RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AFAP1L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000157510

Ensembl transcript IDs: ENST00000296721.9, ENST00000455574.6, ENST00000508444.1, ENST00000513665.1, ENST00000515000.1, ENST00000522492.1

Found 396 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTCTCTTTACACTGCACCACCAATGCTTCAGCACTGCCTCCCTTTaGCTTAAGGACTGGGAGTGCGATGCTGTGAATGGGATGGAAGGG +
Preference number: 1 (lower is better)
Translates to: CLFTLHHQCFSTASL*LKDWECDAVNGMEG
Trigger: CCCTTCCATCCCATTCACAGCATCGCACTCCCAGTCCTTAAGGCAAAGGGAGGCAGTGCTGAAGCATTGGTGGTGCAGTGTAAAGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR GCA 90 bp TGTGATCAGATGATCAGGTCTTGTCTCTTTACACTGCACCACCAATaGTTCAGCACTGCCTCCCTTTGCCTTAAGGACTGGGAGTGCGAT +
Preference number: 1 (lower is better)
Translates to: CDQMIRSCLFTLHHQ*FSTASLCLKDWECD
Trigger: ATCGCACTCCCAGTCCTTAAGGCAAAGGGAGGCAGTGCTGAAGCATTGGTGGTGCAGTGTAAAGAGACAAGACCTGATCATCTGATCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR TCA 90 bp GACTACAGGCGAGTACCACCATGCCTGGCTAATGAGAGCCACTATTaGCTGAGCATTTCTTATTTCTCAGACACTATGCAAGATGCCTAC +
Preference number: 1 (lower is better)
Translates to: DYRRVPPCLANESHY*LSISYFSDTMQDAY
Trigger: GTAGGCATCTTGCATAGTGTCTGAGAAATAAGAAATGCTCAGTCAATAGTGGCTCTCATTAGCCAGGCATGGTGGTACTCGCCTGTAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR TCA 90 bp ACCTATGCAAGATCCCGCAATAAGGAAACAGTGACAGTAGAATTCTaGCAGACTGAACACTTGGCAGTGTTGGGCTTAGACCTGTGGCTT +
Preference number: 1 (lower is better)
Translates to: TYARSRNKETVTVEF*QTEHLAVLGLDLWL
Trigger: AAGCCACAGGTCTAAGCCCAACACTGCCAAGTGTTCAGTCTGTCAGAATTCTACTGTCACTGTTTCCTTATTGCGGGATCTTGCATAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR GCA 90 bp AAGTGGCATCTGTGCCTTAGCCATTTTGCTTACATTTCTCCTAGCTaGCTAACGTTCACCAGGTTGCTGCTTGCATCCATGCATTCATTC +
Preference number: 1 (lower is better)
Translates to: KWHLCLSHFAYISPS*LTFTRLLLASMHSF
Trigger: GAATGAATGCATGGATGCAAGCAGCAACCTGGTGAACGTTAGGCAGCTAGGAGAAATGTAAGCAAAATGGCTAAGGCACAGATGCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR TCA 90 bp ACAGGCGAGTACCACCATGCCTGGCTAATGAGAGCCACTATTGACTaGGCATTTCTTATTTCTCAGACACTATGCAAGATGCCTACTATA +
Preference number: 1 (lower is better)
Translates to: TGEYHHAWLMRATID*AFLISQTLCKMPTI
Trigger: TATAGTAGGCATCTTGCATAGTGTCTGAGAAATAAGAAATGCTCAGTCAATAGTGGCTCTCATTAGCCAGGCATGGTGGTACTCGCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR CCA 90 bp CACCATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTaGCATCTGTGCCTTAGCCATTTTGCTTACATTTCTCCTAGCTGC +
Preference number: 1 (lower is better)
Translates to: HHTWPKQGILTTKNK*HLCLSHFAYISPSC
Trigger: GCAGCTAGGAGAAATGTAAGCAAAATGGCTAAGGCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR GCA 90 bp TGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTaGCTTAGCCATTTTGCTTACATTTCTCCTAGCTGCCTAACGTTC +
Preference number: 1 (lower is better)
Translates to: WPKQGILTTKNKWHL*LSHFAYISPSCLTF
Trigger: GAACGTTAGGCAGCTAGGAGAAATGTAAGCAAAATGGCTAAGGCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR TCA 90 bp TTAGTAATGCCCAATATGAATCAAGTTGGCACAAGTGTGATCAGATaGTCAGGTCTTGTCTCTTTACACTGCACCACCAATGCTTCAGCA +
Preference number: 1 (lower is better)
Translates to: LVMPNMNQVGTSVIR*SGLVSLHCTTNASA
Trigger: TGCTGAAGCATTGGTGGTGCAGTGTAAAGAGACAAGACCTGATCATCTGATCACACTTGTGCCAACTTGATTCATATTGGGCATTACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR TCA 90 bp TATGCAGGCAGGGATAATGTTATTGATTGTTCAACCTATTTACCTTaGCCAGGGGTTGTTAGTAATGCCCAATATGAATCAAGTTGGCAC +
Preference number: 1 (lower is better)
Translates to: YAGRDNVIDCSTYLP*PGVVSNAQYESSWH
Trigger: GTGCCAACTTGATTCATATTGGGCATTACTAACAACCCCTGGTCAAGGTAAATAGGTTGAACAATCAATAACATTATCCCTGCCTGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR CCA 90 bp GGGAATGGGAAGTGTTCCTTGAGCACTCTGAATCTTGTCATAACATaGGTTATTTGTACTGTAGTTATTTGGGTCACATTTTCTTTCCTG +
Preference number: 1 (lower is better)
Translates to: GNGKCSLSTLNLVIT*VICTVVIWVTFSFL
Trigger: CAGGAAAGAAAATGTGACCCAAATAACTACAGTACAAATAACCCATGTTATGACAAGATTCAGAGTGCTCAAGGAACACTTCCCATTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR GCA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCGGACTGGGAGTGCGATaGTGTGAATGGGATGGAAGG +
Preference number: 2 (lower is better)
Translates to: KNRALLSMGPCVTAQVACGLGVR*CEWDGR
Trigger: CCTTCCATCCCATTCACAGCATCGCACTCCCAGTCC...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR CCA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCGAGTACCACCATGCCTaGCTAATGAGAGCCACTATT +
Preference number: 2 (lower is better)
Translates to: KNRALLSMGPCVTAQVACEYHHA*LMRATI
Trigger: AATAGTGGCTCTCATTAGCCAGGCATGGTGGTACTC...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR CCA 90 bp CATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTGCCCAAGGTCACCCAGCTaGTCATTAGAGGCATGGCTC +
Preference number: 2 (lower is better)
Translates to: HTWPKQGILTTKNKWHLCPRSPS*SLEAWL
Trigger: GAGCCATGCCTCTAATGACCAGCTGGGTGACCTTGG...GCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR GCA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGGGGGCCCTGTGTGACTaGACAGGTTGCATGCCTGTG +
Preference number: 2 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGGALCD*TGCMPV
Trigger: CACAGGCATGCAACCTGTGCAGTCACACAGGGCCCC...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR GCA 90 bp CTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATGGGAGCTAGCACTGCCTCCCTTTaGCTTAAGGACTGGGAGTGC +
Preference number: 2 (lower is better)
Translates to: LIFTCWLHQHVNIRTMGASTASL*LKDWEC
Trigger: GCACTCCCAGTCCTTAAGGCAAAGGGAGGCAGTGCT...AGCTCCCATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR GCA 90 bp CTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATGGGAGCTTTGCTTAGGCTGGAGTaGAGTGGCAATTCACAGGCG +
Preference number: 2 (lower is better)
Translates to: LIFTCWLHQHVNIRTMGALLRLE*SGNSQA
Trigger: CGCCTGTGAATTGCCACTGCACTCCAGCCTAAGCAA...AGCTCCCATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR CCA 90 bp AACATCCTGTGGACATTAGAGCTCTGTGCTCCTGTCACTGAGTATCACTGTGAGCTCAGGTGGACAAGCTaGTATTTCCTTTGGAATGAA +
Preference number: 2 (lower is better)
Translates to: NILWTLELCAPVTEYHCELRWTS*YFLWNE
Trigger: TTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAG...CTCACAGTGATACTCAGTGACAGGAGCACAGAGCTCTAATGTCCACAGGATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR CCA 90 bp CATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTGCCTTTGCCTTAAGGACTaGGAGTGCGATGCTGTGAAT +
Preference number: 2 (lower is better)
Translates to: HTWPKQGILTTKNKWHLCLCLKD*ECDAVN
Trigger: ATTCACAGCATCGCACTCCCAGTCCTTAAGGCAAAG...GCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR GCA 90 bp CAGACTTCTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATGGCTGGTATTTTGGGTaGCCTGGAGAACGAGGGCTA +
Preference number: 2 (lower is better)
Translates to: QTSYIHMLAPPACKYKNYGWYFG*PGERGL
Trigger: TAGCCCTCGTTCTCCAGGGCACCCAAAATACCAGCC...ATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAGAAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR CCA 90 bp AACATCCTGTGGACATTAGAGCTCTGTGCTCCTGTCACTGAGTATCACTGTGAGAGCTGGTATTTCCTTTaGAATGAAATCCTCATCCTC +
Preference number: 2 (lower is better)
Translates to: NILWTLELCAPVTEYHCESWYFL*NEILIL
Trigger: GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCT...CTCACAGTGATACTCAGTGACAGGAGCACAGAGCTCTAATGTCCACAGGATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR TCA 90 bp CATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTGCGAGGGTGATAAAGTTTaGGTGAGGCTAAAGTCTGTA +
Preference number: 2 (lower is better)
Translates to: HTWPKQGILTTKNKWHLCEGDKV*VRLKSV
Trigger: TACAGACTTTAGCCTCACTCAAACTTTATCACCCTC...GCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR CCA 90 bp AACATCCTGTGGACATTAGAGCTCTGTGCTCCTGTCACTGAGTATCACTGTGAGCAATATGAATCAAGTTaGCACAAGTGTGATCAGATG +
Preference number: 2 (lower is better)
Translates to: NILWTLELCAPVTEYHCEQYESS*HKCDQM
Trigger: CATCTGATCACACTTGTGCCAACTTGATTCATATTG...CTCACAGTGATACTCAGTGACAGGAGCACAGAGCTCTAATGTCCACAGGATGTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR CAA 90 bp AGCCATTTTGCTTACATTTCTCCTAGCTGCCTAACGTTCACCAGGTaGCTGCTTGCATCCATGCATTCATTCGTCTATTTATTAAGTGCT +
Preference number: 2 (lower is better)
Translates to: SHFAYISPSCLTFTR*LLASMHSFVYLLSA
Trigger: AGCACTTAATAAATAGACGAATGAATGCATGGATGCAAGCAGCAACCTGGTGAACGTTAGGCAGCTAGGAGAAATGTAAGCAAAATGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR TCA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGATCAGAGCAATCAAGTaGCTTTCCCAAGGTCACCCA +
Preference number: 2 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGIRAIK*LSQGHP
Trigger: TGGGTGACCTTGGGAAAGTCACTTGATTGCTCTGAT...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR GCA 90 bp CTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATGGGAGCTTCAGGTTATTTTTCCTaGTGTGGTCTCCAGCTACCT +
Preference number: 2 (lower is better)
Translates to: LIFTCWLHQHVNIRTMGASGYFS*CGLQLP
Trigger: AGGTAGCTGGAGACCACAGCAGGAAAAATAACCTGA...AGCTCCCATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR TCA 90 bp CATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTGCAATGAGAGCCACTATTaGCTGAGCATTTCTTATTTC +
Preference number: 2 (lower is better)
Translates to: HTWPKQGILTTKNKWHLCNESHY*LSISYF
Trigger: GAAATAAGAAATGCTCAGTCAATAGTGGCTCTCATT...GCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR TCA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGGAGTTCATCTGTTGGTaGGAAAAGACACTTAACCCC +
Preference number: 2 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGEFICW*EKTLNP
Trigger: GGGGTTAAGTGTCTTTTCTCACCAACAGATGAACTC...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR CAA 90 bp GAAGTGTTCCTTGAGCACTCTGAATCTTGTCATAACATGGGTTATTaGTACTGTAGTTATTTGGGTCACATTTTCTTTCCTGCTTGTCTC +
Preference number: 2 (lower is better)
Translates to: EVFLEHSESCHNMGY*YCSYLGHIFFPACL
Trigger: GAGACAAGCAGGAAAGAAAATGTGACCCAAATAACTACAGTACAAATAACCCATGTTATGACAAGATTCAGAGTGCTCAAGGAACACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR GCA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGGAAGATTCCAGTAGCTaGACTCTGTCTAAAGCATAT +
Preference number: 2 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGEDSSS*TLSKAY
Trigger: ATATGCTTTAGACAGAGTGCAGCTACTGGAATCTTC...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR CAA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCTCAGATGATCAGGTCTaGTCTCTTTACACTGCACCA +
Preference number: 3 (lower is better)
Translates to: KNRALLSMGPCVTAQVACSDDQV*SLYTAP
Trigger: TGGTGCAGTGTAAAGAGACAAGACCTGATCATCTGA...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR CAA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCTACCTTGACCAGGGGTaGTTAGTAATGCCCAATATG +
Preference number: 3 (lower is better)
Translates to: KNRALLSMGPCVTAQVACYLDQG*LVMPNM
Trigger: CATATTGGGCATTACTAACAACCCCTGGTCAAGGTA...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR CCA 72 bp ACTTTCCCAAGGTCACCCAGCTGGTCATTAGAGGCATaGCTCAAACCTAGCCCTATCTGGATCTGGGCTTAT +
Preference number: 3 (lower is better)
Translates to: TFPRSPSWSLEA*LKPSPIWIWAY
Trigger: ATAAGCCCAGATCCAGATAGGGCTAGGTTTGAGCCATGCCTCTAATGACCAGCTGGGTGACCTTGGGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR TCA 72 bp GTAGTGAGTAGCACAGTAAGGAGACTGCCCAGGACTTaGGGTCCTTGGTCCCTCTATAGAAGTATCAAGTGT +
Preference number: 3 (lower is better)
Translates to: VVSSTVRRLPRT*GPWSLYRSIKC
Trigger: ACACTTGATACTTCTATAGAGGGACCAAGGACCTCAAGTCCTGGGCAGTCTCCTTACTGTGCTACTCACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR CAA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGGAGACTGCCCAGGACTaGAGGTCCTTGGTCCCTCTA +
Preference number: 3 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGETAQD*RSLVPL
Trigger: TAGAGGGACCAAGGACCTCAAGTCCTGGGCAGTCTC...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR TCA 72 bp CGAGTACCACCATGCCTGGCTAATGAGAGCCACTATTaGCTGAGCATTTCTTATTTCTCAGACACTATGCAA +
Preference number: 3 (lower is better)
Translates to: RVPPCLANESHY*LSISYFSDTMQ
Trigger: TTGCATAGTGTCTGAGAAATAAGAAATGCTCAGTCAATAGTGGCTCTCATTAGCCAGGCATGGTGGTACTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR-3UTR CAA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGATAAAGGCTGGTATTTaGGGTGCCCTGGAGAACGAG +
Preference number: 3 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGIKAGI*GALENE
Trigger: CTCGTTCTCCAGGGCACCCAAAATACCAGCCTTTAT...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR TCA 72 bp CCCAATATGAATCAAGTTGGCACAAGTGTGATCAGATaGTCAGGTCTTGTCTCTTTACACTGCACCACCAAT +
Preference number: 3 (lower is better)
Translates to: PNMNQVGTSVIR*SGLVSLHCTTN
Trigger: ATTGGTGGTGCAGTGTAAAGAGACAAGACCTGATCATCTGATCACACTTGTGCCAACTTGATTCATATTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR TCA 72 bp TACCACCATGCCTGGCTAATGAGAGCCACTATTGACTaGGCATTTCTTATTTCTCAGACACTATGCAAGATG +
Preference number: 3 (lower is better)
Translates to: YHHAWLMRATID*AFLISQTLCKM
Trigger: CATCTTGCATAGTGTCTGAGAAATAAGAAATGCTCAGTCAATAGTGGCTCTCATTAGCCAGGCATGGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR GCA 72 bp CAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTaGCTTAGCCATTTTGCTTACATTTCTCCTAGCTGC +
Preference number: 3 (lower is better)
Translates to: QGILTTKNKWHL*LSHFAYISPSC
