RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADSS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000185100

Ensembl transcript IDs: ENST00000330877.7, ENST00000332972.9, ENST00000553540.5, ENST00000553580.1, ENST00000554281.1, ENST00000555486.5, ENST00000555674.1, ENST00000555884.6, ENST00000556623.1, ENST00000557271.5, ENST00000557582.5

Found 463 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCTGTGGGGGCAGGTCCTCCCACCTCCTGGCGCCTGTGGTGTCTaGTTTCCACCCAGGCAGCGTTTCATACTCAACTTCGACCTTCTG +
Preference number: 1 (lower is better)
Translates to: GLWGQVLPPPGACGV*FPPRQRFILNFDLL
Trigger: CAGAAGGTCGAAGTTGAGTATGAAACGCTGCCTGGGTGGAAAGCAGACACCACAGGCGCCAGGAGGTGGGAGGACCTGCCCCCACAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR CCA 90 bp AGTTCTGGGCCTGTGGGGGCAGGTCCTCCCACCTCCTGGCGCCTGTaGTGTCTGCTTTCCACCCAGGCAGCGTTTCATACTCAACTTCGA +
Preference number: 1 (lower is better)
Translates to: SSGPVGAGPPTSWRL*CLLSTQAAFHTQLR
Trigger: TCGAAGTTGAGTATGAAACGCTGCCTGGGTGGAAAGCAGACACCACAGGCGCCAGGAGGTGGGAGGACCTGCCCCCACAGGCCCAGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR GCA 90 bp GGTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTaGTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGA +
Preference number: 1 (lower is better)
Translates to: GFPALVLVVAAEERD*CCLHKSRRCQGLLG
Trigger: TCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
3UTR TCA 90 bp ATGTCCAGCTTCGTCAGGGCCAGCGCAGTGAATCCGTTGACCATGTaGGCATATCTTAGAATCATCAGGTCGAGCCAGCCGCAGCGCCTC +
Preference number: 1 (lower is better)
Translates to: MSSFVRASAVNPLTM*AYLRIIRSSQPQRL
Trigger: GAGGCGCTGCGGCTGGCTCGACCTGATGATTCTAAGATATGCTCACATGGTCAACGGATTCACTGCGCTGGCCCTGACGAAGCTGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR GCA 90 bp TTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTaGTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCA +
Preference number: 1 (lower is better)
Translates to: FPALVLVVAAEERDC*CLHKSRRCQGLLGS
Trigger: TGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
3UTR GCA 90 bp GCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTaGCAGGGCCTGTTGGGATCAGCTCAGTCTGTGACTAAAACAGCT +
Preference number: 1 (lower is better)
Translates to: AAEERDCCCLHKSRR*QGLLGSAQSVTKTA
Trigger: AGCTGTTTTAGTCACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR TCA 90 bp AAATGGTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTaGCTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTT +
Preference number: 1 (lower is better)
Translates to: KWFSCFGVGCGGRGT*LLLFTQVQTLPGPV
Trigger: AACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAACCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
3UTR TCA 90 bp CTGGTTAGCTGGGAAATAGGGAATCCTTTTCCCGTTCAGCTTGTATaGGACACCGACTTTAACCTCACCCAGTACGTCCAGGATGTCCAG +
Preference number: 1 (lower is better)
Translates to: LVSWEIGNPFPVQLV*DTDFNLTQYVQDVQ
Trigger: CTGGACATCCTGGACGTACTGGGTGAGGTTAAAGTCGGTGTCTCATACAAGCTGAACGGGAAAAGGATTCCCTATTTCCCAGCTAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR CCA 90 bp CACAAAGGGGTAGGTCCCGAAGTCAATGTCGAGGAGGGCGGCGTTGGCACCCTCGTGGGGAACATCGACTaGTGCTGGTGGGCCAGGTTC +
Preference number: 2 (lower is better)
Translates to: HKGVGPEVNVEEGGVGTLVGNID*CWWARF
Trigger: GAACCTGGCCCACCAGCACCAGTCGATGTTCCCCAC...GAGGGTGCCAACGCCGCCCTCCTCGACATTGACTTCGGGACCTACCCCTTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR GCA 90 bp TCACCCAGTACGTCCAGGATGTCCAGCTTCGTCAGGGCCAGCGCAGTGAATCCGGGGAACATCGACTGGTaGTGGTGGGCCAGGTTCTTG +
Preference number: 2 (lower is better)
Translates to: SPSTSRMSSFVRASAVNPGNIDW*WWARFL
Trigger: CAAGAACCTGGCCCACCAGCACCAGTCGATGTTCCC...CGGATTCACTGCGCTGGCCCTGACGAAGCTGGACATCCTGGACGTACTGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR CCA 90 bp GCCTCCAATCTCGTTGATCTGCTCGGTGGGGAAGGCCCCGATGCCCACACGTGTTTCCTGCTTTGGTGTTaGTTGTGGCGGCCGAGGAAC +
Preference number: 2 (lower is better)
Translates to: ASNLVDLLGGEGPDAHTCFLLWC*LWRPRN
Trigger: GTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA...ACACGTGTGGGCATCGGGGCCTTCCCCACCGAGCAGATCAACGAGATTGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR GCA 90 bp TTCGGCTGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCGGATGCCCAGGCCCGTaGACACACCGCCCACGGTGC +
Preference number: 2 (lower is better)
Translates to: FGWTRNHVTLMCHRRSLSGCPGP*THRPRC
Trigger: GCACCGTGGGCGGTGTGTGCACGGGCCTGGGCATCC...GCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR GCA 90 bp GACACCGACTTTAACCTCACCCAGTACGTCCAGGATGTCCAGCTTCGTCAGGGCCCAATCTCGTTGATCTaGTCGGTGGGGAAGGCCCCG +
Preference number: 2 (lower is better)
Translates to: DTDFNLTQYVQDVQLRQGPISLI*SVGKAP
Trigger: CGGGGCCTTCCCCACCGAGCAGATCAACGAGATTGG...GCCCTGACGAAGCTGGACATCCTGGACGTACTGGGTGAGGTTAAAGTCGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR GCA 90 bp GGCCTGTTGGGATCAGCTCAGTCTGTGACTAAAACAGCTGGATCATCGACTCTCTCGTGGCCGCGGGTCTaGAGCAGGCCTCCAATCTCG +
Preference number: 2 (lower is better)
Translates to: GLLGSAQSVTKTAGSSTLSWPRV*SRPPIS
Trigger: CGAGATTGGAGGCCTGCTGCAGACCCGCGGCCACGA...GAGAGTCGATGATCCAGCTGTTTTAGTCACAGACTGAGCTGATCCCAACAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR TCA 90 bp GGCCTGTTGGGATCAGCTCAGTCTGTGACTAAAACAGCTGGATCATCGACTCTCCTCGGACCATGGGTCTaGTCCGCTCAGCAAAGCCCT +
Preference number: 2 (lower is better)
Translates to: GLLGSAQSVTKTAGSSTLLGPWV*SAQQSP
Trigger: AGGGCTTTGCTGAGCGGATCAGACCCATGGTCCGAG...GAGAGTCGATGATCCAGCTGTTTTAGTCACAGACTGAGCTGATCCCAACAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR GCA 90 bp GACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTACACACCGCCCACGGTaGAGTTGGATGAAGTCACAA +
Preference number: 2 (lower is better)
Translates to: DCCCLHKSRRCQGLLGSATHRPR*SWMKSQ
Trigger: TTGTGACTTCATCCAACTGCACCGTGGGCGGTGTGT...AGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR CAA 90 bp CGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTaGGGATCAGCTCAGTCTGTGACTAAAACAGCTGGATCATCGACT +
Preference number: 2 (lower is better)
Translates to: RDCCCLHKSRRCQGL*GSAQSVTKTAGSST
Trigger: AGTCGATGATCCAGCTGTTTTAGTCACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR GCA 90 bp CAGTGGCCATTGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTCACAAGTCCAGACGCTaGCAGGGCCTGTTGGGATCA +
Preference number: 2 (lower is better)
Translates to: QWPLEMFITLLRLDTQPCHKSRR*QGLLGS
Trigger: TGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTG...ACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCAATGGCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
3UTR-3UTR CCA 90 bp CGTGATTCTCCACAAAGCGGATGTAGTTCTGGGCCTGTGGGGGCAGGTCCTCCCCATCTCCTGGTTAGCTaGGAAATAGGGAATCCTTTT +
Preference number: 2 (lower is better)
Translates to: RDSPQSGCSSGPVGAGPPHLLVS*EIGNPF
Trigger: AAAAGGATTCCCTATTTCCCAGCTAACCAGGAGATG...GGGAGGACCTGCCCCCACAGGCCCAGAACTACATCCGCTTTGTGGAGAATCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR GCA 90 bp AGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGACTAAAACAGCTGGAGAGGAACGTGACTGCTaGTGTTTACACAAGTCCAGA +
Preference number: 2 (lower is better)
Translates to: RRCQGLLGSAQSVTKTAGEERDC*CLHKSR
Trigger: TCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTC...TCCAGCTGTTTTAGTCACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR CCA 90 bp TTCGGCTGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCCGCCCACGGTGCAGTTaGATGAAGTCACAAAGGGGT +
Preference number: 2 (lower is better)
Translates to: FGWTRNHVTLMCHRRSLSRPRCS*MKSQRG
Trigger: ACCCCTTTGTGACTTCATCCAACTGCACCGTGGGCG...GCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR TCA 90 bp ACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGCTGGCGGCCGAGGAACGTaGCTGCTGCTGTTTACACAA +
Preference number: 2 (lower is better)
Translates to: TRNHVTLMCHRRSLSTLAGGRGT*LLLFTQ
Trigger: TTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCC...AGCCAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
3UTR-3UTR GCA 90 bp GGCTGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTGCCGAGGAACGTGACTaGTGCTGTTTACACAAGTCC +
Preference number: 2 (lower is better)
Translates to: GWTRNHVTLMCHRRSLSTAEERD*CCLHKS
Trigger: GGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGC...AGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
3UTR-3UTR GCA 90 bp GTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTAGATGTTTATTACACTaGTTCGGCTGGACACGCAAC +
Preference number: 2 (lower is better)
Translates to: VFLLWCWLWRPRNVTAAVRCLLH*FGWTRN
Trigger: GTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCT...AACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
3UTR-3UTR CCA 90 bp GGCCTGTTGGGATCAGCTCAGTCTGTGACTAAAACAGCTGGATCATCGACTCTCTTACACTGCTTCGGCTaGACACGCAACCATGTGACA +
Preference number: 2 (lower is better)
Translates to: GLLGSAQSVTKTAGSSTLLHCFG*TRNHVT
Trigger: TGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAA...GAGAGTCGATGATCCAGCTGTTTTAGTCACAGACTGAGCTGATCCCAACAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR TCA 90 bp TTCGGCTGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCCCCGTTCAGCTTGTATaGGACACCGACTTTAACCTC +
Preference number: 2 (lower is better)
Translates to: FGWTRNHVTLMCHRRSLSPVQLV*DTDFNL
Trigger: GAGGTTAAAGTCGGTGTCTCATACAAGCTGAACGGG...GCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR GCA 90 bp ACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGCTGCCGAGGAACGTGACTaGTGCTGTTTACACAAGTCC +
Preference number: 2 (lower is better)
Translates to: TRNHVTLMCHRRSLSTLAAEERD*CCLHKS
Trigger: GGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGC...AGCCAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
3UTR-3UTR CCA 90 bp ATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGTCAATCGACTGGTGCTGGTaGGCCAGGTTCTTGAATCTG +
Preference number: 2 (lower is better)
Translates to: MFITLLRLDTQPCDTNVSIDWCW*ARFLNL
Trigger: CAGATTCAAGAACCTGGCCCACCAGCACCAGTCGAT...TGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR TCA 90 bp TGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGGTCATAGAAGGTCTCTaGGCACTTTGGCTCATTTTG +
Preference number: 2 (lower is better)
Translates to: WRCLLHCFGWTRNHVTLMVIEGL*ALWLIL
Trigger: CAAAATGAGCCAAAGTGCTCAGAGACCTTCTATGAC...CATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
3UTR GCA 72 bp CTGCCTGTGGTCACTCCCCACTCGTGGCCGCGGGTCTaGAGCAGGCCTCCAATCTCGTTGATCTGCTCGGTG +
Preference number: 3 (lower is better)
Translates to: LPVVTPHSWPRV*SRPPISLICSV
Trigger: CACCGAGCAGATCAACGAGATTGGAGGCCTGCTGCAGACCCGCGGCCACGAGTGGGGAGTGACCACAGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR GCA 72 bp GGGCAGGTCCTCCCACCTCCTGGCGCCTGTGGTGTCTaGTTTCCACCCAGGCAGCGTTTCATACTCAACTTC +
Preference number: 3 (lower is better)
Translates to: GQVLPPPGACGV*FPPRQRFILNF
Trigger: GAAGTTGAGTATGAAACGCTGCCTGGGTGGAAAGCAGACACCACAGGCGCCAGGAGGTGGGAGGACCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR CAA 90 bp CCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACCGCTGCCAGGGCCTGTaGGGATCAGCTCAGTCTGTG +
Preference number: 3 (lower is better)
Translates to: PALVLVVAAEERDCCCLHRCQGL*GSAQSV
Trigger: CACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCG...GTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
3UTR-3UTR CAA 90 bp GATTCTCCACAAAGCGGATGTAGTTCTGGGCCTGTGGGGGCAGGTCCTCCCACCAGGCCTCCAATCTCGTaGATCTGCTCGGTGGGGAAG +
Preference number: 3 (lower is better)
Translates to: DSPQSGCSSGPVGAGPPTRPPIS*ICSVGK
Trigger: CTTCCCCACCGAGCAGATCAACGAGATTGGAGGCCT...GGTGGGAGGACCTGCCCCCACAGGCCCAGAACTACATCCGCTTTGTGGAGAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR TCA 72 bp CAGGCCCGTGCACACACCGCCCACGGTGCAGTTGGATaGAGTCACAAAGGGGTAGGTCCCGAAGTCAATGTC +
Preference number: 3 (lower is better)
Translates to: QARAHTAHGAVG*SHKGVGPEVNV
Trigger: GACATTGACTTCGGGACCTACCCCTTTGTGACTTCATCCAACTGCACCGTGGGCGGTGTGTGCACGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR GCA 72 bp GCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTaGTGCTGTTTACACAAGTCCAGACGCTGCCAGGGC +
Preference number: 3 (lower is better)
