RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AFF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000172493

Ensembl transcript IDs: ENST00000307808.10, ENST00000395146.8, ENST00000395146.9, ENST00000503369.1, ENST00000503477.5, ENST00000504956.5, ENST00000507468.5, ENST00000511442.1, ENST00000511722.5, ENST00000511996.5, ENST00000514970.2, ENST00000544085.6, ENST00000674009.1

Found 767 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGCGCCAAGTCCTCCTGTGCAGACCTCGAGGTGGCACCCCATGTaGTGTGGCTCCTCCTCACCGCTCCGACGTGGGCTGACTTTCAGC +
Preference number: 1 (lower is better)
Translates to: AAPSPPVQTSRWHPM*CGSSSPLRRGLTFS
Trigger: GCTGAAAGTCAGCCCACGTCGGAGCGGTGAGGAGGAGCCACAGCACATGGGGTGCCACCTCGAGGTCTGCACAGGAGGACTTGGCGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR CCA 90 bp GCCAAGTCCTCCTGTGCAGACCTCGAGGTGGCACCCCATGTGCTGTaGCTCCTCCTCACCGCTCCGACGTGGGCTGACTTTCAGCACAGT +
Preference number: 1 (lower is better)
Translates to: AKSSCADLEVAPHVL*LLLTAPTWADFQHS
Trigger: ACTGTGCTGAAAGTCAGCCCACGTCGGAGCGGTGAGGAGGAGCCACAGCACATGGGGTGCCACCTCGAGGTCTGCACAGGAGGACTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR GCA 90 bp GTGGGAAATGGCAGGGGTAGGAAATGGCAGCGCCAAGTCCTCCTGTaGAGACCTCGAGGTGGCACCCCATGTGCTGTGGCTCCTCCTCAC +
Preference number: 1 (lower is better)
Translates to: VGNGRGRKWQRQVLL*RPRGGTPCAVAPPH
Trigger: GTGAGGAGGAGCCACAGCACATGGGGTGCCACCTCGAGGTCTGCACAGGAGGACTTGGCGCTGCCATTTCCTACCCCTGCCATTTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR CCA 90 bp GAGGTGGCACCCCATGTGCTGTGGCTCCTCCTCACCGCTCCGACGTaGGCTGACTTTCAGCACAGTAATGAGAAGTCAGAGCTGGGGTCA +
Preference number: 1 (lower is better)
Translates to: EVAPHVLWLLLTAPT*ADFQHSNEKSELGS
Trigger: TGACCCCAGCTCTGACTTCTCATTACTGTGCTGAAAGTCAGCCCACGTCGGAGCGGTGAGGAGGAGCCACAGCACATGGGGTGCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR CCA 90 bp AACAGTGACTGCCCTGTTAGAGAGTCCCTTTCGCTGAAGCAGGGGTaGGAAATGGCAGGGGTAGGAAATGGCAGCGCCAAGTCCTCCTGT +
Preference number: 1 (lower is better)
Translates to: NSDCPVRESLSLKQG*EMAGVGNGSAKSSC
Trigger: ACAGGAGGACTTGGCGCTGCCATTTCCTACCCCTGCCATTTCCCACCCCTGCTTCAGCGAAAGGGACTCTCTAACAGGGCAGTCACTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR TCA 90 bp GGAGAAGAAACTGAAGGAACAGCCTCACACAGACCACTCACACTGTaGGAGATAAGCATCGCTCCCATCCCTCGACACATCCCTTTGTGT +
Preference number: 1 (lower is better)
Translates to: GEETEGTASHRPLTL*EISIAPIPRHIPLC
Trigger: ACACAAAGGGATGTGTCGAGGGATGGGAGCGATGCTTATCTCTCACAGTGTGAGTGGTCTGTGTGAGGCTGTTCCTTCAGTTTCTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR GCA 90 bp CCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAACAGTGACTaGCCTGTTAGAGAGTCCCTTTCGCTGAAGCAGGGGTGGGAAATG +
Preference number: 1 (lower is better)
Translates to: PSSPREEIQNRVNSD*PVRESLSLKQGWEM
Trigger: CATTTCCCACCCCTGCTTCAGCGAAAGGGACTCTCTAACAGGGCAGTCACTGTTGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR GCA 90 bp TCTTCAGTCAAGGGAGCACTGTGGCTTGCCAACAGAACACGCACATaGTCTGGCACAATCTGCATAGAACCTGCCATAAAGAACACAACC +
Preference number: 1 (lower is better)
Translates to: SSVKGALWLANRTRT*SGTICIEPAIKNTT
Trigger: GGTTGTGTTCTTTATGGCAGGTTCTATGCAGATTGTGCCAGAGCATGTGCGTGTTCTGTTGGCAAGCCACAGTGCTCCCTTGACTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR CCA 90 bp AGTCAAGGGAGCACTGTGGCTTGCCAACAGAACACGCACATGCTCTaGCACAATCTGCATAGAACCTGCCATAAAGAACACAACCCTTCA +
Preference number: 1 (lower is better)
Translates to: SQGSTVACQQNTHML*HNLHRTCHKEHNPS
Trigger: TGAAGGGTTGTGTTCTTTATGGCAGGTTCTATGCAGATTGTGCCAGAGCATGTGCGTGTTCTGTTGGCAAGCCACAGTGCTCCCTTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR GCA 90 bp AGAAATCTACCTGGAAATGTCTTCAGTCAAGGGAGCACTGTGGCTTaGCAACAGAACACGCACATGCTCTGGCACAATCTGCATAGAACC +
Preference number: 1 (lower is better)
Translates to: RNLPGNVFSQGSTVA*QQNTHMLWHNLHRT
Trigger: GGTTCTATGCAGATTGTGCCAGAGCATGTGCGTGTTCTGTTGGCAAGCCACAGTGCTCCCTTGACTGAAGACATTTCCAGGTAGATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR GCA 90 bp TGCCAACAGAACACGCACATGCTCTGGCACAATCTGCATAGAACCTaGCATAAAGAACACAACCCTTCACAATTGACAGGTGGCTTGTTC +
Preference number: 1 (lower is better)
Translates to: CQQNTHMLWHNLHRT*HKEHNPSQLTGGLF
Trigger: GAACAAGCCACCTGTCAATTGTGAAGGGTTGTGTTCTTTATGGCAGGTTCTATGCAGATTGTGCCAGAGCATGTGCGTGTTCTGTTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR GCA 90 bp CAGTCAAATTCTCCTCCTATTGTGATTCTATTTCTGATAAATGCTTaGTGGGCCCTCCCACTCCTCACCACTGCTACTAGGTGGCCAATG +
Preference number: 1 (lower is better)
Translates to: QSNSPPIVILFLINA*WALPLLTTATRWPM
Trigger: CATTGGCCACCTAGTAGCAGTGGTGAGGAGTGGGAGGGCCCAGCAAGCATTTATCAGAAATAGAATCACAATAGGAGGAGAATTTGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR TCA 90 bp ACTTACGGAGGGCCACAGTTCCTCCTCAACCAAATCAAATCTAGCTaGGAACACTCTGGAGTGAAGGCATGTGGTGATGAGTTTTTCAAA +
Preference number: 1 (lower is better)
Translates to: TYGGPQFLLNQIKSS*EHSGVKACGDEFFK
Trigger: TTTGAAAAACTCATCACCACATGCCTTCACTCCAGAGTGTTCTCAGCTAGATTTGATTTGGTTGAGGAGGAACTGTGGCCCTCCGTAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR CCA 90 bp TCAAATTCTCCTCCTATTGTGATTCTATTTCTGATAAATGCTTGCTaGGCCCTCCCACTCCTCACCACTGCTACTAGGTGGCCAATGTTT +
Preference number: 1 (lower is better)
Translates to: SNSPPIVILFLINAC*ALPLLTTATRWPMF
Trigger: AAACATTGGCCACCTAGTAGCAGTGGTGAGGAGTGGGAGGGCCCAGCAAGCATTTATCAGAAATAGAATCACAATAGGAGGAGAATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR TCA 90 bp AAACCGGTCATCAGGAATCACACATCAAGGTCTTATGCTCAGATATaGCTACAGCTGTCATTCTCTGGCTTTCACCTAAACATGAGGGAC +
Preference number: 1 (lower is better)
Translates to: KPVIRNHTSRSYAQI*LQLSFSGFHLNMRD
Trigger: GTCCCTCATGTTTAGGTGAAAGCCAGAGAATGACAGCTGTAGTCATATCTGAGCATAAGACCTTGATGTGTGATTCCTGATGACCGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR GCA 90 bp ATAAATATGGTTCTCCCTCCTCCACTAATAGGAAAATGTGAAACATaGTTGGTAGGAAACATGTACAGGGGCAGAATGGGACAAAGGCGG +
Preference number: 1 (lower is better)
Translates to: INMVLPPPLIGKCET*LVGNMYRGRMGQRR
Trigger: CCGCCTTTGTCCCATTCTGCCCCTGTACATGTTTCCTACCAAGCATGTTTCACATTTTCCTATTAGTGGAGGAGGGAGAACCATATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR CCA 90 bp AAGAAGCAGATTTCATGTTTCTTGTTCACTGACGAAACTCTGAGTTaGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCA +
Preference number: 1 (lower is better)
Translates to: KKQISCFLFTDETLS*LDNMSYHITVDHRS
Trigger: TGATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACATGAAATCTGCTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR TCA 90 bp AAAATTTCCTTCTGGGAATGGACTAGCGTGGCTACTGAGATGACGTaGAATTCACTTTCAGAGTTGAAACTGTTTCTCCTCATTTCATTT +
Preference number: 1 (lower is better)
Translates to: KISFWEWTSVATEMT*NSLSELKLFLLISF
Trigger: AAATGAAATGAGGAGAAACAGTTTCAACTCTGAAAGTGAATTTCACGTCATCTCAGTAGCCACGCTAGTCCATTCCCAGAAGGAAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR TCA 90 bp ATTATAAATAAATATGGTTCTCCCTCCTCCACTAATAGGAAAATGTaGAACATGCTTGGTAGGAAACATGTACAGGGGCAGAATGGGACA +
Preference number: 1 (lower is better)
Translates to: IINKYGSPSSTNRKM*NMLGRKHVQGQNGT
Trigger: TGTCCCATTCTGCCCCTGTACATGTTTCCTACCAAGCATGTTTCACATTTTCCTATTAGTGGAGGAGGGAGAACCATATTTATTTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR TCA 90 bp ATCCTTCAGACCTCTATATACAACCGTAACAGCAAAAAGACCCTATaGACGTTAAGGATTCATCAGCCACTACCTTTCACATACTCTATT +
Preference number: 1 (lower is better)
Translates to: ILQTSIYNRNSKKTL*TLRIHQPLPFTYSI
Trigger: AATAGAGTATGTGAAAGGTAGTGGCTGATGAATCCTTAACGTTCATAGGGTCTTTTTGCTGTTACGGTTGTATATAGAGGTCTGAAGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGCGCCAAGTCCTCCTGTaGAGACCTCGAGGTGGCACC +
Preference number: 2 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRRQVLL*RPRGGT
Trigger: GGTGCCACCTCGAGGTCTGCACAGGAGGACTTGGCG...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGTGCAGACCTCGAGGTaGCACCCCATGTGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRVQTSR*HPMCCG
Trigger: GCCACAGCACATGGGGTGCCACCTCGAGGTCTGCAC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGCACCCCATGTGCTGTaGCTCCTCCTCACCGCTCCG +
Preference number: 2 (lower is better)
Translates to: NSELAGQHELPHNCRPQIAPHVL*LLLTAP
Trigger: CGGAGCGGTGAGGAGGAGCCACAGCACATGGGGTGC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGGCAGGGGTAGGAAATaGCAGCGCCAAGTCCTCCTG +
Preference number: 2 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRGRGRK*QRQVLL
Trigger: CAGGAGGACTTGGCGCTGCCATTTCCTACCCCTGCC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR TCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGAGAGTCCCTTTCGCTaGAGCAGGGGTGGGAAATGG +
Preference number: 2 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRESPFR*SRGGKW
Trigger: CCATTTCCCACCCCTGCTTCAGCGAAAGGGACTCTC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCAGGTGGCACCCCATGTaGTGTGGCTCCTCCTCACCG +
Preference number: 2 (lower is better)
Translates to: NSELAGQHELPHNCRPQIRWHPM*CGSSSP
Trigger: CGGTGAGGAGGAGCCACAGCACATGGGGTGCCACCT...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCCGCCAAGTCCTCCTGTaGAGACCTCGAGGTGGCACC +
Preference number: 2 (lower is better)
Translates to: NSELAGQHELPHNCRPQIRQVLL*RPRGGT
Trigger: GGTGCCACCTCGAGGTCTGCACAGGAGGACTTGGCG...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTAGGCAATGGGGAGATTaGGGGCGGCAGGAGCGGGGG +
Preference number: 2 (lower is better)
Translates to: DKGDKCGPICVREIATYFRQWGD*GRQERG
Trigger: CCCCCGCTCCTGCCGCCCCCAATCTCCCCATTGCCT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGTGCAGACCTCGAGGTaGCACCCCATGTGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: NSELAGQHELPHNCRPQIVQTSR*HPMCCG
Trigger: GCCACAGCACATGGGGTGCCACCTCGAGGTCTGCAC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGTCGCTGAAGCAGGGGTaGGAAATGGCAGGGGTAGGA +
Preference number: 2 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRSLKQG*EMAGVG
Trigger: TCCTACCCCTGCCATTTCCCACCCCTGCTTCAGCGA...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAAGGTGGCACCCCATGTaGTGTGGCTCCTCCTCACCG +
Preference number: 2 (lower is better)
Translates to: GINVGSLLPQGRKFRIESRWHPM*CGSSSP
Trigger: CGGTGAGGAGGAGCCACAGCACATGGGGTGCCACCT...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCACGCCAAGTCCTCCTGTaGAGACCTCGAGGTGGCACC +
Preference number: 2 (lower is better)
Translates to: GINVGSLLPQGRKFRIESRQVLL*RPRGGT
Trigger: GGTGCCACCTCGAGGTCTGCACAGGAGGACTTGGCG...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGCACCCCATGTGCTGTaGCTCCTCCTCACCGCTCCG +
Preference number: 2 (lower is better)
Translates to: DKGDKCGPICVREIATYFAPHVL*LLLTAP
Trigger: CGGAGCGGTGAGGAGGAGCCACAGCACATGGGGTGC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR TCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGAGAGTCCCTTTCGCTaGAGCAGGGGTGGGAAATGG +
Preference number: 2 (lower is better)
Translates to: NSELAGQHELPHNCRPQIESPFR*SRGGKW
Trigger: CCATTTCCCACCCCTGCTTCAGCGAAAGGGACTCTC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGAGCTGGGGTCAATGTaGAGCGCTCTAGGCAATGGG +
Preference number: 2 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHELGSM*SALGNG
Trigger: CCCATTGCCTAGAGCGCTGCACATTGACCCCAGCTC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAAGGTGGCACCCCATGTaGTGTGGCTCCTCCTCACCG +
Preference number: 2 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTRWHPM*CGSSSP
Trigger: CGGTGAGGAGGAGCCACAGCACATGGGGTGCCACCT...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAAGGCAATGGGGAGATTaGGGGCGGCAGGAGCGGGGG +
Preference number: 2 (lower is better)
Translates to: YNLALSNDLPQYRFCLWERQWGD*GRQERG
Trigger: CCCCCGCTCCTGCCGCCCCCAATCTCCCCATTGCCT...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTCAGCGCTCTAGGCAATaGGGAGATTGGGGGCGGCAG +
Preference number: 2 (lower is better)
Translates to: DKGDKCGPICVREIATYFQRSRQ*GDWGRQ
Trigger: CTGCCGCCCCCAATCTCCCCATTGCCTAGAGCGCTG...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGATGAGAAGTCAGAGCTaGGGTCAATGTGCAGCGCTC +
Preference number: 2 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRMRSQS*GQCAAL
Trigger: GAGCGCTGCACATTGACCCCAGCTCTGACTTCTCAT...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGGCAGGGGTAGGAAATaGCAGCGCCAAGTCCTCCTG +
Preference number: 2 (lower is better)
Translates to: GINVGSLLPQGRKFRIESGRGRK*QRQVLL
Trigger: CAGGAGGACTTGGCGCTGCCATTTCCTACCCCTGCC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACTCGCTGAAGCAGGGGTaGGAAATGGCAGGGGTAGGA +
Preference number: 2 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHSLKQG*EMAGVG
Trigger: TCCTACCCCTGCCATTTCCCACCCCTGCTTCAGCGA...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGCAAGCCACTGTTCATTaGCAGAAAGTGGGGCACAGT +
Preference number: 2 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRQATVH*QKVGHS
Trigger: ACTGTGCCCCACTTTCTGCCAATGAACAGTGGCTTG...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCACTCACCGCTCCGACGTaGGCTGACTTTCAGCACAGT +
Preference number: 2 (lower is better)
Translates to: GINVGSLLPQGRKFRIESLTAPT*ADFQHS
Trigger: ACTGTGCTGAAAGTCAGCCCACGTCGGAGCGGTGAG...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGAGCTGGGGTCAATGTaGAGCGCTCTAGGCAATGGG +
Preference number: 2 (lower is better)
Translates to: DKGDKCGPICVREIATYFELGSM*SALGNG
Trigger: CCCATTGCCTAGAGCGCTGCACATTGACCCCAGCTC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGAGCTGGGGTCAATGTaGAGCGCTCTAGGCAATGGG +
Preference number: 2 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTELGSM*SALGNG
Trigger: CCCATTGCCTAGAGCGCTGCACATTGACCCCAGCTC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGATTTCCTTCTGGGAATaGACTAGCGTGGCTACTGAG +
Preference number: 2 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRISFWE*TSVATE
Trigger: CTCAGTAGCCACGCTAGTCCATTCCCAGAAGGAAAT...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGTGCAGACCTCGAGGTaGCACCCCATGTGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEVQTSR*HPMCCG
Trigger: GCCACAGCACATGGGGTGCCACCTCGAGGTCTGCAC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCCAGCCTCCTCATCTCTaGTTCTGCATAACCACAGTG +
Preference number: 2 (lower is better)
Translates to: NSELAGQHELPHNCRPQIQPPHL*FCITTV
Trigger: CACTGTGGTTATGCAGAAGCAGAGATGAGGAGGCTG...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCAGTGGACAAATGTCCTaGCCATCTCGTGGTGCTTCT +
Preference number: 2 (lower is better)
Translates to: NSELAGQHELPHNCRPQISGQMS*PSRGAS
Trigger: AGAAGCACCACGAGATGGCCAGGACATTTGTCCACT...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACCAAGCCACTGTTCATTaGCAGAAAGTGGGGCACAGT +
Preference number: 2 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHQATVH*QKVGHS
Trigger: ACTGTGCCCCACTTTCTGCCAATGAACAGTGGCTTG...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAATGAGAAGTCAGAGCTaGGGTCAATGTGCAGCGCTC +
Preference number: 2 (lower is better)
Translates to: GINVGSLLPQGRKFRIESMRSQS*GQCAAL
Trigger: GAGCGCTGCACATTGACCCCAGCTCTGACTTCTCAT...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR CAA 90 bp AATATGGTTCTCCCTCCTCCACTAATAGGAAAATGTGAAACATGCTaGGTAGGAAACATGTACAGGGGCAGAATGGGACAAAGGCGGAGA +
Preference number: 2 (lower is better)
Translates to: NMVLPPPLIGKCETC*VGNMYRGRMGQRRR
Trigger: TCTCCGCCTTTGTCCCATTCTGCCCCTGTACATGTTTCCTACCAAGCATGTTTCACATTTTCCTATTAGTGGAGGAGGGAGAACCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR TCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGCGTGGCTACTGAGATaGCGTGAAATTCACTTTCAG +
Preference number: 2 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHAWLLR*REIHFQ
Trigger: CTGAAAGTGAATTTCACGTCATCTCAGTAGCCACGC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR TCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAAGACCACTCACACTGTaGGAGATAAGCATCGCTCCC +
Preference number: 2 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTRPLTL*EISIAP
Trigger: GGGAGCGATGCTTATCTCTCACAGTGTGAGTGGTCT...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAATGAGAAGTCAGAGCTaGGGTCAATGTGCAGCGCTC +
Preference number: 2 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTMRSQS*GQCAAL
Trigger: GAGCGCTGCACATTGACCCCAGCTCTGACTTCTCAT...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR TCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGAGGGACCAGACCTCTaGCTTAGTGACAACCAAAGA +
Preference number: 2 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTEGPDL*LSDNQR
Trigger: TCTTTGGTTGTCACTAAGTCAGAGGTCTGGTCCCTC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTTTCTGATAAATGCTTaGTGGGCCCTCCCACTCCTC +
Preference number: 2 (lower is better)
Translates to: DKGDKCGPICVREIATYFFLINA*WALPLL
Trigger: GAGGAGTGGGAGGGCCCAGCAAGCATTTATCAGAAA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGGGCAAGATCATCTCTaGGGCCAGCCTCCTCATCTC +
Preference number: 2 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQGQDHL*GQPPHL
Trigger: GAGATGAGGAGGCTGGCCCCAGAGATGATCTTGCCC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGAAAGTGGGGCACAGTaGAGTCCTTCATTACTTATG +
Preference number: 2 (lower is better)
Translates to: NSELAGQHELPHNCRPQIESGAQ*SPSLLM
Trigger: CATAAGTAATGAAGGACTCCACTGTGCCCCACTTTC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGAAAGTGGGGCACAGTaGAGTCCTTCATTACTTATG +
Preference number: 2 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHESGAQ*SPSLLM
Trigger: CATAAGTAATGAAGGACTCCACTGTGCCCCACTTTC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR TCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGCTACTGAGATGACGTaGAATTCACTTTCAGAGTTG +
Preference number: 2 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHATEMT*NSLSEL
Trigger: CAACTCTGAAAGTGAATTTCACGTCATCTCAGTAGC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR TCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGCTACTGAGATGACGTaGAATTCACTTTCAGAGTTG +
Preference number: 2 (lower is better)
Translates to: NSELAGQHELPHNCRPQIATEMT*NSLSEL
Trigger: CAACTCTGAAAGTGAATTTCACGTCATCTCAGTAGC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR TCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAACAACCCTTCACAATTaGCAGGTGGCTTGTTCTAGG +
Preference number: 2 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTTTLHN*QVACSR
Trigger: CCTAGAACAAGCCACCTGTCAATTGTGAAGGGTTGT...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTTGAGGCTTCCAATGTaGAAAAATAGTTCCCAAGGC +
Preference number: 2 (lower is better)
Translates to: NSELAGQHELPHNCRPQILRLPM*KNSSQG
Trigger: GCCTTGGGAACTATTTTTGCACATTGGAAGCCTCAA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGGCAGGAGCGGGGGTTaGCTTCAATTTTATAAATTA +
Preference number: 2 (lower is better)
Translates to: NSELAGQHELPHNCRPQIGRSGG*LQFYKL
Trigger: TAATTTATAAAATTGAAGGCAACCCCCGCTCCTGCC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAAGAGTCAACAGTGACTaGCCTGTTAGAGAGTCCCTT +
Preference number: 2 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTRVNSD*PVRESL
Trigger: AAGGGACTCTCTAACAGGGCAGTCACTGTTGACTCT...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTATTTCCTTCTGGGAATaGACTAGCGTGGCTACTGAG +
Preference number: 2 (lower is better)
Translates to: DKGDKCGPICVREIATYFISFWE*TSVATE
Trigger: CTCAGTAGCCACGCTAGTCCATTCCCAGAAGGAAAT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTGTACAGGGGCAGAATaGGACAAAGGCGGAGAAAAA +
Preference number: 2 (lower is better)
Translates to: DKGDKCGPICVREIATYFCTGAE*DKGGEK
Trigger: TTTTTCTCCGCCTTTGTCCCATTCTGCCCCTGTACA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR TCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGCTACTGAGATGACGTaGAATTCACTTTCAGAGTTG +
Preference number: 2 (lower is better)
Translates to: GINVGSLLPQGRKFRIESATEMT*NSLSEL
Trigger: CAACTCTGAAAGTGAATTTCACGTCATCTCAGTAGC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCATTGAGGCTTCCAATGTaGAAAAATAGTTCCCAAGGC +
Preference number: 2 (lower is better)
Translates to: GINVGSLLPQGRKFRIESLRLPM*KNSSQG
Trigger: GCCTTGGGAACTATTTTTGCACATTGGAAGCCTCAA...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACAGCCTCCTCATCTCTaGTTCTGCATAACCACAGTG +
Preference number: 2 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEQPPHL*FCITTV
Trigger: CACTGTGGTTATGCAGAAGCAGAGATGAGGAGGCTG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACTCTCCTCATTTCATTTaGAACTTGTATCCTGCTGGT +
Preference number: 2 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHSPHFI*NLYPAG
Trigger: ACCAGCAGGATACAAGTTGCAAATGAAATGAGGAGA...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTAACAGAACACGCACATaGTCTGGCACAATCTGCATA +
Preference number: 2 (lower is better)
Translates to: DKGDKCGPICVREIATYFNRTRT*SGTICI
Trigger: TATGCAGATTGTGCCAGAGCATGTGCGTGTTCTGTT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGATGAAACAAATGTCTaGACTGTTTTTGAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHDETNV*TVFEAS
Trigger: GGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAAGTGGACAAATGTCCTaGCCATCTCGTGGTGCTTCT +
Preference number: 2 (lower is better)
Translates to: YNLALSNDLPQYRFCLWESGQMS*PSRGAS
Trigger: AGAAGCACCACGAGATGGCCAGGACATTTGTCCACT...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGAAAGTGGGGCACAGTaGAGTCCTTCATTACTTATG +
Preference number: 2 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTESGAQ*SPSLLM
Trigger: CATAAGTAATGAAGGACTCCACTGTGCCCCACTTTC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAACCACTGCTACTAGGTaGCCAATGTTTTCACAATCC +
Preference number: 2 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTTTATR*PMFSQS
Trigger: GGATTGTGAAAACATTGGCCACCTAGTAGCAGTGGT...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR TCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTATGTTTCTTGTTCACTaGCGAAACTCTGAGTTGGCT +
Preference number: 2 (lower is better)
Translates to: DKGDKCGPICVREIATYFMFLVH*RNSELA
Trigger: AGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACAT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR TCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACACAAATCAAATCTAGCTaGGAACACTCTGGAGTGAAG +
Preference number: 2 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTQIKSS*EHSGVK
Trigger: CTTCACTCCAGAGTGTTCTCAGCTAGATTTGATTTG...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAACAGCCTCCTCATCTCTaGTTCTGCATAACCACAGTG +
Preference number: 2 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQQPPHL*FCITTV
Trigger: CACTGTGGTTATGCAGAAGCAGAGATGAGGAGGCTG...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGGCAGGAGCGGGGGTTaGCTTCAATTTTATAAATTA +
Preference number: 2 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTGRSGG*LQFYKL
Trigger: TAATTTATAAAATTGAAGGCAACCCCCGCTCCTGCC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR TCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGCGTGGCTACTGAGATaGCGTGAAATTCACTTTCAG +
Preference number: 2 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQAWLLR*REIHFQ
Trigger: CTGAAAGTGAATTTCACGTCATCTCAGTAGCCACGC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR TCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTCTTATGCTCAGATATaGCTACAGCTGTCATTCTCT +
Preference number: 2 (lower is better)
Translates to: DKGDKCGPICVREIATYFSYAQI*LQLSFS
Trigger: AGAGAATGACAGCTGTAGTCATATCTGAGCATAAGA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR TCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTCTAGCCCTTTCAAATaGTCTACCTCAGTACAGATT +
Preference number: 2 (lower is better)
Translates to: DKGDKCGPICVREIATYFSSPFK*STSVQI
Trigger: AATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTCTCCTCATTTCATTTaGAACTTGTATCCTGCTGGT +
Preference number: 2 (lower is better)
Translates to: DKGDKCGPICVREIATYFSPHFI*NLYPAG
Trigger: ACCAGCAGGATACAAGTTGCAAATGAAATGAGGAGA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGATGAAACAAATGTCTaGACTGTTTTTGAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTDETNV*TVFEAS
Trigger: GGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTAGCACTTTAGCCATCTaGTCAGGTATAAATGTTGGT +
Preference number: 2 (lower is better)
Translates to: DKGDKCGPICVREIATYFSTLAI*SGINVG