Trigger: GCAGCTAGGAGAAATGTAAGCAAAATGGCTAAGGCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR GCA 72 bp TCACTGAGTATCACTGTGAGCTTAAAATATGTCAGCTaGTCCATTTCTCTTTCCTTTTGTGTATTCAGAGCT +
Preference number: 3 (lower is better)
Translates to: SLSITVSLKYVS*SISLSFCVFRA
Trigger: AGCTCTGAATACACAAAAGGAAAGAGAAATGGAGCAGCTGACATATTTTAAGCTCACAGTGATACTCAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCAGCTCGTGCCTCTTGTaGCGGCTGTCCTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: KNRALLSMGPCVTAQVACSSCLL*RLSLGT
Trigger: CGTGCCCAAGGACAGCCGGCACAAGAGGCACGAGCT...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCCGCAGCCCTGCTCATTaGGCCCTTCAGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KNRALLSMGPCVTAQVACRSPAH*ALQFCQ
Trigger: CTGGCAGAACTGAAGGGCTCAATGAGCAGGGCTGCG...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCCCTTGGGCACGTAGATaGTGCTGCAGGTATCCAGTG +
Preference number: 4 (lower is better)
Translates to: KNRALLSMGPCVTAQVACPWARR*CCRYPV
Trigger: CACTGGATACCTGCAGCATCATCTACGTGCCCAAGG...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCAGTTGCGCCCAGCACTaGCGATGCTGGTTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: KNRALLSMGPCVTAQVACSCAQH*RCWLRS
Trigger: AGACCTTAACCAGCATCGTCAGTGCTGGGCGCAACT...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp AACATCCTGTGGACATTAGAGCTCTGTGCTCCTGTCACTGAGTATCACTGTGAGCTGCAGGAGGAGGCGTaGCGCTTCACCTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: NILWTLELCAPVTEYHCELQEEA*RFTWAP
Trigger: AGGGGCCCAGGTGAAGCGTCACGCCTCCTCCTGCAG...CTCACAGTGATACTCAGTGACAGGAGCACAGAGCTCTAATGTCCACAGGATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCGGCTGGTATTTTGGGTaGCCTGGAGAACGAGGGCTA +
Preference number: 4 (lower is better)
Translates to: KNRALLSMGPCVTAQVACGWYFG*PGERGL
Trigger: TAGCCCTCGTTCTCCAGGGCACCCAAAATACCAGCC...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCTTGCTTAGGCTGGAGTaGAGTGGCAATTCACAGGCG +
Preference number: 4 (lower is better)
Translates to: KNRALLSMGPCVTAQVACLLRLE*SGNSQA
Trigger: CGCCTGTGAATTGCCACTGCACTCCAGCCTAAGCAA...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCAGGGAGAGGTTGCTCTaGAACGCTGTTCTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: KNRALLSMGPCVTAQVACRERLL*NAVLGF
Trigger: AAACCCCAGAACAGCGTTCCAGAGCAACCTCTCCCT...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCGTATTTTGGGTGCCCTaGAGAACGAGGGCTACTTCC +
Preference number: 4 (lower is better)
Translates to: KNRALLSMGPCVTAQVACVFWVP*RTRATS
Trigger: GGAAGTAGCCCTCGTTCTCCAGGGCACCCAAAATAC...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp CATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTGCAGGGGCTGCAGGCTCTaGAGGATGGAGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: HTWPKQGILTTKNKWHLCRGCRL*RMEATA
Trigger: GGCCGTGGCCTCCATCCTGCAGAGCCTGCAGCCCCT...GCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTAGGGGCTGCAGGCTCTaGAGGATGGAGGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSRGCRL*RMEATA
Trigger: GGCCGTGGCCTCCATCCTGCAGAGCCTGCAGCCCCT...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTCAGGGCTGGCCCTCCTaGCAGGGACTGCTGCAAGCG +
Preference number: 4 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSQGWPS*QGLLQA
Trigger: CGCTTGCAGCAGTCCCTGGCAGGAGGGCCAGCCCTG...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp AACATCCTGTGGACATTAGAGCTCTGTGCTCCTGTCACTGAGTATCACTGTGAGTGGCTAGCTCAGGGCTaGCTCCTTTGCTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: NILWTLELCAPVTEYHCEWLAQG*LLCWAP
Trigger: GGGAGCCCAGCAAAGGAGCCAGCCCTGAGCTAGCCA...CTCACAGTGATACTCAGTGACAGGAGCACAGAGCTCTAATGTCCACAGGATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AACATCCTGTGGACATTAGAGCTCTGTGCTCCTGTCACTGAGTATCACTGTGAGACCTCGGTAGCCCCCTaGGTGAAACGCAGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: NILWTLELCAPVTEYHCETSVAP*VKRSSC
Trigger: GCACGAGCTGCGTTTCACCCAGGGGGCTACCGAGGT...CTCACAGTGATACTCAGTGACAGGAGCACAGAGCTCTAATGTCCACAGGATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCTCACCTGGGCCCCTGTaGGGCGCTCGGGCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILSPGPL*GARAPR
Trigger: ACGAGGAGCCCGAGCGCCCCACAGGGGCCCAGGTGA...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTGCAGCGCCTCCGGAGTaGCTCTGGAGCCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSAAPPE*LWSPSP
Trigger: TGGAGATGGGCTCCAGAGTCACTCCGGAGGCGCTGC...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCCTGCAGGAGGAGGCGTaGCGCTTCACCTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSLQEEA*RFTWAP
Trigger: AGGGGCCCAGGTGAAGCGTCACGCCTCCTCCTGCAG...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCCTTCTCCTGTCTCAGTaGTATCAGCTCTGTCCGAAT +
Preference number: 4 (lower is better)
Translates to: KNRALLSMGPCVTAQVACLLLSQ*YQLCPN
Trigger: ATTCGGACAGAGCTGATAGCACTGAGACAGGAGAAG...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp AACATCCTGTGGACATTAGAGCTCTGTGCTCCTGTCACTGAGTATCACTGTGAGCTCAAGCGGTCCTCCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: NILWTLELCAPVTEYHCELKRSS*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGGAGGACCGCTTGAG...CTCACAGTGATACTCAGTGACAGGAGCACAGAGCTCTAATGTCCACAGGATGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCAGCTGCTCCAGCACCTaGCCTCGGTCCATGGCGCCG +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILISCSST*PRSMAP
Trigger: CGGCGCCATGGACCGAGGCCAGGTGCTGGAGCAGCT...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTCTTGTTGGGGAGCGGTaGAGGCAGGTCGGCCGCGTT +
Preference number: 4 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSLVGER*RQVGRV
Trigger: AACGCGGCCGACCTGCCTCCACCGCTCCCCAACAAG...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCTCCTCTGAGGGCCACTaGTGTCGGGGCTGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILISSEGH*CRGCGL
Trigger: GAGCCCGCAGCCCCGACACCAGTGGCCCTCAGAGGA...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp CTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATGGGAGCTTCACCTGGGCCCCTGTaGGGCGCTCGGGCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LIFTCWLHQHVNIRTMGASPGPL*GARAPR
Trigger: ACGAGGAGCCCGAGCGCCCCACAGGGGCCCAGGTGA...AGCTCCCATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCGTGCGATGCTGTGAATaGGATGGAAGGGGTTATTCA +
Preference number: 4 (lower is better)
Translates to: KNRALLSMGPCVTAQVACVRCCE*DGRGYS
Trigger: TGAATAACCCCTTCCATCCCATTCACAGCATCGCAC...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTTCCTTTGCCCGACACTaGGCTTCCAGGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSSFARH*ASRVAT
Trigger: CGTGGCCACCCTGGAAGCTCAGTGTCGGGCAAAGGA...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCAAGTTGGCACAAGTGTaGTCAGATGATCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: KNRALLSMGPCVTAQVACKLAQV*SDDQVL
Trigger: CAAGACCTGATCATCTGATCACACTTGTGCCAACTT...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCAGCCACTCCTCGGCCTaGTCTCGGCTCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILSHSSA*SRLCSA
Trigger: GGCACTGCAGAGCCGAGAGCAGGCCGAGGAGTGGCT...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCCCTGCCAGGGACTGCTaGAAGCGCTCCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILPARDC*KRSFTA
Trigger: GGCTGTGAAGGAGCGCTTGCAGCAGTCCCTGGCAGG...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCCAGGGCTGGCCCTCCTaGCAGGGACTGCTGCAAGCG +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSQGWPS*QGLLQA
Trigger: CGCTTGCAGCAGTCCCTGGCAGGAGGGCCAGCCCTG...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCCAGCCCGGTGAGCTCTaGGAGCAGCTGCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILQPGEL*EQLLQH
Trigger: GTGCTGGAGCAGCTGCTCCCAGAGCTCACCGGGCTG...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTCAGGCGTGGGCTCTTaGCTAGCTCAGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILSGVGS*LAQGWL
Trigger: GAGCCAGCCCTGAGCTAGCCAAGAGCCCACGCCTGA...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCCTTGTTGGGGAGCGGTaGAGGCAGGTCGGCCGCGTT +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSLVGER*RQVGRV
Trigger: AACGCGGCCGACCTGCCTCCACCGCTCCCCAACAAG...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp AACATCCTGTGGACATTAGAGCTCTGTGCTCCTGTCACTGAGTATCACTGTGAGGGGCTGCAGCCATTGTaGGAGCTGATGTACTCAGGC +
Preference number: 4 (lower is better)
Translates to: NILWTLELCAPVTEYHCEGLQPL*ELMYSG
Trigger: GCCTGAGTACATCAGCTCCCACAATGGCTGCAGCCC...CTCACAGTGATACTCAGTGACAGGAGCACAGAGCTCTAATGTCCACAGGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCCTCTGAGGGCCACTaGTGTCGGGGCTGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSSSEGH*CRGCGL
Trigger: GAGCCCGCAGCCCCGACACCAGTGGCCCTCAGAGGA...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp CATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTGCGGAGGACTGGGGATCTaGGGACCTCCACTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: HTWPKQGILTTKNKWHLCGGLGI*GPPLPQ
Trigger: CTGAGGGAGTGGAGGTCCCCAGATCCCCAGTCCTCC...GCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AACATCCTGTGGACATTAGAGCTCTGTGCTCCTGTCACTGAGTATCACTGTGAGAGCCTTGCAGGGCGATaGCGTTCACATGGGTTCGCA +
Preference number: 4 (lower is better)
Translates to: NILWTLELCAPVTEYHCESLAGR*RSHGFA
Trigger: TGCGAACCCATGTGAACGCCATCGCCCTGCAAGGCT...CTCACAGTGATACTCAGTGACAGGAGCACAGAGCTCTAATGTCCACAGGATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AACATCCTGTGGACATTAGAGCTCTGTGCTCCTGTCACTGAGTATCACTGTGAGTGCGGGTCCACACGATaGGACTTCTCACTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: NILWTLELCAPVTEYHCECGSTR*DFSLQE
Trigger: CTCCTGCAGTGAGAAGTCCCATCGTGTGGACCCGCA...CTCACAGTGATACTCAGTGACAGGAGCACAGAGCTCTAATGTCCACAGGATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTCCAGGGTGGTATCGCTaGGGTACTCGTGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSPGWYR*GTRGPG
Trigger: TCCTGGACCACGAGTACCTCAGCGATACCACCCTGG...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTCGCAGCCCTGCTCATTaGGCCCTTCAGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSRSPAH*ALQFCQ
Trigger: CTGGCAGAACTGAAGGGCTCAATGAGCAGGGCTGCG...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCTCCTTTGCCCGACACTaGGCTTCCAGGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILSFARH*ASRVAT
Trigger: CGTGGCCACCCTGGAAGCTCAGTGTCGGGCAAAGGA...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCGCATGGGGCCCTGTGTaGCTGCACAGGTTGCATGCC +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSAWGPV*LHRLHA
Trigger: GGCATGCAACCTGTGCAGTCACACAGGGCCCCATGC...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTGTACTCAGGCGACTTaGCGGGTCCCAGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILCTQAT*RVPEEG
Trigger: CCCTTCCTCTGGGACCCGGCAAGTCGCCTGAGTACA...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTTGTACTCAGGCGACTTaGCGGGTCCCAGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSCTQAT*RVPEEG
Trigger: CCCTTCCTCTGGGACCCGGCAAGTCGCCTGAGTACA...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCAGCTCGTGCCTCTTGTaGCGGCTGTCCTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILSSCLL*RLSLGT
Trigger: CGTGCCCAAGGACAGCCGGCACAAGAGGCACGAGCT...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTCTCTCGGCTCTGCAGTaGCAGCACCAAGACCTCGGT +
Preference number: 4 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSLSALQ*QHQDLG
Trigger: ACCGAGGTCTTGGTGCTGGCACTGCAGAGCCGAGAG...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTGCGGCCCGCAGCCCTaGTCATTGAGCCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILCGPQP*SLSPSV
Trigger: AACTGAAGGGCTCAATGAGCAGGGCTGCGGGCCGCA...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTCGGTGGAGGACGTCTaGAGGTCATCGGCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILSVEDV*RSSASV
Trigger: GACACTGGCCGATGACCTGCAGACGTCCTCCACCGA...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp CATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTGCAAGATGGCCACCTCCTaGCGGTTGCGCAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: HTWPKQGILTTKNKWHLCKMATS*RLRRIL
Trigger: CAGGATCCTGCGCAACCGGCAGGAGGTGGCCATCTT...GCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCCCTGCCAGGGACTGCTaGAAGCGCTCCTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSPARDC*KRSFTA
Trigger: GGCTGTGAAGGAGCGCTTGCAGCAGTCCCTGGCAGG...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCACTCTTGGGCTTGCTaGTCACGGAGAGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIHSWAC*SRRAPG
Trigger: CCCTGGGGCTCTCCGTGAGCAGCAAGCCCAAGAGTG...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCCCCCACTCTTGGGCTTaGTGCTCACGGAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILPHSWA*CSRRAP
Trigger: TGGGGCTCTCCGTGAGCAGCAAGCCCAAGAGTGGGG...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCCCCCACTCTTGGGCTTaGTGCTCACGGAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSPHSWA*CSRRAP
Trigger: TGGGGCTCTCCGTGAGCAGCAAGCCCAAGAGTGGGG...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AACATCCTGTGGACATTAGAGCTCTGTGCTCCTGTCACTGAGTATCACTGTGAGAGCACTGCCTCCCTTTaGCTTAAGGACTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: NILWTLELCAPVTEYHCESTASL*LKDWEC
Trigger: GCACTCCCAGTCCTTAAGGCAAAGGGAGGCAGTGCT...CTCACAGTGATACTCAGTGACAGGAGCACAGAGCTCTAATGTCCACAGGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCGGGGCCCTGTGTGACTaGACAGGTTGCATGCCTGTG +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILGALCD*TGCMPV
Trigger: CACAGGCATGCAACCTGTGCAGTCACACAGGGCCCC...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCAGCTGCTCCAGCACCTaGCCTCGGTCCATGGCGCCG +
