCGAGAAGAGAGCTCCACGCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483600.1
ENST00000683540.1
CDS GCA 72 bp CTTGCGTTTCCTCTTGGATTTTGGCAAAGCCTTTTCTaGAGGTGTGTCCGAGGTGTGGCTGGGCGGTGCGCT +
Preference number: 6 (lower is better)
Translates to: LAFPLGFWQSLF*RCVRGVAGRCA
Trigger: AGCGCACCGCCCAGCCACACCTCGGACACACCTGCAGAAAAGGCTTTGCCAAAATCCAAGAGGAAACGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS GCA 72 bp GATTCCCCAGAATTCCTAGAGAGCAGCTCAGAGCCCTaGAGTTGTGCCTCACCACGCGAACCAAACCTCGCA +
Preference number: 6 (lower is better)
Translates to: DSPEFLESSSEP*SCASPREPNLA
Trigger: TGCGAGGTTTGGTTCGCGTGGTGAGGCACAACTGCAGGGCTCTGAGCTGCTCTCTAGGAATTCTGGGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415384.2
ENST00000427118.1
CDS GCA 72 bp CAATTCTCCTGCCACCCAGTTTTGCCCCTTGAGTTCTaGCATAACCGCACCTGGAGTGAGGCGCTCCTTGTC +
Preference number: 6 (lower is better)
Translates to: QFSCHPVLPLEF*HNRTWSEALLV
Trigger: GACAAGGAGCGCCTCACTCCAGGTGCGGTTATGGCAGAACTCAAGGGGCAAAACTGGGTGGCAGGAGAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483600.1
CDS CCA 72 bp ACTTCTGCTTCACGCCTTTACTCCCAGGGGCCTTGTTaGCTGTCCTTGGCCTTTGCTCCTCCTTGCAAGTGC +
Preference number: 6 (lower is better)
Translates to: TSASRLYSQGPC*LSLAFAPPCKC
Trigger: GCACTTGCAAGGAGGAGCAAAGGCCAAGGACAGCCAACAAGGCCCCTGGGAGTAAAGGCGTGAAGCAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS CAA 72 bp GTGACTAAACCAGATACCCAACCGGCCAACTCTCACTaGTGGCAGGGCCTGGTCTACCAGAAGGCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: VTKPDTQPANSH*WQGLVYQKAGS
Trigger: GCTTCCAGCCTTCTGGTAGACCAGGCCCTGCCACAAGTGAGAGTTGGCCGGTTGGGTATCTGGTTTAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672822.1
CDS CAA 72 bp CCTGTACAGCCTAGACTCAGGATCGCCCTAAGGGAGTaGGCATGGAAGATTTCAGAGCTGGGCAGACTGGGC +
Preference number: 6 (lower is better)
Translates to: PVQPRLRIALRE*AWKISELGRLG
Trigger: GCCCAGTCTGCCCAGCTCTGAAATCTTCCATGCCAACTCCCTTAGGGCGATCCTGAGTCTAGGCTGTACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672822.1
ENST00000683540.1
CDS CAA 90 bp TTGGCCTCACATACGCGGTCGGTTTCTGCTGGACCAGGCTGGGTTTaGAAGCTAGGGATGGAGGAAAGTTCTGAACACAGTGTCCGCTGC +
Preference number: 6 (lower is better)
Translates to: LASHTRSVSAGPGWV*KLGMEESSEHSVRC
Trigger: GCAGCGGACACTGTGTTCAGAACTTTCCTCCATCCCTAGCTTCAAAACCCAGCCTGGTCCAGCAGAAACCGACCGCGTATGTGAGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS CAA 90 bp TGGGGCAGGTGTTCTGGGATCCTGGACAGGAGGGTCAGGTCGATTTaGACCCAGAGAGACCTGATCTCATCACTGTCCTTTAGAGGGGAG +
Preference number: 6 (lower is better)
Translates to: WGRCSGILDRRVRSI*TQRDLISSLSFRGE
Trigger: CTCCCCTCTAAAGGACAGTGATGAGATCAGGTCTCTCTGGGTCAAAATCGACCTGACCCTCCTGTCCAGGATCCCAGAACACCTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS CCA 72 bp AGTGCCTCTCTTACTCTGCTGCACGGGGACAGCTGCTaGTGTGGAAGTTGTAGTGCTACAGATAGACGAGGG +
Preference number: 6 (lower is better)
Translates to: SASLTLLHGDSC*CGSCSATDRRG