Trigger: ACCAACATTTATACCTGACCAGATGGCTAAAGTGCT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGACGAAACTCTGAGTTaGCTGGACAACATGAGTTAC +
Preference number: 2 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEDETLS*LDNMSY
Trigger: GTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACATTCACAATTGACAGGTaGCTTGTTCTAGGGAATGAT +
Preference number: 2 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTFTIDR*LVLGND
Trigger: ATCATTCCCTAGAACAAGCCACCTGTCAATTGTGAA...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR TCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGACAATCAAGGACTCTaGAAGTCTAGTTTTGCTATA +
Preference number: 2 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTDNQGL*KSSFAI
Trigger: TATAGCAAAACTAGACTTTCAGAGTCCTTGATTGTC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR TCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGGCACATGGGATTTCTaGTTGTGTTACTTCATTTTA +
Preference number: 2 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTGTWDF*LCYFIL
Trigger: TAAAATGAAGTAACACAATCAGAAATCCCATGTGCC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR TCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATATCGAAATAAAGCCTaGTTCTGGTGCCTTGTCCTT +
Preference number: 2 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEYRNKA*FWCLVL
Trigger: AAGGACAAGGCACCAGAATCAGGCTTTATTTCGATA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACACTCCTTAAGATGCTTTaGATTTGTCTTACTCTGAAG +
Preference number: 2 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTLLKML*ICLTLK
Trigger: CTTCAGAGTAAGACAAATGCAAAGCATCTTAAGGAG...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTAAAAATCTGTGCTTATaGGCACATGGGATTTCTGAT +
Preference number: 2 (lower is better)
Translates to: DKGDKCGPICVREIATYFKNLCL*AHGISD
Trigger: ATCAGAAATCCCATGTGCCCATAAGCACAGATTTTT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR GCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATCTCCTCATTTCATTTaGAACTTGTATCCTGCTGGT +
Preference number: 2 (lower is better)
Translates to: YNLALSNDLPQYRFCLWESPHFI*NLYPAG
Trigger: ACCAGCAGGATACAAGTTGCAAATGAAATGAGGAGA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR CAA 90 bp TTAAATAACATCTTCAATATCGAAATAAAGCCTGATTCTGGTGCCTaGTCCTTTACATATAACAGATGGACACACAATGCTACACACACA +
Preference number: 2 (lower is better)
Translates to: LNNIFNIEIKPDSGA*SFTYNRWTHNATHT
Trigger: TGTGTGTGTAGCATTGTGTGTCCATCTGTTATATGTAAAGGACAAGGCACCAGAATCAGGCTTTATTTCGATATTGAAGATGTTATTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR GCA 72 bp AGTCCTCCTGTGCAGACCTCGAGGTGGCACCCCATGTaGTGTGGCTCCTCCTCACCGCTCCGACGTGGGCTG +
Preference number: 3 (lower is better)
Translates to: SPPVQTSRWHPM*CGSSSPLRRGL
Trigger: CAGCCCACGTCGGAGCGGTGAGGAGGAGCCACAGCACATGGGGTGCCACCTCGAGGTCTGCACAGGAGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR CCA 72 bp ATGGCAGCGCCAAGTCCTCCTGTGCAGACCTCGAGGTaGCACCCCATGTGCTGTGGCTCCTCCTCACCGCTC +
Preference number: 3 (lower is better)
Translates to: MAAPSPPVQTSR*HPMCCGSSSPL
Trigger: GAGCGGTGAGGAGGAGCCACAGCACATGGGGTGCCACCTCGAGGTCTGCACAGGAGGACTTGGCGCTGCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR CCA 72 bp TCCTGTGCAGACCTCGAGGTGGCACCCCATGTGCTGTaGCTCCTCCTCACCGCTCCGACGTGGGCTGACTTT +
Preference number: 3 (lower is better)
Translates to: SCADLEVAPHVL*LLLTAPTWADF
Trigger: AAAGTCAGCCCACGTCGGAGCGGTGAGGAGGAGCCACAGCACATGGGGTGCCACCTCGAGGTCTGCACAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR CCA 72 bp CCCCATGTGCTGTGGCTCCTCCTCACCGCTCCGACGTaGGCTGACTTTCAGCACAGTAATGAGAAGTCAGAG +
Preference number: 3 (lower is better)
Translates to: PHVLWLLLTAPT*ADFQHSNEKSE
Trigger: CTCTGACTTCTCATTACTGTGCTGAAAGTCAGCCCACGTCGGAGCGGTGAGGAGGAGCCACAGCACATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR TCA 72 bp ACTGAAGGAACAGCCTCACACAGACCACTCACACTGTaGGAGATAAGCATCGCTCCCATCCCTCGACACATC +
Preference number: 3 (lower is better)
Translates to: TEGTASHRPLTL*EISIAPIPRHI
Trigger: GATGTGTCGAGGGATGGGAGCGATGCTTATCTCTCACAGTGTGAGTGGTCTGTGTGAGGCTGTTCCTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR GCA 72 bp CCTGGAAATGTCTTCAGTCAAGGGAGCACTGTGGCTTaGCAACAGAACACGCACATGCTCTGGCACAATCTG +
Preference number: 3 (lower is better)
Translates to: PGNVFSQGSTVA*QQNTHMLWHNL
Trigger: CAGATTGTGCCAGAGCATGTGCGTGTTCTGTTGGCAAGCCACAGTGCTCCCTTGACTGAAGACATTTCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR GCA 72 bp CCAAGGGAGGAAATTCAGAATAGAGTCAACAGTGACTaGCCTGTTAGAGAGTCCCTTTCGCTGAAGCAGGGG +
Preference number: 3 (lower is better)
Translates to: PREEIQNRVNSD*PVRESLSLKQG
Trigger: CCCCTGCTTCAGCGAAAGGGACTCTCTAACAGGGCAGTCACTGTTGACTCTATTCTGAATTTCCTCCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR TCA 72 bp GGGCCACAGTTCCTCCTCAACCAAATCAAATCTAGCTaGGAACACTCTGGAGTGAAGGCATGTGGTGATGAG +
Preference number: 3 (lower is better)
Translates to: GPQFLLNQIKSS*EHSGVKACGDE
Trigger: CTCATCACCACATGCCTTCACTCCAGAGTGTTCTCAGCTAGATTTGATTTGGTTGAGGAGGAACTGTGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR CCA 72 bp AGCACTGTGGCTTGCCAACAGAACACGCACATGCTCTaGCACAATCTGCATAGAACCTGCCATAAAGAACAC +
Preference number: 3 (lower is better)
Translates to: STVACQQNTHML*HNLHRTCHKEH
Trigger: GTGTTCTTTATGGCAGGTTCTATGCAGATTGTGCCAGAGCATGTGCGTGTTCTGTTGGCAAGCCACAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR CCA 72 bp CCTCCTATTGTGATTCTATTTCTGATAAATGCTTGCTaGGCCCTCCCACTCCTCACCACTGCTACTAGGTGG +
Preference number: 3 (lower is better)
Translates to: PPIVILFLINAC*ALPLLTTATRW
Trigger: CCACCTAGTAGCAGTGGTGAGGAGTGGGAGGGCCCAGCAAGCATTTATCAGAAATAGAATCACAATAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR GCA 72 bp TCTCCTCCTATTGTGATTCTATTTCTGATAAATGCTTaGTGGGCCCTCCCACTCCTCACCACTGCTACTAGG +
Preference number: 3 (lower is better)
Translates to: SPPIVILFLINA*WALPLLTTATR
Trigger: CCTAGTAGCAGTGGTGAGGAGTGGGAGGGCCCAGCAAGCATTTATCAGAAATAGAATCACAATAGGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CAA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTCAAGCCACTGTTCATaGGCAGAAAGTGGGGCACAG +
Preference number: 3 (lower is better)
Translates to: NSELAGQHELPHNCRPQISSHCS*AESGAQ
Trigger: CTGTGCCCCACTTTCTGCCAATGAACAGTGGCTTGA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CAA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTAGGGAGCACTGTGGCTaGCCAACAGAACACGCACAT +
Preference number: 3 (lower is better)
Translates to: DKGDKCGPICVREIATYFREHCG*PTEHAH
Trigger: ATGTGCGTGTTCTGTTGGCAAGCCACAGTGCTCCCT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CAA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAATAGTTCCCAAGGCATaGAATCAACCTGGGGCTCCA +
Preference number: 3 (lower is better)
Translates to: GINVGSLLPQGRKFRIESIVPKA*NQPGAP
Trigger: TGGAGCCCCAGGTTGATTCAATGCCTTGGGAACTAT...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CAA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTCAAGCCACTGTTCATaGGCAGAAAGTGGGGCACAG +
Preference number: 3 (lower is better)
Translates to: DKGDKCGPICVREIATYFSSHCS*AESGAQ
Trigger: CTGTGCCCCACTTTCTGCCAATGAACAGTGGCTTGA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR GCA 72 bp AACACGCACATGCTCTGGCACAATCTGCATAGAACCTaGCATAAAGAACACAACCCTTCACAATTGACAGGT +
Preference number: 3 (lower is better)
Translates to: NTHMLWHNLHRT*HKEHNPSQLTG
Trigger: ACCTGTCAATTGTGAAGGGTTGTGTTCTTTATGGCAGGTTCTATGCAGATTGTGCCAGAGCATGTGCGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR TCA 72 bp TTCTGGGAATGGACTAGCGTGGCTACTGAGATGACGTaGAATTCACTTTCAGAGTTGAAACTGTTTCTCCTC +
Preference number: 3 (lower is better)
Translates to: FWEWTSVATEMT*NSLSELKLFLL
Trigger: GAGGAGAAACAGTTTCAACTCTGAAAGTGAATTTCACGTCATCTCAGTAGCCACGCTAGTCCATTCCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CAA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACTTCTCCTCATTTCATTaGCAACTTGTATCCTGCTGG +
Preference number: 3 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHFSSFH*QLVSCW
Trigger: CCAGCAGGATACAAGTTGCAAATGAAATGAGGAGAA...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CAA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAATAGTTCCCAAGGCATaGAATCAACCTGGGGCTCCA +
Preference number: 3 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEIVPKA*NQPGAP
Trigger: TGGAGCCCCAGGTTGATTCAATGCCTTGGGAACTAT...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CAA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAATGTCTGGACTGTTTTaGAGGCTTCCAATGTGCAAA +
Preference number: 3 (lower is better)
Translates to: GINVGSLLPQGRKFRIESMSGLF*RLPMCK
Trigger: TTTGCACATTGGAAGCCTCAAAAACAGTCCAGACAT...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CAA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTATGTCTGGACTGTTTTaGAGGCTTCCAATGTGCAAA +
Preference number: 3 (lower is better)
Translates to: DKGDKCGPICVREIATYFMSGLF*RLPMCK
Trigger: TTTGCACATTGGAAGCCTCAAAAACAGTCCAGACAT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CAA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTCCTGATTCTGGTGCCTaGTCCTTTACATATAACAGA +
Preference number: 3 (lower is better)
Translates to: DKGDKCGPICVREIATYFPDSGA*SFTYNR
Trigger: TCTGTTATATGTAAAGGACAAGGCACCAGAATCAGG...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CAA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAAAATGTGAAACATGCTaGGTAGGAAACATGTACAGG +
Preference number: 3 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTKCETC*VGNMYR
Trigger: CCTGTACATGTTTCCTACCAAGCATGTTTCACATTT...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR TCA 72 bp ACCTCTATATACAACCGTAACAGCAAAAAGACCCTATaGACGTTAAGGATTCATCAGCCACTACCTTTCACA +
Preference number: 3 (lower is better)
Translates to: TSIYNRNSKKTL*TLRIHQPLPFT
Trigger: TGTGAAAGGTAGTGGCTGATGAATCCTTAACGTTCATAGGGTCTTTTTGCTGTTACGGTTGTATATAGAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR CCA 72 bp ATTTCATGTTTCTTGTTCACTGACGAAACTCTGAGTTaGCTGGACAACATGAGTTACCACATAACTGTAGAC +
Preference number: 3 (lower is better)
Translates to: ISCFLFTDETLS*LDNMSYHITVD
Trigger: GTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACATGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CAA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACCTCGACACATCCCTTaGTGTATTTACAAACTACCA +
Preference number: 3 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEPRHIP*CIYKLP
Trigger: TGGTAGTTTGTAAATACACAAAGGGATGTGTCGAGG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
3UTR-3UTR CAA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACCTGATTCTGGTGCCTaGTCCTTTACATATAACAGA +
Preference number: 3 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEPDSGA*SFTYNR
Trigger: TCTGTTATATGTAAAGGACAAGGCACCAGAATCAGG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGCCTGGGGCCCTCTGGTaGCGCAGCTGGCTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRPGALW*RSWLAD
Trigger: GTCAGCCAGCCAGCTGCGCCACCAGAGGGCCCCAGG...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGCTCTGGGTGCCGCCGTaGGGGCTCTGTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRLWVPP*GLCAPG
Trigger: CCCAGGAGCACAGAGCCCCCACGGCGGCACCCAGAG...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGCCGGCGCCCAACGCCTaGCCAGCAACAGCACAACGC +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRPAPNA*PATAQR
Trigger: GCGTTGTGCTGTTGCTGGGCAGGCGTTGGGCGCCGG...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGCTTGGGTTCGTTGCTTaGTGCGGCCCGGGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRLGFVA*CGPGPS
Trigger: GGACGGCCCCGGGCCGCAGCAAGCAACGAACCCAAG...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGGGGTCTTCCGTCCATaGGCGCCTTCACCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHGVFRP*APSPRG
Trigger: CCCGCGGGGTGAAGGCGCTCATGGACGGAAGACCCC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGAGCCGAACCCCTCCTaGCCAAGGCGATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGREPNPS*PRRSWV
Trigger: GACCCAGGATCGCCTTGGTCAGGAGGGGTTCGGCTC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGTGGACATCCGGGCACTaGGGCCTCTGCGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRWTSGH*GLCGDL
Trigger: CAGATCGCCGCAGAGGCCCCAGTGCCCGGATGTCCA...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGGGGCTCTGTGCTCCTaGGGCCCTCTGGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIGALCS*GPLVAQ
Trigger: CTGCGCCACCAGAGGGCCCCAGGAGCACAGAGCCCC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGCTGCCACTGTGGGGTaGGCCCTGGCTCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRAATVG*ALALSQ
Trigger: CTGACTGAGAGCCAGGGCCCACCCCACAGTGGCAGC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGGAGGTGGAAATGTCTaGGAAGGCGGCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRGGGNV*EGGWAG
Trigger: CCCTGCCCAGCCGCCTTCTCAGACATTTCCACCTCC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACCGATCCTGGGTCAGGTaGTGGCTGTCCGGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHRSWVR*WLSGGP
Trigger: CGGCCCACCGGACAGCCAGCACCTGACCCAGGATCG...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACCTTGGGTTCGTTGCTTaGTGCGGCCCGGGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHLGFVA*CGPGPS
Trigger: GGACGGCCCCGGGCCGCAGCAAGCAACGAACCCAAG...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTCGGCCGAGCCCCGCCTaGGGGCTCCTCGAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFRPSPA*GLLESA
Trigger: AGCACTCTCGAGGAGCCCGCAGGCGGGGCTCGGCCG...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGGTGGCGCAGCTGGCTaGCTGACTTTGGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRGGAAG*LTLVSQ
Trigger: CTGGCTGACCAAAGTCAGCCAGCCAGCTGCGCCACC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGCTGTGGGGTGGGCCCTaGCTCTCAGTCAGGGGAACA +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRLWGGP*LSVRGT
Trigger: TGTTCCCCTGACTGAGAGCCAGGGCCCACCCCACAG...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGGGACCCTACGGAGCTaGCAGGAGAAGGCATTGGGG +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRGTLRS*QEKALG
Trigger: CCCCAATGCCTTCTCCTGCCAGCTCCGTAGGGTCCC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCAGGCAATGGGGAGATTaGGGGCGGCAGGAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIRQWGD*GRQERG
Trigger: CCCCCGCTCCTGCCGCCCCCAATCTCCCCATTGCCT...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGGGGTCTTCCGTCCATaGGCGCCTTCACCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFGVFRP*APSPRG
Trigger: CCCGCGGGGTGAAGGCGCTCATGGACGGAAGACCCC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGCGCAGCTGGCTGGCTaGCTTTGGTCAGCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRAQLAG*LWSASC
Trigger: ACAACTGGCTGACCAAAGTCAGCCAGCCAGCTGCGC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTCTGCAGGCTGGTCCGTaGACCTGCCCGGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFLQAGP*TCPGRG
Trigger: GCCTCTGCCCGGGCAGGTTCACGGACCAGCCTGCAG...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCACCGGCGCCCAACGCCTaGCCAGCAACAGCACAACGC +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESPAPNA*PATAQR
Trigger: GCGTTGTGCTGTTGCTGGGCAGGCGTTGGGCGCCGG...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGCCTCTGCGGCGATCTaGACTTCAGACGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHASAAI*TSDEPG
Trigger: CCCGGGCTCGTCTGAAGTGCAGATCGCCGCAGAGGC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACCCCTTACTCTCTGGGTaGCGCCGTGGGGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHPLLSG*RRGGSV
Trigger: CACAGAGCCCCCACGGCGGCACCCAGAGAGTAAGGG...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGCTCTTCTCAGAGCTGTaGTTCTTCCCTGCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRLFSEL*FFPAGG
Trigger: GCCGCCCGCAGGGAAGAAGCACAGCTCTGAGAAGAG...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGGGCTCGGCCCGTATTaGCTCGCGCTAATCCTGATG +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRGLGPY*LALILM
Trigger: CATCAGGATTAGCGCGAGCCAATACGGGCCGAGCCC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCATCCTGGGTCAGGTGCTaGCTGTCCGGTGGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESSWVRC*LSGGPQ
Trigger: CTGCGGCCCACCGGACAGCCAGCACCTGACCCAGGA...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGCTCCTGGGGCCCTCTaGTGGCGCAGCTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFAPGAL*WRSWLA
Trigger: AGCCAGCCAGCTGCGCCACCAGAGGGCCCCAGGAGC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGGGGCTCTGTGCTCCTaGGGCCCTCTGGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTGALCS*GPLVAQ
Trigger: CTGCGCCACCAGAGGGCCCCAGGAGCACAGAGCCCC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGCTGCCCTTACTCTCTaGGTGCCGCCGTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESAALTL*VPPWGL
Trigger: GAGCCCCCACGGCGGCACCCAGAGAGTAAGGGCAGC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAACGGTTTGCCTTTGTaGGGGCTCCTGCTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRNGLPL*GLLLCR
Trigger: CCGGCACAGCAGGAGCCCCCACAAAGGCAAACCGTT...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTTGCGGCTGTCCTCCTaGACCACCACGGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQILRLSS*TTTAWR
Trigger: CCGCCAAGCCGTGGTGGTCCAGGAGGACAGCCGCAA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACACGATCCTGGGTCAGGTaGTGGCTGTCCGGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTRSWVR*WLSGGP
Trigger: CGGCCCACCGGACAGCCAGCACCTGACCCAGGATCG...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGTGCTGCCATGAACCTTaGTGCTTCCTTGCGTCCGGG +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRCCHEP*CFLASG
Trigger: CCCGGACGCAAGGAAGCAGCAAGGTTCATGGCAGCA...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGGCTCCCTTTCCCCCTaGAGGCTGGTCCGTGAACCT +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHGSLSP*RLVREP
Trigger: AGGTTCACGGACCAGCCTGCAGGGGGAAAGGGAGCC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACAGGTGGCACCCCATGTaGTGTGGCTCCTCCTCACCG +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHRWHPM*CGSSSP
Trigger: CGGTGAGGAGGAGCCACAGCACATGGGGTGCCACCT...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGTGCTGGCTGTCCGGTaGGCCGCAGCTTTTGGCATG +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHVLAVR*AAAFGM
Trigger: CATGCCAAAAGCTGCGGCCCACCGGACAGCCAGCAC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACATCCTGGGTCAGGTGCTaGCTGTCCGGTGGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTSWVRC*LSGGPQ
Trigger: CTGCGGCCCACCGGACAGCCAGCACCTGACCCAGGA...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATCCTGGGGCCCTCTGGTaGCGCAGCTGGCTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNPGALW*RSWLAD
Trigger: GTCAGCCAGCCAGCTGCGCCACCAGAGGGCCCCAGG...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCATTTCCCCCTGCAGGCTaGTCCGTGAACCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESFPPAG*SVNLPG
Trigger: CCCGGGCAGGTTCACGGACCAGCCTGCAGGGGGAAA...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGGGGCACTGCTGGCTTaGGTTCGTTGCTTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHGALLA*VRCLLR
Trigger: CCGCAGCAAGCAACGAACCCAAGCCAGCAGTGCCCC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGCTGCCACTGTGGGGTaGGCCCTGGCTCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESAATVG*ALALSQ
Trigger: CTGACTGAGAGCCAGGGCCCACCCCACAGTGGCAGC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACACTGCCGCTGCCACTGTaGGGTGGGCCCTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTLPLPL*GGPWLS
Trigger: TGAGAGCCAGGGCCCACCCCACAGTGGCAGCGGCAG...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCATTGCGGCTGTCCTCCTaGACCACCACGGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESLRLSS*TTTAWR
Trigger: CCGCCAAGCCGTGGTGGTCCAGGAGGACAGCCGCAA...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCACCCTTCCCGGGAGGCTaGGGTATCCGAGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESPFPGG*GIRESR
Trigger: CCTGCTCTCTCGGATACCCCAGCCTCCCGGGAAGGG...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGTGCAGACCTCGAGGTaGCACCCCATGTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHVQTSR*HPMCCG
Trigger: GCCACAGCACATGGGGTGCCACCTCGAGGTCTGCAC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGCCCGCCTACTTAAATaGGCAGGGCGCTCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTARLLK*AGRSAA
Trigger: GGCCGCCGAGCGCCCTGCCCATTTAAGTAGGCGGGC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544085.6
CDS-3UTR TCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGCGCAGCTGGCTGGCTaGCTTTGGTCAGCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIAQLAG*LWSASC
Trigger: ACAACTGGCTGACCAAAGTCAGCCAGCCAGCTGCGC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTGTGCCGGAGACTTCTaGCAGCTCCTCTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQICAGDF*QLLFPG
Trigger: CCCCGGAAAGAGGAGCTGTCAGAAGTCTCCGGCACA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACTGCAGGCTGGTCCGTaGACCTGCCCGGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWELQAGP*TCPGRG
Trigger: GCCTCTGCCCGGGCAGGTTCACGGACCAGCCTGCAG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACCACACTGCCAGCACTTaGCTGGGACCCTACGGAGCT +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHHTAST*LGPYGA
Trigger: AGCTCCGTAGGGTCCCAGTCAAGTGCTGGCAGTGTG...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGCCACCAAACTGCTGTTaGGGGCCAAGGTGCACACAT +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRPPNCC*GPRCTH
Trigger: ATGTGTGCACCTTGGCCCTCAACAGCAGTTTGGTGG...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTCCCTTACTCTCTGGGTaGCGCCGTGGGGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFPLLSG*RRGGSV
Trigger: CACAGAGCCCCCACGGCGGCACCCAGAGAGTAAGGG...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGATGGGAGTCTGTCTTTaGGGCTGTCCTCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRMGVCL*GCPPGP
Trigger: TGGTCCAGGAGGACAGCCGCAAAGACAGACTCCCAT...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACATGGACATCCGGGCACTaGGGCCTCTGCGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTWTSGH*GLCGDL
Trigger: CAGATCGCCGCAGAGGCCCCAGTGCCCGGATGTCCA...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGCCGCGCTCACCATTTaGCGGAGCCGGGCGGGGACG +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQAALTI*RSRAGT
Trigger: CGTCCCCGCCCGGCTCCGCCAAATGGTGAGCGCGGC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGCCGGACATAAGCCGTaGGCTTCTGCTGCATTGCAA +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRAGHKP*ASAALQ
Trigger: TTGCAATGCAGCAGAAGCCCACGGCTTATGTCCGGC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATGCTGCCCTTACTCTCTaGGTGCCGCCGTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNAALTL*VPPWGL
Trigger: GAGCCCCCACGGCGGCACCCAGAGAGTAAGGGCAGC...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTTTCCCCCTGCAGGCTaGTCCGTGAACCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFFPPAG*SVNLPG
Trigger: CCCGGGCAGGTTCACGGACCAGCCTGCAGGGGGAAA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACACCCTTCCCGGGAGGCTaGGGTATCCGAGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTPFPGG*GIRESR
Trigger: CCTGCTCTCTCGGATACCCCAGCCTCCCGGGAAGGG...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGGCTTGGCTGGCTTCTaGGAGGACGAGGACACGGGT +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESGLAGF*EDEDTG
Trigger: ACCCGTGTCCTCGTCCTCCCAGAAGCCAGCCAAGCC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGCTCCGAGGAGCTTCTaGAGCCCTTCCCCTCTACTC +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHAPRSF*SPSPLL
Trigger: GAGTAGAGGGGAAGGGCTCCAGAAGCTCCTCGGAGC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGGCAGGGGTAGGAAATaGCAGCGCCAAGTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIGRGRK*QRQVLL
Trigger: CAGGAGGACTTGGCGCTGCCATTTCCTACCCCTGCC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGTCAAGGGAGCACTGTaGCTTGCCAACAGAACACGC +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRVKGAL*LANRTR
Trigger: GCGTGTTCTGTTGGCAAGCCACAGTGCTCCCTTGAC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATGTAGGGGGCAGAGCCTaGGCGCCGACAAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNVGGRA*APTSPA