Preference number: 4 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEISCSST*PRSMAP
Trigger: CGGCGCCATGGACCGAGGCCAGGTGCTGGAGCAGCT...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp CATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTGCTCGCTGAGGTACTCGTaGTCCAGGAGGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: HTWPKQGILTTKNKWHLCSLRYS*SRRLSS
Trigger: GCTGCTCAGCCTCCTGGACCACGAGTACCTCAGCGA...GCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTGCAGGCTCTGCAGGATaGAGGCCACGGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSAGSAG*RPRPSS
Trigger: AGAAGATGGCCGTGGCCTCCATCCTGCAGAGCCTGC...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCGGGATTCCACGAAGCTaGGCCCCGAGTGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILGIPRS*APSGGL
Trigger: CAGACCTCCACTCGGGGCCCAGCTTCGTGGAATCCC...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCTGGCTAGCTCAGGGCTaGCTCCTTTGCTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIWLAQG*LLCWAP
Trigger: GGGAGCCCAGCAAAGGAGCCAGCCCTGAGCTAGCCA...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp CATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTGCGCTCGCCGTTCACCCTaGTTGCAGGGTAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: HTWPKQGILTTKNKWHLCARRSP*LQGSCC
Trigger: ACAGCAGCTACCCTGCAACCAGGGTGAACGGCGAGC...GCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCGCTCGCCGTTCACCCTaGTTGCAGGGTAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILARRSP*LQGSCC
Trigger: ACAGCAGCTACCCTGCAACCAGGGTGAACGGCGAGC...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCAACCTCGGTAGCCCCCTaGGTGAAACGCAGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: SISSSGGQAGISFGMKSSTSVAP*VKRSSC
Trigger: GCACGAGCTGCGTTTCACCCAGGGGGCTACCGAGGT...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCAGCTTGCCTCCAAGATaGCCACCTCCTGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILSLPPR*PPPAGC
Trigger: GCAACCGGCAGGAGGTGGCCATCTTGGAGGCAAGCT...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCCTCAGGTGGACAAGCTaGTATTTCCTTTGGAATGAA +
Preference number: 4 (lower is better)
Translates to: KNRALLSMGPCVTAQVACLRWTS*YFLWNE
Trigger: TTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAG...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCCAGGGTGGTATCGCTaGGGTACTCGTGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIPGWYR*GTRGPG
Trigger: TCCTGGACCACGAGTACCTCAGCGATACCACCCTGG...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTTCTTCCCTTTGCCGTaGTCACAGGTCTCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSFFPLP*SQVSRR
Trigger: CCGCCGGGAGACCTGTGATCACGGCAAAGGGAAGAA...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCTTCTTCCCTTTGCCGTaGTCACAGGTCTCCCGGCGG +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIFFPLP*SQVSRR
Trigger: CCGCCGGGAGACCTGTGATCACGGCAAAGGGAAGAA...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCAGGTTGCGCAGGATCCTaGAGGCAAATGGGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: SISSSGGQAGISFGMKSSGCAGS*RQMGVG
Trigger: CCCGACACCCATTTGCCTTCAGGATCCTGCGCAACC...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGGCAGCGCCTCCGGAGTaGCTCTGGAGCCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGAAPPE*LWSPSP
Trigger: TGGAGATGGGCTCCAGAGTCACTCCGGAGGCGCTGC...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCCGGGGCTCAGGCCACTaGTTCTGGCAGGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILRGSGH*FWQDLA
Trigger: TGCAAGATCCTGCCAGAATCAGTGGCCTGAGCCCCG...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp AACATCCTGTGGACATTAGAGCTCTGTGCTCCTGTCACTGAGTATCACTGTGAGGCTCAGAAACACAGTTaGCAGGGAGAGGTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: NILWTLELCAPVTEYHCEAQKHS*QGEVAL
Trigger: CAGAGCAACCTCTCCCTGTCAACTGTGTTTCTGAGC...CTCACAGTGATACTCAGTGACAGGAGCACAGAGCTCTAATGTCCACAGGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp CATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTGCAGCTGCTTGGCCCACTaGCCGAAACGCTTTTTCCGC +
Preference number: 4 (lower is better)
Translates to: HTWPKQGILTTKNKWHLCSCLAH*PKRFFR
Trigger: GCGGAAAAAGCGTTTCGGGCAGTGGGCCAAGCAGCT...GCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp CATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTGCCTGATGACCGTCAGCTaGTTGGCCCACTGCCCGAAA +
Preference number: 4 (lower is better)
Translates to: HTWPKQGILTTKNKWHLCLMTVS*LAHCPK
Trigger: TTTCGGGCAGTGGGCCAAGCAGCTGACGGTCATCAG...GCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCGTGAAACGCAGCTCGTaGCTCTTGTGCCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILVKRSS*LLCRLS
Trigger: GGACAGCCGGCACAAGAGGCACGAGCTGCGTTTCAC...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCAGTGAAACGCAGCTCGTaGCTCTTGTGCCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SISSSGGQAGISFGMKSSVKRSS*LLCRLS
Trigger: GGACAGCCGGCACAAGAGGCACGAGCTGCGTTTCAC...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCGCCTGCTCTCGGCTCTaGAGTGCCAGCACCAAGACC +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSACSRL*SASTKT
Trigger: GGTCTTGGTGCTGGCACTGCAGAGCCGAGAGCAGGC...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCAGCCACTCCTCGGCCTaGTCTCGGCTCTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEISHSSA*SRLCSA
Trigger: GGCACTGCAGAGCCGAGAGCAGGCCGAGGAGTGGCT...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCAGCCACCTCACAGCCTTaGAGGGCGATGGCGTTCACA +
Preference number: 4 (lower is better)
Translates to: SISSSGGQAGISFGMKSSATSQP*RAMAFT
Trigger: TGTGAACGCCATCGCCCTGCAAGGCTGTGAGGTGGC...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCCTCCTGCCAGGGACTaGTGCAAGCGCTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIPPARD*CKRSFT
Trigger: TGTGAAGGAGCGCTTGCAGCAGTCCCTGGCAGGAGG...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGCAGCCCGGTGAGCTCTaGGAGCAGCTGCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGQPGEL*EQLLQH
Trigger: GTGCTGGAGCAGCTGCTCCCAGAGCTCACCGGGCTG...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCGCAGGCTCTGCAGGATaGAGGCCACGGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIAGSAG*RPRPSS
Trigger: AGAAGATGGCCGTGGCCTCCATCCTGCAGAGCCTGC...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCGGGCTGCAGCCATTGTaGGAGCTGATGTACTCAGGC +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILGLQPL*ELMYSG
Trigger: GCCTGAGTACATCAGCTCCCACAATGGCTGCAGCCC...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCGGAGGACTGGGGATCTaGGGACCTCCACTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSGGLGI*GPPLPQ
Trigger: CTGAGGGAGTGGAGGTCCCCAGATCCCCAGTCCTCC...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCAGCTTGCCTCCAAGATaGCCACCTCCTGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILISLPPR*PPPAGC
Trigger: GCAACCGGCAGGAGGTGGCCATCTTGGAGGCAAGCT...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCGGTTGCGCAGGATCCTaGAGGCAAATGGGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSGCAGS*RQMGVG
Trigger: CCCGACACCCATTTGCCTTCAGGATCCTGCGCAACC...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCCGGGGCTCAGGCCACTaGTTCTGGCAGGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSRGSGH*FWQDLA
Trigger: TGCAAGATCCTGCCAGAATCAGTGGCCTGAGCCCCG...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCAGAGAGGATGGATTGGTaGCTGGGGTCCAGGGCACTT +
Preference number: 4 (lower is better)
Translates to: SISSSGGQAGISFGMKSSERMDW*LGSRAL
Trigger: AAGTGCCCTGGACCCCAGTCACCAATCCATCCTCTC...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCGCCGTTCACCCTGGTTaGAGGGTAGCTGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSAVHPG*RVAAVC
Trigger: GCAGACAGCAGCTACCCTGCAACCAGGGTGAACGGC...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCAAGCTGCTTGGCCCACTaGCCGAAACGCTTTTTCCGC +
Preference number: 4 (lower is better)
Translates to: SISSSGGQAGISFGMKSSSCLAH*PKRFFR
Trigger: GCGGAAAAAGCGTTTCGGGCAGTGGGCCAAGCAGCT...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTGATGACCGTCAGCTaGTTGGCCCACTGCCCGAAA +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILILMTVS*LAHCPK
Trigger: TTTCGGGCAGTGGGCCAAGCAGCTGACGGTCATCAG...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCGCTGCAGGTATCCAGTaGCAACCTCAGATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILAAGIQ*QPQMWL
Trigger: CAGCCACATCTGAGGTTGGCACTGGATACCTGCAGC...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCGCCTGCTCTCGGCTCTaGAGTGCCAGCACCAAGACC +
Preference number: 4 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEIACSRL*SASTKT
Trigger: GGTCTTGGTGCTGGCACTGCAGAGCCGAGAGCAGGC...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTTGTCCAGGTCCAACTTaGACAGGAGGACTGGGGATC +
Preference number: 4 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSCPGPT*TGGLGI
Trigger: GATCCCCAGTCCTCCTGTGCAAGTTGGACCTGGACA...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCGCCACCTCACAGCCTTaGAGGGCGATGGCGTTCACA +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSATSQP*RAMAFT
Trigger: TGTGAACGCCATCGCCCTGCAAGGCTGTGAGGTGGC...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCAAGATGGCCACCTCCTaGCGGTTGCGCAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSKMATS*RLRRIL
Trigger: CAGGATCCTGCGCAACCGGCAGGAGGTGGCCATCTT...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCAGATGGGACTTCTCACTaGAGGAGGAGGCGTGACGCT +
Preference number: 4 (lower is better)
Translates to: SISSSGGQAGISFGMKSSDGTSH*RRRRDA
Trigger: AGCGTCACGCCTCCTCCTGCAGTGAGAAGTCCCATC...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCGATGGGACTTCTCACTaGAGGAGGAGGCGTGACGCT +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIDGTSH*RRRRDA
Trigger: AGCGTCACGCCTCCTCCTGCAGTGAGAAGTCCCATC...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp CTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATGGGAGCTGGAGACCTCCTTTGCTaGAAGGGGCTGCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LIFTCWLHQHVNIRTMGAGDLLC*KGLQAL
Trigger: CAGAGCCTGCAGCCCCTTCCAGCAAAGGAGGTCTCC...AGCTCCCATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCGGAGACCTCCTTTGCTaGAAGGGGCTGCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSGDLLC*KGLQAL
Trigger: CAGAGCCTGCAGCCCCTTCCAGCAAAGGAGGTCTCC...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGGGGATTCCACGAAGCTaGGCCCCGAGTGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGGIPRS*APSGGL
Trigger: CAGACCTCCACTCGGGGCCCAGCTTCGTGGAATCCC...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTCTCCCCATCATCCTCTaGCATGTCCCGAAGGTCACT +
Preference number: 4 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSLPIIL*HVPKVT
Trigger: AGTGACCTTCGGGACATGCCAGAGGATGATGGGGAG...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCGAACCTCCTCCTCGGTaGAGGACGTCTGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIEPPPR*RTSAGH
Trigger: ATGACCTGCAGACGTCCTCCACCGAGGAGGAGGTTC...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCGATCCTGAAGGCAAATaGGTGTCGGGGCCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILDPEGK*VSGPKA
Trigger: GGCTTTGGGCCCCGACACCCATTTGCCTTCAGGATC...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCCTGGGCTGCTCCGAATaGCTTCCTTCAGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILLGCSE*LPSVPS
Trigger: AGAGGGAACTGAAGGAAGCCATTCGGAGCAGCCCAG...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTCCAAGGTCACCCAGCTaGTCATTAGAGGCATGGCTC +
Preference number: 4 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSPRSPS*SLEAWL
Trigger: GAGCCATGCCTCTAATGACCAGCTGGGTGACCTTGG...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCAGCCATTGTGGGAGCTaGTGTACTCAGGCGACTTGC +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSSHCGS*CTQATC
Trigger: GCAAGTCGCCTGAGTACATCAGCTCCCACAATGGCT...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCCCTTGGGCACGTAGATaGTGCTGCAGGTATCCAGTG +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSPWARR*CCRYPV
Trigger: CACTGGATACCTGCAGCATCATCTACGTGCCCAAGG...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCCACGCTGTCAGAATCTaGGGTCTGCTTCTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILHAVRI*GLLLLG
Trigger: TCCCAAGAGAAGCAGACCTCAGATTCTGACAGCGTG...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCGCGACCCATGTCCTCTaGACAGCTTGCCTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIATHVL*TACLQD
Trigger: ATCTTGGAGGCAAGCTGTTCAGAGGACATGGGTCGC...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCGCGACCCATGTCCTCTaGACAGCTTGCCTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSATHVL*TACLQD
Trigger: ATCTTGGAGGCAAGCTGTTCAGAGGACATGGGTCGC...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCGCCGTTCACCCTGGTTaGAGGGTAGCTGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEIAVHPG*RVAAVC
Trigger: GCAGACAGCAGCTACCCTGCAACCAGGGTGAACGGC...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp CATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTGCGGAAGGCACATATCCTaGATTCCCTCACCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: HTWPKQGILTTKNKWHLCGRHIS*IPSPGA
Trigger: TGCACCTGGTGAGGGAATGCAGGATATGTGCCTTCC...GCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTGTCCAGGTCCAACTTaGACAGGAGGACTGGGGATC +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSCPGPT*TGGLGI
Trigger: GATCCCCAGTCCTCCTGTGCAAGTTGGACCTGGACA...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp CATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTGCTGCTCTTCTTCCCTTTaGCGTGATCACAGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: HTWPKQGILTTKNKWHLCCSSSL*RDHRSP