Trigger: CCCTCGTCTATCTGTAGCACTACAACTTCCACACCAGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000432037.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS CAA 72 bp TTGGTGATGCACCAGAACAGGAAGCCTGTAATGGCCTaGGGGTGCATAAAAAGGGATCTATCCGGCCGGGCG +
Preference number: 6 (lower is better)
Translates to: LVMHQNRKPVMA*GCIKRDLSGRA
Trigger: CGCCCGGCCGGATAGATCCCTTTTTATGCACCCCAAGGCCATTACAGGCTTCCTGTTCTGGTGCATCACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498090.1
CDS TCA 72 bp GCCCTGGGAGCGCAGGCTCAGTTTGCACAGCATTACTaGAGCAGACCCTGGGGTACCGGATTATTTCTTCAA +
Preference number: 6 (lower is better)
Translates to: ALGAQAQFAQHY*SRPWGTGLFLQ
Trigger: TTGAAGAAATAATCCGGTACCCCAGGGTCTGCTTCAGTAATGCTGTGCAAACTGAGCCTGCGCTCCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS GCA 72 bp TTACTCCCAGGGGCCTTGTTGGCTGTCCTTGGCCTTTaGTCCTCCTTGCAAGTGCTCTTGATCTCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: LLPGALLAVLGL*SSLQVLLISFS
Trigger: AGAGAAGGAGATCAAGAGCACTTGCAAGGAGGAGCAAAGGCCAAGGACAGCCAACAAGGCCCCTGGGAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS CCA 72 bp GCCTCACATACGCGGTCGGTTTCTGCTGGACCAGGCTaGGTTTTGAAGCTAGGGATGGAGGAAAGTTCTGAA +
Preference number: 6 (lower is better)
Translates to: ASHTRSVSAGPG*VLKLGMEESSE
Trigger: TTCAGAACTTTCCTCCATCCCTAGCTTCAAAACCCAGCCTGGTCCAGCAGAAACCGACCGCGTATGTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS CCA 72 bp CCCCTTTGTTCCTTTTTCTGGGCAAGAACCGCTGACTaGGGCTGCCAGAAATGTAAACCCTGGGTGCAAGTG +
Preference number: 6 (lower is better)
Translates to: PLCSFFWARTAD*GCQKCKPWVQV
Trigger: CACTTGCACCCAGGGTTTACATTTCTGGCAGCCCCAGTCAGCGGTTCTTGCCCAGAAAAAGGAACAAAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415384.2
ENST00000427118.1
CDS CAA 72 bp TTTACTCCCAGGGGCCTTGTTGGCTGTCCTTGGCCTTaGCTCCTCCTTGCAAGTGCTCTTGATCTCCTTCTC +
Preference number: 6 (lower is better)
Translates to: FTPRGLVGCPWP*LLLASALDLLL
Trigger: GAGAAGGAGATCAAGAGCACTTGCAAGGAGGAGCAAAGGCCAAGGACAGCCAACAAGGCCCCTGGGAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS TCA 72 bp CTGAGCGTGGAGCTCTCTTCTCGCTGGCGAGCTTTCTaGATGGCACTTTCTCACAGAACAAGAAGTGCAAGG +
Preference number: 6 (lower is better)
Translates to: LSVELSSRWRAF*MALSHRTRSAR
Trigger: CCTTGCACTTCTTGTTCTGTGAGAAAGTGCCATTCAGAAAGCTCGCCAGCGAGAAGAGAGCTCCACGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672999.1
CDS GCA 72 bp CATAGTGCCTCTCTTACTCTGCTGCACGGGGACAGCTaGTGGTGTGGAAGTTGTAGTGCTACAGATAGACGA +
Preference number: 6 (lower is better)
Translates to: HSASLTLLHGDS*WCGSCSATDRR
Trigger: TCGTCTATCTGTAGCACTACAACTTCCACACCAGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGGCACTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000432037.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS CCA 72 bp GCGTGGAGCTCTCTTCTCGCTGGCGAGCTTTCTGAATaGCACTTTCTGTACAAACAGGAAGAGCATGTGTGG +
Preference number: 6 (lower is better)
Translates to: AWSSLLAGELSE*HFLYKQEEHVW
