RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AFF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000144218

Ensembl transcript IDs: ENST00000317233.8, ENST00000409236.6, ENST00000409579.5, ENST00000415384.2, ENST00000416492.5, ENST00000423966.6, ENST00000424600.5, ENST00000427118.1, ENST00000430789.1, ENST00000432037.5, ENST00000440445.6, ENST00000441400.5, ENST00000445815.2, ENST00000483600.1, ENST00000498090.1, ENST00000671937.1, ENST00000672047.1, ENST00000672197.1, ENST00000672204.1, ENST00000672269.1, ENST00000672756.2, ENST00000672822.1, ENST00000672857.1, ENST00000672999.1, ENST00000673232.1, ENST00000673328.1, ENST00000673529.1, ENST00000683540.1

Found 2146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGTGGGCGCTGTTCCGCAGCCAGTGCAGGCCCTGTTGGGAGTACTaGACCAGGTGCTCCATGCTGCTGTGCAGGGTGACCGGCCCCATG +
Preference number: 1 (lower is better)
Translates to: RWALFRSQCRPCWEY*TRCSMLLCRVTGPM
Trigger: CATGGGGCCGGTCACCCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTCCCAACAGGGCCTGCACTGGCTGCGGAACAGCGCCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR CCA 90 bp CCCTATGACAGGTGGGCGCTGTTCCGCAGCCAGTGCAGGCCCTGTTaGGAGTACTGGACCAGGTGCTCCATGCTGCTGTGCAGGGTGACC +
Preference number: 1 (lower is better)
Translates to: PYDRWALFRSQCRPC*EYWTRCSMLLCRVT
Trigger: GGTCACCCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTCCCAACAGGGCCTGCACTGGCTGCGGAACAGCGCCCACCTGTCATAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR GCA 90 bp TGCAGGCCCTGTTGGGAGTACTGGACCAGGTGCTCCATGCTGCTGTaGAGGGTGACCGGCCCCATGAGCAGATCCAGGTCGTTGAAGAAT +
Preference number: 1 (lower is better)
Translates to: CRPCWEYWTRCSMLL*RVTGPMSRSRSLKN
Trigger: ATTCTTCAACGACCTGGATCTGCTCATGGGGCCGGTCACCCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTCCCAACAGGGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR CCA 90 bp CGAGGCATATCATCGAAGACAAGTTTCTGCCTCTTGCAGTCCCTGTaGCCGTTGGAGCCTGGAGACCACGGCTTCGTCTGCGGCCGTGAC +
Preference number: 1 (lower is better)
Translates to: RGISSKTSFCLLQSL*PLEPGDHGFVCGRD
Trigger: GTCACGGCCGCAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAGGCAGAAACTTGTCTTCGATGATATGCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR TCA 90 bp CCTGTGGCCGTTGGAGCCTGGAGACCACGGCTTCGTCTGCGGCCGTaGCTTGTGGAGGGGAATGTTTTCAGAATTGTTGTGAGCTGCTTT +
Preference number: 1 (lower is better)
Translates to: PVAVGAWRPRLRLRP*LVEGNVFRIVVSCF
Trigger: AAAGCAGCTCACAACAATTCTGAAAACATTCCCCTCCACAAGTCACGGCCGCAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR GCA 90 bp AATCGGCACTGCGAGGCATATCATCGAAGACAAGTTTCTGCCTCTTaGAGTCCCTGTGGCCGTTGGAGCCTGGAGACCACGGCTTCGTCT +
Preference number: 1 (lower is better)
Translates to: NRHCEAYHRRQVSAS*SPCGRWSLETTASS
Trigger: AGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAGGCAGAAACTTGTCTTCGATGATATGCCTCGCAGTGCCGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR TCA 90 bp AGCGGCATCCCAGGGCTACTGGTTGAACAGGAACCCTGTGGCCATTaGGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACTGGGACAC +
Preference number: 1 (lower is better)
Translates to: SGIPGLLVEQEPCGH*DDLLKLPVEPSLGH
Trigger: GTGTCCCAGTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCTGTTCAACCAGTAGCCCTGGGATGCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR TCA 90 bp TGCTGGGCTTTAAGCCAGTTGATACCACAGTGGCTGGCGCAACTCTaGAGTGTGCATGTTCAGAGTCCTGAGTCCCTAGACCCTGGGCAT +
Preference number: 1 (lower is better)
Translates to: CWALSQLIPQWLAQL*SVHVQSPESLDPGH
Trigger: ATGCCCAGGGTCTAGGGACTCAGGACTCTGAACATGCACACTTCAGAGTTGCGCCAGCCACTGTGGTATCAACTGGCTTAAAGCCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CCA 90 bp TCAGTGGTTGGTGAAGCAAAGCCAAGTTCCTGTCCCACCCATCTCTaGGATGAGGAGTTCTCCATGGTGACCCTGAGTCAGGCTTCTTCT +
Preference number: 1 (lower is better)
Translates to: SVVGEAKPSSCPTHL*DEEFSMVTLSQASS
Trigger: AGAAGAAGCCTGACTCAGGGTCACCATGGAGAACTCCTCATCCCAGAGATGGGTGGGACAGGAACTTGGCTTTGCTTCACCAACCACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR GCA 90 bp GAGTTCTCCATGGTGACCCTGAGTCAGGCTTCTTCTGCACCCCTCTaGCTGGTTAATGAGGACTCAACTGAACTGCCCATCTGCAAACAA +
Preference number: 1 (lower is better)
Translates to: EFSMVTLSQASSAPL*LVNEDSTELPICKQ
Trigger: TTGTTTGCAGATGGGCAGTTCAGTTGAGTCCTCATTAACCAGGCAGAGGGGTGCAGAAGAAGCCTGACTCAGGGTCACCATGGAGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR TCA 90 bp CCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATaGAACAAGACAGTCATAAGAACTACACGCTCTGACCACTGCCCA +
Preference number: 1 (lower is better)
Translates to: PQKLLYQRAPHVLHR*NKTVIRTTRSDHCP
Trigger: TGGGCAGTGGTCAGAGCGTGTAGTTCTTATGACTGTCTTGTTTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR TCA 90 bp TCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTGCTTaGTCCTACTTGACTCCAGGCCCTTCCTGCTGGGCTTTAAGCCAG +
Preference number: 1 (lower is better)
Translates to: SSCTEETFHFSTTFA*SYLTPGPSCWALSQ
Trigger: CTGGCTTAAAGCCCAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR GCA 90 bp CATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATaGATGTGGCTGGTGGGCTTGTTATCACAGGTGCAGAAAACTTCA +
Preference number: 1 (lower is better)
Translates to: HVALQPPSHSGRKKK*MWLVGLLSQVQKTS
Trigger: TGAAGTTTTCTGCACCTGTGATAACAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CCA 90 bp GCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTaGCTGGTGGGCTTGTTATCACAGGTGCAGAAAACTTCAACTCCT +
Preference number: 1 (lower is better)
Translates to: ALQPPSHSGRKKKCM*LVGLLSQVQKTSTP
Trigger: AGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CCA 90 bp GCAAGGTGTAAACATACCAGACACACAGGACACAGGAAGAGGCTCTaGTTGCTGCTGCCCCAGAAAGGAACTGTGATCTTCTGCATTGCA +
Preference number: 1 (lower is better)
Translates to: ARCKHTRHTGHRKRL*LLLPQKGTVIFCIA
Trigger: TGCAATGCAGAAGATCACAGTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTGGTATGTTTACACCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 90 bp CAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTaGTTGATCCTACTTGACTCCAGGCCCTTCCTGCTGGGCTTTAAG +
Preference number: 1 (lower is better)
Translates to: QFFLHRGNLPFLHNV*LILLDSRPFLLGFK
Trigger: CTTAAAGCCCAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CCA 90 bp AGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCTGGTaGGCTTGTTATCACAGGTGCAGAAAACTTCAACTCCTAACTGAG +
Preference number: 1 (lower is better)
Translates to: SHRVTVAGRRNACGW*ACYHRCRKLQLLTE
Trigger: CTCAGTTAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CCA 90 bp CCACTGCCCACAACGGTAAGTTTCAAGAAGTTTTCCTGGGAAATGTaGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAA +
Preference number: 1 (lower is better)
Translates to: PLPTTVSFKKFSWEM*AIRVLIKHCWPTCQ
Trigger: TTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCCCAGGAAAACTTCTTGAAACTTACCGTTGTGGGCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR TCA 90 bp TTCAAACAAGCCAACTTCCTAATTACAATGGAGAGGGAACTGGCATaGGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGC +
Preference number: 1 (lower is better)
Translates to: FKQANFLITMERELA*GSKLFPPFRQWAPG
Trigger: GCCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCCCTCTCCATTGTAATTAGGAAGTTGGCTTGTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR GCA 90 bp TTAACTTTCAAAGACGCCGCGTTTTTGCTAAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGGGCTGGGAAGGGCTGTGAGTGTCCA +
Preference number: 1 (lower is better)
Translates to: LTFKDAAFLLNLSAI*ILLGGGAGKGCECP
Trigger: TGGACACTCACAGCCCTTCCCAGCCCCACCTCCAAGTAGTATGCAAATGGCACTGAGATTTAGCAAAAACGCGGCGTCTTTGAAAGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 90 bp GCAGGAAGAAGAAATGCATGTGGCTGGTGGGCTTGTTATCACAGGTaGAGAAAACTTCAACTCCTAACTGAGCTCCAACACACAGGCACT +
Preference number: 1 (lower is better)
Translates to: AGRRNACGWWACYHR*RKLQLLTELQHTGT
Trigger: AGTGCCTGTGTGTTGGAGCTCAGTTAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGCCCACCAGCCACATGCATTTCTTCTTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 90 bp TCTGCAACTTTCAAGGTGGGCAGGACCAGAGAAGCTCTCCAGGTATaGAGGATAGACCTCCAGGGCCATCCCTTTATGTGTTTGAATATT +
Preference number: 1 (lower is better)
Translates to: SATFKVGRTREALQV*RIDLQGHPFMCLNI
Trigger: AATATTCAAACACATAAAGGGATGGCCCTGGAGGTCTATCCTGCATACCTGGAGAGCTTCTCTGGTCCTGCCCACCTTGAAAGTTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CCA 90 bp TACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCTaGTGGGCTTGTTATCACAGGTGCAGAAAACTTCAACTCCTAACT +
Preference number: 1 (lower is better)
Translates to: YSHRVTVAGRRNACG*WACYHRCRKLQLLT
Trigger: AGTTAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR TCA 90 bp CAGTGCCATTTGCATACTACTTGGAGGTGGGGCTGGGAAGGGCTGTaGGTGTCCATCTGTTTGCCTGGAATGCATTTAGTTGATAATAGA +
Preference number: 1 (lower is better)
Translates to: QCHLHTTWRWGWEGL*VSICLPGMHLVDNR
Trigger: TCTATTATCAACTAAATGCATTCCAGGCAAACAGATGGACACTCACAGCCCTTCCCAGCCCCACCTCCAAGTAGTATGCAAATGGCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR TCA 90 bp AATAGTCGATTAGTGCTTTTGAATACTTTACAGCGTGGTCCCTTTTaGGTCGAAACATCCGCCAGTACAGGAGGGCCAGGCATCGGTAAC +
Preference number: 1 (lower is better)
Translates to: NSRLVLLNTLQRGPF*VETSASTGGPGIGN
Trigger: GTTACCGATGCCTGGCCCTCCTGTACTGGCGGATGTTTCGACTCAAAAGGGACCACGCTGTAAAGTATTCAAAAGCACTAATCGACTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR GCA 90 bp TCGCCCCCAAATCAAAACGCATCAAAGGGCTGCAGGTGCACATTCTaGATGAGGAGTGAGAGAATCAGCATTATCATGGCAAATAGCTCT +
Preference number: 1 (lower is better)
Translates to: SPPNQNASKGCRCTF*MRSERISIIMANSS
Trigger: AGAGCTATTTGCCATGATAATGCTGATTCTCTCACTCCTCATGCAGAATGTGCACCTGCAGCCCTTTGATGCGTTTTGATTTGGGGGCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 90 bp TTCACAAGCAACAATTGGAGGATGGTTACTAACCAAAATCACCCATaGCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTG +
Preference number: 1 (lower is better)
Translates to: FTSNNWRMVTNQNHP*QTPQKLLYQRAPHV
Trigger: CACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTGATTTTGGTTAGTAACCATCCTCCAATTGTTGCTTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 90 bp CCCAAGTCCCTGATTCAGCTTTTCAGGCTACATCAATACCCCTGGTaGTTCAACACAAATGCTGACCCTTGTACTGACTGGCAATTAGTG +
Preference number: 1 (lower is better)
Translates to: PKSLIQLFRLHQYPW*FNTNADPCTDWQLV
Trigger: CACTAATTGCCAGTCAGTACAAGGGTCAGCATTTGTGTTGAAGCACCAGGGGTATTGATGTAGCCTGAAAAGCTGAATCAGGGACTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR TCA 90 bp GTAAGAAAGCTATTGGTGGAAAGAAAAGACTTGAAACAGATTGGCTaGCAAATGCCATGTGGCTCTACAGCCACCGAGTCACAGTGGCAG +
Preference number: 1 (lower is better)
Translates to: VRKLLVERKDLKQIG*QMPCGSTATESQWQ
Trigger: CTGCCACTGTGACTCGGTGGCTGTAGAGCCACATGGCATTTGTCAGCCAATCTGTTTCAAGTCTTTTCTTTCCACCAATAGCTTTCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR TCA 90 bp CGTGCTCCACAGATGAAACAAGACAGTCATAAGAACTACACGCTCTaGCCACTGCCCACAACGGTAAGTTTCAAGAAGTTTTCCTGGGAA +
Preference number: 1 (lower is better)
Translates to: RAPQMKQDSHKNYTL*PLPTTVSFKKFSWE
Trigger: TTCCCAGGAAAACTTCTTGAAACTTACCGTTGTGGGCAGTGGTCAGAGCGTGTAGTTCTTATGACTGTCTTGTTTCATCTGTGGAGCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR TCA 90 bp AGACTTCAGCTGTGTAGCAGGCAAAGCTACAGAAGAGAACGTTCTTaGAAGACTGCTGGGTGTTTCTTAGCACAAACCACCTCTGAAAGA +
Preference number: 1 (lower is better)
Translates to: RLQLCSRQSYRRERS*KTAGCFLAQTTSER
Trigger: TCTTTCAGAGGTGGTTTGTGCTAAGAAACACCCAGCAGTCTTTCAAGAACGTTCTCTTCTGTAGCTTTGCCTGCTACACAGCTGAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR GCA 90 bp GGGGCCTTGTTCCATTGCATTTCCACACTCGATAAACGACAATGCTaGTTCAGCATAGTTCAAAGCCTTTCCAAACTTTTCCACCATTGC +
Preference number: 1 (lower is better)
Translates to: GALFHCISTLDKRQC*FSIVQSLSKLFHHC
Trigger: GCAATGGTGGAAAAGTTTGGAAAGGCTTTGAACTATGCTGAAGCAGCATTGTCGTTTATCGAGTGTGGAAATGCAATGGAACAAGGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR CCA 90 bp AAACCCAAGTCCCTGATTCAGCTTTTCAGGCTACATCAATACCCCTaGTGCTTCAACACAAATGCTGACCCTTGTACTGACTGGCAATTA +
Preference number: 1 (lower is better)
Translates to: KPKSLIQLFRLHQYP*CFNTNADPCTDWQL
Trigger: TAATTGCCAGTCAGTACAAGGGTCAGCATTTGTGTTGAAGCACCAGGGGTATTGATGTAGCCTGAAAAGCTGAATCAGGGACTTGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR GCA 90 bp AAGACTAAAAATGAAGTTAACAAACTTACCCTCCCACATAGGGGATaGTTCATGTCAAGCCACTGGTCTAATGCCTCCGTCTTCTTTAGT +
Preference number: 1 (lower is better)
Translates to: KTKNEVNKLTLPHRG*FMSSHWSNASVFFS
Trigger: ACTAAAGAAGACGGAGGCATTAGACCAGTGGCTTGACATGAAGCATCCCCTATGTGGGAGGGTAAGTTTGTTAACTTCATTTTTAGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR CCA 90 bp AGATTTTGGTTGAATTTTCTAAGAAGTCACGGTTTAGCACTGGAATaGAATAGAAAGTGTGTGTCTGTGATTGTGTGTGAGTGTACGGTG +
Preference number: 1 (lower is better)
Translates to: RFWLNFLRSHGLALE*NRKCVSVIVCECTV
Trigger: CACCGTACACTCACACACAATCACAGACACACACTTTCTATTCCATTCCAGTGCTAAACCGTGACTTCTTAGAAAATTCAACCAAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR CCA 90 bp AACATCGTGATAAAGGATAGCATCTATTCAGGTCATGGAAGGATATaGTCAGTTGAACTTGTGTTGAACTTTGGAGGCAAATGTACGTCT +
Preference number: 1 (lower is better)
Translates to: NIVIKDSIYSGHGRI*SVELVLNFGGKCTS
Trigger: AGACGTACATTTGCCTCCAAAGTTCAACACAAGTTCAACTGACCATATCCTTCCATGACCTGAATAGATGCTATCCTTTATCACGATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CCA 90 bp CCAAGCAAACAAGTTAACCCCTTTGGTGACATATACAGAATAATCTaGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCT +
Preference number: 1 (lower is better)
Translates to: PSKQVNPFGDIYRII*TKGTQISSLNISCA
Trigger: AGCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTGTATATGTCACCAAAGGGGTTAACTTGTTTGCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR GCA 90 bp AATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTaGTATTTGCCAGGAAGTTGTAATATTGAAAAACTGTGCTCTTCT +
Preference number: 1 (lower is better)
Translates to: NLDKGNTNLKSEHFL*YLPGSCNIEKLCSS
Trigger: AGAAGAGCACAGTTTTTCAATATTACAACTTCCTGGCAAATAGCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGGGCCCACCTGTCAAATaGGGCTTCACAGGGAAGCTC +
Preference number: 2 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQGPPVK*GFTGKL
Trigger: GAGCTTCCCTGTGAAGCCCCATTTGACAGGTGGGCC...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGACTGCTGTACCAACGTaGTCCACACGTGCTCCACAG +
Preference number: 2 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQTAVPT*STRAPQ
Trigger: CTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGT...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCACAGGGCGCTGGCGTTaGAGAGGCTGCCCTGAGACC +
Preference number: 2 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGTGRWR*RGCPET
Trigger: GGTCTCAGGGCAGCCTCTCCAACGCCAGCGCCCTGT...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR CAA 90 bp ATATCATCGAAGACAAGTTTCTGCCTCTTGCAGTCCCTGTGGCCGTaGGAGCCTGGAGACCACGGCTTCGTCTGCGGCCGTGACTTGTGG +
Preference number: 2 (lower is better)
Translates to: ISSKTSFCLLQSLWP*EPGDHGFVCGRDLW
Trigger: CCACAAGTCACGGCCGCAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAGGCAGAAACTTGTCTTCGATGATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCTTGGTGATGCTGACGTaGTTGGCCGCCATCTGGTGG +
Preference number: 2 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLLVMLT*LAAIWW
Trigger: CCACCAGATGGCGGCCAACCACGTCAGCATCACCAA...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR TCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGATTGGAGAGGCTGCCCTaGGACCCCACGGAGTTTCCA +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGLERLP*DPTEFP
Trigger: TGGAAACTCCGTGGGGTCTCAGGGCAGCCTCTCCAA...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR GCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACCTGTTCCGCAGCCAGTaGAGGCCCTGTTGGGAGTAC +
Preference number: 2 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNLFRSQ*RPCWEY
Trigger: GTACTCCCAACAGGGCCTGCACTGGCTGCGGAACAG...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCTGGTTGGCCGCCATCTaGTGGATGCGCTGTGGGATG +
Preference number: 2 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGWLAAI*WMRCGM
Trigger: CATCCCACAGCGCATCCACCAGATGGCGGCCAACCA...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR TCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATACTCTGGCCCCAGGGTaGGGTCCCTATGACAGGTGG +
Preference number: 2 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYTLAPG*GPYDRW
Trigger: CCACCTGTCATAGGGACCTCACCCTGGGGCCAGAGT...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR GCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGGCAGGAAGAAGAAATaGATGTGGCTGGTGGGCTTG +
Preference number: 2 (lower is better)
Translates to: QTHRTQEEALVAAAPERNGRKKK*MWLVGL
Trigger: CAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGGTGCTGATAAAACACTaGTGGCCCACCTGTCAAATG +
Preference number: 2 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQVLIKH*WPTCQM
Trigger: CATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCAC...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCTGCAGACTGAATGCTaGTGCATCCCAGGGCTCAGA +
Preference number: 2 (lower is better)
Translates to: PGRVPLGDHSSSCTEETFLQTEC*CIPGLR
Trigger: TCTGAGCCCTGGGATGCAGCAGCATTCAGTCTGCAG...GAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR TCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACAGTGTCCAAAAACGTTaGGCCATCTGTGGAGACCAG +
Preference number: 2 (lower is better)
Translates to: QTHRTQEEALVAAAPERNSVQKR*AICGDQ
Trigger: CTGGTCTCCACAGATGGCTCAACGTTTTTGGACACT...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCAGTGTCCAAAAACGTTaGGCCATCTGTGGAGACCAG +
Preference number: 2 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLSVQKR*AICGDQ
Trigger: CTGGTCTCCACAGATGGCTCAACGTTTTTGGACACT...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCACTTCAACTCCTAACTaGGCTCCAACACACAGGCAC +
Preference number: 2 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLTSTPN*APTHRH
Trigger: GTGCCTGTGTGTTGGAGCTCAGTTAGGAGTTGAAGT...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp GGGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGTTGCTTGATCCTACTTaGCTCCAGGCCCTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: GNWHEEASYFHHSGSGLQLLDPT*LQALPA
Trigger: AGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAA...CTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR TCA 90 bp GGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGTCCCAGATGAAGAGCTaGTTCCTTCCCAGGAGCATC +
Preference number: 2 (lower is better)
Translates to: GTGMRKQVISTIPAVGSRSQMKS*FLPRSI
Trigger: GATGCTCCTGGGAAGGAATCAGCTCTTCATCTGGGA...CCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR TCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGACAGCGTGGTCCCTTTTaGGTCGAAACATCCGCCAGT +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGQRGPF*VETSAS
Trigger: ACTGGCGGATGTTTCGACTCAAAAGGGACCACGCTG...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR GCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAACCAAAATCACCCATaGCAAACCCCACAGAAACTG +
Preference number: 2 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQNQNHP*QTPQKL
Trigger: CAGTTTCTGTGGGGTTTGGCATGGGTGATTTTGGTT...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CCCTTCCTGCTGGGCTTTAAGCCAGTTGATACCACAGTGGCTGGCGCAACTCTGGAAAATGCTCTGAAGTaGTGGTCTTGGCCAGGCAAG +
Preference number: 2 (lower is better)
Translates to: PFLLGFKPVDTTVAGATLENALK*WSWPGK
Trigger: CTTGCCTGGCCAAGACCAGCACTTCAGAGCATTTTC...CAGAGTTGCGCCAGCCACTGTGGTATCAACTGGCTTAAAGCCCAGCAGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR GCA 90 bp TTTCTCCACAACGTTTGCTTGATCCTACTTGACTCCAGGCCCTTCCTGCTGGGCCATCTGCAGACTGAATaGTGCTGCATCCCAGGGCTC +
Preference number: 2 (lower is better)
Translates to: FLHNVCLILLDSRPFLLGHLQTE*CCIPGL
Trigger: GAGCCCTGGGATGCAGCAGCATTCAGTCTGCAGATG...GCCCAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACACGTTGAGCCATCTGTaGAGACCAGAGCCCACTCTG +
Preference number: 2 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNTLSHL*RPEPTL
Trigger: CAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGT...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTGGTTTAGCACTGGAATaGAATAGAAAGTGTGTGTCT +
Preference number: 2 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGGLALE*NRKCVS
Trigger: AGACACACACTTTCTATTCCATTCCAGTGCTAAACC...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp TTTCTCCACAACGTTTGCTTGATCCTACTTGACTCCAGGCCCTTCCTGCTGGGCTGGCTGGCGCAACTCTaGAGTGTGCATGTTCAGAGT +
Preference number: 2 (lower is better)
Translates to: FLHNVCLILLDSRPFLLGWLAQL*SVHVQS
Trigger: ACTCTGAACATGCACACTTCAGAGTTGCGCCAGCCA...GCCCAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR GCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACAGATTGGCTGACAAATaGCATGTGGCTCTACAGCCA +
Preference number: 2 (lower is better)
Translates to: QTHRTQEEALVAAAPERNRLADK*HVALQP
Trigger: TGGCTGTAGAGCCACATGGCATTTGTCAGCCAATCT...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAGAAGCTCTCCAGGTATaGAGGATAGACCTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEEALQV*RIDLQG
Trigger: GCCCTGGAGGTCTATCCTGCATACCTGGAGAGCTTC...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGACATTTGCATACTACTTaGAGGTGGGGCTGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGHLHTT*RWGWEG
Trigger: CCCTTCCCAGCCCCACCTCCAAGTAGTATGCAAATG...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTTTCACAAGCAACAATTaGAGGATGGTTACTAACCAA +
Preference number: 2 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGFTSNN*RMVTNQ
Trigger: TTGGTTAGTAACCATCCTCCAATTGTTGCTTGTGAA...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCACAACACAGGGTTTCAATaGTCAGTGGAGCTGAGACAG +
Preference number: 2 (lower is better)
Translates to: GGLRTLTIMAEGEGEARHNTGFQ*SVELRQ
Trigger: CTGTCTCAGCTCCACTGACCATTGAAACCCTGTGTT...GTGCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
3UTR-3UTR CCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCTGGTGGATGCGCTGTaGGATGCTGACGATGGTCGA +
Preference number: 2 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYLVDAL*DADDGR
Trigger: TCGACCATCGTCAGCATCCCACAGCGCATCCACCAG...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR TCA 90 bp GGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGTCTATGAAAATGCTCTaGAGTGCTGGTCTTGGCCAG +
Preference number: 2 (lower is better)
Translates to: GTGMRKQVISTIPAVGSRSMKML*SAGLGQ
Trigger: CTGGCCAAGACCAGCACTTCAGAGCATTTTCATAGA...CCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGCAGGAAGAAGAAATaGATGTGGCTGGTGGGCTTG +
Preference number: 2 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQGRKKK*MWLVGL
Trigger: CAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCC...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATAGAGGCTCTGGTTGCTaGTGCCCCAGAAAGGAACTG +
Preference number: 2 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYRGSGC*CPRKEL
Trigger: CAGTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCT...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAACATATTACACCGCCTaGCTTTCTCAGACCGTCCTG +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGTYYTA*LSQTVL
Trigger: CAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAACGTTGAGCCATCTGTaGAGACCAGAGCCCACTCTG +
Preference number: 2 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKTLSHL*RPEPTL
Trigger: CAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGT...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCCTTCTGGTGTGGCATTaGGGCCTGAGTGGGTTTTTA +
Preference number: 2 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGLLVWH*GLSGFL
Trigger: TAAAAACCCACTCAGGCCCCAATGCCACACCAGAAG...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR TCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGTGTCCAAAAACGTTaGGCCATCTGTGGAGACCAG +
Preference number: 2 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETSVQKR*AICGDQ
Trigger: CTGGTCTCCACAGATGGCTCAACGTTTTTGGACACT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAGGCGGGACAATCACTTaGACCCAGGAGGCAGAGGAT +
Preference number: 2 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVGGTIT*TQEAED
Trigger: ATCCTCTGCCTCCTGGGTTCAAGTGATTGTCCCGCC...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAGGAACTGTGATCTTCTaGATTGCAAGCAGCCTGCTA +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGGTVIF*IASSLL
Trigger: TAGCAGGCTGCTTGCAATGCAGAAGATCACAGTTCC...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTCCAGGAGGCAGAGGATaGAGTGAGCCGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIPGGRG*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCATCCTCTGCCTCCTGG...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGCCAGGAGGCAGAGGATaGAGTGAGCCGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQPGGRG*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCATCCTCTGCCTCCTGG...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAAGAAATGCATGTGGCTaGTGGGCTTGTTATCACAGG +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGRNACG*WACYHR
Trigger: CCTGTGATAACAAGCCCACCAGCCACATGCATTTCT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACAGACTTGAAACAGATTaGCTGACAAATGCCATGTGG +
Preference number: 2 (lower is better)
Translates to: QTHRTQEEALVAAAPERNRLETD*LTNAMW
Trigger: CCACATGGCATTTGTCAGCCAATCTGTTTCAAGTCT...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGAATCAGCATTATCATaGCAAATAGCTCTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLESALS*QIALSL
Trigger: CAGGCTGAGAGCTATTTGCCATGATAATGCTGATTC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATGGCCCACCTGTCAAATaGGGCTTCACAGGGAAGCTC +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHGPPVK*GFTGKL
Trigger: GAGCTTCCCTGTGAAGCCCCATTTGACAGGTGGGCC...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp AACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGCTCTGAGTCATGGGGAGTaGTCTTTGGGCTTTTCTCAA +
Preference number: 2 (lower is better)
Translates to: NWHEEASYFHHSGSGLQALSHGE*SLGFSQ
