Pregenerated sensors for AFDN-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000198221Ensembl transcript IDs: ENST00000417244.1, ENST00000425438.1, ENST00000663809.1, ENST00000669546.2
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCGCGGGGAGCGCAGGGCCCTTCGGAGAGGGCGCTCCACCGGCCCTaGGCTCCGTACCTGTGCCGCCACGCCCACCGGTCCCCTGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: ARGAQGPSERALHRP*APYLCRHAHRSPAE Trigger: CTCAGCAGGGGACCGGTGGGCGTGGCGGCACAGGTACGGAGCGCAGGGCCGGTGGAGCGCCCTCTCCGAAGGGCCCTGCGCTCCCCGCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669546.2 |
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| CDS TCA 90 bp | CTAAGGAGACACACAAAGGGAGTGGGACCCTCCAACCTCACTCTGTaGGAGGAACACCGCACAGCAGTGTGGGGGCTCGAACACCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: LRRHTKGVGPSNLTL*EEHRTAVWGLEHPK Trigger: CTTGGGGTGTTCGAGCCCCCACACTGCTGTGCGGTGTTCCTCTCACAGAGTGAGGTTGGAGGGTCCCACTCCCTTTGTGTGTCTCCTTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669546.2 |
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| CDS TCA 90 bp | GTGTCCTCCGCGGAAGAAAACAGCTTGAAAAGGTCGGCTTTGAAGTaGCCCAGCGGAAAGGAATCACCCTGGAAGAAACACGCAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: VSSAEENSLKRSALK*PSGKESPWKKHAAA Trigger: GGCTGCTGCGTGTTTCTTCCAGGGTGATTCCTTTCCGCTGGGTCACTTCAAAGCCGACCTTTTCAAGCTGTTTTCTTCCGCGGAGGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669546.2 |
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| CDS GCA 90 bp | CACGTGTGGAACCCAATGAGAGTCCTTGCTGTGCAGGCACCGGGATaGTCACATAGTAAAAACTCGAGTCCATCGGGAAGCCCAGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: HVWNPMRVLAVQAPG*SHSKNSSPSGSPGK Trigger: CTTTCCTGGGCTTCCCGATGGACTCGAGTTTTTACTATGTGAGCATCCCGGTGCCTGCACAGCAAGGACTCTCATTGGGTTCCACACGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000663809.1 ENST00000669546.2 |
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| CDS CCA 90 bp | TTACAATCATGGCAGAAGGCAAAGGGGAAGCAGACATGTCTTACCTaGCTGGAACAGGAGGAAGCTGGGGAAGGGAGGTACCACACACTT | + |
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Preference number: 5 (lower is better) Translates to: LQSWQKAKGKQTCLT*LEQEEAGEGRYHTL Trigger: AAGTGTGTGGTACCTCCCTTCCCCAGCTTCCTCCTGTTCCAGCCAGGTAAGACATGTCTGCTTCCCCTTTGCCTTCTGCCATGATTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669546.2 |
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| CDS TCA 90 bp | CGCTTTTTGTTACAACACATCACAGATAACGCAACTTCGCCTGACTaGACCCGGCGTGGGGAGACTGCAGAGATGGCGCTAGGATTTAAA | + |
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Preference number: 5 (lower is better) Translates to: RFLLQHITDNATSPD*TRRGETAEMALGFK Trigger: TTTAAATCCTAGCGCCATCTCTGCAGTCTCCCCACGCCGGGTTCAGTCAGGCGAAGTTGCGTTATCTGTGATGTGTTGTAACAAAAAGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417244.1 |
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| CDS GCA 90 bp | GCTTCCCCTCGACGTTTATTAACTCTGCAGTCCGTTCTCTACGTCTaGGAAGAATTGGCAGATAACGATGTGTCTGAGAGAAGAGGCGTT | + |
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Preference number: 5 (lower is better) Translates to: ASPRRLLTLQSVLYV*EELADNDVSERRGV Trigger: AACGCCTCTTCTCTCAGACACATCGTTATCTGCCAATTCTTCGCAGACGTAGAGAACGGACTGCAGAGTTAATAAACGTCGAGGGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663809.1 ENST00000669546.2 |
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| CDS CCA 90 bp | AAAGGGGAAGCAGACATGTCTTACCTGGCTGGAACAGGAGGAAGCTaGGGAAGGGAGGTACCACACACTTTTAAACAACAAGATTTAGTG | + |