Trigger: CCACACATGCTCTTCCTGTTTGTACAGAAAGTGCCATTCAGAAAGCTCGCCAGCGAGAAGAGAGCTCCACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672822.1
CDS CAA 72 bp GCTCCCGTTCCTTTTCTTTCTCTCCCCAGTAAGTCGTaGAACGTCTTTCTTCTGAGGCTGAGCGTGGAGCTC +
Preference number: 6 (lower is better)
Translates to: APVPFLSLPSKS*NVFLLRLSVEL
Trigger: GAGCTCCACGCTCAGCCTCAGAAGAAAGACGTTCAACGACTTACTGGGGAGAGAAAGAAAAGGAACGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317233.8
ENST00000416492.5
ENST00000483600.1
ENST00000672204.1
ENST00000672756.2
ENST00000672822.1
ENST00000672857.1
ENST00000672999.1
ENST00000683540.1
CDS CAA 72 bp CATACGCGGTCGGTTTCTGCTGGACCAGGCTGGGTTTaGAAGCTAGGGATGGAGGAAAGTTCTGAACACAGT +
Preference number: 6 (lower is better)
Translates to: HTRSVSAGPGWV*KLGMEESSEHS
Trigger: ACTGTGTTCAGAACTTTCCTCCATCCCTAGCTTCAAAACCCAGCCTGGTCCAGCAGAAACCGACCGCGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS CAA 90 bp TTGCCATTAGGTCGGCTGGAAGAAGTTAAGTCCTCGCTGGTGTATTaGTGTTTAGATGCATCAGAGAGGGGTGAGATGGGCGACCGAAGC +
Preference number: 6 (lower is better)
Translates to: LPLGRLEEVKSSLVY*CLDASERGEMGDRS
Trigger: GCTTCGGTCGCCCATCTCACCCCTCTCTGATGCATCTAAACACAAATACACCAGCGAGGACTTAACTTCTTCCAGCCGACCTAATGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS CCA 72 bp TGCAGTGGTTTGCAGACAAAGTATTACTGGTGGAGGTaGCCAGTCTTGAAGAGCTGTCTTTCTCTCCCTGGG +
Preference number: 6 (lower is better)
Translates to: CSGLQTKYYWWR*PVLKSCLSLPG
Trigger: CCCAGGGAGAGAAAGACAGCTCTTCAAGACTGGCCACCTCCACCAGTAATACTTTGTCTGCAAACCACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS CCA 72 bp GCGTGGAGCTCTCTTCTCGCTGGCGAGCTTTCTGAATaGCACTTTCTCACAGAACAAGAAGTGCAAGGAACA +
Preference number: 6 (lower is better)
Translates to: AWSSLLAGELSE*HFLTEQEVQGT
Trigger: TGTTCCTTGCACTTCTTGTTCTGTGAGAAAGTGCCATTCAGAAAGCTCGCCAGCGAGAAGAGAGCTCCACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672999.1
CDS CAA 72 bp GGTCGGCTGGAAGAAGTTAAGTCCTCGCTGGTGTATTaGTGTTTAGATGCATCAGAGAGGGGTGAGATGGGC +
Preference number: 6 (lower is better)
Translates to: GRLEEVKSSLVY*CLDASERGEMG
Trigger: GCCCATCTCACCCCTCTCTGATGCATCTAAACACAAATACACCAGCGAGGACTTAACTTCTTCCAGCCGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS GCA 72 bp CCTGGACGTCCTCTTTCACCGGGTTGTAGTACTGATTaGTCTCTGACCCGTGGCTTTCATTTTGGATCAGAA +
Preference number: 6 (lower is better)
Translates to: PGRPLSPGCSTD*SLTRGFHFGSE
Trigger: TTCTGATCCAAAATGAAAGCCACGGGTCAGAGAGCAATCAGTACTACAACCCGGTGAAAGAGGACGTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672204.1
ENST00000672756.2
CDS CCA 72 bp GTCTTCGTTGTCACACTTGCGTTTCCTCTTGGATTTTaGCAAAGCCTTTTCTGCAGGTGTGTCCGAGGTGTG +
Preference number: 6 (lower is better)
Translates to: VFVVTLAFPLGF*QSLFCRCVRGV
Trigger: CACACCTCGGACACACCTGCAGAAAAGGCTTTGCCAAAATCCAAGAGGAAACGCAAGTGTGACAACGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS CAA 72 bp CGTCTTCGTTGTCACACTTGCGTTTCCTCTTGGATTTaGGCAAAGCCTTTTCTGCAGGTGTGTCCGAGGTGT +
Preference number: 6 (lower is better)