Trigger: AGCAGGGCTTGTCGGCGCCCAGGCTCTGCCCCCTAC...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000544085.6
CDS-3UTR TCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACCCAGACGCAGGAGTGTaGATGGACTGGTGGTGGACA +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHPDAGV*MDWWWT
Trigger: TGTCCACCACCAGTCCATTCACACTCCTGCGTCTGG...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGGAGGTGGAAATGTCTaGGAAGGCGGCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFGGGNV*EGGWAG
Trigger: CCCTGCCCAGCCGCCTTCTCAGACATTTCCACCTCC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGCATCTTCAGTTTGGTaGGCTTGGCTTTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRASSVW*AWLWQA
Trigger: TGCCTGCCAAAGCCAAGCTCACCAAACTGAAGATGC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACAGTGTCCCTGAGCGGTaGGAGCAGCTTGGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHSVPER*EQLGVS
Trigger: AGAGACACCAAGCTGCTCTCACCGCTCAGGGACACT...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCACACACTGCCAGCACTTaGCTGGGACCCTACGGAGCT +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESHTAST*LGPYGA
Trigger: AGCTCCGTAGGGTCCCAGTCAAGTGCTGGCAGTGTG...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACCTTTATTCTTCCTCGTaGGGGCCTCGGCCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHLYSSS*GPRPVP
Trigger: GGGAACAGGCCGAGGCCCTCACGAGGAAGAATAAAG...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGCCTCTGGGCTCACTTaGAGTTGTCCGAGTCCGCCG +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTASGLT*SCPSPP
Trigger: CGGCGGACTCGGACAACTTCAAGTGAGCCCAGAGGC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544085.6
CDS-3UTR GCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGGGCACTGGGGCCTCTaGGGCGATCTGCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTGHWGL*GDLHFR
Trigger: TCTGAAGTGCAGATCGCCGCAGAGGCCCCAGTGCCC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGCCGTGGGGGCTCTGTaGTCCTGGGGCCCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQAVGAL*SWGPLV
Trigger: CACCAGAGGGCCCCAGGAGCACAGAGCCCCCACGGC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGGCTCCCTTTCCCCCTaGAGGCTGGTCCGTGAACCT +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTGSLSP*RLVREP
Trigger: AGGTTCACGGACCAGCCTGCAGGGGGAAAGGGAGCC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACTGGCTTGGGTTCGTTaGTTGCTGCGGCCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWELAWVR*LLRPGA
Trigger: GGCCCCGGGCCGCAGCAAGCAACGAACCCAAGCCAG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGTGGTGTGCCTGTGCTTaGAATGCATGGAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRWCACA*NAWRRC
Trigger: GCACCTTCTCCATGCATTGCAAGCACAGGCACACCA...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307808.10
CDS-3UTR GCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGAGCTGGGGTCAATGTaGAGCGCTCTAGGCAATGGG +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIELGSM*SALGNG
Trigger: CCCATTGCCTAGAGCGCTGCACATTGACCCCAGCTC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGTGCTGGCTGTCCGGTaGGCCGCAGCTTTTGGCATG +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFVLAVR*AAAFGM
Trigger: CATGCCAAAAGCTGCGGCCCACCGGACAGCCAGCAC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAGAAAGCTCCCTCTCTaGAGCCGAATCTGTCACCGA +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRRKLPL*SRICHR
Trigger: TCGGTGACAGATTCGGCTCCAGAGAGGGAGCTTTCT...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGTTCTGGAAGGGACTGTaGAGCACTTGGAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRFWKGL*STWRCR
Trigger: TCTGCACCTCCAAGTGCTCCACAGTCCCTTCCAGAA...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGGGGCACTGCTGGCTTaGGTTCGTTGCTTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFGALLA*VRCLLR
Trigger: CCGCAGCAAGCAACGAACCCAAGCCAGCAGTGCCCC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTCTGTGGGGTGGGCCCTaGCTCTCAGTCAGGGGAACA +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFLWGGP*LSVRGT
Trigger: TGTTCCCCTGACTGAGAGCCAGGGCCCACCCCACAG...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTGGACCACCACGGCTTaGCGGCAGCCACTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFWTTTA*RQPLVL
Trigger: CAGGACTAGTGGCTGCCGCCAAGCCGTGGTGGTCCA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGGCTTGGCTGGCTTCTaGGAGGACGAGGACACGGGT +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFGLAGF*EDEDTG
Trigger: ACCCGTGTCCTCGTCCTCCCAGAAGCCAGCCAAGCC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTACTGCTGGCACTTTTaGGAGGGTCCTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIYCWHF*EGPGHR
Trigger: CCTGTGGCCAGGACCCTCCCAAAAGTGCCAGCAGTA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGATTCTGGATGGTGACTaGGGTGCTGATAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRILDGD*GADSGS
Trigger: GCTGCCACTATCAGCACCCCAGTCACCATCCAGAAT...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACACAGCGCTCTAGGCAATaGGGAGATTGGGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTQRSRQ*GDWGRQ
Trigger: CTGCCGCCCCCAATCTCCCCATTGCCTAGAGCGCTG...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGAGCCGAACCCCTCCTaGCCAAGGCGATCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEEPNPS*PRRSWV
Trigger: GACCCAGGATCGCCTTGGTCAGGAGGGGTTCGGCTC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGTTGGAATGTATAGGTaGCAAAGGGGGAACTGGGGA +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRVGMYR*QRGNWG
Trigger: TCCCCAGTTCCCCCTTTGTCACCTATACATTCCAAC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTGTGCCGGAGACTTCTaGCAGCTCCTCTTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFCAGDF*QLLFPG
Trigger: CCCCGGAAAGAGGAGCTGTCAGAAGTCTCCGGCACA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAAGTGTCCCTGAGCGGTaGGAGCAGCTTGGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESSVPER*EQLGVS
Trigger: AGAGACACCAAGCTGCTCTCACCGCTCAGGGACACT...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATGGGCACTGGGGCCTCTaGGGCGATCTGCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNGHWGL*GDLHFR
Trigger: TCTGAAGTGCAGATCGCCGCAGAGGCCCCAGTGCCC...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACACCTTGCTGCTTCCTTaGGTCCGGGGAAGAGTTTGC +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHTLLLP*VRGRVC
Trigger: GCAAACTCTTCCCCGGACGCAAGGAAGCAGCAAGGT...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACATGGCACTGTCGCTGCTaGCCTTACTCTCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTWHCRC*PYSLGA
Trigger: GGCACCCAGAGAGTAAGGGCAGCAGCGACAGTGCCA...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACATGGGGGCTCCTGCTGTaGCGGAGACTTCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTWGLLL*RRLLTA
Trigger: AGCTGTCAGAAGTCTCCGGCACAGCAGGAGCCCCCA...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGGGTTCGTTGCTTGCTaGGGCCCGGGGCCGTCCTTT +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEGFVAC*GPGPSF
Trigger: AAAGGACGGCCCCGGGCCGCAGCAAGCAACGAACCC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAACTGGCTTGGGTTCGTTaGTTGCTGCGGCCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQLAWVR*LLRPGA
Trigger: GGCCCCGGGCCGCAGCAAGCAACGAACCCAAGCCAG...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGCTGTGCTTCTTCCCTaGGGGCGGCTGTTTATCTTC +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIAVLLP*GRLFIF
Trigger: GAAGATAAACAGCCGCCCGCAGGGAAGAAGCACAGC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTCACTGCTCCCCACACTaGCAGCACTTGACTGGGACC +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFHCSPH*QHLTGT
Trigger: GGTCCCAGTCAAGTGCTGGCAGTGTGGGGAGCAGTG...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGGGAGCACTGTGGCTTaGCAACAGAACACGCACATG +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIGSTVA*QQNTHM
Trigger: CATGTGCGTGTTCTGTTGGCAAGCCACAGTGCTCCC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGTGGCTGCGCCATCTTTaGATTGTGGCTAATGTTGCC +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRWLRHL*IVANVA
Trigger: GGCAACATTAGCCACAATCCAAAGATGGCGCAGCCA...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGTGGGCCGCAGCTTTTaGCATGGAGACTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIVGRSF*HGDLAL
Trigger: CAATGCCAAGTCTCCATGCCAAAAGCTGCGGCCCAC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGCCGGACATAAGCCGTaGGCTTCTGCTGCATTGCAA +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHAGHKP*ASAALQ
Trigger: TTGCAATGCAGCAGAAGCCCACGGCTTATGTCCGGC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTAACGGTTTGCCTTTGTaGGGGCTCCTGCTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFNGLPL*GLLLCR
Trigger: CCGGCACAGCAGGAGCCCCCACAAAGGCAAACCGTT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAACTGCCGCTGCCACTGTaGGGTGGGCCCTGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQLPLPL*GGPWLS
Trigger: TGAGAGCCAGGGCCCACCCCACAGTGGCAGCGGCAG...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGTCTCTCAAAGGCAATaGGAGTCTGTCTTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRVSQRQ*ESVFAA
Trigger: AGCCGCAAAGACAGACTCCCATTGCCTTTGAGAGAC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTCTTCTGCTTTCCTCTaGCGGCTCCCCTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFSSAFL*RLPFPG
Trigger: TCCCGGGAAGGGGAGCCGCCAGAGGAAAGCAGAAGA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGGCAGGGGTAGGAAATaGCAGCGCCAAGTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFGRGRK*QRQVLL
Trigger: CAGGAGGACTTGGCGCTGCCATTTCCTACCCCTGCC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGTCAAGGGAGCACTGTaGCTTGCCAACAGAACACGC +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIVKGAL*LANRTR
Trigger: GCGTGTTCTGTTGGCAAGCCACAGTGCTCCCTTGAC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCACTGCTGGAATGTGCTaGTGCCACTGGTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQITAGMC*CHWFWK
Trigger: CTTCCAGAACCAGTGGCATCAGCACATTCCAGCAGT...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGGGGAGGAGTGTCCCTaGGCGGTGAGAGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQGEECP*AVRAAW
Trigger: CCAAGCTGCTCTCACCGCTCAGGGACACTCCTCCCC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGTCTGCTTCCCGCCTTaGCCTCTTAAGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESVCFPP*PLKCRL
Trigger: AAGCCTGCACTTAAGAGGTCAAGGCGGGAAGCAGAC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAACCTTGCTGCTTCCTTaGGTCCGGGGAAGAGTTTGC +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESTLLLP*VRGRVC
Trigger: GCAAACTCTTCCCCGGACGCAAGGAAGCAGCAAGGT...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTGCTGCCATGAACCTTaGTGCTTCCTTGCGTCCGGG +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFCCHEP*CFLASG
Trigger: CCCGGACGCAAGGAAGCAGCAAGGTTCATGGCAGCA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACATCGTGGCACTGTCGCTaGTGCCCTTACTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTSWHCR*CPYSLG
Trigger: ACCCAGAGAGTAAGGGCAGCAGCGACAGTGCCACGA...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGGAACAAGAGCAAAGTaGTCAGGGGTCCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESGTRAK*SGVLSS
Trigger: GGAGGACAGGACCCCTGAGCACTTTGCTCTTGTTCC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCACGGCTGTTTATCTTCTaGTTTCCTCTGGCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESRLFIF*FPLAAP
Trigger: GGGAGCCGCCAGAGGAAAGCAGAAGATAAACAGCCG...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACACCGGAAGAACCCTTGTaGTCCGAGGAGCTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTPEEPL*SEELLE
Trigger: CTCCAGAAGCTCCTCGGAGCACAAGGGTTCTTCCGG...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATGGCAGCCACCCCACTaGTCCCCACACTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQWQPPH*SPHCQH
Trigger: GTGCTGGCAGTGTGGGGAGCAGTGGGGTGGCTGCCA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGTCACCGAAGCACAGTaGTCTCCGTCAGCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTVTEAQ*SPSALR
Trigger: CCGAAGAGCTGACGGAGACCACTGTGCTTCGGTGAC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGGAGGGAGGCTTCTCTaGGGTTTGTTCACTGTCACT +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIGGRLL*GLFTVT
Trigger: AGTGACAGTGAACAAACCCCAGAGAAGCCTCCCTCC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAAATGCTCCTGACTCGTaGCACTGTCGCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTNAPDS*HCRCCP
Trigger: AGGGCAGCAGCGACAGTGCCACGAGTCAGGAGCATT...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCACCTTGGGCTTGTCTTTaGAAGTCTGGTCTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESPWACL*KSGLGS
Trigger: GCTCCCGAGACCAGACTTCCAAAGACAAGCCCAAGG...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGCGGTGAGAGCAGCTTaGTGTCTCTCAAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIAVRAA*CLSKAM
Trigger: CATTGCCTTTGAGAGACACCAAGCTGCTCTCACCGC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTAAGTGCAGGCTTGGCTaGCTTCTGGGAGGACGAGGA +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFKCRLG*LLGGRG
Trigger: TCCTCGTCCTCCCAGAAGCCAGCCAAGCCTGCACTT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATGCTCCGAGGAGCTTCTaGAGCCCTTCCCCTCTACTC +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNAPRSF*SPSPLL
Trigger: GAGTAGAGGGGAAGGGCTCCAGAAGCTCCTCGGAGC...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACCATGGAGAAGGTGCCTaGGCGACTTTGGAAGAACTC +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHHGEGA*ATLEEL
Trigger: GAGTTCTTCCAAAGTCGCCCAGGCACCTTCTCCATG...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGGGCAAGATCATCTCTaGGGCCAGCCTCCTCATCTC +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTGQDHL*GQPPHL
Trigger: GAGATGAGGAGGCTGGCCCCAGAGATGATCTTGCCC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACAGCGCTCTAGGCAATaGGGAGATTGGGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEQRSRQ*GDWGRQ
Trigger: CTGCCGCCCCCAATCTCCCCATTGCCTAGAGCGCTG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACACTCACCGCTCCGACGTaGGCTGACTTTCAGCACAGT +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTLTAPT*ADFQHS
Trigger: ACTGTGCTGAAAGTCAGCCCACGTCGGAGCGGTGAG...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGCACCCCATGTGCTGTaGCTCCTCCTCACCGCTCCG +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQAPHVL*LLLTAP
Trigger: CGGAGCGGTGAGGAGGAGCCACAGCACATGGGGTGC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACATCGCTGAAGCAGGGGTaGGAAATGGCAGGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTSLKQG*EMAGVG
Trigger: TCCTACCCCTGCCATTTCCCACCCCTGCTTCAGCGA...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTCGCTGAAGCAGGGGTaGGAAATGGCAGGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFSLKQG*EMAGVG
Trigger: TCCTACCCCTGCCATTTCCCACCCCTGCTTCAGCGA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAACACGCACATGCTCTaGCACAATCTGCATAGAACC +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRNTHML*HNLHRT
Trigger: GGTTCTATGCAGATTGTGCCAGAGCATGTGCGTGTT...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGCATCCCTGAAGCCATaGCGAAACAAACACAGCGGT +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHASLKP*RNKHSG
Trigger: ACCGCTGTGTTTGTTTCGCCATGGCTTCAGGGATGC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACTTATTGCTGCTGCCATaGACCTTGCTGCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHLLLLP*TLLLPC
Trigger: GCAAGGAAGCAGCAAGGTTCATGGCAGCAGCAATAA...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGCCACCAAACTGTCTTaGGGGGTCTCTTTATCATGG +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIATKLS*GVSLSW
Trigger: CCATGATAAAGAGACCCCTCAAGACAGTTTGGTGGC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGTAGGTCTGCTCAACTaGCTGAGAAGGCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIVGLLN*LRRHLQ
Trigger: CTGAAGATGCCTTCTCAGTCAGTTGAGCAGACCTAC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGACAGAACTGACATGCTaGGAGTCCTTTGTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRTELTC*ESFVGK
Trigger: TTTCCCTACAAAGGACTCTCAGCATGTCAGTTCTGT...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGTCACTGGTGCTTTCTaGCTCTGCACTGCTGGAATG +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESVTGAF*LCTAGM
Trigger: CATTCCAGCAGTGCAGAGTCAGAAAGCACCAGTGAC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGATTCAGAATGCTCCTaGCTCGTGGCACTGTCGCTG +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFDSECS*LVALSL
Trigger: CAGCGACAGTGCCACGAGTCAGGAGCATTCTGAATC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACACCACCAAACTGCTGTTaGGGGCCAAGGTGCACACAT +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTPPNCC*GPRCTH
Trigger: ATGTGTGCACCTTGGCCCTCAACAGCAGTTTGGTGG...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATGAGAGTCCCTTTCGCTaGAGCAGGGGTGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNESPFR*SRGGKW
Trigger: CCATTTCCCACCCCTGCTTCAGCGAAAGGGACTCTC...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGAGGGACCAGACCTCTaGCTTAGTGACAACCAAAGA +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIEGPDL*LSDNQR
Trigger: TCTTTGGTTGTCACTAAGTCAGAGGTCTGGTCCCTC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACTACATGTCGATGGCCTaGACAAAGGTGAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHYMSMA*TKVNAA
Trigger: GGCAGCATTCACCTTTGTTCAGGCCATCGACATGTA...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATGTTACGGGACTACCTaGTCTCGAGCCCCGGGCGTC +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQCYGTT*SRAPGV
Trigger: GACGCCCGGGGCTCGAGAGCAGGTAGTCCCGTAACA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTGCCATGAACCTTGCTaGTTCCTTGCGTCCGGGGAA +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFCHEPC*FLASGE
Trigger: TTCCCCGGACGCAAGGAAGCAGCAAGGTTCATGGCA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACACTAGGCGTATGTATTaGTGTCAAAGGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHTRRMY*CQRRRP
Trigger: TGGCCGCCTCCTTTGACAGCAATACATACGCCTAGT...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATGGGGGCTCCTGCTGTaGCGGAGACTTCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEWGLLL*RRLLTA
Trigger: AGCTGTCAGAAGTCTCCGGCACAGCAGGAGCCCCCA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGGGAGGGAGCTCTTGTaGTTCTTCTTCTCACTGGAG +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESGRELL*FFFSLE
Trigger: CTCCAGTGAGAAGAAGAAGCACAAGAGCTCCCTCCC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGGAACAAGAGCAAAGTaGTCAGGGGTCCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTGTRAK*SGVLSS
Trigger: GGAGGACAGGACCCCTGAGCACTTTGCTCTTGTTCC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTATGGGAGTCTGTCTTTaGGGCTGTCCTCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFMGVCL*GCPPGP
Trigger: TGGTCCAGGAGGACAGCCGCAAAGACAGACTCCCAT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATCCGGAAGAACCCTTGTaGTCCGAGGAGCTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNPEEPL*SEELLE
Trigger: CTCCAGAAGCTCCTCGGAGCACAAGGGTTCTTCCGG...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAACGCCAAGTCCTCCTGTaGAGACCTCGAGGTGGCACC +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQRQVLL*RPRGGT
Trigger: GGTGCCACCTCGAGGTCTGCACAGGAGGACTTGGCG...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGGGAGCACTGTGGCTTaGCAACAGAACACGCACATG +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTGSTVA*QQNTHM
Trigger: CATGTGCGTGTTCTGTTGGCAAGCCACAGTGCTCCC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTTTCTGATAAATGCTTaGTGGGCCCTCCCACTCCTC +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIFLINA*WALPLL
Trigger: GAGGAGTGGGAGGGCCCAGCAAGCATTTATCAGAAA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACAAAGAGGGGATGGTGTaGCTGTGCTTCTTGCAATGC +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHKEGMV*LCFLQC
Trigger: GCATTGCAAGAAGCACAGGCACACCATCCCCTCTTT...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGGGCTCGGCCCGTATTaGCTCGCGCTAATCCTGATG +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEGLGPY*LALILM
Trigger: CATCAGGATTAGCGCGAGCCAATACGGGCCGAGCCC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGCCTCTTTCTCTTGGTaGGCTTCCTGGTTGCGTCTT +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESASFSW*ASWLRL
Trigger: AAGACGCAACCAGGAAGCCCACCAAGAGAAAGAGGC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGTTGCCAACAGAAAGTaGTCCAGACGCAGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESVANRK*SRRRSV
Trigger: CACACTCCTGCGTCTGGACCACTTTCTGTTGGCAAC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACCCGCAGCTTTTGGCATaGAGACTTGGCATTGGTTCA +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHPQLLA*RLGIGS
Trigger: TGAACCAATGCCAAGTCTCCATGCCAAAAGCTGCGG...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAAGAAAGCTCCCTCTCTaGAGCCGAATCTGTCACCGA +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESRKLPL*SRICHR
Trigger: TCGGTGACAGATTCGGCTCCAGAGAGGGAGCTTTCT...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGGTCCTTGGGAGATTTaGCTGGGCAATAGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHGPWEI*LGNSLY
Trigger: GTAAAGGCTATTGCCCAGCCAAATCTCCCAAGGACC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACTCACTGCTAGGTCCTTaGGAGATTTGGCTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHSLLGP*EIWLGN
Trigger: ATTGCCCAGCCAAATCTCCCAAGGACCTAGCAGTGA...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTCACTGCTAGGTCCTTaGGAGATTTGGCTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQISLLGP*EIWLGN
Trigger: ATTGCCCAGCCAAATCTCCCAAGGACCTAGCAGTGA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGATCTTGACCATCCATaGGCCGGACATAAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFDLDHP*AGHKPW
Trigger: CCACGGCTTATGTCCGGCCCATGGATGGTCAAGATC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCATAGTCCTCCGGCAGTaGTTTCAGTTCAGGGGATTC +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIIVLRQ*FQFRGF
Trigger: GAATCCCCTGAACTGAAACCACTGCCGGAGGACTAT...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGGTCGTCTTCGAGCATaGATGACGTTCCTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESGRLRA*MTFLAE
Trigger: CTCAGCAAGGAACGTCATCCATGCTCGAAGACGACC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGGTGGCGCAGCTGGCTaGCTGACTTTGGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQGGAAG*LTLVSQ
Trigger: CTGGCTGACCAAAGTCAGCCAGCCAGCTGCGCCACC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATGGACCACCACGGCTTaGCGGCAGCCACTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQWTTTA*RQPLVL
Trigger: CAGGACTAGTGGCTGCCGCCAAGCCGTGGTGGTCCA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATCTTCTGCTTTCCTCTaGCGGCTCCCCTTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWESSAFL*RLPFPG
Trigger: TCCCGGGAAGGGGAGCCGCCAGAGGAAAGCAGAAGA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATAAGTGCAGGCTTGGCTaGCTTCTGGGAGGACGAGGA +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNKCRLG*LLGGRG
Trigger: TCCTCGTCCTCCCAGAAGCCAGCCAAGCCTGCACTT...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGCTGACTTGGATGACTaGCTTTCAGACTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIADLDD*LSDSVA
Trigger: TGCCACAGAGTCTGAAAGCCAGTCATCCAAGTCAGC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGTGCCTGGGCGACTTTaGAAGAACTCTCGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIVPGRL*KNSRSV
Trigger: AACACTTCGAGAGTTCTTCCAAAGTCGCCCAGGCAC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGGGACCCTACGGAGCTaGCAGGAGAAGGCATTGGGG +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQGTLRS*QEKALG
Trigger: CCCCAATGCCTTCTCCTGCCAGCTCCGTAGGGTCCC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACTGCCAGCACTTGACTaGGACCCTACGGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWELPALD*DPTELA
Trigger: TGCCAGCTCCGTAGGGTCCCAGTCAAGTGCTGGCAG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATGGGCAAGATCATCTCTaGGGCCAGCCTCCTCATCTC +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNGQDHL*GQPPHL