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Preference number: 5 (lower is better) Translates to: KGEADMSYLAGTGGS*GREVPHTFKQQDLV Trigger: CACTAAATCTTGTTGTTTAAAAGTGTGTGGTACCTCCCTTCCCCAGCTTCCTCCTGTTCCAGCCAGGTAAGACATGTCTGCTTCCCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669546.2 |
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| CDS GCA 90 bp | TGTCAGCCTGGAAATTTTCATGTCTTTGGACATCAGCAATCTAACTaGCGGCTTTGCAAACTCATTCTTCAAGAGGCAAGTCATTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: CQPGNFHVFGHQQSN*RLCKLILQEASHSW Trigger: CCAAGAATGACTTGCCTCTTGAAGAATGAGTTTGCAAAGCCGGCAGTTAGATTGCTGATGTCCAAAGACATGAAAATTTCCAGGCTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425438.1 |
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| CDS GCA 90 bp | TTTAGTGATGCTACACATACTTACTTTGGACATCAGCAATCTAACTaGCGGCTTTGCAAACTCATTCTTCAAGAGGCAAGTCATTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: FSDATHTYFGHQQSN*RLCKLILQEASHSW Trigger: CCAAGAATGACTTGCCTCTTGAAGAATGAGTTTGCAAAGCCGGCAGTTAGATTGCTGATGTCCAAAGTAAGTATGTGTAGCATCACTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663809.1 ENST00000669546.2 |
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| CDS TCA 90 bp | AAAATTAACATATGGCTCAGAATATCATCCTGGAGTCTTGACCGATaGCAGCGAAATTATTTGTCAGCCTGGAAATTTTCATGTCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: KINIWLRISSWSLDR*QRNYLSAWKFSCLW Trigger: CCAAAGACATGAAAATTTCCAGGCTGACAAATAATTTCGCTGTCATCGGTCAAGACTCCAGGATGATATTCTGAGCCATATGTTAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425438.1 |
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| CDS TCA 90 bp | AAAATTAACATATGGCTCAGAATATCATCCTGGAGTCTTGACCGATaGCAGCGAAATTATTTGTCAGCCTGGAAATTTTCATGTCCTAAA | + |
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Preference number: 5 (lower is better) Translates to: KINIWLRISSWSLDR*QRNYLSAWKFSCPK Trigger: TTTAGGACATGAAAATTTCCAGGCTGACAAATAATTTCGCTGTCATCGGTCAAGACTCCAGGATGATATTCTGAGCCATATGTTAATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000663809.1 ENST00000669546.2 |
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| CDS GCA 72 bp | GCGCAGGGCCCTTCGGAGAGGGCGCTCCACCGGCCCTaGGCTCCGTACCTGTGCCGCCACGCCCACCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: AQGPSERALHRP*APYLCRHAHRS Trigger: GGACCGGTGGGCGTGGCGGCACAGGTACGGAGCGCAGGGCCGGTGGAGCGCCCTCTCCGAAGGGCCCTGCGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669546.2 |
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| CDS TCA 72 bp | TGCGTCAGGGATCTGCGCAGCACGTGTGGAACCCAATaGGAGTCCTTGCTGTGCAGGCACCGGGATGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: CVRDLRSTCGTQ*ESLLCRHRDAH Trigger: GTGAGCATCCCGGTGCCTGCACAGCAAGGACTCTCATTGGGTTCCACACGTGCTGCGCAGATCCCTGACGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000425438.1 ENST00000663809.1 ENST00000669546.2 |
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| CDS TCA 72 bp | CACACAAAGGGAGTGGGACCCTCCAACCTCACTCTGTaGGAGGAACACCGCACAGCAGTGTGGGGGCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: HTKGVGPSNLTL*EEHRTAVWGLE Trigger: TTCGAGCCCCCACACTGCTGTGCGGTGTTCCTCTCACAGAGTGAGGTTGGAGGGTCCCACTCCCTTTGTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669546.2 |
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| CDS TCA 72 bp | GTCCTCAGGAATGAAGCTCCTGCAGTTGAGGTTCAGTaGACGCTGCGTCAGGGATCTGCGCAGCACGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: VLRNEAPAVEVQ*TLRQGSAQHVW Trigger: CCACACGTGCTGCGCAGATCCCTGACGCAGCGTTCACTGAACCTCAACTGCAGGAGCTTCATTCCTGAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000425438.1 ENST00000663809.1 ENST00000669546.2 |