Translates to: RLRCHTCVSSWI*AKPFLQVCPRC
Trigger: ACACCTCGGACACACCTGCAGAAAAGGCTTTGCCAAAATCCAAGAGGAAACGCAAGTGTGACAACGAAGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS TCA 72 bp TGCAGACAAAGTATTACTGGTGGAGGTGGCCAGTCTTaGAGAGCTGTCTTTCTCTCCCTGGGACTTCTTGAT +
Preference number: 6 (lower is better)
Translates to: CRQSITGGGGQS*RAVFLSLGLLD
Trigger: ATCAAGAAGTCCCAGGGAGAGAAAGACAGCTCTTCAAGACTGGCCACCTCCACCAGTAATACTTTGTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS CCA 72 bp CGATCTTGTTCACAGGAGTCTGAGGAACCCCAGGTTTaGGAACTCCAACGAGATGACTCTGATTGGATCTAT +
Preference number: 6 (lower is better)
Translates to: RSCSQESEEPQV*ELQRDDSDWIY
Trigger: ATAGATCCAATCAGAGTCATCTCGTTGGAGTTCCCAAACCTGGGGTTCCTCAGACTCCTGTGAACAAGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000423966.6
ENST00000424600.5
ENST00000432037.5
ENST00000441400.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
ENST00000673328.1
CDS CCA 72 bp TGGTTCCACTTTGCCAGGTGCTTGAATAGCAGAAAGTaGTGGAAGCCAGGTCATCTCCCGGATTATTTCTTC +
Preference number: 6 (lower is better)
Translates to: WFHFARCLNSRK*WKPGHLPDYFF
Trigger: GAAGAAATAATCCGGGAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTGGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000430789.1
ENST00000672204.1
ENST00000672756.2
CDS CAA 90 bp TCGGCCTTAGGCTTTTTGCTGGAAGAGGCTGAAGTAAACAAACTGTaGCCATTAGGTCGGCTGGAAGAAGTTAAGTCCTCGCTGGTGTAT +
Preference number: 6 (lower is better)
Translates to: SALGFLLEEAEVNKL*PLGRLEEVKSSLVY
Trigger: ATACACCAGCGAGGACTTAACTTCTTCCAGCCGACCTAATGGCAACAGTTTGTTTACTTCAGCCTCTTCCAGCAAAAAGCCTAAGGCCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS CAA 90 bp ACAAACAGGAAGAGCATGTGTGGTCACAACCCAAGTGTGCAGGTGTaGATAGAGGATGTGAAAGTGTGGAGGCGAGTGACTAAACCAGAT +
Preference number: 6 (lower is better)
Translates to: TNRKSMCGHNPSVQV*IEDVKVWRRVTKPD
Trigger: ATCTGGTTTAGTCACTCGCCTCCACACTTTCACATCCTCTATCAACACCTGCACACTTGGGTTGTGACCACACATGCTCTTCCTGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672822.1
CDS CAA 90 bp GCCCAAGGATCCCATCATGGACGAAATTCTCTGCATCTGGCCACTTaGCCTTCCAGCACATTGATTCTTCTTCTGAGGTTGGTTTTTCTT +
Preference number: 6 (lower is better)
Translates to: AQGSHHGRNSLHLAT*PSSTLILLLRLVFL
Trigger: AAGAAAAACCAACCTCAGAAGAAGAATCAATGTGCTGGAAGGCAAAGTGGCCAGATGCAGAGAATTTCGTCCATGATGGGATCCTTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672999.1
CDS TCA 72 bp TCCTTGTCTCTAGCCTCAACGTCTTCCTTTGCAACATaGGAAGGCTGGATTGGGTGTTCTTTGTCTCTGTCA +
Preference number: 6 (lower is better)
Translates to: SLSLASTSSFAT*EGWIGCSLSLS
Trigger: TGACAGAGACAAAGAACACCCAATCCAGCCTTCTCATGTTGCAAAGGAAGACGTTGAGGCTAGAGACAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483600.1
CDS CCA 72 bp GGTGTGGAAGTTGTAGTGCTACAGATAGACGAGGGCTaGTTCTGGGCTCTTGAATCTGCAACAAAATGTTCA +
Preference number: 6 (lower is better)
Translates to: GVEVVVLQIDEG*FWALESATKCS