Trigger: TTGAGAAAAGCCCAAAGACCACTCCCCATGACTCAG...AGCCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR CCA 90 bp TTTCAAACAAGCCAACTTCCTAATTACAATGGAGAGGGAACTGGCATGAGGAAGCCACCATTCCGGCAGTaGGCTCCAGGCTCCCAGATG +
Preference number: 2 (lower is better)
Translates to: FQTSQLPNYNGEGTGMRKPPFRQ*APGSQM
Trigger: CATCTGGGAGCCTGGAGCCCACTGCCGGAATGGTGG...CTTCCTCATGCCAGTTCCCTCTCCATTGTAATTAGGAAGTTGGCTTGTTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CAA 90 bp TTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTGCTaGATCCTACTTGACTCCAGGCCCTTCCTGCTGGGCTTTAAGCCA +
Preference number: 2 (lower is better)
Translates to: FFLHRGNLPFLHNVC*ILLDSRPFLLGFKP
Trigger: TGGCTTAAAGCCCAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR TCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGGGCGGGACAATCACTTaGACCCAGGAGGCAGAGGAT +
Preference number: 2 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQGGTIT*TQEAED
Trigger: ATCCTCTGCCTCCTGGGTTCAAGTGATTGTCCCGCC...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGCTTGTTATCACAGGTaGAGAAAACTTCAACTCCTA +
Preference number: 2 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLACYHR*RKLQLL
Trigger: TAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGAACGCATCAAAGGGCTaGAGGTGCACATTCTGCATG +
Preference number: 2 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRNASKG*RCTFCM
Trigger: CATGCAGAATGTGCACCTGCAGCCCTTTGATGCGTT...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAGGAACTGTGATCTTCTaGATTGCAAGCAGCCTGCTA +
Preference number: 2 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEGTVIF*IASSLL
Trigger: TAGCAGGCTGCTTGCAATGCAGAAGATCACAGTTCC...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCTCTGGTTGCTaGTGCCCCAGAAAGGAACTG +
Preference number: 2 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVRGSGC*CPRKEL
Trigger: CAGTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCT...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAGTGCTGATAAAACACTaGTGGCCCACCTGTCAAATG +
Preference number: 2 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEVLIKH*WPTCQM
Trigger: CATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCAC...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCTTTCTCCACAACGTTTaGTTGATCCTACTTGACTCC +
Preference number: 2 (lower is better)
Translates to: PGRVPLGDHSSSCTEETFFLHNV*LILLDS
Trigger: GGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAA...GAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACGTTGAGCCATCTGTaGAGACCAGAGCCCACTCTG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLITLSHL*RPEPTL
Trigger: CAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGT...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACCAGGTCCATCTTCACTaGCAGTCAAGCTTTTGGTGT +
Preference number: 2 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHQVHLH*QSSFWC
Trigger: ACACCAAAAGCTTGACTGCCAGTGAAGATGGACCTG...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR CCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATAATGCATGTGGCTGGTaGGCTTGTTATCACAGGTGC +
Preference number: 2 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYNACGW*ACYHRC
Trigger: GCACCTGTGATAACAAGCCCACCAGCCACATGCATT...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACCTGACAAATGCCATGTaGCTCTACAGCCACCGAGTC +
Preference number: 2 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNLTNAM*LYSHRV
Trigger: GACTCGGTGGCTGTAGAGCCACATGGCATTTGTCAG...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTGTGGCCGTTGGAGCCTaGAGACCACGGCTTCGTCTG +
Preference number: 2 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLVAVGA*RPRLRL
Trigger: CAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCAC...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAGTTTGTCTTCTGGTGTaGCATTGGGGCCTGAGTGGG +
Preference number: 2 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVVCLLV*HWGLSG
Trigger: CCCACTCAGGCCCCAATGCCACACCAGAAGACAAAC...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR TCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACAGTGTCCAAAAACGTTaGGCCATCTGTGGAGACCAG +
Preference number: 2 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNSVQKR*AICGDQ
Trigger: CTGGTCTCCACAGATGGCTCAACGTTTTTGGACACT...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp GCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGAATATTTACAGAAGAGCATGTTCAGAGTCCTaGGTCCCTAGACCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: ANCEGSDSRASGRNIYRRACSES*VPRPWA
Trigger: TGCCCAGGGTCTAGGGACTCAGGACTCTGAACATGC...TCTTCTGTAAATATTCCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR TCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGATTGGGCGGCTTTAGATaGGTTCTTGAAATAGTCGAT +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGLGGFR*VLEIVD
Trigger: ATCGACTATTTCAAGAACTCATCTAAAGCCGCCCAA...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR GCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCAAACACACATGCCCTaGAAAAGATCATTGTTCAAT +
Preference number: 2 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLQTHMP*KRSLFN
Trigger: ATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTG...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTGGAAGAGGCTCTGGTTaGTGCTGCCCCAGAAAGGAA +
Preference number: 2 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIGRGSG*CCPRKE
Trigger: TTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCC...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCGGGGCCTTGTTCCATTaGATTTCCACACTCGATAAA +
Preference number: 2 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETGALFH*ISTLDK
Trigger: TTTATCGAGTGTGGAAATGCAATGGAACAAGGCCCC...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGACATTTGCATACTACTTaGAGGTGGGGCTGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: VRESALSWQIALSLVSEGHLHTT*RWGWEG
Trigger: CCCTTCCCAGCCCCACCTCCAAGTAGTATGCAAATG...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAAAGAAGAAATGCATGTaGCTGGTGGGCTTGTTATCA +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGKKKCM*LVGLLS
Trigger: TGATAACAAGCCCACCAGCCACATGCATTTCTTCTT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGACTGACAAATGCCATGTaGCTCTACAGCCACCGAGTC +
Preference number: 2 (lower is better)
Translates to: VRESALSWQIALSLVSEGLTNAM*LYSHRV
Trigger: GACTCGGTGGCTGTAGAGCCACATGGCATTTGTCAG...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTACTGACAAATGCCATGTaGCTCTACAGCCACCGAGTC +
Preference number: 2 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVLTNAM*LYSHRV
Trigger: GACTCGGTGGCTGTAGAGCCACATGGCATTTGTCAG...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTACTGCAACTTTCAAGGTaGGCAGGACCAGAGAAGCTC +
Preference number: 2 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVLQLSR*AGPEKL
Trigger: GAGCTTCTCTGGTCCTGCCCACCTTGAAAGTTGCAG...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTCTGATAAAACACTGCTaGCCCACCTGTCAAATGGGG +
Preference number: 2 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTLIKHC*PTCQMG
Trigger: CCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAG...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR CCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCACTCTTGCAGTCCCTGTaGCCGTTGGAGCCTGGAGAC +
Preference number: 2 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRALLQSL*PLEPGD
Trigger: GTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAG...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR TCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 2 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGGCGGGACAATCACTTaGACCCAGGAGGCAGAGGAT +
Preference number: 2 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIGGTIT*TQEAED
Trigger: ATCCTCTGCCTCCTGGGTTCAAGTGATTGTCCCGCC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCCCCAGGGCTACTGGTTaGACAGGAACCCTGTGGCCA +
Preference number: 2 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCPRATG*TGTLWP
Trigger: TGGCCACAGGGTTCCTGTTCAACCAGTAGCCCTGGG...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR TCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGTGCGCTGTGGGATGCTaGCGATGGTCGACGGGGACA +
Preference number: 2 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMCAVGC*RWSTGT
Trigger: TGTCCCCGTCGACCATCGTCAGCATCCCACAGCGCA...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR GCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAGGGTATTTGGTAACATaGAATCTAGTAAACTTCCGG +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGGYLVT*NLVNFR
Trigger: CCGGAAGTTTACTAGATTGCATGTTACCAAATACCC...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACGGGTATTTGGTAACATaGAATCTAGTAAACTTCCGG +
Preference number: 2 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNGYLVT*NLVNFR
Trigger: CCGGAAGTTTACTAGATTGCATGTTACCAAATACCC...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYNLSAI*ILLGGG
Trigger: CCCACCTCCAAGTAGTATGCAAATGGCACTGAGATT...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATTCAAAGGGCTGCAGGTaGACATTCTGCATGAGGAGT +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHSKGCR*TFCMRS
Trigger: ACTCCTCATGCAGAATGTGCACCTGCAGCCCTTTGA...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAATGTGATCTTCTGCATTaGAAGCAGCCTGCTAATCAA +
Preference number: 2 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQCDLLH*KQPANQ
Trigger: TTGATTAGCAGGCTGCTTGCAATGCAGAAGATCACA...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATAAACCCCACAGAAACTaGTGTACCAACGTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHKPHRN*CTNVLH
Trigger: GTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATATTTATGTCCTTGCATTCCCATCTGCGTaGCCTGGTAAGCTTCTCCAA +
Preference number: 2 (lower is better)
Translates to: VVFGLFSKEYTALDIYVLAFPSA*PGKLLQ
Trigger: TTGGAGAAGCTTACCAGGGCACGCAGATGGGAATGC...AAGGACATAAATATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR GCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGGACCACGGCTTCGTCTaGGGCCGTGACTTGTGGAGG +
Preference number: 2 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMDHGFV*GRDLWR
Trigger: CCTCCACAAGTCACGGCCGCAGACGAAGCCGTGGTC...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCAAATGCATGTGGCTGGTaGGCTTGTTATCACAGGTGC +
Preference number: 2 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSNACGW*ACYHRC
Trigger: GCACCTGTGATAACAAGCCCACCAGCCACATGCATT...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTCTGCAACTTTCAAGGTaGGCAGGACCAGAGAAGCTC +
Preference number: 2 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIILQLSR*AGPEKL
Trigger: GAGCTTCTCTGGTCCTGCCCACCTTGAAAGTTGCAG...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCAAAAATTAGCCGGGTGTaGTGGCACGTGCCTATCTTC +
Preference number: 2 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSKISRV*WHVPIF
Trigger: GAAGATAGGCACGTGCCACCACACCCGGCTAATTTT...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAACTTGTGTTGAACTTTaGAGGCAAATGTACGTCTTC +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGTCVEL*RQMYVF
Trigger: GAAGACGTACATTTGCCTCCAAAGTTCAACACAAGT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGAATATTTACAGAAGATTCCCAGGAGCATCCTaGGAGAGTGCCACTAGGAGA +
Preference number: 2 (lower is better)
Translates to: ANCEGSDSRASGRNIYRRFPGAS*ESATRR
Trigger: TCTCCTAGTGGCACTCTCCCAGGATGCTCCTGGGAA...TCTTCTGTAAATATTCCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CAA 90 bp CTTATTTGGAAATGGAAATTTGGTTGGTTCCACTTTGCCAGGTGCTaGAATAGCAGAAAGTGGTGGAAGCCAGGTCATCTCCTGTCGAGG +
Preference number: 2 (lower is better)
Translates to: LIWKWKFGWFHFARC*NSRKWWKPGHLLSR
Trigger: CCTCGACAGGAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTGGAACCAACCAAATTTCCATTTCCAAATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR TCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTACTTCAACTCCTAACTaGGCTCCAACACACAGGCAC +
Preference number: 2 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIITSTPN*APTHRH
Trigger: GTGCCTGTGTGTTGGAGCTCAGTTAGGAGTTGAAGT...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTGATTCAGGCTCCTACTaGAGGGACAATCTAGGTAAT +
Preference number: 2 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTDSGSY*RDNLGN
Trigger: ATTACCTAGATTGTCCCTTCAGTAGGAGCCTGAATC...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR GCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATTTTGGTGTGCTGTATTaGACCTGGTTAACTAACCCA +
Preference number: 2 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYFGVLY*TWLTNP
Trigger: TGGGTTAGTTAACCAGGTGCAATACAGCACACCAAA...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGGTATTTGGTAACATaGAATCTAGTAAACTTCCGG +
Preference number: 2 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQGYLVT*NLVNFR
Trigger: CCGGAAGTTTACTAGATTGCATGTTACCAAATACCC...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCGCTTGTTATCACAGGTaGAGAAAACTTCAACTCCTA +
Preference number: 2 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETACYHR*RKLQLL
Trigger: TAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGC...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAAGATTGGCTGACAAATaGCATGTGGCTCTACAGCCA +
Preference number: 2 (lower is better)
Translates to: VRESALSWQIALSLVSEGRLADK*HVALQP
Trigger: TGGCTGTAGAGCCACATGGCATTTGTCAGCCAATCT...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGAACGCATCAAAGGGCTaGAGGTGCACATTCTGCATG +
Preference number: 2 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQNASKG*RCTFCM
Trigger: CATGCAGAATGTGCACCTGCAGCCCTTTGATGCGTT...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATTGTGATCTTCTGCATTaGAAGCAGCCTGCTAATCAA +
Preference number: 2 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNCDLLH*KQPANQ
Trigger: TTGATTAGCAGGCTGCTTGCAATGCAGAAGATCACA...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAATGGGATTGTGAACTCTaGCAAAAATTAGTGAAAGGG +
Preference number: 2 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEWDCEL*QKLVKG
Trigger: CCCTTTCACTAATTTTTGGCAGAGTTCACAATCCCA...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAGGTTTAGCACTGGAATaGAATAGAAAGTGTGTGTCT +
Preference number: 2 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEGLALE*NRKCVS
Trigger: AGACACACACTTTCTATTCCATTCCAGTGCTAAACC...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATAGAAATGCATGTGGCTaGTGGGCTTGTTATCACAGG +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHRNACG*WACYHR
Trigger: CCTGTGATAACAAGCCCACCAGCCACATGCATTTCT...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGGTAATCACAACACTTTaGGAGGTGGAGGCGGGTAGA +
Preference number: 2 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQVITTL*EVEAGR
Trigger: TCTACCCGCCTCCACCTCCCAAAGTGTTGTGATTAC...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGATTCACAAGCAACAATTaGAGGATGGTTACTAACCAA +
Preference number: 2 (lower is better)
Translates to: QSADKTLLAHLSNGASQGFTSNN*RMVTNQ
Trigger: TTGGTTAGTAACCATCCTCCAATTGTTGCTTGTGAA...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATGCATTGGGGCCTGAGTaGGTTTTTAGTCTCATAGCA +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHALGPE*VFSLIA
Trigger: TGCTATGAGACTAAAAACCCACTCAGGCCCCAATGC...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR TCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATCTGCTAATCAAAGCCTaGAAAATCGCCCCCAAATCA +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHLLIKA*KIAPKS
Trigger: TGATTTGGGGGCGATTTTTCAGGCTTTGATTAGCAG...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTCCCAGAAAGGAACTGTaGTCTTCTGCATTGCAAGCA +
Preference number: 2 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIPRKEL*SSALQA
Trigger: TGCTTGCAATGCAGAAGATCACAGTTCCTTTCTGGG...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACCCAGAACAACTGACTTaGACGTATTTTGATTCTCAA +
Preference number: 2 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHPEQLT*TYFDSQ
Trigger: TTGAGAATCAAAATACGTTCAAGTCAGTTGTTCTGG...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR TCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGCTTCGTCTGCGGCCGTaGCTTGTGGAGGGGAATGTT +
Preference number: 2 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMLRLRP*LVEGNV
Trigger: AACATTCCCCTCCACAAGTCACGGCCGCAGACGAAG...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR TCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGAGCTCTACTGTTTCTaGATACATCGTATAAGGAGA +
Preference number: 2 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNELYCF*IHRIRR
Trigger: TCTCCTTATACGATGTATTCAGAAACAGTAGAGCTC...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR GCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGTGCAGGTGCACATTCTaGATGAGGAGTGAGAGAATC +
Preference number: 2 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQCRCTF*MRSERI
Trigger: GATTCTCTCACTCCTCATGCAGAATGTGCACCTGCA...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAACGTTGAGCCATCTGTaGAGACCAGAGCCCACTCTG +
Preference number: 2 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSTLSHL*RPEPTL
Trigger: CAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGT...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGAGGAGTACACCGCACTaGATATTTATGTCCTTAGTT +
Preference number: 2 (lower is better)
Translates to: LGDHSSSCTEETFHFSTTRSTPH*IFMSLV
Trigger: AACTAAGGACATAAATATCCAGTGCGGTGTACTCCT...CGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR CCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTCAGTGCAGGCCCTGTTaGGAGTACTGGACCAGGTGC +
Preference number: 2 (lower is better)
Translates to: RISVNVYGSASSLSILCRQCRPC*EYWTRC
Trigger: GCACCTGGTCCAGTACTCCCAACAGGGCCTGCACTG...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR TCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCAGTGTCCAAAAACGTTaGGCCATCTGTGGAGACCAG +
Preference number: 2 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCSVQKR*AICGDQ
Trigger: CTGGTCTCCACAGATGGCTCAACGTTTTTGGACACT...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 2 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCTTGTGTGCAGTTCCCTaGCTGCACACAAGTCAGGGA +
Preference number: 2 (lower is better)
Translates to: PKPWADVISLRTEFIIFLLCAVP*LHTSQG
Trigger: TCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAA...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR GCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTGGGTATTTGGTAACATaGAATCTAGTAAACTTCCGG +
Preference number: 2 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTGYLVT*NLVNFR
Trigger: CCGGAAGTTTACTAGATTGCATGTTACCAAATACCC...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTAAACCCCACAGAAACTaGTGTACCAACGTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIKPHRN*CTNVLH
Trigger: GTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTTGCAGAAAGTCTCATTaGATTGCATTCCATGTGTTC +
Preference number: 2 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTCRKSH*IAFHVF
Trigger: GAACACATGGAATGCAATGCAATGAGACTTTCTGCA...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR GCA 90 bp TTTCAAACAAGCCAACTTCCTAATTACAATGGAGAGGGAACTGGCATGAGGAAGGACCACAGTTCTTCCTaGACAGAGGAAACCTTCCAT +
Preference number: 2 (lower is better)
Translates to: FQTSQLPNYNGEGTGMRKDHSSS*TEETFH
Trigger: ATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTC...CTTCCTCATGCCAGTTCCCTCTCCATTGTAATTAGGAAGTTGGCTTGTTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR CCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAAATGCATGTGGCTGGTaGGCTTGTTATCACAGGTGC +
Preference number: 2 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRANACGW*ACYHRC
Trigger: GCACCTGTGATAACAAGCCCACCAGCCACATGCATT...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCAAGACTTGAAACAGATTaGCTGACAAATGCCATGTGG +
Preference number: 2 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSRLETD*LTNAMW
Trigger: CCACATGGCATTTGTCAGCCAATCTGTTTCAAGTCT...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCTGTCCCACCCATCTCTaGGATGAGGAGTTCTCCATG +
Preference number: 2 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCCPTHL*DEEFSM
Trigger: CATGGAGAACTCCTCATCCCAGAGATGGGTGGGACA...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR CAA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTaGTCTAGCCTGGGATTATGGAAACTAGACAAAGAAGGTGTGTTC +
Preference number: 2 (lower is better)
Translates to: CVCVCTSSSQKPLIT*SSLGLWKLDKEGVF
Trigger: GAACACACCTTCTTTGTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR CAA 90 bp AATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAGGGTATTaGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGG +
Preference number: 2 (lower is better)
Translates to: NRVRWGKGIRGRAGY*VTCNLVNFRHKNTW
Trigger: CCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCCTGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAGTGCCGTCATCACCTTaGAAAAATGGATTGCACCAC +
Preference number: 2 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAVPSSP*KNGLHH
Trigger: GTGGTGCAATCCATTTTTTCAAGGTGATGACGGCAC...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGAAGAACTACACGCTCTaGCCACTGCCCACAACGGTA +
Preference number: 2 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMKNYTL*PLPTTV
Trigger: TACCGTTGTGGGCAGTGGTCAGAGCGTGTAGTTCTT...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCAAAGGATATGGTCAGTTaGACTTGTGTTGAACTTTGG +
Preference number: 2 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSKDMVS*TCVELW
Trigger: CCAAAGTTCAACACAAGTTCAACTGACCATATCCTT...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACCAAACACACATGCCCTaGAAAAGATCATTGTTCAAT +
Preference number: 2 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNQTHMP*KRSLFN
Trigger: ATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTG...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATTGGGATTGTGAACTCTaGCAAAAATTAGTGAAAGGG +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHWDCEL*QKLVKG
Trigger: CCCTTTCACTAATTTTTGGCAGAGTTCACAATCCCA...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp AATGCAGCCAGTTGTTTGTCTTCTGGTGTGGCATTGGGGCCTGAGTGGGTTTTTATTGCATCTGCTTTATaGTTCATTCGTTTAGCTTCT +
Preference number: 2 (lower is better)
Translates to: NAASCLSSGVALGPEWVFIASAL*FIRLAS
Trigger: AGAAGCTAAACGAATGAAGCATAAAGCAGATGCAAT...AAAAACCCACTCAGGCCCCAATGCCACACCAGAAGACAAACAACTGGCTGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR GCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATAAACTTTTCCACCATTaGATCTGCTTTATGCTTCAT +
Preference number: 2 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYKLFHH*ICFMLH
Trigger: ATGAAGCATAAAGCAGATGCAATGGTGGAAAAGTTT...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAGGTTTAGCACTGGAATaGAATAGAAAGTGTGTGTCT +
Preference number: 2 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVGLALE*NRKCVS
Trigger: AGACACACACTTTCTATTCCATTCCAGTGCTAAACC...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGCATTTGCATACTACTTaGAGGTGGGGCTGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMHLHTT*RWGWEG
Trigger: CCCTTCCCAGCCCCACCTCCAAGTAGTATGCAAATG...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATAAGAAGCACCCCAGTTaGAGACATGTAAAATGGAAA +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHKKHPS*RHVKWK
Trigger: TTTCCATTTTACATGTCTCCAACTGGGGTGCTTCTT...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGGTTTCTGACATAGGATaGGATTGTGAACTCTGCCAA +
Preference number: 2 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQVSDIG*DCELCQ
Trigger: TTGGCAGAGTTCACAATCCCATCCTATGTCAGAAAC...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCAGCAACAATTGGAGGATaGTTACTAACCAAAATCACC +
Preference number: 2 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSATIGG*LLTKIT
Trigger: GGTGATTTTGGTTAGTAACCATCCTCCAATTGTTGC...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 2 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCATGGGCTGGATCAGGTaGAGGGATGGTTTTGCTTTT +
Preference number: 2 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCMGWIR*RDGFAF
Trigger: AAAAGCAAAACCATCCCTTCACCTGATCCAGCCCAT...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR GCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTGCTTGTTATCACAGGTaGAGAAAACTTCAACTCCTA +
Preference number: 2 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIACYHR*RKLQLL
Trigger: TAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGC...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTGGCAGGAAGAAGAAATaGATGTGGCTGGTGGGCTTG +
Preference number: 2 (lower is better)
Translates to: RISVNVYGSASSLSILCRGRKKK*MWLVGL
Trigger: CAAGCCCACCAGCCACATGCATTTCTTCTTCCTGCC...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGACATATTACACCGCCTaGCTTTCTCAGACCGTCCTG +
Preference number: 2 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMTYYTA*LSQTVL
Trigger: CAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGAATATTTACAGAAGACCCACTAGAAATGCCTaGATGAGTGAAACATATTCC +
Preference number: 2 (lower is better)
Translates to: ANCEGSDSRASGRNIYRRPTRNA*MSETYS
Trigger: GGAATATGTTTCACTCATGCAGGCATTTCTAGTGGG...TCTTCTGTAAATATTCCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR GCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGCTCGATAAACGACAATaGTGCTTCAGCATAGTTCAA +
Preference number: 2 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQLDKRQ*CFSIVQ
Trigger: TTGAACTATGCTGAAGCAGCATTGTCGTTTATCGAG...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATaGAAACTAGACAAAGAAGGT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLSSLGL*KLDKEG
Trigger: ACCTTCTTTGTCTAGTTTCCATAATCCCAGGCTAGA...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCCAGGTCCATCTTCACTaGCAGTCAAGCTTTTGGTGT +
Preference number: 2 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCQVHLH*QSSFWC