Translates to: ALVLVVAAEERD*CCLHKSRRCQG
Trigger: GCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
3UTR CCA 72 bp TCTGCTCGGTGGGGAAGGCCCCGATGCCCACACGTGTaGTATAGGCTTTCACCACGCCATACACGTCACCTA +
Preference number: 3 (lower is better)
Translates to: SARWGRPRCPHV*YRLSPRHTRHL
Trigger: TAGGTGACGTGTATGGCGTGGTGAAAGCCTATACCACACGTGTGGGCATCGGGGCCTTCCCCACCGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR CAA 90 bp GTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTCGCTGCCAGGGCCTGTaGGGATCAGCTCAGTCTGTG +
Preference number: 3 (lower is better)
Translates to: VFLLWCWLWRPRNVTAAVRCQGL*GSAQSV
Trigger: CACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCG...AACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
3UTR-3UTR CAA 90 bp GCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGCGCTGCCAGGGCCTGTaGGGATCAGCTCAGTCTGTG +
Preference number: 3 (lower is better)
Translates to: ALVLVVAAEERDCCCLHKRCQGL*GSAQSV
Trigger: CACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCG...CTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
3UTR-3UTR CAA 90 bp TCACCCAGTACGTCCAGGATGTCCAGCTTCGTCAGGGCCAGCGCAGTGAATCCGCGCTCAGCAAAGCCCTaGAGCCTTTTGAGTTGGCCT +
Preference number: 3 (lower is better)
Translates to: SPSTSRMSSFVRASAVNPRSAKP*SLLSWP
Trigger: AGGCCAACTCAAAAGGCTCAAGGGCTTTGCTGAGCG...CGGATTCACTGCGCTGGCCCTGACGAAGCTGGACATCCTGGACGTACTGGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR TCA 72 bp TCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTaGCTGCTGCTGTTTACACAAGTCCAGACGCTGCCA +
Preference number: 3 (lower is better)
Translates to: SCFGVGCGGRGT*LLLFTQVQTLP
Trigger: TGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
3UTR-3UTR CAA 90 bp AGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGACTAAAACAGCTGGATTTCCTGCTTTGGTGTaGGTTGTGGCGGCCGAGGAA +
Preference number: 3 (lower is better)
Translates to: RRCQGLLGSAQSVTKTAGFPALV*VVAAEE
Trigger: TTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAA...TCCAGCTGTTTTAGTCACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR CAA 90 bp AAGCATCTCCTGGTTAGCTGGGAAATAGGGAATCCTTTTCCCGTTCAGCTTGTATCGAGGAGGGCGGCGTaGGCACCCTCCACCAGGATC +
Preference number: 3 (lower is better)
Translates to: KHLLVSWEIGNPFPVQLVSRRAA*APSTRI
Trigger: GATCCTGGTGGAGGGTGCCAACGCCGCCCTCCTCGA...TACAAGCTGAACGGGAAAAGGATTCCCTATTTCCCAGCTAACCAGGAGATGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR GCA 72 bp GAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTaGCAGGGCCTGTTGGGATCAGCTCAGTCTGTGACT +
Preference number: 3 (lower is better)
Translates to: ERDCCCLHKSRR*QGLLGSAQSVT
Trigger: AGTCACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR TCA 72 bp TTCGTCAGGGCCAGCGCAGTGAATCCGTTGACCATGTaGGCATATCTTAGAATCATCAGGTCGAGCCAGCCG +
Preference number: 3 (lower is better)
Translates to: FVRASAVNPLTM*AYLRIIRSSQP
Trigger: CGGCTGGCTCGACCTGATGATTCTAAGATATGCTCACATGGTCAACGGATTCACTGCGCTGGCCCTGACGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR CAA 90 bp TCACCCAGTACGTCCAGGATGTCCAGCTTCGTCAGGGCCAGCGCAGTGAATCCGCTTGAGCCTTTTGAGTaGGCCTTCAATGTCTATTTC +
Preference number: 3 (lower is better)
Translates to: SPSTSRMSSFVRASAVNPLEPFE*AFNVYF
Trigger: GAAATAGACATTGAAGGCCAACTCAAAAGGCTCAAG...CGGATTCACTGCGCTGGCCCTGACGAAGCTGGACATCCTGGACGTACTGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR-3UTR CAA 90 bp ACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGCTCTGCTTTGGTGTTGGTaGTGGCGGCCGAGGAACGTG +
Preference number: 3 (lower is better)
Translates to: TRNHVTLMCHRRSLSTLALLWCW*WRPRNV
Trigger: CACGTTCCTCGGCCGCCACAACCAACACCAAAGCAG...AGCCAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
3UTR-3UTR CAA 90 bp AACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGCTCATTTTCGCTGCCAGGGCCTGTaGGGATCAGCTCAGTCTGTG +
Preference number: 3 (lower is better)
Translates to: NHVTLMCHRRSLSTLAHFRCQGL*GSAQSV
Trigger: CACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCG...AAAATGAGCCAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
3UTR-3UTR CAA 90 bp TGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGAATGGTTTTCCTGCTTaGGTGTTGGTTGTGGCGGCC +
Preference number: 3 (lower is better)
Translates to: WTRNHVTLMCHRRSLSTLNGFPA*VLVVAA
Trigger: GGCCGCCACAACCAACACCAAAGCAGGAAAACCATT...CAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
3UTR-3UTR CAA 90 bp ACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGCTAATGGTTTTCCTGCTTaGGTGTTGGTTGTGGCGGCC +
Preference number: 3 (lower is better)
Translates to: TRNHVTLMCHRRSLSTLANGFPA*VLVVAA
Trigger: GGCCGCCACAACCAACACCAAAGCAGGAAAACCATT...AGCCAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
3UTR-3UTR CAA 90 bp TTCGGCTGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCAAGCCCTTGAGCCTTTaGAGTTGGCCTTCAATGTCT +
Preference number: 3 (lower is better)
Translates to: FGWTRNHVTLMCHRRSLSKPLSL*SWPSMS
Trigger: AGACATTGAAGGCCAACTCAAAAGGCTCAAGGGCTT...GCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553540.5
3UTR TCA 72 bp TGGGAAATAGGGAATCCTTTTCCCGTTCAGCTTGTATaGGACACCGACTTTAACCTCACCCAGTACGTCCAG +
Preference number: 3 (lower is better)
Translates to: WEIGNPFPVQLV*DTDFNLTQYVQ
Trigger: CTGGACGTACTGGGTGAGGTTAAAGTCGGTGTCTCATACAAGCTGAACGGGAAAAGGATTCCCTATTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR GCA 90 bp CCTGTGGTCACTCCCCACTCGTGGCCGCGGGTCTGCAGCAGGCCTCCAATCTCGCTCTGCCCACCTCCTTaGCTCTGGGTTGCCACCCCA +
Preference number: 4 (lower is better)
Translates to: PVVTPHSWPRVCSRPPISLCPPP*LWVATP
Trigger: TGGGGTGGCAACCCAGAGGCAAGGAGGTGGGCAGAG...CGAGATTGGAGGCCTGCTGCAGACCCGCGGCCACGAGTGGGGAGTGACCACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR CCA 90 bp CAGCAGGCCTCCAATCTCGTTGATCTGCTCGGTGGGGAAGGCCCCGATGCCCACCTCCTGCAGTCCTCCTaGGCAGGCAGGTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QQASNLVDLLGGEGPDAHLLQSS*AGRCGL
Trigger: GAGGCCACACCTGCCTGCCCAGGAGGACTGCAGGAG...GTGGGCATCGGGGCCTTCCCCACCGAGCAGATCAACGAGATTGGAGGCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR GCA 90 bp TTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCGGATGCCCAGGCCCGTaGACACACCGCCCACGGTGC +
Preference number: 4 (lower is better)
Translates to: LVVAAEERDCCCLHKSRRGCPGP*THRPRC
Trigger: GCACCGTGGGCGGTGTGTGCACGGGCCTGGGCATCC...GCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp GGTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTGTCACTCCCCACTCGTaGCCGCGGGTCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GFPALVLVVAAEERDCCCVTPHS*PRVCSR
Trigger: CCTGCTGCAGACCCGCGGCCACGAGTGGGGAGTGAC...ACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp TGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGCAGCGTCACCCTAGTTaGGCCTCCACAGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: WRPRNVTAAVYTSPDAARQRHPS*ASTGTG
Trigger: CCCAGTGCCTGTGGAGGCCCAACTAGGGTGACGCTG...CCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp TGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGCCACCCCGTTGCCAATaGAGGACACGGCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: WRPRNVTAAVYTSPDAARPPRCQ*RTRPWC
Trigger: ACACCAAGGCCGTGTCCTTCATTGGCAACGGGGTGG...CCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp GACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTACAGGAGGTCGCAGATaGGGAGGCCTGTCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: DCCCLHKSRRCQGLLGSATGGRR*GGLSGQ
Trigger: CTGCCCGGACAGGCCTCCGCATCTGCGACCTCCTGT...AGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp GGTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTCGTGGCCGCGGGTCTaGAGCAGGCCTCCAATCTCG +
Preference number: 4 (lower is better)
Translates to: GFPALVLVVAAEERDCCCSWPRV*SRPPIS
Trigger: CGAGATTGGAGGCCTGCTGCAGACCCGCGGCCACGA...ACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp TGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGTGGGGAACATCGACTaGTGCTGGTGGGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: WRPRNVTAAVYTSPDAARVGNID*CWWARF
Trigger: GAACCTGGCCCACCAGCACCAGTCGATGTTCCCCAC...CCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp CTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGTCACTCCCCACTCGTaGCCGCGGGTCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LFTQVQTLPGPVGISSVCVTPHS*PRVCSR
Trigger: CCTGCTGCAGACCCGCGGCCACGAGTGGGGAGTGAC...ACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp GCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGGCGCTGCACTTCCTaGAGTCCGTCGACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AVYTSPDAARACWDQLSLWRCTS*SPSTAW
Trigger: CCAGGCTGTCGACGGACTTCAGGAAGTGCAGCGCCA...CAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330877.7
ENST00000332972.9
CDS-3UTR TCA 90 bp GCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTGTGGCCTCCTGCATTTaGCCCGTGGCTCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: AAVYTSPDAARACWDQLSVASCI*PVAPPS
Trigger: GCTTGGAGGAGCCACGGGTCAAATGCAGGAGGCCAC...ACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp TTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCGTGGCCTCCTGCATTTaGCCCGTGGCTCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: LVVAAEERDCCCLHKSRRVASCI*PVAPPS
Trigger: GCTTGGAGGAGCCACGGGTCAAATGCAGGAGGCCAC...GCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp CCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTGAAGCACACAGGAGATaGGTGGGGCCCACAGACCTC +
Preference number: 4 (lower is better)
Translates to: PRNVTAAVYTSPDAARACEAHRR*VGPTDL
Trigger: GAGGTCTGTGGGCCCCACTCATCTCCTGTGTGCTTC...ACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555674.1
CDS-3UTR GCA 90 bp CCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACCGCAGCGCCTCTTCCTaGCTGTGGTCACTCCCCACT +
Preference number: 4 (lower is better)
Translates to: PALVLVVAAEERDCCCLHRSASS*LWSLPT
Trigger: AGTGGGGAGTGACCACAGGCAGGAAGAGGCGCTGCG...GTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp GACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTGGCGCCTGTGGTGTCTaGTTTCCACCCAGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: DCCCLHKSRRCQGLLGSAGACGV*FPPRQR
Trigger: ACGCTGCCTGGGTGGAAAGCAGACACCACAGGCGCC...AGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR GCA 90 bp TTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCGGCGCCTGTGGTGTCTaGTTTCCACCCAGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: LVVAAEERDCCCLHKSRRGACGV*FPPRQR
Trigger: ACGCTGCCTGGGTGGAAAGCAGACACCACAGGCGCC...GCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR GCA 90 bp TGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGGCGCCTGTGGTGTCTaGTTTCCACCCAGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: WLWRPRNVTAAVYTSPDAGACGV*FPPRQR
Trigger: ACGCTGCCTGGGTGGAAAGCAGACACCACAGGCGCC...AGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR GCA 90 bp CCTGTGGTCACTCCCCACTCGTGGCCGCGGGTCTGCAGCAGGCCTCCAATCTCGGAGGAACGTGACTGCTaGTGTTTACACAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PVVTPHSWPRVCSRPPISEERDC*CLHKSR
Trigger: TCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTC...CGAGATTGGAGGCCTGCTGCAGACCCGCGGCCACGAGTGGGGAGTGACCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR GCA 90 bp CTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTCCTTGCCTCTGGGTTaGCACCCCACAGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LLFTQVQTLPGPVGISSVSLPLG*HPTAPP
Trigger: GGGAGGAGCTGTGGGGTGGCAACCCAGAGGCAAGGA...GACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp CTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTAGTTCTGGGCCTGTaGGGGCAGGTCCTCCCACCT +
Preference number: 4 (lower is better)
Translates to: LLLFTQVQTLPGPVGISSVVLGL*GQVLPP
Trigger: AGGTGGGAGGACCTGCCCCCACAGGCCCAGAACTAC...TGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CCA 90 bp GGTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTGTAGTTCTGGGCCTGTaGGGGCAGGTCCTCCCACCT +
Preference number: 4 (lower is better)
Translates to: GFPALVLVVAAEERDCCCVVLGL*GQVLPP