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| CDS CCA 72 bp | TGGCAGAAGGCAAAGGGGAAGCAGACATGTCTTACCTaGCTGGAACAGGAGGAAGCTGGGGAAGGGAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: WQKAKGKQTCLT*LEQEEAGEGRY Trigger: GTACCTCCCTTCCCCAGCTTCCTCCTGTTCCAGCCAGGTAAGACATGTCTGCTTCCCCTTTGCCTTCTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669546.2 |
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| CDS CCA 72 bp | AGAAGGCAAAGGGGAAGCAGACATGTCTTACCTGGCTaGAACAGGAGGAAGCTGGGGAAGGGAGGTACCACA | + |
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Preference number: 6 (lower is better) Translates to: RRQRGSRHVLPG*NRRKLGKGGTT Trigger: TGTGGTACCTCCCTTCCCCAGCTTCCTCCTGTTCCAGCCAGGTAAGACATGTCTGCTTCCCCTTTGCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669546.2 |
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| CDS CAA 72 bp | TTGGTAACAGCGTCCTCAGGAATGAAGCTCCTGCAGTaGAGGTTCAGTGAACGCTGCGTCAGGGATCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: LVTASSGMKLLQ*RFSERCVRDLR Trigger: GCGCAGATCCCTGACGCAGCGTTCACTGAACCTCAACTGCAGGAGCTTCATTCCTGAGGACGCTGTTACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000425438.1 ENST00000663809.1 ENST00000669546.2 |
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| CDS TCA 72 bp | TTACAACACATCACAGATAACGCAACTTCGCCTGACTaGACCCGGCGTGGGGAGACTGCAGAGATGGCGCTA | + |
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Preference number: 6 (lower is better) Translates to: LQHITDNATSPD*TRRGETAEMAL Trigger: TAGCGCCATCTCTGCAGTCTCCCCACGCCGGGTTCAGTCAGGCGAAGTTGCGTTATCTGTGATGTGTTGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417244.1 |
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| CDS GCA 72 bp | AACCCAATGAGAGTCCTTGCTGTGCAGGCACCGGGATaGTCACATAGTAAAAACTCGAGTCCATCGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: NPMRVLAVQAPG*SHSKNSSPSGS Trigger: GCTTCCCGATGGACTCGAGTTTTTACTATGTGAGCATCCCGGTGCCTGCACAGCAAGGACTCTCATTGGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000663809.1 ENST00000669546.2 |
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| CDS CCA 72 bp | GCAGAGATGGCGCTAGGATTTAAAATGACGATCACGTaGCATCTCTCAGGGCCAAATGGGGCGCATCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: AEMALGFKMTIT*HLSGPNGAHQS Trigger: GCTTTGATGCGCCCCATTTGGCCCTGAGAGATGCCACGTGATCGTCATTTTAAATCCTAGCGCCATCTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417244.1 |
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| CDS CCA 72 bp | GGGAAGCCCAGGAAAGGATTTAAAATGACGATCACGTaGCATCTCTCAGGGCCAAATGGGGCGCATCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: GKPRKGFKMTIT*HLSGPNGAHQS Trigger: GCTTTGATGCGCCCCATTTGGCCCTGAGAGATGCCACGTGATCGTCATTTTAAATCCTTTCCTGGGCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000663809.1 ENST00000669546.2 |
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| CDS TCA 72 bp | ACACCCCAAGAGCGGCAGAGCGCGGTTCAGAAAACATaGCCCTTGAAATGCACACAAAGCCTAACAACGTGT | + |
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Preference number: 6 (lower is better) Translates to: TPQERQSAVQKT*PLKCTQSLTTC Trigger: ACACGTTGTTAGGCTTTGTGTGCATTTCAAGGGTCATGTTTTCTGAACCGCGCTCTGCCGCTCTTGGGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669546.2 |
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| CDS TCA 72 bp | GCGGAAGAAAACAGCTTGAAAAGGTCGGCTTTGAAGTaGCCCAGCGGAAAGGAATCACCCTGGAAGAAACAC | + |
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Preference number: 6 (lower is better) Translates to: AEENSLKRSALK*PSGKESPWKKH Trigger: GTGTTTCTTCCAGGGTGATTCCTTTCCGCTGGGTCACTTCAAAGCCGACCTTTTCAAGCTGTTTTCTTCCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669546.2 |