Trigger: ACACCAAAAGCTTGACTGCCAGTGAAGATGGACCTG...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR CCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGGTAATCACAACACTTTaGGAGGTGGAGGCGGGTAGA +
Preference number: 2 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMVITTL*EVEAGR
Trigger: TCTACCCGCCTCCACCTCCCAAAGTGTTGTGATTAC...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATTTCACAAGCAACAATTaGAGGATGGTTACTAACCAA +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHFTSNN*RMVTNQ
Trigger: TTGGTTAGTAACCATCCTCCAATTGTTGCTTGTGAA...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CAA 90 bp CTTTTCCACCATTGCATCTGCTTTATGCTTCATTCGTTTAGCTTCTaGCATAAAATAATCGGCACTGCGAGGCATATCATCGAAGACAAG +
Preference number: 2 (lower is better)
Translates to: LFHHCICFMLHSFSF*HKIIGTARHIIEDK
Trigger: CTTGTCTTCGATGATATGCCTCGCAGTGCCGATTATTTTATGCAAGAAGCTAAACGAATGAAGCATAAAGCAGATGCAATGGTGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCAAACACACATGCCCTaGAAAAGATCATTGTTCAAT +
Preference number: 2 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSQTHMP*KRSLFN
Trigger: ATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTG...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: PKPWADVISLRTEFIIFLNLSAI*ILLGGG
Trigger: CCCACCTCCAAGTAGTATGCAAATGGCACTGAGATT...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR GCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAAGATTGGCTGACAAATaGCATGTGGCTCTACAGCCA +
Preference number: 2 (lower is better)
Translates to: MRISFSAESLIALHSMCSRLADK*HVALQP
Trigger: TGGCTGTAGAGCCACATGGCATTTGTCAGCCAATCT...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATCTTAATATTTCCAAATaGTTGAAGGCCAAAGCCAAA +
Preference number: 2 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHLNISK*LKAKAK
Trigger: TTTGGCTTTGGCCTTCAAGCATTTGGAAATATTAAG...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTTGTTACAACAAAGTCTaGAACTTTCAAGGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: FQMLEGQSQMQIPQALLICYNKV*NFQGGQ
Trigger: CTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACA...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCACAGGTCCATCTTCACTaGCAGTCAAGCTTTTGGTGT +
Preference number: 2 (lower is better)
Translates to: MRISFSAESLIALHSMCSQVHLH*QSSFWC
Trigger: ACACCAAAAGCTTGACTGCCAGTGAAGATGGACCTG...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGAATCAGCATTATCATaGCAAATAGCTCTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIESALS*QIALSL
Trigger: CAGGCTGAGAGCTATTTGCCATGATAATGCTGATTC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCTTTTCCTGGGAAATGTaGGCCATCAGAGTGCTGATA +
Preference number: 2 (lower is better)
Translates to: PKPWADVISLRTEFIIFLFSWEM*AIRVLI
Trigger: TATCAGCACTCTGATGGCCCACATTTCCCAGGAAAA...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR CCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGAAAATTAGCCGGGTGTaGTGGCACGTGCCTATCTTC +
Preference number: 2 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQKISRV*WHVPIF
Trigger: GAAGATAGGCACGTGCCACCACACCCGGCTAATTTT...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp GCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGAATATTTACAGAAGAATTTATGTCCTTAGTTaGGTTGGGTTAAGCATTCCC +
Preference number: 2 (lower is better)
Translates to: ANCEGSDSRASGRNIYRRIYVLS*VGLSIP
Trigger: GGGAATGCTTAACCCAACCCAACTAAGGACATAAAT...TCTTCTGTAAATATTCCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR TCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 2 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAGATTCAGGCTCCTACTaGAGGGACAATCTAGGTAAT +
Preference number: 2 (lower is better)
Translates to: MRISFSAESLIALHSMCSDSGSY*RDNLGN
Trigger: ATTACCTAGATTGTCCCTTCAGTAGGAGCCTGAATC...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTCATAGGATGGGATTGTaGACTCTGCCAAAAATTAGT +
Preference number: 2 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIHRMGL*TLPKIS
Trigger: ACTAATTTTTGGCAGAGTTCACAATCCCATCCTATG...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACAAACACACATGCCCTaGAAAAGATCATTGTTCAAT +
Preference number: 2 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKQTHMP*KRSLFN
Trigger: ATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTG...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMNLSAI*ILLGGG
Trigger: CCCACCTCCAAGTAGTATGCAAATGGCACTGAGATT...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGAGATTGGCTGACAAATaGCATGTGGCTCTACAGCCA +
Preference number: 2 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQRLADK*HVALQP
Trigger: TGGCTGTAGAGCCACATGGCATTTGTCAGCCAATCT...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGTGCAGGTGCACATTCTaGATGAGGAGTGAGAGAATC +
Preference number: 2 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQCRCTF*MRSERI
Trigger: GATTCTCTCACTCCTCATGCAGAATGTGCACCTGCA...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCTTCAAGAAGTTTTCCTaGGAAATGTGGGCCATCAGA +
Preference number: 2 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCFKKFS*EMWAIR
Trigger: TCTGATGGCCCACATTTCCCAGGAAAACTTCTTGAA...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR CCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCGGTCATGGAAGGATATaGTCAGTTGAACTTGTGTTG +
Preference number: 2 (lower is better)
Translates to: PKPWADVISLRTEFIIFLGHGRI*SVELVL
Trigger: CAACACAAGTTCAACTGACCATATCCTTCCATGACC...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR TCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 2 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR TCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGGATTCAGGCTCCTACTaGAGGGACAATCTAGGTAAT +
Preference number: 2 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQDSGSY*RDNLGN
Trigger: ATTACCTAGATTGTCCCTTCAGTAGGAGCCTGAATC...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR TCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGCTGCTAATCAAAGCCTaGAAAATCGCCCCCAAATCA +
Preference number: 2 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQLLIKA*KIAPKS
Trigger: TGATTTGGGGGCGATTTTTCAGGCTTTGATTAGCAG...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTACATACAAACACACATaGCCTGCAAAAGATCATTGT +
Preference number: 2 (lower is better)
Translates to: FQMLEGQSQMQIPQALLITYKHT*PAKDHC
Trigger: ACAATGATCTTTTGCAGGGCATGTGTGTTTGTATGT...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTTTGGTGTGCTGTATTaGACCTGGTTAACTAACCCA +
Preference number: 2 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYFGVLY*TWLTNP
Trigger: TGGGTTAGTTAACCAGGTGCAATACAGCACACCAAA...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: RISVNVYGSASSLSILCRNLSAI*ILLGGG
Trigger: CCCACCTCCAAGTAGTATGCAAATGGCACTGAGATT...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGAAGAAGAAATGCATGTaGCTGGTGGGCTTGTTATCA +
Preference number: 2 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMKKKCM*LVGLLS
Trigger: TGATAACAAGCCCACCAGCCACATGCATTTCTTCTT...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp CCAAAACCGTGGGCAGATGTAATTAGTTTGAGAACGGAGTTTATAATTTTCCTCGATCAGGAATATACCTaGACTACTCTCTTTCAAAGG +
Preference number: 2 (lower is better)
Translates to: PKPWADVISLRTEFIIFLDQEYT*TTLFQR
Trigger: CCTTTGAAAGAGAGTAGTCCAGGTATATTCCTGATC...GAGGAAAATTATAAACTCCGTTCTCAAACTAATTACATCTGCCCACGGTTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR CAA 90 bp AATTTTGATCAGGAATATACCTGGACTACTCTCTTTCAAAGGCAATaGAACATCGTGATAAAGGATAGCATCTATTCAGGTCATGGAAGG +
Preference number: 2 (lower is better)
Translates to: NFDQEYTWTTLFQRQ*NIVIKDSIYSGHGR
Trigger: CCTTCCATGACCTGAATAGATGCTATCCTTTATCACGATGTTCAATTGCCTTTGAAAGAGAGTAGTCCAGGTATATTCCTGATCAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TTCCTCATTAGATTGTGGGTTTCAAGTTTCCATTTGCAATTTGAATGTTTCCAGAAGAAGAAATGCATGTaGCTGGTGGGCTTGTTATCA +
Preference number: 2 (lower is better)
Translates to: FLIRLWVSSFHLQFECFQKKKCM*LVGLLS
Trigger: TGATAACAAGCCCACCAGCCACATGCATTTCTTCTT...CTGGAAACATTCAAATTGCAAATGGAAACTTGAAACCCACAATCTAATGAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTTTTGTTTTTAACGTGTaGCAAGATAGACCCTCTTTT +
Preference number: 2 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIFVFNV*QDRPSF
Trigger: AAAAGAGGGTCTATCTTGCCACACGTTAAAAACAAA...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCATTTGTTTTTAACGTGTaGCAAGATAGACCCTCTTTT +
Preference number: 2 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAFVFNV*QDRPSF
Trigger: AAAAGAGGGTCTATCTTGCCACACGTTAAAAACAAA...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAAAGAAGCACCCCAGTTaGAGACATGTAAAATGGAAA +
Preference number: 2 (lower is better)
Translates to: MRISFSAESLIALHSMCSKKHPS*RHVKWK
Trigger: TTTCCATTTTACATGTCTCCAACTGGGGTGCTTCTT...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CCA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAGCAACAATTGGAGGATaGTTACTAACCAAAATCACC +
Preference number: 2 (lower is better)
Translates to: MRISFSAESLIALHSMCSATIGG*LLTKIT
Trigger: GGTGATTTTGGTTAGTAACCATCCTCCAATTGTTGC...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CAA 90 bp GACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCTATTaGCCAGGAAGTTGTAATATTGAAAAACTGTGCTCTTCTGAGAAT +
Preference number: 2 (lower is better)
Translates to: DKGNTNLKSEHFLCY*PGSCNIEKLCSSEN
Trigger: ATTCTCAGAAGAGCACAGTTTTTCAATATTACAACTTCCTGGCAAATAGCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR TCA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 2 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLIKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR GCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCCAAACACACATGCCCTaGAAAAGATCATTGTTCAAT +
Preference number: 2 (lower is better)
Translates to: YINTESNQQYKSRSIFTGQTHMP*KRSLFN
Trigger: ATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTG...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR TCA 72 bp GGTTGGCCGCCATCTGGTGGATGCGCTGTGGGATGCTaGCGATGGTCGACGGGGACAGGGCGCTGGCGTTGG +
Preference number: 3 (lower is better)
Translates to: GWPPSGGCAVGC*RWSTGTGRWRW
Trigger: CCAACGCCAGCGCCCTGTCCCCGTCGACCATCGTCAGCATCCCACAGCGCATCCACCAGATGGCGGCCAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR GCA 72 bp TGTTGGGAGTACTGGACCAGGTGCTCCATGCTGCTGTaGAGGGTGACCGGCCCCATGAGCAGATCCAGGTCG +
Preference number: 3 (lower is better)
Translates to: CWEYWTRCSMLL*RVTGPMSRSRS
Trigger: CGACCTGGATCTGCTCATGGGGCCGGTCACCCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTCCCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR CCA 72 bp CTGTTGGTGATGCTGACGTGGTTGGCCGCCATCTGGTaGATGCGCTGTGGGATGCTGACGATGGTCGACGGG +
Preference number: 3 (lower is better)
Translates to: LLVMLTWLAAIW*MRCGMLTMVDG
Trigger: CCCGTCGACCATCGTCAGCATCCCACAGCGCATCCACCAGATGGCGGCCAACCACGTCAGCATCACCAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR GCA 72 bp CTGTGGCCGTTGGAGCCTGGAGACCACGGCTTCGTCTaGGGCCGTGACTTGTGGAGGGGAATGTTTTCAGAA +
Preference number: 3 (lower is better)
Translates to: LWPLEPGDHGFV*GRDLWRGMFSE
Trigger: TTCTGAAAACATTCCCCTCCACAAGTCACGGCCGCAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR CCA 72 bp ATGCTGTTGGTGATGCTGACGTGGTTGGCCGCCATCTaGTGGATGCGCTGTGGGATGCTGACGATGGTCGAC +
Preference number: 3 (lower is better)
Translates to: MLLVMLTWLAAI*WMRCGMLTMVD
Trigger: GTCGACCATCGTCAGCATCCCACAGCGCATCCACCAGATGGCGGCCAACCACGTCAGCATCACCAACAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CAA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGCTGGCAGTCAAGCTTTaGGTGTGCTGTATTGCACCT +
Preference number: 3 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQLAVKL*VCCIAP
Trigger: AGGTGCAATACAGCACACCAAAAGCTTGACTGCCAG...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCAGTCCCTGTGGCCGTaGGAGCCTGGAGACCACGGC +
Preference number: 3 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPQSLWP*EPGDHG
Trigger: GCCGTGGTCTCCAGGCTCCAACGGCCACAGGGACTG...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR GCA 72 bp TGCGAGGCATATCATCGAAGACAAGTTTCTGCCTCTTaGAGTCCCTGTGGCCGTTGGAGCCTGGAGACCACG +
Preference number: 3 (lower is better)
Translates to: CEAYHRRQVSAS*SPCGRWSLETT
Trigger: CGTGGTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAGGCAGAAACTTGTCTTCGATGATATGCCTCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR GCA 72 bp TCGGCACTGCGAGGCATATCATCGAAGACAAGTTTCTaGCTCTTGCAGTCCCTGTGGCCGTTGGAGCCTGGA +
Preference number: 3 (lower is better)
Translates to: SALRGISSKTSF*LLQSLWPLEPG
Trigger: TCCAGGCTCCAACGGCCACAGGGACTGCAAGAGGCAGAAACTTGTCTTCGATGATATGCCTCGCAGTGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CAA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCAATTCTCGGTTTTCCTaGGCCAGGTTGTCGGCCATC +
Preference number: 3 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLNSRFS*ARLSAI
Trigger: GATGGCCGACAACCTGGCCAAGGAAAACCGAGAATT...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CAA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCAGATCCAGGTCGTaGAAGAATTCTCGGTTTTCC +
Preference number: 3 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQSRSRS*KNSRFS
Trigger: GGAAAACCGAGAATTCTTCAACGACCTGGATCTGCT...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR TCA 72 bp GTTGGAGCCTGGAGACCACGGCTTCGTCTGCGGCCGTaGCTTGTGGAGGGGAATGTTTTCAGAATTGTTGTG +
Preference number: 3 (lower is better)
Translates to: VGAWRPRLRLRP*LVEGNVFRIVV
Trigger: CACAACAATTCTGAAAACATTCCCCTCCACAAGTCACGGCCGCAGACGAAGCCGTGGTCTCCAGGCTCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR CCA 72 bp GGTGAAGCAAAGCCAAGTTCCTGTCCCACCCATCTCTaGGATGAGGAGTTCTCCATGGTGACCCTGAGTCAG +
Preference number: 3 (lower is better)
Translates to: GEAKPSSCPTHL*DEEFSMVTLSQ
Trigger: CTGACTCAGGGTCACCATGGAGAACTCCTCATCCCAGAGATGGGTGGGACAGGAACTTGGCTTTGCTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR CAA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTAATATTTCCAAATGCTaGAAGGCCAAAGCCAAATGC +
Preference number: 3 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGNISKC*KAKAKC
Trigger: GCATTTGGCTTTGGCCTTCAAGCATTTGGAAATATT...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAAACTGTGAGCAGTGGTaGTCTCAGGCAGAAGGGACA +
Preference number: 3 (lower is better)
Translates to: QSADKTLLAHLSNGASQGNCEQW*SQAEGT
Trigger: TGTCCCTTCTGCCTGAGACAACCACTGCTCACAGTT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp GGGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGCATGGGGAGTGGTCTTaGGGCTTTTCTCAAAGGAGT +
Preference number: 3 (lower is better)
Translates to: GNWHEEASYFHHSGSGLQHGEWS*GFSQRS
Trigger: ACTCCTTTGAGAAAAGCCCAAAGACCACTCCCCATG...CTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR CAA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACAATGCAGCCAGTTGTTaGTCTTCTGGTGTGGCATTG +
Preference number: 3 (lower is better)
Translates to: QTHRTQEEALVAAAPERNNAASC*SSGVAL
Trigger: CAATGCCACACCAGAAGACAAACAACTGGCTGCATT...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR TCA 72 bp CCAGGGCTACTGGTTGAACAGGAACCCTGTGGCCATTaGGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCA +
Preference number: 3 (lower is better)
Translates to: PGLLVEQEPCGH*DDLLKLPVEPS
Trigger: TGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCTGTTCAACCAGTAGCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR GCA 72 bp CCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTaGTCCACACGTGCTCCACAGATGAAACAAGACAGT +
Preference number: 3 (lower is better)
Translates to: PMPNPTETAVPT*STRAPQMKQDS
Trigger: ACTGTCTTGTTTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGACAGTGTCCAAAAACGTaGAGCCATCTGTGGAGACCA +
Preference number: 3 (lower is better)
Translates to: QSADKTLLAHLSNGASQGQCPKT*SHLWRP
Trigger: TGGTCTCCACAGATGGCTCAACGTTTTTGGACACTG...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCAAATCTCAGTGCCATTaGCATACTACTTGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLKSQCH*HTTWRW
Trigger: CCACCTCCAAGTAGTATGCAAATGGCACTGAGATTT...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCAAAGACGCCGCGTTTTaGCTAAATCTCAGTGCCATT +
Preference number: 3 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLKDAAF*LNLSAI
Trigger: AATGGCACTGAGATTTAGCAAAAACGCGGCGTCTTT...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCCAGTGTCCAAAAACGTaGAGCCATCTGTGGAGACCA +
Preference number: 3 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETQCPKT*SHLWRP
Trigger: TGGTCTCCACAGATGGCTCAACGTTTTTGGACACTG...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGGAAGAGCAGGGTATTaGGTAACATGCAATCTAGTA +
Preference number: 3 (lower is better)
Translates to: QTHRTQEEALVAAAPERNGRAGY*VTCNLV
Trigger: TACTAGATTGCATGTTACCAAATACCCTGCTCTTCC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCATGTGGCTGGTGGGCTaGTTATCACAGGTGCAGAAA +
Preference number: 3 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETMWLVG*LSQVQK
Trigger: TTTCTGCACCTGTGATAACAAGCCCACCAGCCACAT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAATGTGGCTGGTGGGCTaGTTATCACAGGTGCAGAAA +
Preference number: 3 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEMWLVG*LSQVQK
Trigger: TTTCTGCACCTGTGATAACAAGCCCACCAGCCACAT...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTGTCTGCGGCCGTGACTaGTGGAGGGGAATGTTTTCA +
Preference number: 3 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPVCGRD*WRGMFS
Trigger: TGAAAACATTCCCCTCCACAAGTCACGGCCGCAGAC...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR TCA 72 bp TTAAGCCAGTTGATACCACAGTGGCTGGCGCAACTCTaGAGTGTGCATGTTCAGAGTCCTGAGTCCCTAGAC +
Preference number: 3 (lower is better)
Translates to: LSQLIPQWLAQL*SVHVQSPESLD
Trigger: GTCTAGGGACTCAGGACTCTGAACATGCACACTTCAGAGTTGCGCCAGCCACTGTGGTATCAACTGGCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR GCA 72 bp AAAGACGCCGCGTTTTTGCTAAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGGGCTGGGAAGGGCTGT +
Preference number: 3 (lower is better)
Translates to: KDAAFLLNLSAI*ILLGGGAGKGC
Trigger: ACAGCCCTTCCCAGCCCCACCTCCAAGTAGTATGCAAATGGCACTGAGATTTAGCAAAAACGCGGCGTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 72 bp CTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTaGTTGATCCTACTTGACTCCAGGCCCTTCCTGCTG +
Preference number: 3 (lower is better)
Translates to: LHRGNLPFLHNV*LILLDSRPFLL
Trigger: CAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR CAA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCTGGCAGTCAAGCTTTaGGTGTGCTGTATTGCACCT +
Preference number: 3 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRLAVKL*VCCIAP
Trigger: AGGTGCAATACAGCACACCAAAAGCTTGACTGCCAG...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGATTCCATGGGGCCTaGTTCCATTGCATTTCCACA +
Preference number: 3 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNGFHGA*FHCIST
Trigger: TGTGGAAATGCAATGGAACAAGGCCCCATGGAATCC...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR TCA 72 bp CTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATaGAACAAGACAGTCATAAGAACTACACGCTCTGAC +
Preference number: 3 (lower is better)
Translates to: LLYQRAPHVLHR*NKTVIRTTRSD
Trigger: GTCAGAGCGTGTAGTTCTTATGACTGTCTTGTTTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR TCA 72 bp TTAGTGCTTTTGAATACTTTACAGCGTGGTCCCTTTTaGGTCGAAACATCCGCCAGTACAGGAGGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: LVLLNTLQRGPF*VETSASTGGPG
Trigger: GCCTGGCCCTCCTGTACTGGCGGATGTTTCGACTCAAAAGGGACCACGCTGTAAAGTATTCAAAAGCACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR CCA 72 bp TTTGCTTTCTGCCTCTATGAAAATGCTCTGAAGTGCTaGTCTTGGCCAGGCAAGCTACCTGTAGGCCATGTC +
Preference number: 3 (lower is better)
Translates to: FAFCLYENALKC*SWPGKLPVGHV
Trigger: GACATGGCCTACAGGTAGCTTGCCTGGCCAAGACCAGCACTTCAGAGCATTTTCATAGAGGCAGAAAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CCA 72 bp AAGGAGTACACCGCACTGGATATTTATGTCCTTAGTTaGGTTGGGTTAAGCATTCCCATCTGCGTGCCCTGG +
Preference number: 3 (lower is better)
Translates to: KEYTALDIYVLS*VGLSIPICVPW
Trigger: CCAGGGCACGCAGATGGGAATGCTTAACCCAACCCAACTAAGGACATAAATATCCAGTGCGGTGTACTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CCA 72 bp TTCCACTTTGCCAGGTGCTTGAATAGCAGAAAGTGGTaGAAGCCAGGTCATCTCCTGTCGAGGATGAATCCT +
Preference number: 3 (lower is better)
Translates to: FHFARCLNSRKW*KPGHLLSRMNP
Trigger: AGGATTCATCCTCGACAGGAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CCA 72 bp TGGTTCCACTTTGCCAGGTGCTTGAATAGCAGAAAGTaGTGGAAGCCAGGTCATCTCCTGTCGAGGATGAAT +
Preference number: 3 (lower is better)
Translates to: WFHFARCLNSRK*WKPGHLLSRMN
Trigger: ATTCATCCTCGACAGGAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTGGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR CAA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAAATCTCAGTGCCATTaGCATACTACTTGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETKSQCH*HTTWRW
Trigger: CCACCTCCAAGTAGTATGCAAATGGCACTGAGATTT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR TCA 72 bp GCCAACTTCCTAATTACAATGGAGAGGGAACTGGCATaGGGAAGCAAGTTATTTCCACCATTCCGGCAGTGG +
Preference number: 3 (lower is better)
Translates to: ANFLITMERELA*GSKLFPPFRQW
Trigger: CCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCCCTCTCCATTGTAATTAGGAAGTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CCA 72 bp AAAAGACTTGAAACAGATTGGCTGACAAATGCCATGTaGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGA +
Preference number: 3 (lower is better)
Translates to: KRLETDWLTNAM*LYSHRVTVAGR
Trigger: TCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACATGGCATTTGTCAGCCAATCTGTTTCAAGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCCAGTGTCCAAAAACGTaGAGCCATCTGTGGAGACCA +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIQCPKT*SHLWRP
Trigger: TGGTCTCCACAGATGGCTCAACGTTTTTGGACACTG...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGAAATCTCAGTGCCATTaGCATACTACTTGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRKSQCH*HTTWRW
Trigger: CCACCTCCAAGTAGTATGCAAATGGCACTGAGATTT...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TTTCAAACAAGCCAACTTCCTAATTACAATGGAGAGGGAACTGGCATGAGGAAGTGGGCTTTAAGCCAGTaGATACCACAGTGGCTGGCG +
Preference number: 3 (lower is better)
Translates to: FQTSQLPNYNGEGTGMRKWALSQ*IPQWLA
Trigger: CGCCAGCCACTGTGGTATCAACTGGCTTAAAGCCCA...CTTCCTCATGCCAGTTCCCTCTCCATTGTAATTAGGAAGTTGGCTTGTTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR-3UTR CAA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGCCAGTGCAGGCCCTGTaGGGAGTACTGGACCAGGTG +
Preference number: 3 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMPVQAL*GVLDQV
Trigger: CACCTGGTCCAGTACTCCCAACAGGGCCTGCACTGG...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCAGTGTCCAAAAACGTaGAGCCATCTGTGGAGACCA +
Preference number: 3 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSQCPKT*SHLWRP
Trigger: TGGTCTCCACAGATGGCTCAACGTTTTTGGACACTG...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGATGTGGCTGGTGGGCTaGTTATCACAGGTGCAGAAA +
Preference number: 3 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQMWLVG*LSQVQK
Trigger: TTTCTGCACCTGTGATAACAAGCCCACCAGCCACAT...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGACTCTTTCAAAGGCAATaGAACATCGTGATAAAGGAT +
Preference number: 3 (lower is better)
Translates to: QSADKTLLAHLSNGASQGLFQRQ*NIVIKD
Trigger: ATCCTTTATCACGATGTTCAATTGCCTTTGAAAGAG...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 72 bp AACTTTCAAAGACGCCGCGTTTTTGCTAAATCTCAGTaGCATTTGCATACTACTTGGAGGTGGGGCTGGGAA +
Preference number: 3 (lower is better)
Translates to: NFQRRRVFAKSQ*HLHTTWRWGWE
Trigger: TTCCCAGCCCCACCTCCAAGTAGTATGCAAATGGCACTGAGATTTAGCAAAAACGCGGCGTCTTTGAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 72 bp AGAAATGCATGTGGCTGGTGGGCTTGTTATCACAGGTaGAGAAAACTTCAACTCCTAACTGAGCTCCAACAC +
Preference number: 3 (lower is better)
Translates to: RNACGWWACYHR*RKLQLLTELQH
Trigger: GTGTTGGAGCTCAGTTAGGAGTTGAAGTTTTCTGCACCTGTGATAACAAGCCCACCAGCCACATGCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 72 bp AATGAAGTTAACAAACTTACCCTCCCACATAGGGGATaGTTCATGTCAAGCCACTGGTCTAATGCCTCCGTC +
Preference number: 3 (lower is better)
Translates to: NEVNKLTLPHRG*FMSSHWSNASV
Trigger: GACGGAGGCATTAGACCAGTGGCTTGACATGAAGCATCCCCTATGTGGGAGGGTAAGTTTGTTAACTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR GCA 72 bp CTGATTCAGCTTTTCAGGCTACATCAATACCCCTGGTaGTTCAACACAAATGCTGACCCTTGTACTGACTGG +
Preference number: 3 (lower is better)
Translates to: LIQLFRLHQYPW*FNTNADPCTDW
Trigger: CCAGTCAGTACAAGGGTCAGCATTTGTGTTGAAGCACCAGGGGTATTGATGTAGCCTGAAAAGCTGAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR CCA 72 bp CCACTGCCCACAACGGTAAGTTTCAAGAAGTTTTCCTaGGAAATGTGGGCCATCAGAGTGCTGATAAAACAC +
Preference number: 3 (lower is better)
Translates to: PLPTTVSFKKFS*EMWAIRVLIKH
Trigger: GTGTTTTATCAGCACTCTGATGGCCCACATTTCCCAGGAAAACTTCTTGAAACTTACCGTTGTGGGCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCCCTGCAAAAGATCATaGTTCAATGCTGAGGAAATG +
Preference number: 3 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPPCKRS*FNAEEM
Trigger: CATTTCCTCAGCATTGAACAATGATCTTTTGCAGGG...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACCCCTGCAAAAGATCATaGTTCAATGCTGAGGAAATG +
Preference number: 3 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNPCKRS*FNAEEM
Trigger: CATTTCCTCAGCATTGAACAATGATCTTTTGCAGGG...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATAAAGACGCCGCGTTTTaGCTAAATCTCAGTGCCATT +
Preference number: 3 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHKDAAF*LNLSAI
Trigger: AATGGCACTGAGATTTAGCAAAAACGCGGCGTCTTT...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATTCTAGTCTAAGTATTTaGTGCCGTCATCACCTTGAA +
Preference number: 3 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNSSLSI*CRHHLE
Trigger: TTCAAGGTGATGACGGCACAAAATACTTAGACTAGA...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAACTTTTCCACCATaGCATCTGCTTTATGCTTCA +