Trigger: AGGTGGGAGGACCTGCCCCCACAGGCCCAGAACTAC...ACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CCA 90 bp CCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACTCAGGGCCAGGTTCGTaGGCCTCTGCCCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: PALVLVVAAEERDCCCLHSGPGS*ASAHLL
Trigger: AAGGAGGTGGGCAGAGGCCCACGAACCTGGCCCTGA...GTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp CGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCACTCGGACCATGGGTCTaGTCCGCTCAGCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: RDCCCLHKSRRCQGLLGSLGPWV*SAQQSP
Trigger: AGGGCTTTGCTGAGCGGATCAGACCCATGGTCCGAG...TGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp TTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCCTCGGACCATGGGTCTaGTCCGCTCAGCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LVVAAEERDCCCLHKSRRLGPWV*SAQQSP
Trigger: AGGGCTTTGCTGAGCGGATCAGACCCATGGTCCGAG...GCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp TTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCCTCGGGTCCCCGACATaGTGGCTTGGCTCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: LVLVVAAEERDCCCLHKSLGSPT*WLGSSA
Trigger: AGCGGAAGAGCCAAGCCAGCATGTCGGGGACCCGAG...GGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330877.7
CDS-3UTR GCA 90 bp CGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCATGGGGAAGGCCCCGATaGCCACACGTGTGGTATAGG +
Preference number: 4 (lower is better)
Translates to: RDCCCLHKSRRCQGLLGSWGRPR*PHVWYR
Trigger: CCTATACCACACGTGTGGGCATCGGGGCCTTCCCCA...TGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp CTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTCGCAGCGCCTCTTCCTaGCTGTGGTCACTCCCCACT +
Preference number: 4 (lower is better)
Translates to: LFTQVQTLPGPVGISSVCRSASS*LWSLPT
Trigger: AGTGGGGAGTGACCACAGGCAGGAAGAGGCGCTGCG...ACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp TGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCACGCAGCGCCTCTTCCTaGCTGTGGTCACTCCCCACT +
Preference number: 4 (lower is better)
Translates to: WCWLWRPRNVTAAVYTSPRSASS*LWSLPT
Trigger: AGTGGGGAGTGACCACAGGCAGGAAGAGGCGCTGCG...TGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp CTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGGCGCCTGTGGTGTCTaGTTTCCACCCAGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: LFTQVQTLPGPVGISSVCGACGV*FPPRQR
Trigger: ACGCTGCCTGGGTGGAAAGCAGACACCACAGGCGCC...ACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR GCA 90 bp TTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCTCCTTGCCTCTGGGTTaGCACCCCACAGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LVLVVAAEERDCCCLHKSSLPLG*HPTAPP
Trigger: GGGAGGAGCTGTGGGGTGGCAACCCAGAGGCAAGGA...GGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp TTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACCTCTGCCCACCTCCTTaGCTCTGGGTTGCCACCCCA +
Preference number: 4 (lower is better)
Translates to: FLLWCWLWRPRNVTAAVYLCPPP*LWVATP
Trigger: TGGGGTGGCAACCCAGAGGCAAGGAGGTGGGCAGAG...GTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp CTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTAGGTTCGTGGGCCTCTaGCCACCTCCTTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LFTQVQTLPGPVGISSVCRFVGL*PPPCLW
Trigger: CCAGAGGCAAGGAGGTGGGCAGAGGCCCACGAACCT...ACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp AGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGACTAAAACAGCTGGAAGGTTCGTGGGCCTCTaGCCACCTCCTTGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RRCQGLLGSAQSVTKTAGRFVGL*PPPCLW
Trigger: CCAGAGGCAAGGAGGTGGGCAGAGGCCCACGAACCT...TCCAGCTGTTTTAGTCACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR CCA 90 bp CCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACGTGGGGAACATCGACTaGTGCTGGTGGGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PALVLVVAAEERDCCCLHVGNID*CWWARF
Trigger: GAACCTGGCCCACCAGCACCAGTCGATGTTCCCCAC...GTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp CGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAACCTCCTGGCGCCTGTaGTGTCTGCTTTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: RDCCCLHKSRRCQGLLGSTSWRL*CLLSTQ
Trigger: CTGGGTGGAAAGCAGACACCACAGGCGCCAGGAGGT...TGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CCA 90 bp TTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCGTAGTTCTGGGCCTGTaGGGGCAGGTCCTCCCACCT +
Preference number: 4 (lower is better)
Translates to: LVLVVAAEERDCCCLHKSVVLGL*GQVLPP
Trigger: AGGTGGGAGGACCTGCCCCCACAGGCCCAGAACTAC...GGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CCA 90 bp GCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGGTAGTTCTGGGCCTGTaGGGGCAGGTCCTCCCACCT +
Preference number: 4 (lower is better)
Translates to: ALVLVVAAEERDCCCLHKVVLGL*GQVLPP
Trigger: AGGTGGGAGGACCTGCCCCCACAGGCCCAGAACTAC...CTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CCA 90 bp TGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGCTTTGGTGTTGGTTGTaGCGGCCGAGGAACGTGACT +
Preference number: 4 (lower is better)
Translates to: WRPRNVTAAVYTSPDAARLWCWL*RPRNVT
Trigger: AGTCACGTTCCTCGGCCGCCACAACCAACACCAAAG...CCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CCA 90 bp TTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACTCAGGGCCAGGTTCGTaGGCCTCTGCCCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: FLLWCWLWRPRNVTAAVYSGPGS*ASAHLL
Trigger: AAGGAGGTGGGCAGAGGCCCACGAACCTGGCCCTGA...GTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp CTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTCAGCGTCACCCTAGTTaGGCCTCCACAGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: LFTQVQTLPGPVGISSVCQRHPS*ASTGTG
Trigger: CCCAGTGCCTGTGGAGGCCCAACTAGGGTGACGCTG...ACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp TTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGACCTGGGCAGGCAGGTGTaGCCTCCTGCATTTGACCCG +
Preference number: 4 (lower is better)
Translates to: FTQVQTLPGPVGISSVCDLGRQV*PPAFDP
Trigger: CGGGTCAAATGCAGGAGGCCACACCTGCCTGCCCAG...GTCACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR CCA 90 bp TTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACTCCTGCAGTCCTCCTaGGCAGGCAGGTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: FPALVLVVAAEERDCCCLLLQSS*AGRCGL
Trigger: GAGGCCACACCTGCCTGCCCAGGAGGACTGCAGGAG...TAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp TTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACCCACCCCGTTGCCAATaGAGGACACGGCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: FLLWCWLWRPRNVTAAVYPPRCQ*RTRPWC
Trigger: ACACCAAGGCCGTGTCCTTCATTGGCAACGGGGTGG...GTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp CTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTCTCGGACCATGGGTCTaGTCCGCTCAGCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LFTQVQTLPGPVGISSVCLGPWV*SAQQSP
Trigger: AGGGCTTTGCTGAGCGGATCAGACCCATGGTCCGAG...ACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp TTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACGGCCTCCAATCTCGTTaGTCTGCTCGGTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FLLWCWLWRPRNVTAAVYGLQSR*SARWGR
Trigger: CCTTCCCCACCGAGCAGATCAACGAGATTGGAGGCC...GTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp GTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTGGCCTCCAATCTCGTTaGTCTGCTCGGTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VFLLWCWLWRPRNVTAAVGLQSR*SARWGR
Trigger: CCTTCCCCACCGAGCAGATCAACGAGATTGGAGGCC...AACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp GCCTCCAATCTCGTTGATCTGCTCGGTGGGGAAGGCCCCGATGCCCACACGTGTGATCATCGACTCTCTTaGCTTGCCAACACCAACCCA +
Preference number: 4 (lower is better)
Translates to: ASNLVDLLGGEGPDAHTCDHRLS*LANTNP
Trigger: TGGGTTGGTGTTGGCAAGTCAAGAGAGTCGATGATC...ACACGTGTGGGCATCGGGGCCTTCCCCACCGAGCAGATCAACGAGATTGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR TCA 90 bp GACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTGGCGGCCGAGGAACGTaGCTGCTGCTGTTTACACAA +
Preference number: 4 (lower is better)
Translates to: DCCCLHKSRRCQGLLGSAGGRGT*LLLFTQ
Trigger: TTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCC...AGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR TCA 90 bp AGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGACTAAAACAGCTGGATGGCGCTGCACTTCCTaGAGTCCGTCGACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RRCQGLLGSAQSVTKTAGWRCTS*SPSTAK
Trigger: CTTGGCTGTCGACGGACTTCAGGAAGTGCAGCGCCA...TCCAGCTGTTTTAGTCACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR GCA 90 bp GGTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTGGGAACATCGACTGGTaGTGGTGGGCCAGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: GFPALVLVVAAEERDCCCGNIDW*WWARFL
Trigger: CAAGAACCTGGCCCACCAGCACCAGTCGATGTTCCC...ACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp TGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGGGGAACATCGACTGGTaGTGGTGGGCCAGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: CCCLHKSRRCQGLLGSAQGNIDW*WWARFL
Trigger: CAAGAACCTGGCCCACCAGCACCAGTCGATGTTCCC...CTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp GTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGATGGGGAAGGCCCCGATaGCCACACGTGTGGTATAGG +
Preference number: 4 (lower is better)
Translates to: VLVVAAEERDCCCLHKSRWGRPR*PHVWYR
Trigger: CCTATACCACACGTGTGGGCATCGGGGCCTTCCCCA...TCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp CCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACCACAAGTCCAGACGCTaGCAGGGCCTGTTGGGATCA +
Preference number: 4 (lower is better)
Translates to: PALVLVVAAEERDCCCLHHKSRR*QGLLGS
Trigger: TGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTG...GTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR GCA 90 bp CTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCCACAAGTCCAGACGCTaGCAGGGCCTGTTGGGATCA +
Preference number: 4 (lower is better)
Translates to: LLFTQVQTLPGPVGISSVHKSRR*QGLLGS
Trigger: TGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTG...GACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR GCA 90 bp GCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCACAAGTCCAGACGCTaGCAGGGCCTGTTGGGATCA +
Preference number: 4 (lower is better)
Translates to: AAVYTSPDAARACWDQLSHKSRR*QGLLGS
Trigger: TGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTG...ACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR GCA 90 bp GCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGCACAAGTCCAGACGCTaGCAGGGCCTGTTGGGATCA +
Preference number: 4 (lower is better)
Translates to: AVYTSPDAARACWDQLSLHKSRR*QGLLGS
Trigger: TGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTG...CAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CCA 90 bp GTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTGTGGGGAACATCGACTaGTGCTGGTGGGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VFLLWCWLWRPRNVTAAVVGNID*CWWARF
Trigger: GAACCTGGCCCACCAGCACCAGTCGATGTTCCCCAC...AACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp CCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTCGCCCACGGTGCAGTTaGATGAAGTCACAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: PRNVTAAVYTSPDAARACRPRCS*MKSQRG
Trigger: ACCCCTTTGTGACTTCATCCAACTGCACCGTGGGCG...ACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp TTCGGCTGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCGTCACTCCCCACTCGTaGCCGCGGGTCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FGWTRNHVTLMCHRRSLSVTPHS*PRVCSR
Trigger: CCTGCTGCAGACCCGCGGCCACGAGTGGGGAGTGAC...GCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp TTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTAGCCTCTTCCTGCCTGTaGTCACTCCCCACTCGTGGC +
Preference number: 4 (lower is better)
Translates to: FPALVLVVAAEERDCCCLASSCL*SLPTRG
Trigger: GCCACGAGTGGGGAGTGACCACAGGCAGGAAGAGGC...TAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp GCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGACCTCCTGGCGCCTGTaGTGTCTGCTTTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: ALVLVVAAEERDCCCLHKTSWRL*CLLSTQ