Trigger: GAGATGAGGAGGCTGGCCCCAGAGATGATCTTGCCC...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGACCACTGCTACTAGGTaGCCAATGTTTTCACAATCC +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRTTATR*PMFSQS
Trigger: GGATTGTGAAAACATTGGCCACCTAGTAGCAGTGGT...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGCTTCTTGCAATGCATaGAGAAGGTGCCTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFASCNA*RRCLGD
Trigger: GTCGCCCAGGCACCTTCTCCATGCATTGCAAGAAGC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544085.6
CDS-3UTR TCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGTTGGAATGTATAGGTaGCAAAGGGGGAACTGGGGA +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESVGMYR*QRGNWG
Trigger: TCCCCAGTTCCCCCTTTGTCACCTATACATTCCAAC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGCATCTTCAGTTTGGTaGGCTTGGCTTTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTASSVW*AWLWQA
Trigger: TGCCTGCCAAAGCCAAGCTCACCAAACTGAAGATGC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGTAGGTCTGCTCAACTaGCTGAGAAGGCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESVGLLN*LRRHLQ
Trigger: CTGAAGATGCCTTCTCAGTCAGTTGAGCAGACCTAC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTCACTGTCACTGAGCTaGAGGTCGTCTTCGAGCATG +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFSLSLS*RSSSSM
Trigger: CATGCTCGAAGACGACCTTCAGCTCAGTGACAGTGA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTGTCCTCACTGTCACTaGGCTGAAGGTCGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFCPHCH*AEGRLR
Trigger: TCGAAGACGACCTTCAGCTCAGTGACAGTGAGGACA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACATGTCCTCACTGTCACTaGGCTGAAGGTCGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTCPHCH*AEGRLR
Trigger: TCGAAGACGACCTTCAGCTCAGTGACAGTGAGGACA...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACAGAGCAGGTCTAGGGTaGTCTTCACCATCAAGCTTT +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHRAGLG*SSPSSF
Trigger: AAAGCTTGATGGTGAAGATCACCCTAGACCTGCTCT...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACTTTATTCTTCCTCGTaGGGGCCTCGGCCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWELYSSS*GPRPVP
Trigger: GGGAACAGGCCGAGGCCCTCACGAGGAAGAATAAAG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGATGTTTCTTGTTCACTaGCGAAACTCTGAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRMFLVH*RNSELA
Trigger: AGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACAT...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGTGTTTTAGAGCTGGCTaGGAAATCTACCTGGAAATG +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRCFRAG*EIYLEM
Trigger: CATTTCCAGGTAGATTTCTCAGCCAGCTCTAAAACA...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCATACATGTCGATGGCCTaGACAAAGGTGAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESYMSMA*TKVNAA
Trigger: GGCAGCATTCACCTTTGTTCAGGCCATCGACATGTA...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAAGGAGCTGGATGGAATaGTGCTCCCTTTGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESRSWME*CSLCQE
Trigger: TTCCTGACAAAGGGAGCAGCATTCCATCCAGCTCCT...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGGTTCAGTTCTTGGCTaGGCCATCTTTGGATTGTGG +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESGSVLG*AIFGLW
Trigger: CCACAATCCAAAGATGGCGCAGCCAAGAACTGAACC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGCCGTGGGCTTCTGCTaGATTGCAACACTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESAVGFC*IATLFE
Trigger: CTCAAAAAGTGTTGCAATGCAGCAGAAGCCCACGGC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATTTGGTTCCAACGGTTTaGCTTTGTGGGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNLVPTV*LCGGSC
Trigger: GCAGGAGCCCCCACAAAGGCAAACCGTTGGAACCAA...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATCGGCTGTTTATCTTCTaGTTTCCTCTGGCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNRLFIF*FPLAAP
Trigger: GGGAGCCGCCAGAGGAAAGCAGAAGATAAACAGCCG...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAACTCTTCTCAGAGCTGTaGTTCTTCCCTGCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQLFSEL*FFPAGG
Trigger: GCCGCCCGCAGGGAAGAAGCACAGCTCTGAGAAGAG...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAACACTGCTCCCCACACTaGCAGCACTTGACTGGGACC +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQHCSPH*QHLTGT
Trigger: GGTCCCAGTCAAGTGCTGGCAGTGTGGGGAGCAGTG...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCACAGCCTCCTCATCTCTaGTTCTGCATAACCACAGTG +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESQPPHL*FCITTV
Trigger: CACTGTGGTTATGCAGAAGCAGAGATGAGGAGGCTG...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGGCAGGAGCGGGGGTTaGCTTCAATTTTATAAATTA +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRGRSGG*LQFYKL
Trigger: TAATTTATAAAATTGAAGGCAACCCCCGCTCCTGCC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAGATTTGGGACACATaGGTGCGTACATACACACAT +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRKIWDT*VRTYTH
Trigger: ATGTGTGTATGTACGCACGCATGTGTCCCAAATCTT...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCATGGTGGACACTAGTGTaGAAGGAGCTGGATGGAATG +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESWWTLV*KELDGM
Trigger: CATTCCATCCAGCTCCTTCCACACTAGTGTCCACCA...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGTTGCCAACAGAAAGTaGTCCAGACGCAGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTVANRK*SRRRSV
Trigger: CACACTCCTGCGTCTGGACCACTTTCTGTTGGCAAC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGGGGTCTCTTTATCATaGACTTTCACTGCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIGVSLS*TFTARS
Trigger: GGACCTAGCAGTGAAAGTCCATGATAAAGAGACCCC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGGAGGGAGGCTTCTCTaGGGTTTGTTCACTGTCACT +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFGGRLL*GLFTVT
Trigger: AGTGACAGTGAACAAACCCCAGAGAAGCCTCCCTCC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACATTCTGGAAGGGACTGTaGAGCACTTGGAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTFWKGL*STWRCR
Trigger: TCTGCACCTCCAAGTGCTCCACAGTCCCTTCCAGAA...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCAACTGTCTGAGTCACTaGTGCTTTCTGACTCTGCAC +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQINCLSH*CFLTLH
Trigger: GTGCAGAGTCAGAAAGCACCAGTGACTCAGACAGTT...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATCCTTGGGCTTGTCTTTaGAAGTCTGGTCTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNPWACL*KSGLGS
Trigger: GCTCCCGAGACCAGACTTCCAAAGACAAGCCCAAGG...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATACTGCTGGCACTTTTaGGAGGGTCCTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEYCWHF*EGPGHR
Trigger: CCTGTGGCCAGGACCCTCCCAAAAGTGCCAGCAGTA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTGCTCTTGGTACTGCTaGCACTTTTGGGAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFCSWYC*HFWEGP
Trigger: AGGACCCTCCCAAAAGTGCCAGCAGTACCAAGAGCA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGCTGACTTGGATGACTaGCTTTCAGACTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESADLDD*LSDSVA
Trigger: TGCCACAGAGTCTGAAAGCCAGTCATCCAAGTCAGC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAACTGCCAGCACTTGACTaGGACCCTACGGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQLPALD*DPTELA
Trigger: TGCCAGCTCCGTAGGGTCCCAGTCAAGTGCTGGCAG...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCACAAGCCACTGTTCATTaGCAGAAAGTGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESQATVH*QKVGHS
Trigger: ACTGTGCCCCACTTTCTGCCAATGAACAGTGGCTTG...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGACAGCTGTCATTCTCTaGCTTTCACCTAAACATGAG +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRTAVIL*LSPKHE
Trigger: CTCATGTTTAGGTGAAAGCCAGAGAATGACAGCTGT...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACAACACGCACATGCTCTaGCACAATCTGCATAGAACC +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHNTHML*HNLHRT
Trigger: GGTTCTATGCAGATTGTGCCAGAGCATGTGCGTGTT...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
3UTR CAA 72 bp GAGATAAGCATCGCTCCCATCCCTCGACACATCCCTTaGTGTATTTACAAACTACCAAGAGAGTTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: EISIAPIPRHIP*CIYKLPREFLH
Trigger: ATGCAGGAACTCTCTTGGTAGTTTGTAAATACACAAAGGGATGTGTCGAGGGATGGGAGCGATGCTTATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
CDS-3UTR TCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGCCACCAAACTGTCTTaGGGGGTCTCTTTATCATGG +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTATKLS*GVSLSW
Trigger: CCATGATAAAGAGACCCCTCAAGACAGTTTGGTGGC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCACAGAACTGACATGCTaGGAGTCCTTTGTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQITELTC*ESFVGK
Trigger: TTTCCCTACAAAGGACTCTCAGCATGTCAGTTCTGT...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTTTGGGTTACAGAACTaGCATGCTGAGAGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIFGLQN*HAESPL
Trigger: CAAAGGACTCTCAGCATGTCAGTTCTGTAACCCAAA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATACTGCTGGAATGTGCTaGTGCCACTGGTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNTAGMC*CHWFWK
Trigger: CTTCCAGAACCAGTGGCATCAGCACATTCCAGCAGT...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATGTCACTGGTGCTTTCTaGCTCTGCACTGCTGGAATG +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNVTGAF*LCTAGM
Trigger: CATTCCAGCAGTGCAGAGTCAGAAAGCACCAGTGAC...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGATTCAGAATGCTCCTaGCTCGTGGCACTGTCGCTG +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEDSECS*LVALSL
Trigger: CAGCGACAGTGCCACGAGTCAGGAGCATTCTGAATC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACTTGTCAAACTTCACTTaGGGCTTCCCTGGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHLSNFT*GFPGLE
Trigger: CTCTAAACCAGGGAAGCCTCAAGTGAAGTTTGACAA...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCATTTGCCTCCCTCATGTaGAGGTCTGCTTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESFASLM*RSACCL
Trigger: CAAACAACAAGCAGACCTTCACATGAGGGAGGCAAA...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATAGACCACTCACACTGTaGGAGATAAGCATCGCTCCC +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNRPLTL*EISIAP
Trigger: GGGAGCGATGCTTATCTCTCACAGTGTGAGTGGTCT...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTAGGAGCTGGATGGAATaGTGCTCCCTTTGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFRSWME*CSLCQE
Trigger: TTCCTGACAAAGGGAGCAGCATTCCATCCAGCTCCT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGGTTCAGTTCTTGGCTaGGCCATCTTTGGATTGTGG +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFGSVLG*AIFGLW
Trigger: CCACAATCCAAAGATGGCGCAGCCAAGAACTGAACC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACTACTGTTATTGCTGCTaGCATGAACCTTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHYCYCC*HEPCCF
Trigger: GAAGCAGCAAGGTTCATGGCAGCAGCAATAACAGTA...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACCTTTACTGTTATTGCTaGTGCCATGAACCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHLYCYC*CHEPCC
Trigger: GCAGCAAGGTTCATGGCAGCAGCAATAACAGTAAAG...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCAGCCAGTTGTCCAGCTaGCATTTGTTTGTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQISQLSS*HLFVVG
Trigger: TCCAACAACAAACAAATGGCAGCTGGACAACTGGCT...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATCGTGGCACTGTCGCTaGTGCCCTTACTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQSWHCR*CPYSLG
Trigger: ACCCAGAGAGTAAGGGCAGCAGCGACAGTGCCACGA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATTGGTTCCAACGGTTTaGCTTTGTGGGGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWELVPTV*LCGGSC
Trigger: GCAGGAGCCCCCACAAAGGCAAACCGTTGGAACCAA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATGGGAGGGAGCTCTTGTaGTTCTTCTTCTCACTGGAG +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNGRELL*FFFSLE
Trigger: CTCCAGTGAGAAGAAGAAGCACAAGAGCTCCCTCCC...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGCTGTGCTTCTTCCCTaGGGGCGGCTGTTTATCTTC +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEAVLLP*GRLFIF
Trigger: GAAGATAAACAGCCGCCCGCAGGGAAGAAGCACAGC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCCACTGGAAAAGGATTTaGAGTATCTCCGGAAGAACC +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIHWKRI*SISGRT
Trigger: GGTTCTTCCGGAGATACTGCAAATCCTTTTCCAGTG...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGTACCAAGAGAGTTCCTaGATTCATCATAGGGATCTT +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRYQESS*IHHRDL
Trigger: AAGATCCCTATGATGAATGCAGGAACTCTCTTGGTA...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACAACAGAACACGCACATaGTCTGGCACAATCTGCATA +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHNRTRT*SGTICI
Trigger: TATGCAGATTGTGCCAGAGCATGTGCGTGTTCTGTT...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACTCTATTTCTGATAAATaGTTGCTGGGCCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHSISDK*LLGPPT
Trigger: AGTGGGAGGGCCCAGCAAGCATTTATCAGAAATAGA...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGACAAGGGAGATAAGTaGGGTCCAATCTGTGTAAGG +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESDKGDK*GPICVR
Trigger: CCTTACACAGATTGGACCGCACTTATCTCCCTTGTC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAACCCTGTCAAGAAAGTTaGGGTGGTACGGCCCGCCTA +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQPCQES*GGTARL
Trigger: TAGGCGGGCCGTACCACCGCAACTTTCTTGACAGGG...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTATGGAGACTTGGCATTaGTTCAGTTCTTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFMETWH*FSSWLR
Trigger: GCGCAGCCAAGAACTGAACCAATGCCAAGTCTCCAT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGTGGGCCGCAGCTTTTaGCATGGAGACTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEVGRSF*HGDLAL
Trigger: CAATGCCAAGTCTCCATGCCAAAAGCTGCGGCCCAC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGTCACCGAAGCACAGTaGTCTCCGTCAGCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQVTEAQ*SPSALR
Trigger: CCGAAGAGCTGACGGAGACCACTGTGCTTCGGTGAC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCACGGGGAAGAGTTTGCTaGTTGGAATGTATAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESRGRVC*LECIGD
Trigger: GTCACCTATACATTCCAACCAGCAAACTCTTCCCCG...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACCTTGGGAGATTTGGCTaGGCAATAGCCTTTACTGTT +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHLGRFG*AIAFTV
Trigger: AACAGTAAAGGCTATTGCCCAGCCAAATCTCCCAAG...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGGTCCTTGGGAGATTTaGCTGGGCAATAGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTGPWEI*LGNSLY
Trigger: GTAAAGGCTATTGCCCAGCCAAATCTCCCAAGGACC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGATCTTGACCATCCATaGGCCGGACATAAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEDLDHP*AGHKPW
Trigger: CCACGGCTTATGTCCGGCCCATGGATGGTCAAGATC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACCACAATGGACTTCATTaGAGTAGGTCTGCTCAACTG +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHHNGLH*SRSAQL
Trigger: CAGTTGAGCAGACCTACTCCAATGAAGTCCATTGTG...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGGAGGCGGCCATGAATaGGTCATTTCCTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTGGGHE*VISFRI
Trigger: GATTCTGAAGGAAATGACCCATTCATGGCCGCCTCC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAAATGCTCCTGACTCGTaGCACTGTCGCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQNAPDS*HCRCCP
Trigger: AGGGCAGCAGCGACAGTGCCACGAGTCAGGAGCATT...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCCAGAGTAAGCTGACTTaGATGACTGGCTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIQSKLT*MTGFQT
Trigger: AGTCTGAAAGCCAGTCATCCAAGTCAGCTTACTCTG...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGGCATTGAATCAACCTaGGGCTCCATTAAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHGIEST*GSIKVF
Trigger: AAACACCTTAATGGAGCCCCAGGTTGATTCAATGCC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTAGTGGACAAATGTCCTaGCCATCTCGTGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFSGQMS*PSRGAS
Trigger: AGAAGCACCACGAGATGGCCAGGACATTTGTCCACT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATATGAGAAGTCAGAGCTaGGGTCAATGTGCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNMRSQS*GQCAAL
Trigger: GAGCGCTGCACATTGACCCCAGCTCTGACTTCTCAT...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGACGAAACTCTGAGTTaGCTGGACAACATGAGTTAC +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIDETLS*LDNMSY
Trigger: GTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCATGTACAGGGGCAGAATaGGACAAAGGCGGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESCTGAE*DKGGEK
Trigger: TTTTTCTCCGCCTTTGTCCCATTCTGCCCCTGTACA...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACAAAGGAGGCGGCCATaGATGGGTCATTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEQRRRP*MGHFLQ
Trigger: CTGAAGGAAATGACCCATTCATGGCCGCCTCCTTTG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATCACTGTCACTGAGCTaGAGGTCGTCTTCGAGCATG +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWESLSLS*RSSSSM
Trigger: CATGCTCGAAGACGACCTTCAGCTCAGTGACAGTGA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGTCTGCTTCCCGCCTTaGCCTCTTAAGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQVCFPP*PLKCRL
Trigger: AAGCCTGCACTTAAGAGGTCAAGGCGGGAAGCAGAC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATCAATTCCGCACTCAATaGAGGACAAGACGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNQFRTQ*RTRRLP
Trigger: TGGAAGCCGTCTTGTCCTTCATTGAGTGCGGAATTG...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGACAATCAAGGACTCTaGAAGTCTAGTTTTGCTATA +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRDNQGL*KSSFAI
Trigger: TATAGCAAAACTAGACTTTCAGAGTCCTTGATTGTC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATGAGGGACCAGACCTCTaGCTTAGTGACAACCAAAGA +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNEGPDL*LSDNQR
Trigger: TCTTTGGTTGTCACTAAGTCAGAGGTCTGGTCCCTC...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTGTTTTAGAGCTGGCTaGGAAATCTACCTGGAAATG +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQICFRAG*EIYLEM
Trigger: CATTTCCAGGTAGATTTCTCAGCCAGCTCTAAAACA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAAGCTGGATGGAATGCTaGTCCCTTTGTCAGGAATTA +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESSWMEC*SLCQEL
Trigger: TAATTCCTGACAAAGGGAGCAGCATTCCATCCAGCT...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATGCCATGAACCTTGCTaGTTCCTTGCGTCCGGGGAA +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQCHEPC*FLASGE
Trigger: TTCCCCGGACGCAAGGAAGCAGCAAGGTTCATGGCA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCATACTGTTATTGCTGCTaGCATGAACCTTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESYCYCC*HEPCCF
Trigger: GAAGCAGCAAGGTTCATGGCAGCAGCAATAACAGTA...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATACTAGGCGTATGTATTaGTGTCAAAGGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNTRRMY*CQRRRP
Trigger: TGGCCGCCTCCTTTGACAGCAATACATACGCCTAGT...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATAATGCATGGAGAAGGTaGCTGGGCGACTTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNNAWRR*LGDFGR
Trigger: TCTTCCAAAGTCGCCCAGGCACCTTCTCCATGCATT...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACTTGAGGCTTCCAATGTaGAAAAATAGTTCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHLRLPM*KNSSQG
Trigger: GCCTTGGGAACTATTTTTGCACATTGGAAGCCTCAA...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATCAGCCTCCTCATCTCTaGTTCTGCATAACCACAGTG +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNQPPHL*FCITTV
Trigger: CACTGTGGTTATGCAGAAGCAGAGATGAGGAGGCTG...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTAGAGTCAACAGTGACTaGCCTGTTAGAGAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFRVNSD*PVRESL
Trigger: AAGGGACTCTCTAACAGGGCAGTCACTGTTGACTCT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGACAAGGGAGATAAGTaGGGTCCAATCTGTGTAAGG +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFDKGDK*GPICVR
Trigger: CCTTACACAGATTGGACCGCACTTATCTCCCTTGTC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATTGGTGGACACTAGTGTaGAAGGAGCTGGATGGAATG +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNWWTLV*KELDGM
Trigger: CATTCCATCCAGCTCCTTCCACACTAGTGTCCACCA...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGCCATCTTTGGATTGTaGCTAATGTTGCCAACAGAA +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQIAIFGL*LMLPTE
Trigger: TTCTGTTGGCAACATTAGCCACAATCCAAAGATGGC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGGGGTCTCTTTATCATaGACTTTCACTGCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTGVSLS*TFTARS
Trigger: GGACCTAGCAGTGAAAGTCCATGATAAAGAGACCCC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCACACAATGGACTTCATTaGAGTAGGTCTGCTCAACTG +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESHNGLH*SRSAQL
Trigger: CAGTTGAGCAGACCTACTCCAATGAAGTCCATTGTG...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATGGAGGCGGCCATGAATaGGTCATTTCCTTCAGAATC +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNGGGHE*VISFRI
Trigger: GATTCTGAAGGAAATGACCCATTCATGGCCGCCTCC...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGGTCGTCTTCGAGCATaGATGACGTTCCTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEGRLRA*MTFLAE
Trigger: CTCAGCAAGGAACGTCATCCATGCTCGAAGACGACC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAACACCATCAAGCTTTGTaGGGGAGGAGTGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQHHQAL*GRSVPE
Trigger: CTCAGGGACACTCCTCCCCCACAAAGCTTGATGGTG...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATGCTCTTGGTACTGCTaGCACTTTTGGGAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWECSWYC*HFWEGP
Trigger: AGGACCCTCCCAAAAGTGCCAGCAGTACCAAGAGCA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGTTTAGAGTTACCATTTaGCAAAGAAGGCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRFRVTI*QRRHWK
Trigger: TTTCCAGTGCCTTCTTTGCCAAATGGTAACTCTAAA...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATGTGCTTGCAATGCATaGAGAAGGTGCCTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQCACNA*RRCLGD
Trigger: GTCGCCCAGGCACCTTCTCCATGCATTGCAAGCACA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307808.10
CDS-3UTR CCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATAGTGGACAAATGTCCTaGCCATCTCGTGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNSGQMS*PSRGAS
Trigger: AGAAGCACCACGAGATGGCCAGGACATTTGTCCACT...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGAAAGTGGGGCACAGTaGAGTCCTTCATTACTTATG +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESESGAQ*SPSLLM
Trigger: CATAAGTAATGAAGGACTCCACTGTGCCCCACTTTC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAAAATCTGTGCTTATaGGCACATGGGATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRKNLCL*AHGISD
Trigger: ATCAGAAATCCCATGTGCCCATAAGCACAGATTTTT...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACACAGCTGTCATTCTCTaGCTTTCACCTAAACATGAG +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHTAVIL*LSPKHE
Trigger: CTCATGTTTAGGTGAAAGCCAGAGAATGACAGCTGT...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACATTGTCAAACTTCACTTaGGGCTTCCCTGGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTLSNFT*GFPGLE
Trigger: CTCTAAACCAGGGAAGCCTCAAGTGAAGTTTGACAA...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTGCACACATTTGTGCTaGGCCGAGCAAAGAATTCTT +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFCTHLC*AEQRIL
Trigger: AAGAATTCTTTGCTCGGCTCAGCACAAATGTGTGCA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATGCGTGGCTACTGAGATaGCGTGAAATTCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNAWLLR*REIHFQ
Trigger: CTGAAAGTGAATTTCACGTCATCTCAGTAGCCACGC...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAAGACCACTCACACTGTaGGAGATAAGCATCGCTCCC +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQRPLTL*EISIAP
Trigger: GGGAGCGATGCTTATCTCTCACAGTGTGAGTGGTCT...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATACAACCCTTCACAATTaGCAGGTGGCTTGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNTTLHN*QVACSR