Preference number: 3 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYQTFPP*HLLYAS
Trigger: TGAAGCATAAAGCAGATGCAATGGTGGAAAAGTTTG...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR GCA 72 bp AATCAAAACGCATCAAAGGGCTGCAGGTGCACATTCTaGATGAGGAGTGAGAGAATCAGCATTATCATGGCA +
Preference number: 3 (lower is better)
Translates to: NQNASKGCRCTF*MRSERISIIMA
Trigger: TGCCATGATAATGCTGATTCTCTCACTCCTCATGCAGAATGTGCACCTGCAGCCCTTTGATGCGTTTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 72 bp CACCATGTTGGTTTCAGTTGTGTGCAGTTCCCTGACTaGACACAAGTCAGGGAACTAACTTGTGACACTAAA +
Preference number: 3 (lower is better)
Translates to: HHVGFSCVQFPD*TQVRELTCDTK
Trigger: TTTAGTGTCACAAGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAACATGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR CAA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAACAGTGTCCAAAAACGTaGAGCCATCTGTGGAGACCA +
Preference number: 3 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKQCPKT*SHLWRP
Trigger: TGGTCTCCACAGATGGCTCAACGTTTTTGGACACTG...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATTCTGTAAGAAAGCTATaGGTGGAAAGAAAAGACTTG +
Preference number: 3 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYSVRKL*VERKDL
Trigger: CAAGTCTTTTCTTTCCACCAATAGCTTTCTTACAGA...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGCCCTGCAAAAGATCATaGTTCAATGCTGAGGAAATG +
Preference number: 3 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLPCKRS*FNAEEM
Trigger: CATTTCCTCAGCATTGAACAATGATCTTTTGCAGGG...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACTCTGTAAGAAAGCTATaGGTGGAAAGAAAAGACTTG +
Preference number: 3 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNSVRKL*VERKDL
Trigger: CAAGTCTTTTCTTTCCACCAATAGCTTTCTTACAGA...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR TCA 72 bp CAGATGAAACAAGACAGTCATAAGAACTACACGCTCTaGCCACTGCCCACAACGGTAAGTTTCAAGAAGTTT +
Preference number: 3 (lower is better)
Translates to: QMKQDSHKNYTL*PLPTTVSFKKF
Trigger: AAACTTCTTGAAACTTACCGTTGTGGGCAGTGGTCAGAGCGTGTAGTTCTTATGACTGTCTTGTTTCATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATCTGGCAGTCAAGCTTTaGGTGTGCTGTATTGCACCT +
Preference number: 3 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYLAVKL*VCCIAP
Trigger: AGGTGCAATACAGCACACCAAAAGCTTGACTGCCAG...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTAATATTTCCAAATGCTaGAAGGCCAAAGCCAAATGC +
Preference number: 3 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIINISKC*KAKAKC
Trigger: GCATTTGGCTTTGGCCTTCAAGCATTTGGAAATATT...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTCTGGCAGTCAAGCTTTaGGTGTGCTGTATTGCACCT +
Preference number: 3 (lower is better)
Translates to: YLVTCNLVNFRHKNTWLILAVKL*VCCIAP
Trigger: AGGTGCAATACAGCACACCAAAAGCTTGACTGCCAG...AATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTTCTGTAAGAAAGCTATaGGTGGAAAGAAAAGACTTG +
Preference number: 3 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIISVRKL*VERKDL
Trigger: CAAGTCTTTTCTTTCCACCAATAGCTTTCTTACAGA...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGAAACCTCTGATCACTTaGTCTAGCCTGGGATTATGG +
Preference number: 3 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMKPLIT*SSLGLW
Trigger: CCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTT...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR GCA 72 bp TTCCATTGCATTTCCACACTCGATAAACGACAATGCTaGTTCAGCATAGTTCAAAGCCTTTCCAAACTTTTC +
Preference number: 3 (lower is better)
Translates to: FHCISTLDKRQC*FSIVQSLSKLF
Trigger: GAAAAGTTTGGAAAGGCTTTGAACTATGCTGAAGCAGCATTGTCGTTTATCGAGTGTGGAAATGCAATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR CCA 72 bp GAATGGGAAAATGAGGACATAAACTCTGGTTCCAAATaGTTGGAAGTGCAGTTTATGTGGTCAGGTTGTTTT +
Preference number: 3 (lower is better)
Translates to: EWENEDINSGSK*LEVQFMWSGCF
Trigger: AAAACAACCTGACCACATAAACTGCACTTCCAACCATTTGGAACCAGAGTTTATGTCCTCATTTTCCCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR CCA 72 bp TTGAATTTTCTAAGAAGTCACGGTTTAGCACTGGAATaGAATAGAAAGTGTGTGTCTGTGATTGTGTGTGAG +
Preference number: 3 (lower is better)
Translates to: LNFLRSHGLALE*NRKCVSVIVCE
Trigger: CTCACACACAATCACAGACACACACTTTCTATTCCATTCCAGTGCTAAACCGTGACTTCTTAGAAAATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTCCCTGCAAAAGATCATaGTTCAATGCTGAGGAAATG +
Preference number: 3 (lower is better)
Translates to: RISVNVYGSASSLSILCRPCKRS*FNAEEM
Trigger: CATTTCCTCAGCATTGAACAATGATCTTTTGCAGGG...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR-3UTR CAA 90 bp ATGAGGATAAGTTTTAGTGCAGAAAGTCTCATTGCATTGCATTCCATGTGTTCAAATATTTCCAAATGCTaGAAGGCCAAAGCCAAATGC +
Preference number: 3 (lower is better)
Translates to: MRISFSAESLIALHSMCSNISKC*KAKAKC
Trigger: GCATTTGGCTTTGGCCTTCAAGCATTTGGAAATATT...TGAACACATGGAATGCAATGCAATGAGACTTTCTGCACTAAAACTTATCCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CCA 72 bp CAAGTTAACCCCTTTGGTGACATATACAGAATAATCTaGACAAAGGGAACACAAATCTCAAGTCTGAACATT +
Preference number: 3 (lower is better)
Translates to: QVNPFGDIYRII*TKGTQISSLNI
Trigger: AATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTGTATATGTCACCAAAGGGGTTAACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR-3UTR CAA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATCATTCGTTTAGCTTCTaGCATAAAATAATCGGCACT +
Preference number: 3 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYHSFSF*HKIIGT
Trigger: AGTGCCGATTATTTTATGCAAGAAGCTAAACGAATG...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671937.1
3UTR GCA 72 bp AAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTaGTATTTGCCAGGAAGTTGTAATATTGAAAAACTG +
Preference number: 3 (lower is better)
Translates to: KGNTNLKSEHFL*YLPGSCNIEKL
Trigger: CAGTTTTTCAATATTACAACTTCCTGGCAAATAGCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTACAGGGCACTGCGGGTaGCGGGGCGGCTGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGTGHCG*RGGCAH
Trigger: GTGAGCGCAGCCGCCCCGCCACCCGCAGTGCCCTGT...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTACGGGGACAGGGCGCTaGCGTTGGAGAGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGTGTGR*RWRGCP
Trigger: AGGGCAGCCTCTCCAACGCCAGCGCCCTGTCCCCGT...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTTGGCAGGCTCCGGCTTaGTGGCAGGGACTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGWQAPA*WQGLPC
Trigger: ACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCA...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTAGGGTGAGGTCCCTATaGCAGGTGGGCGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGRVRSL*QVGAVP
Trigger: CGGAACAGCGCCCACCTGTCATAGGGACCTCACCCT...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGCGCTGCTGCTGTGCTTaGCCGCCATGGCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQRCCCA*PPWQVA
Trigger: GGCCACCTGCCATGGCGGCCAAGCACAGCAGCAGCG...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTTGCTGCTGCTGCCCTTaGTGGAAGGCACCGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGCCCCP*WKAPRF
Trigger: GAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCA...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTCTCTTGCAGTCCCTGTaGCCGTTGGAGCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGLLQSL*PLEPGD
Trigger: GTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAG...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGGACCAGAGCCCACTCTaGCCCCAGGGTGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQDQSPL*PQGEVP
Trigger: AGGGACCTCACCCTGGGGCCAGAGTGGGCTCTGGTC...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCGCTTGGCCTTGGCTCTaGCAGGCTCCGGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GEASGHLQSWRKVKGKQGAWPWL*QAPACW
Trigger: CCAGCAAGCCGGAGCCTGCCAGAGCCAAGGCCAAGC...GCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACACAGGGCACTGCGGGTaGCGGGGCGGCTGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNTGHCG*RGGCAH
Trigger: GTGAGCGCAGCCGCCCCGCCACCCGCAGTGCCCTGT...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGACCACTGCCCCCGTTaGCAGCGGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLDHCPR*QRPPSA
Trigger: GGCTGAAGGAGGCCGCTGCCAACGGGGGCAGTGGTC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGAGACCCCACGGAGCTaGCGGGAGAGGGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAETPRS*RERGWE
Trigger: CTCCCAACCCCTCTCCCGCCAGCTCCGTGGGGTCTC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGAGACCCCACGGAGCTaGCGGGAGAGGGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLETPRS*RERGWE
Trigger: CTCCCAACCCCTCTCCCGCCAGCTCCGTGGGGTCTC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGGACTCATCAGGGGCCTaGTCTTGGCCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQDSSGA*SWPSIG
Trigger: GCCAATGGACGGCCAAGATCAGGCCCCTGATGAGTC...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCTGGCAGGCTCCGGCTTaGTGGCAGGGACTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAWQAPA*WQGLPC
Trigger: ACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCA...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCTGCTTAGCCCCCGCGTaGGGCGCTTCTCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLACLAPA*GASRRS
Trigger: TGACCTGCGAGAAGCGCCGCACGCGGGGGCTAAGCA...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCCGAGGTTCTGCAGTTaGGCTGCTGGACCACGGCGC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAPRFCS*AAGPRR
Trigger: GCGCCGTGGTCCAGCAGCCCAACTGCAGAACCTCGG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCACAGGGCACTGCGGGTaGCGGGGCGGCTGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETTGHCG*RGGCAH
Trigger: GTGAGCGCAGCCGCCCCGCCACCCGCAGTGCCCTGT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGGTGTGTCCGAGGTGTaGCTGGGCGGTGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLGVSEV*LGGALS
Trigger: TGAGAGCGCACCGCCCAGCCACACCTCGGACACACC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGGTGTGTCCGAGGTGTaGCTGGGCGGTGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNGVSEV*LGGALS
Trigger: TGAGAGCGCACCGCCCAGCCACACCTCGGACACACC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGGTGTGTCCGAGGTGTaGCTGGGCGGTGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAGVSEV*LGGALS
Trigger: TGAGAGCGCACCGCCCAGCCACACCTCGGACACACC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTCACGGAGATGGGGCTTaGGCGGCTTTAGATGAGTTC +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGHGDGA*AALDEF
Trigger: GAACTCATCTAAAGCCGCCCAAGCCCCATCTCCGTG...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGTGGTTGGCCGCCATCTaGTGGATGCGCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQWLAAI*WMRCGM
Trigger: CATCCCACAGCGCATCCACCAGATGGCGGCCAACCA...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCAGGGTGAGGTCCCTATaGCAGGTGGGCGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLARVRSL*QVGAVP
Trigger: CGGAACAGCGCCCACCTGTCATAGGGACCTCACCCT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACACTCTGGCCCCAGGGTaGGGTCCCTATGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNTLAPG*GPYDRW
Trigger: CCACCTGTCATAGGGACCTCACCCTGGGGCCAGAGT...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCACTCTGGCCCCAGGGTaGGGTCCCTATGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLATLAPG*GPYDRW
Trigger: CCACCTGTCATAGGGACCTCACCCTGGGGCCAGAGT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTAGAGCCCTGTTGTGTTaGTCTCTGTTGGCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGRALLC*SLLAVR
Trigger: TCTGACGGCCAACAGAGAGCAACACAACAGGGCTCT...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGGGCCCACCTCCACATTaGACACTTGTTTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQGPPPH*TLVWPE
Trigger: CTCGGGCCAAACAAGTGTGCAATGTGGAGGTGGGCC...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCACAGTGTCCGCTGCTaGTGTGCTTGGCCGCCATGG +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAHSVRC*CAWPPW
Trigger: CCATGGCGGCCAAGCACAGCAGCAGCGGACACTGTG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCGCCTGGTGGGCTTCTTaGCCGCGGACCTCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETAWWAS*PRTSGQ
Trigger: CTGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGC...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGCCTGGTGGGCTTCTTaGCCGCGGACCTCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHAWWAS*PRTSGQ
Trigger: CTGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGGTGTGGCTGGGCGGTaGGCTCTCAGAGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLGVAGR*ALRVLG
Trigger: ACCAAGGACTCTGAGAGCGCACCGCCCAGCCACACC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGACCACGGCTTCGTCTaGGGCCGTGACTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNDHGFV*GRDLWR
Trigger: CCTCCACAAGTCACGGCCGCAGACGAAGCCGTGGTC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCTGCCCTCACTCTCGCTaGAGCTGCTCTCGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLCPHSR*SCSRSP
Trigger: CGGAGACCGAGAGCAGCTCCAGCGAGAGTGAGGGCA...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTCCTCTCGGTGCGCCTaGTGGGCTTCTTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNSSRCA*WASCPR
Trigger: CCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGA...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGCGCTCTCAGAGTCCTTaGTGGCAGGGGCGCTCAATA +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQRSQSP*WQGRSI
Trigger: TATTGAGCGCCCCTGCCACCAAGGACTCTGAGAGCG...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCTGTCCGAGGTGTGGCTaGGCGGTGCGCTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLCPRCG*AVRSQS
Trigger: ACTCTGAGAGCGCACCGCCCAGCCACACCTCGGACA...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCGAGACCCCACGGAGCTaGCGGGAGAGGGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGETPRS*RERGWE
Trigger: CTCCCAACCCCTCTCCCGCCAGCTCCGTGGGGTCTC...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGGTGGCTCATGCACTTTaGGAGGCCGAGGCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQVAHAL*EAEAKG
Trigger: TCCTTTGGCCTCGGCCTCCCAAAGTGCATGAGCCAC...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGTGTCCTGTACACCCTaGCCCTGGGAGCGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GNWHEEASYFHHSGSGLQVSCTP*PWERRL
Trigger: GAGCCTGCGCTCCCAGGGCCAGGGTGTACAGGACAC...CTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGACTCATCAGGGGCCTaGTCTTGGCCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLDSSGA*SWPSIG
Trigger: GCCAATGGACGGCCAAGATCAGGCCCCTGATGAGTC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGACTCATCAGGGGCCTaGTCTTGGCCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNDSSGA*SWPSIG
Trigger: GCCAATGGACGGCCAAGATCAGGCCCCTGATGAGTC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGACTCATCAGGGGCCTaGTCTTGGCCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLADSSGA*SWPSIG
Trigger: GCCAATGGACGGCCAAGATCAGGCCCCTGATGAGTC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGTGAGGTCTCCGCCGTaGGGCTGCAGCTGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHVRSPP*GCSWLS
Trigger: CGACAGCCAGCTGCAGCCTCACGGCGGAGACCTCAC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGTGAGGTCTCCGCCGTaGGGCTGCAGCTGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQVRSPP*GCSWLS
Trigger: CGACAGCCAGCTGCAGCCTCACGGCGGAGACCTCAC...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTTGGAGAGGCTGCCCTaGGACCCCACGGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLERLP*DPTELA
Trigger: CGCCAGCTCCGTGGGGTCTCAGGGCAGCCTCTCCAA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GGGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGCACAGTGTCCGCTGCTaGTGTGCTTGGCCGCCATGG +
Preference number: 4 (lower is better)
Translates to: GNWHEEASYFHHSGSGLQHSVRC*CAWPPW
Trigger: CCATGGCGGCCAAGCACAGCAGCAGCGGACACTGTG...CTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGAACACAGTGTCCGCTaGTGCTGTGCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLEHSVR*CCAWPP
Trigger: TGGCGGCCAAGCACAGCAGCAGCGGACACTGTGTTC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTTCTCCACAACGTTTGCTTGATCCTACTTGACTCCAGGCCCTTCCTGCTGGGCTGGCAGGCTCCGGCTTaGTGGCAGGGACTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: FLHNVCLILLDSRPFLLGWQAPA*WQGLPC
Trigger: ACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCA...GCCCAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGCGGGCGGGGACTTCTaGTTCACGCCTTTACTCCCA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAAGGDF*FTPLLP
Trigger: TGGGAGTAAAGGCGTGAAGCAGAAGTCCCCGCCCGC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGGGAAGAGGCTCTGGTTaGTGCTGCCCCAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQGRGSG*CCPRKE
Trigger: TTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCC...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACCCAGGAGGCAGAGGATaGAGTGAGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNPGGRG*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCATCCTCTGCCTCCTGG...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CCCTTCCTGCTGGGCTTTAAGCCAGTTGATACCACAGTGGCTGGCGCAACTCTGGTCCCACAGAGCAGATaGGCCACAGGCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PFLLGFKPVDTTVAGATLVPQSR*ATGCVL
Trigger: CAGGACACAGCCTGTGGCGCATCTGCTCTGTGGGAC...CAGAGTTGCGCCAGCCACTGTGGTATCAACTGGCTTAAAGCCCAGCAGGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTTGTTCTGGATCCGGTTaGAGAGTTCATCCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGCSGSG*RVHPPC
Trigger: ACAAGGGGGATGAACTCTCCAACCGGATCCAGAACA...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCGGCCGCCATGGCAGGTaGCCTCTCCTGGGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGGRHGR*PLLGLK
Trigger: CTTCAGACCCAGGAGAGGCCACCTGCCATGGCGGCC...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTCTCCACAACGTTTGCTTGATCCTACTTGACTCCAGGCCCTTCCTGCTGGGCTGTGCTTGGCCGCCATaGCAGGTGGCCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: FLHNVCLILLDSRPFLLGCAWPP*QVASPG
Trigger: CCCAGGAGAGGCCACCTGCCATGGCGGCCAAGCACA...GCCCAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACCCGAGGTTCTGCAGTTaGGCTGCTGGACCACGGCGC +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNPRFCS*AAGPRR
Trigger: GCGCCGTGGTCCAGCAGCCCAACTGCAGAACCTCGG...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCTGCTGCTGCCCTTGCTaGAAGGCACCGAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLCCCPC*KAPRFC
Trigger: GCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCA...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCCTCTCGGTGCGCCTaGTGGGCTTCTTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHSSRCA*WASCPR
Trigger: CCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTTGCGGCCGTGACTTGTaGAGGGGAATGTTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGCGRDL*RGMFSE
Trigger: TTCTGAAAACATTCCCCTCCACAAGTCACGGCCGCA...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCTCTTGCAGTCCCTGTaGCCGTTGGAGCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLALLQSL*PLEPGD
Trigger: GTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACACAGGGCGCTGGCGTTaGAGAGGCTGCCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNTGRWR*RGCPET
Trigger: GGTCTCAGGGCAGCCTCTCCAACGCCAGCGCCCTGT...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAACAGGGCGCTGGCGTTaGAGAGGCTGCCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGTGRWR*RGCPET
Trigger: GGTCTCAGGGCAGCCTCTCCAACGCCAGCGCCCTGT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACACGGGGACAGGGCGCTaGCGTTGGAGAGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHTGTGR*RWRGCP
Trigger: AGGGCAGCCTCTCCAACGCCAGCGCCCTGTCCCCGT...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCCACCATTCCGGCAGTaGGCTCCAGGCTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: PGRVPLGDHSSSCTEETFPPFRQ*APGSQM
Trigger: CATCTGGGAGCCTGGAGCCCACTGCCGGAATGGTGG...GAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp CGTAGCAGAGAACACAGGGTTTCAATGGTCAGTGGAGCTGAGACAGAGGAGGGCGACTCATCAGGGGCCTaGTCTTGGCCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: RSREHRVSMVSGAETEEGDSSGA*SWPSIG
Trigger: GCCAATGGACGGCCAAGATCAGGCCCCTGATGAGTC...GCCCTCCTCTGTCTCAGCTCCACTGACCATTGAAACCCTGTGTTCTCTGCTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR TCA 90 bp CCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCGACTCATCAGGGGCCTaGTCTTGGCCGTCCATTGGC +
Preference number: 4 (lower is better)
Translates to: PGRVPLGDHSSSCTEETFDSSGA*SWPSIG
Trigger: GCCAATGGACGGCCAAGATCAGGCCCCTGATGAGTC...GAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp CCCTTCCTGCTGGGCTTTAAGCCAGTTGATACCACAGTGGCTGGCGCAACTCTGAGGGACTCCCCTGTATaGTGTGCAGTGCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: PFLLGFKPVDTTVAGATLRDSPV*CAVHAG
Trigger: ACCAGCGTGCACTGCACATCATACAGGGGAGTCCCT...CAGAGTTGCGCCAGCCACTGTGGTATCAACTGGCTTAAAGCCCAGCAGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCCTGCTTGGGGATGCTaGACTTGGAGAGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAPAWGC*TWRAWP
Trigger: AGGCCAAGCTCTCCAAGTTCAGCATCCCCAAGCAGG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp TGGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCCTGCTTGGGGATGCTaGACTTGGAGAGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: WGGLRTLTIMAEGEGEARPAWGC*TWRAWP
Trigger: AGGCCAAGCTCTCCAAGTTCAGCATCCCCAAGCAGG...CCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR TCA 90 bp GGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCACCGGAGAGCCGTTCTCTaGGCTGCCTGCTGTTCATTC +
Preference number: 4 (lower is better)
Translates to: GGLRTLTIMAEGEGEARHRRAVL*AACCSF
Trigger: GAATGAACAGCAGGCAGCTCAGAGAACGGCTCTCCG...GTGCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGGGCGCCGTCCCCGGCTaGGGTCCTCTCGGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLGAVPG*GPLGAP
Trigger: AGGCGCACCGAGAGGACCTCAGCCGGGGACGGCGCC...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGCTCCCTGGGACTTCTTaGTCTCCCTGTAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQLPGTS*SPCSRL
Trigger: AAGACGACTACAGGGAGATCAAGAAGTCCCAGGGAG...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGTGAGGTCTCCGCCGTaGGGCTGCAGCTGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNVRSPP*GCSWLS
Trigger: CGACAGCCAGCTGCAGCCTCACGGCGGAGACCTCAC...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCTTCGTCTGCGGCCGTaGCTTGTGGAGGGGAATGTT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLALRLRP*LVEGNV
Trigger: AACATTCCCCTCCACAAGTCACGGCCGCAGACGAAG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTCAAAACCCAAGTCCCTaGTTCAGCTTTTCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGQNPSP*FSFSGY
Trigger: GTAGCCTGAAAAGCTGAATCAGGGACTTGGGTTTTG...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGTGCCTCTCTTACTCTaGTGCACGGGGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAVPLLL*CTGTAA
Trigger: AGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGGCAC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAACCGTCAGAGGGTGGGTaGCCAGCCTTCTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKPSEGG*PAFCQP
Trigger: GGGCTGGCAGAAGGCTGGGCACCCACCCTCTGACGG...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTGTCCGCTGCTGCTGTaGTTGGCCGCCATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNCPLLL*LAAMAG
Trigger: ACCTGCCATGGCGGCCAAGCACAGCAGCAGCGGACA...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGGAACACAGTGTCCGCTaGTGCTGTGCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GTGMRKQVISTIPAVGSREHSVR*CCAWPP
Trigger: TGGCGGCCAAGCACAGCAGCAGCGGACACTGTGTTC...CCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCAGTCAGATCCGGAGCTaGTCTCTGAGTCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLASQIRS*SLSRWR
Trigger: CCTCCAGCGACTCAGAGAGCAGCTCCGGATCTGACT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCCACTTGTTAGAGGATaGCGGTTCAGCCTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAPLVRG*RFSLGA
Trigger: AGCCCCGAGGCTGAACCGGCATCCTCTAACAAGTGG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGGCAGCCACGGTCTGTaGTTTGGACAGAGGGTACTC +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLGSHGL*FGQRVL
Trigger: GAGTACCCTCTGTCCAAAGCACAGACCGTGGCTGCC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGATGCTCCATGCTGCTGTaGAGGGTGACCGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGCSMLL*RVTGPM
Trigger: CATGGGGCCGGTCACCCTGCACAGCAGCATGGAGCA...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGGCCGCCATGGCAGGTaGCCTCTCCTGGGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTGRHGR*PLLGLK
Trigger: CTTCAGACCCAGGAGAGGCCACCTGCCATGGCGGCC...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCTGTGCTTGGCCGCCATaGCAGGTGGCCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETCAWPP*QVASPG
Trigger: CCCAGGAGAGGCCACCTGCCATGGCGGCCAAGCACA...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCATCTTGGCCGTCCATTaGCCTCACATACGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAILAVH*PHIRGR
Trigger: CCGACCGCGTATGTGAGGCCAATGGACGGCCAAGAT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACGCTTGGCCTTGGCTCTaGCAGGCTCCGGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHAWPWL*QAPACW
Trigger: CCAGCAAGCCGGAGCCTGCCAGAGCCAAGGCCAAGC...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACCTGCAGTTGGGCTGCTaGACCACGGCGCTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNLQLGC*TTALSE
Trigger: CTCTGACAGCGCCGTGGTCCAGCAGCCCAACTGCAG...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAATCTCGGTGCGCCTGGTaGGCTTCTTGCCCGCGGACC +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKSRCAW*ASCPRT
Trigger: GGTCCGCGGGCAAGAAGCCCACCAGGCGCACCGAGA...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGACCACTGCCCCCGTTaGCAGCGGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNDHCPR*QRPPSA
Trigger: GGCTGAAGGAGGCCGCTGCCAACGGGGGCAGTGGTC...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCTCTCAGAGTCCTTGGTaGCAGGGGCGCTCAATACCC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLASQSPW*QGRSIP