Trigger: CTGGGTGGAAAGCAGACACCACAGGCGCCAGGAGGT...CTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR TCA 90 bp TGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGACTGCGACTCCCACGTaGTTCTCCACAAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: CCCLHKSRRCQGLLGSAQTATPT*FSTKRM
Trigger: CATCCGCTTTGTGGAGAATCACGTGGGAGTCGCAGT...CTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR TCA 90 bp CTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGGCGGCCGAGGAACGTaGCTGCTGCTGTTTACACAA +
Preference number: 4 (lower is better)
Translates to: LFTQVQTLPGPVGISSVCGGRGT*LLLFTQ
Trigger: TTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCC...ACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR TCA 90 bp TGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGGGCGGCCGAGGAACGTaGCTGCTGCTGTTTACACAA +
Preference number: 4 (lower is better)
Translates to: CLHKSRRCQGLLGSAQSVGGRGT*LLLFTQ
Trigger: TTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCC...CACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR GCA 90 bp GTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTGGGAACATCGACTGGTaGTGGTGGGCCAGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: VFLLWCWLWRPRNVTAAVGNIDW*WWARFL
Trigger: CAAGAACCTGGCCCACCAGCACCAGTCGATGTTCCC...AACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp GAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGGGATGCCCAGGCCCGTaGACACACCGCCCACGGTGC +
Preference number: 4 (lower is better)
Translates to: EMFITLLRLDTQPCDTNVGCPGP*THRPRC
Trigger: GCACCGTGGGCGGTGTGTGCACGGGCCTGGGCATCC...CACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp TCAGTGGCCATTGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTCGTGGCCGCGGGTCTaGAGCAGGCCTCCAATCTCG +
Preference number: 4 (lower is better)
Translates to: SVAIGDVYYTASAGHATMSWPRV*SRPPIS
Trigger: CGAGATTGGAGGCCTGCTGCAGACCCGCGGCCACGA...CATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCAATGGCCACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330877.7
ENST00000332972.9
CDS-3UTR GCA 90 bp CAGTGGCCATTGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTTCGTGGCCGCGGGTCTaGAGCAGGCCTCCAATCTCG +
Preference number: 4 (lower is better)
Translates to: QWPLEMFITLLRLDTQPCSWPRV*SRPPIS
Trigger: CGAGATTGGAGGCCTGCTGCAGACCCGCGGCCACGA...ACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCAATGGCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp GTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACATCCAGGGCCTCCTTaGCTAGGGACTCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: VLVVAAEERDCCCLHKSRHPGPP*LGTQLQ
Trigger: TTGCAGCTGAGTCCCTAGGCAAGGAGGCCCTGGATG...TCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555674.1
CDS-3UTR CCA 90 bp TGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGAACAAGCCTGGCAAGTaGATGACCACCCCGTTGCCA +
Preference number: 4 (lower is better)
Translates to: CCCLHKSRRCQGLLGSAQNKPGK*MTTPLP
Trigger: TGGCAACGGGGTGGTCATCCACTTGCCAGGCTTGTT...CTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp CTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCACTGTCCGGGCAGCTTTaGAAGAGTAGGTTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: LLLFTQVQTLPGPVGISSLSGQL*KSRLVR
Trigger: TCGGACCAACCTACTCTTCCAAAGCTGCCCGGACAG...TGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp CTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCCGCCCACGGTGCAGTTaGATGAAGTCACAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LLFTQVQTLPGPVGISSVRPRCS*MKSQRG
Trigger: ACCCCTTTGTGACTTCATCCAACTGCACCGTGGGCG...GACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp CGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCACTTTGGTGTTGGTTGTaGCGGCCGAGGAACGTGACT +
Preference number: 4 (lower is better)
Translates to: RDCCCLHKSRRCQGLLGSLWCWL*RPRNVT
Trigger: AGTCACGTTCCTCGGCCGCCACAACCAACACCAAAG...TGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CCA 90 bp TGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTCTTTGGTGTTGGTTGTaGCGGCCGAGGAACGTGACT +
Preference number: 4 (lower is better)
Translates to: WLWRPRNVTAAVYTSPDALWCWL*RPRNVT
Trigger: AGTCACGTTCCTCGGCCGCCACAACCAACACCAAAG...AGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CCA 90 bp GGTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTCTTTGGTGTTGGTTGTaGCGGCCGAGGAACGTGACT +
Preference number: 4 (lower is better)
Translates to: GFPALVLVVAAEERDCCCLWCWL*RPRNVT
Trigger: AGTCACGTTCCTCGGCCGCCACAACCAACACCAAAG...ACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CCA 90 bp GCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTTTCCTGCTTTGGTGTTaGTTGTGGCGGCCGAGGAAC +
Preference number: 4 (lower is better)
Translates to: AAVYTSPDAARACWDQLSFLLWC*LWRPRN
Trigger: GTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA...ACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CCA 90 bp CCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTATGGTTTTCCTGCTTTaGTGTTGGTTGTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: PRNVTAAVYTSPDAARACMVFLL*CWLWRP
Trigger: CGGCCGCCACAACCAACACCAAAGCAGGAAAACCAT...ACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR TCA 90 bp CGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCACCGTCGACAGCCTGGTaGAAATCAAACACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: RDCCCLHKSRRCQGLLGSPSTAW*KSNTRW
Trigger: CCACCTTGTGTTTGATTTTCACCAGGCTGTCGACGG...TGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330877.7
ENST00000332972.9
CDS-3UTR TCA 90 bp GGCCTGTTGGGATCAGCTCAGTCTGTGACTAAAACAGCTGGATCATCGACTCTCGGCCTCCAATCTCGTTaGTCTGCTCGGTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GLLGSAQSVTKTAGSSTLGLQSR*SARWGR
Trigger: CCTTCCCCACCGAGCAGATCAACGAGATTGGAGGCC...GAGAGTCGATGATCCAGCTGTTTTAGTCACAGACTGAGCTGATCCCAACAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR TCA 90 bp TGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGACTGCGACTCCCACGTaGTTCTCCACAAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: CLHKSRRCQGLLGSAQSVTATPT*FSTKRM
Trigger: CATCCGCTTTGTGGAGAATCACGTGGGAGTCGCAGT...CACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR TCA 90 bp CCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTGATCATCGACTCTCTTaGCTTGCCAACACCAACCCA +
Preference number: 4 (lower is better)
Translates to: PRNVTAAVYTSPDAARACDHRLS*LANTNP
Trigger: TGGGTTGGTGTTGGCAAGTCAAGAGAGTCGATGATC...ACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR TCA 90 bp TGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGGCACGTGGCCCAGTTTaGTTTTCTCAGTGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: CCCLHKSRRCQGLLGSAQARGPV*FSQCWV
Trigger: CACCCAACACTGAGAAAATCAAACTGGGCCACGTGC...CTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555674.1
ENST00000556623.1
CDS-3UTR TCA 90 bp TTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTAGAAGCGGATATTTGGTaGCACGGCCACCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: FPALVLVVAAEERDCCCLEADIW*HGHPHP
Trigger: TGGATGGGGGTGGCCGTGTCACCAAATATCCGCTTC...TAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555674.1
CDS-3UTR GCA 90 bp GCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGACACACCGCCCACGGTaGAGTTGGATGAAGTCACAA +
Preference number: 4 (lower is better)
Translates to: AVYTSPDAARACWDQLSLTHRPR*SWMKSQ
Trigger: TTGTGACTTCATCCAACTGCACCGTGGGCGGTGTGT...CAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp ATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGTCAGGATGCCCAGGCCCGTaGACACACCGCCCACGGTGC +
Preference number: 4 (lower is better)
Translates to: MFITLLRLDTQPCDTNVSGCPGP*THRPRC
Trigger: GCACCGTGGGCGGTGTGTGCACGGGCCTGGGCATCC...TGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp TGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGAGGAACGTGACTGCTaGTGTTTACACAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: WRPRNVTAAVYTSPDAAREERDC*CLHKSR
Trigger: TCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTC...CCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR GCA 90 bp CCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACGCCGAGGAACGTGACTaGTGCTGTTTACACAAGTCC +
Preference number: 4 (lower is better)
Translates to: PALVLVVAAEERDCCCLHAEERD*CCLHKS
Trigger: GGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGC...GTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CCA 90 bp TTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACCGCTGGGCAGCAGGTaGAAGTCGTACTCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: FPALVLVVAAEERDCCCLPLGSR*KSYSFP
Trigger: TGGGAAAGAGTACGACTTCCACCTGCTGCCCAGCGG...TAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp GTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTAACAAGCCTGGCAAGTaGATGACCACCCCGTTGCCA +
Preference number: 4 (lower is better)
Translates to: VFLLWCWLWRPRNVTAAVNKPGK*MTTPLP
Trigger: TGGCAACGGGGTGGTCATCCACTTGCCAGGCTTGTT...AACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp TGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGCGATTCCCTTCTTGGTaGTGCCTATATTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: WRPRNVTAAVYTSPDAARRFPSW*CLYSSP
Trigger: AGGGGAAGAATATAGGCACCACCAAGAAGGGAATCG...CCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp CTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTCTGTCCGGGCAGCTTTaGAAGAGTAGGTTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: LFTQVQTLPGPVGISSVCLSGQL*KSRLVR
Trigger: TCGGACCAACCTACTCTTCCAAAGCTGCCCGGACAG...ACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp CTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCATCGACTGGTGCTGGTaGGCCAGGTTCTTGAATCTG +
Preference number: 4 (lower is better)
Translates to: LLFTQVQTLPGPVGISSVIDWCW*ARFLNL
Trigger: CAGATTCAAGAACCTGGCCCACCAGCACCAGTCGAT...GACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp CCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGTCTATTTCCAGGGTaGGGAACATCGACTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PRNVTAAVYTSPDAARACCLFPG*GTSTGA
Trigger: AGCACCAGTCGATGTTCCCCACCCTGGAAATAGACA...ACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp TTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACCGATGCCCACACGTGTaGTATAGGCTTTCACCACGC +
Preference number: 4 (lower is better)
Translates to: FLLWCWLWRPRNVTAAVYRCPHV*YRLSPR
Trigger: GCGTGGTGAAAGCCTATACCACACGTGTGGGCATCG...GTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp CTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTCGATGCCCACACGTGTaGTATAGGCTTTCACCACGC +
Preference number: 4 (lower is better)
Translates to: LFTQVQTLPGPVGISSVCRCPHV*YRLSPR
Trigger: GCGTGGTGAAAGCCTATACCACACGTGTGGGCATCG...ACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp AGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGACTAAAACAGCTGGACGATGCCCACACGTGTaGTATAGGCTTTCACCACGC +
Preference number: 4 (lower is better)
Translates to: RRCQGLLGSAQSVTKTAGRCPHV*YRLSPR
Trigger: GCGTGGTGAAAGCCTATACCACACGTGTGGGCATCG...TCCAGCTGTTTTAGTCACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR CCA 90 bp TTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACTTCCTGCTTTGGTGTTaGTTGTGGCGGCCGAGGAAC +
Preference number: 4 (lower is better)
Translates to: FLLWCWLWRPRNVTAAVYFLLWC*LWRPRN
Trigger: GTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA...GTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CCA 90 bp CCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACATGGTTTTCCTGCTTTaGTGTTGGTTGTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: PALVLVVAAEERDCCCLHMVFLL*CWLWRP
Trigger: CGGCCGCCACAACCAACACCAAAGCAGGAAAACCAT...GTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CCA 90 bp TGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCACACACAGGAGATGAGTaGGGCCCACAGACCTCCTAT +
Preference number: 4 (lower is better)
Translates to: WCWLWRPRNVTAAVYTSPHTGDE*GPQTSY
Trigger: ATAGGAGGTCTGTGGGCCCCACTCATCTCCTGTGTG...TGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555674.1
CDS-3UTR TCA 90 bp TGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCACCGTCGACAGCCTGGTaGAAATCAAACACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: WCWLWRPRNVTAAVYTSPPSTAW*KSNTRW