Trigger: CCTAGAACAAGCCACCTGTCAATTGTGAAGGGTTGT...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTCTAGCCCTTTCAAATaGTCTACCTCAGTACAGATT +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQISSPFK*STSVQI
Trigger: AATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGCCGTGGGCTTCTGCTaGATTGCAACACTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEAVGFC*IATLFE
Trigger: CTCAAAAAGTGTTGCAATGCAGCAGAAGCCCACGGC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTAGCCAGTTGTCCAGCTaGCATTTGTTTGTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFSQLSS*HLFVVG
Trigger: TCCAACAACAAACAAATGGCAGCTGGACAACTGGCT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGGTTGCTCTTGGTACTaGTGGCACTTTTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQGCSWY*WHFWEG
Trigger: ACCCTCCCAAAAGTGCCAGCAGTACCAAGAGCAACC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATCCCTCTACTCTTCTCTaGTTGGGAATGGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNPSTLL*LGMEES
Trigger: AGACTCTTCCATTCCCAAGCAGAGAAGAGTAGAGGG...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAAATGCATGGAGAAGGTaGCTGGGCGACTTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWENAWRR*LGDFGR
Trigger: TCTTCCAAAGTCGCCCAGGCACCTTCTCCATGCATT...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGGGATGGTGTGCCTGTaGTTGCAATGCATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQGMVCL*LQCMEK
Trigger: CTTCTCCATGCATTGCAAGCACAGGCACACCATCCC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307808.10
CDS-3UTR GCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAAAAGAGGGGATGGTGTaGCTGTGCTTGCAATGCATG +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEKEGMV*LCLQCM
Trigger: CATGCATTGCAAGCACAGGCACACCATCCCCTCTTT...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307808.10
CDS-3UTR GCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTCTCCTCATTTCATTTaGAACTTGTATCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQISPHFI*NLYPAG
Trigger: ACCAGCAGGATACAAGTTGCAAATGAAATGAGGAGA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCAATCTGCATAGAACCTaGCATAAAGAACACAACCCT +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQINLHRT*HKEHNP
Trigger: AGGGTTGTGTTCTTTATGGCAGGTTCTATGCAGATT...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAAACAGAACACGCACATaGTCTGGCACAATCTGCATA +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTNRTRT*SGTICI
Trigger: TATGCAGATTGTGCCAGAGCATGTGCGTGTTCTGTT...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGTTTCACTCCTTAAGATaGTTTGCATTTGTCTTACTC +
Preference number: 4 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRFHSLR*FAFVLL
Trigger: GAGTAAGACAAATGCAAAGCATCTTAAGGAGTGAAA...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACTTGTACAAACTTGACTaGGCTGCCATAATTCAGCTT +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHLYKLD*AAIIQL
Trigger: AAGCTGAATTATGGCAGCCCAGTCAAGTTTGTACAA...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTTGTACAAACTTGACTaGGCTGCCATAATTCAGCTT +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQILYKLD*AAIIQL
Trigger: AAGCTGAATTATGGCAGCCCAGTCAAGTTTGTACAA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATGGCTGCGCCATCTTTaGATTGTGGCTAATGTTGCC +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEWLRHL*IVANVA
Trigger: GGCAACATTAGCCACAATCCAAAGATGGCGCAGCCA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACACATTGGTTCAGTTCTTaGCTGCGCCATCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTHWFSS*LRHLWI
Trigger: AATCCAAAGATGGCGCAGCCAAGAACTGAACCAATG...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACATTTGGCATGGAGACTTaGCATTGGTTCAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTFGMET*HWFSSW
Trigger: CCAAGAACTGAACCAATGCCAAGTCTCCATGCCAAA...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATCGGGGAAGAGTTTGCTaGTTGGAATGTATAGGTGAC +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNRGRVC*LECIGD
Trigger: GTCACCTATACATTCCAACCAGCAAACTCTTCCCCG...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTCTTGGGAGATTTGGCTaGGCAATAGCCTTTACTGTT +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFLGRFG*AIAFTV
Trigger: AACAGTAAAGGCTATTGCCCAGCCAAATCTCCCAAG...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAATAGTCCTCCGGCAGTaGTTTCAGTTCAGGGGATTC +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEIVLRQ*FQFRGF
Trigger: GAATCCCCTGAACTGAAACCACTGCCGGAGGACTAT...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACACTTTCGTCTTCACCTTaGGCTTGTCTTTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTLSSSP*ACLWKS
Trigger: AGACTTCCAAAGACAAGCCCAAGGTGAAGACGAAAG...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGTCTCTCAAAGGCAATaGGAGTCTGTCTTTGCGGCT +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEVSQRQ*ESVFAA
Trigger: AGCCGCAAAGACAGACTCCCATTGCCTTTGAGAGAC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGCGGTGAGAGCAGCTTaGTGTCTCTCAAAGGCAATG +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQAVRAA*CLSKAM
Trigger: CATTGCCTTTGAGAGACACCAAGCTGCTCTCACCGC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACACACTTGAGGCTTCCCTaGTTTAGAGTTACCATTTGG +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTHLRLP*FRVTIW
Trigger: CCAAATGGTAACTCTAAACCAGGGAAGCCTCAAGTG...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGTGCCTGGGCGACTTTaGAAGAACTCTCGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEVPGRL*KNSRSV
Trigger: AACACTTCGAGAGTTCTTCCAAAGTCGCCCAGGCAC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGGCATTGAATCAACCTaGGGCTCCATTAAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFGIEST*GSIKVF
Trigger: AAACACCTTAATGGAGCCCCAGGTTGATTCAATGCC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGACGAAACTCTGAGTTaGCTGGACAACATGAGTTAC +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFDETLS*LDNMSY
Trigger: GTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATTGTACAGGGGCAGAATaGGACAAAGGCGGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNCTGAE*DKGGEK
Trigger: TTTTTCTCCGCCTTTGTCCCATTCTGCCCCTGTACA...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
3UTR CAA 72 bp TTTGGTGTCCTGATGAAACAAATGTCTGGACTGTTTTaGAGGCTTCCAATGTGCAAAAATAGTTCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: FGVLMKQMSGLF*RLPMCKNSSQG
Trigger: GCCTTGGGAACTATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGACACCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.8
ENST00000544085.6
CDS-3UTR TCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATTATTGCTGCTGCCATaGACCTTGCTGCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQLLLLP*TLLLPC
Trigger: GCAAGGAAGCAGCAAGGTTCATGGCAGCAGCAATAA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATTTGCCTCCCTCATGTaGAGGTCTGCTTGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEFASLM*RSACCL
Trigger: CAAACAACAAGCAGACCTTCACATGAGGGAGGCAAA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAACAATTCCGCACTCAATaGAGGACAAGACGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQQFRTQ*RTRRLP
Trigger: TGGAAGCCGTCTTGTCCTTCATTGAGTGCGGAATTG...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGCGTGGCTACTGAGATaGCGTGAAATTCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEAWLLR*REIHFQ
Trigger: CTGAAAGTGAATTTCACGTCATCTCAGTAGCCACGC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTCAAATCAAATCTAGCTaGGAACACTCTGGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFQIKSS*EHSGVK
Trigger: CTTCACTCCAGAGTGTTCTCAGCTAGATTTGATTTG...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTATCGAAATAAAGCCTaGTTCTGGTGCCTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFYRNKA*FWCLVL
Trigger: AAGGACAAGGCACCAGAATCAGGCTTTATTTCGATA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATAGCCTTTACTGTTATTaGTGCTGCCATGAACCTTGC +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNSLYCY*CCHEPC
Trigger: GCAAGGTTCATGGCAGCAGCAATAACAGTAAAGGCT...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACCCTCTACTCTTCTCTaGTTGGGAATGGAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEPSTLL*LGMEES
Trigger: AGACTCTTCCATTCCCAAGCAGAGAAGAGTAGAGGG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATCACTGGAAAAGGATTTaGAGTATCTCCGGAAGAACC +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNHWKRI*SISGRT
Trigger: GGTTCTTCCGGAGATACTGCAAATCCTTTTCCAGTG...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCATACCAAGAGAGTTCCTaGATTCATCATAGGGATCTT +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESYQESS*IHHRDL
Trigger: AAGATCCCTATGATGAATGCAGGAACTCTCTTGGTA...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACCTCCTTAAGATGCTTTaGATTTGTCTTACTCTGAAG +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHLLKML*ICLTLK
Trigger: CTTCAGAGTAAGACAAATGCAAAGCATCTTAAGGAG...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATTTCTGATAAATGCTTaGTGGGCCCTCCCACTCCTC +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQFLINA*WALPLL
Trigger: GAGGAGTGGGAGGGCCCAGCAAGCATTTATCAGAAA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAATGGAGACTTGGCATTaGTTCAGTTCTTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQMETWH*FSSWLR
Trigger: GCGCAGCCAAGAACTGAACCAATGCCAAGTCTCCAT...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGAAAGGAAACTTGGATaGCTCAGCTGTACTAGGCGT +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEERKLG*LSCTRR
Trigger: ACGCCTAGTACAGCTGAGCCATCCAAGTTTCCTTTC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATCACCCTTTCTCTTTTTaGCCAACTTGCTTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNHPFSF*PTCLSC
Trigger: ACAGCTCAAGCAAGTTGGCCAAAAAGAGAAAGGGTG...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATATGGAAGAGTCTTTGTaGTTGCTCTTGGTACTGCTG +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNMEESL*LLLVLL
Trigger: CAGCAGTACCAAGAGCAACCACAAAGACTCTTCCAT...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACATGTTCAAAATGGACTaGCAACGCATGCATAAAACA +
Preference number: 4 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHMFKMD*QRMHKT
Trigger: TGTTTTATGCATGCGTTGCCAGTCCATTTTGAACAT...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAATTTCCTTCTGGGAATaGACTAGCGTGGCTACTGAG +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEISFWE*TSVATE
Trigger: CTCAGTAGCCACGCTAGTCCATTCCCAGAAGGAAAT...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAACAAGCCACTGTTCATTaGCAGAAAGTGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQQATVH*QKVGHS
Trigger: ACTGTGCCCCACTTTCTGCCAATGAACAGTGGCTTG...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAAGCACTTTAGCCATCTaGTCAGGTATAAATGTTGGT +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESSTLAI*SGINVG
Trigger: ACCAACATTTATACCTGACCAGATGGCTAAAGTGCT...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATTTGGGTTACAGAACTaGCATGCTGAGAGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEFGLQN*HAESPL
Trigger: CAAAGGACTCTCAGCATGTCAGTTCTGTAACCCAAA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGACAATCAAGGACTCTaGAAGTCTAGTTTTGCTATA +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESDNQGL*KSSFAI
Trigger: TATAGCAAAACTAGACTTTCAGAGTCCTTGATTGTC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATCAAATCAAATCTAGCTaGGAACACTCTGGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNQIKSS*EHSGVK
Trigger: CTTCACTCCAGAGTGTTCTCAGCTAGATTTGATTTG...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGGCACATGGGATTTCTaGTTGTGTTACTTCATTTTA +
Preference number: 4 (lower is better)
Translates to: GINVGSLLPQGRKFRIESGTWDF*LCYFIL
Trigger: TAAAATGAAGTAACACAATCAGAAATCCCATGTGCC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAACAACCCTTCACAATTaGCAGGTGGCTTGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQTTLHN*QVACSR
Trigger: CCTAGAACAAGCCACCTGTCAATTGTGAAGGGTTGT...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAAGCCTTTACTGTTATTaGTGCTGCCATGAACCTTGC +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWESLYCY*CCHEPC
Trigger: GCAAGGTTCATGGCAGCAGCAATAACAGTAAAGGCT...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACATCTCCTCATTTCATTTaGAACTTGTATCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTSPHFI*NLYPAG
Trigger: ACCAGCAGGATACAAGTTGCAAATGAAATGAGGAGA...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATGGCAGGAGCGGGGGTTaGCTTCAATTTTATAAATTA +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNGRSGG*LQFYKL
Trigger: TAATTTATAAAATTGAAGGCAACCCCCGCTCCTGCC...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATCTATTTCTGATAAATaGTTGCTGGGCCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWESISDK*LLGPPT
Trigger: AGTGGGAGGGCCCAGCAAGCATTTATCAGAAATAGA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACATTGGTTCAGTTCTTaGCTGCGCCATCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEHWFSS*LRHLWI
Trigger: AATCCAAAGATGGCGCAGCCAAGAACTGAACCAATG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGAAAGGAAACTTGGATaGCTCAGCTGTACTAGGCGT +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQERKLG*LSCTRR
Trigger: ACGCCTAGTACAGCTGAGCCATCCAAGTTTCCTTTC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAAACTGTCTGAGTCACTaGTGCTTTCTGACTCTGCAC +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQNCLSH*CFLTLH
Trigger: GTGCAGAGTCAGAAAGCACCAGTGACTCAGACAGTT...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACTTTCGTCTTCACCTTaGGCTTGTCTTTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWELSSSP*ACLWKS
Trigger: AGACTTCCAAAGACAAGCCCAAGGTGAAGACGAAAG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAATGGAAGAGTCTTTGTaGTTGCTCTTGGTACTGCTG +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEMEESL*LLLVLL
Trigger: CAGCAGTACCAAGAGCAACCACAAAGACTCTTCCAT...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACAGAGTAAGCTGACTTaGATGACTGGCTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEQSKLT*MTGFQT
Trigger: AGTCTGAAAGCCAGTCATCCAAGTCAGCTTACTCTG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATCGCCATGTTCAAAATaGACTGGCAACGCATGCATA +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWESPCSK*TGNACI
Trigger: TATGCATGCGTTGCCAGTCCATTTTGAACATGGCGA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTCCATTAAGGTGTTTTaGTTAATTCTTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NSELAGQHELPHNCRPQISIKVF*LILVAA
Trigger: AGCAGCTACAAGAATTAACCAAAACACCTTAATGGA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGATGAAACAAATGTCTaGACTGTTTTTGAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFDETNV*TVFEAS
Trigger: GGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAACCACTGCTACTAGGTaGCCAATGTTTTCACAATCC +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWETTATR*PMFSQS
Trigger: GGATTGTGAAAACATTGGCCACCTAGTAGCAGTGGT...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATAAAAGAAATTGCCTCTaGGCTCACTTGAAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNKRNCL*AHLKLS
Trigger: GGACAACTTCAAGTGAGCCCAGAGGCAATTTCTTTT...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000544085.6
CDS-3UTR TCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATGCACACATTTGTGCTaGGCCGAGCAAAGAATTCTT +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQCTHLC*AEQRIL
Trigger: AAGAATTCTTTGCTCGGCTCAGCACAAATGTGTGCA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAAGCTGGATGGAATGCTaGTCCCTTTGTCAGGAATTA +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQSWMEC*SLCQEL
Trigger: TAATTCCTGACAAAGGGAGCAGCATTCCATCCAGCT...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAACTTTACTGTTATTGCTaGTGCCATGAACCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQLYCYC*CHEPCC
Trigger: GCAGCAAGGTTCATGGCAGCAGCAATAACAGTAAAG...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATCCTCATGTGAAGGTCTaGTTGTTGTTTGTCAAACTT +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNPHVKV*LLFVKL
Trigger: AAGTTTGACAAACAACAAGCAGACCTTCACATGAGG...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACATGGACTGGCAACGCATaGATAAAACAGCAAATATTT +
Preference number: 4 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTWTGNA*IKQQIF
Trigger: AAATATTTGCTGTTTTATGCATGCGTTGCCAGTCCA...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGCCATCTTTGGATTGTaGCTAATGTTGCCAACAGAA +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEAIFGL*LMLPTE
Trigger: TTCTGTTGGCAACATTAGCCACAATCCAAAGATGGC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACTACTCTTCTCTGCTTaGGAATGGAAGAGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWELLFSA*EWKSLC
Trigger: ACAAAGACTCTTCCATTCCCAAGCAGAGAAGAGTAG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATGGCAAAGAAGGCACTaGAAAAGGATTTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEWQRRH*KRICSI
Trigger: GATACTGCAAATCCTTTTCCAGTGCCTTCTTTGCCA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATCGCCATGTTCAAAATaGACTGGCAACGCATGCATA +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQSPCSK*TGNACI
Trigger: TATGCATGCGTTGCCAGTCCATTTTGAACATGGCGA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAATGTTTCTTGTTCACTaGCGAAACTCTGAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQMFLVH*RNSELA
Trigger: AGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACAT...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATCTTATGCTCAGATATaGCTACAGCTGTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWESYAQI*LQLSFS
Trigger: AGAGAATGACAGCTGTAGTCATATCTGAGCATAAGA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACCTCATGTGAAGGTCTaGTTGTTGTTTGTCAAACTT +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEPHVKV*LLFVKL
Trigger: AAGTTTGACAAACAACAAGCAGACCTTCACATGAGG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATTGGACTGGCAACGCATaGATAAAACAGCAAATATTT +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNWTGNA*IKQQIF
Trigger: AAATATTTGCTGTTTTATGCATGCGTTGCCAGTCCA...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATTGAGGCTTCCAATGTaGAAAAATAGTTCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQLRLPM*KNSSQG
Trigger: GCCTTGGGAACTATTTTTGCACATTGGAAGCCTCAA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACACATCAAGGTCTTATaGTCAGATATGACTACAGCT +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEHIKVL*SDMTTA
Trigger: AGCTGTAGTCATATCTGAGCATAAGACCTTGATGTG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATCTCCTTAAGATGCTTTaGATTTGTCTTACTCTGAAG +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNLLKML*ICLTLK
Trigger: CTTCAGAGTAAGACAAATGCAAAGCATCTTAAGGAG...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAAAGATTTGGGACACATaGGTGCGTACATACACACAT +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQKIWDT*VRTYTH
Trigger: ATGTGTGTATGTACGCACGCATGTGTCCCAAATCTT...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTATTGTTTTTGGTTTTaGGTTACAGAACTGACATGC +
Preference number: 4 (lower is better)
Translates to: DKGDKCGPICVREIATYFYCFWF*VTELTC
Trigger: GCATGTCAGTTCTGTAACCCAAAACCAAAAACAATA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATGGCAAAGAAGGCACTaGAAAAGGATTTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQWQRRH*KRICSI
Trigger: GATACTGCAAATCCTTTTCCAGTGCCTTCTTTGCCA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATAAAAATCTGTGCTTATaGGCACATGGGATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNKNLCL*AHGISD
Trigger: ATCAGAAATCCCATGTGCCCATAAGCACAGATTTTT...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAAGCAAAAAGACCCTATaGACGTTAAGGATTCATCAG +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQSKKTL*TLRIHQ
Trigger: CTGATGAATCCTTAACGTTCATAGGGTCTTTTTGCT...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAACACATCAAGGTCTTATaGTCAGATATGACTACAGCT +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQHIKVL*SDMTTA
Trigger: AGCTGTAGTCATATCTGAGCATAAGACCTTGATGTG...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATTCCATTAAGGTGTTTTaGTTAATTCTTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNSIKVF*LILVAA
Trigger: AGCAGCTACAAGAATTAACCAAAACACCTTAATGGA...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGATGAAACAAATGTCTaGACTGTTTTTGAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQDETNV*TVFEAS
Trigger: GGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAAGCACTTTAGCCATCTaGTCAGGTATAAATGTTGGT +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQSTLAI*SGINVG
Trigger: ACCAACATTTATACCTGACCAGATGGCTAAAGTGCT...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATTCACAATTGACAGGTaGCTTGTTCTAGGGAATGAT +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQFTIDR*LVLGND
Trigger: ATCATTCCCTAGAACAAGCCACCTGTCAATTGTGAA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR TCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGGCACATGGGATTTCTaGTTGTGTTACTTCATTTTA +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQGTWDF*LCYFIL
Trigger: TAAAATGAAGTAACACAATCAGAAATCCCATGTGCC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CCA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATTTACATATAACAGATaGACACACAATGCTACACAC +
Preference number: 4 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEFTYNR*THNATH
Trigger: GTGTGTAGCATTGTGTGTCCATCTGTTATATGTAAA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR GCA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATTTCACTCCTTAAGATaGTTTGCATTTGTCTTACTC +
Preference number: 4 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQFHSLR*FAFVLL
Trigger: GAGTAAGACAAATGCAAAGCATCTTAAGGAGTGAAA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS GCA 90 bp AGCGCCTCCTCCCGGGGCTCGGCTGCGGAACCGCGGAGGCAAAGGTaGAGCTGCGGCCGCAACGCGCGCAGGCGGCGGCCGAGTGCGCAG +
Preference number: 5 (lower is better)
Translates to: SASSRGSAAEPRRQR*SCGRNARRRRPSAQ
Trigger: CTGCGCACTCGGCCGCCGCCTGCGCGCGTTGCGGCCGCAGCTGCACCTTTGCCTCCGCGGTTCCGCAGCCGAGCCCCGGGAGGAGGCGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395146.9
ENST00000504956.5
ENST00000507468.5
ENST00000674009.1
CDS CCA 90 bp GGTCGGGCGCCCTCGTCACCTCCGCCCTCCCCTGACCTGTTGCGGTaGGAAAGGGCGCAAGTGCGGACGACGCAGGGGAGCGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GRAPSSPPPSPDLLR*ERAQVRTTQGSASS
Trigger: GGAGGAGGCGCTCCCCTGCGTCGTCCGCACTTGCGCCCTTTCCCACCGCAACAGGTCAGGGGAGGGCGGAGGTGACGAGGGCGCCCGACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000511996.5
ENST00000674009.1
CDS TCA 90 bp TCCTCTAGTCCCGGGTCGGGCGCCCTCGTCACCTCCGCCCTCCCCTaGCCTGTTGCGGTGGGAAAGGGCGCAAGTGCGGACGACGCAGGG +
Preference number: 5 (lower is better)
Translates to: SSSPGSGALVTSALP*PVAVGKGASADDAG
Trigger: CCCTGCGTCGTCCGCACTTGCGCCCTTTCCCACCGCAACAGGTCAGGGGAGGGCGGAGGTGACGAGGGCGCCCGACCCGGGACTAGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000511996.5
ENST00000674009.1
CDS CCA 90 bp ACTCGTGGCACTGTCGCTGCTGCCCTTACTCTCTGGGTGCCGCCGTaGGGGCTCTGTGCTCCTGGGGCCCTCTGGTGGCGCAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: TRGTVAAALTLWVPP*GLCAPGALWWRSWL
Trigger: CAGCCAGCTGCGCCACCAGAGGGCCCCAGGAGCACAGAGCCCCCACGGCGGCACCCAGAGAGTAAGGGCAGCAGCGACAGTGCCACGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CCA 90 bp AGAATGCTCCTGACTCGTGGCACTGTCGCTGCTGCCCTTACTCTCTaGGTGCCGCCGTGGGGGCTCTGTGCTCCTGGGGCCCTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: RMLLTRGTVAAALTL*VPPWGLCAPGALWW
Trigger: CCACCAGAGGGCCCCAGGAGCACAGAGCCCCCACGGCGGCACCCAGAGAGTAAGGGCAGCAGCGACAGTGCCACGAGTCAGGAGCATTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS TCA 90 bp TGGGCTGCCATAATTCAGCTTATAGAGCCAGGGGTCTTCCGTCCATaGGCGCCTTCACCCCGCGGGCCCTGCTGCCAGCGCCGCGCTCAC +
Preference number: 5 (lower is better)
Translates to: WAAIIQLIEPGVFRP*APSPRGPCCQRRAH
Trigger: GTGAGCGCGGCGCTGGCAGCAGGGCCCGCGGGGTGAAGGCGCTCATGGACGGAAGACCCCTGGCTCTATAAGCTGAATTATGGCAGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000511722.5
ENST00000544085.6
CDS GCA 90 bp AAGCCAGCGGGCCCCCACGCTCGAAGACCGCCGGCGCCCAACGCCTaGCCAGCAACAGCACAACGCGGGCCACAGTTAGAAAGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: KPAGPHARRPPAPNA*PATAQRGPQLERKR