Trigger: TGAACATTTTGTTGCAGATTCAAGAGCCCAGAACCAGCCCTCGTCTATCTGTAGCACTACAACTTCCACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000423966.6
ENST00000432037.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS CCA 72 bp TCATGTTGCAGTGGTTTGCAGACAAAGTATTACTGGTaGAGGTGGCCAGTCTTGAAGAGCTGTCTTTCTCTC +
Preference number: 6 (lower is better)
Translates to: SCCSGLQTKYYW*RWPVLKSCLSL
Trigger: GAGAGAAAGACAGCTCTTCAAGACTGGCCACCTCCACCAGTAATACTTTGTCTGCAAACCACTGCAACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS CCA 72 bp AAAGGAGTGTATCATATCTGCCTTGCAGGGGTGTTGTaGGACTCAGAAGATGTCCATAACATCTATGCCCAG +
Preference number: 6 (lower is better)
Translates to: KGVYHICLAGVL*DSEDVHNIYAQ
Trigger: CTGGGCATAGATGTTATGGACATCTTCTGAGTCCCACAACACCCCTGCAAGGCAGATATGATACACTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672822.1
ENST00000683540.1
CDS CAA 72 bp GGCTTTTTGCTGGAAGAGGCTGAAGTAAACAAACTGTaGCCATTAGGTCGGCTGGAAGAAGTTAAGTCCTCG +
Preference number: 6 (lower is better)
Translates to: GFLLEEAEVNKL*PLGRLEEVKSS
Trigger: CGAGGACTTAACTTCTTCCAGCCGACCTAATGGCAACAGTTTGTTTACTTCAGCCTCTTCCAGCAAAAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS CAA 72 bp GTGAAAGGAGTGTATCATATCTGCCTTGCAGGGGTGTaGTGGGACTCAGAAGATGTCCATAACATCTATGCC +
Preference number: 6 (lower is better)
Translates to: VKGVYHICLAGV*WDSEDVHNIYA
Trigger: GGCATAGATGTTATGGACATCTTCTGAGTCCCACAACACCCCTGCAAGGCAGATATGATACACTCCTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672822.1
ENST00000683540.1
CDS TCA 72 bp AGTGCTACAGATAGACGAGGGCTGGTTCTGGGCTCTTaGATCTGCAACAAAATGTTCATCGATCTTGTTCAC +
Preference number: 6 (lower is better)
Translates to: SATDRRGLVLGS*ICNKMFIDLVH
Trigger: GTGAACAAGATCGATGAACATTTTGTTGCAGATTCAAGAGCCCAGAACCAGCCCTCGTCTATCTGTAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000423966.6
ENST00000432037.5
ENST00000441400.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS GCA 72 bp TTAGAGACAACAGAAACACCGGAGATAATCAACAGGTaGCCTTATCAATCACAGAGCCAGGGTTGTCACATG +
Preference number: 6 (lower is better)
Translates to: LETTETPEIINR*PYQSQSQGCHM
Trigger: CATGTGACAACCCTGGCTCTGTGATTGATAAGGGCACCTGTTGATTATCTCCGGTGTTTCTGTTGTCTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498090.1
CDS CCA 72 bp GAAGTTGTAGTGCTACAGATAGACGAGGGCTGGTTCTaGGCTCTTGAATCTGCAACAAAATGTTCATCGATC +
Preference number: 6 (lower is better)
Translates to: EVVVLQIDEGWF*ALESATKCSSI
Trigger: GATCGATGAACATTTTGTTGCAGATTCAAGAGCCCAGAACCAGCCCTCGTCTATCTGTAGCACTACAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000423966.6
ENST00000432037.5
ENST00000498090.1
ENST00000672204.1
ENST00000672269.1
ENST00000672756.2
CDS CCA 72 bp ATTGGTATTGCCACACTGTTGATGTTCATGTTGCAGTaGTTTGCAGACAAAGTATTACTGGTGGAGGTGGCC +
Preference number: 6 (lower is better)
Translates to: IGIATLLMFMLQ*FADKVLLVEVA
Trigger: GGCCACCTCCACCAGTAATACTTTGTCTGCAAACCACTGCAACATGAACATCAACAGTGTGGCAATACCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS CCA 72 bp TGGATCCGGTTGGAGAGTTCATCCCCCTTGTTAGTCTaGAGAAAGAAAAACACATCCACGCTATTGTTAGAG +