Trigger: CCACCTTGTGTTTGATTTTCACCAGGCTGTCGACGG...TGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330877.7
ENST00000332972.9
CDS-3UTR TCA 90 bp TGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCACACGGTGCAGTTGGATaGAGTCACAAAGGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: WCWLWRPRNVTAAVYTSPHGAVG*SHKGVG
Trigger: ACCTACCCCTTTGTGACTTCATCCAACTGCACCGTG...TGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp GTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTCACGGTGCAGTTGGATaGAGTCACAAAGGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: VFLLWCWLWRPRNVTAAVHGAVG*SHKGVG
Trigger: ACCTACCCCTTTGTGACTTCATCCAACTGCACCGTG...AACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp TTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTAACTGCGACTCCCACGTaGTTCTCCACAAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: FPALVLVVAAEERDCCCLTATPT*FSTKRM
Trigger: CATCCGCTTTGTGGAGAATCACGTGGGAGTCGCAGT...TAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR TCA 90 bp GCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGGATCATCGACTCTCTTaGCTTGCCAACACCAACCCA +
Preference number: 4 (lower is better)
Translates to: AVYTSPDAARACWDQLSLDHRLS*LANTNP
Trigger: TGGGTTGGTGTTGGCAAGTCAAGAGAGTCGATGATC...CAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR TCA 90 bp CTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGCACGTGGCCCAGTTTaGTTTTCTCAGTGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: LFTQVQTLPGPVGISSVCARGPV*FSQCWV
Trigger: CACCCAACACTGAGAAAATCAAACTGGGCCACGTGC...ACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555674.1
ENST00000556623.1
CDS-3UTR GCA 90 bp GTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGAACACACCGCCCACGGTaGAGTTGGATGAAGTCACAA +
Preference number: 4 (lower is better)
Translates to: VLVVAAEERDCCCLHKSRTHRPR*SWMKSQ
Trigger: TTGTGACTTCATCCAACTGCACCGTGGGCGGTGTGT...TCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp GGCTGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTCCAATCTCGTTGATCTaGTCGGTGGGGAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GWTRNHVTLMCHRRSLSTPISLI*SVGKAP
Trigger: CGGGGCCTTCCCCACCGAGCAGATCAACGAGATTGG...AGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp GCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTACCAACCCATTTGACTaGGACTCCCACGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: AAVYTSPDAARACWDQLSTNPFD*DSHVIL
Trigger: GAGAATCACGTGGGAGTCGCAGTCAAATGGGTTGGT...ACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR GCA 90 bp GTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTGCCGAGGAACGTGACTaGTGCTGTTTACACAAGTCC +
Preference number: 4 (lower is better)
Translates to: VFLLWCWLWRPRNVTAAVAEERD*CCLHKS
Trigger: GGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGC...AACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR GCA 90 bp TGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGGCCGAGGAACGTGACTaGTGCTGTTTACACAAGTCC +
Preference number: 4 (lower is better)
Translates to: CLHKSRRCQGLLGSAQSVAEERD*CCLHKS
Trigger: GGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGC...CACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR GCA 90 bp TTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACGCCGAGGAACGTGACTaGTGCTGTTTACACAAGTCC +
Preference number: 4 (lower is better)
Translates to: FLLWCWLWRPRNVTAAVYAEERD*CCLHKS
Trigger: GGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGC...GTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CCA 90 bp AAAGTAAACACCATCTCGGACCATGGGTCTGATCCGCTCAGCAAAGCCCTTGAGCCGCTGGGCAGCAGGTaGAAGTCGTACTCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: KVNTISDHGSDPLSKALEPLGSR*KSYSFP
Trigger: TGGGAAAGAGTACGACTTCCACCTGCTGCCCAGCGG...CTCAAGGGCTTTGCTGAGCGGATCAGACCCATGGTCCGAGATGGTGTTTACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR CCA 90 bp TTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCTTCCTCAAACAAGCCTaGCAAGTGGATGACCACCCC +
Preference number: 4 (lower is better)
Translates to: LVLVVAAEERDCCCLHKSFLKQA*QVDDHP
Trigger: GGGGTGGTCATCCACTTGCCAGGCTTGTTTGAGGAA...GGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp TTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCATCGACTGGTGCTGGTaGGCCAGGTTCTTGAATCTG +
Preference number: 4 (lower is better)
Translates to: LVLVVAAEERDCCCLHKSIDWCW*ARFLNL
Trigger: CAGATTCAAGAACCTGGCCCACCAGCACCAGTCGAT...GGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp TGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTTGTCTATTTCCAGGGTaGGGAACATCGACTGGTGCT +
Preference number: 4 (lower is better)
Translates to: WLWRPRNVTAAVYTSPDACLFPG*GTSTGA
Trigger: AGCACCAGTCGATGTTCCCCACCCTGGAAATAGACA...AGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp CTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCATTACACTGCTTCGGCTaGACACGCAACCATGTGACA +
Preference number: 4 (lower is better)
Translates to: LLLFTQVQTLPGPVGISSLHCFG*TRNHVT
Trigger: TGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAA...TGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR TCA 90 bp TGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGGCGCTGCACTTCCTaGAGTCCGTCGACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: WRCLLHCFGWTRNHVTLMWRCTS*SPSTAW
Trigger: CCAGGCTGTCGACGGACTTCAGGAAGTGCAGCGCCA...CATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330877.7
ENST00000332972.9
CDS-3UTR TCA 90 bp GCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGAAACTCATCAAAATCTaGCAGGAGGTCGCAGATGCG +
Preference number: 4 (lower is better)
Translates to: AVYTSPDAARACWDQLSLKLIKI*QEVADA
Trigger: CGCATCTGCGACCTCCTGTCAGATTTTGATGAGTTT...CAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp TGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGCCCGTTCAGCTTGTATaGGACACCGACTTTAACCTC +
Preference number: 4 (lower is better)
Translates to: CLHKSRRCQGLLGSAQSVPVQLV*DTDFNL
Trigger: GAGGTTAAAGTCGGTGTCTCATACAAGCTGAACGGG...CACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp CTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTCCCGTTCAGCTTGTATaGGACACCGACTTTAACCTC +
Preference number: 4 (lower is better)
Translates to: LFTQVQTLPGPVGISSVCPVQLV*DTDFNL
Trigger: GAGGTTAAAGTCGGTGTCTCATACAAGCTGAACGGG...ACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp GACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTTCAACTTCGACCTTCTaGAGCATCTCCTGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: DCCCLHKSRRCQGLLGSASTSTF*SISWLA
Trigger: AGCTAACCAGGAGATGCTTCAGAAGGTCGAAGTTGA...AGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR TCA 90 bp GTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTGATCATCGACTCTCTTaGCTTGCCAACACCAACCCA +
Preference number: 4 (lower is better)
Translates to: VFLLWCWLWRPRNVTAAVDHRLS*LANTNP
Trigger: TGGGTTGGTGTTGGCAAGTCAAGAGAGTCGATGATC...AACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR TCA 90 bp TTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACGATCATCGACTCTCTTaGCTTGCCAACACCAACCCA +
Preference number: 4 (lower is better)
Translates to: FLLWCWLWRPRNVTAAVYDHRLS*LANTNP
Trigger: TGGGTTGGTGTTGGCAAGTCAAGAGAGTCGATGATC...GTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR GCA 90 bp TGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGGGCGCCTGTGGTGTCTaGTTTCCACCCAGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: WRCLLHCFGWTRNHVTLMGACGV*FPPRQR
Trigger: ACGCTGCCTGGGTGGAAAGCAGACACCACAGGCGCC...CATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CCA 90 bp TTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTATTCCTCAAACAAGCCTaGCAAGTGGATGACCACCCC +
Preference number: 4 (lower is better)
Translates to: FPALVLVVAAEERDCCCLFLKQA*QVDDHP
Trigger: GGGGTGGTCATCCACTTGCCAGGCTTGTTTGAGGAA...TAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp TGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGGTCCGATTCCCTTCTTaGTGGTGCCTATATTCTTCC +
Preference number: 4 (lower is better)
Translates to: CCCLHKSRRCQGLLGSAQVRFPS*WCLYSS
Trigger: GGAAGAATATAGGCACCACCAAGAAGGGAATCGGAC...CTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp TGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGTCCGATTCCCTTCTTaGTGGTGCCTATATTCTTCC +
Preference number: 4 (lower is better)
Translates to: WLWRPRNVTAAVYTSPDAVRFPS*WCLYSS
Trigger: GGAAGAATATAGGCACCACCAAGAAGGGAATCGGAC...AGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp GCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTGTCCGATTCCCTTCTTaGTGGTGCCTATATTCTTCC +
Preference number: 4 (lower is better)
Translates to: AAVYTSPDAARACWDQLSVRFPS*WCLYSS
Trigger: GGAAGAATATAGGCACCACCAAGAAGGGAATCGGAC...ACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp ACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGCTGCCTCTTCCTGCCTGTaGTCACTCCCCACTCGTGGC +
Preference number: 4 (lower is better)
Translates to: TRNHVTLMCHRRSLSTLAASSCL*SLPTRG
Trigger: GCCACGAGTGGGGAGTGACCACAGGCAGGAAGAGGC...AGCCAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp GAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGGCCTCTTCCTGCCTGTaGTCACTCCCCACTCGTGGC +
Preference number: 4 (lower is better)
Translates to: EMFITLLRLDTQPCDTNVASSCL*SLPTRG
Trigger: GCCACGAGTGGGGAGTGACCACAGGCAGGAAGAGGC...CACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp TGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGTAGTTCTGGGCCTGTaGGGGCAGGTCCTCCCACCT +
Preference number: 4 (lower is better)
Translates to: WTRNHVTLMCHRRSLSTLVVLGL*GQVLPP
Trigger: AGGTGGGAGGACCTGCCCCCACAGGCCCAGAACTAC...CAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CCA 90 bp GTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTTACACTGCTTCGGCTaGACACGCAACCATGTGACA +
Preference number: 4 (lower is better)
Translates to: VFLLWCWLWRPRNVTAAVLHCFG*TRNHVT
Trigger: TGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAA...AACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CCA 90 bp TGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCACAGCAAGTGGGCACGTaGCCCAGTTTGATTTTCTCA +
Preference number: 4 (lower is better)
Translates to: WCWLWRPRNVTAAVYTSPQQVGT*PSLIFS
Trigger: TGAGAAAATCAAACTGGGCCACGTGCCCACTTGCTG...TGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CCA 90 bp AAAGTAAACACCATCTCGGACCATGGGTCTGATCCGCTCAGCAAAGCCCTTGAGCGTCGACAGCCAAGGTaGGCTCTGTCAGAGATGATG +
Preference number: 4 (lower is better)
Translates to: KVNTISDHGSDPLSKALERRQPR*ALSEMM
Trigger: CATCATCTCTGACAGAGCCCACCTTGGCTGTCGACG...CTCAAGGGCTTTGCTGAGCGGATCAGACCCATGGTCCGAGATGGTGTTTACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR TCA 90 bp GAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGCCACCCCGTTGCCAATaGAGGACACGGCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: EMFITLLRLDTQPCDTNVPPRCQ*RTRPWC
Trigger: ACACCAAGGCCGTGTCCTTCATTGGCAACGGGGTGG...CACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp GTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGAAAACTCATCAAAATCTaGCAGGAGGTCGCAGATGCG +
Preference number: 4 (lower is better)
Translates to: VLVVAAEERDCCCLHKSRKLIKI*QEVADA
Trigger: CGCATCTGCGACCTCCTGTCAGATTTTGATGAGTTT...TCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp GCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCAACTTCGACCTTCTaGAGCATCTCCTGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: ALVLVVAAEERDCCCLHKSTSTF*SISWLA
Trigger: AGCTAACCAGGAGATGCTTCAGAAGGTCGAAGTTGA...CTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR TCA 90 bp TTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCGATCAGCTCAGTCTGTaGCTAAAACAGCTGGATCAT +
Preference number: 4 (lower is better)
Translates to: LVVAAEERDCCCLHKSRRDQLSL*LKQLDH
Trigger: ATGATCCAGCTGTTTTAGTCACAGACTGAGCTGATC...GCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR TCA 90 bp TTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCGTCATAGAAGGTCTCTaGGCACTTTGGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: LVVAAEERDCCCLHKSRRVIEGL*ALWLIL