Trigger: GGGAGACCTGTGATCACGGCAAAGGGAAGAAGAGCA...GCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGTGCGGCCCGCAGCCCTaGTCATTGAGCCCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGCGPQP*SLSPSV
Trigger: AACTGAAGGGCTCAATGAGCAGGGCTGCGGGCCGCA...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGTCGGTGGAGGACGTCTaGAGGTCATCGGCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGSVEDV*RSSASV
Trigger: GACACTGGCCGATGACCTGCAGACGTCCTCCACCGA...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp CATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTGCGGAAATACAGAGTGTTaGACTTCAGGCGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: HTWPKQGILTTKNKWHLCGNTEC*TSGGTS
Trigger: GCTGGTGCCGCCTGAAGTGCAACACTCTGTATTTCC...GCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCGGAAATACAGAGTGTTaGACTTCAGGCGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILGNTEC*TSGGTS
Trigger: GCTGGTGCCGCCTGAAGTGCAACACTCTGTATTTCC...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCCGTTTGACTTTGACCTaGGGGTCCACACGATGGGAC +
Preference number: 4 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILRLTLT*GSTRWD
Trigger: GTCCCATCGTGTGGACCCGCAGGTCAAAGTCAAACG...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCCGTTTGACTTTGACCTaGGGGTCCACACGATGGGAC +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSRLTLT*GSTRWD
Trigger: GTCCCATCGTGTGGACCCGCAGGTCAAAGTCAAACG...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGCCTCCTGCCAGGGACTaGTGCAAGCGCTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGPPARD*CKRSFT
Trigger: TGTGAAGGAGCGCTTGCAGCAGTCCCTGGCAGGAGG...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCCCCATCATCCTCTaGCATGTCCCGAAGGTCACT +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILILPIIL*HVPKVT
Trigger: AGTGACCTTCGGGACATGCCAGAGGATGATGGGGAG...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCCTCAGCTCCCCCAACTaGCTTGCTCACTTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSLSSPN*LAHFSD
Trigger: ATCCGAGAAGTGAGCAAGCCAGTTGGGGGAGCTGAG...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCGAGGTCTGCTTCTCTTaGGACAGCCTCTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILEVCFS*DSLLSR
Trigger: CCTGGACAAGAGGCTGTCCCAAGAGAAGCAGACCTC...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCGAGGTCTGCTTCTCTTaGGACAGCCTCTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIEVCFS*DSLLSR
Trigger: CCTGGACAAGAGGCTGTCCCAAGAGAAGCAGACCTC...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTGCGGGTCCACACGATaGGACTTCTCACTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSCGSTR*DFSLQE
Trigger: CTCCTGCAGTGAGAAGTCCCATCGTGTGGACCCGCA...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTTGGCACTGGAGGCGTaGCGTTTGACTTTGACCTGC +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSLALEA*RLTLTC
Trigger: GCAGGTCAAAGTCAAACGCCACGCCTCCAGTGCCAA...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATTGGCACTGGAGGCGTaGCGTTTGACTTTGACCTGC +
Preference number: 4 (lower is better)
Translates to: SISSSGGQAGISFGMKSSLALEA*RLTLTC
Trigger: GCAGGTCAAAGTCAAACGCCACGCCTCCAGTGCCAA...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp AACATCCTGTGGACATTAGAGCTCTGTGCTCCTGTCACTGAGTATCACTGTGAGCCCTACAACATCCTGTaGACATTAGAGCTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: NILWTLELCAPVTEYHCEPYNIL*TLELCA
Trigger: AGCACAGAGCTCTAATGTCCACAGGATGTTGTAGGG...CTCACAGTGATACTCAGTGACAGGAGCACAGAGCTCTAATGTCCACAGGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCGGGGTCCAGGGCACTTaGAGTTGCCAGCTTAGTTAC +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIGVQGT*SCQLSY
Trigger: GTAACTAAGCTGGCAACTCCAAGTGCCCTGGACCCC...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCGACAGACTGAGAGGATaGATTGGTGACTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILDRLRG*IGDWGP
Trigger: TGGACCCCAGTCACCAATCCATCCTCTCAGTCTGTC...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCCACGCTGTCAGAATCTaGGGTCTGCTTCTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSHAVRI*GLLLLG
Trigger: TCCCAAGAGAAGCAGACCTCAGATTCTGACAGCGTG...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCAGTTGCGCCCAGCACTaGCGATGCTGGTTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSSCAQH*RCWLRS
Trigger: AGACCTTAACCAGCATCGTCAGTGCTGGGCGCAACT...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp CTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATGGGAGCTGGGAGTGCGATGCTGTaGATGGGATGGAAGGGGTTA +
Preference number: 4 (lower is better)
Translates to: LIFTCWLHQHVNIRTMGAGSAML*MGWKGL
Trigger: TAACCCCTTCCATCCCATTCACAGCATCGCACTCCC...AGCTCCCATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCAGGGTAGCTGCTGTCTaGGTCCTCATAGTAGCCATC +
Preference number: 4 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILRVAAV*VLIVAI
Trigger: GATGGCTACTATGAGGACGCAGACAGCAGCTACCCT...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCTGGTTGCAGGGTAGCTaGTGTCTGCGTCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIWLQGS*CLRPHS
Trigger: ACTATGAGGACGCAGACAGCAGCTACCCTGCAACCA...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCGGAAGGCACATATCCTaGATTCCCTCACCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSGRHIS*IPSPGA
Trigger: TGCACCTGGTGAGGGAATGCAGGATATGTGCCTTCC...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCAACCTCAGATGTGGCTaGCGATCCTTGGAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILNLRCG*RSLELL
Trigger: CAAAAGCTCCAAGGATCGGCAGCCACATCTGAGGTT...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCGCTGCAGGTATCCAGTaGCAACCTCAGATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSAAGIQ*QPQMWL
Trigger: CAGCCACATCTGAGGTTGGCACTGGATACCTGCAGC...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp CAGACTTCTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATCTCTCGGCTCTGCAGTaGCAGCACCAAGACCTCGGT +
Preference number: 4 (lower is better)
Translates to: QTSYIHMLAPPACKYKNYLSALQ*QHQDLG
Trigger: ACCGAGGTCTTGGTGCTGGCACTGCAGAGCCGAGAG...ATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAGAAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCATTTTGCTCCTGGGCTaGTCCGAATGGCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILILLLG*SEWLPS
Trigger: TGAAGGAAGCCATTCGGAGCAGCCCAGGAGCAAAAT...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTTGACAGGGAGAGGTTaGTCTGGAACGCTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSLTGRG*SGTLFW
Trigger: CCAGAACAGCGTTCCAGAGCAACCTCTCCCTGTCAA...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCCATGGCTGACACAGTaGCTGACATATGGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIPWLTQ*LTYGEC
Trigger: GCACTCACCATATGTCAGGCACTGTGTCAGCCATGG...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCAAGCTGGGCCCCGAGTaGAGGTCTGCTGTGTTCACA +
Preference number: 4 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEIKLGPE*RSAVFT
Trigger: TGTGAACACAGCAGACCTCCACTCGGGGCCCAGCTT...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTGTGGCTGCCGATCCTTaGAGCTTTTGTAACACAGGA +
Preference number: 4 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSVAADP*SFCNTG
Trigger: TCCTGTGTTACAAAAGCTCCAAGGATCGGCAGCCAC...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCGAACCTCCTCCTCGGTaGAGGACGTCTGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEIEPPPR*RTSAGH
Trigger: ATGACCTGCAGACGTCCTCCACCGAGGAGGAGGTTC...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCAGCCTTGCAGGGCGATaGCGTTCACATGGGTTCGCA +
Preference number: 4 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEISLAGR*RSHGFA
Trigger: TGCGAACCCATGTGAACGCCATCGCCCTGCAAGGCT...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGGATCCTGAAGGCAAATaGGTGTCGGGGCCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGDPEGK*VSGPKA
Trigger: GGCTTTGGGCCCCGACACCCATTTGCCTTCAGGATC...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCCTGGGCTGCTCCGAATaGCTTCCTTCAGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSLGCSE*LPSVPS
Trigger: AGAGGGAACTGAAGGAAGCCATTCGGAGCAGCCCAG...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGGGAGGCTACGATGGATaGGCTCCTCTTCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGGGYDG*APLPQL
Trigger: GAGCTGAGGAAGAGGAGCCCATCCATCGTAGCCTCC...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCGGTTGGAGGCTACGATaGATGGGCTCCTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSGWRLR*MGSSSS
Trigger: TGAGGAAGAGGAGCCCATCCATCGTAGCCTCCAACC...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGGCACCCTTCCTTGGTTaGAGGCTACGATGGATGGGC +
Preference number: 4 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGAPFLG*RLRWMG
Trigger: GCCCATCCATCGTAGCCTCCAACCAAGGAAGGGTGC...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AACATCCTGTGGACATTAGAGCTCTGTGCTCCTGTCACTGAGTATCACTGTGAGTTATTTTTCCTGCTGTaGTCTCCAGCTACCTCAGAG +
Preference number: 4 (lower is better)
Translates to: NILWTLELCAPVTEYHCELFFLL*SPATSE
Trigger: CTCTGAGGTAGCTGGAGACCACAGCAGGAAAAATAA...CTCACAGTGATACTCAGTGACAGGAGCACAGAGCTCTAATGTCCACAGGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCAGCCATTGTGGGAGCTaGTGTACTCAGGCGACTTGC +
Preference number: 4 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEISHCGS*CTQATC
Trigger: GCAAGTCGCCTGAGTACATCAGCTCCCACAATGGCT...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCATCCACAATCGAGTGTaGGGGGCTGCAGCCATTGTG +
Preference number: 4 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEIIHNRV*GAAAIV
Trigger: CACAATGGCTGCAGCCCCTCACACTCGATTGTGGAT...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp AACATCCTGTGGACATTAGAGCTCTGTGCTCCTGTCACTGAGTATCACTGTGAGGAGTATGACAGACACTaGAGACATAGTTGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: NILWTLELCAPVTEYHCEEYDRH*RHSWRV
Trigger: AACTCTCCAACTATGTCTTCAGTGTCTGTCATACTC...CTCACAGTGATACTCAGTGACAGGAGCACAGAGCTCTAATGTCCACAGGATGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCGTGCTAGTGTGCTTCTaGATGTTGCAGTACAAGGGG +
Preference number: 4 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILVLVCF*MLQYKG
Trigger: CCCCTTGTACTGCAACATTCAGAAGCACACTAGCAC...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp CTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATGGGAGCTTGGTTGCAGGGTAGCTaGTGTCTGCGTCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: LIFTCWLHQHVNIRTMGAWLQGS*CLRPHS
Trigger: ACTATGAGGACGCAGACAGCAGCTACCCTGCAACCA...AGCTCCCATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCAAACCTCAGATGTGGCTaGCGATCCTTGGAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: SISSSGGQAGISFGMKSSNLRCG*RSLELL
Trigger: CAAAAGCTCCAAGGATCGGCAGCCACATCTGAGGTT...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGGGACTGGGAGTGCGATaGTGTGAATGGGATGGAAGG +
Preference number: 4 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGGLGVR*CEWDGR
Trigger: CCTTCCATCCCATTCACAGCATCGCACTCCCAGTCC...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp CTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATGGGAGCTACACTGCACCACCAATaGTTCAGCACTGCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LIFTCWLHQHVNIRTMGATLHHQ*FSTASL
Trigger: AAGGGAGGCAGTGCTGAAGCATTGGTGGTGCAGTGT...AGCTCCCATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCTGTGACTGCACAGGTTaGATGCCTGTGAAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEICDCTG*MPVKLA
Trigger: GGCCAGCTTCACAGGCATGCAACCTGTGCAGTCACA...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp AACATCCTGTGGACATTAGAGCTCTGTGCTCCTGTCACTGAGTATCACTGTGAGAACAAGTGGCATCTGTaGCTTAGCCATTTTGCTTAC +
Preference number: 4 (lower is better)
Translates to: NILWTLELCAPVTEYHCENKWHL*LSHFAY
Trigger: GTAAGCAAAATGGCTAAGGCACAGATGCCACTTGTT...CTCACAGTGATACTCAGTGACAGGAGCACAGAGCTCTAATGTCCACAGGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp CAGACTTCTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATAAGCTGGGCCCCGAGTaGAGGTCTGCTGTGTTCACA +
Preference number: 4 (lower is better)
Translates to: QTSYIHMLAPPACKYKNYKLGPE*RSAVFT
Trigger: TGTGAACACAGCAGACCTCCACTCGGGGCCCAGCTT...ATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAGAAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTCTTTGCCTTAAGGACTaGGAGTGCGATGCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSLCLKD*ECDAVN
Trigger: ATTCACAGCATCGCACTCCCAGTCCTTAAGGCAAAG...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp CATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTGCACCCCTATAGCAAAGTaGCCACGGTTATTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: HTWPKQGILTTKNKWHLCTPIAK*PRLFWD
Trigger: ATCCCAGAATAACCGTGGCCACTTTGCTATAGGGGT...GCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCACAGTCTCAAACTCCTaGGCTCAAGCGGTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEITVSNS*AQAVLL
Trigger: CAGGAGGACCGCTTGAGCCCAGGAGTTTGAGACTGT...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTTGCCATACTTGTATTaGTTGGCACTGGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSLPYLY*LALEAW
Trigger: CCACGCCTCCAGTGCCAATCAATACAAGTATGGCAA...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp CATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTGCTTCCTTCTTTCCTCTTaGGCTAAGCACTGGCACTTA +
Preference number: 4 (lower is better)
Translates to: HTWPKQGILTTKNKWHLCFLLSS*AKHWHL