Trigger: GGGTATTGAGCGCCCCTGCCACCAAGGACTCTGAGA...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACTCTCAGAGTCCTTGGTaGCAGGGGCGCTCAATACCC +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNSQSPW*QGRSIP
Trigger: GGGTATTGAGCGCCCCTGCCACCAAGGACTCTGAGA...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCGCTCTCAGAGTCCTTaGTGGCAGGGGCGCTCAATA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLARSQSP*WQGRSI
Trigger: TATTGAGCGCCCCTGCCACCAAGGACTCTGAGAGCG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGGTGTGTCCGAGGTGTaGCTGGGCGGTGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTGVSEV*LGGALS
Trigger: TGAGAGCGCACCGCCCAGCCACACCTCGGACACACC...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAGGTGTGTCCGAGGTGTaGCTGGGCGGTGCGCTCTCA +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEGVSEV*LGGALS
Trigger: TGAGAGCGCACCGCCCAGCCACACCTCGGACACACC...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGGAGACCCCACGGAGCTaGCGGGAGAGGGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRETPRS*RERGWE
Trigger: CTCCCAACCCCTCTCCCGCCAGCTCCGTGGGGTCTC...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGACGGGGACAGGGCGCTaGCGTTGGAGAGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRTGTGR*RWRGCP
Trigger: AGGGCAGCCTCTCCAACGCCAGCGCCCTGTCCCCGT...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGCTGCACCCCTCTGCCTaGTTAATGAGGACTCAACTG +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQLHPSA*LMRTQL
Trigger: CAGTTGAGTCCTCATTAACCAGGCAGAGGGGTGCAG...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCAGCGTGGTCCCTTTTaGGTCGAAACATCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAQRGPF*VETSAS
Trigger: ACTGGCGGATGTTTCGACTCAAAAGGGACCACGCTG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAACTCTGGCCCCAGGGTaGGGTCCCTATGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQTLAPG*GPYDRW
Trigger: CCACCTGTCATAGGGACCTCACCCTGGGGCCAGAGT...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCACTCTGGCCCCAGGGTaGGGTCCCTATGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETTLAPG*GPYDRW
Trigger: CCACCTGTCATAGGGACCTCACCCTGGGGCCAGAGT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGTGTCCAAAAACGTTaGGCCATCTGTGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQSVQKR*AICGDQ
Trigger: CTGGTCTCCACAGATGGCTCAACGTTTTTGGACACT...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CCCTTCCTGCTGGGCTTTAAGCCAGTTGATACCACAGTGGCTGGCGCAACTCTGCTCCAGGCTCCCAGATaGAGAGCTGATTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PFLLGFKPVDTTVAGATLLQAPR*RADSFP
Trigger: TGGGAAGGAATCAGCTCTTCATCTGGGAGCCTGGAG...CAGAGTTGCGCCAGCCACTGTGGTATCAACTGGCTTAAAGCCCAGCAGGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp CCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCCTCTCTTACTCTGCTaGACGGGGACAGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PGRVPLGDHSSSCTEETFPLLLC*TGTAAG
Trigger: ACCAGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGG...GAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp TGGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGTACGCGGTCGGTTTCTaGTGGACCAGGCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: WGGLRTLTIMAEGEGEARYAVGF*WTRLGF
Trigger: AAAACCCAGCCTGGTCCAGCAGAAACCGACCGCGTA...CCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCGCCTGGTGGGCTTCTTaGCCGCGGACCTCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIAWWAS*PRTSGQ
Trigger: CTGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGC...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACATTTGGGGACGATCCTaGTTAGCCCCCGCGTGCGGC +
Preference number: 4 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHIWGRS*LAPACG
Trigger: GCCGCACGCGGGGGCTAAGCAGGATCGTCCCCAAAT...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATTGGCGTTGGAGAGGCTaGCCTGAGACCCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYWRWRG*PETPRS
Trigger: GCTCCGTGGGGTCTCAGGGCAGCCTCTCCAACGCCA...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGNLSAI*ILLGGG
Trigger: CCCACCTCCAAGTAGTATGCAAATGGCACTGAGATT...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTCATCAATACCCCTGGTaGTTCAACACAAATGCTGAC +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGHQYPW*FNTNAD
Trigger: GTCAGCATTTGTGTTGAAGCACCAGGGGTATTGATG...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTTGGCCGTCAGAGGGTaGGTGCCCAGCCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLAVRG*VPSLLP
Trigger: TGGCAGAAGGCTGGGCACCCACCCTCTGACGGCCAA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCTTGGCCGTCAGAGGGTaGGTGCCCAGCCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETLAVRG*VPSLLP
Trigger: TGGCAGAAGGCTGGGCACCCACCCTCTGACGGCCAA...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGCGGTCGGTTTCTGCTaGACCAGGCTGGGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAAVGFC*TRLGFE
Trigger: TTCAAAACCCAGCCTGGTCCAGCAGAAACCGACCGC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGCGGTCGGTTTCTGCTaGACCAGGCTGGGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNAVGFC*TRLGFE
Trigger: TTCAAAACCCAGCCTGGTCCAGCAGAAACCGACCGC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGATCTTGGCCGTCCATTaGCCTCACATACGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: GTGMRKQVISTIPAVGSRILAVH*PHIRGR
Trigger: CCGACCGCGTATGTGAGGCCAATGGACGGCCAAGAT...CCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCCAGGCTCCGGCTTGCTaGCAGGGACTCCCCTGTATG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETQAPAC*QGLPCM
Trigger: CATACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTG...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTCATGGGGAGTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATAGCTTGGCCTTGGCTCTaGCAGGCTCCGGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SHGEWSLGFSQRSTPHWIAWPWL*QAPACW
Trigger: CCAGCAAGCCGGAGCCTGCCAGAGCCAAGGCCAAGC...TATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCACTCCCCATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCGAGGTTCTGCAGTTaGGCTGCTGGACCACGGCGC +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRPRFCS*AAGPRR
Trigger: GCGCCGTGGTCCAGCAGCCCAACTGCAGAACCTCGG...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTTGCTCTCTGAGTCGCTaGAGGAGCTGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTCSLSR*RSCCCR
Trigger: GCGGCAGCAGCAGCTCCTCCAGCGACTCAGAGAGCA...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGCCCTCACTCTCGCTaGAGCTGCTCTCGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHCPHSR*SCSRSP
Trigger: CGGAGACCGAGAGCAGCTCCAGCGAGAGTGAGGGCA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCACAGGGCACTGCGGGTaGCGGGGCGGCTGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSTGHCG*RGGCAH
Trigger: GTGAGCGCAGCCGCCCCGCCACCCGCAGTGCCCTGT...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGACGCAGCTCCTTGCGGTaGCTCGCTCTGTTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGRSSLR*LALLLP
Trigger: TGGCAACAACAGAGCGAGCCACCGCAAGGAGCTGCG...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCGTGGCCGTTGGAGCCTaGAGACCACGGCTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETVAVGA*RPRLRL
Trigger: CAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCAC...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGTGGCCGTTGGAGCCTaGAGACCACGGCTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHVAVGA*RPRLRL
Trigger: CAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCAC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCACGGAGATGGGGCTTaGGCGGCTTTAGATGAGTTC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAHGDGA*AALDEF
Trigger: GAACTCATCTAAAGCCGCCCAAGCCCCATCTCCGTG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACGGAGATGGGGCTTaGGCGGCTTTAGATGAGTTC +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLHGDGA*AALDEF
Trigger: GAACTCATCTAAAGCCGCCCAAGCCCCATCTCCGTG...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTGGCCGCCATCTGGTaGATGCGCTGTGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNLAAIW*MRCGML
Trigger: CAGCATCCCACAGCGCATCCACCAGATGGCGGCCAA...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACCAGTGCAGGCCCTGTTaGGAGTACTGGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNQCRPC*EYWTRC
Trigger: GCACCTGGTCCAGTACTCCCAACAGGGCCTGCACTG...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAGACCAGAGCCCACTCTaGCCCCAGGGTGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKDQSPL*PQGEVP
Trigger: AGGGACCTCACCCTGGGGCCAGAGTGGGCTCTGGTC...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCTGTTGAGCCTTCACTaGGACACTGGGAGCGTGCAT +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLLLSLH*DTGSVH
Trigger: ATGCACGCTCCCAGTGTCCCAGTGAAGGCTCAACAG...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CTCACAGTTCCACATGGCTGGGGAGGCCTCAGGACACTTACAATCATGGCGGAAACTCACAGTTCCACATaGCTGGGGAGGCCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: LTVPHGWGGLRTLTIMAETHSST*LGRPQD
Trigger: GTCCTGAGGCCTCCCCAGCCATGTGGAACTGTGAGT...TTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCCAGCCATGTGGAACTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
3UTR CAA 72 bp CTGCGAGGCATATCATCGAAGACAAGTTTCTGCCTCTaGCAGTCCCTGTGGCCGTTGGAGCCTGGAGACCAC +
Preference number: 4 (lower is better)
Translates to: LRGISSKTSFCL*QSLWPLEPGDH
Trigger: GTGGTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAGGCAGAAACTTGTCTTCGATGATATGCCTCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
CDS-3UTR TCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTGGTGGTCCTGGCGTTaGTGGAGCCTACAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPWWSWR*WSLQGP
Trigger: GGGCCCCTGTAGGCTCCATCAACGCCAGGACCACCA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR TCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATTTGGAGAGGCTGCCCTaGGACCCCACGGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHLERLP*DPTELA
Trigger: CGCCAGCTCCGTGGGGTCTCAGGGCAGCCTCTCCAA...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp AATGCAGCCAGTTGTTTGTCTTCTGGTGTGGCATTGGGGCCTGAGTGGGTTTTTAGGGTGAGGTCCCTATaGCAGGTGGGCGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: NAASCLSSGVALGPEWVFRVRSL*QVGAVP
Trigger: CGGAACAGCGCCCACCTGTCATAGGGACCTCACCCT...AAAAACCCACTCAGGCCCCAATGCCACACCAGAAGACAAACAACTGGCTGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671937.1
CDS-3UTR TCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACGGCGGGACAATCACTTaGACCCAGGAGGCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNGGTIT*TQEAED
Trigger: ATCCTCTGCCTCCTGGGTTCAAGTGATTGTCCCGCC...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCAAGAACTACACGCTCTaGCCACTGCCCACAACGGTA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAKNYTL*PLPTTV
Trigger: TACCGTTGTGGGCAGTGGTCAGAGCGTGTAGTTCTT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CTCACAGTTCCACATGGCTGGGGAGGCCTCAGGACACTTACAATCATGGCGGAAAATCATGGCGGAAGGTaGAGGGGAAGCAAGGCACGT +
Preference number: 4 (lower is better)
Translates to: LTVPHGWGGLRTLTIMAENHGGR*RGSKAR
Trigger: ACGTGCCTTGCTTCCCCTTCACCTTCCGCCATGATT...TTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCCAGCCATGTGGAACTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR GCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCTGTCGACTTCAAACTTaGCGCCCGTCTCCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGCRLQT*RPSPVW
Trigger: CCAGACCGGAGACGGGCGGCAAGTTTGAAGTCGACA...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317233.8
ENST00000672756.2
CDS-3UTR GCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGACCTCTCTTACTCTGCTaGACGGGGACAGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGPLLLC*TGTAAG
Trigger: ACCAGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGG...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCAGAGCCCTGTTGTGTTaGTCTCTGTTGGCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLARALLC*SLLAVR
Trigger: TCTGACGGCCAACAGAGAGCAACACAACAGGGCTCT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp CCCTTCCTGCTGGGCTTTAAGCCAGTTGATACCACAGTGGCTGGCGCAACTCTGAGAGCCCTGTTGTGTTaGTCTCTGTTGGCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: PFLLGFKPVDTTVAGATLRALLC*SLLAVR
Trigger: TCTGACGGCCAACAGAGAGCAACACAACAGGGCTCT...CAGAGTTGCGCCAGCCACTGTGGTATCAACTGGCTTAAAGCCCAGCAGGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp AGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCTGTCCGCTGCTGCTGTaGTTGGCCGCCATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SATRRPQFFLHRGNLPFLCPLLL*LAAMAG
Trigger: ACCTGCCATGGCGGCCAAGCACAGCAGCAGCGGACA...GAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAGAACACAGTGTCCGCTaGTGCTGTGCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEEHSVR*CCAWPP
Trigger: TGGCGGCCAAGCACAGCAGCAGCGGACACTGTGTTC...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGCTGCTGCTGCTGCTaGTGCCCTTGCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHCCCCC*CPCWKA
Trigger: TGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAAGAGGGTACTCCTCCTaGTCGGACTCCAGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQRGYSS*SDSRSE
Trigger: CTCCGACCTGGAGTCCGAGCAGGAGGAGTACCCTCT...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACAGAGGGTACTCCTCCTaGTCGGACTCCAGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHRGYSS*SDSRSE
Trigger: CTCCGACCTGGAGTCCGAGCAGGAGGAGTACCCTCT...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAGAGTACTGGACCAGGTaGTCCATGCTGCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGEYWTR*SMLLCR
Trigger: CCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTC...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAACTGTTCCGCAGCCAGTaGAGGCCCTGTTGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDELFRSQ*RPCWEY
Trigger: GTACTCCCAACAGGGCCTGCACTGGCTGCGGAACAG...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAACTGTTCCGCAGCCAGTaGAGGCCCTGTTGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQLFRSQ*RPCWEY
Trigger: GTACTCCCAACAGGGCCTGCACTGGCTGCGGAACAG...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGCTGCAGACTGAATGCTaGTGCATCCCAGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: GTGMRKQVISTIPAVGSRLQTEC*CIPGLR
Trigger: TCTGAGCCCTGGGATGCAGCAGCATTCAGTCTGCAG...CCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGAGGAACCCCAGGTTTaGGAACTCCAACGAGATGAC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAEEPQV*ELQRDD
Trigger: GTCATCTCGTTGGAGTTCCCAAACCTGGGGTTCCTC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp ATTCCTTCCCAGGAGCATCCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCCATTGCACACTTGTTTaGCCCGAGGCTGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: IPSQEHPGRVPLGDHSSSHCTLV*PEAAVC
Trigger: GCAGACAGCAGCCTCGGGCCAAACAAGTGTGCAATG...GGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGGATGCTCCTGGGAAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGGCCGCCATGGCAGGTaGCCTCTCCTGGGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNGRHGR*PLLGLK
Trigger: CTTCAGACCCAGGAGAGGCCACCTGCCATGGCGGCC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTGGGCCGCCATGGCAGGTaGCCTCTCCTGGGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: ETTVLPAQRKPSISPQRLGRHGR*PLLGLK
Trigger: CTTCAGACCCAGGAGAGGCCACCTGCCATGGCGGCC...CAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp CCCTTCCTGCTGGGCTTTAAGCCAGTTGATACCACAGTGGCTGGCGCAACTCTGTCTGCTGGACCAGGCTaGGTTTTGAAGCTAGGGATG +
Preference number: 4 (lower is better)
Translates to: PFLLGFKPVDTTVAGATLSAGPG*VLKLGM
Trigger: CATCCCTAGCTTCAAAACCCAGCCTGGTCCAGCAGA...CAGAGTTGCGCCAGCCACTGTGGTATCAACTGGCTTAAAGCCCAGCAGGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGCGGTCGGTTTCTGCTaGACCAGGCTGGGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: FHMAGEASGHLQSWRKVKAVGFC*TRLGFE
Trigger: TTCAAAACCCAGCCTGGTCCAGCAGAAACCGACCGC...CTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCCAGCCATGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp ATTCCTTCCCAGGAGCATCCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCGCGGTCGGTTTCTGCTaGACCAGGCTGGGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: IPSQEHPGRVPLGDHSSSAVGFC*TRLGFE
Trigger: TTCAAAACCCAGCCTGGTCCAGCAGAAACCGACCGC...GGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGGATGCTCCTGGGAAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GGGAAGCAAGGCACGTCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGTTTCAGGCTCCGGCTTGCTaGCAGGGACTCCCCTGTATG +
Preference number: 4 (lower is better)
Translates to: GKQGTSCRRSDVAENTGFQAPAC*QGLPCM
Trigger: CATACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTG...AAACCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGACGTGCCTTGCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp AGTCATGGGGAGTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATATGGAGAGCTTGGCCTTaGCTCTGGCAGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SHGEWSLGFSQRSTPHWIWRAWP*LWQAPA
Trigger: AGCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCA...TATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCACTCCCCATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCAATAGCAGAAAGTGGTaGAAGCCAGGTCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: GEASGHLQSWRKVKGKQGNSRKW*KPGHLP
Trigger: CGGGAGATGACCTGGCTTCCACCACTTTCTGCTATT...GCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp GAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCACGCGATGTGCCATTGTCTaGACTCTCTGGCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: EASGHLQSWRKVKGKQGTRCAIV*TLWLCI
Trigger: GATGCAGAGCCAGAGAGTCCAGACAATGGCACATCG...CGTGCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATTGCCCTCACTCTCGCTaGAGCTGCTCTCGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYCPHSR*SCSRSP
Trigger: CGGAGACCGAGAGCAGCTCCAGCGAGAGTGAGGGCA...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCCTTCTCTCTCAGGCTaGGCTGGCAAACGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHPSLSG*AGKRRG
Trigger: TCCCCGACGTTTGCCAGCCCAGCCTGAGAGAGAAGG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTATCTCGGTGCGCCTGGTaGGCTTCTTGCCCGCGGACC +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVSRCAW*ASCPRT
Trigger: GGTCCGCGGGCAAGAAGCCCACCAGGCGCACCGAGA...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCGACCACTGCCCCCGTTaGCAGCGGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIDHCPR*QRPPSA
Trigger: GGCTGAAGGAGGCCGCTGCCAACGGGGGCAGTGGTC...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAACTGGGGCAGGTGTTCTaGGATCCTGGACAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDELGQVF*DPGQEG
Trigger: ACCCTCCTGTCCAGGATCCCAGAACACCTGCCCCAG...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCCTGGGGCAGGTGTTCTaGGATCCTGGACAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETLGQVF*DPGQEG
Trigger: ACCCTCCTGTCCAGGATCCCAGAACACCTGCCCCAG...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGGGCAGGTGTTCTaGGATCCTGGACAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTLGQVF*DPGQEG
Trigger: ACCCTCCTGTCCAGGATCCCAGAACACCTGCCCCAG...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCCGCTCTCAGAGTCCTTaGTGGCAGGGGCGCTCAATA +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGRSQSP*WQGRSI
Trigger: TATTGAGCGCCCCTGCCACCAAGGACTCTGAGAGCG...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAGTGGCCGTTGGAGCCTaGAGACCACGGCTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKVAVGA*RPRLRL
Trigger: CAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCAC...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTCTTGCAGTCCCTGTaGCCGTTGGAGCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTLLQSL*PLEPGD
Trigger: GTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAG...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCTCTTGCAGTCCCTGTaGCCGTTGGAGCCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLLQSL*PLEPGD
Trigger: GTCTCCAGGCTCCAACGGCCACAGGGACTGCAAGAG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTACAGGGCGCTGGCGTTaGAGAGGCTGCCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPTGRWR*RGCPET
Trigger: GGTCTCAGGGCAGCCTCTCCAACGCCAGCGCCCTGT...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACGGGGACAGGGCGCTaGCGTTGGAGAGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLITGTGR*RWRGCP
Trigger: AGGGCAGCCTCTCCAACGCCAGCGCCCTGTCCCCGT...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTTGGCCGCCATCTGGTaGATGCGCTGTGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLAAIW*MRCGML
Trigger: CAGCATCCCACAGCGCATCCACCAGATGGCGGCCAA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACAGGAGGGCCAGGCATCGGTAACATAATGCAGCCAGTTGTTTGTCTTCTGGTGCAGTGCAGGCCCTGTTaGGAGTACTGGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: TGGPGIGNIMQPVVCLLVQCRPC*EYWTRC
Trigger: GCACCTGGTCCAGTACTCCCAACAGGGCCTGCACTG...CACCAGAAGACAAACAACTGGCTGCATTATGTTACCGATGCCTGGCCCTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671937.1
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCTGCACCCCTCTGCCTaGTTAATGAGGACTCAACTG +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLLHPSA*LMRTQL
Trigger: CAGTTGAGTCCTCATTAACCAGGCAGAGGGGTGCAG...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CACTTTGCCAGGTGCTTGAATAGCAGAAAGTGGTGGAAGCCAGGTCATCTCCTGTGTACACCCTGGCCCTaGGAGCGCAGGCTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: HFARCLNSRKWWKPGHLLCTPWP*ERRLSL
Trigger: CAAACTGAGCCTGCGCTCCCAGGGCCAGGGTGTACA...CAGGAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
3UTR CAA 72 bp TGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTaGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: WLGVSVAQCPKT*SHLWRPEPTLA
Trigger: GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGTCTGGAAAGGCAGGTaGTCAGCTCTCAGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQVWKGR*SALSSR
Trigger: ACGGGAGCTGAGAGCTGATCACCTGCCTTTCCAGAC...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317233.8
CDS-3UTR TCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAAGGGACTCCCCTGTATaGTGTGCAGTGCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQRDSPV*CAVHAG
Trigger: ACCAGCGTGCACTGCACATCATACAGGGGAGTCCCT...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACCCTGCTTGGGGATGCTaGACTTGGAGAGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHPAWGC*TWRAWP
Trigger: AGGCCAAGCTCTCCAAGTTCAGCATCCCCAAGCAGG...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CACTTTGCCAGGTGCTTGAATAGCAGAAAGTGGTGGAAGCCAGGTCATCTCCTGCCTGCTTGGGGATGCTaGACTTGGAGAGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: HFARCLNSRKWWKPGHLLPAWGC*TWRAWP
Trigger: AGGCCAAGCTCTCCAAGTTCAGCATCCCCAAGCAGG...CAGGAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCCGGAGAGCCGTTCTCTaGGCTGCCTGCTGTTCATTC +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETRRAVL*AACCSF
Trigger: GAATGAACAGCAGGCAGCTCAGAGAACGGCTCTCCG...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCGGAGAGCCGTTCTCTaGGCTGCCTGCTGTTCATTC +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTRRAVL*AACCSF
Trigger: GAATGAACAGCAGGCAGCTCAGAGAACGGCTCTCCG...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCGGCGCCGTCCCCGGCTaGGGTCCTCTCGGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCGAVPG*GPLGAP
Trigger: AGGCGCACCGAGAGGACCTCAGCCGGGGACGGCGCC...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCTGGTGGTCCTGGCGTTaGTGGAGCCTACAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIWWSWR*WSLQGP
Trigger: GGGCCCCTGTAGGCTCCATCAACGCCAGGACCACCA...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGCATCAGAGAGGGGTaGGATGGGCGACCGAAGCAT +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHCIREG*DGRPKH
Trigger: ATGCTTCGGTCGCCCATCTCACCCCTCTCTGATGCA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGGTGAGGTCTCCGCCGTaGGGCTGCAGCTGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLVRSPP*GCSWLS
Trigger: CGACAGCCAGCTGCAGCCTCACGGCGGAGACCTCAC...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCTTCGTCTGCGGCCGTaGCTTGTGGAGGGGAATGTT +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLRLRP*LVEGNV
Trigger: AACATTCCCCTCCACAAGTCACGGCCGCAGACGAAG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAACTTCGTCTGCGGCCGTaGCTTGTGGAGGGGAATGTT +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDELRLRP*LVEGNV
Trigger: AACATTCCCCTCCACAAGTCACGGCCGCAGACGAAG...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTGCGCTGTGGGATGCTaGCGATGGTCGACGGGGACA +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPCAVGC*RWSTGT
Trigger: TGTCCCCGTCGACCATCGTCAGCATCCCACAGCGCA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCCTGAGGTCAGGAGTTTaGGACGAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGLRSGV*DEPGQH
Trigger: ATGTTGGCCAGGCTCGTCTCAAACTCCTGACCTCAG...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTTCTAAATCATATGTGTaGAACTTTCTCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGSKSYV*NFLSAP
Trigger: GGGAGCTGAGAGAAAGTTTCACACATATGATTTAGA...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672756.2
CDS-3UTR TCA 90 bp ATTCCTTCCCAGGAGCATCCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGGCTGGCGCAACTCTaGAGTGTGCATGTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: IPSQEHPGRVPLGDHSSSWLAQL*SVHVQS
Trigger: ACTCTGAACATGCACACTTCAGAGTTGCGCCAGCCA...GGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGGATGCTCCTGGGAAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp CCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCTCCCAGATGAAGAGCTaGTTCCTTCCCAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: PGRVPLGDHSSSCTEETFSQMKS*FLPRSI
Trigger: GATGCTCCTGGGAAGGAATCAGCTCTTCATCTGGGA...GAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATATTTATGTCCTTCCGTCAGAGGGTGGGTaGCCAGCCTTCTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VVFGLFSKEYTALDIYVLPSEGG*PAFCQP