Trigger: CAAAATGAGCCAAAGTGCTCAGAGACCTTCTATGAC...GCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR TCA 90 bp TGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGACCAACCCATTTGACTaGGAGAGCAGAAAAGACTGT +
Preference number: 4 (lower is better)
Translates to: CCCLHKSRRCQGLLGSAQTNPFD*ESRKDC
Trigger: ACAGTCTTTTCTGCTCTCTCAGTCAAATGGGTTGGT...CTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555674.1
CDS-3UTR GCA 90 bp ACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGCTTGGGGAAGGCCCCGATaGCCACACGTGTGGTATAGG +
Preference number: 4 (lower is better)
Translates to: TRNHVTLMCHRRSLSTLAWGRPR*PHVWYR
Trigger: CCTATACCACACGTGTGGGCATCGGGGCCTTCCCCA...AGCCAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp TGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGCCAATCTCGTTGATCTaGTCGGTGGGGAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: WTRNHVTLMCHRRSLSTLPISLI*SVGKAP
Trigger: CGGGGCCTTCCCCACCGAGCAGATCAACGAGATTGG...CAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp GTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGAGAGGAACGTGACTGCTaGTGTTTACACAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: VLVVAAEERDCCCLHKSREERDC*CLHKSR
Trigger: TCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTC...TCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR GCA 90 bp GGTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTAGATGTTTATTACACTaGTTCGGCTGGACACGCAAC +
Preference number: 4 (lower is better)
Translates to: GFPALVLVVAAEERDCCCRCLLH*FGWTRN
Trigger: GTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCT...ACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR GCA 90 bp CTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAAGATGTTTATTACACTaGTTCGGCTGGACACGCAAC +
Preference number: 4 (lower is better)
Translates to: LLLFTQVQTLPGPVGISSRCLLH*FGWTRN
Trigger: GTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCT...TGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CCA 90 bp TGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGCGATTCCCTTCTTGGTaGTGCCTATATTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: CLHKSRRCQGLLGSAQSVRFPSW*CLYSSP
Trigger: AGGGGAAGAATATAGGCACCACCAAGAAGGGAATCG...CACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp GACTTTAACCTCACCCAGTACGTCCAGGATGTCCAGCTTCGTCAGGGCCAGCGCCATCTCCTGGTTAGCTaGGAAATAGGGAATCCTTTT +
Preference number: 4 (lower is better)
Translates to: DFNLTQYVQDVQLRQGQRHLLVS*EIGNPF
Trigger: AAAAGGATTCCCTATTTCCCAGCTAACCAGGAGATG...GCGCTGGCCCTGACGAAGCTGGACATCCTGGACGTACTGGGTGAGGTTAAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR CCA 90 bp ACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGCTACCTCCTGGCGCCTGTaGTGTCTGCTTTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: TRNHVTLMCHRRSLSTLATSWRL*CLLSTQ
Trigger: CTGGGTGGAAAGCAGACACCACAGGCGCCAGGAGGT...AGCCAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CCA 90 bp TGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGACCTCCTGGCGCCTGTaGTGTCTGCTTTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: WTRNHVTLMCHRRSLSTLTSWRL*CLLSTQ
Trigger: CTGGGTGGAAAGCAGACACCACAGGCGCCAGGAGGT...CAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CCA 90 bp TTCGGCTGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCCTTTGGTGTTGGTTGTaGCGGCCGAGGAACGTGACT +
Preference number: 4 (lower is better)
Translates to: FGWTRNHVTLMCHRRSLSLWCWL*RPRNVT
Trigger: AGTCACGTTCCTCGGCCGCCACAACCAACACCAAAG...GCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CCA 90 bp TTCGGCTGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCTTCCTGCTTTGGTGTTaGTTGTGGCGGCCGAGGAAC +
Preference number: 4 (lower is better)
Translates to: FGWTRNHVTLMCHRRSLSFLLWC*LWRPRN
Trigger: GTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA...GCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CCA 90 bp ATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGTCACTGGGCAGGCAGGTGTaGCCTCCTGCATTTGACCCG +
Preference number: 4 (lower is better)
Translates to: MFITLLRLDTQPCDTNVSLGRQV*PPAFDP
Trigger: CGGGTCAAATGCAGGAGGCCACACCTGCCTGCCCAG...TGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp TGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGAGCAGGGGACAGCAGTaGGGCTCAGACACTACACGC +
Preference number: 4 (lower is better)
Translates to: WRCLLHCFGWTRNHVTLMSRGQQ*GSDTTR
Trigger: GCGTGTAGTGTCTGAGCCCCACTGCTGTCCCCTGCT...CATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556623.1
CDS-3UTR CCA 90 bp TTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACAGCAAGTGGGCACGTaGCCCAGTTTGATTTTCTCA +
Preference number: 4 (lower is better)
Translates to: FPALVLVVAAEERDCCCLQQVGT*PSLIFS
Trigger: TGAGAAAATCAAACTGGGCCACGTGCCCACTTGCTG...TAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555674.1
ENST00000556623.1
CDS-3UTR TCA 90 bp CAGTGGCCATTGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTCACGGTGCAGTTGGATaGAGTCACAAAGGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: QWPLEMFITLLRLDTQPCHGAVG*SHKGVG
Trigger: ACCTACCCCTTTGTGACTTCATCCAACTGCACCGTG...ACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCAATGGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp TTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTATCAACTTCGACCTTCTaGAGCATCTCCTGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: FPALVLVVAAEERDCCCLSTSTF*SISWLA
Trigger: AGCTAACCAGGAGATGCTTCAGAAGGTCGAAGTTGA...TAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR TCA 90 bp CTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGATCAGCTCAGTCTGTaGCTAAAACAGCTGGATCAT +
Preference number: 4 (lower is better)
Translates to: LFTQVQTLPGPVGISSVCDQLSL*LKQLDH
Trigger: ATGATCCAGCTGTTTTAGTCACAGACTGAGCTGATC...ACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR TCA 90 bp CTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGTCATAGAAGGTCTCTaGGCACTTTGGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: LFTQVQTLPGPVGISSVCVIEGL*ALWLIL
Trigger: CAAAATGAGCCAAAGTGCTCAGAGACCTTCTATGAC...ACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR TCA 90 bp GTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTGTCATAGAAGGTCTCTaGGCACTTTGGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: VFLLWCWLWRPRNVTAAVVIEGL*ALWLIL
Trigger: CAAAATGAGCCAAAGTGCTCAGAGACCTTCTATGAC...AACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR TCA 90 bp TTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACCAACACCAACCCATTTaGCTGAGAGAGCAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: FLLWCWLWRPRNVTAAVYQHQPI*LREQKR
Trigger: TCTTTTCTGCTCTCTCAGTCAAATGGGTTGGTGTTG...GTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555674.1
CDS-3UTR GCA 90 bp TTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACTTCCCTTCTTGGTGGTaGCTATATTCTTCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: FLLWCWLWRPRNVTAAVYFPSWW*LYSSPL
Trigger: AAGAGGGGAAGAATATAGGCACCACCAAGAAGGGAA...GTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp TGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCATTCCCTTCTTGGTGGTaGCTATATTCTTCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: WCWLWRPRNVTAAVYTSPFPSWW*LYSSPL
Trigger: AAGAGGGGAAGAATATAGGCACCACCAAGAAGGGAA...TGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp AAAGTAAACACCATCTCGGACCATGGGTCTGATCCGCTCAGCAAAGCCCTTGAGACCAACCCATTTGACTaGGACTCCCACGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: KVNTISDHGSDPLSKALETNPFD*DSHVIL
Trigger: GAGAATCACGTGGGAGTCGCAGTCAAATGGGTTGGT...CTCAAGGGCTTTGCTGAGCGGATCAGACCCATGGTCCGAGATGGTGTTTACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR GCA 90 bp TCAGTGGCCATTGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGGCCGAGGAACGTGACTaGTGCTGTTTACACAAGTCC +
Preference number: 4 (lower is better)
Translates to: SVAIGDVYYTASAGHATMAEERD*CCLHKS
Trigger: GGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGC...CATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCAATGGCCACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000556623.1
CDS-3UTR CCA 90 bp GAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGCCGCTGGGCAGCAGGTaGAAGTCGTACTCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: EMFITLLRLDTQPCDTNVPLGSR*KSYSFP
Trigger: TGGGAAAGAGTACGACTTCCACCTGCTGCCCAGCGG...CACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp CTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCAAATCAAACACAAGGTaGGCTCTGTCAGAGATGATG +
Preference number: 4 (lower is better)
Translates to: LLFTQVQTLPGPVGISSVKSNTR*ALSEMM
Trigger: CATCATCTCTGACAGAGCCCACCTTGTGTTTGATTT...GACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330877.7
ENST00000332972.9
CDS-3UTR CCA 90 bp GGCTGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTATGGTTTTCCTGCTTTaGTGTTGGTTGTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GWTRNHVTLMCHRRSLSTMVFLL*CWLWRP
Trigger: CGGCCGCCACAACCAACACCAAAGCAGGAAAACCAT...AGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR TCA 90 bp GAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGACTGCGACTCCCACGTaGTTCTCCACAAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: EMFITLLRLDTQPCDTNVTATPT*FSTKRM
Trigger: CATCCGCTTTGTGGAGAATCACGTGGGAGTCGCAGT...CACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR TCA 90 bp ACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGCTACTGCGACTCCCACGTaGTTCTCCACAAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: TRNHVTLMCHRRSLSTLATATPT*FSTKRM
Trigger: CATCCGCTTTGTGGAGAATCACGTGGGAGTCGCAGT...AGCCAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR TCA 90 bp TGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGTCATGGCGGCCGAGGAACGTaGCTGCTGCTGTTTACACAA +
Preference number: 4 (lower is better)
Translates to: CLLHCFGWTRNHVTLMCHGGRGT*LLLFTQ
Trigger: TTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCC...ATGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR GCA 90 bp TCAGTGGCCATTGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGACCAACCCATTTGACTaGGACTCCCACGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: SVAIGDVYYTASAGHATMTNPFD*DSHVIL
Trigger: GAGAATCACGTGGGAGTCGCAGTCAAATGGGTTGGT...CATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCAATGGCCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000556623.1
CDS-3UTR CCA 90 bp TGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGCTGTCCGGGCAGCTTTaGAAGAGTAGGTTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: WRCLLHCFGWTRNHVTLMLSGQL*KSRLVR
Trigger: TCGGACCAACCTACTCTTCCAAAGCTGCCCGGACAG...CATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp GGCTGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTGTCTATTTCCAGGGTaGGGAACATCGACTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GWTRNHVTLMCHRRSLSTCLFPG*GTSTGA
Trigger: AGCACCAGTCGATGTTCCCCACCCTGGAAATAGACA...AGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp TGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGCATCTCCTGGTTAGCTaGGAAATAGGGAATCCTTTT +
Preference number: 4 (lower is better)
Translates to: CLHKSRRCQGLLGSAQSVHLLVS*EIGNPF
Trigger: AAAAGGATTCCCTATTTCCCAGCTAACCAGGAGATG...CACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp GAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGTTCCTGCTTTGGTGTTaGTTGTGGCGGCCGAGGAAC +
Preference number: 4 (lower is better)
Translates to: EMFITLLRLDTQPCDTNVFLLWC*LWRPRN
Trigger: GTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA...CACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR TCA 90 bp GTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGAAATCCGTTGACCATGTaGGCATATCTTAGAATCATC +
Preference number: 4 (lower is better)
Translates to: VLVVAAEERDCCCLHKSRNPLTM*AYLRII
Trigger: GATGATTCTAAGATATGCTCACATGGTCAACGGATT...TCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp CAATGTCTATTTCCAGGGTGGGGAACATCGACTGGTGCTGGTGGGCCAGGTTCTAATCCGTTGACCATGTaGGCATATCTTAGAATCATC +
Preference number: 4 (lower is better)
Translates to: QCLFPGWGTSTGAGGPGSNPLTM*AYLRII