Trigger: TAAGTGCCAGTGCTTAGCTCAAGAGGAAAGAAGGAA...GCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCAGTTGGAGAGTTAGGTaGCATTTCAGGATCCACGTT +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILSWRVR*HFRIHV
Trigger: AACGTGGATCCTGAAATGTCACCTAACTCTCCAACT...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTGTGACAGTAGAATTCTaGCAGACTGAACACTTGGCA +
Preference number: 4 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSVTVEF*QTEHLA
Trigger: TGCCAAGTGTTCAGTCTGTCAGAATTCTACTGTCAC...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp CTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATGGGAGCTGGAAAGCTGACAGACTaGGAGGATGGATTGGTGACT +
Preference number: 4 (lower is better)
Translates to: LIFTCWLHQHVNIRTMGAGKLTD*EDGLVT
Trigger: AGTCACCAATCCATCCTCTCAGTCTGTCAGCTTTCC...AGCTCCCATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCAAGGACTCATAGGAGCTaGTCATTGCGTCAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: SISSSGGQAGISFGMKSSRTHRS*SLRQSH
Trigger: ATGACTCTGACGCAATGAGCAGCTCCTATGAGTCCT...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCTGCTCTTCTTCCCTTTaGCGTGATCACAGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEICSSSL*RDHRSP
Trigger: GGGAGACCTGTGATCACGGCAAAGGGAAGAAGAGCA...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCCTCGGCTCGGTTCTTaGCATACTTGTATTGATTGG +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIPRLGS*HTCIDW
Trigger: CCAATCAATACAAGTATGGCAAGAACCGAGCCGAGG...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCCCTCGGCTCGGTTCTTaGCATACTTGTATTGATTGG +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSPRLGS*HTCIDW
Trigger: CCAATCAATACAAGTATGGCAAGAACCGAGCCGAGG...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCCTTCTCCTGTCTCAGTaGTATCAGCTCTGTCCGAAT +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSLLLSQ*YQLCPN
Trigger: ATTCGGACAGAGCTGATAGCACTGAGACAGGAGAAG...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCATTTTGCTCCTGGGCTaGTCCGAATGGCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSILLLG*SEWLPS
Trigger: TGAAGGAAGCCATTCGGAGCAGCCCAGGAGCAAAAT...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCGTTCTGGGGTTTATTTaGAGTTTCCCCACTCTTGGG +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIVLGFI*SFPTLG
Trigger: CCCAAGAGTGGGGAAACTGCAAATAAACCCCAGAAC...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTCAGGTTATTTTTCCTaGTGTGGTCTCCAGCTACCT +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILSGYFS*CGLQLP
Trigger: AGGTAGCTGGAGACCACAGCAGGAAAAATAACCTGA...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTGGGGTCTTGCTATTTaGTTAGGCTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSWGLAI*LGWSAV
Trigger: CACTGCACTCCAGCCTAAGCAAATAGCAAGACCCCA...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTGTGCTTCTGAATGTTaGAGTACAAGGGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSCASEC*STRGGR
Trigger: TCTCCCTCCCCTTGTACTGCAACATTCAGAAGCACA...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCCGTTCACCAGGTTGCTaGTTGCATCCATGCATTCAT +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSRSPGC*LHPCIH
Trigger: ATGAATGCATGGATGCAAGCAGCAACCTGGTGAACG...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp CTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATGGGAGCTGTGGCTGCCGATCCTTaGAGCTTTTGTAACACAGGA +
Preference number: 4 (lower is better)
Translates to: LIFTCWLHQHVNIRTMGAVAADP*SFCNTG
Trigger: TCCTGTGTTACAAAAGCTCCAAGGATCGGCAGCCAC...AGCTCCCATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTGTAGCACCCTTCCTTaGTTGGAGGCTACGATGGAT +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSCSTLP*LEATMD
Trigger: ATCCATCGTAGCCTCCAACCAAGGAAGGGTGCTACA...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp CATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTGCTCATTTCCCATTCCTTaGCTTTCTGTAGCACCCTTC +
Preference number: 4 (lower is better)
Translates to: HTWPKQGILTTKNKWHLCSFPIP*LSVAPF
Trigger: GAAGGGTGCTACAGAAAGCCAAGGAATGGGAAATGA...GCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTCTGCCACTAATCAGTaGGTGATTACTGGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILSATNQ*VITGQV
Trigger: AACCTGACCAGTAATCACCCACTGATTAGTGGCAGA...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCGAGTACCACCATGCCTaGCTAATGAGAGCCACTATT +
Preference number: 4 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILEYHHA*LMRATI
Trigger: AATAGTGGCTCTCATTAGCCAGGCATGGTGGTACTC...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCGCTATTTGCTTAGGCTaGAGTGCAGTGGCAATTCAC +
Preference number: 4 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSAICLG*SAVAIH
Trigger: GTGAATTGCCACTGCACTCCAGCCTAAGCAAATAGC...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCAGAACTATGGGAGCTTaGACAAGTTACCTGACCTCT +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILRTMGA*TSYLTS
Trigger: AGAGGTCAGGTAACTTGTCCAAGCTCCCATAGTTCT...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR CAA 72 bp GCTTACATTTCTCCTAGCTGCCTAACGTTCACCAGGTaGCTGCTTGCATCCATGCATTCATTCGTCTATTTA +
Preference number: 4 (lower is better)
Translates to: AYISPSCLTFTR*LLASMHSFVYL
Trigger: TAAATAGACGAATGAATGCATGGATGCAAGCAGCAACCTGGTGAACGTTAGGCAGCTAGGAGAAATGTAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCTTGCCATACTTGTATTaGTTGGCACTGGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEILPYLY*LALEAW
Trigger: CCACGCCTCCAGTGCCAATCAATACAAGTATGGCAA...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp AACATCCTGTGGACATTAGAGCTCTGTGCTCCTGTCACTGAGTATCACTGTGAGAATGAGAGCCACTATTaGCTGAGCATTTCTTATTTC +
Preference number: 4 (lower is better)
Translates to: NILWTLELCAPVTEYHCENESHY*LSISYF
Trigger: GAAATAAGAAATGCTCAGTCAATAGTGGCTCTCATT...CTCACAGTGATACTCAGTGACAGGAGCACAGAGCTCTAATGTCCACAGGATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCGAGTTCATCTGTTGGTaGGAAAAGACACTTAACCCC +
Preference number: 4 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILEFICW*EKTLNP
Trigger: GGGGTTAAGTGTCTTTTCTCACCAACAGATGAACTC...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCATAGGAGCTGCTCATTaGGTCAGAGTCATTATAGGA +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILIGAAH*VRVIIG
Trigger: TCCTATAATGACTCTGACGCAATGAGCAGCTCCTAT...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCTACATTTCTCCTAGCTaGCTAACGTTCACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIYISPS*LTFTRL
Trigger: CAACCTGGTGAACGTTAGGCAGCTAGGAGAAATGTA...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGCGGCATGTGCCACCGTaGCCAGCTAACTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGRHVPP*PANFCI
Trigger: AATACAAAAGTTAGCTGGGCACGGTGGCACATGCCG...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCTGGAACGCTGTTCTaGGGTTTATTTGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: SISSSGGQAGISFGMKSSSGTLF*GLFAVS
Trigger: GGAAACTGCAAATAAACCCCAGAACAGCGTTCCAGA...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCATGAGCCACCATACCTaGCCTAAACAAGGCATTTTA +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILMSHHT*PKQGIL
Trigger: TAAAATGCCTTGTTTAGGCCAGGTATGGTGGCTCAT...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGGTTCGCAGGTCCATGTaGTCCTTGTGGAAATACAGA +
Preference number: 4 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGVRRSM*SLWKYR
Trigger: TCTGTATTTCCACAAGGATCACATGGACCTGCGAAC...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCGTTCGCAGGTCCATGTaGTCCTTGTGGAAATACAGA +
Preference number: 4 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEIVRRSM*SLWKYR
Trigger: TCTGTATTTCCACAAGGATCACATGGACCTGCGAAC...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTTCAACCTATTTACCTTaGCCAGGGGTTGTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSSTYLP*PGVVSN
Trigger: ATTACTAACAACCCCTGGTCAAGGTAAATAGGTTGA...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCACCACTAATCAGTGGGTaGTTACTGGTCAGGTTATTT +
Preference number: 4 (lower is better)
Translates to: SISSSGGQAGISFGMKSSPLISG*LLVRLF
Trigger: AAATAACCTGACCAGTAATCACCCACTGATTAGTGG...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCCCATTTCCTGAACTGTaGAAACTAGGGCAATATAAC +
Preference number: 4 (lower is better)
Translates to: FFLRWTSWYFLWNEILILPFPEL*KLGQYN
Trigger: GTTATATTGCCCTAGTTTTCACAGTTCAGGAAATGG...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCAGGACTCATAGGAGCTaGTCATTGCGTCAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEIRTHRS*SLRQSH
Trigger: ATGACTCTGACGCAATGAGCAGCTCCTATGAGTCCT...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCACTCAGGTGGACAAGCTaGTATTTCCTTTGGAATGAA +
Preference number: 4 (lower is better)
Translates to: SISSSGGQAGISFGMKSSLRWTS*YFLWNE
Trigger: TTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAG...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCACATTTCTTCCTCAGGTaGACAAGCTGGTATTTCCTT +
Preference number: 4 (lower is better)
Translates to: SISSSGGQAGISFGMKSSHFFLR*TSWYFL
Trigger: AAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CCA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGGCAGACAATAAAGGCTaGTATTTTGGGTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGADNKG*YFGCPG
Trigger: TCCAGGGCACCCAAAATACCAGCCTTTATTGTCTGC...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCTCAGTGGGTGATTACTaGTCAGGTTATTTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILSVGDY*SGYFSC
Trigger: GCAGGAAAAATAACCTGACCAGTAATCACCCACTGA...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCAACAAGTGTGATCAGATaGTCAGGTCTTGTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: SISSSGGQAGISFGMKSSTSVIR*SGLVSL
Trigger: TAAAGAGACAAGACCTGATCATCTGATCACACTTGT...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp CAGACTTCTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATAGGGACTTGATTTACTaGGAGACCCTACCCTACAAC +
Preference number: 4 (lower is better)
Translates to: QTSYIHMLAPPACKYKNYRDLIY*ETLPYN
Trigger: GTTGTAGGGTAGGGTCTCTCAGTAAATCAAGTCCCT...ATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAGAAGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp CAGACTTCTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATATCAGAGCAATCAAGTaGCTTTCCCAAGGTCACCCA +
Preference number: 4 (lower is better)
Translates to: QTSYIHMLAPPACKYKNYIRAIK*LSQGHP
Trigger: TGGGTGACCTTGGGAAAGTCACTTGATTGCTCTGAT...ATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAGAAGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR TCA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCAGAGCCACTATTGACTaGGCATTTCTTATTTCTCAG +
Preference number: 4 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIRATID*AFLISQ
Trigger: CTGAGAAATAAGAAATGCTCAGTCAATAGTGGCTCT...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCATAGGAGCTGCTCATTaGGTCAGAGTCATTATAGGA +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSIGAAH*VRVIIG
Trigger: TCCTATAATGACTCTGACGCAATGAGCAGCTCCTAT...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR GCA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGCTTGTCTCTTTACACTaGACCACCAATGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGLVSLH*TTNASA
Trigger: TGCTGAAGCATTGGTGGTGCAGTGTAAAGAGACAAG...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCGAAGATTCCAGTAGCTaGACTCTGTCTAAAGCATAT +
Preference number: 4 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILEDSSS*TLSKAY
Trigger: ATATGCTTTAGACAGAGTGCAGCTACTGGAATCTTC...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCACATTTTCTTTCCTaGTTGTCTCTGAGTTCCATG +
Preference number: 4 (lower is better)
Translates to: SISSSGGQAGISFGMKSSSHFLS*LSLSSM
Trigger: CATGGAACTCAGAGACAAGCAGGAAAGAAAATGTGA...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp CAGACTTCTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATCAGGGCACTTGGAGTTaGCAGCTTAGTTACTGGATA +
Preference number: 4 (lower is better)
Translates to: QTSYIHMLAPPACKYKNYQGTWS*QLSYWI
Trigger: TATCCAGTAACTAAGCTGGCAACTCCAAGTGCCCTG...ATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAGAAGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCCATTTCTTCCTCAGGTaGACAAGCTGGTATTTCCTT +
Preference number: 4 (lower is better)
Translates to: KSISSSGGQAGISFGMKSHFFLR*TSWYFL
Trigger: AAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR TCA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCGAGGGTGATAAAGTTTaGGTGAGGCTAAAGTCTGTA +
Preference number: 4 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEIEGDKV*VRLKSV
Trigger: TACAGACTTTAGCCTCACTCAAACTTTATCACCCTC...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp CTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATGGGAGCTAGCTGGTATTTCCTTTaGAATGAAATCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: LIFTCWLHQHVNIRTMGASWYFL*NEILIL
Trigger: GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCT...AGCTCCCATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
3UTR CAA 72 bp CTTTTGTTCACATGTATGCAGGCAGGGATAATGTTATaGATTGTTCAACCTATTTACCTTGACCAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LLFTCMQAGIML*IVQPIYLDQGL
Trigger: CAACCCCTGGTCAAGGTAAATAGGTTGAACAATCAATAACATTATCCCTGCCTGCATACATGTGAACAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCAGCTGGTATTTCCTTTaGAATGAAATCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEISWYFL*NEILIL
Trigger: GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCT...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