Trigger: GGGCTGGCAGAAGGCTGGGCACCCACCCTCTGACGG...AAGGACATAAATATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTATGTCCGCTGCTGCTGTaGTTGGCCGCCATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLCPLLL*LAAMAG
Trigger: ACCTGCCATGGCGGCCAAGCACAGCAGCAGCGGACA...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACTGTCCGCTGCTGCTGTaGTTGGCCGCCATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNCPLLL*LAAMAG
Trigger: ACCTGCCATGGCGGCCAAGCACAGCAGCAGCGGACA...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp AACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGCTTACGCGGTCGGTTTCTaGTGGACCAGGCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: NWHEEASYFHHSGSGLQAYAVGF*WTRLGF
Trigger: AAAACCCAGCCTGGTCCAGCAGAAACCGACCGCGTA...AGCCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGTTCCACTTTGCCAGGTaGTTGAATAGCAGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQFHFAR*LNSRKW
Trigger: CCACTTTCTGCTATTCAAGCACCTGGCAAAGTGGAA...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGGTTCTGCAGTTGGGCTaGTGGACCACGGCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRVLQLG*WTTALS
Trigger: TGACAGCGCCGTGGTCCAGCAGCCCAACTGCAGAAC...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGTGCTGCTGCTGCTGCTaGTGCCCTTGCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRCCCCC*CPCWKA
Trigger: TGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCA...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAGCGGGCGGGGACTTCTaGTTCACGCCTTTACTCCCA +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKAGGDF*FTPLLP
Trigger: TGGGAGTAAAGGCGTGAAGCAGAAGTCCCCGCCCGC...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGGCTCGCTCTGTTGTTaGCACAGGGCCTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTGSLCC*HRAWFW
Trigger: CCAAAACCAGGCCCTGTGGCAACAACAGAGCGAGCC...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGCTCGCTCTGTTGTTaGCACAGGGCCTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQGSLCC*HRAWFW
Trigger: CCAAAACCAGGCCCTGTGGCAACAACAGAGCGAGCC...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGGTGTGGCTGGGCGGTaGGCTCTCAGAGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNGVAGR*ALRVLG
Trigger: ACCAAGGACTCTGAGAGCGCACCGCCCAGCCACACC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACTGCTCCATGCTGCTGTaGAGGGTGACCGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNCSMLL*RVTGPM
Trigger: CATGGGGCCGGTCACCCTGCACAGCAGCATGGAGCA...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGAGTACTGGACCAGGTaGTCCATGCTGCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHEYWTR*SMLLCR
Trigger: CCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATCTGTTCCGCAGCCAGTaGAGGCCCTGTTGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNLFRSQ*RPCWEY
Trigger: GTACTCCCAACAGGGCCTGCACTGGCTGCGGAACAG...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAGGAAGAGGCTCTGGTTaGTGCTGCCCCAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGGRGSG*CCPRKE
Trigger: TTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCC...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCATGTGCATACGTGCATaGATGTGCGCGCGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGMCIRA*MCARVC
Trigger: GCACACACGCGCGCACATGCATGCACGTATGCACAT...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCGCATTCCCATCTGCGTaGCCTGGTAAGCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PGRVPLGDHSSSCTEETFAFPSA*PGKLLQ
Trigger: TTGGAGAAGCTTACCAGGGCACGCAGATGGGAATGC...GAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCGGAAGGGGGACAAACTaGCCTCTGGGTGTCGACTTC +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETGRGTN*PLGVDF
Trigger: GAAGTCGACACCCAGAGGCCAGTTTGTCCCCCTTCC...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGTTGCCTAAAGTGTTCTaGATCCGGTTGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQLPKVF*IRLESS
Trigger: TGAACTCTCCAACCGGATCCAGAACACTTTAGGCAA...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CACTTTGCCAGGTGCTTGAATAGCAGAAAGTGGTGGAAGCCAGGTCATCTCCTGTGTGTTGCTCTCTGTTaGCCGTCAGAGGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: HFARCLNSRKWWKPGHLLCVALC*PSEGGC
Trigger: GCACCCACCCTCTGACGGCCAACAGAGAGCAACACA...CAGGAGATGACCTGGCTTCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAATGTGTTGCTCTCTGTTaGCCGTCAGAGGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDECVALC*PSEGGC
Trigger: GCACCCACCCTCTGACGGCCAACAGAGAGCAACACA...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATGTGCTTGGCCGCCATaGCAGGTGGCCTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGCAWPP*QVASPG
Trigger: CCCAGGAGAGGCCACCTGCCATGGCGGCCAAGCACA...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CAAGGCACGTCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGTTTCAATGGTGGAGAGCTTGGCCTTaGCTCTGGCAGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: QGTSCRRSDVAENTGFQWWRAWP*LWQAPA
Trigger: AGCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCA...CCATTGAAACCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGACGTGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAATGCTGCTGCCCTTGCTaGAAGGCACCGAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKCCCPC*KAPRFC
Trigger: GCAGAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCA...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTATGCCCTCACTCTCGCTaGAGCTGCTCTCGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLCPHSR*SCSRSP
Trigger: CGGAGACCGAGAGCAGCTCCAGCGAGAGTGAGGGCA...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAACCTTCTCTCTCAGGCTaGGCTGGCAAACGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKPSLSG*AGKRRG
Trigger: TCCCCGACGTTTGCCAGCCCAGCCTGAGAGAGAAGG...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCCTCTCGGTGCGCCTaGTGGGCTTCTTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLSSRCA*WASCPR
Trigger: CCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGA...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATCGCAGCTCCTTGCGGTaGCTCGCTCTGTTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNRSSLR*LALLLP
Trigger: TGGCAACAACAGAGCGAGCCACCGCAAGGAGCTGCG...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGGTGTTCTGGGATCCTaGACAGGAGGGTCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHGVLGS*TGGSGR
Trigger: TCGACCTGACCCTCCTGTCCAGGATCCCAGAACACC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAACTGGGGCAGGTGTTCTaGGATCCTGGACAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKLGQVF*DPGQEG
Trigger: ACCCTCCTGTCCAGGATCCCAGAACACCTGCCCCAG...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGGCGCTCAATACCCCTaGCTCCTGGGGCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNGAQYP*LLGQVF
Trigger: GAACACCTGCCCCAGGAGCCAGGGGTATTGAGCGCC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTGGCCGTTGGAGCCTaGAGACCACGGCTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNVAVGA*RPRLRL
Trigger: CAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCAC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCTTCTGGTGTGGCATTaGGGCCTGAGTGGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLLLVWH*GLSGFL
Trigger: TAAAAACCCACTCAGGCCCCAATGCCACACCAGAAG...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCTGGTGGATGCGCTGTaGGATGCTGACGATGGTCGA +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLVDAL*DADDGR
Trigger: TCGACCATCGTCAGCATCCCACAGCGCATCCACCAG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAACTGGTGGATGCGCTGTaGGATGCTGACGATGGTCGA +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDELVDAL*DADDGR
Trigger: TCGACCATCGTCAGCATCCCACAGCGCATCCACCAG...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATTTGGCCGCCATCTGGTaGATGCGCTGTGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYLAAIW*MRCGML
Trigger: CAGCATCCCACAGCGCATCCACCAGATGGCGGCCAA...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCCCCTGTTGGGAGTACTaGACCAGGTGCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETPCWEY*TRCSML
Trigger: CAGCATGGAGCACCTGGTCCAGTACTCCCAACAGGG...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCCCTGTTGGGAGTACTaGACCAGGTGCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHPCWEY*TRCSML
Trigger: CAGCATGGAGCACCTGGTCCAGTACTCCCAACAGGG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCCCTGTTGGGAGTACTaGACCAGGTGCTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTPCWEY*TRCSML
Trigger: CAGCATGGAGCACCTGGTCCAGTACTCCCAACAGGG...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCGACCAGAGCCCACTCTaGCCCCAGGGTGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIDQSPL*PQGEVP
Trigger: AGGGACCTCACCCTGGGGCCAGAGTGGGCTCTGGTC...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCACGTTGAGCCATCTGTaGAGACCAGAGCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGTLSHL*RPEPTL
Trigger: CAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGT...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGTAATCACAACACTTTaGGAGGTGGAGGCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNVITTL*EVEAGR
Trigger: TCTACCCGCCTCCACCTCCCAAAGTGTTGTGATTAC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAGGCCCACCTGTCAAATaGGGCTTCACAGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDEGPPVK*GFTGKL
Trigger: GAGCTTCCCTGTGAAGCCCCATTTGACAGGTGGGCC...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCAAAATTAGCCGGGTGTaGTGGCACGTGCCTATCTTC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAKISRV*WHVPIF
Trigger: GAAGATAGGCACGTGCCACCACACCCGGCTAATTTT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACTCAAACTGTGAGCAGTaGTTGTCTCAGGCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNSNCEQ*LSQAEG
Trigger: CCCTTCTGCCTGAGACAACCACTGCTCACAGTTTGA...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCAACACAGGGTTTCAATaGTCAGTGGAGCTGAGACAG +
Preference number: 4 (lower is better)
Translates to: GEASGHLQSWRKVKGKQGNTGFQ*SVELRQ
Trigger: CTGTCTCAGCTCCACTGACCATTGAAACCCTGTGTT...GCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCACTTTGCCAGGTGCTTaGATAGCAGAAAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLATLPGA*IAESGG
Trigger: TCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGGAGGTGGCCAGTCTTaGAGAGCTGTCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHGGGQS*RAVFLS
Trigger: GGAGAGAAAGACAGCTCTTCAAGACTGGCCACCTCC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAATGCATCAGAGAGGGGTaGGATGGGCGACCGAAGCAT +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKCIREG*DGRPKH
Trigger: ATGCTTCGGTCGCCCATCTCACCCCTCTCTGATGCA...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCAGCGTGGTCCCTTTTaGGTCGAAACATCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHQRGPF*VETSAS
Trigger: ACTGGCGGATGTTTCGACTCAAAAGGGACCACGCTG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCCAGCGTGGTCCCTTTTaGGTCGAAACATCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETQRGPF*VETSAS
Trigger: ACTGGCGGATGTTTCGACTCAAAAGGGACCACGCTG...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCAGCGTGGTCCCTTTTaGGTCGAAACATCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTQRGPF*VETSAS
Trigger: ACTGGCGGATGTTTCGACTCAAAAGGGACCACGCTG...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCTGCGCTGTGGGATGCTaGCGATGGTCGACGGGGACA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLICAVGC*RWSTGT
Trigger: TGTCCCCGTCGACCATCGTCAGCATCCCACAGCGCA...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAACTCTGGCCCCAGGGTaGGGTCCCTATGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGTLAPG*GPYDRW
Trigger: CCACCTGTCATAGGGACCTCACCCTGGGGCCAGAGT...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCCCAGGGCTACTGGTTaGACAGGAACCCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPPRATG*TGTLWP
Trigger: TGGCCACAGGGTTCCTGTTCAACCAGTAGCCCTGGG...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTCCCAGGGCTACTGGTTaGACAGGAACCCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTPRATG*TGTLWP
Trigger: TGGCCACAGGGTTCCTGTTCAACCAGTAGCCCTGGG...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTTGGAGAGGCTGCCCTaGGACCCCACGGAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPLERLP*DPTEFP
Trigger: TGGAAACTCCGTGGGGTCTCAGGGCAGCCTCTCCAA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445815.2
ENST00000671937.1
CDS-3UTR TCA 90 bp AGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCGCATGTTCAGAGTCCTaGGTCCCTAGACCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SATRRPQFFLHRGNLPFLACSES*VPRPWA
Trigger: TGCCCAGGGTCTAGGGACTCAGGACTCTGAACATGC...GAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp ATTCCTTCCCAGGAGCATCCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTCCACAACGTTTGCTTaGTCCTACTTGACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: IPSQEHPGRVPLGDHSSSSTTFA*SYLTPG
Trigger: GCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGA...GGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGGATGCTCCTGGGAAGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp CCCTTCCTGCTGGGCTTTAAGCCAGTTGATACCACAGTGGCTGGCGCAACTCTGGAGAGGGAACTGGCATaGGGAAGCAAGTTATTTCCA +
Preference number: 4 (lower is better)
Translates to: PFLLGFKPVDTTVAGATLERELA*GSKLFP
Trigger: TGGAAATAACTTGCTTCCTCATGCCAGTTCCCTCTC...CAGAGTTGCGCCAGCCACTGTGGTATCAACTGGCTTAAAGCCCAGCAGGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCCTCTCTTACTCTGCTaGACGGGGACAGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYPLLLC*TGTAAG
Trigger: ACCAGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGG...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGCCCACCTCCACATTaGACACTTGTTTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNGPPPH*TLVWPE
Trigger: CTCGGGCCAAACAAGTGTGCAATGTGGAGGTGGGCC...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCACACAGTGTCCGCTGCTaGTGTGCTTGGCCGCCATGG +
Preference number: 4 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSHSVRC*CAWPPW
Trigger: CCATGGCGGCCAAGCACAGCAGCAGCGGACACTGTG...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCCACAGTGTCCGCTGCTaGTGTGCTTGGCCGCCATGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIHSVRC*CAWPPW
Trigger: CCATGGCGGCCAAGCACAGCAGCAGCGGACACTGTG...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCTCCCCTGTATGATGTaGAGTGCACGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLPCMM*SARWFP
Trigger: CGGAAACCAGCGTGCACTGCACATCATACAGGGGAG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAACTCCCCTGTATGATGTaGAGTGCACGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQLPCMM*SARWFP
Trigger: CGGAAACCAGCGTGCACTGCACATCATACAGGGGAG...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGAAGGCACCGAGGTTCTaGAGTTGGGCTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRKAPRF*SWAAGP
Trigger: TGGTCCAGCAGCCCAACTGCAGAACCTCGGTGCCTT...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATAAGGCACCGAGGTTCTaGAGTTGGGCTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNKAPRF*SWAAGP
Trigger: TGGTCCAGCAGCCCAACTGCAGAACCTCGGTGCCTT...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTGCTGCTGCTGCTGCTaGTGCCCTTGCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPCCCCC*CPCWKA
Trigger: TGCCTTCCAGCAAGGGCAGCAGCAGCAGCAGCAGCA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGCTGTCCTTGGCCTTTaGTCCTCCTTGCAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHAVLGL*SSLQVL
Trigger: GAGCACTTGCAAGGAGGAGCAAAGGCCAAGGACAGC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTGCGGGCGGGGACTTCTaGTTCACGCCTTTACTCCCA +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPAGGDF*FTPLLP
Trigger: TGGGAGTAAAGGCGTGAAGCAGAAGTCCCCGCCCGC...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTGCCTGGTGGGCTTCTTaGCCGCGGACCTCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLAWWAS*PRTSGQ
Trigger: CTGCCCGGAGGTCCGCGGGCAAGAAGCCCACCAGGC...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTGCTTAGCCCCCGCGTaGGGCGCTTCTCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLCLAPA*GASRRS
Trigger: TGACCTGCGAGAAGCGCCGCACGCGGGGGCTAAGCA...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGTGGCGTTGGAGAGGCTaGCCTGAGACCCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQWRWRG*PETPRS
Trigger: GCTCCGTGGGGTCTCAGGGCAGCCTCTCCAACGCCA...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTTGGCGTTGGAGAGGCTaGCCTGAGACCCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVWRWRG*PETPRS
Trigger: GCTCCGTGGGGTCTCAGGGCAGCCTCTCCAACGCCA...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTTGGCGTTGGAGAGGCTaGCCTGAGACCCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIWRWRG*PETPRS
Trigger: GCTCCGTGGGGTCTCAGGGCAGCCTCTCCAACGCCA...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCTGCTCCATGCTGCTGTaGAGGGTGACCGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLICSMLL*RVTGPM
Trigger: CATGGGGCCGGTCACCCTGCACAGCAGCATGGAGCA...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCAGATTGGCTGACAAATaGCATGTGGCTCTACAGCCA +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLARLADK*HVALQP
Trigger: TGGCTGTAGAGCCACATGGCATTTGTCAGCCAATCT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAAGAGGCTCTGGTTGCTaGTGCCCCAGAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQRGSGC*CPRKEL
Trigger: CAGTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCT...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTAGAGGCTCTGGTTGCTaGTGCCCCAGAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTRGSGC*CPRKEL
Trigger: CAGTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCT...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGGCTCTGGTTGCTaGTGCCCCAGAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETRGSGC*CPRKEL
Trigger: CAGTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTACCAGGAGGCAGAGGATaGAGTGAGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLPGGRG*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCATCCTCTGCCTCCTGG...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACAACGTGCTCCACACGTaGTCCACAGATGAAACAAGA +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNNVLHT*STDETR
Trigger: TCTTGTTTCATCTGTGGAGCACGTGTGGAGCACGTT...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACATGTGCATACGTGCATaGATGTGCGCGCGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHMCIRA*MCARVC
Trigger: GCACACACGCGCGCACATGCATGCACGTATGCACAT...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAACTGGGAGCGTGCATGTaGATACGTGCATGCATGTGC +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDELGACM*IRACMC
Trigger: GCACATGCATGCACGTATGCACATGCACGCTCCCAG...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGACGTTCTTGAAAGACTaGTGGGTGTTTCTTAGCACA +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQTFLKD*WVFLST
Trigger: TGTGCTAAGAAACACCCAGCAGTCTTTCAAGAACGT...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTATGGCGTTGGAGAGGCTaGCCTGAGACCCCACGGAGT +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVWRWRG*PETPRS
Trigger: ACTCCGTGGGGTCTCAGGGCAGCCTCTCCAACGCCA...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671937.1
CDS-3UTR CCA 90 bp GCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGAATATTTACAGAAGACGCTGCTGCTGTGCTTaGCCGCCATGGCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ANCEGSDSRASGRNIYRRRCCCA*PPWQVA
Trigger: GGCCACCTGCCATGGCGGCCAAGCACAGCAGCAGCG...TCTTCTGTAAATATTCCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAATCTTGGCCGTCCATTaGCCTCACATACGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKILAVH*PHIRGR
Trigger: CCGACCGCGTATGTGAGGCCAATGGACGGCCAAGAT...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTATGCTCTCTGAGTCGCTaGAGGAGCTGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVCSLSR*RSCCCR
Trigger: GCGGCAGCAGCAGCTCCTCCAGCGACTCAGAGAGCA...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCCACGGTCTGTGCTTTaGACAGAGGGTACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHPRSVL*TEGTPP
Trigger: AGGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGTGTTCTGGGATCCTaGACAGGAGGGTCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNGVLGS*TGGSGR
Trigger: TCGACCTGACCCTCCTGTCCAGGATCCCAGAACACC...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTACTGGGGCAGGTGTTCTaGGATCCTGGACAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLLGQVF*DPGQEG
Trigger: ACCCTCCTGTCCAGGATCCCAGAACACCTGCCCCAG...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCTGTCCGAGGTGTGGCTaGGCGGTGCGCTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLICPRCG*AVRSQS
Trigger: ACTCTGAGAGCGCACCGCCCAGCCACACCTCGGACA...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGTTTGTCTTCTGGTGTaGCATTGGGGCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTVCLLV*HWGLSG
Trigger: CCCACTCAGGCCCCAATGCCACACCAGAAGACAAAC...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGGGGAGACATGGGGGATaGGGTTCCAGTGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRGRHGG*GSSALS
Trigger: GGAAAGAGCACTGGAACCCCATCCCCCATGTCTCCC...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTACAGGGCGCTGGCGTTaGAGAGGCTGCCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIITGRWR*RGCPET
Trigger: GGTCTCAGGGCAGCCTCTCCAACGCCAGCGCCCTGT...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAACGGGGACAGGGCGCTaGCGTTGGAGAGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKTGTGR*RWRGCP
Trigger: AGGGCAGCCTCTCCAACGCCAGCGCCCTGTCCCCGT...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACACGGGGACAGGGCGCTaGCGTTGGAGAGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDTGTGR*RWRGCP
Trigger: AGGGCAGCCTCTCCAACGCCAGCGCCCTGTCCCCGT...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACTGGTTGGCCGCCATCTaGTGGATGCGCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNWLAAI*WMRCGM
Trigger: CATCCCACAGCGCATCCACCAGATGGCGGCCAACCA...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATTTGGTGATGCTGACGTaGTTGGCCGCCATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNLVMLT*LAAIWW
Trigger: CCACCAGATGGCGGCCAACCACGTCAGCATCACCAA...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACCAGTGCAGGCCCTGTTaGGAGTACTGGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNQCRPC*EYWTRC
Trigger: GCACCTGGTCCAGTACTCCCAACAGGGCCTGCACTG...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCGACCAGAGCCCACTCTaGCCCCAGGGTGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSDQSPL*PQGEVP
Trigger: AGGGACCTCACCCTGGGGCCAGAGTGGGCTCTGGTC...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCACGTTGAGCCATCTGTaGAGACCAGAGCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETTLSHL*RPEPTL
Trigger: CAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACACGTTGAGCCATCTGTaGAGACCAGAGCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHTLSHL*RPEPTL
Trigger: CAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGT...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACCAGGTCCATCTTCACTaGCAGTCAAGCTTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNQVHLH*QSSFWC
Trigger: ACACCAAAAGCTTGACTGCCAGTGAAGATGGACCTG...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCAGGTCCATCTTCACTaGCAGTCAAGCTTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAQVHLH*QSSFWC
Trigger: ACACCAAAAGCTTGACTGCCAGTGAAGATGGACCTG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACCATTTGCATACTACTTaGAGGTGGGGCTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNHLHTT*RWGWEG
Trigger: CCCTTCCCAGCCCCACCTCCAAGTAGTATGCAAATG...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACAGAAATGCATGTGGCTaGTGGGCTTGTTATCACAGG +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNRNACG*WACYHR
Trigger: CCTGTGATAACAAGCCCACCAGCCACATGCATTTCT...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCCTGACAAATGCCATGTaGCTCTACAGCCACCGAGTC +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGLTNAM*LYSHRV
Trigger: GACTCGGTGGCTGTAGAGCCACATGGCATTTGTCAG...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAGTGGCTCATGCACTTTaGGAGGCCGAGGCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKVAHAL*EAEAKG
Trigger: TCCTTTGGCCTCGGCCTCCCAAAGTGCATGAGCCAC...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
3UTR CAA 72 bp AGAATGACAAGCAAAGCGGCATCCCAGGGCTACTGGTaGAACAGGAACCCTGTGGCCATTGAGATGACCTTC +
Preference number: 4 (lower is better)
Translates to: RMTSKAASQGYW*NRNPVAIEMTF
Trigger: GAAGGTCATCTCAATGGCCACAGGGTTCCTGTTCAACCAGTAGCCCTGGGATGCCGCTTTGCTTGTCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
3UTR CAA 72 bp CACAGAGGAAACCTTCCATTTCTCCACAACGTTTGCTaGATCCTACTTGACTCCAGGCCCTTCCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: HRGNLPFLHNVC*ILLDSRPFLLG
Trigger: GCCCAGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCTGGTTCTGGGCTCTTaGATCTGCAACAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLALVLGS*ICNKMF
Trigger: GAACATTTTGTTGCAGATTCAAGAGCCCAGAACCAG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp CAAGGCACGTCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGTTTCAATGGAGGGACTCCCCTGTATaGTGTGCAGTGCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: QGTSCRRSDVAENTGFQWRDSPV*CAVHAG
Trigger: ACCAGCGTGCACTGCACATCATACAGGGGAGTCCCT...CCATTGAAACCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGACGTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCCGGAGCTGCTCTCTaGGTCGCTGGAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLSGAAL*VAGGAA
Trigger: AGCAGCTCCTCCAGCGACTCAGAGAGCAGCTCCGGA...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp AGAATATCAGTGAATGTTTATGGATCAGCATCTAGTCTAAGTATTTTGTGCCGTGGCGCCGTCCCCGGCTaGGGTCCTCTCGGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: RISVNVYGSASSLSILCRGAVPG*GPLGAP
Trigger: AGGCGCACCGAGAGGACCTCAGCCGGGGACGGCGCC...ACGGCACAAAATACTTAGACTAGATGCTGATCCATAAACATTCACTGATATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TATATTAATACTGAAAGTAATCAACAGTATAAGAGCAGGTCCATCTTCACTGGCGGCGCCGTCCCCGGCTaGGGTCCTCTCGGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: YINTESNQQYKSRSIFTGGAVPG*GPLGAP