Trigger: TCTTTTCCTTTCTAACTGTGGCCCGCGTTGTGCTGTTGCTGGGCAGGCGTTGGGCGCCGGCGGTCTTCGAGCGTGGGGGCCCGCTGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS CCA 90 bp ACCACGGCTTGGCGGCAGCCACTAGTCCTGCTGCCGCTGCCACTGTaGGGTGGGCCCTGGCTCTCAGTCAGGGGAACAAGAGCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: TTAWRQPLVLLPLPL*GGPWLSVRGTRAKC
Trigger: GCACTTTGCTCTTGTTCCCCTGACTGAGAGCCAGGGCCCACCCCACAGTGGCAGCGGCAGCAGGACTAGTGGCTGCCGCCAAGCCGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503369.1
ENST00000544085.6
ENST00000674009.1
CDS CCA 90 bp AATGGGAGTCTGTCTTTGCGGCTGTCCTCCTGGACCACCACGGCTTaGCGGCAGCCACTAGTCCTGCTGCCGCTGCCACTGTGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: NGSLSLRLSSWTTTA*RQPLVLLPLPLWGG
Trigger: CCCACCCCACAGTGGCAGCGGCAGCAGGACTAGTGGCTGCCGCCAAGCCGTGGTGGTCCAGGAGGACAGCCGCAAAGACAGACTCCCATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503369.1
ENST00000544085.6
ENST00000674009.1
CDS CCA 90 bp CTGCGGCCCGGGGCCGTCCTTTCGTCTTCACCTTGGGCTTGTCTTTaGAAGTCTGGTCTCGGGAGCCATAGGGAAGAAGCCCTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: LRPGAVLSSSPWACL*KSGLGSHREEALAP
Trigger: GGGAGCCAGGGCTTCTTCCCTATGGCTCCCGAGACCAGACTTCCAAAGACAAGCCCAAGGTGAAGACGAAAGGACGGCCCCGGGCCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CCA 90 bp CTGTGCTTCTTCCCTGCGGGCGGCTGTTTATCTTCTGCTTTCCTCTaGCGGCTCCCCTTCCCGGGAGGCTGGGGTATCCGAGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: LCFFPAGGCLSSAFL*RLPFPGGWGIRESR
Trigger: CCTGCTCTCTCGGATACCCCAGCCTCCCGGGAAGGGGAGCCGCCAGAGGAAAGCAGAAGATAAACAGCCGCCCGCAGGGAAGAAGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503369.1
ENST00000544085.6
ENST00000674009.1
CDS TCA 90 bp ACGGGGCTCCCAGGCAGTTGGTACCACAGCTGCCGCTGCCTGGCATaGGAACTCGGGCCGAGACCAGAGGGAACCACCGCATTAAAGGAA +
Preference number: 5 (lower is better)
Translates to: TGLPGSWYHSCRCLA*ELGPRPEGTTALKE
Trigger: TTCCTTTAATGCGGTGGTTCCCTCTGGTCTCGGCCCGAGTTCTCATGCCAGGCAGCGGCAGCTGTGGTACCAACTGCCTGGGAGCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514970.2
CDS GCA 90 bp CTTGAAGTTGTCCGAGTCCGCCGGGATACCCCCTGTCAAGAAAGTTaGGGTGGTACGGCCCGCCTACTTAAATGGGCAGGGCGCTCGGCG +
Preference number: 5 (lower is better)
Translates to: LEVVRVRRDTPCQES*GGTARLLKWAGRSA
Trigger: CGCCGAGCGCCCTGCCCATTTAAGTAGGCGGGCCGTACCACCGCAACTTTCTTGACAGGGGGTATCCCGGCGGACTCGGACAACTTCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544085.6
CDS CCA 90 bp GTGTCTCTCAAAGGCAATGGGAGTCTGTCTTTGCGGCTGTCCTCCTaGACCACCACGGCTTGGCGGCAGCCACTAGTCCTGCTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: VSLKGNGSLSLRLSS*TTTAWRQPLVLLPL
Trigger: CAGCGGCAGCAGGACTAGTGGCTGCCGCCAAGCCGTGGTGGTCCAGGAGGACAGCCGCAAAGACAGACTCCCATTGCCTTTGAGAGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503369.1
ENST00000544085.6
ENST00000674009.1
CDS CCA 90 bp GGCGATCCTGGGTCAGGTGCTGGCTGTCCGGTGGGCCGCAGCTTTTaGCATGGAGACTTGGCATTGGTTCAGTTCTTGGCTGCGCCATCT +
Preference number: 5 (lower is better)
Translates to: GDPGSGAGCPVGRSF*HGDLALVQFLAAPS
Trigger: AGATGGCGCAGCCAAGAACTGAACCAATGCCAAGTCTCCATGCCAAAAGCTGCGGCCCACCGGACAGCCAGCACCTGACCCAGGATCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CCA 90 bp CCCCTCCTGACCAAGGCGATCCTGGGTCAGGTGCTGGCTGTCCGGTaGGCCGCAGCTTTTGGCATGGAGACTTGGCATTGGTTCAGTTCT +
Preference number: 5 (lower is better)
Translates to: PLLTKAILGQVLAVR*AAAFGMETWHWFSS
Trigger: AGAACTGAACCAATGCCAAGTCTCCATGCCAAAAGCTGCGGCCCACCGGACAGCCAGCACCTGACCCAGGATCGCCTTGGTCAGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CCA 90 bp GTTCGTTGCTTGCTGCGGCCCGGGGCCGTCCTTTCGTCTTCACCTTaGGCTTGTCTTTGGAAGTCTGGTCTCGGGAGCCATAGGGAAGAA +
Preference number: 5 (lower is better)
Translates to: VRCLLRPGAVLSSSP*ACLWKSGLGSHREE
Trigger: TTCTTCCCTATGGCTCCCGAGACCAGACTTCCAAAGACAAGCCCAAGGTGAAGACGAAAGGACGGCCCCGGGCCGCAGCAAGCAACGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CCA 90 bp TCTTTGTGGTTGCTCTTGGTACTGCTGGCACTTTTGGGAGGGTCCTaGCCACAGGTGTCTGCTTCCCGCCTTGACCTCTTAAGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: SLWLLLVLLALLGGS*PQVSASRLDLLSAG
Trigger: GCCTGCACTTAAGAGGTCAAGGCGGGAAGCAGACACCTGTGGCCAGGACCCTCCCAAAAGTGCCAGCAGTACCAAGAGCAACCACAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CCA 90 bp GAATGGAAGAGTCTTTGTGGTTGCTCTTGGTACTGCTGGCACTTTTaGGAGGGTCCTGGCCACAGGTGTCTGCTTCCCGCCTTGACCTCT +
Preference number: 5 (lower is better)
Translates to: EWKSLCGCSWYCWHF*EGPGHRCLLPALTS
Trigger: AGAGGTCAAGGCGGGAAGCAGACACCTGTGGCCAGGACCCTCCCAAAAGTGCCAGCAGTACCAAGAGCAACCACAAAGACTCTTCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CCA 90 bp GGATGTGATGGTGACATAGGAAGATGTCATATTCTGGATGGTGACTaGGGTGCTGATAGTGGCAGCCACCCCACTGCTCCCCACACTGCC +
Preference number: 5 (lower is better)
Translates to: GCDGDIGRCHILDGD*GADSGSHPTAPHTA
Trigger: GGCAGTGTGGGGAGCAGTGGGGTGGCTGCCACTATCAGCACCCCAGTCACCATCCAGAATATGACATCTTCCTATGTCACCATCACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
CDS CCA 90 bp ACAGCACAACGCGGGCCACAGTTAGAAAGGAAAAGAAATTGCCTCTaGGCTCACTTGAAGTTGTCCGAGTCCGCCGGGATACCCCCTGTC +
Preference number: 5 (lower is better)
Translates to: TAQRGPQLERKRNCL*AHLKLSESAGIPPV
Trigger: GACAGGGGGTATCCCGGCGGACTCGGACAACTTCAAGTGAGCCCAGAGGCAATTTCTTTTCCTTTCTAACTGTGGCCCGCGTTGTGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544085.6
CDS-3UTR CAA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGCTTGGGTTCGTTGCTaGCTGCGGCCCGGGGCCGTC +
Preference number: 5 (lower is better)
Translates to: NSELAGQHELPHNCRPQIAWVRC*LRPGAV
Trigger: GACGGCCCCGGGCCGCAGCAAGCAACGAACCCAAGC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGCTGGCTTGGGTTCGTaGCTTGCTGCGGCCCGGGGC +
Preference number: 5 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHAGLGS*LAAARG
Trigger: GCCCCGGGCCGCAGCAAGCAACGAACCCAAGCCAGC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGGGGGCACTGCTGGCTaGGGTTCGTTGCTTGCTGCG +
Preference number: 5 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRGGTAG*GSLLAA
Trigger: CGCAGCAAGCAACGAACCCAAGCCAGCAGTGCCCCC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS GCA 90 bp TTGGCCAACTTGCTTGAGCTGTCTGAGCTCCTCTTCTCAGAGCTGTaGTTCTTCCCTGCGGGCGGCTGTTTATCTTCTGCTTTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: LANLLELSELLFSEL*FFPAGGCLSSAFLW
Trigger: CCAGAGGAAAGCAGAAGATAAACAGCCGCCCGCAGGGAAGAAGCACAGCTCTGAGAAGAGGAGCTCAGACAGCTCAAGCAAGTTGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503369.1
ENST00000544085.6
ENST00000674009.1
CDS CCA 90 bp CTGGCTGTCCGGTGGGCCGCAGCTTTTGGCATGGAGACTTGGCATTaGTTCAGTTCTTGGCTGCGCCATCTTTGGATTGTGGCTAATGTT +
Preference number: 5 (lower is better)
Translates to: LAVRWAAAFGMETWH*FSSWLRHLWIVANV
Trigger: AACATTAGCCACAATCCAAAGATGGCGCAGCCAAGAACTGAACCAATGCCAAGTCTCCATGCCAAAAGCTGCGGCCCACCGGACAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CCA 90 bp CCCTTCCCCTCTACTCTTCTCTGCTTGGGAATGGAAGAGTCTTTGTaGTTGCTCTTGGTACTGCTGGCACTTTTGGGAGGGTCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: PFPSTLLCLGMEESL*LLLVLLALLGGSWP
Trigger: TGGCCAGGACCCTCCCAAAAGTGCCAGCAGTACCAAGAGCAACCACAAAGACTCTTCCATTCCCAAGCAGAGAAGAGTAGAGGGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS-3UTR CAA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATCGCCGCGCTCACCATTaGGCGGAGCCGGGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNRRAHH*AEPGGD
Trigger: GTCCCCGCCCGGCTCCGCCAAATGGTGAGCGCGGCG...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGCCACACTGCCAGCACTaGACTGGGACCCTACGGAGC +
Preference number: 5 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRPHCQH*TGTLRS
Trigger: GCTCCGTAGGGTCCCAGTCAAGTGCTGGCAGTGTGG...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS GCA 90 bp CTAGGTCCTTGGGAGATTTGGCTGGGCAATAGCCTTTACTGTTATTaGTGCTGCCATGAACCTTGCTGCTTCCTTGCGTCCGGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: LGPWEIWLGNSLYCY*CCHEPCCFLASGEE
Trigger: CTCTTCCCCGGACGCAAGGAAGCAGCAAGGTTCATGGCAGCAGCAATAACAGTAAAGGCTATTGCCCAGCCAAATCTCCCAAGGACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS GCA 90 bp AGTCTGAGGAACTGTCTGAGTCACTGGTGCTTTCTGACTCTGCACTaGTGGAATGTGCTGATGCCACTGGTTCTGGAAGGGACTGTGGAG +
Preference number: 5 (lower is better)
Translates to: SLRNCLSHWCFLTLH*WNVLMPLVLEGTVE
Trigger: CTCCACAGTCCCTTCCAGAACCAGTGGCATCAGCACATTCCAGCAGTGCAGAGTCAGAAAGCACCAGTGACTCAGACAGTTCCTCAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000511722.5
ENST00000514970.2
ENST00000544085.6
ENST00000674009.1
CDS GCA 90 bp TTGTGCTCCGAGGAGCTTCTGGAGCCCTTCCCCTCTACTCTTCTCTaGTTGGGAATGGAAGAGTCTTTGTGGTTGCTCTTGGTACTGCTG +
Preference number: 5 (lower is better)
Translates to: LCSEELLEPFPSTLL*LGMEESLWLLLVLL
Trigger: CAGCAGTACCAAGAGCAACCACAAAGACTCTTCCATTCCCAAGCAGAGAAGAGTAGAGGGGAAGGGCTCCAGAAGCTCCTCGGAGCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS-3UTR CAA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACGCCGCGCTCACCATTaGGCGGAGCCGGGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: YNLALSNDLPQYRFCLWERRAHH*AEPGGD
Trigger: GTCCCCGCCCGGCTCCGCCAAATGGTGAGCGCGGCG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGTCCAACGGTTTGCCTTaGTGGGGGCTCCTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRSNGLP*WGLLLC
Trigger: GCACAGCAGGAGCCCCCACAAAGGCAAACCGTTGGA...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGCTTGGGTTCGTTGCTaGCTGCGGCCCGGGGCCGTC +
Preference number: 5 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTAWVRC*LRPGAV
Trigger: GACGGCCCCGGGCCGCAGCAAGCAACGAACCCAAGC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACCTGGACCACCACGGCTaGGCGGCAGCCACTAGTCCT +
Preference number: 5 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHLDHHG*AAATSP
Trigger: AGGACTAGTGGCTGCCGCCAAGCCGTGGTGGTCCAG...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS GCA 90 bp CCTTGGGAGATTTGGCTGGGCAATAGCCTTTACTGTTATTGCTGCTaGCATGAACCTTGCTGCTTCCTTGCGTCCGGGGAAGAGTTTGCT +
Preference number: 5 (lower is better)
Translates to: PWEIWLGNSLYCYCC*HEPCCFLASGEEFA
Trigger: AGCAAACTCTTCCCCGGACGCAAGGAAGCAGCAAGGTTCATGGCAGCAGCAATAACAGTAAAGGCTATTGCCCAGCCAAATCTCCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS GCA 90 bp GGTCCTTGGGAGATTTGGCTGGGCAATAGCCTTTACTGTTATTGCTaGTGCCATGAACCTTGCTGCTTCCTTGCGTCCGGGGAAGAGTTT +
Preference number: 5 (lower is better)
Translates to: GPWEIWLGNSLYCYC*CHEPCCFLASGEEF
Trigger: AAACTCTTCCCCGGACGCAAGGAAGCAGCAAGGTTCATGGCAGCAGCAATAACAGTAAAGGCTATTGCCCAGCCAAATCTCCCAAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CCA 90 bp TGGCTGCGCCATCTTTGGATTGTGGCTAATGTTGCCAACAGAAAGTaGTCCAGACGCAGGAGTGTGAATGGACTGGTGGTGGACACTAGT +
Preference number: 5 (lower is better)
Translates to: WLRHLWIVANVANRK*SRRRSVNGLVVDTS
Trigger: ACTAGTGTCCACCACCAGTCCATTCACACTCCTGCGTCTGGACCACTTTCTGTTGGCAACATTAGCCACAATCCAAAGATGGCGCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CCA 90 bp TTGAACTGCTCTCGCTCTCTGAGTCTGAGGAACTGTCTGAGTCACTaGTGCTTTCTGACTCTGCACTGCTGGAATGTGCTGATGCCACTG +
Preference number: 5 (lower is better)
Translates to: LNCSRSLSLRNCLSH*CFLTLHCWNVLMPL
Trigger: CAGTGGCATCAGCACATTCCAGCAGTGCAGAGTCAGAAAGCACCAGTGACTCAGACAGTTCCTCAGACTCAGAGAGCGAGAGCAGTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000511722.5
ENST00000514970.2
ENST00000544085.6
ENST00000674009.1
CDS-3UTR CAA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGGGGGCACTGCTGGCTaGGGTTCGTTGCTTGCTGCG +
Preference number: 5 (lower is better)
Translates to: GINVGSLLPQGRKFRIESGGTAG*GSLLAA
Trigger: CGCAGCAAGCAACGAACCCAAGCCAGCAGTGCCCCC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCACTGGACCACCACGGCTaGGCGGCAGCCACTAGTCCT +
Preference number: 5 (lower is better)
Translates to: GINVGSLLPQGRKFRIESLDHHG*AAATSP
Trigger: AGGACTAGTGGCTGCCGCCAAGCCGTGGTGGTCCAG...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAATGGGAGTCTGTCTTaGCGGCTGTCCTCCTGGACC +
Preference number: 5 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRNGSLS*RLSSWT
Trigger: GGTCCAGGAGGACAGCCGCAAAGACAGACTCCCATT...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCCCCCTGTCAAGAAAGTaGCGGTGGTACGGCCCGCCT +
Preference number: 5 (lower is better)
Translates to: NSELAGQHELPHNCRPQIPLSRK*RWYGPP
Trigger: AGGCGGGCCGTACCACCGCAACTTTCTTGACAGGGG...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544085.6
CDS GCA 90 bp TGGCTGGGCAATAGCCTTTACTGTTATTGCTGCTGCCATGAACCTTaGTGCTTCCTTGCGTCCGGGGAAGAGTTTGCTGGTTGGAATGTA +
Preference number: 5 (lower is better)
Translates to: WLGNSLYCYCCCHEP*CFLASGEEFAGWNV
Trigger: TACATTCCAACCAGCAAACTCTTCCCCGGACGCAAGGAAGCAGCAAGGTTCATGGCAGCAGCAATAACAGTAAAGGCTATTGCCCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CCA 90 bp TGGGCCGCAGCTTTTGGCATGGAGACTTGGCATTGGTTCAGTTCTTaGCTGCGCCATCTTTGGATTGTGGCTAATGTTGCCAACAGAAAG +
Preference number: 5 (lower is better)
Translates to: WAAAFGMETWHWFSS*LRHLWIVANVANRK
Trigger: CTTTCTGTTGGCAACATTAGCCACAATCCAAAGATGGCGCAGCCAAGAACTGAACCAATGCCAAGTCTCCATGCCAAAAGCTGCGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS-3UTR CAA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGCTGCCATTTGTTTGTaGTTGGAGGCTCAGGCTCCG +
Preference number: 5 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRAAICL*LEAQAP
Trigger: CGGAGCCTGAGCCTCCAACAACAAACAAATGGCAGC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGCTGGCTGGCTGACTTaGGTCAGCCAGTTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: NSELAGQHELPHNCRPQIAGWLT*VSQLSS
Trigger: GCTGGACAACTGGCTGACCAAAGTCAGCCAGCCAGC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTGCCTCTGGGCTCACTaGAAGTTGTCCGAGTCCGCC +
Preference number: 5 (lower is better)
Translates to: NSELAGQHELPHNCRPQICLWAH*KLSESA
Trigger: GGCGGACTCGGACAACTTCAAGTGAGCCCAGAGGCA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544085.6
CDS GCA 90 bp CCGCAGCTTTTGGCATGGAGACTTGGCATTGGTTCAGTTCTTGGCTaGGCCATCTTTGGATTGTGGCTAATGTTGCCAACAGAAAGTGGT +
Preference number: 5 (lower is better)
Translates to: PQLLAWRLGIGSVLG*AIFGLWLMLPTESG
Trigger: ACCACTTTCTGTTGGCAACATTAGCCACAATCCAAAGATGGCGCAGCCAAGAACTGAACCAATGCCAAGTCTCCATGCCAAAAGCTGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS-3UTR CAA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTCGGGCTCGGCCCGTATaGGCTCGCGCTAATCCTGAT +
Preference number: 5 (lower is better)
Translates to: DKGDKCGPICVREIATYFRARPV*ARANPD
Trigger: ATCAGGATTAGCGCGAGCCAATACGGGCCGAGCCCG...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGTGGTGGGCTTCCTGGTaGCGTCTTTCCTTCTCTCTA +
Preference number: 5 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRWWASW*RLSFSL
Trigger: TAGAGAGAAGGAAAGACGCAACCAGGAAGCCCACCA...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGGTGGGCCGCAGCTTTaGGCATGGAGACTTGGCATT +
Preference number: 5 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHGGPQL*AWRLGI
Trigger: AATGCCAAGTCTCCATGCCAAAAGCTGCGGCCCACC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGCGTCCGGGGAAGAGTTaGCTGGTTGGAATGTATAGG +
Preference number: 5 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRRPGKS*LVGMYR
Trigger: CCTATACATTCCAACCAGCAAACTCTTCCCCGGACG...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGCTGGCTTGGGTTCGTaGCTTGCTGCGGCCCGGGGC +
Preference number: 5 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQAGLGS*LAAARG
Trigger: GCCCCGGGCCGCAGCAAGCAACGAACCCAAGCCAGC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGTCCTGTCCTCCACATaGTCCTTCGCGGGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: GINVGSLLPQGRKFRIESVLSST*SFAGSG
Trigger: CCCAGAACCCGCGAAGGACAATGTGGAGGACAGGAC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTGGGCTCACTTGAAGTaGTCCGAGTCCGCCGGGATA +
Preference number: 5 (lower is better)
Translates to: NSELAGQHELPHNCRPQIWAHLK*SESAGI
Trigger: TATCCCGGCGGACTCGGACAACTTCAAGTGAGCCCA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544085.6
CDS-3UTR CAA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGACAGCTCATCACCTTTaGCTGTCTTGTAGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRTAHHL*LSCRAL
Trigger: GAGAGCCCTACAAGACAGCAAAAGGTGATGAGCTGT...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCAACCTTGCTGCTTCCTaGCGTCCGGGGAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: NSELAGQHELPHNCRPQINLAAS*RPGKSL
Trigger: CAAACTCTTCCCCGGACGCAAGGAAGCAGCAAGGTT...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGCATTGCAACACTTTTaGAGGGGAGGGAGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHALQHF*RGGREV
Trigger: CACCTCCCTCCCTCCCCTCAAAAAGTGTTGCAATGC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGCTGGCTGGCTGACTTaGGTCAGCCAGTTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: DKGDKCGPICVREIATYFAGWLT*VSQLSS
Trigger: GCTGGACAACTGGCTGACCAAAGTCAGCCAGCCAGC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTCCAACGGTTTGCCTTaGTGGGGGCTCCTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: DKGDKCGPICVREIATYFSNGLP*WGLLLC
Trigger: GCACAGCAGGAGCCCCCACAAAGGCAAACCGTTGGA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACACCTTGGGCTTGTCTTaGGAAGTCTGGTCTCGGGAG +
Preference number: 5 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHTLGLS*EVWSRE
Trigger: CTCCCGAGACCAGACTTCCAAAGACAAGCCCAAGGT...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGCCTTTCGTCTTCACCTaGGGCTTGTCTTTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRPFVFT*GLSLEV
Trigger: GACTTCCAAAGACAAGCCCAAGGTGAAGACGAAAGG...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGTCCTGTCCTCCACATaGTCCTTCGCGGGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: DKGDKCGPICVREIATYFVLSST*SFAGSG
Trigger: CCCAGAACCCGCGAAGGACAATGTGGAGGACAGGAC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAAATGGGAGTCTGTCTTaGCGGCTGTCCTCCTGGACC +
Preference number: 5 (lower is better)
Translates to: GINVGSLLPQGRKFRIESNGSLS*RLSSWT
Trigger: GGTCCAGGAGGACAGCCGCAAAGACAGACTCCCATT...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGAAGAGTCTTTGTGGTaGCTCTTGGTACTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: TLAIWSGINVGSLLPQGREESLW*LLVLLA
Trigger: TGCCAGCAGTACCAAGAGCAACCACAAAGACTCTTC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCAGGGAGCACTGTGGCTaGCCAACAGAACACGCACAT +
Preference number: 5 (lower is better)
Translates to: NSELAGQHELPHNCRPQIREHCG*PTEHAH
Trigger: ATGTGCGTGTTCTGTTGGCAAGCCACAGTGCTCCCT...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS CCA 90 bp AGGGGAATCTTTTCAGGAAATGCCTCTTTCTCTTGGTGGGCTTCCTaGTTGCGTCTTTCCTTCTCTCTAATTCGAAGCAGGTTTCTGTCG +
Preference number: 5 (lower is better)
Translates to: RGIFSGNASFSWWAS*LRLSFSLIRSRFLS
Trigger: CGACAGAAACCTGCTTCGAATTAGAGAGAAGGAAAGACGCAACCAGGAAGCCCACCAAGAGAAAGAGGCATTTCCTGAAAAGATTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000507468.5
ENST00000511442.1
ENST00000544085.6
ENST00000674009.1
CDS CCA 90 bp GGGTCTCTTTATCATGGACTTTCACTGCTAGGTCCTTGGGAGATTTaGCTGGGCAATAGCCTTTACTGTTATTGCTGCTGCCATGAACCT +
Preference number: 5 (lower is better)
Translates to: GSLYHGLSLLGPWEI*LGNSLYCYCCCHEP
Trigger: AGGTTCATGGCAGCAGCAATAACAGTAAAGGCTATTGCCCAGCCAAATCTCCCAAGGACCTAGCAGTGAAAGTCCATGATAAAGAGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CCA 90 bp TGTCTTGAGGGGTCTCTTTATCATGGACTTTCACTGCTAGGTCCTTaGGAGATTTGGCTGGGCAATAGCCTTTACTGTTATTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CLEGSLYHGLSLLGP*EIWLGNSLYCYCCC
Trigger: GCAGCAGCAATAACAGTAAAGGCTATTGCCCAGCCAAATCTCCCAAGGACCTAGCAGTGAAAGTCCATGATAAAGAGACCCCTCAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CCA 90 bp TTGAGGCTTCCCTGGTTTAGAGTTACCATTTGGCAAAGAAGGCACTaGAAAAGGATTTGCAGTATCTCCGGAAGAACCCTTGTGCTCCGA +
Preference number: 5 (lower is better)
Translates to: LRLPWFRVTIWQRRH*KRICSISGRTLVLR
Trigger: TCGGAGCACAAGGGTTCTTCCGGAGATACTGCAAATCCTTTTCCAGTGCCTTCTTTGCCAAATGGTAACTCTAAACCAGGGAAGCCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS-3UTR CAA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTGGTGGGCTTCCTGGTaGCGTCTTTCCTTCTCTCTA +
Preference number: 5 (lower is better)
Translates to: NSELAGQHELPHNCRPQIWWASW*RLSFSL
Trigger: TAGAGAGAAGGAAAGACGCAACCAGGAAGCCCACCA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACAAATGCCTCTTTCTCTaGGTGGGCTTCCTGGTTGCG +
Preference number: 5 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHKCLFL*VGFLVA
Trigger: CGCAACCAGGAAGCCCACCAAGAGAAAGAGGCATTT...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGGATTGTGGCTAATGTaGCCAACAGAAAGTGGTCCA +
Preference number: 5 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRGLWLM*PTESGP
Trigger: TGGACCACTTTCTGTTGGCAACATTAGCCACAATCC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCAGGCTTCTCTGGGGTTaGTTCACTGTCACTGTCCTC +
Preference number: 5 (lower is better)
Translates to: NSELAGQHELPHNCRPQIRLLWG*FTVTVL
Trigger: GAGGACAGTGACAGTGAACAAACCCCAGAGAAGCCT...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATGGGACTGTGGAGCACTaGGAGGTGCAGATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNGTVEH*EVQMRR
Trigger: CCTCCTCATCTGCACCTCCAAGTGCTCCACAGTCCC...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCATTTGGTTCCAACGGTTaGCCTTTGTGGGGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: GINVGSLLPQGRKFRIESFGSNG*PLWGLL
Trigger: CAGGAGCCCCCACAAAGGCAAACCGTTGGAACCAAA...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGTCACCCTTTCTCTTTTaGGCCAACTTGCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRSPFLF*ANLLEL
Trigger: CAGCTCAAGCAAGTTGGCCAAAAAGAGAAAGGGTGA...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGTCTTTGTGGTTGCTCTaGGTACTGCTGGCACTTTTG +
Preference number: 5 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRSLWLL*VLLALL
Trigger: CAAAAGTGCCAGCAGTACCAAGAGCAACCACAAAGA...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAGGTGCCTGGGCGACTTaGGAAGAACTCTCGAAGTGT +
Preference number: 5 (lower is better)
Translates to: GINVGSLLPQGRKFRIESGAWAT*EELSKC
Trigger: ACACTTCGAGAGTTCTTCCAAAGTCGCCCAGGCACC...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCATCCACCAAACTGCTGTaGAGGGCCAAGGTGCACACA +
Preference number: 5 (lower is better)
Translates to: GINVGSLLPQGRKFRIESSTKLL*RAKVHT
Trigger: TGTGTGCACCTTGGCCCTCAACAGCAGTTTGGTGGA...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACTCAAGCCACTGTTCATaGGCAGAAAGTGGGGCACAG +
Preference number: 5 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHSSHCS*AESGAQ
Trigger: CTGTGCCCCACTTTCTGCCAATGAACAGTGGCTTGA...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAAGGGAGCACTGTGGCTaGCCAACAGAACACGCACAT +
Preference number: 5 (lower is better)
Translates to: GINVGSLLPQGRKFRIESREHCG*PTEHAH
Trigger: ATGTGCGTGTTCTGTTGGCAAGCCACAGTGCTCCCT...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAAAATGCCTCTTTCTCTaGGTGGGCTTCCTGGTTGCG +
Preference number: 5 (lower is better)
Translates to: GINVGSLLPQGRKFRIESKCLFL*VGFLVA
Trigger: CGCAACCAGGAAGCCCACCAAGAGAAAGAGGCATTT...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGCATTGGTTCAGTTCTaGGCTGCGCCATCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: NSELAGQHELPHNCRPQIALVQF*AAPSLD
Trigger: ATCCAAAGATGGCGCAGCCAAGAACTGAACCAATGC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCACATGGAGACTTGGCATaGGTTCAGTTCTTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: GINVGSLLPQGRKFRIESHGDLA*VQFLAA
Trigger: CGCAGCCAAGAACTGAACCAATGCCAAGTCTCCATG...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTTGGTGAGCTTGGCTTaGGCAGGCACTTTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: NSELAGQHELPHNCRPQILVSLA*AGTFKS
Trigger: AGACTTGAAAGTGCCTGCCAAAGCCAAGCTCACCAA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTTCAGTTTGGTGAGCTaGGCTTTGGCAGGCACTTTC +
Preference number: 5 (lower is better)
Translates to: NSELAGQHELPHNCRPQIFSLVS*ALAGTF
Trigger: GAAAGTGCCTGCCAAAGCCAAGCTCACCAAACTGAA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGGGACTGTGGAGCACTaGGAGGTGCAGATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEGTVEH*EVQMRR
Trigger: CCTCCTCATCTGCACCTCCAAGTGCTCCACAGTCCC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACATTTGGTTCCAACGGTTaGCCTTTGTGGGGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTFGSNG*PLWGLL