3UTR CAA 72 bp TTATTGATTGTTCAACCTATTTACCTTGACCAGGGGTaGTTAGTAATGCCCAATATGAATCAAGTTGGCACA +
Preference number: 4 (lower is better)
Translates to: LLIVQPIYLDQG*LVMPNMNQVGT
Trigger: TGTGCCAACTTGATTCATATTGGGCATTACTAACAACCCCTGGTCAAGGTAAATAGGTTGAACAATCAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR GCA 90 bp CAGACTTCTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATTGCTGCTTGCATCCATaGATTCATTCGTCTATTTAT +
Preference number: 4 (lower is better)
Translates to: QTSYIHMLAPPACKYKNYCCLHP*IHSSIY
Trigger: ATAAATAGACGAATGAATGCATGGATGCAAGCAGCA...ATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAGAAGTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CCA 90 bp CAGACTTCTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATCAATATGAATCAAGTTaGCACAAGTGTGATCAGATG +
Preference number: 4 (lower is better)
Translates to: QTSYIHMLAPPACKYKNYQYESS*HKCDQM
Trigger: CATCTGATCACACTTGTGCCAACTTGATTCATATTG...ATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAGAAGTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS TCA 90 bp ACCTGCGGGTCCACACGATGGGACTTCTCACTGCAGGAGGAGGCGTaGCGCTTCACCTGGGCCCCTGTGGGGCGCTCGGGCTCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: TCGSTRWDFSLQEEA*RFTWAPVGRSGSSS
Trigger: GGACGAGGAGCCCGAGCGCCCCACAGGGGCCCAGGTGAAGCGTCACGCCTCCTCCTGCAGTGAGAAGTCCCATCGTGTGGACCCGCAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS TCA 90 bp AGCTTGCCTCCAAGATGGCCACCTCCTGCCGGTTGCGCAGGATCCTaGAGGCAAATGGGTGTCGGGGCCCAAAGCCCGGGGCCACCTCAC +
Preference number: 5 (lower is better)
Translates to: SLPPRWPPPAGCAGS*RQMGVGAQSPGPPH
Trigger: GTGAGGTGGCCCCGGGCTTTGGGCCCCGACACCCATTTGCCTTCAGGATCCTGCGCAACCGGCAGGAGGTGGCCATCTTGGAGGCAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS CCA 90 bp TGCTCTCGGCTCTGCAGTGCCAGCACCAAGACCTCGGTAGCCCCCTaGGTGAAACGCAGCTCGTGCCTCTTGTGCCGGCTGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: CSRLCSASTKTSVAP*VKRSSCLLCRLSLG
Trigger: GCCCAAGGACAGCCGGCACAAGAGGCACGAGCTGCGTTTCACCCAGGGGGCTACCGAGGTCTTGGTGCTGGCACTGCAGAGCCGAGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000455574.6
ENST00000515000.1
CDS CCA 90 bp CAAGATGGCCACCTCCTGCCGGTTGCGCAGGATCCTGAAGGCAAATaGGTGTCGGGGCCCAAAGCCCGGGGCCACCTCACAGCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: QDGHLLPVAQDPEGK*VSGPKARGHLTALQ
Trigger: CTGCAAGGCTGTGAGGTGGCCCCGGGCTTTGGGCCCCGACACCCATTTGCCTTCAGGATCCTGCGCAACCGGCAGGAGGTGGCCATCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS GCA 90 bp CACAGCCACCAGCTTCAGCTCCAGGTCAATCCGGCGCTCCTCCTTTaGCCGACACTGAGCTTCCAGGGTGGCCACGGCTTCTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: HSHQLQLQVNPALLL*PTLSFQGGHGFFQS
Trigger: GCTCTGGAAGAAGCCGTGGCCACCCTGGAAGCTCAGTGTCGGGCAAAGGAGGAGCGCCGGATTGACCTGGAGCTGAAGCTGGTGGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS CCA 90 bp GTCGGGGCCCAAAGCCCGGGGCCACCTCACAGCCTTGCAGGGCGATaGCGTTCACATGGGTTCGCAGGTCCATGTGATCCTTGTGGAAAT +
Preference number: 5 (lower is better)
Translates to: VGAQSPGPPHSLAGR*RSHGFAGPCDPCGN
Trigger: ATTTCCACAAGGATCACATGGACCTGCGAACCCATGTGAACGCCATCGCCCTGCAAGGCTGTGAGGTGGCCCCGGGCTTTGGGCCCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS GCA 90 bp CGTTTCTCAGGCGTGGGCTCTTGGCTAGCTCAGGGCTGGCTCCTTTaGTGGGCTCCCCATCATCCTCTGGCATGTCCCGAAGGTCACTCA +
Preference number: 5 (lower is better)
Translates to: RFSGVGSWLAQGWLL*WAPHHPLACPEGHS
Trigger: TGAGTGACCTTCGGGACATGCCAGAGGATGATGGGGAGCCCAGCAAAGGAGCCAGCCCTGAGCTAGCCAAGAGCCCACGCCTGAGAAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296721.9
ENST00000455574.6
ENST00000515000.1
ENST00000522492.1
CDS CCA 90 bp GGGACAGGAAGTCCCCAGCCCCACCAAGAGGACCAGAACTTACTGTaGGAGCTGATGTACTCAGGCGACTTGCCGGGTCCCAGAGGAAGG +
Preference number: 5 (lower is better)
Translates to: GTGSPQPHQEDQNLL*ELMYSGDLPGPRGR
Trigger: CCTTCCTCTGGGACCCGGCAAGTCGCCTGAGTACATCAGCTCCCACAGTAAGTTCTGGTCCTCTTGGTGGGGCTGGGGACTTCCTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508444.1
CDS TCA 90 bp GAAGTCCCCAGCCCCACCAAGAGGACCAGAACTTACTGTGGGAGCTaGTGTACTCAGGCGACTTGCCGGGTCCCAGAGGAAGGGCCTCTT +
Preference number: 5 (lower is better)
Translates to: EVPSPTKRTRTYCGS*CTQATCRVPEEGPL
Trigger: AAGAGGCCCTTCCTCTGGGACCCGGCAAGTCGCCTGAGTACATCAGCTCCCACAGTAAGTTCTGGTCCTCTTGGTGGGGCTGGGGACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508444.1
CDS CCA 90 bp ACTTCTCACTGCAGGAGGAGGCGTGACGCTTCACCTGGGCCCCTGTaGGGCGCTCGGGCTCCTCGTCCTGCATCTTTTCATAAGGAACAT +
Preference number: 5 (lower is better)
Translates to: TSHCRRRRDASPGPL*GARAPRPASFHKEH
Trigger: ATGTTCCTTATGAAAAGATGCAGGACGAGGAGCCCGAGCGCCCCACAGGGGCCCAGGTGAAGCGTCACGCCTCCTCCTGCAGTGAGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS CCA 90 bp GGTCAATCCGGCGCTCCTCCTTTGCCCGACACTGAGCTTCCAGGGTaGCCACGGCTTCTTCCAGAGCCTTTAATTTTGCTCCTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: GQSGAPPLPDTELPG*PRLLPEPLILLLGC
Trigger: GCAGCCCAGGAGCAAAATTAAAGGCTCTGGAAGAAGCCGTGGCCACCCTGGAAGCTCAGTGTCGGGCAAAGGAGGAGCGCCGGATTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS-3UTR CAA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCATGACCGTCAGCTGCTaGGCCCACTGCCCGAAACGC +
Preference number: 5 (lower is better)
Translates to: KNRALLSMGPCVTAQVACMTVSC*AHCPKR
Trigger: GCGTTTCGGGCAGTGGGCCAAGCAGCTGACGGTCAT...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS TCA 90 bp AACGCAGCTCGTGCCTCTTGTGCCGGCTGTCCTTGGGCACGTAGATaGTGCTGCAGGTATCCAGTGCCAACCTCAGATGTGGCTGCCGAT +
Preference number: 5 (lower is better)
Translates to: NAARASCAGCPWARR*CCRYPVPTSDVAAD
Trigger: ATCGGCAGCCACATCTGAGGTTGGCACTGGATACCTGCAGCATCATCTACGTGCCCAAGGACAGCCGGCACAAGAGGCACGAGCTGCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000455574.6
ENST00000515000.1
CDS CCA 90 bp TCACCAGCACGTTCAGGTAGCCACAGCAGGGAACCTCCTCCTCGGTaGAGGACGTCTGCAGGTCATCGGCCAGTGTCTTCTTCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: SPARSGSHSREPPPR*RTSAGHRPVSSSWR
Trigger: TCTCCAAGAAGAAGACACTGGCCGATGACCTGCAGACGTCCTCCACCGAGGAGGAGGTTCCCTGCTGTGGCTACCTGAACGTGCTGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS-3UTR CAA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCCCAAGGGTAGAACAGTaGTCACCCACACCCACGCTG +
Preference number: 5 (lower is better)
Translates to: KNRALLSMGPCVTAQVACPRVEQ*SPTPTL
Trigger: CAGCGTGGGTGTGGGTGACAACTGTTCTACCCTTGG...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS TCA 90 bp CAGCCTTGCAGGGCGATGGCGTTCACATGGGTTCGCAGGTCCATGTaGTCCTTGTGGAAATACAGAGTGTTGCACTTCAGGCGGCACCAG +
Preference number: 5 (lower is better)
Translates to: QPCRAMAFTWVRRSM*SLWKYRVLHFRRHQ
Trigger: CTGGTGCCGCCTGAAGTGCAACACTCTGTATTTCCACAAGGATCACATGGACCTGCGAACCCATGTGAACGCCATCGCCCTGCAAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS TCA 90 bp AGCTTCAGCTCCAGGTCAATCCGGCGCTCCTCCTTTGCCCGACACTaGGCTTCCAGGGTGGCCACGGCTTCTTCCAGAGCCTTTAATTTT +
Preference number: 5 (lower is better)
Translates to: SFSSRSIRRSSFARH*ASRVATASSRAFNF
Trigger: AAAATTAAAGGCTCTGGAAGAAGCCGTGGCCACCCTGGAAGCTCAGTGTCGGGCAAAGGAGGAGCGCCGGATTGACCTGGAGCTGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS TCA 90 bp CCCACGCTGTCAGAATCTGAGGTCTGCTTCTCTTGGGACAGCCTCTaGGGAGGGACACAGGCAGTCCCTCATCAGAGGGCACATTCAGAA +
Preference number: 5 (lower is better)
Translates to: PTLSESEVCFSWDSL*GGTQAVPHQRAHSE
Trigger: TTCTGAATGTGCCCTCTGATGAGGGACTGCCTGTGTCCCTCCTCAGAGGCTGTCCCAAGAGAAGCAGACCTCAGATTCTGACAGCGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513665.1
CDS TCA 90 bp ATAGCCAAAAGGTGCAATCAGCCCAAGGTCCATCAGTGTGGGAGCTaGTGTACTCAGGCGACTTGCCGGGTCCCAGAGGAAGGGCCTCTT +
Preference number: 5 (lower is better)
Translates to: IAKRCNQPKVHQCGS*CTQATCRVPEEGPL
Trigger: AAGAGGCCCTTCCTCTGGGACCCGGCAAGTCGCCTGAGTACATCAGCTCCCACACTGATGGACCTTGGGCTGATTGCACCTTTTGGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522492.1
CDS CCA 90 bp AAGCACCATAGCCAAAAGGTGCAATCAGCCCAAGGTCCATCAGTGTaGGAGCTGATGTACTCAGGCGACTTGCCGGGTCCCAGAGGAAGG +
Preference number: 5 (lower is better)
Translates to: KHHSQKVQSAQGPSV*ELMYSGDLPGPRGR
Trigger: CCTTCCTCTGGGACCCGGCAAGTCGCCTGAGTACATCAGCTCCCACACTGATGGACCTTGGGCTGATTGCACCTTTTGGCTATGGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522492.1
CDS GCA 90 bp TTCTTCAAAGAGGGATTCCACGAAGCTGGGCCCCGAGTGGAGGTCTaGTGTGTTCACATACAGGTAGGAGACCTCCTTTGCTGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: FFKEGFHEAGPRVEV*CVHIQVGDLLCWKG
Trigger: CCCCTTCCAGCAAAGGAGGTCTCCTACCTGTATGTGAACACAGCAGACCTCCACTCGGGGCCCAGCTTCGTGGAATCCCTCTTTGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296721.9
ENST00000455574.6
ENST00000515000.1
ENST00000522492.1
CDS GCA 90 bp GTGCCGGCTGTCCTTGGGCACGTAGATGATGCTGCAGGTATCCAGTaGCAACCTCAGATGTGGCTGCCGATCCTTGGAGCTTTTGTAACA +
Preference number: 5 (lower is better)
Translates to: VPAVLGHVDDAAGIQ*QPQMWLPILGAFVT
Trigger: TGTTACAAAAGCTCCAAGGATCGGCAGCCACATCTGAGGTTGGCACTGGATACCTGCAGCATCATCTACGTGCCCAAGGACAGCCGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000455574.6
ENST00000515000.1
CDS CCA 90 bp GGGCACGTAGATGATGCTGCAGGTATCCAGTGCCAACCTCAGATGTaGCTGCCGATCCTTGGAGCTTTTGTAACACAGGAGCTGGTCCTC +
Preference number: 5 (lower is better)
Translates to: GHVDDAAGIQCQPQM*LPILGAFVTQELVL
Trigger: GAGGACCAGCTCCTGTGTTACAAAAGCTCCAAGGATCGGCAGCCACATCTGAGGTTGGCACTGGATACCTGCAGCATCATCTACGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000455574.6
ENST00000515000.1
CDS-3UTR CAA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCTGGAAATACAGAGTGTaGCACTTCAGGCGGCACCAG +
Preference number: 5 (lower is better)
Translates to: KNRALLSMGPCVTAQVACWKYRV*HFRRHQ
Trigger: CTGGTGCCGCCTGAAGTGCAACACTCTGTATTTCCA...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCCGCAGCTCGTGCCTCTaGTGCCGGCTGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSRSSCL*CRLSLG
Trigger: GCCCAAGGACAGCCGGCACAAGAGGCACGAGCTGCG...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTGGCCACCTCACAGCCTaGCAGGGCGATGGCGTTCAC +
Preference number: 5 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSGHLTA*QGDGVH
Trigger: GTGAACGCCATCGCCCTGCAAGGCTGTGAGGTGGCC...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTCCCCACTCTTGGGCTaGCTGCTCACGGAGAGCCCC +
Preference number: 5 (lower is better)
Translates to: FFLRWTSWYFLWNEILILSPLLG*LLTESP
Trigger: GGGGCTCTCCGTGAGCAGCAAGCCCAAGAGTGGGGA...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS GCA 90 bp GTCAGAGTCATTATAGGAGCTCTTAAGCTCGCCGTTCACCCTGGTTaGAGGGTAGCTGCTGTCTGCGTCCTCATAGTAGCCATCCACAAT +
Preference number: 5 (lower is better)
Translates to: VRVIIGALKLAVHPG*RVAAVCVLIVAIHN
Trigger: ATTGTGGATGGCTACTATGAGGACGCAGACAGCAGCTACCCTGCAACCAGGGTGAACGGCGAGCTTAAGAGCTCCTATAATGACTCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296721.9
ENST00000455574.6
ENST00000515000.1
ENST00000522492.1
CDS CCA 90 bp CACTCAGGTCACAGTCAAATTCTTCAAAGAGGGATTCCACGAAGCTaGGCCCCGAGTGGAGGTCTGCTGTGTTCACATACAGGTAGGAGA +
Preference number: 5 (lower is better)
Translates to: HSGHSQILQRGIPRS*APSGGLLCSHTGRR
Trigger: TCTCCTACCTGTATGTGAACACAGCAGACCTCCACTCGGGGCCCAGCTTCGTGGAATCCCTCTTTGAAGAATTTGACTGTGACCTGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296721.9
ENST00000455574.6
ENST00000515000.1
ENST00000522492.1
CDS CCA 90 bp CCTCTTCCTCAGCTCAGAAACACAGTTGACAGGGAGAGGTTGCTCTaGAACGCTGTTCTGGGGTTTATTTGCAGTTTCCCCACTCTTGGG +
Preference number: 5 (lower is better)
Translates to: PLPQLRNTVDRERLL*NAVLGFICSFPTLG
Trigger: CCCAAGAGTGGGGAAACTGCAAATAAACCCCAGAACAGCGTTCCAGAGCAACCTCTCCCTGTCAACTGTGTTTCTGAGCTGAGGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000513665.1
CDS-3UTR CAA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCGGTAGGAGACCTCCTTaGCTGGAAGGGGCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: FFLRWTSWYFLWNEILILGRRPP*LEGAAG
Trigger: GCCTGCAGCCCCTTCCAGCAAAGGAGGTCTCCTACC...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCACTCAGGCGTGGGCTCTaGGCTAGCTCAGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SISSSGGQAGISFGMKSSLRRGL*ASSGLA
Trigger: AGCCAGCCCTGAGCTAGCCAAGAGCCCACGCCTGAG...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCCGCCGTTCACCCTGGTaGCAGGGTAGCTGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: FFLRWTSWYFLWNEILILRRSPW*QGSCCL
Trigger: CAGACAGCAGCTACCCTGCAACCAGGGTGAACGGCG...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCCGCAGCTCGTGCCTCTaGTGCCGGCTGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: KSISSSGGQAGISFGMKSRSSCL*CRLSLG
Trigger: GCCCAAGGACAGCCGGCACAAGAGGCACGAGCTGCG...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCGGCCACCTCACAGCCTaGCAGGGCGATGGCGTTCAC +
Preference number: 5 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSGHLTA*QGDGVH
Trigger: GTGAACGCCATCGCCCTGCAAGGCTGTGAGGTGGCC...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCAGCCACCTCCTGCCGGTaGCGCAGGATCCTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: SISSSGGQAGISFGMKSSATSCR*RRILKA
Trigger: TGCCTTCAGGATCCTGCGCAACCGGCAGGAGGTGGC...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCTCCCCACTCTTGGGCTaGCTGCTCACGGAGAGCCCC +
Preference number: 5 (lower is better)
Translates to: HFFLRWTSWYFLWNEILISPLLG*LLTESP
Trigger: GGGGCTCTCCGTGAGCAGCAAGCCCAAGAGTGGGGA...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCATGACCGTCAGCTGCTaGGCCCACTGCCCGAAACGC +
Preference number: 5 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIMTVSC*AHCPKR