Trigger: AGGCGCACCGAGAGGACCTCAGCCGGGGACGGCGCC...GCCAGTGAAGATGGACCTGCTCTTATACTGTTGATTACTTTCAGTATTAATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAATGGTGGTCCTGGCGTTaGTGGAGCCTACAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKWWSWR*WSLQGP
Trigger: GGGCCCCTGTAGGCTCCATCAACGCCAGGACCACCA...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR TCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAACTCCCTGGGACTTCTTaGTCTCCCTGTAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDELPGTS*SPCSRL
Trigger: AAGACGACTACAGGGAGATCAAGAAGTCCCAGGGAG...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGGTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTTTGGAGAGGCTGCCCTaGGACCCCACGGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: GYLVTCNLVNFRHKNTWLLERLP*DPTELA
Trigger: CGCCAGCTCCGTGGGGTCTCAGGGCAGCCTCTCCAA...AAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGAGGGTGAGGTCCCTATaGCAGGTGGGCGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQRVRSL*QVGAVP
Trigger: CGGAACAGCGCCCACCTGTCATAGGGACCTCACCCT...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAAAGAAGGTGTGTTCTaGAGAGCTGTGTATCTTACA +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQKEGVF*RAVYLT
Trigger: TGTAAGATACACAGCTCTTCAGAACACACCTTCTTT...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGATTCAGGCTCCTACTaGAGGGACAATCTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLDSGSY*RDNLGN
Trigger: ATTACCTAGATTGTCCCTTCAGTAGGAGCCTGAATC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTGGCGGGACAATCACTTaGACCCAGGAGGCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTGGTIT*TQEAED
Trigger: ATCCTCTGCCTCCTGGGTTCAAGTGATTGTCCCGCC...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCTGAGGTCAGGAGTTTaGGACGAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYLRSGV*DEPGQH
Trigger: ATGTTGGCCAGGCTCGTCTCAAACTCCTGACCTCAG...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAACTGCACTTCCAAGTTaGTGCGAACACGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGTALPS*CEHAVT
Trigger: AGTCACTGCGTGTTCGCATCAACTTGGAAGTGCAGT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAATTGTGTGCAGTTCCCTaGCTGCACACAAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDELCAVP*LHTSQG
Trigger: TCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAA...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATCACCCATCTCTGGGATaGGGAGTTCTCCATGGTGAC +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNHPSLG*GVLHGD
Trigger: GTCACCATGGAGAACTCCTCATCCCAGAGATGGGTG...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp ATTCCTTCCCAGGAGCATCCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCGAAACATATTCCTCCTaGGGGATGCAAGATCTCACC +
Preference number: 4 (lower is better)
Translates to: IPSQEHPGRVPLGDHSSSETYSS*GMQDLT
Trigger: GGTGAGATCTTGCATCCCTCAGGAGGAATATGTTTC...GGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGGATGCTCCTGGGAAGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp GGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGTGCGCTTGCAAATTGTaGAGGATCAGATTCACGTGC +
Preference number: 4 (lower is better)
Translates to: GTGMRKQVISTIPAVGSRCACKL*RIRFTC
Trigger: GCACGTGAATCTGATCCTTCACAATTTGCAAGCGCA...CCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp AGTCATGGGGAGTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATACTGCACGGGGACAGCTaGTGGTGTGGAAGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: SHGEWSLGFSQRSTPHWILHGDS*WCGSCS
Trigger: ACTACAACTTCCACACCAGCAGCTGTCCCCGTGCAG...TATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCACTCCCCATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTCCGTCAGAGGGTGGGTaGCCAGCCTTCTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIPSEGG*PAFCQP
Trigger: GGGCTGGCAGAAGGCTGGGCACCCACCCTCTGACGG...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AGGAACCCTGTGGCCATTGAGATGACCTTCTCAAGCTTCCTGTTGAGCCTTCACAGAGCCCTGTTGTGTTaGTCTCTGTTGGCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: RNPVAIEMTFSSFLLSLHRALLC*SLLAVR
Trigger: TCTGACGGCCAACAGAGAGCAACACAACAGGGCTCT...GTGAAGGCTCAACAGGAAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCTGTTGTGTTaGTCTCTGTTGGCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETRALLC*SLLAVR
Trigger: TCTGACGGCCAACAGAGAGCAACACAACAGGGCTCT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATCTCCCCTGTATGATGTaGAGTGCACGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNLPCMM*SARWFP
Trigger: CGGAAACCAGCGTGCACTGCACATCATACAGGGGAG...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACTGGCAGGCTCCGGCTTaGTGGCAGGGACTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDWQAPA*WQGLPC
Trigger: ACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCA...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAATGGCAGGCTCCGGCTTaGTGGCAGGGACTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKWQAPA*WQGLPC
Trigger: ACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCA...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TGGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGTGGACTCTCTGGCTCTaGATCACCTTTCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: WGGLRTLTIMAEGEGEARWTLWL*ITFLWI
Trigger: AATCCAAAGAAAGGTGATGCAGAGCCAGAGAGTCCA...CCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGCCGTTCTCTGAGCTaGCTGCTGTTCATTCTCCTC +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETSRSLS*LLFILL
Trigger: GAGGAGAATGAACAGCAGGCAGCTCAGAGAACGGCT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTATGCTGCTGCTGCCCTTaGTGGAAGGCACCGAGGTTC +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVCCCCP*WKAPRF
Trigger: GAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCA...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTAAGTCAGATCCGGAGCTaGTCTCTGAGTCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLSQIRS*SLSRWR
Trigger: CCTCCAGCGACTCAGAGAGCAGCTCCGGATCTGACT...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTAGTCAGATCCGGAGCTaGTCTCTGAGTCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPSQIRS*SLSRWR
Trigger: CCTCCAGCGACTCAGAGAGCAGCTCCGGATCTGACT...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTACCACTTGTTAGAGGATaGCGGTTCAGCCTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLPLVRG*RFSLGA
Trigger: AGCCCCGAGGCTGAACCGGCATCCTCTAACAAGTGG...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCCACTTGTTAGAGGATaGCGGTTCAGCCTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPPLVRG*RFSLGA
Trigger: AGCCCCGAGGCTGAACCGGCATCCTCTAACAAGTGG...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACTGCTTAGCCCCCGCGTaGGGCGCTTCTCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDCLAPA*GASRRS
Trigger: TGACCTGCGAGAAGCGCCGCACGCGGGGGCTAAGCA...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGATTTGGGGACGATCCTaGTTAGCCCCCGCGTGCGGC +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQIWGRS*LAPACG
Trigger: GCCGCACGCGGGGGCTAAGCAGGATCGTCCCCAAAT...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTATTTGGGGACGATCCTaGTTAGCCCCCGCGTGCGGC +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVIWGRS*LAPACG
Trigger: GCCGCACGCGGGGGCTAAGCAGGATCGTCCCCAAAT...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGGCAGCCACGGTCTGTaGTTTGGACAGAGGGTACTC +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNGSHGL*FGQRVL
Trigger: GAGTACCCTCTGTCCAAAGCACAGACCGTGGCTGCC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTAGGCAGCCACGGTCTGTaGTTTGGACAGAGGGTACTC +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLGSHGL*FGQRVL
Trigger: GAGTACCCTCTGTCCAAAGCACAGACCGTGGCTGCC...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGGCAAAGCCTTTTCTaGAGGTGTGTCCGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHWQSLF*RCVRGV
Trigger: CACACCTCGGACACACCTGCAGAAAAGGCTTTGCCA...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGACCACGGCTTCGTCTaGGGCCGTGACTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVDHGFV*GRDLWR
Trigger: CCTCCACAAGTCACGGCCGCAGACGAAGCCGTGGTC...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTAAACTTTTCCACCATTaGATCTGCTTTATGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGKLFHH*ICFMLH
Trigger: ATGAAGCATAAAGCAGATGCAATGGTGGAAAAGTTT...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCTGCTCCATGCTGCTGTaGAGGGTGACCGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSCSMLL*RVTGPM
Trigger: CATGGGGCCGGTCACCCTGCACAGCAGCATGGAGCA...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCCTGTTCCGCAGCCAGTaGAGGCCCTGTTGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLILFRSQ*RPCWEY
Trigger: GTACTCCCAACAGGGCCTGCACTGGCTGCGGAACAG...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLANLSAI*ILLGGG
Trigger: CCCACCTCCAAGTAGTATGCAAATGGCACTGAGATT...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCAATCTCAGTGCCATTTaGATACTACTTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLNLSAI*ILLGGG
Trigger: CCCACCTCCAAGTAGTATGCAAATGGCACTGAGATT...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGAAGAGGCTCTGGTTaGTGCTGCCCCAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNGRGSG*CCPRKE
Trigger: TTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCC...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCACATATTACACCGCCTaGCTTTCTCAGACCGTCCTG +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGTYYTA*LSQTVL
Trigger: CAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGCCAGACCCGGTCTTAATATTTCCAAATaGTTGAAGGCCAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: GAMIAPPHSSLGYRARPGLNISK*LKAKAK
Trigger: TTTGGCTTTGGCCTTCAAGCATTTGGAAATATTAAG...ACCGGGTCTGGCTCTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATGAAGCTCTCCAGGTATaGAGGATAGACCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYEALQV*RIDLQG
Trigger: GCCCTGGAGGTCTATCCTGCATACCTGGAGAGCTTC...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCCATCAATACCCCTGGTaGTTCAACACAAATGCTGAC +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAHQYPW*FNTNAD
Trigger: GTCAGCATTTGTGTTGAAGCACCAGGGGTATTGATG...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACTTGCCTAAAGTGTTCTaGATCCGGTTGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNLPKVF*IRLESS
Trigger: TGAACTCTCCAACCGGATCCAGAACACTTTAGGCAA...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCGACGAGGGCTGGTTCTaGGCTCTTGAATCTGCAACA +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETDEGWF*ALESAT
Trigger: TGTTGCAGATTCAAGAGCCCAGAACCAGCCCTCGTC...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAAATGTGGGCCATCAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATCACGGGGACAGCTGCTaGTGTGGAAGTTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: GNVGHQSADKTLLAHLSNHGDSC*CGSCSA
Trigger: AGCACTACAACTTCCACACCAGCAGCTGTCCCCGTG...ATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTGATGGCCCACATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCACGGGGACAGCTGCTaGTGTGGAAGTTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYHGDSC*CGSCSA
Trigger: AGCACTACAACTTCCACACCAGCAGCTGTCCCCGTG...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGTTGGCCGTCAGAGGGTaGGTGCCCAGCCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQLAVRG*VPSLLP
Trigger: TGGCAGAAGGCTGGGCACCCACCCTCTGACGGCCAA...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATATTTATGTCCTTTTGGCCGTCAGAGGGTaGGTGCCCAGCCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VVFGLFSKEYTALDIYVLLAVRG*VPSLLP
Trigger: TGGCAGAAGGCTGGGCACCCACCCTCTGACGGCCAA...AAGGACATAAATATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTATGTGTTGCTCTCTGTTaGCCGTCAGAGGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLCVALC*PSEGGC
Trigger: GCACCCACCCTCTGACGGCCAACAGAGAGCAACACA...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACTGTGTTGCTCTCTGTTaGCCGTCAGAGGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNCVALC*PSEGGC
Trigger: GCACCCACCCTCTGACGGCCAACAGAGAGCAACACA...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CAAGGCACGTCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGTTTCAATGGATCTTGGCCGTCCATTaGCCTCACATACGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: QGTSCRRSDVAENTGFQWILAVH*PHIRGR
Trigger: CCGACCGCGTATGTGAGGCCAATGGACGGCCAAGAT...CCATTGAAACCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGACGTGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTCAGGCTCCGGCTTGCTaGCAGGGACTCCCCTGTATG +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVQAPAC*QGLPCM
Trigger: CATACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTG...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATATTTATGTCCTTCAGGCTCCGGCTTGCTaGCAGGGACTCCCCTGTATG +
Preference number: 4 (lower is better)
Translates to: VVFGLFSKEYTALDIYVLQAPAC*QGLPCM
Trigger: CATACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTG...AAGGACATAAATATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTCAGGCTCCGGCTTGCTaGCAGGGACTCCCCTGTATG +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIQAPAC*QGLPCM
Trigger: CATACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTG...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGCTTGGCCTTGGCTCTaGCAGGCTCCGGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDAWPWL*QAPACW
Trigger: CCAGCAAGCCGGAGCCTGCCAGAGCCAAGGCCAAGC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCTGGAGAGCTTGGCCTTaGCTCTGGCAGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSWRAWP*LWQAPA
Trigger: AGCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCA...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGTGGAGAGCTTGGCCTTaGCTCTGGCAGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQWRAWP*LWQAPA
Trigger: AGCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCA...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCAATAGCAGAAAGTGGTaGAAGCCAGGTCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGNSRKW*KPGHLP
Trigger: CGGGAGATGACCTGGCTTCCACCACTTTCTGCTATT...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCACTTGAATAGCAGAAAGTaGTGGAAGCCAGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: GGLRTLTIMAEGEGEARHLNSRK*WKPGHL
Trigger: GAGATGACCTGGCTTCCACCACTTTCTGCTATTCAA...GTGCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGAGAATAGGAGGCTTGTaGGGATTAACTTTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQRIGGL*GLTLFS
Trigger: GCTAAACAAAGTTAATCCCCACAAGCCTCCTATTCT...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACTTGCTCTCTGACCCGTaGCTTTCATTTTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNLLSDP*LSFWIR
Trigger: TCTGATCCAAAATGAAAGCCACGGGTCAGAGAGCAA...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAACTTTCCCACAGTCCTaGACGTCCTCTTTCACCGGG +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKTFPQS*TSSFTG
Trigger: CCCGGTGAAAGAGGACGTCCAGGACTGTGGGAAAGT...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAACTTGTTGGCTGTCCTTaGCCTTTGCTCCTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDELVGCP*PLLLLA
Trigger: TGCAAGGAGGAGCAAAGGCCAAGGACAGCCAACAAG...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTATCCCAGGGGCCTTGTTaGCTGTCCTTGGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLSQGPC*LSLAFA
Trigger: AGCAAAGGCCAAGGACAGCCAACAAGGCCCCTGGGA...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTTCCCAGGGGCCTTGTTaGCTGTCCTTGGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTSQGPC*LSLAFA
Trigger: AGCAAAGGCCAAGGACAGCCAACAAGGCCCCTGGGA...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCATCCTCTCGGTGCGCCTaGTGGGCTTCTTGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRASSRCA*WASCPR
Trigger: CCGCGGGCAAGAAGCCCACCAGGCGCACCGAGAGGA...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGACCACTGCCCCCGTTaGCAGCGGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIDHCPR*QRPPSA
Trigger: GGCTGAAGGAGGCCGCTGCCAACGGGGGCAGTGGTC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGGGCGCTCAATACCCCTaGCTCCTGGGGCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLGAQYP*LLGQVF
Trigger: GAACACCTGCCCCAGGAGCCAGGGGTATTGAGCGCC...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTTGTCCGAGGTGTGGCTaGGCGGTGCGCTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVCPRCG*AVRSQS
Trigger: ACTCTGAGAGCGCACCGCCCAGCCACACCTCGGACA...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTGCGGCCGTGACTTGTaGAGGGGAATGTTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNCGRDL*RGMFSE
Trigger: TTCTGAAAACATTCCCCTCCACAAGTCACGGCCGCA...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCGTGGCCGTTGGAGCCTaGAGACCACGGCTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSVAVGA*RPRLRL
Trigger: CAGACGAAGCCGTGGTCTCCAGGCTCCAACGGCCAC...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCGAGATTTGGATTCCATaGGGCCTTGTTCCATTGCAT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAEIWIP*GLVPLH
Trigger: ATGCAATGGAACAAGGCCCCATGGAATCCAAATCTC...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTGGGAGACATGGGGGATaGGGTTCCAGTGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTGRHGG*GSSALS
Trigger: GGAAAGAGCACTGGAACCCCATCCCCCATGTCTCCC...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACTTGGTGATGCTGACGTaGTTGGCCGCCATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNLVMLT*LAAIWW
Trigger: CCACCAGATGGCGGCCAACCACGTCAGCATCACCAA...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTTGGTGATGCTGACGTaGTTGGCCGCCATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPLVMLT*LAAIWW
Trigger: CCACCAGATGGCGGCCAACCACGTCAGCATCACCAA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAATTCTCGGTTTTCCTTaGCCAGGTTGTCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGILGFP*PGCRPS
Trigger: AGATGGCCGACAACCTGGCCAAGGAAAACCGAGAAT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGTCTAGCCTGGGATTATaGAAACTAGACAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQSSLGL*KLDKEG
Trigger: ACCTTCTTTGTCTAGTTTCCATAATCCCAGGCTAGA...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGCAACTTTCAAGGTaGGCAGGACCAGAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTLQLSR*AGPEKL
Trigger: GAGCTTCTCTGGTCCTGCCCACCTTGAAAGTTGCAG...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAAAAATTAGCCGGGTGTaGTGGCACGTGCCTATCTTC +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGKISRV*WHVPIF
Trigger: GAAGATAGGCACGTGCCACCACACCCGGCTAATTTT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GGGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGCACTCCTGCATCTGCTaGCTGATGACTGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: GNWHEEASYFHHSGSGLQHSCIC*LMTEIP
Trigger: TGGAATTTCAGTCATCAGCCAGCAGATGCAGGAGTG...CTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGGCATCCCAGGGCTACTaGTTGAACAGGAACCCTGTG +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRASQGY*LNRNPV
Trigger: CACAGGGTTCCTGTTCAACCAGTAGCCCTGGGATGC...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAATGTCCCACCCATCTCTaGGATGAGGAGTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQCPTHL*DEEFSM
Trigger: CATGGAGAACTCCTCATCCCAGAGATGGGTGGGACA...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGAGTATCAAGCTCAGTaGTTGGTGAAGCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNEYQAQ*LVKQSQ
Trigger: TTGGCTTTGCTTCACCAACCACTGAGCTTGATACTC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTCCCAGGAGCATCCTaGGAGAGTGCCACTAGGAGA +
Preference number: 4 (lower is better)
Translates to: LGDHSSSCTEETFHFSTTFPGAS*ESATRR
Trigger: TCTCCTAGTGGCACTCTCCCAGGATGCTCCTGGGAA...CGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp CCTGGGAGAGTGCCACTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCAATAGCAGAAAGTGGTaGAAGCCAGGTCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: PGRVPLGDHSSSCTEETFNSRKW*KPGHLL
Trigger: CAGGAGATGACCTGGCTTCCACCACTTTCTGCTATT...GAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAGTGGCACTCTCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGAAGGGACTCCCCTGTATaGTGTGCAGTGCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGRDSPV*CAVHAG
Trigger: ACCAGCGTGCACTGCACATCATACAGGGGAGTCCCT...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGTCATCTTCCAGCATTaGTGTATTCGATGTGCCATT +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLVIFQH*CIRCAI
Trigger: AATGGCACATCGAATACATCAATGCTGGAAGATGAC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACTCCGGAGCTGCTCTCTaGGTCGCTGGAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDSGAAL*VAGGAA
Trigger: AGCAGCTCCTCCAGCGACTCAGAGAGCAGCTCCGGA...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGGTGGTCCTGGCGTTaGTGGAGCCTACAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKWWSWR*WSLQGP
Trigger: GGGCCCCTGTAGGCTCCATCAACGCCAGGACCACCA...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR TCA 90 bp CACCGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAACTCCCTGGGACTTCTTaGTCTCCCTGTAGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: HRSLINAVAGSFSSTVSKLPGTS*SPCSRL
Trigger: AAGACGACTACAGGGAGATCAAGAAGTCCCAGGGAG...TTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTGGAGGTGGCCAGTCTTaGAGAGCTGTCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPGGGQS*RAVFLS
Trigger: GGAGAGAAAGACAGCTCTTCAAGACTGGCCACCTCC...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGTGAGGTCTCCGCCGTaGGGCTGCAGCTGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSVRSPP*GCSWLS
Trigger: CGACAGCCAGCTGCAGCCTCACGGCGGAGACCTCAC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTGGCCTTTTCAGAATTGTTGTaGGCTGCTTTCGTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: AQCPKTLSHLWRPEPTLAFSELL*AAFVRS
Trigger: AGACCTCACGAAAGCAGCTCACAACAATTCTGAAAA...GGCCAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR TCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAATGCGCTGTGGGATGCTaGCGATGGTCGACGGGGACA +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKCAVGC*RWSTGT
Trigger: TGTCCCCGTCGACCATCGTCAGCATCCCACAGCGCA...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAACTCTGGCCCCAGGGTaGGGTCCCTATGACAGGTGG +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKTLAPG*GPYDRW
Trigger: CCACCTGTCATAGGGACCTCACCCTGGGGCCAGAGT...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAACTTCAACTCCTAACTaGGCTCCAACACACAGGCAC +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQTSTPN*APTHRH
Trigger: GTGCCTGTGTGTTGGAGCTCAGTTAGGAGTTGAAGT...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCCCCAGAAAGGAACTGTaGTCTTCTGCATTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGPRKEL*SSALQA
Trigger: TGCTTGCAATGCAGAAGATCACAGTTCCTTTCTGGG...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGACCCAGAAAGGAACTGTaGTCTTCTGCATTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGPRKEL*SSALQA
Trigger: TGCTTGCAATGCAGAAGATCACAGTTCCTTTCTGGG...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATGGCGGGACAATCACTTaGACCCAGGAGGCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHGGTIT*TQEAED
Trigger: ATCCTCTGCCTCCTGGGTTCAAGTGATTGTCCCGCC...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGAACCCTGTGGCCATTaGGATGACCTTCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTEPCGH*DDLLKL
Trigger: AAGCTTGAGAAGGTCATCTCAATGGCCACAGGGTTC...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACCACCCATCTCTGGGATaGGGAGTTCTCCATGGTGAC +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNHPSLG*GVLHGD
Trigger: GTCACCATGGAGAACTCCTCATCCCAGAGATGGGTG...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTTGGAGAGGCTGCCCTaGGACCCCACGGAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLLERLP*DPTEFP
Trigger: TGGAAACTCCGTGGGGTCTCAGGGCAGCCTCTCCAA...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445815.2
ENST00000671937.1
CDS-3UTR TCA 90 bp CTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTGCACAGCATTACTaGAGCAGACCCTGGGGTACC +
Preference number: 4 (lower is better)
Translates to: LGDHSSSCTEETFHFSTTFAQHY*SRPWGT
Trigger: GGTACCCCAGGGTCTGCTTCAGTAATGCTGTGCAAA...CGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp TCTCTCTCCAGGCACGATTCTGCACATGAGTCTGATCTGTGTAGAGTAGTATCAGTGCCTCTCTTACTCTaGTGCACGGGGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLSRHDSAHESDLCRVVSVPLLL*CTGTAA
Trigger: AGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGGCAC...TGATACTACTCTACACAGATCAGACTCATGTGCAGAATCGTGCCTGGAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AATAAGTATGCGCTTGCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGGTGCCTCTCTTACTCTaGTGCACGGGGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NKYALANCEGSDSRASGRVPLLL*CTGTAA
Trigger: AGCAGCTGTCCCCGTGCAGCAGAGTAAGAGAGGCAC...CCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGCAAGCGCATACTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTATGTTTGGCCCGAGGCTaGTGTCTGCCAACACCATCT +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLCLARG*CLPTPS
Trigger: AGATGGTGTTGGCAGACAGCAGCCTCGGGCCAAACA...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTGAACACAGTGTCCGCTaGTGCTGTGCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIEHSVR*CCAWPP
Trigger: TGGCGGCCAAGCACAGCAGCAGCGGACACTGTGTTC...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTACGCGGTCGGTTTCTaGTGGACCAGGCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPYAVGF*WTRLGF
Trigger: AAAACCCAGCCTGGTCCAGCAGAAACCGACCGCGTA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTCCCCTGTATGATGTaGAGTGCACGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPLPCMM*SARWFP
Trigger: CGGAAACCAGCGTGCACTGCACATCATACAGGGGAG...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TATAAAGAAACAAATTTAATTGACTCACAGTTCCACATGGCTGGGGAGGCCTCATGGCAGGCTCCGGCTTaGTGGCAGGGACTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: YKETNLIDSQFHMAGEASWQAPA*WQGLPC