Trigger: CAGGAGCCCCCACAAAGGCAAACCGTTGGAACCAAA...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTACCTTGGGCTTGTCTTaGGAAGTCTGGTCTCGGGAG +
Preference number: 5 (lower is better)
Translates to: DKGDKCGPICVREIATYFTLGLS*EVWSRE
Trigger: CTCCCGAGACCAGACTTCCAAAGACAAGCCCAAGGT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACCTCTTTTTGGCCAACTaGCTTGAGCTGTCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHLFLAN*LELSEL
Trigger: GAGCTCAGACAGCTCAAGCAAGTTGGCCAAAAAGAG...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGGAGCATTTCCTTCTTaGAGGACTGTGAGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTGAFPS*RTVRRA
Trigger: GGCCCTCCTCACAGTCCTCAAAGAAGGAAATGCTCC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGAAGAGTCTTTGTGGTaGCTCTTGGTACTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: NSELAGQHELPHNCRPQIEESLW*LLVLLA
Trigger: TGCCAGCAGTACCAAGAGCAACCACAAAGACTCTTC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGATATTTTCTCTTGTGTaGGCGCTGTGGCATCTGAGA +
Preference number: 5 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRIFSLV*ALWHLR
Trigger: TCTCAGATGCCACAGCGCCAACACAAGAGAAAATAT...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGGTGCCTGGGCGACTTaGGAAGAACTCTCGAAGTGT +
Preference number: 5 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTGAWAT*EELSKC
Trigger: ACACTTCGAGAGTTCTTCCAAAGTCGCCCAGGCACC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCATAGTTCCCAAGGCATaGAATCAACCTGGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: NSELAGQHELPHNCRPQIIVPKA*NQPGAP
Trigger: TGGAGCCCCAGGTTGATTCAATGCCTTGGGAACTAT...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGGAATGCTGCTCCCTTaGTCAGGAATTAAAGGATAT +
Preference number: 5 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRGMLLP*SGIKGY
Trigger: ATATCCTTTAATTCCTGACAAAGGGAGCAGCATTCC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACTGCGCCATCTTTGGATaGTGGCTAATGTTGCCAACA +
Preference number: 5 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHCAIFG*WLMLPT
Trigger: TGTTGGCAACATTAGCCACAATCCAAAGATGGCGCA...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACACATGGAGACTTGGCATaGGTTCAGTTCTTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTHGDLA*VQFLAA
Trigger: CGCAGCCAAGAACTGAACCAATGCCAAGTCTCCATG...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGGTGGGCCGCAGCTTTaGGCATGGAGACTTGGCATT +
Preference number: 5 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEGGPQL*AWRLGI
Trigger: AATGCCAAGTCTCCATGCCAAAAGCTGCGGCCCACC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGGGAAGAGTTTGCTGGTaGGAATGTATAGGTGACAAA +
Preference number: 5 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRGRVCW*ECIGDK
Trigger: TTTGTCACCTATACATTCCAACCAGCAAACTCTTCC...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATAACCTTGCTGCTTCCTaGCGTCCGGGGAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNNLAAS*RPGKSL
Trigger: CAAACTCTTCCCCGGACGCAAGGAAGCAGCAAGGTT...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTTCACTGCTAGGTCCTaGGGAGATTTGGCTGGGCAA +
Preference number: 5 (lower is better)
Translates to: DKGDKCGPICVREIATYFFTARS*GDLAGQ
Trigger: TTGCCCAGCCAAATCTCCCAAGGACCTAGCAGTGAA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCATTCAGTTTGGTGAGCTaGGCTTTGGCAGGCACTTTC +
Preference number: 5 (lower is better)
Translates to: GINVGSLLPQGRKFRIESFSLVS*ALAGTF
Trigger: GAAAGTGCCTGCCAAAGCCAAGCTCACCAAACTGAA...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCATTTCTTCGCTGTCACTaGAACTGCTCTCGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: GINVGSLLPQGRKFRIESFLRCH*NCSRSL
Trigger: CAGAGAGCGAGAGCAGTTCAAGTGACAGCGAAGAAA...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATGCTGCCATTTGTTTGTaGTTGGAGGCTCAGGCTCCG +
Preference number: 5 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNAAICL*LEAQAP
Trigger: CGGAGCCTGAGCCTCCAACAACAAACAAATGGCAGC...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCACTCTTTTTGGCCAACTaGCTTGAGCTGTCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: GINVGSLLPQGRKFRIESLFLAN*LELSEL
Trigger: GAGCTCAGACAGCTCAAGCAAGTTGGCCAAAAAGAG...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCGCACTGGAAAAGGATTaGCAGTATCTCCGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: NSELAGQHELPHNCRPQIALEKD*QYLRKN
Trigger: GTTCTTCCGGAGATACTGCAAATCCTTTTCCAGTGC...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATTCCACCAAACTGCTGTaGAGGGCCAAGGTGCACACA +
Preference number: 5 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNSTKLL*RAKVHT
Trigger: TGTGTGCACCTTGGCCCTCAACAGCAGTTTGGTGGA...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGCCTGATTCTGGTGCCTaGTCCTTTACATATAACAGA +
Preference number: 5 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRPDSGA*SFTYNR
Trigger: TCTGTTATATGTAAAGGACAAGGCACCAGAATCAGG...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp ACTTTAGCCATCTGGTCAGGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGACCTCAGTACAGATTTaGCCTTTGGGAATTGTAAGC +
Preference number: 5 (lower is better)
Translates to: TLAIWSGINVGSLLPQGRTSVQI*PLGIVS
Trigger: GCTTACAATTCCCAAAGGCAAAATCTGTACTGAGGT...CCTCCCTTGGGGAAGAAGGGAACCAACATTTATACCTGACCAGATGGCTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGCATTGGTTCAGTTCTaGGCTGCGCCATCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: DKGDKCGPICVREIATYFALVQF*AAPSLD
Trigger: ATCCAAAGATGGCGCAGCCAAGAACTGAACCAATGC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATTTCACTGCTAGGTCCTaGGGAGATTTGGCTGGGCAA +
Preference number: 5 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNFTARS*GDLAGQ
Trigger: TTGCCCAGCCAAATCTCCCAAGGACCTAGCAGTGAA...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGCATTGCAACACTTTTaGAGGGGAGGGAGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEALQHF*RGGREV
Trigger: CACCTCCCTCCCTCCCCTCAAAAAGTGTTGCAATGC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGAAGGCATCTTCAGTTaGGTGAGCTTGGCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTEGIFS*VSLALA
Trigger: TGCCAAAGCCAAGCTCACCAAACTGAAGATGCCTTC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATAGGCTTCTCTGGGGTTaGTTCACTGTCACTGTCCTC +
Preference number: 5 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNRLLWG*FTVTVL
Trigger: GAGGACAGTGACAGTGAACAAACCCCAGAGAAGCCT...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACATTTCTTCGCTGTCACTaGAACTGCTCTCGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTFLRCH*NCSRSL
Trigger: CAGAGAGCGAGAGCAGTTCAAGTGACAGCGAAGAAA...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCATTGTCCAGCTGCCATTaGTTTGTTGTTGGAGGCTCA +
Preference number: 5 (lower is better)
Translates to: GINVGSLLPQGRKFRIESLSSCH*FVVGGS
Trigger: TGAGCCTCCAACAACAAACAAATGGCAGCTGGACAA...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGTCTTCACCTTGGGCTaGTCTTTGGAAGTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: DKGDKCGPICVREIATYFVFTLG*SLEVWS
Trigger: AGACCAGACTTCCAAAGACAAGCCCAAGGTGAAGAC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGTCTTCACCTTGGGCTaGTCTTTGGAAGTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTVFTLG*SLEVWS
Trigger: AGACCAGACTTCCAAAGACAAGCCCAAGGTGAAGAC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACACCTTTCGTCTTCACCTaGGGCTTGTCTTTGGAAGTC +
Preference number: 5 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTPFVFT*GLSLEV
Trigger: GACTTCCAAAGACAAGCCCAAGGTGAAGACGAAAGG...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACTTCACCATCAAGCTTaGTGGGGGAGGAGTGTCCCT +
Preference number: 5 (lower is better)
Translates to: YNLALSNDLPQYRFCLWELHHQA*WGRSVP
Trigger: AGGGACACTCCTCCCCCACAAAGCTTGATGGTGAAG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATCTCCGGAAGAACCCTaGTGCTCCGAGGAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQSPEEP*CSEELL
Trigger: CAGAAGCTCCTCGGAGCACAAGGGTTCTTCCGGAGA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCAGCAAATATTTTCTCTaGTGTTGGCGCTGTGGCATC +
Preference number: 5 (lower is better)
Translates to: NSELAGQHELPHNCRPQISKYFL*CWRCGI
Trigger: GATGCCACAGCGCCAACACAAGAGAAAATATTTGCT...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS CCA 90 bp GTGAAGGTCTGCTTGTTGTTTGTCAAACTTCACTTGAGGCTTCCCTaGTTTAGAGTTACCATTTGGCAAAGAAGGCACTGGAAAAGGATT +
Preference number: 5 (lower is better)
Translates to: VKVCLLFVKLHLRLP*FRVTIWQRRHWKRI
Trigger: AATCCTTTTCCAGTGCCTTCTTTGCCAAATGGTAACTCTAAACCAGGGAAGCCTCAAGTGAAGTTTGACAAACAACAAGCAGACCTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS-3UTR CAA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACGGAATGCTGCTCCCTTaGTCAGGAATTAAAGGATAT +
Preference number: 5 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHGMLLP*SGIKGY
Trigger: ATATCCTTTAATTCCTGACAAAGGGAGCAGCATTCC...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATTGGGCTTCTGCTGCATaGCAACACTTTTTGAGGGGA +
Preference number: 5 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNWASAA*QHFLRG
Trigger: TCCCCTCAAAAAGTGTTGCAATGCAGCAGAAGCCCA...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATTTGGTGAGCTTGGCTTaGGCAGGCACTTTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNLVSLA*AGTFKS
Trigger: AGACTTGAAAGTGCCTGCCAAAGCCAAGCTCACCAA...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAAGCGGTGAGAGCAGCTaGGTGTCTCTCAAAGGCAAT +
Preference number: 5 (lower is better)
Translates to: YNLALSNDLPQYRFCLWESGESS*VSLKGN
Trigger: ATTGCCTTTGAGAGACACCAAGCTGCTCTCACCGCT...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAACTTCACCATCAAGCTTaGTGGGGGAGGAGTGTCCCT +
Preference number: 5 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQLHHQA*WGRSVP
Trigger: AGGGACACTCCTCCCCCACAAAGCTTGATGGTGAAG...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGGAGCATTTCCTTCTTaGAGGACTGTGAGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQGAFPS*RTVRRA
Trigger: GGCCCTCCTCACAGTCCTCAAAGAAGGAAATGCTCC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACAGGAATGGAAGAGTCTTaGTGGTTGCTCTTGGTACTG +
Preference number: 5 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTGMEES*WLLLVL
Trigger: CAGTACCAAGAGCAACCACAAAGACTCTTCCATTCC...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTGCACTGGAAAAGGATTaGCAGTATCTCCGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: DKGDKCGPICVREIATYFALEKD*QYLRKN
Trigger: GTTCTTCCGGAGATACTGCAAATCCTTTTCCAGTGC...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp AACTCTGAGTTGGCTGGACAACATGAGTTACCACATAACTGTAGACCACAGATCTTTGTCAAACTTCACTaGAGGCTTCCCTGGTTTAGA +
Preference number: 5 (lower is better)
Translates to: NSELAGQHELPHNCRPQIFVKLH*RLPWFR
Trigger: TCTAAACCAGGGAAGCCTCAAGTGAAGTTTGACAAA...GATCTGTGGTCTACAGTTATGTGGTAACTCATGTTGTCCAGCCAACTCAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGTTTCTTGTTCACTGACGAAACTCTGAGTTGGCTGGACAACATGAGTTACCACCATGTGAAGGTCTGCTaGTTGTTTGTCAAACTTCAC +
Preference number: 5 (lower is better)
Translates to: CFLFTDETLSWLDNMSYHHVKVC*LFVKLH
Trigger: GTGAAGTTTGACAAACAACAAGCAGACCTTCACATG...GTGGTAACTCATGTTGTCCAGCCAACTCAGAGTTTCGTCAGTGAACAAGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCAAGCAAATATTTTCTCTaGTGTTGGCGCTGTGGCATC +
Preference number: 5 (lower is better)
Translates to: GINVGSLLPQGRKFRIESSKYFL*CWRCGI
Trigger: GATGCCACAGCGCCAACACAAGAGAAAATATTTGCT...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAATGGTGTGCCTGTGCTaGCAATGCATGGAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEMVCLC*QCMEKV
Trigger: CACCTTCTCCATGCATTGCAAGCACAGGCACACCAT...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307808.10
CDS GCA 90 bp TCTTCTGCTAGAGCGTTTATCACATTGTTTCACAATCTGGCTGTGTaGTTATCTGCCAGGTTAAACAGAACAGGGACTCCCATTTTTCTA +
Preference number: 5 (lower is better)
Translates to: SSARAFITLFHNLAV*LSARLNRTGTPIFL
Trigger: TAGAAAAATGGGAGTCCCTGTTCTGTTTAACCTGGCAGATAAGCACACAGCCAGATTGTGAAACAATGTGATAAACGCTCTAGCAGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511996.5
CDS-3UTR CAA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATGGGCTTCTGCTGCATaGCAACACTTTTTGAGGGGA +
Preference number: 5 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEWASAA*QHFLRG
Trigger: TCCCCTCAAAAAGTGTTGCAATGCAGCAGAAGCCCA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAAGCGGTGAGAGCAGCTaGGTGTCTCTCAAAGGCAAT +
Preference number: 5 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQSGESS*VSLKGN
Trigger: ATTGCCTTTGAGAGACACCAAGCTGCTCTCACCGCT...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTCTACTCTTCTCTGCTaGGGAATGGAAGAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: DKGDKCGPICVREIATYFSTLLC*GMEESL
Trigger: CAAAGACTCTTCCATTCCCAAGCAGAGAAGAGTAGA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACATCTACTCTTCTCTGCTaGGGAATGGAAGAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTSTLLC*GMEESL
Trigger: CAAAGACTCTTCCATTCCCAAGCAGAGAAGAGTAGA...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGTGTGCCTGTGCTTCTaGCAATGCATGGAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQVCLCF*QCMEKV
Trigger: CACCTTCTCCATGCATTGCAAGAAGCACAGGCACAC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544085.6
CDS-3UTR CAA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAACAGCTCATCACCTTTaGCTGTCTTGTAGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQTAHHL*LSCRAL
Trigger: GAGAGCCCTACAAGACAGCAAAAGGTGATGAGCTGT...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGGATTGTGGCTAATGTaGCCAACAGAAAGTGGTCCA +
Preference number: 5 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEGLWLM*PTESGP
Trigger: TGGACCACTTTCTGTTGGCAACATTAGCCACAATCC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATTTTTGGCATGGAGACTaGGCATTGGTTCAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNFWHGD*ALVQFL
Trigger: CAAGAACTGAACCAATGCCAAGTCTCCATGCCAAAA...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGAAGGCATCTTCAGTTaGGTGAGCTTGGCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQEGIFS*VSLALA
Trigger: TGCCAAAGCCAAGCTCACCAAACTGAAGATGCCTTC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATTTTGGCCAACTTGCTaGAGCTGTCTGAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQFWPTC*SCLSSS
Trigger: AGAGGAGCTCAGACAGCTCAAGCAAGTTGGCCAAAA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATCACCCTTTCTCTTTTaGGCCAACTTGCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: YNLALSNDLPQYRFCLWESPFLF*ANLLEL
Trigger: CAGCTCAAGCAAGTTGGCCAAAAAGAGAAAGGGTGA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGGAATGGAAGAGTCTTaGTGGTTGCTCTTGGTACTG +
Preference number: 5 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEGMEES*WLLLVL
Trigger: CAGTACCAAGAGCAACCACAAAGACTCTTCCATTCC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACACATGTGAAGGTCTGCTaGTTGTTTGTCAAACTTCAC +
Preference number: 5 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTHVKVC*LFVKLH
Trigger: GTGAAGTTTGACAAACAACAAGCAGACCTTCACATG...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTTTCTCCTCATTTCATTaGCAACTTGTATCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: DKGDKCGPICVREIATYFFSSFH*QLVSCW
Trigger: CCAGCAGGATACAAGTTGCAAATGAAATGAGGAGAA...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACACCTCGACACATCCCTTaGTGTATTTACAAACTACCA +
Preference number: 5 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTPRHIP*CIYKLP
Trigger: TGGTAGTTTGTAAATACACAAAGGGATGTGTCGAGG...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTACCTCAGTACAGATTTaGCCTTTGGGAATTGTAAGC +
Preference number: 5 (lower is better)
Translates to: DKGDKCGPICVREIATYFTSVQI*PLGIVS
Trigger: GCTTACAATTCCCAAAGGCAAAATCTGTACTGAGGT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATGCGCCATCTTTGGATaGTGGCTAATGTTGCCAACA +
Preference number: 5 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQCAIFG*WLMLPT
Trigger: TGTTGGCAACATTAGCCACAATCCAAAGATGGCGCA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATGGAAGAGTTTGCTGGTaGGAATGTATAGGTGACAAA +
Preference number: 5 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNGRVCW*ECIGDK
Trigger: TTTGTCACCTATACATTCCAACCAGCAAACTCTTCC...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGTATAAATGTTGGTTCCCTTCTTCCCCAAGGGAGGAAATTCAGAATAGAGTCATTCCTTGCTGAGAATTaGAGTGAGTTTTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: GINVGSLLPQGRKFRIESFLAEN*SEFLKM
Trigger: CATCTTCAAAAACTCACTCAAATTCTCAGCAAGGAA...TGACTCTATTCTGAATTTCCTCCCTTGGGGAAGAAGGGAACCAACATTTATACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATTGTCCAGCTGCCATTaGTTTGTTGTTGGAGGCTCA +
Preference number: 5 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQLSSCH*FVVGGS
Trigger: TGAGCCTCCAACAACAAACAAATGGCAGCTGGACAA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATCTTTGTGGTTGCTCTaGGTACTGCTGGCACTTTTG +
Preference number: 5 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQSLWLL*VLLALL
Trigger: CAAAAGTGCCAGCAGTACCAAGAGCAACCACAAAGA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATATGTCTGGACTGTTTTaGAGGCTTCCAATGTGCAAA +
Preference number: 5 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNMSGLF*RLPMCK
Trigger: TTTGCACATTGGAAGCCTCAAAAACAGTCCAGACAT...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GACAAGGGAGATAAGTGCGGTCCAATCTGTGTAAGGGAAATAGCTACATATTTTAAATTAAAACAAGATTaGGGACACATGCGTGCGTAC +
Preference number: 5 (lower is better)
Translates to: DKGDKCGPICVREIATYFKLKQD*GHMRAY
Trigger: GTACGCACGCATGTGTCCCAAATCTTGTTTTAATTT...AAAATATGTAGCTATTTCCCTTACACAGATTGGACCGCACTTATCTCCCTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAATTTTGGCATGGAGACTaGGCATTGGTTCAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQFWHGD*ALVQFL
Trigger: CAAGAACTGAACCAATGCCAAGTCTCCATGCCAAAA...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GGGGGTTTTAGCTTTCTAAACATCCTGAGACCTGAAATTAAAGGATACAGGACATTCCTTGCTGAGAATTaGAGTGAGTTTTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: GGFSFLNILRPEIKGYRTFLAEN*SEFLKM
Trigger: CATCTTCAAAAACTCACTCAAATTCTCAGCAAGGAA...TGTCCTGTATCCTTTAATTTCAGGTCTCAGGATGTTTAGAAAGCTAAAACCCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAATTTGTCAAACTTCACTaGAGGCTTCCCTGGTTTAGA +
Preference number: 5 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEFVKLH*RLPWFR
Trigger: TCTAAACCAGGGAAGCCTCAAGTGAAGTTTGACAAA...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAATATTTTCTCTTGTGTaGGCGCTGTGGCATCTGAGA +
Preference number: 5 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQIFSLV*ALWHLR
Trigger: TCTCAGATGCCACAGCGCCAACACAAGAGAAAATAT...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAATGTCTGGACTGTTTTaGAGGCTTCCAATGTGCAAA +
Preference number: 5 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEMSGLF*RLPMCK
Trigger: TTTGCACATTGGAAGCCTCAAAAACAGTCCAGACAT...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp GTCCTGATGAAACAAATGTCTGGACTGTTTTTGAGGCTTCCAATGTGCAAAAATAAATTAAAACAAGATTaGGGACACATGCGTGCGTAC +
Preference number: 5 (lower is better)
Translates to: VLMKQMSGLFLRLPMCKNKLKQD*GHMRAY
Trigger: GTACGCACGCATGTGTCCCAAATCTTGTTTTAATTT...ATTTTTGCACATTGGAAGCCTCAAAAACAGTCCAGACATTTGTTTCATCAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAACAGATTTCATGTTTCTaGTTCACTGACGAAACTCTG +
Preference number: 5 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEQISCF*FTDETL
Trigger: CAGAGTTTCGTCAGTGAACAAGAAACATGAAATCTG...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAACCTGATTCTGGTGCCTaGTCCTTTACATATAACAGA +
Preference number: 5 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQPDSGA*SFTYNR
Trigger: TCTGTTATATGTAAAGGACAAGGCACCAGAATCAGG...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TATAATCTAGCCCTTTCAAATGATCTACCTCAGTACAGATTTTGCCTTTGGGAAGTTTTAGAAGATTCTTaGTGGGAGGATGAAGATGAA +
Preference number: 5 (lower is better)
Translates to: YNLALSNDLPQYRFCLWEVLEDS*WEDEDE
Trigger: TTCATCTTCATCCTCCCACAAAGAATCTTCTAAAAC...TTCCCAAAGGCAAAATCTGTACTGAGGTAGATCATTTGAAAGGGCTAGATTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAACAGATTTCATGTTTCTaGTTCACTGACGAAACTCTG +
Preference number: 5 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQQISCF*FTDETL
Trigger: CAGAGTTTCGTCAGTGAACAAGAAACATGAAATCTG...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAAAATGTGAAACATGCTaGGTAGGAAACATGTACAGG +
Preference number: 5 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQKCETC*VGNMYR
Trigger: CCTGTACATGTTTCCTACCAAGCATGTTTCACATTT...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS-3UTR CAA 90 bp TGGAGTCCTTCATTACTTATGGTTTACAGATGGCCATTAGAAGTTACTAAACAAGTTTTAGAAGATTCTTaGTGGGAGGATGAAGATGAA +
Preference number: 5 (lower is better)
Translates to: WSPSLLMVYRWPLEVTKQVLEDS*WEDEDE
Trigger: TTCATCTTCATCCTCCCACAAAGAATCTTCTAAAAC...TTGTTTAGTAACTTCTAATGGCCATCTGTAAACCATAAGTAATGAAGGACTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS GCA 72 bp TCCCGGGGCTCGGCTGCGGAACCGCGGAGGCAAAGGTaGAGCTGCGGCCGCAACGCGCGCAGGCGGCGGCCG +
Preference number: 6 (lower is better)
Translates to: SRGSAAEPRRQR*SCGRNARRRRP
Trigger: CGGCCGCCGCCTGCGCGCGTTGCGGCCGCAGCTGCACCTTTGCCTCCGCGGTTCCGCAGCCGAGCCCCGGGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000674009.1
CDS CAA 90 bp GTCCCGGGTCGGGCGCCCTCGTCACCTCCGCCCTCCCCTGACCTGTaGCGGTGGGAAAGGGCGCAAGTGCGGACGACGCAGGGGAGCGCC +
Preference number: 6 (lower is better)
Translates to: VPGRAPSSPPPSPDL*RWERAQVRTTQGSA
Trigger: GGCGCTCCCCTGCGTCGTCCGCACTTGCGCCCTTTCCCACCGCAACAGGTCAGGGGAGGGCGGAGGTGACGAGGGCGCCCGACCCGGGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000511996.5
ENST00000674009.1
CDS GCA 72 bp TGCCCTTACTCTCTGGGTGCCGCCGTGGGGGCTCTGTaGTCCTGGGGCCCTCTGGTGGCGCAGCTGGCTGGC +
Preference number: 6 (lower is better)
Translates to: CPYSLGAAVGAL*SWGPLVAQLAG
Trigger: GCCAGCCAGCTGCGCCACCAGAGGGCCCCAGGAGCACAGAGCCCCCACGGCGGCACCCAGAGAGTAAGGGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS GCA 72 bp GATGGACATCCGGGCACTGGGGCCTCTGCGGCGATCTaGACTTCAGACGAGCCCGGGGAGCGCCGCGTCCGA +
Preference number: 6 (lower is better)
Translates to: DGHPGTGASAAI*TSDEPGERRVR
Trigger: TCGGACGCGGCGCTCCCCGGGCTCGTCTGAAGTGCAGATCGCCGCAGAGGCCCCAGTGCCCGGATGTCCATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS CCA 72 bp ACTGTCGCTGCTGCCCTTACTCTCTGGGTGCCGCCGTaGGGGCTCTGTGCTCCTGGGGCCCTCTGGTGGCGC +
Preference number: 6 (lower is better)
Translates to: TVAAALTLWVPP*GLCAPGALWWR
Trigger: GCGCCACCAGAGGGCCCCAGGAGCACAGAGCCCCCACGGCGGCACCCAGAGAGTAAGGGCAGCAGCGACAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS GCA 72 bp GGCCCCCACGCTCGAAGACCGCCGGCGCCCAACGCCTaGCCAGCAACAGCACAACGCGGGCCACAGTTAGAA +
Preference number: 6 (lower is better)
Translates to: GPHARRPPAPNA*PATAQRGPQLE
Trigger: TTCTAACTGTGGCCCGCGTTGTGCTGTTGCTGGGCAGGCGTTGGGCGCCGGCGGTCTTCGAGCGTGGGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307808.10
ENST00000544085.6
CDS CCA 72 bp TGGCGGCAGCCACTAGTCCTGCTGCCGCTGCCACTGTaGGGTGGGCCCTGGCTCTCAGTCAGGGGAACAAGA +
Preference number: 6 (lower is better)
Translates to: WRQPLVLLPLPL*GGPWLSVRGTR
Trigger: TCTTGTTCCCCTGACTGAGAGCCAGGGCCCACCCCACAGTGGCAGCGGCAGCAGGACTAGTGGCTGCCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503369.1
ENST00000544085.6
ENST00000674009.1
CDS CCA 72 bp CTGTCTTTGCGGCTGTCCTCCTGGACCACCACGGCTTaGCGGCAGCCACTAGTCCTGCTGCCGCTGCCACTG +
Preference number: 6 (lower is better)
Translates to: LSLRLSSWTTTA*RQPLVLLPLPL
Trigger: CAGTGGCAGCGGCAGCAGGACTAGTGGCTGCCGCCAAGCCGTGGTGGTCCAGGAGGACAGCCGCAAAGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503369.1
ENST00000544085.6
ENST00000674009.1
CDS CAA 90 bp CAATGGGAGTCTGTCTTTGCGGCTGTCCTCCTGGACCACCACGGCTaGGCGGCAGCCACTAGTCCTGCTGCCGCTGCCACTGTGGGGTGG +
Preference number: 6 (lower is better)
Translates to: QWESVFAAVLLDHHG*AAATSPAAAATVGW
Trigger: CCACCCCACAGTGGCAGCGGCAGCAGGACTAGTGGCTGCCGCCAAGCCGTGGTGGTCCAGGAGGACAGCCGCAAAGACAGACTCCCATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503369.1
ENST00000544085.6
ENST00000674009.1