Trigger: GCGTTTCGGGCAGTGGGCCAAGCAGCTGACGGTCAT...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp CATACCTGGCCTAAACAAGGCATTTTAACAACCAAGAACAAGTGGCATCTGTGCGCTCCCCCAACTGGCTaGCTCACTTCTCGGATGACC +
Preference number: 5 (lower is better)
Translates to: HTWPKQGILTTKNKWHLCAPPTG*LTSRMT
Trigger: GGTCATCCGAGAAGTGAGCAAGCCAGTTGGGGGAGC...GCACAGATGCCACTTGTTCTTGGTTGTTAAAATGCCTTGTTTAGGCCAGGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCCCGCAGCCCTGCTCATaGAGCCCTTCAGTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: FFLRWTSWYFLWNEILILPQPCS*SPSVLP
Trigger: TGGCAGAACTGAAGGGCTCAATGAGCAGGGCTGCGG...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATGATACGGGTGATCTaGCGGCCCGCAGCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILMIRVI*RPAALL
Trigger: GAGCAGGGCTGCGGGCCGCAAGATCACCCGTATCAT...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCGCGTGGCGTTTGACTTaGACCTGCGGGTCCACACGA +
Preference number: 5 (lower is better)
Translates to: FFLRWTSWYFLWNEILILAWRLT*TCGSTR
Trigger: TCGTGTGGACCCGCAGGTCAAAGTCAAACGCCACGC...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCCTGGAGGCGTGGCGTTaGACTTTGACCTGCGGGTCC +
Preference number: 5 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSLEAWR*TLTCGS
Trigger: GGACCCGCAGGTCAAAGTCAAACGCCACGCCTCCAG...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AAGAACAGGGCCCTTCTAAGCATGGGGCCCTGTGTGACTGCACAGGTTGCATGCTGTGCCTTAGCCATTTaGCTTACATTTCTCCTAGCT +
Preference number: 5 (lower is better)
Translates to: KNRALLSMGPCVTAQVACCALAI*LTFLLA
Trigger: AGCTAGGAGAAATGTAAGCAAAATGGCTAAGGCACA...GCATGCAACCTGTGCAGTCACACAGGGCCCCATGCTTAGAAGGGCCCTGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGCTCAGGCGTGGGCTCTaGGCTAGCTCAGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGLRRGL*ASSGLA
Trigger: AGCCAGCCCTGAGCTAGCCAAGAGCCCACGCCTGAG...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp CAGACTTCTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATTCCTCAGGGGGAGGCTaGTTGGGGAGCGGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: QTSYIHMLAPPACKYKNYSSGGG*LGSGGG
Trigger: GCCTCCACCGCTCCCCAACAAGCCTCCCCCTGAGGA...ATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAGAAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCCCAAGGGTAGAACAGTaGTCACCCACACCCACGCTG +
Preference number: 5 (lower is better)
Translates to: FFLRWTSWYFLWNEILILPRVEQ*SPTPTL
Trigger: CAGCGTGGGTGTGGGTGACAACTGTTCTACCCTTGG...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCCCGCAGCCCTGCTCATaGAGCCCTTCAGTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILPQPCS*SPSVLP
Trigger: TGGCAGAACTGAAGGGCTCAATGAGCAGGGCTGCGG...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCGCCACCTCCTGCCGGTaGCGCAGGATCCTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEIATSCR*RRILKA
Trigger: TGCCTTCAGGATCCTGCGCAACCGGCAGGAGGTGGC...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCAGCGTGGCGTTTGACTTaGACCTGCGGGTCCACACGA +
Preference number: 5 (lower is better)
Translates to: SISSSGGQAGISFGMKSSAWRLT*TCGSTR
Trigger: TCGTGTGGACCCGCAGGTCAAAGTCAAACGCCACGC...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCCGGCGCTCCTCCTTaGCCCGACACTGAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: KSISSSGGQAGISFGMKSSGAPP*PDTELP
Trigger: TGGAAGCTCAGTGTCGGGCAAAGGAGGAGCGCCGGA...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCGCAGTTTCCCCACTCTaGGGCTTGCTGCTCACGGAG +
Preference number: 5 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIAVSPL*GLLLTE
Trigger: CTCCGTGAGCAGCAAGCCCAAGAGTGGGGAAACTGC...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCTCCCATTCCCCACTCTaGGGCTTGCTGCTCACGGAG +
Preference number: 5 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILSHSPL*GLLLTE
Trigger: CTCCGTGAGCAGCAAGCCCAAGAGTGGGGAATGGGA...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515000.1
CDS-3UTR CAA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCGGTAGGAGACCTCCTTaGCTGGAAGGGGCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEIGRRPP*LEGAAG
Trigger: GCCTGCAGCCCCTTCCAGCAAAGGAGGTCTCCTACC...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCATGTACTCAGGCGACTaGCCGGGTCCCAGAGGAAGG +
Preference number: 5 (lower is better)
Translates to: KSISSSGGQAGISFGMKSMYSGD*PGPRGR
Trigger: CCTTCCTCTGGGACCCGGCAAGTCGCCTGAGTACAT...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCGCCGTTCACCCTGGTaGCAGGGTAGCTGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEIRRSPW*QGSCCL
Trigger: CAGACAGCAGCTACCCTGCAACCAGGGTGAACGGCG...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTTGTCCAGGTCCAACTaGCACAGGAGGACTGGGGAT +
Preference number: 5 (lower is better)
Translates to: FFLRWTSWYFLWNEILILLSRSN*HRRTGD
Trigger: ATCCCCAGTCCTCCTGTGCAAGTTGGACCTGGACAA...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTTCTTGGGACAGCCTCTaGTCCAGGTCCAACTTGCAC +
Preference number: 5 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSSWDSL*SRSNLH
Trigger: GTGCAAGTTGGACCTGGACAAGAGGCTGTCCCAAGA...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCATGATACGGGTGATCTaGCGGCCCGCAGCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEIMIRVI*RPAALL
Trigger: GAGCAGGGCTGCGGGCCGCAAGATCACCCGTATCAT...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTGGAGGCGTGGCGTTaGACTTTGACCTGCGGGTCC +
Preference number: 5 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEILEAWR*TLTCGS
Trigger: GGACCCGCAGGTCAAAGTCAAACGCCACGCCTCCAG...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCAGCACCCTTCCTTGGTaGGAGGCTACGATGGATGGG +
Preference number: 5 (lower is better)
Translates to: HFFLRWTSWYFLWNEILISTLPW*EATMDG
Trigger: CCCATCCATCGTAGCCTCCAACCAAGGAAGGGTGCT...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGATGTACTCAGGCGACTaGCCGGGTCCCAGAGGAAGG +
Preference number: 5 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGMYSGD*PGPRGR
Trigger: CCTTCCTCTGGGACCCGGCAAGTCGCCTGAGTACAT...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp AAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCGAGGGGCTGCAGCCATaGTGGGAGCTGATGTACTCA +
Preference number: 5 (lower is better)
Translates to: KSISSSGGQAGISFGMKSEGLQP*WELMYS
Trigger: TGAGTACATCAGCTCCCACAATGGCTGCAGCCCCTC...GGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCGCTCCCCCAACTGGCTaGCTCACTTCTCGGATGACC +
Preference number: 5 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEIAPPTG*LTSRMT
Trigger: GGTCATCCGAGAAGTGAGCAAGCCAGTTGGGGGAGC...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCTTGTCCAGGTCCAACTaGCACAGGAGGACTGGGGAT +
Preference number: 5 (lower is better)
Translates to: HFFLRWTSWYFLWNEILILSRSN*HRRTGD
Trigger: ATCCCCAGTCCTCCTGTGCAAGTTGGACCTGGACAA...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCTTGGGACAGCCTCTaGTCCAGGTCCAACTTGCAC +
Preference number: 5 (lower is better)
Translates to: SISSSGGQAGISFGMKSSSWDSL*SRSNLH
Trigger: GTGCAAGTTGGACCTGGACAAGAGGCTGTCCCAAGA...TGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCGCATATAGGAAGGAGTaGCGCCCAGCACTGACGATG +
Preference number: 5 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILAYRKE*RPALTM
Trigger: CATCGTCAGTGCTGGGCGCAACTCCTTCCTATATGC...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCGCATATAGGAAGGAGTaGCGCCCAGCACTGACGATG +
Preference number: 5 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIAYRKE*RPALTM
Trigger: CATCGTCAGTGCTGGGCGCAACTCCTTCCTATATGC...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTCCAGAGCCTTTAATTTaGCTCCTGGGCTGCTCCGAA +
Preference number: 5 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSPEPLI*LLGCSE
Trigger: TTCGGAGCAGCCCAGGAGCAAAATTAAAGGCTCTGG...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCGTTGACAGGGAGAGGTaGCTCTGGAACGCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSVDRER*LWNAVL
Trigger: CAGAACAGCGTTCCAGAGCAACCTCTCCCTGTCAAC...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp CTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATGGGAGCTGAGACTGCCCAGGACTaGAGGTCCTTGGTCCCTCTA +
Preference number: 5 (lower is better)
Translates to: LIFTCWLHQHVNIRTMGAETAQD*RSLVPL
Trigger: TAGAGGGACCAAGGACCTCAAGTCCTGGGCAGTCTC...AGCTCCCATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp AAAAAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCGAGGGGCTGCAGCCATaGTGGGAGCTGATGTACTCA +
Preference number: 5 (lower is better)
Translates to: KKHFFLRWTSWYFLWNEIEGLQP*WELMYS
Trigger: TGAGTACATCAGCTCCCACAATGGCTGCAGCCCCTC...GATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTGGAAATACAGAGTGTaGCACTTCAGGCGGCACCAG +
Preference number: 5 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSWKYRV*HFRRHQ
Trigger: CTGGTGCCGCCTGAAGTGCAACACTCTGTATTTCCA...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCCCAGAGCCTTTAATTTaGCTCCTGGGCTGCTCCGAA +
Preference number: 5 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSPEPLI*LLGCSE
Trigger: TTCGGAGCAGCCCAGGAGCAAAATTAAAGGCTCTGG...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AACATCCTGTGGACATTAGAGCTCTGTGCTCCTGTCACTGAGTATCACTGTGAGTACCTTGACCAGGGGTaGTTAGTAATGCCCAATATG +
Preference number: 5 (lower is better)
Translates to: NILWTLELCAPVTEYHCEYLDQG*LVMPNM
Trigger: CATATTGGGCATTACTAACAACCCCTGGTCAAGGTA...CTCACAGTGATACTCAGTGACAGGAGCACAGAGCTCTAATGTCCACAGGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCGAACACTTGGCAGTGTaGGGCTTAGACCTGTGGCTT +
Preference number: 5 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILEHLAV*GLDLWL
Trigger: AAGCCACAGGTCTAAGCCCAACACTGCCAAGTGTTC...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp TCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTGATTCTGGCAGGATCTaGCATATAGGAAGGAGTTGC +
Preference number: 5 (lower is better)
Translates to: SSSGGQAGISFGMKSSSSDSGRI*HIGRSC
Trigger: GCAACTCCTTCCTATATGCAAGATCCTGCCAGAATC...AGAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCGATTCTGGCAGGATCTaGCATATAGGAAGGAGTTGC +
Preference number: 5 (lower is better)
Translates to: FFLRWTSWYFLWNEILILDSGRI*HIGRSC
Trigger: GCAACTCCTTCCTATATGCAAGATCCTGCCAGAATC...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCCTTGCCATACTTGTATaGATTGGCACTGGAGGCGTG +
Preference number: 5 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILLAILV*IGTGGV
Trigger: CACGCCTCCAGTGCCAATCAATACAAGTATGGCAAG...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTTGCCATACTTGTATaGATTGGCACTGGAGGCGTG +
Preference number: 5 (lower is better)
Translates to: HFFLRWTSWYFLWNEILILAILV*IGTGGV
Trigger: CACGCCTCCAGTGCCAATCAATACAAGTATGGCAAG...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp AAGCATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCCTAACGTTCACCAGGTaGCTGCTTGCATCCATGCAT +
Preference number: 5 (lower is better)
Translates to: KHFFLRWTSWYFLWNEILLTFTR*LLASMH
Trigger: ATGCATGGATGCAAGCAGCAACCTGGTGAACGTTAG...GAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp CATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCATAGGAGCTGCTCATaGCGTCAGAGTCATTATAGG +
Preference number: 5 (lower is better)
Translates to: HFFLRWTSWYFLWNEILIHRSCS*RQSHYR
Trigger: CCTATAATGACTCTGACGCAATGAGCAGCTCCTATG...GATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000515000.1
CDS-3UTR CAA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCTCAGATGATCAGGTCTaGTCTCTTTACACTGCACCA +
Preference number: 5 (lower is better)
Translates to: FFLRWTSWYFLWNEILILSDDQV*SLYTAP
Trigger: TGGTGCAGTGTAAAGAGACAAGACCTGATCATCTGA...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp CTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATGGGAGCTTCACCAGGTTGCTGCTaGCATCCATGCATTCATTCG +
Preference number: 5 (lower is better)
Translates to: LIFTCWLHQHVNIRTMGASPGCC*HPCIHS
Trigger: CGAATGAATGCATGGATGCAAGCAGCAACCTGGTGA...AGCTCCCATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp TTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTCAATGGGAAGTGTTCCTaGAGCACTCTGAATCTTGTC +
Preference number: 5 (lower is better)
Translates to: FFLRWTSWYFLWNEILILNGKCS*STLNLV
Trigger: GACAAGATTCAGAGTGCTCAAGGAACACTTCCCATT...GAGGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp CTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATGGGAGCTCATAGGAGCTGCTCATaGCGTCAGAGTCATTATAGG +
Preference number: 5 (lower is better)
Translates to: LIFTCWLHQHVNIRTMGAHRSCS*RQSHYR
Trigger: CCTATAATGACTCTGACGCAATGAGCAGCTCCTATG...AGCTCCCATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp TCATTCGTCTATTTATTAAGTGCTAGTGTGCTTCTGAATGTTGCAGTACAAGGGAGCTCAGAAACACAGTaGACAGGGAGAGGTTGCTCT +
Preference number: 5 (lower is better)
Translates to: SFVYLLSASVLLNVAVQGSSETQ*TGRGCS
Trigger: AGAGCAACCTCTCCCTGTCAACTGTGTTTCTGAGCT...CCCTTGTACTGCAACATTCAGAAGCACACTAGCACTTAATAAATAGACGAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp ATTTCTTCCTCAGGTGGACAAGCTGGTATTTCCTTTGGAATGAAATCCTCATCCTTCATTTCCCATTCCTaGGCTTTCTGTAGCACCCTT +
Preference number: 5 (lower is better)
Translates to: ISSSGGQAGISFGMKSSSFISHS*AFCSTL
Trigger: AAGGGTGCTACAGAAAGCCAAGGAATGGGAAATGAA...GGATGAGGATTTCATTCCAAAGGAAATACCAGCTTGTCCACCTGAGGAAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp CAGACTTCTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATATAAAGGCTGGTATTTaGGGTGCCCTGGAGAACGAG +
Preference number: 5 (lower is better)
Translates to: QTSYIHMLAPPACKYKNYIKAGI*GALENE