Trigger: ACAGGGGAGTCCCTGCCAGCAAGCCGGAGCCTGCCA...TGAGGCCTCCCCAGCCATGTGGAACTGTGAGTCAATTAAATTTGTTTCTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR GCA 90 bp ACAGTTCCACATGGCTGGGGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTTTCCACTTTGCCAGGTaGTTGAATAGCAGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: TVPHGWGGLRTLTIMAEGFHFAR*LNSRKW
Trigger: CCACTTTCTGCTATTCAAGCACCTGGCAAAGTGGAA...ACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCCCCAGCCATGTGGAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR GCA 90 bp GGAGGCCTCAGGACACTTACAATCATGGCGGAAGGTGAAGGGGAAGCAAGGCACTTGATGTATTCGATGTaGCATTGTCTGGACTCTCTG +
Preference number: 4 (lower is better)
Translates to: GGLRTLTIMAEGEGEARHLMYSM*HCLDSL
Trigger: CAGAGAGTCCAGACAATGGCACATCGAATACATCAA...GTGCCTTGCTTCCCCTTCACCTTCCGCCATGATTGTAAGTGTCCTGAGGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR GCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGTTCTGCAGTTGGGCTaGTGGACCACGGCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVVLQLG*WTTALS
Trigger: TGACAGCGCCGTGGTCCAGCAGCCCAACTGCAGAAC...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCCCACTTGTTAGAGGATaGCGGTTCAGCCTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIPLVRG*RFSLGA
Trigger: AGCCCCGAGGCTGAACCGGCATCCTCTAACAAGTGG...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTAGCTGTCCTTGGCCTTTaGTCCTCCTTGCAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLAVLGL*SSLQVL
Trigger: GAGCACTTGCAAGGAGGAGCAAAGGCCAAGGACAGC...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAGGCTCGCTCTGTTGTTaGCACAGGGCCTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVGSLCC*HRAWFW
Trigger: CCAAAACCAGGCCCTGTGGCAACAACAGAGCGAGCC...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGAGGAGCGCAGCTCCTTaGGGTGGCTCGCTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLRSAAP*GGSLCC
Trigger: ACAACAGAGCGAGCCACCGCAAGGAGCTGCGCTCCT...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCTTAGCCCCCGCGTaGGGCGCTTCTCGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKCLAPA*GASRRS
Trigger: TGACCTGCGAGAAGCGCCGCACGCGGGGGCTAAGCA...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAATTTGGGGACGATCCTaGTTAGCCCCCGCGTGCGGC +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKIWGRS*LAPACG
Trigger: GCCGCACGCGGGGGCTAAGCAGGATCGTCCCCAAAT...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGGTGTGGCTGGGCGGTaGGCTCTCAGAGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDGVAGR*ALRVLG
Trigger: ACCAAGGACTCTGAGAGCGCACCGCCCAGCCACACC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACGACCACGGCTTCGTCTaGGGCCGTGACTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDDHGFV*GRDLWR
Trigger: CCTCCACAAGTCACGGCCGCAGACGAAGCCGTGGTC...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCTCGAAGACAAGTTTCTaGCTCTTGCAGTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETSKTSF*LLQSLW
Trigger: CCACAGGGACTGCAAGAGGCAGAAACTTGTCTTCGA...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp GGTTGTCTCAGGCAGAAGGGACAACCAGGGACTTACACTTTCTACTTTCTACATGAGTACTGGACCAGGTaGTCCATGCTGCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GCLRQKGQPGTYTFYFLHEYWTR*SMLLCR
Trigger: CCTGCACAGCAGCATGGAGCACCTGGTCCAGTACTC...ATGTAGAAAGTAGAAAGTGTAAGTCCCTGGTTGTCCCTTCTGCCTGAGACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCTTTGGTGTGCTGTATTaGACCTGGTTAACTAACCCA +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLFGVLY*TWLTNP
Trigger: TGGGTTAGTTAACCAGGTGCAATACAGCACACCAAA...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAAACGCATCAAAGGGCTaGAGGTGCACATTCTGCATG +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDENASKG*RCTFCM
Trigger: CATGCAGAATGTGCACCTGCAGCCCTTTGATGCGTT...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACAGAGGCTCTGGTTGCTaGTGCCCCAGAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNRGSGC*CPRKEL
Trigger: CAGTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCT...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp CGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAACATATTACACCGCCTaGCTTTCTCAGACCGTCCTG +
Preference number: 4 (lower is better)
Translates to: RLPFSDRPGATLSSKRPQTYYTA*LSQTVL
Trigger: CAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT...TTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGCCAGGAGGCAGAGGATaGAGTGAGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLPGGRG*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCATCCTCTGCCTCCTGG...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR GCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCTCCCACATAGGGGATaGTTCATGTCAAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYLPHRG*FMSSHW
Trigger: CCAGTGGCTTGACATGAAGCATCCCCTATGTGGGAG...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAATCTTCTGCACCCCTCTaGCTGGTTAATGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDESSAPL*LVNEDS
Trigger: TGAGTCCTCATTAACCAGGCAGAGGGGTGCAGAAGA...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp GGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGTTGCCTAAAGTGTTCTaGATCCGGTTGGAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: GTGMRKQVISTIPAVGSRLPKVF*IRLESS
Trigger: TGAACTCTCCAACCGGATCCAGAACACTTTAGGCAA...CCTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp AGTCATGGGGAGTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATAGAGGAACCCCAGGTTTaGGAACTCCAACGAGATGAC +
Preference number: 4 (lower is better)
Translates to: SHGEWSLGFSQRSTPHWIEEPQV*ELQRDD
Trigger: GTCATCTCGTTGGAGTTCCCAAACCTGGGGTTCCTC...TATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCACTCCCCATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp CTAGGAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGGACGAGGGCTGGTTCTaGGCTCTTGAATCTGCAACA +
Preference number: 4 (lower is better)
Translates to: LGDHSSSCTEETFHFSTTDEGWF*ALESAT
Trigger: TGTTGCAGATTCAAGAGCCCAGAACCAGCCCTCGTC...CGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR CCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTCACGGGGACAGCTGCTaGTGTGGAAGTTGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTHGDSC*CGSCSA
Trigger: AGCACTACAACTTCCACACCAGCAGCTGTCCCCGTG...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACGCTGCTGCTGTGCTTaGCCGCCATGGCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSRCCCA*PPWQVA
Trigger: GGCCACCTGCCATGGCGGCCAAGCACAGCAGCAGCG...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAATAATCTGGACAAAGGGAACACAAATCTCAAGTCTGAACATTTCTTGTGCCGCTGCTGCTGTGCTTaGCCGCCATGGCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QNNLDKGNTNLKSEHFLCRCCCA*PPWQVA
Trigger: GGCCACCTGCCATGGCGGCCAAGCACAGCAGCAGCG...GCACAAGAAATGTTCAGACTTGAGATTTGTGTTCCCTTTGTCCAGATTATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGCTTGGCCTTGGCTCTaGCAGGCTCCGGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIAWPWL*QAPACW
Trigger: CCAGCAAGCCGGAGCCTGCCAGAGCCAAGGCCAAGC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAGCTTGGCCTTGGCTCTaGCAGGCTCCGGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAAWPWL*QAPACW
Trigger: CCAGCAAGCCGGAGCCTGCCAGAGCCAAGGCCAAGC...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACTGGAGAGCTTGGCCTTaGCTCTGGCAGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDWRAWP*LWQAPA
Trigger: AGCCGGAGCCTGCCAGAGCCAAGGCCAAGCTCTCCA...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCCCGAGGTTCTGCAGTTaGGCTGCTGGACCACGGCGC +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCPRFCS*AAGPRR
Trigger: GCGCCGTGGTCCAGCAGCCCAACTGCAGAACCTCGG...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp TCATCACATAGATGTTACAACAAAGTCTGCAACTTTCAAGGTGGGCAGGACCAGCCTTCTCTCTCAGGCTaGGCTGGCAAACGTCGGGGA +
Preference number: 4 (lower is better)
Translates to: SSHRCYNKVCNFQGGQDQPSLSG*AGKRRG
Trigger: TCCCCGACGTTTGCCAGCCCAGCCTGAGAGAGAAGG...CTGGTCCTGCCCACCTTGAAAGTTGCAGACTTTGTTGTAACATCTATGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCATCTCGGTGCGCCTGGTaGGCTTCTTGCCCGCGGACC +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSSRCAW*ASCPRT
Trigger: GGTCCGCGGGCAAGAAGCCCACCAGGCGCACCGAGA...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTCGCAGCTCCTTGCGGTaGCTCGCTCTGTTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVRSSLR*LALLLP
Trigger: TGGCAACAACAGAGCGAGCCACCGCAAGGAGCTGCG...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR CCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACCCACGGTCTGTGCTTTaGACAGAGGGTACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNPRSVL*TEGTPP
Trigger: AGGAGGAGTACCCTCTGTCCAAAGCACAGACCGTGG...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TACAAACACACATGCCCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCAGACCACTGCCCCCGTTaGCAGCGGCCTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: YKHTCPAKDHCSMLRKCSDHCPR*QRPPSA
Trigger: GGCTGAAGGAGGCCGCTGCCAACGGGGGCAGTGGTC...TGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGGGCATGTGTGTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCGGTGTTCTGGGATCCTaGACAGGAGGGTCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIGVLGS*TGGSGR
Trigger: TCGACCTGACCCTCCTGTCCAGGATCCCAGAACACC...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAGGCGCTCAATACCCCTaGCTCCTGGGGCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKGAQYP*LLGQVF
Trigger: GAACACCTGCCCCAGGAGCCAGGGGTATTGAGCGCC...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCTCTCAGAGTCCTTGGTaGCAGGGGCGCTCAATACCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLISQSPW*QGRSIP
Trigger: GGGTATTGAGCGCCCCTGCCACCAAGGACTCTGAGA...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCCGCTCTCAGAGTCCTTaGTGGCAGGGGCGCTCAATA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIRSQSP*WQGRSI
Trigger: TATTGAGCGCCCCTGCCACCAAGGACTCTGAGAGCG...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACTGTCCGAGGTGTGGCTaGGCGGTGCGCTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDCPRCG*AVRSQS
Trigger: ACTCTGAGAGCGCACCGCCCAGCCACACCTCGGACA...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCTTTCCTCTTGGATTTTaGCAAAGCCTTTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLFPLGF*QSLFCR
Trigger: CCTGCAGAAAAGGCTTTGCCAAAATCCAAGAGGAAA...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCTGCGGCCGTGACTTGTaGAGGGGAATGTTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETCGRDL*RGMFSE
Trigger: TTCTGAAAACATTCCCCTCCACAAGTCACGGCCGCA...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCCTTCTGGTGTGGCATTaGGGCCTGAGTGGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETLLVWH*GLSGFL
Trigger: TAAAAACCCACTCAGGCCCCAATGCCACACCAGAAG...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp GTTGGTTTCAGTTGTGTGCAGTTCCCTGACTGCACACAAGTCAGGGAACTAACTGTTTGTCTTCTGGTGTaGCATTGGGGCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VGFSCVQFPDCTQVRELTVCLLV*HWGLSG
Trigger: CCCACTCAGGCCCCAATGCCACACCAGAAGACAAAC...AGTTAGTTCCCTGACTTGTGTGCAGTCAGGGAACTGCACACAACTGAAACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CCTGCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAAACAGGGCGCTGGCGTTaGAGAGGCTGCCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: PAKDHCSMLRKCSPQSDKTGRWR*RGCPET
Trigger: GGTCTCAGGGCAGCCTCTCCAACGCCAGCGCCCTGT...TTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCCTGGTGGATGCGCTGTaGGATGCTGACGATGGTCGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLILVDAL*DADDGR
Trigger: TCGACCATCGTCAGCATCCCACAGCGCATCCACCAG...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGCCACAAGGACATTATTTGGTTGGCCGCCATCTaGTGGATGCGCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: SQTVLVQLYQVRGHKDIIWLAAI*WMRCGM
Trigger: CATCCCACAGCGCATCCACCAGATGGCGGCCAACCA...AATAATGTCCTTGTGGCCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACATTCTCGGTTTTCCTTaGCCAGGTTGTCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHILGFP*PGCRPS
Trigger: AGATGGCCGACAACCTGGCCAAGGAAAACCGAGAAT...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCAGTGCAGGCCCTGTTaGGAGTACTGGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCTSSSQKPLITLSSQCRPC*EYWTRC
Trigger: GCACCTGGTCCAGTACTCCCAACAGGGCCTGCACTG...GCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGACCAGAGCCCACTCTaGCCCCAGGGTGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIDQSPL*PQGEVP
Trigger: AGGGACCTCACCCTGGGGCCAGAGTGGGCTCTGGTC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTACGTTGAGCCATCTGTaGAGACCAGAGCCCACTCTG +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPTLSHL*RPEPTL
Trigger: CAGAGTGGGCTCTGGTCTCCACAGATGGCTCAACGT...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCAGACTTGAAACAGATTaGCTGACAAATGCCATGTGG +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLRLETD*LTNAMW
Trigger: CCACATGGCATTTGTCAGCCAATCTGTTTCAAGTCT...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCGTTTCTGACATAGGATaGGATTGTGAACTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLVSDIG*DCELCQ
Trigger: TTGGCAGAGTTCACAATCCCATCCTATGTCAGAAAC...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR CCA 90 bp TTTGAGGCTGCAGGGAGCCATGATCGCGCCACCGCATTCCAGCTTGGGCTACAGCATACTGATAATCTGTaGGAGCTACATTTAAGCCAT +
Preference number: 4 (lower is better)
Translates to: FEAAGSHDRATAFQLGLQHTDNL*ELHLSH
Trigger: ATGGCTTAAATGTAGCTCCCACAGATTATCAGTATG...CTGTAGCCCAAGCTGGAATGCGGTGGCGCGATCATGGCTCCCTGCAGCCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGGATTGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTCATGTCAAGCCACTaGTCTAATGCCTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: WIAPHITPPAFLRPSWCNFMSSH*SNASVF
Trigger: GAAGACGGAGGCATTAGACCAGTGGCTTGACATGAA...GTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCAATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGATTGAATCTAAGGACATaGGCTGGATCAGGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGLNLRT*AGSGEG
Trigger: CCCTTCACCTGATCCAGCCCATGTCCTTAGATTCAA...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp TGCACCACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATTGTCCCACCCATCTCTaGGATGAGGAGTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: CTTYYTACLSQTVLVQLYCPTHL*DEEFSM
Trigger: CATGGAGAACTCCTCATCCCAGAGATGGGTGGGACA...ATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGTGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR CCA 90 bp AGTCATGGGGAGTGGTCTTTGGGCTTTTCTCAAAGGAGTACACCGCACTGGATATGCACACAGACAAGTTaGCTGCCTTCTACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SHGEWSLGFSQRSTPHWICTQTS*LPSTSS
Trigger: GGAGCTGGTAGAAGGCAGCCAACTTGTCTGTGTGCA...TATCCAGTGCGGTGTACTCCTTTGAGAAAAGCCCAAAGACCACTCCCCATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGTTCATAGACACACAGTaGCTCGAGGTCCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRFIDTQ*LEVPFL
Trigger: CAGGAATGGGACCTCGAGTCACTGTGTGTCTATGAA...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTAGGGACTCCCCTGTATaGTGTGCAGTGCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVRDSPV*CAVHAG
Trigger: ACCAGCGTGCACTGCACATCATACAGGGGAGTCCCT...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR TCA 90 bp AAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCACAGATGAAACTTTGCCAGGTGCTTaGATAGCAGAAAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: KPHRNCCTNVLHTCSTDETLPGA*IAESGG
Trigger: TCCACCACTTTCTGCTATTCAAGCACCTGGCAAAGT...TTCATCTGTGGAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp ACATATTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAGGAGGTGGCCAGTCTTaGAGAGCTGTCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: TYYTACLSQTVLVQLYQVGGGQS*RAVFLS
Trigger: GGAGAGAAAGACAGCTCTTCAAGACTGGCCACCTCC...TACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAATATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCGGAGGTGGCCAGTCTTaGAGAGCTGTCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCTSSSQKPLIGGGQS*RAVFLS
Trigger: GGAGAGAAAGACAGCTCTTCAAGACTGGCCACCTCC...GATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGTGGCTCTACAGCCACCGAGTCACAGTGGCAGGAAGAAGAAATGCATGTGGCTTTGCTGGAAGAGGCTaGAGTAAACAAACTGTTGCC +
Preference number: 4 (lower is better)
Translates to: MWLYSHRVTVAGRRNACGFAGRG*SKQTVA
Trigger: GGCAACAGTTTGTTTACTTCAGCCTCTTCCAGCAAA...GCCACATGCATTTCTTCTTCCTGCCACTGTGACTCGGTGGCTGTAGAGCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CTAAGGAATTATGATGATCTTACTTCCCACCTACAGATCAGGCTAACAAAAATGGTGAGGTCTCCGCCGTaGGGCTGCAGCTGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: LRNYDDLTSHLQIRLTKMVRSPP*GCSWLS
Trigger: CGACAGCCAGCTGCAGCCTCACGGCGGAGACCTCAC...CATTTTTGTTAGCCTGATCTGTAGGTGGGAAGTAAGATCATCATAATTCCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGACACACAGGACACAGGAAGAGGCTCTGGTTGCTGCTGCCCCAGAAAGGAACGAGCTCTACTGTTTCTaGATACATCGTATAAGGAGA +
Preference number: 4 (lower is better)
Translates to: QTHRTQEEALVAAAPERNELYCF*IHRIRR
Trigger: TCTCCTTATACGATGTATTCAGAAACAGTAGAGCTC...GTTCCTTTCTGGGGCAGCAGCAACCAGAGCCTCTTCCTGTGTCCTGTGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp GTATTTGGTAACATGCAATCTAGTAAACTTCCGGCACAAAAATACCTGGCTTATTTGGAGAGGCTGCCCTaGGACCCCACGGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: VFGNMQSSKLPAQKYLAYLERLP*DPTELA
Trigger: CGCCAGCTCCGTGGGGTCTCAGGGCAGCCTCTCCAA...ATAAGCCAGGTATTTTTGTGCCGGAAGTTTACTAGATTGCATGTTACCAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCTGCGCTGTGGGATGCTaGCGATGGTCGACGGGGACA +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCCAVGC*RWSTGT
Trigger: TGTCCCCGTCGACCATCGTCAGCATCCCACAGCGCA...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTGCAGATCCAGGTCGTTaGAGAATTCTCGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTADPGR*RILGFP
Trigger: AGGAAAACCGAGAATTCTTCAACGACCTGGATCTGC...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCAAGGGTGAGGTCCCTATaGCAGGTGGGCGCTGTTCCG +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRARVRSL*QVGAVP
Trigger: CGGAACAGCGCCCACCTGTCATAGGGACCTCACCCT...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACTCTAGTCAGAAACCTCTaGTCACTTTGTCTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SVAQCPKTLSHLWRPEPTLVRNL*SLCLAW
Trigger: CCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAG...AGTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACCTAGTCAGAAACCTCTaGTCACTTTGTCTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHLVRNL*SLCLAW
Trigger: CCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAG...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp TTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCAGAGCCCACGTGCCGTCATCACCTTaGAAAAATGGATTGCACCAC +
Preference number: 4 (lower is better)
Translates to: FSSTVSKNVEPSVETRAHVPSSP*KNGLHH
Trigger: GTGGTGCAATCCATTTTTTCAAGGTGATGACGGCAC...GTGGGCTCTGGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CACCCATGCCAAACCCCACAGAAACTGCTGTACCAACGTGCTCCACACGTGCTCCATAGGATGGGATTGTaGACTCTGCCAAAAATTAGT +
Preference number: 4 (lower is better)
Translates to: HPCQTPQKLLYQRAPHVLHRMGL*TLPKIS
Trigger: ACTAATTTTTGGCAGAGTTCACAATCCCATCCTATG...GAGCACGTGTGGAGCACGTTGGTACAGCAGTTTCTGTGGGGTTTGGCATGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000671937.1
ENST00000672756.2
CDS-3UTR TCA 90 bp CGCAGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTCTGGAAAGGCAGGTaGTCAGCTCCGAATGAGGAT +
Preference number: 4 (lower is better)
Translates to: RSLINAVAGSFSSTVSKNVWKGR*SAPNED
Trigger: ATCCTCATTCGGAGCTGATCACCTGCCTTTCCAGAC...GTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409579.5
CDS-3UTR TCA 90 bp GCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTGAGCCATCTGTGGAGACCATGGGCTGGATCAGGTaGAGGGATGGTTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: AGSFSSTVSKNVEPSVETMGWIR*RDGFAF
Trigger: AAAAGCAAAACCATCCCTTCACCTGATCCAGCCCAT...GGTCTCCACAGATGGCTCAACGTTTTTGGACACTGTGCTACTGAAACTCCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp TTACACCGCCTGCCTTTCTCAGACCGTCCTGGTGCAACTTTATCAAGTAAGAGGAAGCTCAGTGGTTGGTaGAGCAAAGCCAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LHRLPFSDRPGATLSSKRKLSGW*SKAKFL
Trigger: CAGGAACTTGGCTTTGCTTCACCAACCACTGAGCTT...CCTCTTACTTGATAAAGTTGCACCAGGACGGTCTGAGAAAGGCAGGCGGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp CAGAGTGCTGATAAAACACTGCTGGCCCACCTGTCAAATGGGGCTTCACAGGGAAGAAGAGAACGTTCTTaGAAGACTGCTGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: QSADKTLLAHLSNGASQGRRERS*KTAGCF
Trigger: GAAACACCCAGCAGTCTTTCAAGAACGTTCTCTTCT...TCCCTGTGAAGCCCCATTTGACAGGTGGGCCAGCAGTGTTTTATCAGCACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409236.6
ENST00000672756.2
CDS-3UTR TCA 90 bp GAGACCACAGTTCTTCCTGCACAGAGGAAACCTTCCATTTCTCCACAACGTTTGTTGCTTGATCCTACTTaGCTCCAGGCCCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: ETTVLPAQRKPSISPQRLLLDPT*LQALPA
Trigger: AGCAGGAAGGGCCTGGAGTCAAGTAGGATCAAGCAA...CAAACGTTGTGGAGAAATGGAAGGTTTCCTCTGTGCAGGAAGAACTGTGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR TCA 90 bp GGGAACTGGCATGAGGAAGCAAGTTATTTCCACCATTCCGGCAGTGGGCTCCAGGTAAGATTGGAGGCTTaGTTCTCCCCCTTTCATAAA +
Preference number: 4 (lower is better)
Translates to: GNWHEEASYFHHSGSGLQVRLEA*FSPFHK
Trigger: TTTATGAAAGGGGGAGAATCAAGCCTCCAATCTTAC...CTGGAGCCCACTGCCGGAATGGTGGAAATAACTTGCTTCCTCATGCCAGTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTTGTCGACTTCAAACTTaGCGCCCGTCTCCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVCRLQT*RPSPVW
Trigger: CCAGACCGGAGACGGGCGGCAAGTTTGAAGTCGACA...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTCTGATCACTTTGGGCCCACCTCCACATTaGACACTTGTTTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCTSSSQKPLITLGPPPH*TLVWPE
Trigger: CTCGGGCCAAACAAGTGTGCAATGTGGAGGTGGGCC...CAAAGTGATCAGAGGTTTCTGACTAGAGGAAGTACACACACACACACACACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp ATGCATTTAGTTGATAATAGAGTCAGATGGGGGAAGGGAATTAGAGGAAGAGCACACAGTGTCCGCTGCTaGTGTGCTTGGCCGCCATGG +
Preference number: 4 (lower is better)
Translates to: MHLVDNRVRWGKGIRGRAHSVRC*CAWPPW
Trigger: CCATGGCGGCCAAGCACAGCAGCAGCGGACACTGTG...TGCTCTTCCTCTAATTCCCTTCCCCCATCTGACTCTATTATCAACTAAATGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GTGAGAGAATCAGCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATACGCGGTCGGTTTCTaGTGGACCAGGCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: VRESALSWQIALSLVSEGYAVGF*WTRLGF
Trigger: AAAACCCAGCCTGGTCCAGCAGAAACCGACCGCGTA...TCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGCTGATTCTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp AATAAGTATGCGCTTGCAAATTGTGAAGGATCAGATTCACGTGCCTCTGGCAGGCTCCCCTGTATGATGTaGAGTGCACGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: NKYALANCEGSDSRASGRLPCMM*SARWFP
Trigger: CGGAAACCAGCGTGCACTGCACATCATACAGGGGAG...CCTGCCAGAGGCACGTGAATCTGATCCTTCACAATTTGCAAGCGCATACTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672269.1
CDS-3UTR GCA 90 bp GCATTATCATGGCAAATAGCTCTCAGCCTGGTAAGCGAAGGATTCAGGCTCCTAAGCCGTTCTCTGAGCTaGCTGCTGTTCATTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ALSWQIALSLVSEGFRLLSRSLS*LLFILL
Trigger: GAGGAGAATGAACAGCAGGCAGCTCAGAGAACGGCT...TAGGAGCCTGAATCCTTCGCTTACCAGGCTGAGAGCTATTTGCCATGATAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp CAAGGCACGTCTTGTAGAAGAAGTGACGTAGCAGAGAACACAGGGTTTCAATGGAGCCGTTCTCTGAGCTaGCTGCTGTTCATTCTCCTC +
Preference number: 4 (lower is better)
Translates to: QGTSCRRSDVAENTGFQWSRSLS*LLFILL
Trigger: GAGGAGAATGAACAGCAGGCAGCTCAGAGAACGGCT...CCATTGAAACCCTGTGTTCTCTGCTACGTCACTTCTTCTACAAGACGTGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430789.1
CDS-3UTR GCA 90 bp AGTCTGATAAATGCTGTGGCTGGGAGTTTCAGTAGCACAGTGTCCAAAAACGTTAAGGCACCGAGGTTCTaGAGTTGGGCTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: SLINAVAGSFSSTVSKNVKAPRF*SWAAGP
Trigger: TGGTCCAGCAGCCCAACTGCAGAACCTCGGTGCCTT...AACGTTTTTGGACACTGTGCTACTGAAACTCCCAGCCACAGCATTTATCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAATGCTGCTGCTGCCCTTaGTGGAAGGCACCGAGGTTC +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKCCCCP*WKAPRF
Trigger: GAACCTCGGTGCCTTCCAGCAAGGGCAGCAGCAGCA...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp TCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAACTAGACCACTCTCGCTGGAGCTaGTCTCGGTCTCCGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SSQKPLITLSSLGLWKLDHSRWS*SRSPSQ
Trigger: CTGACTCGGAGACCGAGAGCAGCTCCAGCGAGAGTG...GTCTAGTTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000672756.2
CDS-3UTR GCA 90 bp ACTTCCTCTAGTCAGAAACCTCTGATCACTTTGTCTAGCCTGGGATTATGGAAAAGGAGCGCAGCTCCTTaGGGTGGCTCGCTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TSSSQKPLITLSSLGLWKRSAAP*GGSLCC
Trigger: ACAACAGAGCGAGCCACCGCAAGGAGCTGCGCTCCT...TTTCCATAATCCCAGGCTAGACAAAGTGATCAGAGGTTTCTGACTAGAGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp TTCCAAATGCTTGAAGGCCAAAGCCAAATGCAAATTCCACAAGCCCTTCTTATTGGTGTGGCTGGGCGGTaGGCTCTCAGAGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: FQMLEGQSQMQIPQALLIGVAGR*ALRVLG
Trigger: ACCAAGGACTCTGAGAGCGCACCGCCCAGCCACACC...AATAAGAAGGGCTTGTGGAATTTGCATTTGGCTTTGGCCTTCAAGCATTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000672756.2
CDS-3UTR GCA 90 bp GCAAAAGATCATTGTTCAATGCTGAGGAAATGTTCACCGCAGTCTGATAAATGCGGTGTGGCTGGGCGGTaGGCTCTCAGAGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: AKDHCSMLRKCSPQSDKCGVAGR*ALRVLG
Trigger: ACCAAGGACTCTGAGAGCGCACCGCCCAGCCACACC...GCATTTATCAGACTGCGGTGAACATTTCCTCAGCATTGAACAATGATCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2
ENST00000672756.2
CDS-3UTR GCA 90 bp ACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTTCCTCTAGTCAGAAACCTTGGCAAAGCCTTTTCTaGAGGTGTGTCCGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: TVCVCVCVCVCTSSSQKPWQSLF*RCVRGV
Trigger: CACACCTCGGACACACCTGCAGAAAAGGCTTTGCCA...AGGTTTCTGACTAGAGGAAGTACACACACACACACACACACACACACACACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317233.8
ENST00000409236.6
ENST00000409579.5
ENST00000445815.2