Preference number: 6 (lower is better)
Translates to: WIRLESSSPLLV*RKKNTSTLLLE
Trigger: CTCTAACAATAGCGTGGATGTGTTTTTCTTTCTCCAGACTAACAAGGGGGATGAACTCTCCAACCGGATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000498090.1
CDS CAA 72 bp AAAGTGTTCTGGATCCGGTTGGAGAGTTCATCCCCCTaGTTAGTCTGGAGAAAGAAAAACACATCCACGCTA +
Preference number: 6 (lower is better)
Translates to: KVFWIRLESSSP*LVWRKKNTSTL
Trigger: TAGCGTGGATGTGTTTTTCTTTCTCCAGACTAACAAGGGGGATGAACTCTCCAACCGGATCCAGAACACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000498090.1
CDS CAA 90 bp CTTATTTGGAAATGGAAATTTGGTTGGTTCCACTTTGCCAGGTGCTaGAATAGCAGAAAGTGGTGGAAGCCAGGTCATCTCCCGGATTAT +
Preference number: 6 (lower is better)
Translates to: LIWKWKFGWFHFARC*NSRKWWKPGHLPDY
Trigger: ATAATCCGGGAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTGGAACCAACCAAATTTCCATTTCCAAATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000430789.1
ENST00000672204.1
ENST00000672756.2
CDS CAA 90 bp TCATCCCCCTTGTTAGTCTGGAGAAAGAAAAACACATCCACGCTATaGTTAGAGACAACAGAAACACCGGAGATAATCAACAGGTGCCCT +
Preference number: 6 (lower is better)
Translates to: SSPLLVWRKKNTSTL*LETTETPEIINRCP
Trigger: AGGGCACCTGTTGATTATCTCCGGTGTTTCTGTTGTCTCTAACAATAGCGTGGATGTGTTTTTCTTTCTCCAGACTAACAAGGGGGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000498090.1
CDS GCA 72 bp ATGCATTTCTATCTGGTTCATAGACACTCCTGCATCTaGTGGCTGATGACTGAAATTCCACAACTAGAGAGT +
Preference number: 6 (lower is better)
Translates to: MHFYLVHRHSCI*WLMTEIPQLES
Trigger: ACTCTCTAGTTGTGGAATTTCAGTCATCAGCCAGCAGATGCAGGAGTGTCTATGAACCAGATAGAAATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000409579.5
ENST00000415384.2
ENST00000423966.6
ENST00000440445.6
ENST00000672047.1
ENST00000672197.1
ENST00000672269.1
ENST00000673232.1
ENST00000673328.1
CDS CCA 72 bp CATTTCTATCTGGTTCATAGACACTCCTGCATCTGCTaGCTGATGACTGAAATTCCACAACTAGAGAGTCAT +
Preference number: 6 (lower is better)
Translates to: HFYLVHRHSCIC*LMTEIPQLESH
Trigger: ATGACTCTCTAGTTGTGGAATTTCAGTCATCAGCCAGCAGATGCAGGAGTGTCTATGAACCAGATAGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000409579.5
ENST00000415384.2
ENST00000423966.6
ENST00000440445.6
ENST00000672047.1
ENST00000672197.1
ENST00000672269.1
ENST00000673232.1
ENST00000673328.1
CDS CAA 72 bp TTATTTATTGGTATTGCCACACTGTTGATGTTCATGTaGCAGTGGTTTGCAGACAAAGTATTACTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: LFIGIATLLMFM*QWFADKVLLVE
Trigger: CTCCACCAGTAATACTTTGTCTGCAAACCACTGCAACATGAACATCAACAGTGTGGCAATACCAATAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS CAA 72 bp TTGTTAGTCTGGAGAAAGAAAAACACATCCACGCTATaGTTAGAGACAACAGAAACACCGGAGATAATCAAC +
Preference number: 6 (lower is better)
Translates to: LLVWRKKNTSTL*LETTETPEIIN
Trigger: GTTGATTATCTCCGGTGTTTCTGTTGTCTCTAACAATAGCGTGGATGTGTTTTTCTTTCTCCAGACTAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498090.1