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| CDS CCA 72 bp | ATCCAATCACCTCCTCCTAGGCCCCATCTCCAACATTaGAGATTACAATCTGACATGAGATTCAGCTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: IQSPPPRPHLQH*RLQSDMRFSFG Trigger: GCCAAAGCTGAATCTCATGTCAGATTGTAATCTCCAATGTTGGAGATGGGGCCTAGGAGGAGGTGATTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669546.2 |
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| CDS CAA 72 bp | TTAACTCTGCAGTCCGTTCTCTACGTCTGCGAAGAATaGGCAGATAACGATGTGTCTGAGAGAAGAGGCGTT | + |
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Preference number: 6 (lower is better) Translates to: LTLQSVLYVCEE*ADNDVSERRGV Trigger: AACGCCTCTTCTCTCAGACACATCGTTATCTGCCAATTCTTCGCAGACGTAGAGAACGGACTGCAGAGTTAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663809.1 ENST00000669546.2 |
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| CDS GCA 72 bp | CGACGTTTATTAACTCTGCAGTCCGTTCTCTACGTCTaGGAAGAATTGGCAGATAACGATGTGTCTGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: RRLLTLQSVLYV*EELADNDVSER Trigger: TCTCTCAGACACATCGTTATCTGCCAATTCTTCGCAGACGTAGAGAACGGACTGCAGAGTTAATAAACGTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663809.1 ENST00000669546.2 |
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| CDS GCA 72 bp | ACTTACTTTGGACATCAGCAATCTAACTGCCGGCTTTaGAAACTCATTCTTCAAGAGGCAAGTCATTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: TYFGHQQSNCRL*KLILQEASHSW Trigger: CCAAGAATGACTTGCCTCTTGAAGAATGAGTTTGCAAAGCCGGCAGTTAGATTGCTGATGTCCAAAGTAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663809.1 ENST00000669546.2 |
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| CDS GCA 72 bp | GCTACACATACTTACTTTGGACATCAGCAATCTAACTaGCGGCTTTGCAAACTCATTCTTCAAGAGGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: ATHTYFGHQQSN*RLCKLILQEAS Trigger: ACTTGCCTCTTGAAGAATGAGTTTGCAAAGCCGGCAGTTAGATTGCTGATGTCCAAAGTAAGTATGTGTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663809.1 ENST00000669546.2 |
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| CDS CAA 90 bp | CCGATGACAGCGAAATTATTTGTCAGCCTGGAAATTTTCATGTCTTaGGACATCAGCAATCTAACTGCCGGCTTTGCAAACTCATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PMTAKLFVSLEIFMS*DISNLTAGFANSFF Trigger: GAAGAATGAGTTTGCAAAGCCGGCAGTTAGATTGCTGATGTCCAAAGACATGAAAATTTCCAGGCTGACAAATAATTTCGCTGTCATCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425438.1 |
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| CDS CAA 90 bp | CCTCGCCCAGTGCAGGTTTGTTTAGCTTCAGTCCAGTCCTTTATCTaGCATTTCAGTCTCACCATGTATAAAATGGAATTAATAACAGAA | + |
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Preference number: 6 (lower is better) Translates to: PRPVQVCLASVQSFI*HFSLTMYKMELITE Trigger: TTCTGTTATTAATTCCATTTTATACATGGTGAGACTGAAATGCAAGATAAAGGACTGGACTGAAGCTAAACAAACCTGCACTGGGCGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663809.1 ENST00000669546.2 |
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| CDS TCA 72 bp | ATATGGCTCAGAATATCATCCTGGAGTCTTGACCGATaGCAGCGAAATTATTTGTCAGCCTGGAAATTTTCA | + |
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Preference number: 6 (lower is better) Translates to: IWLRISSWSLDR*QRNYLSAWKFS Trigger: TGAAAATTTCCAGGCTGACAAATAATTTCGCTGTCATCGGTCAAGACTCCAGGATGATATTCTGAGCCATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000425438.1 ENST00000663809.1 ENST00000669546.2 |
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