Trigger: GATGATTCTAAGATATGCTCACATGGTCAACGGATT...AGAACCTGGCCCACCAGCACCAGTCGATGTTCCCCACCCTGGAAATAGACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR TCA 90 bp CTGTTGGGATCAGCTCAGTCTGTGACTAAAACAGCTGGATCATCGACTCTCTTGCCCGTTCAGCTTGTATaGGACACCGACTTTAACCTC +
Preference number: 4 (lower is better)
Translates to: LLGSAQSVTKTAGSSTLLPVQLV*DTDFNL
Trigger: GAGGTTAAAGTCGGTGTCTCATACAAGCTGAACGGG...CAAGAGAGTCGATGATCCAGCTGTTTTAGTCACAGACTGAGCTGATCCCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR TCA 90 bp CAGTGGCCATTGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTTCAACTTCGACCTTCTaGAGCATCTCCTGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: QWPLEMFITLLRLDTQPCSTSTF*SISWLA
Trigger: AGCTAACCAGGAGATGCTTCAGAAGGTCGAAGTTGA...ACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCAATGGCCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR GCA 90 bp GAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGACACACCGCCCACGGTaGAGTTGGATGAAGTCACAA +
Preference number: 4 (lower is better)
Translates to: EMFITLLRLDTQPCDTNVTHRPR*SWMKSQ
Trigger: TTGTGACTTCATCCAACTGCACCGTGGGCGGTGTGT...CACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp AACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGCTCATTTTCCAATCTCGTTGATCTaGTCGGTGGGGAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: NHVTLMCHRRSLSTLAHFPISLI*SVGKAP
Trigger: CGGGGCCTTCCCCACCGAGCAGATCAACGAGATTGG...AAAATGAGCCAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR GCA 90 bp AAAGTAAACACCATCTCGGACCATGGGTCTGATCCGCTCAGCAAAGCCCTTGAGAGATGTTTATTACACTaGTTCGGCTGGACACGCAAC +
Preference number: 4 (lower is better)
Translates to: KVNTISDHGSDPLSKALERCLLH*FGWTRN
Trigger: GTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCT...CTCAAGGGCTTTGCTGAGCGGATCAGACCCATGGTCCGAGATGGTGTTTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR CCA 90 bp GAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGTTCCTCAAACAAGCCTaGCAAGTGGATGACCACCCC +
Preference number: 4 (lower is better)
Translates to: EMFITLLRLDTQPCDTNVFLKQA*QVDDHP
Trigger: GGGGTGGTCATCCACTTGCCAGGCTTGTTTGAGGAA...CACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp ACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGCTATCGACTGGTGCTGGTaGGCCAGGTTCTTGAATCTG +
Preference number: 4 (lower is better)
Translates to: TRNHVTLMCHRRSLSTLAIDWCW*ARFLNL
Trigger: CAGATTCAAGAACCTGGCCCACCAGCACCAGTCGAT...AGCCAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp ATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGTCATTCCTGCTTTGGTGTTaGTTGTGGCGGCCGAGGAAC +
Preference number: 4 (lower is better)
Translates to: MFITLLRLDTQPCDTNVSFLLWC*LWRPRN
Trigger: GTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA...TGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CCA 90 bp ACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGCTATGGTTTTCCTGCTTTaGTGTTGGTTGTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: TRNHVTLMCHRRSLSTLAMVFLL*CWLWRP
Trigger: CGGCCGCCACAACCAACACCAAAGCAGGAAAACCAT...AGCCAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR TCA 90 bp CAGTGGCCATTGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGATCAGCTCAGTCTGTaGCTAAAACAGCTGGATCAT +
Preference number: 4 (lower is better)
Translates to: QWPLEMFITLLRLDTQPCDQLSL*LKQLDH
Trigger: ATGATCCAGCTGTTTTAGTCACAGACTGAGCTGATC...ACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCAATGGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR GCA 90 bp TGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGACCAACCCATTTGACTaGGACTCCCACGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: WTRNHVTLMCHRRSLSTLTNPFD*DSHVIL
Trigger: GAGAATCACGTGGGAGTCGCAGTCAAATGGGTTGGT...CAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR GCA 90 bp TCAGTGGCCATTGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGAGATGTTTATTACACTaGTTCGGCTGGACACGCAAC +
Preference number: 4 (lower is better)
Translates to: SVAIGDVYYTASAGHATMRCLLH*FGWTRN
Trigger: GTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCT...CATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCAATGGCCACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000556623.1
CDS-3UTR CCA 90 bp TGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGTTACACTGCTTCGGCTaGACACGCAACCATGTGACA +
Preference number: 4 (lower is better)
Translates to: WTRNHVTLMCHRRSLSTLLHCFG*TRNHVT
Trigger: TGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAA...CAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR GCA 90 bp ACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGCTGAGGAACGTGACTGCTaGTGTTTACACAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: TRNHVTLMCHRRSLSTLAEERDC*CLHKSR
Trigger: TCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTC...AGCCAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CCA 90 bp AACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGCTCATTTTCGCCCACGGTGCAGTTaGATGAAGTCACAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: NHVTLMCHRRSLSTLAHFRPRCS*MKSQRG
Trigger: ACCCCTTTGTGACTTCATCCAACTGCACCGTGGGCG...AAAATGAGCCAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp CGTTTCATACTCAACTTCGACCTTCTGAAGCATCTCCTGGTTAGCTGGGAAATATTACACTGCTTCGGCTaGACACGCAACCATGTGACA +
Preference number: 4 (lower is better)
Translates to: RFILNFDLLKHLLVSWEILHCFG*TRNHVT
Trigger: TGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAA...TATTTCCCAGCTAACCAGGAGATGCTTCAGAAGGTCGAAGTTGAGTATGAAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR TCA 90 bp TGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGTCATAAACTCATCAAAATCTaGCAGGAGGTCGCAGATGCG +
Preference number: 4 (lower is better)
Translates to: CLLHCFGWTRNHVTLMCHKLIKI*QEVADA
Trigger: CGCATCTGCGACCTCCTGTCAGATTTTGATGAGTTT...ATGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp CAGTGGCCATTGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTAATCCGTTGACCATGTaGGCATATCTTAGAATCATC +
Preference number: 4 (lower is better)
Translates to: QWPLEMFITLLRLDTQPCNPLTM*AYLRII
Trigger: GATGATTCTAAGATATGCTCACATGGTCAACGGATT...ACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCAATGGCCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR TCA 90 bp TGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGGATCAGCTCAGTCTGTaGCTAAAACAGCTGGATCAT +
Preference number: 4 (lower is better)
Translates to: WRCLLHCFGWTRNHVTLMDQLSL*LKQLDH
Trigger: ATGATCCAGCTGTTTTAGTCACAGACTGAGCTGATC...CATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR GCA 90 bp ATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGTCAGAGGAACGTGACTGCTaGTGTTTACACAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: MFITLLRLDTQPCDTNVSEERDC*CLHKSR
Trigger: TCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTC...TGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR TCA 90 bp TGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGTCATGTCATAGAAGGTCTCTaGGCACTTTGGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: CLLHCFGWTRNHVTLMCHVIEGL*ALWLIL
Trigger: CAAAATGAGCCAAAGTGCTCAGAGACCTTCTATGAC...ATGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR GCA 90 bp TGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGTCATTTCCCTTCTTGGTGGTaGCTATATTCTTCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: CLLHCFGWTRNHVTLMCHFPSWW*LYSSPL
Trigger: AAGAGGGGAAGAATATAGGCACCACCAAGAAGGGAA...ATGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp TGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGAAATCAAACACAAGGTaGGCTCTGTCAGAGATGATG +
Preference number: 4 (lower is better)
Translates to: WTRNHVTLMCHRRSLSTLKSNTR*ALSEMM
Trigger: CATCATCTCTGACAGAGCCCACCTTGTGTTTGATTT...CAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330877.7
ENST00000332972.9
CDS-3UTR CCA 90 bp AACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGCTCATTTTCGATTCCCTTCTTGGTaGTGCCTATATTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: NHVTLMCHRRSLSTLAHFRFPSW*CLYSSP
Trigger: AGGGGAAGAATATAGGCACCACCAAGAAGGGAATCG...AAAATGAGCCAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CCA 90 bp TGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGTCATCATCTCCTGGTTAGCTaGGAAATAGGGAATCCTTTT +
Preference number: 4 (lower is better)
Translates to: CLLHCFGWTRNHVTLMCHHLLVS*EIGNPF
Trigger: AAAAGGATTCCCTATTTCCCAGCTAACCAGGAGATG...ATGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS TCA 90 bp GGCTCCTGCAGTCCTCCTGGGCAGGCAGGTGTGGCCTCCTGCATTTaGCCCGTGGCTCCTCCAAGCCCTCTCCTCTCCCAGCGTCACCCT +
Preference number: 5 (lower is better)
Translates to: GSCSPPGQAGVASCI*PVAPPSPLLSQRHP
Trigger: AGGGTGACGCTGGGAGAGGAGAGGGCTTGGAGGAGCCACGGGTCAAATGCAGGAGGCCACACCTGCCTGCCCAGGAGGACTGCAGGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS CCA 90 bp GCAGTCCTCCTGGGCAGGCAGGTGTGGCCTCCTGCATTTGACCCGTaGCTCCTCCAAGCCCTCTCCTCTCCCAGCGTCACCCTAGTTGGG +
Preference number: 5 (lower is better)
Translates to: AVLLGRQVWPPAFDP*LLQALSSPSVTLVG
Trigger: CCCAACTAGGGTGACGCTGGGAGAGGAGAGGGCTTGGAGGAGCCACGGGTCAAATGCAGGAGGCCACACCTGCCTGCCCAGGAGGACTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS CCA 90 bp CAGCCAGGAGCAGCTCGCCCAGGGCTGCTGAGGAGGAAGCCATTGTaGGGAACAGGGTCAGAACATGACCCTGGACCGAGGTCGAGGGGG +
Preference number: 5 (lower is better)
Translates to: QPGAARPGLLRRKPL*GTGSEHDPGPRSRG
Trigger: CCCCCTCGACCTCGGTCCAGGGTCATGTTCTGACCCTGTTCCCCACAATGGCTTCCTCCTCAGCAGCCCTGGGCGAGCTGCTCCTGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS GCA 90 bp TCCAAGGAGACTTGGTGGCCCTCAGCCCCTGCGTCAAGTGCTGCTTaGCTCTGCAGGTGTCGGGAGTCAGGGACGGTCCCAGTGGGGATG +
Preference number: 5 (lower is better)
Translates to: SKETWWPSAPASSAA*LCRCRESGTVPVGM
Trigger: CATCCCCACTGGGACCGTCCCTGACTCCCGACACCTGCAGAGGCAAGCAGCACTTGACGCAGGGGCTGAGGGCCACCAAGTCTCCTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS GCA 90 bp CTTGTCCAAGGAGACTTGGTGGCCCTCAGCCCCTGCGTCAAGTGCTaGTTGCCTCTGCAGGTGTCGGGAGTCAGGGACGGTCCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: LVQGDLVALSPCVKC*LPLQVSGVRDGPSG
Trigger: CCCACTGGGACCGTCCCTGACTCCCGACACCTGCAGAGGCAAGCAGCACTTGACGCAGGGGCTGAGGGCCACCAAGTCTCCTTGGACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS GCA 90 bp GAGCCGACCGCATCCACTAACTCCTGTGTGCCTCCCGTGGCTCCCTaGAGGTGGGCCTTTTCCTCAAGGCAGCTGAAGGTCCCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: EPTASTNSCVPPVAP*RWAFSSRQLKVPQG
Trigger: ACCCTGGGGGACCTTCAGCTGCCTTGAGGAAAAGGCCCACCTGCAGGGAGCCACGGGAGGCACACAGGAGTTAGTGGATGCGGTCGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS CCA 90 bp GGTGTTAAGGATCCGGCTCCTGCAGTCCTCCTGGGCAGGCAGGTGTaGCCTCCTGCATTTGACCCGTGGCTCCTCCAAGCCCTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: GVKDPAPAVLLGRQV*PPAFDPWLLQALSS
Trigger: AGAGGAGAGGGCTTGGAGGAGCCACGGGTCAAATGCAGGAGGCCACACCTGCCTGCCCAGGAGGACTGCAGGAGCCGGATCCTTAACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS TCA 90 bp AGTGGGGCCCACAGACCTCCTATCACCAGGGAAGCGGATATTTGGTaGCACGGCCACCCCCATCCAGGGCCTCCTTGCCTAGGGACTCAG +
Preference number: 5 (lower is better)
Translates to: SGAHRPPITREADIW*HGHPHPGPPCLGTQ
Trigger: CTGAGTCCCTAGGCAAGGAGGCCCTGGATGGGGGTGGCCGTGTCACCAAATATCCGCTTCCCTGGTGATAGGAGGTCTGTGGGCCCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555674.1
ENST00000557271.5
CDS GCA 90 bp AACCTTGTCCAAGGAGACTTGGTGGCCCTCAGCCCCTGCGTCAAGTaGTGCTTGCCTCTGCAGGTGTCGGGAGTCAGGGACGGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: NLVQGDLVALSPCVK*CLPLQVSGVRDGPS
Trigger: ACTGGGACCGTCCCTGACTCCCGACACCTGCAGAGGCAAGCAGCACTTGACGCAGGGGCTGAGGGCCACCAAGTCTCCTTGGACAAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS GCA 90 bp CCTGGGGTGGGAGTTTGTGCTCCTACGGCTGGCTCCAACACACCCTaGACAGGCCTCCATACCGCTAACCTCTGGGCCGTGCTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: PGVGVCAPTAGSNTP*TGLHTANLWAVLCG
Trigger: TCCACAAAGCACGGCCCAGAGGTTAGCGGTATGGAGGCCTGTGCAGGGTGTGTTGGAGCCAGCCGTAGGAGCACAAACTCCCACCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS GCA 90 bp GGATGCCCTCATCCTTCACGGCATCAGCCCTGGGGTGGGAGTTTGTaGTCCTACGGCTGGCTCCAACACACCCTGCACAGGCCTCCATAC +