CDS TCA 72 bp CCAGGCAGTTGGTACCACAGCTGCCGCTGCCTGGCATaGGAACTCGGGCCGAGACCAGAGGGAACCACCGCA +
Preference number: 6 (lower is better)
Translates to: PGSWYHSCRCLA*ELGPRPEGTTA
Trigger: TGCGGTGGTTCCCTCTGGTCTCGGCCCGAGTTCTCATGCCAGGCAGCGGCAGCTGTGGTACCAACTGCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514970.2
CDS CCA 72 bp CAAGAAAGTTGCGGTGGTACGGCCCGCCTACTTAAATaGGCAGGGCGCTCGGCGGCCCTAGCCAAAGGCAGG +
Preference number: 6 (lower is better)
Translates to: QESCGGTARLLK*AGRSAALAKGR
Trigger: CCTGCCTTTGGCTAGGGCCGCCGAGCGCCCTGCCCATTTAAGTAGGCGGGCCGTACCACCGCAACTTTCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544085.6
CDS TCA 72 bp ATAATTCAGCTTATAGAGCCAGGGGTCTTCCGTCCATaGGCGCCTTCACCCCGCGGGCCCTGCTGCCAGCGC +
Preference number: 6 (lower is better)
Translates to: IIQLIEPGVFRP*APSPRGPCCQR
Trigger: GCGCTGGCAGCAGGGCCCGCGGGGTGAAGGCGCTCATGGACGGAAGACCCCTGGCTCTATAAGCTGAATTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000511722.5
ENST00000544085.6
CDS GCA 72 bp ATTCAGAATGCTCCTGACTCGTGGCACTGTCGCTGCTaGCCTTACTCTCTGGGTGCCGCCGTGGGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: IQNAPDSWHCRC*PYSLGAAVGAL
Trigger: CAGAGCCCCCACGGCGGCACCCAGAGAGTAAGGGCAGCAGCGACAGTGCCACGAGTCAGGAGCATTCTGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS GCA 72 bp TGGATTCAGAATGCTCCTGACTCGTGGCACTGTCGCTaGTGCCCTTACTCTCTGGGTGCCGCCGTGGGGGCT +
Preference number: 6 (lower is better)
Translates to: WIQNAPDSWHCR*CPYSLGAAVGA
Trigger: AGCCCCCACGGCGGCACCCAGAGAGTAAGGGCAGCAGCGACAGTGCCACGAGTCAGGAGCATTCTGAATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS GCA 72 bp GTCCGAGTCCGCCGGGATACCCCCTGTCAAGAAAGTTaGGGTGGTACGGCCCGCCTACTTAAATGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: VRVRRDTPCQES*GGTARLLKWAG
Trigger: CCCTGCCCATTTAAGTAGGCGGGCCGTACCACCGCAACTTTCTTGACAGGGGGTATCCCGGCGGACTCGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544085.6
CDS CCA 72 bp ACCAAGGCGATCCTGGGTCAGGTGCTGGCTGTCCGGTaGGCCGCAGCTTTTGGCATGGAGACTTGGCATTGG +
Preference number: 6 (lower is better)
Translates to: TKAILGQVLAVR*AAAFGMETWHW
Trigger: CCAATGCCAAGTCTCCATGCCAAAAGCTGCGGCCCACCGGACAGCCAGCACCTGACCCAGGATCGCCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CCA 72 bp CTAGTCCTGCTGCCGCTGCCACTGTGGGGTGGGCCCTaGCTCTCAGTCAGGGGAACAAGAGCAAAGTGCTCA +
Preference number: 6 (lower is better)
Translates to: LVLLPLPLWGGP*LSVRGTRAKCS
Trigger: TGAGCACTTTGCTCTTGTTCCCCTGACTGAGAGCCAGGGCCCACCCCACAGTGGCAGCGGCAGCAGGACTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503369.1
ENST00000544085.6
ENST00000674009.1
CDS CAA 72 bp CTTGCTGCGGCCCGGGGCCGTCCTTTCGTCTTCACCTaGGGCTTGTCTTTGGAAGTCTGGTCTCGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: LAAARGRPFVFT*GLSLEVWSREP
Trigger: TGGCTCCCGAGACCAGACTTCCAAAGACAAGCCCAAGGTGAAGACGAAAGGACGGCCCCGGGCCGCAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CAA 90 bp AGGCGATCCTGGGTCAGGTGCTGGCTGTCCGGTGGGCCGCAGCTTTaGGCATGGAGACTTGGCATTGGTTCAGTTCTTGGCTGCGCCATC +
Preference number: 6 (lower is better)
Translates to: RRSWVRCWLSGGPQL*AWRLGIGSVLGCAI
Trigger: GATGGCGCAGCCAAGAACTGAACCAATGCCAAGTCTCCATGCCAAAAGCTGCGGCCCACCGGACAGCCAGCACCTGACCCAGGATCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS GCA 72 bp GGTTCCAACGGTTTGCCTTTGTGGGGGCTCCTGCTGTaGCGGAGACTTCTGACAGCTCCTCTTTCCGGGGTG +
Preference number: 6 (lower is better)
Translates to: GSNGLPLWGLLL*RRLLTAPLSGV
Trigger: CACCCCGGAAAGAGGAGCTGTCAGAAGTCTCCGGCACAGCAGGAGCCCCCACAAAGGCAAACCGTTGGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CCA 72 bp TTGCTGCGGCCCGGGGCCGTCCTTTCGTCTTCACCTTaGGCTTGTCTTTGGAAGTCTGGTCTCGGGAGCCAT +
Preference number: 6 (lower is better)
Translates to: LLRPGAVLSSSP*ACLWKSGLGSH
Trigger: ATGGCTCCCGAGACCAGACTTCCAAAGACAAGCCCAAGGTGAAGACGAAAGGACGGCCCCGGGCCGCAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CCA 72 bp AAAGGCAATGGGAGTCTGTCTTTGCGGCTGTCCTCCTaGACCACCACGGCTTGGCGGCAGCCACTAGTCCTG +
Preference number: 6 (lower is better)
Translates to: KGNGSLSLRLSS*TTTAWRQPLVL
Trigger: CAGGACTAGTGGCTGCCGCCAAGCCGTGGTGGTCCAGGAGGACAGCCGCAAAGACAGACTCCCATTGCCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503369.1
ENST00000544085.6
ENST00000674009.1
CDS CAA 90 bp GGTGAGAGCAGCTTGGTGTCTCTCAAAGGCAATGGGAGTCTGTCTTaGCGGCTGTCCTCCTGGACCACCACGGCTTGGCGGCAGCCACTA +
Preference number: 6 (lower is better)
Translates to: GESSLVSLKGNGSLS*RLSSWTTTAWRQPL
Trigger: TAGTGGCTGCCGCCAAGCCGTGGTGGTCCAGGAGGACAGCCGCAAAGACAGACTCCCATTGCCTTTGAGAGACACCAAGCTGCTCTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503369.1
ENST00000544085.6
ENST00000674009.1
CDS CCA 72 bp GGGTCAGGTGCTGGCTGTCCGGTGGGCCGCAGCTTTTaGCATGGAGACTTGGCATTGGTTCAGTTCTTGGCT +
Preference number: 6 (lower is better)
Translates to: GSGAGCPVGRSF*HGDLALVQFLA
Trigger: AGCCAAGAACTGAACCAATGCCAAGTCTCCATGCCAAAAGCTGCGGCCCACCGGACAGCCAGCACCTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CAA 72 bp TGGGTCAGGTGCTGGCTGTCCGGTGGGCCGCAGCTTTaGGCATGGAGACTTGGCATTGGTTCAGTTCTTGGC +
Preference number: 6 (lower is better)
Translates to: WVRCWLSGGPQL*AWRLGIGSVLG
Trigger: GCCAAGAACTGAACCAATGCCAAGTCTCCATGCCAAAAGCTGCGGCCCACCGGACAGCCAGCACCTGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CAA 72 bp AGCTTGGTGTCTCTCAAAGGCAATGGGAGTCTGTCTTaGCGGCTGTCCTCCTGGACCACCACGGCTTGGCGG +
Preference number: 6 (lower is better)
Translates to: SLVSLKGNGSLS*RLSSWTTTAWR
Trigger: CCGCCAAGCCGTGGTGGTCCAGGAGGACAGCCGCAAAGACAGACTCCCATTGCCTTTGAGAGACACCAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503369.1
ENST00000544085.6
ENST00000674009.1
CDS TCA 72 bp CGGGAGGCTGGGGTATCCGAGAGAGCAGGTCTAGGGTaGTCTTCACCATCAAGCTTTGTGGGGGAGGAGTGT +
Preference number: 6 (lower is better)
Translates to: REAGVSERAGLG*SSPSSFVGEEC
Trigger: ACACTCCTCCCCCACAAAGCTTGATGGTGAAGATCACCCTAGACCTGCTCTCTCGGATACCCCAGCCTCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503369.1
ENST00000544085.6
ENST00000674009.1
CDS CAA 90 bp GGAATGGAAGAGTCTTTGTGGTTGCTCTTGGTACTGCTGGCACTTTaGGGAGGGTCCTGGCCACAGGTGTCTGCTTCCCGCCTTGACCTC +
Preference number: 6 (lower is better)
Translates to: GMEESLWLLLVLLAL*GGSWPQVSASRLDL
Trigger: GAGGTCAAGGCGGGAAGCAGACACCTGTGGCCAGGACCCTCCCAAAAGTGCCAGCAGTACCAAGAGCAACCACAAAGACTCTTCCATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CCA 72 bp TTGCTCTTGGTACTGCTGGCACTTTTGGGAGGGTCCTaGCCACAGGTGTCTGCTTCCCGCCTTGACCTCTTA +
Preference number: 6 (lower is better)
Translates to: LLLVLLALLGGS*PQVSASRLDLL
Trigger: TAAGAGGTCAAGGCGGGAAGCAGACACCTGTGGCCAGGACCCTCCCAAAAGTGCCAGCAGTACCAAGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CAA 72 bp ACAAGAGCAAAGTGCTCAGGGGTCCTGTCCTCCACATaGTCCTTCGCGGGTTCTGGGCCTGAGAGAGCCTTA +
Preference number: 6 (lower is better)
Translates to: TRAKCSGVLSST*SFAGSGPERAL
Trigger: TAAGGCTCTCTCAGGCCCAGAACCCGCGAAGGACAATGTGGAGGACAGGACCCCTGAGCACTTTGCTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS TCA 72 bp TCTTCACCATCAAGCTTTGTGGGGGAGGAGTGTCCCTaGGCGGTGAGAGCAGCTTGGTGTCTCTCAAAGGCA +
Preference number: 6 (lower is better)
Translates to: SSPSSFVGEECP*AVRAAWCLSKA
Trigger: TGCCTTTGAGAGACACCAAGCTGCTCTCACCGCTCAGGGACACTCCTCCCCCACAAAGCTTGATGGTGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503369.1
ENST00000544085.6
ENST00000674009.1
CDS CCA 72 bp CGGTGGGCCGCAGCTTTTGGCATGGAGACTTGGCATTaGTTCAGTTCTTGGCTGCGCCATCTTTGGATTGTG +
Preference number: 6 (lower is better)
Translates to: RWAAAFGMETWH*FSSWLRHLWIV
Trigger: CACAATCCAAAGATGGCGCAGCCAAGAACTGAACCAATGCCAAGTCTCCATGCCAAAAGCTGCGGCCCACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CCA 72 bp TATCTCCGGAAGAACCCTTGTGCTCCGAGGAGCTTCTaGAGCCCTTCCCCTCTACTCTTCTCTGCTTGGGAA +
Preference number: 6 (lower is better)
Translates to: YLRKNPCAPRSF*SPSPLLFSAWE
Trigger: TTCCCAAGCAGAGAAGAGTAGAGGGGAAGGGCTCCAGAAGCTCCTCGGAGCACAAGGGTTCTTCCGGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CCA 72 bp GGTGACATAGGAAGATGTCATATTCTGGATGGTGACTaGGGTGCTGATAGTGGCAGCCACCCCACTGCTCCC +
Preference number: 6 (lower is better)
Translates to: GDIGRCHILDGD*GADSGSHPTAP
Trigger: GGGAGCAGTGGGGTGGCTGCCACTATCAGCACCCCAGTCACCATCCAGAATATGACATCTTCCTATGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
CDS CAA 90 bp GAGCCCTTCCCCTCTACTCTTCTCTGCTTGGGAATGGAAGAGTCTTaGTGGTTGCTCTTGGTACTGCTGGCACTTTTGGGAGGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: EPFPSTLLCLGMEES*WLLLVLLALLGGSW
Trigger: CCAGGACCCTCCCAAAAGTGCCAGCAGTACCAAGAGCAACCACAAAGACTCTTCCATTCCCAAGCAGAGAAGAGTAGAGGGGAAGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CAA 90 bp TGCTCCGAGGAGCTTCTGGAGCCCTTCCCCTCTACTCTTCTCTGCTaGGGAATGGAAGAGTCTTTGTGGTTGCTCTTGGTACTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: CSEELLEPFPSTLLC*GMEESLWLLLVLLA
Trigger: TGCCAGCAGTACCAAGAGCAACCACAAAGACTCTTCCATTCCCAAGCAGAGAAGAGTAGAGGGGAAGGGCTCCAGAAGCTCCTCGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS GCA 72 bp TTGCTTGAGCTGTCTGAGCTCCTCTTCTCAGAGCTGTaGTTCTTCCCTGCGGGCGGCTGTTTATCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: LLELSELLFSEL*FFPAGGCLSSA
Trigger: AGCAGAAGATAAACAGCCGCCCGCAGGGAAGAAGCACAGCTCTGAGAAGAGGAGCTCAGACAGCTCAAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503369.1
ENST00000544085.6
ENST00000674009.1
CDS CCA 72 bp ACCTTGCTGCTTCCTTGCGTCCGGGGAAGAGTTTGCTaGTTGGAATGTATAGGTGACAAAGGGGGAACTGGG +
Preference number: 6 (lower is better)
Translates to: TLLLPCVRGRVC*LECIGDKGGTG
Trigger: CCCAGTTCCCCCTTTGTCACCTATACATTCCAACCAGCAAACTCTTCCCCGGACGCAAGGAAGCAGCAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CCA 72 bp TCTGCTTGGGAATGGAAGAGTCTTTGTGGTTGCTCTTaGTACTGCTGGCACTTTTGGGAGGGTCCTGGCCAC +
Preference number: 6 (lower is better)
Translates to: SAWEWKSLCGCS*YCWHFWEGPGH
Trigger: GTGGCCAGGACCCTCCCAAAAGTGCCAGCAGTACCAAGAGCAACCACAAAGACTCTTCCATTCCCAAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CCA 72 bp CGCGGGCCACAGTTAGAAAGGAAAAGAAATTGCCTCTaGGCTCACTTGAAGTTGTCCGAGTCCGCCGGGATA +
Preference number: 6 (lower is better)
Translates to: RGPQLERKRNCL*AHLKLSESAGI
Trigger: TATCCCGGCGGACTCGGACAACTTCAAGTGAGCCCAGAGGCAATTTCTTTTCCTTTCTAACTGTGGCCCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544085.6
CDS GCA 72 bp AGCCTTTACTGTTATTGCTGCTGCCATGAACCTTGCTaGTTCCTTGCGTCCGGGGAAGAGTTTGCTGGTTGG +
Preference number: 6 (lower is better)
Translates to: SLYCYCCCHEPC*FLASGEEFAGW
Trigger: CCAACCAGCAAACTCTTCCCCGGACGCAAGGAAGCAGCAAGGTTCATGGCAGCAGCAATAACAGTAAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS GCA 72 bp AACTGTCTGAGTCACTGGTGCTTTCTGACTCTGCACTaGTGGAATGTGCTGATGCCACTGGTTCTGGAAGGG +
Preference number: 6 (lower is better)
Translates to: NCLSHWCFLTLH*WNVLMPLVLEG
Trigger: CCCTTCCAGAACCAGTGGCATCAGCACATTCCAGCAGTGCAGAGTCAGAAAGCACCAGTGACTCAGACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000511722.5
ENST00000514970.2
ENST00000544085.6
ENST00000674009.1
CDS GCA 72 bp GGATGGTGTGCCTGTGCTTGCAATGCATGGAGAAGGTaGCTGGGCGACTTTGGAAGAACTCTCGAAGTGTTT +
Preference number: 6 (lower is better)
Translates to: GWCACACNAWRR*LGDFGRTLEVF
Trigger: AAACACTTCGAGAGTTCTTCCAAAGTCGCCCAGGCACCTTCTCCATGCATTGCAAGCACAGGCACACCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307808.10
CDS CCA 72 bp TCTCGCTCTCTGAGTCTGAGGAACTGTCTGAGTCACTaGTGCTTTCTGACTCTGCACTGCTGGAATGTGCTG +
Preference number: 6 (lower is better)
Translates to: SRSLSLRNCLSH*CFLTLHCWNVL
Trigger: CAGCACATTCCAGCAGTGCAGAGTCAGAAAGCACCAGTGACTCAGACAGTTCCTCAGACTCAGAGAGCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000511722.5
ENST00000514970.2
ENST00000544085.6
ENST00000674009.1
CDS CAA 90 bp CCACAGTTAGAAAGGAAAAGAAATTGCCTCTGGGCTCACTTGAAGTaGTCCGAGTCCGCCGGGATACCCCCTGTCAAGAAAGTTGCGGTG +
Preference number: 6 (lower is better)
Translates to: PQLERKRNCLWAHLK*SESAGIPPVKKVAV
Trigger: CACCGCAACTTTCTTGACAGGGGGTATCCCGGCGGACTCGGACAACTTCAAGTGAGCCCAGAGGCAATTTCTTTTCCTTTCTAACTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544085.6
CDS GCA 72 bp ATTTGGCTGGGCAATAGCCTTTACTGTTATTGCTGCTaGCATGAACCTTGCTGCTTCCTTGCGTCCGGGGAA +
Preference number: 6 (lower is better)
Translates to: IWLGNSLYCYCC*HEPCCFLASGE
Trigger: TTCCCCGGACGCAAGGAAGCAGCAAGGTTCATGGCAGCAGCAATAACAGTAAAGGCTATTGCCCAGCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CAA 72 bp GAGCTTCTGGAGCCCTTCCCCTCTACTCTTCTCTGCTaGGGAATGGAAGAGTCTTTGTGGTTGCTCTTGGTA +
Preference number: 6 (lower is better)
Translates to: ELLEPFPSTLLC*GMEESLWLLLV
Trigger: TACCAAGAGCAACCACAAAGACTCTTCCATTCCCAAGCAGAGAAGAGTAGAGGGGAAGGGCTCCAGAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CAA 90 bp CACAGTCTCTTTCTGCTTCACCCTTTCTCTTTTTGGCCAACTTGCTaGAGCTGTCTGAGCTCCTCTTCTCAGAGCTGTGCTTCTTCCCTG +
Preference number: 6 (lower is better)
Translates to: HSLFLLHPFSFWPTC*SCLSSSSQSCASSL
Trigger: CAGGGAAGAAGCACAGCTCTGAGAAGAGGAGCTCAGACAGCTCAAGCAAGTTGGCCAAAAAGAGAAAGGGTGAAGCAGAAAGAGACTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503369.1
ENST00000544085.6
ENST00000674009.1
CDS GCA 72 bp AATAGCCTTTACTGTTATTGCTGCTGCCATGAACCTTaGTGCTTCCTTGCGTCCGGGGAAGAGTTTGCTGGT +
Preference number: 6 (lower is better)
Translates to: NSLYCYCCCHEP*CFLASGEEFAG
Trigger: ACCAGCAAACTCTTCCCCGGACGCAAGGAAGCAGCAAGGTTCATGGCAGCAGCAATAACAGTAAAGGCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CCA 72 bp CATCTTTGGATTGTGGCTAATGTTGCCAACAGAAAGTaGTCCAGACGCAGGAGTGTGAATGGACTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: HLWIVANVANRK*SRRRSVNGLVV
Trigger: CACCACCAGTCCATTCACACTCCTGCGTCTGGACCACTTTCTGTTGGCAACATTAGCCACAATCCAAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CCA 72 bp GCTTTTGGCATGGAGACTTGGCATTGGTTCAGTTCTTaGCTGCGCCATCTTTGGATTGTGGCTAATGTTGCC +
Preference number: 6 (lower is better)
Translates to: AFGMETWHWFSS*LRHLWIVANVA
Trigger: GGCAACATTAGCCACAATCCAAAGATGGCGCAGCCAAGAACTGAACCAATGCCAAGTCTCCATGCCAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CAA 72 bp ACTGTTATTGCTGCTGCCATGAACCTTGCTGCTTCCTaGCGTCCGGGGAAGAGTTTGCTGGTTGGAATGTAT +
Preference number: 6 (lower is better)
Translates to: TVIAAAMNLAAS*RPGKSLLVGMY
Trigger: ATACATTCCAACCAGCAAACTCTTCCCCGGACGCAAGGAAGCAGCAAGGTTCATGGCAGCAGCAATAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS GCA 72 bp TTGGCATGGAGACTTGGCATTGGTTCAGTTCTTGGCTaGGCCATCTTTGGATTGTGGCTAATGTTGCCAACA +
Preference number: 6 (lower is better)
Translates to: LAWRLGIGSVLG*AIFGLWLMLPT
Trigger: TGTTGGCAACATTAGCCACAATCCAAAGATGGCGCAGCCAAGAACTGAACCAATGCCAAGTCTCCATGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CAA 72 bp TCTCTTTCTGCTTCACCCTTTCTCTTTTTGGCCAACTaGCTTGAGCTGTCTGAGCTCCTCTTCTCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: SLSASPFLFLAN*LELSELLFSEL
Trigger: CAGCTCTGAGAAGAGGAGCTCAGACAGCTCAAGCAAGTTGGCCAAAAAGAGAAAGGGTGAAGCAGAAAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503369.1
ENST00000544085.6
ENST00000674009.1
CDS CAA 72 bp AGTTACCATTTGGCAAAGAAGGCACTGGAAAAGGATTaGCAGTATCTCCGGAAGAACCCTTGTGCTCCGAGG +
Preference number: 6 (lower is better)
Translates to: SYHLAKKALEKD*QYLRKNPCAPR
Trigger: CCTCGGAGCACAAGGGTTCTTCCGGAGATACTGCAAATCCTTTTCCAGTGCCTTCTTTGCCAAATGGTAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CAA 90 bp GGAATCTTTTCAGGAAATGCCTCTTTCTCTTGGTGGGCTTCCTGGTaGCGTCTTTCCTTCTCTCTAATTCGAAGCAGGTTTCTGTCGTCA +
Preference number: 6 (lower is better)
Translates to: GIFSGNASFSWWASW*RLSFSLIRSRFLSS
Trigger: TGACGACAGAAACCTGCTTCGAATTAGAGAGAAGGAAAGACGCAACCAGGAAGCCCACCAAGAGAAAGAGGCATTTCCTGAAAAGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000507468.5
ENST00000511442.1
ENST00000544085.6
ENST00000674009.1
CDS CAA 90 bp GGTGTGCCTGTGCTTGCAATGCATGGAGAAGGTGCCTGGGCGACTTaGGAAGAACTCTCGAAGTGTTTATTAAGAGTACGAGAATACTTT +
Preference number: 6 (lower is better)
Translates to: GVPVLAMHGEGAWAT*EELSKCLLRVREYF
Trigger: AAAGTATTCTCGTACTCTTAATAAACACTTCGAGAGTTCTTCCAAAGTCGCCCAGGCACCTTCTCCATGCATTGCAAGCACAGGCACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307808.10
CDS TCA 72 bp TCTGCTCAACTGACTGAGAAGGCATCTTCAGTTTGGTaGGCTTGGCTTTGGCAGGCACTTTCAAGTCTGTTT +
Preference number: 6 (lower is better)
Translates to: SAQLTEKASSVW*AWLWQALSSLF
Trigger: AAACAGACTTGAAAGTGCCTGCCAAAGCCAAGCTCACCAAACTGAAGATGCCTTCTCAGTCAGTTGAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000544085.6
ENST00000674009.1
CDS TCA 72 bp ACACCTCAACTGACTGAGAAGGCATCTTCAGTTTGGTaGGCTTGGCTTTGGCAGGCACTTTCAAGTCTGTTT +
Preference number: 6 (lower is better)
Translates to: TPQLTEKASSVW*AWLWQALSSLF
Trigger: AAACAGACTTGAAAGTGCCTGCCAAAGCCAAGCTCACCAAACTGAAGATGCCTTCTCAGTCAGTTGAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504956.5
CDS TCA 72 bp AGGTCTCAACTGACTGAGAAGGCATCTTCAGTTTGGTaGGCTTGGCTTTGGCAGGCACTTTCAAGTCTGTTT +
Preference number: 6 (lower is better)
Translates to: RSQLTEKASSVW*AWLWQALSSLF
Trigger: AAACAGACTTGAAAGTGCCTGCCAAAGCCAAGCTCACCAAACTGAAGATGCCTTCTCAGTCAGTTGAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507468.5
CDS CCA 72 bp TATCATGGACTTTCACTGCTAGGTCCTTGGGAGATTTaGCTGGGCAATAGCCTTTACTGTTATTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: YHGLSLLGPWEI*LGNSLYCYCCC
Trigger: GCAGCAGCAATAACAGTAAAGGCTATTGCCCAGCCAAATCTCCCAAGGACCTAGCAGTGAAAGTCCATGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CCA 72 bp GATCTACAGTTTCTGAGTAGACAGAGTAAGCTGACTTaGATGACTGGCTTTCAGACTCTGTGGCAATTCCGC +
Preference number: 6 (lower is better)
Translates to: DLQFLSRQSKLT*MTGFQTLWQFR
Trigger: GCGGAATTGCCACAGAGTCTGAAAGCCAGTCATCCAAGTCAGCTTACTCTGTCTACTCAGAAACTGTAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CAA 72 bp TCAGGAAATGCCTCTTTCTCTTGGTGGGCTTCCTGGTaGCGTCTTTCCTTCTCTCTAATTCGAAGCAGGTTT +
Preference number: 6 (lower is better)
Translates to: SGNASFSWWASW*RLSFSLIRSRF
Trigger: AAACCTGCTTCGAATTAGAGAGAAGGAAAGACGCAACCAGGAAGCCCACCAAGAGAAAGAGGCATTTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000507468.5
ENST00000511442.1
ENST00000544085.6
ENST00000674009.1
CDS CAA 72 bp GTGCTTGCAATGCATGGAGAAGGTGCCTGGGCGACTTaGGAAGAACTCTCGAAGTGTTTATTAAGAGTACGA +
Preference number: 6 (lower is better)
Translates to: VLAMHGEGAWAT*EELSKCLLRVR
Trigger: TCGTACTCTTAATAAACACTTCGAGAGTTCTTCCAAAGTCGCCCAGGCACCTTCTCCATGCATTGCAAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307808.10
CDS CAA 90 bp TGGTGGACACTAGTGTGGAAGGAGCTGGATGGAATGCTGCTCCCTTaGTCAGGAATTAAAGGATATTTCGGCTTTCCCAACCTATTTTCA +
Preference number: 6 (lower is better)
Translates to: WWTLVWKELDGMLLP*SGIKGYFGFPNLFS
Trigger: TGAAAATAGGTTGGGAAAGCCGAAATATCCTTTAATTCCTGACAAAGGGAGCAGCATTCCATCCAGCTCCTTCCACACTAGTGTCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS TCA 72 bp ACTAGGCGTATGTATTGCTGTCAAAGGAGGCGGCCATaGATGGGTCATTTCCTTCAGAATCTCTTCAACACA +
Preference number: 6 (lower is better)
Translates to: TRRMYCCQRRRP*MGHFLQNLFNT
Trigger: TGTGTTGAAGAGATTCTGAAGGAAATGACCCATTCATGGCCGCCTCCTTTGACAGCAATACATACGCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000507468.5
ENST00000511722.5
ENST00000514970.2
ENST00000544085.6
ENST00000674009.1
CDS CCA 72 bp GGGTCTCTTTATCATGGACTTTCACTGCTAGGTCCTTaGGAGATTTGGCTGGGCAATAGCCTTTACTGTTAT +
Preference number: 6 (lower is better)
Translates to: GSLYHGLSLLGP*EIWLGNSLYCY
Trigger: ATAACAGTAAAGGCTATTGCCCAGCCAAATCTCCCAAGGACCTAGCAGTGAAAGTCCATGATAAAGAGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000544085.6
ENST00000674009.1
CDS CAA 72 bp CTTCTTGCAATGCATGGAGAAGGTGCCTGGGCGACTTaGGAAGAACTCTCGAAGTGTTTATTAAGAGTACGA +
Preference number: 6 (lower is better)
Translates to: LLAMHGEGAWAT*EELSKCLLRVR
Trigger: TCGTACTCTTAATAAACACTTCGAGAGTTCTTCCAAAGTCGCCCAGGCACCTTCTCCATGCATTGCAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395146.9
ENST00000544085.6
CDS CCA 72 bp TGCTTGTTGTTTGTCAAACTTCACTTGAGGCTTCCCTaGTTTAGAGTTACCATTTGGCAAAGAAGGCACTGG +
Preference number: 6 (lower is better)
Translates to: CLLFVKLHLRLP*FRVTIWQRRHW
Trigger: CCAGTGCCTTCTTTGCCAAATGGTAACTCTAAACCAGGGAAGCCTCAAGTGAAGTTTGACAAACAACAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CCA 72 bp AGTCCTTCAGAATCTCTTCAACACAATGGACTTCATTaGAGTAGGTCTGCTCAACTGACTGAGAAGGCATCT +
Preference number: 6 (lower is better)
Translates to: SPSESLQHNGLH*SRSAQLTEKAS
Trigger: AGATGCCTTCTCAGTCAGTTGAGCAGACCTACTCCAATGAAGTCCATTGTGTTGAAGAGATTCTGAAGGACT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503477.5
CDS CAA 72 bp CAGCTCATCACCTTTTGCTGTCTGTTGCCACTGCTGTaGACTCTTTCTGTAAATGCCATTGTTTCCAGTCAA +
Preference number: 6 (lower is better)
Translates to: QLITFCCLLPLL*TLSVNAIVSSQ
Trigger: TTGACTGGAAACAATGGCATTTACAGAAAGAGTCAACAGCAGTGGCAACAGACAGCAAAAGGTGATGAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504956.5
CDS CCA 72 bp TTTCCTTCAGAATCTCTTCAACACAATGGACTTCATTaGAGTAGGTCTGCTCAACTGACTGAGAAGGCATCT +
Preference number: 6 (lower is better)
Translates to: FPSESLQHNGLH*SRSAQLTEKAS
Trigger: AGATGCCTTCTCAGTCAGTTGAGCAGACCTACTCCAATGAAGTCCATTGTGTTGAAGAGATTCTGAAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CAA 72 bp CATGTGAAGGTCTGCTTGTTGTTTGTCAAACTTCACTaGAGGCTTCCCTGGTTTAGAGTTACCATTTGGCAA +
Preference number: 6 (lower is better)
Translates to: HVKVCLLFVKLH*RLPWFRVTIWQ
Trigger: TTGCCAAATGGTAACTCTAAACCAGGGAAGCCTCAAGTGAAGTTTGACAAACAACAAGCAGACCTTCACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307808.10
ENST00000395146.9
ENST00000544085.6
ENST00000674009.1
CDS CAA 72 bp TCCTCCGGACATTTTCATCTCAAATCCGTCTTCGAATaGGAATTCCCCAAGATAAGAAATTCCACACACCTC +
Preference number: 6 (lower is better)
Translates to: SSGHFHLKSVFE*EFPKIRNSTHL
Trigger: GAGGTGTGTGGAATTTCTTATCTTGGGGAATTCCAATTCGAAGACGGATTTGAGATGAAAATGTCCGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504956.5
CDS CAA 72 bp CACTTTATTTGCTCTTCTGCTAGAGCGTTTATCACATaGTTTCACAATCTGGCTGTGTGCTTATCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: HFICSSARAFIT*FHNLAVCLSAR
Trigger: CCTGGCAGATAAGCACACAGCCAGATTGTGAAACAATGTGATAAACGCTCTAGCAGAAGAGCAAATAAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511996.5
CDS GCA 72 bp TTGACTCTTTCTGTAAATGCCATTGTTTCCAGTCAATaGAAAGTGGCTAGTCTGTTCATCTTCCAGACCCTT +
Preference number: 6 (lower is better)
Translates to: LTLSVNAIVSSQ*KVASLFIFQTL
Trigger: AAGGGTCTGGAAGATGAACAGACTAGCCACTTTGCATTGACTGGAAACAATGGCATTTACAGAAAGAGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000395146.9
ENST00000503477.5
ENST00000504956.5
ENST00000507468.5
ENST00000511996.5
ENST00000674009.1
CDS GCA 72 bp TATCACATTGTTTCACAATCTGGCTGTGTGCTTATCTaGCAGGTTAAACAGAACAGGGACTCCCATTTTTCT +
Preference number: 6 (lower is better)
Translates to: YHIVSQSGCVLI*QVKQNRDSHFS
Trigger: AGAAAAATGGGAGTCCCTGTTCTGTTTAACCTGGCAGATAAGCACACAGCCAGATTGTGAAACAATGTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511996.5
CDS GCA 72 bp TTGACTCTTTCTGTAAATGCCATTGTTTCCAGTCAATaGAAAGTGGCTAGTCTGTTCATCTTCTACACACAC +
Preference number: 6 (lower is better)
Translates to: LTLSVNAIVSSQ*KVASLFIFYTH
Trigger: GTGTGTGTAGAAGATGAACAGACTAGCCACTTTGCATTGACTGGAAACAATGGCATTTACAGAAAGAGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511442.1
CDS CAA 90 bp GGACTCCCATTTTTCTATTCTCGTATTCTCTCCCATAGGTCATCTTaGATCTATCAGATTTTAAGGCATCATCTGACAGCAGATCTTCAA +
Preference number: 6 (lower is better)
Translates to: GLPFFYSRILSHRSS*IYQILRHHLTADLQ
Trigger: TTGAAGATCTGCTGTCAGATGATGCCTTAAAATCTGATAGATCAAAGATGACCTATGGGAGAGAATACGAGAATAGAAAAATGGGAGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511996.5
CDS CAA 72 bp TTTTTCTATTCTCGTATTCTCTCCCATAGGTCATCTTaGATCTATCAGATTTTAAGGCATCATCTGACAGCA +
Preference number: 6 (lower is better)
Translates to: FFYSRILSHRSS*IYQILRHHLTA
Trigger: TGCTGTCAGATGATGCCTTAAAATCTGATAGATCAAAGATGACCTATGGGAGAGAATACGAGAATAGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511996.5
CDS GCA 72 bp AATTTTGGCTCCATAAAAAGGTTCTCTAAACCTTTCTaGAAACTGCATTTCAATATCTATAATCAGTCGTCC +
Preference number: 6 (lower is better)
Translates to: NFGSIKRFSKPF*KLHFNIYNQSS
Trigger: GGACGACTGATTATAGATATTGAAATGCAGTTTGCAGAAAGGTTTAGAGAACCTTTTTATGGAGCCAAAATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504956.5