Trigger: CTCGTTCTCCAGGGCACCCAAAATACCAGCCTTTAT...ATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAGAAGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS-3UTR CAA 90 bp CAGACTTCTTATATTCACATGCTGGCTCCACCAGCATGTAAATATAAGAACTATTGTTCTGGGGTTTATTaGCAGTTTCCCCACTCTTGG +
Preference number: 5 (lower is better)
Translates to: QTSYIHMLAPPACKYKNYCSGVY*QFPHSW
Trigger: CCAAGAGTGGGGAAACTGCAAATAAACCCCAGAACA...ATAGTTCTTATATTTACATGCTGGTGGAGCCAGCATGTGAATATAAGAAGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296721.9
CDS TCA 72 bp TCCACACGATGGGACTTCTCACTGCAGGAGGAGGCGTaGCGCTTCACCTGGGCCCCTGTGGGGCGCTCGGGC +
Preference number: 6 (lower is better)
Translates to: STRWDFSLQEEA*RFTWAPVGRSG
Trigger: GCCCGAGCGCCCCACAGGGGCCCAGGTGAAGCGTCACGCCTCCTCCTGCAGTGAGAAGTCCCATCGTGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS CCA 72 bp GAGGCAGGTCGGCCGCGTTTCTCAGGCGTGGGCTCTTaGCTAGCTCAGGGCTGGCTCCTTTGCTGGGCTCCC +
Preference number: 6 (lower is better)
Translates to: EAGRPRFSGVGS*LAQGWLLCWAP
Trigger: GGGAGCCCAGCAAAGGAGCCAGCCCTGAGCTAGCCAAGAGCCCACGCCTGAGAAACGCGGCCGACCTGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296721.9
ENST00000455574.6
ENST00000515000.1
ENST00000522492.1
CDS CAA 72 bp GGAGGCAGGTCGGCCGCGTTTCTCAGGCGTGGGCTCTaGGCTAGCTCAGGGCTGGCTCCTTTGCTGGGCTCC +
Preference number: 6 (lower is better)
Translates to: GGRSAAFLRRGL*ASSGLAPLLGS
Trigger: GGAGCCCAGCAAAGGAGCCAGCCCTGAGCTAGCCAAGAGCCCACGCCTGAGAAACGCGGCCGACCTGCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296721.9
ENST00000455574.6
ENST00000515000.1
ENST00000522492.1
CDS CAA 72 bp GTGTCGGGGCCCAAAGCCCGGGGCCACCTCACAGCCTaGCAGGGCGATGGCGTTCACATGGGTTCGCAGGTC +
Preference number: 6 (lower is better)
Translates to: VSGPKARGHLTA*QGDGVHMGSQV
Trigger: GACCTGCGAACCCATGTGAACGCCATCGCCCTGCAAGGCTGTGAGGTGGCCCCGGGCTTTGGGCCCCGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS TCA 72 bp CCAAGATGGCCACCTCCTGCCGGTTGCGCAGGATCCTaGAGGCAAATGGGTGTCGGGGCCCAAAGCCCGGGG +
Preference number: 6 (lower is better)
Translates to: PRWPPPAGCAGS*RQMGVGAQSPG
Trigger: CCCCGGGCTTTGGGCCCCGACACCCATTTGCCTTCAGGATCCTGCGCAACCGGCAGGAGGTGGCCATCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS CCA 72 bp CACCTCCTGCCGGTTGCGCAGGATCCTGAAGGCAAATaGGTGTCGGGGCCCAAAGCCCGGGGCCACCTCACA +
Preference number: 6 (lower is better)
Translates to: HLLPVAQDPEGK*VSGPKARGHLT
Trigger: TGTGAGGTGGCCCCGGGCTTTGGGCCCCGACACCCATTTGCCTTCAGGATCCTGCGCAACCGGCAGGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS CCA 72 bp CTCTGCAGTGCCAGCACCAAGACCTCGGTAGCCCCCTaGGTGAAACGCAGCTCGTGCCTCTTGTGCCGGCTG +
Preference number: 6 (lower is better)
Translates to: LCSASTKTSVAP*VKRSSCLLCRL
Trigger: CAGCCGGCACAAGAGGCACGAGCTGCGTTTCACCCAGGGGGCTACCGAGGTCTTGGTGCTGGCACTGCAGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000455574.6
ENST00000515000.1
CDS CCA 72 bp TGCAGGAGGAGGCGTGACGCTTCACCTGGGCCCCTGTaGGGCGCTCGGGCTCCTCGTCCTGCATCTTTTCAT +
Preference number: 6 (lower is better)
Translates to: CRRRRDASPGPL*GARAPRPASFH
Trigger: ATGAAAAGATGCAGGACGAGGAGCCCGAGCGCCCCACAGGGGCCCAGGTGAAGCGTCACGCCTCCTCCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS CAA 90 bp GGCAAATGGGTGTCGGGGCCCAAAGCCCGGGGCCACCTCACAGCCTaGCAGGGCGATGGCGTTCACATGGGTTCGCAGGTCCATGTGATC +
Preference number: 6 (lower is better)
Translates to: GKWVSGPKARGHLTA*QGDGVHMGSQVHVI
Trigger: GATCACATGGACCTGCGAACCCATGTGAACGCCATCGCCCTGCAAGGCTGTGAGGTGGCCCCGGGCTTTGGGCCCCGACACCCATTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS TCA 72 bp TCCAGGTCAATCCGGCGCTCCTCCTTTGCCCGACACTaGGCTTCCAGGGTGGCCACGGCTTCTTCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: SRSIRRSSFARH*ASRVATASSRA
Trigger: GGCTCTGGAAGAAGCCGTGGCCACCCTGGAAGCTCAGTGTCGGGCAAAGGAGGAGCGCCGGATTGACCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS CAA 72 bp CCAGCTTCAGCTCCAGGTCAATCCGGCGCTCCTCCTTaGCCCGACACTGAGCTTCCAGGGTGGCCACGGCTT +
Preference number: 6 (lower is better)
Translates to: PASAPGQSGAPP*PDTELPGWPRL
Trigger: AAGCCGTGGCCACCCTGGAAGCTCAGTGTCGGGCAAAGGAGGAGCGCCGGATTGACCTGGAGCTGAAGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS CAA 90 bp TCACAGCCACCAGCTTCAGCTCCAGGTCAATCCGGCGCTCCTCCTTaGCCCGACACTGAGCTTCCAGGGTGGCCACGGCTTCTTCCAGAG +
Preference number: 6 (lower is better)
Translates to: SQPPASAPGQSGAPP*PDTELPGWPRLLPE
Trigger: CTCTGGAAGAAGCCGTGGCCACCCTGGAAGCTCAGTGTCGGGCAAAGGAGGAGCGCCGGATTGACCTGGAGCTGAAGCTGGTGGCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS CCA 72 bp CAAAGCCCGGGGCCACCTCACAGCCTTGCAGGGCGATaGCGTTCACATGGGTTCGCAGGTCCATGTGATCCT +
Preference number: 6 (lower is better)
Translates to: QSPGPPHSLAGR*RSHGFAGPCDP
Trigger: AGGATCACATGGACCTGCGAACCCATGTGAACGCCATCGCCCTGCAAGGCTGTGAGGTGGCCCCGGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS CAA 72 bp GAACAGCTTGCCTCCAAGATGGCCACCTCCTGCCGGTaGCGCAGGATCCTGAAGGCAAATGGGTGTCGGGGC +
Preference number: 6 (lower is better)
Translates to: EQLASKMATSCR*RRILKANGCRG
Trigger: GCCCCGACACCCATTTGCCTTCAGGATCCTGCGCAACCGGCAGGAGGTGGCCATCTTGGAGGCAAGCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS CAA 90 bp ATGTCCTCTGAACAGCTTGCCTCCAAGATGGCCACCTCCTGCCGGTaGCGCAGGATCCTGAAGGCAAATGGGTGTCGGGGCCCAAAGCCC +
Preference number: 6 (lower is better)
Translates to: MSSEQLASKMATSCR*RRILKANGCRGPKP
Trigger: GGGCTTTGGGCCCCGACACCCATTTGCCTTCAGGATCCTGCGCAACCGGCAGGAGGTGGCCATCTTGGAGGCAAGCTGTTCAGAGGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS CCA 72 bp CGTTCAGGTAGCCACAGCAGGGAACCTCCTCCTCGGTaGAGGACGTCTGCAGGTCATCGGCCAGTGTCTTCT +
Preference number: 6 (lower is better)
Translates to: RSGSHSREPPPR*RTSAGHRPVSS
Trigger: AGAAGACACTGGCCGATGACCTGCAGACGTCCTCCACCGAGGAGGAGGTTCCCTGCTGTGGCTACCTGAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS CCA 72 bp AGTCCCCAGCCCCACCAAGAGGACCAGAACTTACTGTaGGAGCTGATGTACTCAGGCGACTTGCCGGGTCCC +
Preference number: 6 (lower is better)
Translates to: SPQPHQEDQNLL*ELMYSGDLPGP
Trigger: GGGACCCGGCAAGTCGCCTGAGTACATCAGCTCCCACAGTAAGTTCTGGTCCTCTTGGTGGGGCTGGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508444.1
CDS CAA 90 bp TCCTCGGTGGAGGACGTCTGCAGGTCATCGGCCAGTGTCTTCTTCTaGGAGAAGCCAATGATACGGGTGATCTTGCGGCCCGCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: SSVEDVCRSSASVFF*EKPMIRVILRPAAL
Trigger: CAGGGCTGCGGGCCGCAAGATCACCCGTATCATTGGCTTCTCCAAGAAGAAGACACTGGCCGATGACCTGCAGACGTCCTCCACCGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS GCA 72 bp CCACAGCAGGGAACCTCCTCCTCGGTGGAGGACGTCTaGAGGTCATCGGCCAGTGTCTTCTTCTTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: PQQGTSSSVEDV*RSSASVFFLEK
Trigger: CTTCTCCAAGAAGAAGACACTGGCCGATGACCTGCAGACGTCCTCCACCGAGGAGGAGGTTCCCTGCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS CCA 72 bp ATCTTCTTTTCCAGGGTGGTATCGCTGAGGTACTCGTaGTCCAGGAGGCTGAGCAGCCCGGTGAGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: IFFSRVVSLRYS*SRRLSSPVSSG
Trigger: CCCAGAGCTCACCGGGCTGCTCAGCCTCCTGGACCACGAGTACCTCAGCGATACCACCCTGGAAAAGAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296721.9
ENST00000455574.6
ENST00000515000.1
ENST00000522492.1
CDS CAA 90 bp TCGGCCAGTGTCTTCTTCTTGGAGAAGCCAATGATACGGGTGATCTaGCGGCCCGCAGCCCTGCTCATTGAGCCCTTCAGTTCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: SASVFFLEKPMIRVI*RPAALLIEPFSSAR
Trigger: CCTGGCAGAACTGAAGGGCTCAATGAGCAGGGCTGCGGGCCGCAAGATCACCCGTATCATTGGCTTCTCCAAGAAGAAGACACTGGCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS TCA 72 bp CGTGCCTCTTGTGCCGGCTGTCCTTGGGCACGTAGATaGTGCTGCAGGTATCCAGTGCCAACCTCAGATGTG +
Preference number: 6 (lower is better)
Translates to: RASCAGCPWARR*CCRYPVPTSDV
Trigger: CACATCTGAGGTTGGCACTGGATACCTGCAGCATCATCTACGTGCCCAAGGACAGCCGGCACAAGAGGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000455574.6
ENST00000515000.1
CDS TCA 72 bp AGCCCCACCAAGAGGACCAGAACTTACTGTGGGAGCTaGTGTACTCAGGCGACTTGCCGGGTCCCAGAGGAA +
Preference number: 6 (lower is better)
Translates to: SPTKRTRTYCGS*CTQATCRVPEE
Trigger: TTCCTCTGGGACCCGGCAAGTCGCCTGAGTACATCAGCTCCCACAGTAAGTTCTGGTCCTCTTGGTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508444.1
CDS TCA 72 bp AGGTGCAATCAGCCCAAGGTCCATCAGTGTGGGAGCTaGTGTACTCAGGCGACTTGCCGGGTCCCAGAGGAA +
Preference number: 6 (lower is better)
Translates to: RCNQPKVHQCGS*CTQATCRVPEE
Trigger: TTCCTCTGGGACCCGGCAAGTCGCCTGAGTACATCAGCTCCCACACTGATGGACCTTGGGCTGATTGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522492.1
CDS GCA 72 bp TCCTCTGAACAGCTTGCCTCCAAGATGGCCACCTCCTaGCGGTTGCGCAGGATCCTGAAGGCAAATGGGTGT +
Preference number: 6 (lower is better)
Translates to: SSEQLASKMATS*RLRRILKANGC
Trigger: ACACCCATTTGCCTTCAGGATCCTGCGCAACCGGCAGGAGGTGGCCATCTTGGAGGCAAGCTGTTCAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS GCA 72 bp CCAAGTACCTCCGGGCATCCTCCTCGGCTCGGTTCTTaGCATACTTGTATTGATTGGCACTGGAGGCGTGGC +
Preference number: 6 (lower is better)
Translates to: PSTSGHPPRLGS*HTCIDWHWRRG
Trigger: GCCACGCCTCCAGTGCCAATCAATACAAGTATGGCAAGAACCGAGCCGAGGAGGATGCCCGGAGGTACTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS CCA 72 bp GGCGCTCCTCCTTTGCCCGACACTGAGCTTCCAGGGTaGCCACGGCTTCTTCCAGAGCCTTTAATTTTGCTC +
Preference number: 6 (lower is better)
Translates to: GAPPLPDTELPG*PRLLPEPLILL
Trigger: GAGCAAAATTAAAGGCTCTGGAAGAAGCCGTGGCCACCCTGGAAGCTCAGTGTCGGGCAAAGGAGGAGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS CCA 72 bp AGCCAAAAGGTGCAATCAGCCCAAGGTCCATCAGTGTaGGAGCTGATGTACTCAGGCGACTTGCCGGGTCCC +
Preference number: 6 (lower is better)
Translates to: SQKVQSAQGPSV*ELMYSGDLPGP
Trigger: GGGACCCGGCAAGTCGCCTGAGTACATCAGCTCCCACACTGATGGACCTTGGGCTGATTGCACCTTTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522492.1
CDS CAA 90 bp CAGGCTTGCAGTTCCAGCTCCCACAGGACACAGAGGAACTTAAATTaGGCTTCTCAGGGACAGGAAGTCCCCAGCCCCACCAAGAGGACC +
Preference number: 6 (lower is better)
Translates to: QACSSSSHRTQRNLN*ASQGQEVPSPTKRT
Trigger: GGTCCTCTTGGTGGGGCTGGGGACTTCCTGTCCCTGAGAAGCCAAATTTAAGTTCCTCTGTGTCCTGTGGGAGCTGGAACTGCAAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508444.1
CDS TCA 72 bp GCTTCTCCTAAGCCAATGGTGACATGGTTGGGAGGGTaGCAGGCTTGCAGTTCCAGCTCCCACAGGACACAG +
Preference number: 6 (lower is better)
Translates to: ASPKPMVTWLGG*QACSSSSHRTQ
Trigger: CTGTGTCCTGTGGGAGCTGGAACTGCAAGCCTGTCACCCTCCCAACCATGTCACCATTGGCTTAGGAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508444.1
CDS CAA 72 bp GAGGACGTCTGCAGGTCATCGGCCAGTGTCTTCTTCTaGGAGAAGCCAATGATACGGGTGATCTTGCGGCCC +
Preference number: 6 (lower is better)
Translates to: EDVCRSSASVFF*EKPMIRVILRP
Trigger: GGGCCGCAAGATCACCCGTATCATTGGCTTCTCCAAGAAGAAGACACTGGCCGATGACCTGCAGACGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS TCA 72 bp GTCTGCGTCCTCATAGTAGCCATCCACAATCGAGTGTaGGGGGCTGCAGCCATTGTGGGAGCTGATGTACTC +
Preference number: 6 (lower is better)
Translates to: VCVLIVAIHNRV*GAAAIVGADVL
Trigger: GAGTACATCAGCTCCCACAATGGCTGCAGCCCCTCACACTCGATTGTGGATGGCTACTATGAGGACGCAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000455574.6
ENST00000515000.1
CDS CAA 72 bp GTCTTCTTCTTGGAGAAGCCAATGATACGGGTGATCTaGCGGCCCGCAGCCCTGCTCATTGAGCCCTTCAGT +
Preference number: 6 (lower is better)
Translates to: VFFLEKPMIRVI*RPAALLIEPFS
Trigger: ACTGAAGGGCTCAATGAGCAGGGCTGCGGGCCGCAAGATCACCCGTATCATTGGCTTCTCCAAGAAGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS GCA 72 bp ATTATAGGAGCTCTTAAGCTCGCCGTTCACCCTGGTTaGAGGGTAGCTGCTGTCTGCGTCCTCATAGTAGCC +
Preference number: 6 (lower is better)
Translates to: IIGALKLAVHPG*RVAAVCVLIVA
Trigger: GGCTACTATGAGGACGCAGACAGCAGCTACCCTGCAACCAGGGTGAACGGCGAGCTTAAGAGCTCCTATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296721.9
ENST00000455574.6
ENST00000515000.1
ENST00000522492.1
CDS TCA 72 bp AGGGCGATGGCGTTCACATGGGTTCGCAGGTCCATGTaGTCCTTGTGGAAATACAGAGTGTTGCACTTCAGG +
Preference number: 6 (lower is better)
Translates to: RAMAFTWVRRSM*SLWKYRVLHFR
Trigger: CCTGAAGTGCAACACTCTGTATTTCCACAAGGATCACATGGACCTGCGAACCCATGTGAACGCCATCGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000513665.1
ENST00000515000.1
CDS CCA 72 bp GATGATGCTGCAGGTATCCAGTGCCAACCTCAGATGTaGCTGCCGATCCTTGGAGCTTTTGTAACACAGGAG +
Preference number: 6 (lower is better)
Translates to: DDAAGIQCQPQM*LPILGAFVTQE
Trigger: CTCCTGTGTTACAAAAGCTCCAAGGATCGGCAGCCACATCTGAGGTTGGCACTGGATACCTGCAGCATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296721.9
ENST00000455574.6
ENST00000515000.1
CDS CCA 72 bp CAGTTGACAGGGAGAGGTTGCTCTGGAACGCTGTTCTaGGGTTTATTTGCAGTTTCCCCACTCTTGGGCTTG +
Preference number: 6 (lower is better)
Translates to: QLTGRGCSGTLF*GLFAVSPLLGL
Trigger: CAAGCCCAAGAGTGGGGAAACTGCAAATAAACCCCAGAACAGCGTTCCAGAGCAACCTCTCCCTGTCAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000513665.1
CDS CCA 72 bp CACAGTCAAATTCTTCAAAGAGGGATTCCACGAAGCTaGGCCCCGAGTGGAGGTCTGCTGTGTTCACATACA +
Preference number: 6 (lower is better)
Translates to: HSQILQRGIPRS*APSGGLLCSHT
Trigger: TGTATGTGAACACAGCAGACCTCCACTCGGGGCCCAGCTTCGTGGAATCCCTCTTTGAAGAATTTGACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296721.9
ENST00000455574.6
ENST00000515000.1
ENST00000522492.1
CDS CCA 72 bp CAGCTCAGAAACACAGTTGACAGGGAGAGGTTGCTCTaGAACGCTGTTCTGGGGTTTATTTGCAGTTTCCCC +
Preference number: 6 (lower is better)
Translates to: QLRNTVDRERLL*NAVLGFICSFP
Trigger: GGGGAAACTGCAAATAAACCCCAGAACAGCGTTCCAGAGCAACCTCTCCCTGTCAACTGTGTTTCTGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296721.9
ENST00000513665.1