Preference number: 5 (lower is better)
Translates to: GCPHPSRHQPWGGSL*SYGWLQHTLHRPPY
Trigger: GTATGGAGGCCTGTGCAGGGTGTGTTGGAGCCAGCCGTAGGAGCACAAACTCCCACCCCAGGGCTGATGCCGTGAAGGATGAGGGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS GCA 90 bp GCAGCCTCTCAAAGGTCAAGGGTCAGGAGGGTCAGGGACACCGCCTaGAAGGACACACATGGCTCCTGTAGCCAAGTGGCCCTGTGTGGC +
Preference number: 5 (lower is better)
Translates to: AASQRSRVRRVRDTA*KDTHGSCSQVALCG
Trigger: GCCACACAGGGCCACTTGGCTACAGGAGCCATGTGTGTCCTTGCAGGCGGTGTCCCTGACCCTCCTGACCCTTGACCTTTGAGAGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS CCA 90 bp ACAAGTGCCGGGATGCCCTCATCCTTCACGGCATCAGCCCTGGGGTaGGAGTTTGTGCTCCTACGGCTGGCTCCAACACACCCTGCACAG +
Preference number: 5 (lower is better)
Translates to: TSAGMPSSFTASALG*EFVLLRLAPTHPAQ
Trigger: CTGTGCAGGGTGTGTTGGAGCCAGCCGTAGGAGCACAAACTCCCACCCCAGGGCTGATGCCGTGAAGGATGAGGGCATCCCGGCACTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CCA 90 bp CTCTCACAAGTGCCGGGATGCCCTCATCCTTCACGGCATCAGCCCTaGGGTGGGAGTTTGTGCTCCTACGGCTGGCTCCAACACACCCTG +
Preference number: 5 (lower is better)
Translates to: LSQVPGCPHPSRHQP*GGSLCSYGWLQHTL
Trigger: CAGGGTGTGTTGGAGCCAGCCGTAGGAGCACAAACTCCCACCCCAGGGCTGATGCCGTGAAGGATGAGGGCATCCCGGCACTTGTGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS-3UTR CAA 90 bp TGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTTCGAGGAGGGCGGCGTaGGCACCCTCCACCAGGATC +
Preference number: 5 (lower is better)
Translates to: WLWRPRNVTAAVYTSPDASRRAA*APSTRI
Trigger: GATCCTGGTGGAGGGTGCCAACGCCGCCCTCCTCGA...AGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp CGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCATCGAGGAGGGCGGCGTaGGCACCCTCCACCAGGATC +
Preference number: 5 (lower is better)
Translates to: RDCCCLHKSRRCQGLLGSSRRAA*APSTRI
Trigger: GATCCTGGTGGAGGGTGCCAACGCCGCCCTCCTCGA...TGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp CTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTCGAGGAGGGCGGCGTaGGCACCCTCCACCAGGATC +
Preference number: 5 (lower is better)
Translates to: LLFTQVQTLPGPVGISSVSRRAA*APSTRI
Trigger: GATCCTGGTGGAGGGTGCCAACGCCGCCCTCCTCGA...GACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS GCA 90 bp CTGGGACCCTGGACCACCATGAGGAGAGCTTGCAGTCCTCACAAGTaGAGCCTCTCAAAGGTCAAGGGTCAGGAGGGTCAGGGACACCGC +
Preference number: 5 (lower is better)
Translates to: LGPWTTMRRACSPHK*SLSKVKGQEGQGHR
Trigger: GCGGTGTCCCTGACCCTCCTGACCCTTGACCTTTGAGAGGCTGCACTTGTGAGGACTGCAAGCTCTCCTCATGGTGGTCCAGGGTCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS GCA 90 bp GGACAGTTTCATCCCGAAACCATCCGCCGCCACACCCCTGCCACCTaGCCTGTCTGTGGGAAAATCATCTCCCGCCAAACTGGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: GQFHPETIRRHTPAT*PVCGKIISRQTGPW
Trigger: CCAGGGACCAGTTTGGCGGGAGATGATTTTCCCACAGACAGGGCAGGTGGCAGGGGTGTGGCGGCGGATGGTTTCGGGATGAAACTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555884.6
CDS CCA 90 bp TCACCCAGTACGTCCAGGATGTCCAGCTTCGTCAGGGCCAGCCTGTaGAAAGCCAAGGGGCCGGGCAAACCCAAGAAGTGGTCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: SPSTSRMSSFVRASL*KAKGPGKPKKWSAV
Trigger: CACTGCTGACCACTTCTTGGGTTTGCCCGGCCCCTTGGCTTTCCACAGGCTGGCCCTGACGAAGCTGGACATCCTGGACGTACTGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555884.6
ENST00000557271.5
CDS CCA 90 bp TCCTGTAGCCAAGTGGCCCTGTGTGGCCTACAAAGATCTGCTGAGTaGAGACCAGCCAGGAGCAGCTCGCCCAGGGCTGCTGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: SCSQVALCGLQRSAE*RPARSSSPRAAEEE
Trigger: TTCCTCCTCAGCAGCCCTGGGCGAGCTGCTCCTGGCTGGTCTCCACTCAGCAGATCTTTGTAGGCCACACAGGGCCACTTGGCTACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS CCA 90 bp TTGAGCCTTGGAGCCAGGCAGTGTTTGCGTGTCCCCCTGGGACCCTaGACCACCATGAGGAGAGCTTGCAGTCCTCACAAGTGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LSLGARQCLRVPLGP*TTMRRACSPHKCSL
Trigger: GAGGCTGCACTTGTGAGGACTGCAAGCTCTCCTCATGGTGGTCCAGGGTCCCAGGGGGACACGCAAACACTGCCTGGCTCCAAGGCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS-3UTR CAA 90 bp CCTGTGGTCACTCCCCACTCGTGGCCGCGGGTCTGCAGCAGGCCTCCAATCTCGCTTTGGAAGAGTAGGTaGGTCCGATTCCCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: PVVTPHSWPRVCSRPPISLWKSR*VRFPSW
Trigger: CCAAGAAGGGAATCGGACCAACCTACTCTTCCAAAG...CGAGATTGGAGGCCTGCTGCAGACCCGCGGCCACGAGTGGGGAGTGACCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR CAA 90 bp TGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGCTGCTTTGGTGTTGGTaGTGGCGGCCGAGGAACGTG +
Preference number: 5 (lower is better)
Translates to: WRPRNVTAAVYTSPDAARLLWCW*WRPRNV
Trigger: CACGTTCCTCGGCCGCCACAACCAACACCAAAGCAG...CCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CAA 90 bp CTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTCCTCTGCCCACCTCCTaGCCTCTGGGTTGCCACCCC +
Preference number: 5 (lower is better)
Translates to: LFTQVQTLPGPVGISSVCPLPTS*PLGCHP
Trigger: GGGGTGGCAACCCAGAGGCAAGGAGGTGGGCAGAGG...ACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS GCA 90 bp ATCAGTGGAAACCTTGTCCAAGGAGACTTGGTGGCCCTCAGCCCCTaGGTCAAGTGCTGCTTGCCTCTGCAGGTGTCGGGAGTCAGGGAC +
Preference number: 5 (lower is better)
Translates to: ISGNLVQGDLVALSP*VKCCLPLQVSGVRD
Trigger: GTCCCTGACTCCCGACACCTGCAGAGGCAAGCAGCACTTGACGCAGGGGCTGAGGGCCACCAAGTCTCCTTGGACAAGGTTTCCACTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS GCA 90 bp GAGCTTTACATCTTCCAGAGCCGACCGCATCCACTAACTCCTGTGTaGCTCCCGTGGCTCCCTGCAGGTGGGCCTTTTCCTCAAGGCAGC +
Preference number: 5 (lower is better)
Translates to: ELYIFQSRPHPLTPV*LPWLPAGGPFPQGS
Trigger: GCTGCCTTGAGGAAAAGGCCCACCTGCAGGGAGCCACGGGAGGCACACAGGAGTTAGTGGATGCGGTCGGCTCTGGAAGATGTAAAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS GCA 90 bp CACCCCAAGAGCATCAACTCCCAGAGGGCAGGGATCCCGGCCCTGTaGAGGACTCTGTGGCTCCTGGTAGAAGACAACCACCCTTACAGA +
Preference number: 5 (lower is better)
Translates to: HPKSINSQRAGIPAL*RTLWLLVEDNHPYR
Trigger: TCTGTAAGGGTGGTTGTCTTCTACCAGGAGCCACAGAGTCCTGCACAGGGCCGGGATCCCTGCCCTCTGGGAGTTGATGCTCTTGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS GCA 90 bp AGAGGTGGGACAGTTTCATCCCGAAACCATCCGCCGCCACACCCCTaGCACCTGCCCTGTCTGTGGGAAAATCATCTCCCGCCAAACTGG +
Preference number: 5 (lower is better)
Translates to: RGGTVSSRNHPPPHP*HLPCLWENHLPPNW
Trigger: CCAGTTTGGCGGGAGATGATTTTCCCACAGACAGGGCAGGTGGCAGGGGTGTGGCGGCGGATGGTTTCGGGATGAAACTGTCCCACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555884.6
CDS CCA 90 bp GTCCCTGGGCTGTGGACCAGTACTGGTTGGTGGCCTGTTTGGAATTaGGCTGCAGAGCAGATGAGTGGCGGGCAAGCTAGCATTACGGCC +
Preference number: 5 (lower is better)
Translates to: VPGLWTSTGWWPVWN*AAEQMSGGQASITA
Trigger: GGCCGTAATGCTAGCTTGCCCGCCACTCATCTGCTCTGCAGCCCAATTCCAAACAGGCCACCAACCAGTACTGGTCCACAGCCCAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555884.6
CDS-3UTR CAA 90 bp TTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCCGCTGCCAGGGCCTGTaGGGATCAGCTCAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: LVVAAEERDCCCLHKSRRRCQGL*GSAQSV
Trigger: CACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCG...GCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CAA 90 bp GGTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTCGCTGCCAGGGCCTGTaGGGATCAGCTCAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: GFPALVLVVAAEERDCCCRCQGL*GSAQSV
Trigger: CACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCG...ACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CAA 90 bp CTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCCGCTGCCAGGGCCTGTaGGGATCAGCTCAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: LLFTQVQTLPGPVGISSVRCQGL*GSAQSV
Trigger: CACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCG...GACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS GCA 90 bp TGTTTGCGTGTCCCCCTGGGACCCTGGACCACCATGAGGAGAGCTTaGAGTCCTCACAAGTGCAGCCTCTCAAAGGTCAAGGGTCAGGAG +
Preference number: 5 (lower is better)
Translates to: CLRVPLGPWTTMRRA*SPHKCSLSKVKGQE
Trigger: CTCCTGACCCTTGACCTTTGAGAGGCTGCACTTGTGAGGACTGCAAGCTCTCCTCATGGTGGTCCAGGGTCCCAGGGGGACACGCAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS CCA 90 bp GTGGAAGGGTCGAGATCAGTGGAAACCTTGTCCAAGGAGACTTGGTaGCCCTCAGCCCCTGCGTCAAGTGCTGCTTGCCTCTGCAGGTGT +
Preference number: 5 (lower is better)
Translates to: VEGSRSVETLSKETW*PSAPASSAACLCRC
Trigger: ACACCTGCAGAGGCAAGCAGCACTTGACGCAGGGGCTGAGGGCCACCAAGTCTCCTTGGACAAGGTTTCCACTGATCTCGACCCTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CCA 90 bp GCTGGCTCCAACACACCCTGCACAGGCCTCCATACCGCTAACCTCTaGGCCGTGCTTTGTGGAAGGGTCGAGATCAGTGGAAACCTTGTC +
Preference number: 5 (lower is better)
Translates to: AGSNTPCTGLHTANL*AVLCGRVEISGNLV
Trigger: GACAAGGTTTCCACTGATCTCGACCCTTCCACAAAGCACGGCCCAGAGGTTAGCGGTATGGAGGCCTGTGCAGGGTGTGTTGGAGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CCA 90 bp TCAGGGACACCGCCTGCAAGGACACACATGGCTCCTGTAGCCAAGTaGCCCTGTGTGGCCTACAAAGATCTGCTGAGTGGAGACCAGCCA +
Preference number: 5 (lower is better)
Translates to: SGTPPARTHMAPVAK*PCVAYKDLLSGDQP
Trigger: TGGCTGGTCTCCACTCAGCAGATCTTTGTAGGCCACACAGGGCCACTTGGCTACAGGAGCCATGTGTGTCCTTGCAGGCGGTGTCCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS CCA 90 bp GAAGATGCTGGAATACGGGTTCTCGCTGCAAGTGTGTTTGAGCCTTaGAGCCAGGCAGTGTTTGCGTGTCCCCCTGGGACCCTGGACCAC +
Preference number: 5 (lower is better)
Translates to: EDAGIRVLAASVFEP*SQAVFACPPGTLDH
Trigger: GTGGTCCAGGGTCCCAGGGGGACACGCAAACACTGCCTGGCTCCAAGGCTCAAACACACTTGCAGCGAGAACCCGTATTCCAGCATCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS CCA 90 bp TCCCCAGTCCCTGGGCTGTGGACCAGTACTGGTTGGTGGCCTGTTTaGAATTGGGCTGCAGAGCAGATGAGTGGCGGGCAAGCTAGCATT +
Preference number: 5 (lower is better)
Translates to: SPVPGLWTSTGWWPV*NWAAEQMSGGQASI
Trigger: AATGCTAGCTTGCCCGCCACTCATCTGCTCTGCAGCCCAATTCCAAACAGGCCACCAACCAGTACTGGTCCACAGCCCAGGGACTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555884.6
CDS-3UTR CAA 90 bp GCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGGACACGGCCTTGGTGTaGATGATGCCGCTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: ALVLVVAAEERDCCCLHKDTALV*MMPLGS
Trigger: GCTGCCCAGCGGCATCATCAACACCAAGGCCGTGTC...CTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp AGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGACTAAAACAGCTGGAGACACGGCCTTGGTGTaGATGATGCCGCTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: RRCQGLLGSAQSVTKTAGDTALV*MMPLGS
Trigger: GCTGCCCAGCGGCATCATCAACACCAAGGCCGTGTC...TCCAGCTGTTTTAGTCACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR CAA 90 bp CTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCCCGCCCACGGTGCAGTaGGATGAAGTCACAAAGGGG +
Preference number: 5 (lower is better)
Translates to: LLFTQVQTLPGPVGISSVPPTVQ*DEVTKG
Trigger: CCCCTTTGTGACTTCATCCAACTGCACCGTGGGCGG...GACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp CCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACCTGCTTTGGTGTTGGTaGTGGCGGCCGAGGAACGTG +
Preference number: 5 (lower is better)
Translates to: PALVLVVAAEERDCCCLHLLWCW*WRPRNV
Trigger: CACGTTCCTCGGCCGCCACAACCAACACCAAAGCAG...GTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CAA 90 bp CTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGTAACTGGAGACTCCTaGGAGGCAGCCAGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: LFTQVQTLPGPVGISSVCVTGDS*EAARGG
Trigger: CCCTCCCCTGGCTGCCTCCAAGGAGTCTCCAGTTAC...ACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS GCA 90 bp CCAACACACCCTGCACAGGCCTCCATACCGCTAACCTCTGGGCCGTaGTTTGTGGAAGGGTCGAGATCAGTGGAAACCTTGTCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: PTHPAQASIPLTSGP*FVEGSRSVETLSKE
Trigger: CTCCTTGGACAAGGTTTCCACTGATCTCGACCCTTCCACAAAGCACGGCCCAGAGGTTAGCGGTATGGAGGCCTGTGCAGGGTGTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CCA 90 bp TTTGTGGAAGGGTCGAGATCAGTGGAAACCTTGTCCAAGGAGACTTaGTGGCCCTCAGCCCCTGCGTCAAGTGCTGCTTGCCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: FVEGSRSVETLSKET*WPSAPASSAACLCR
Trigger: CCTGCAGAGGCAAGCAGCACTTGACGCAGGGGCTGAGGGCCACCAAGTCTCCTTGGACAAGGTTTCCACTGATCTCGACCCTTCCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CCA 90 bp ATCAACTCCCAGAGGGCAGGGATCCCGGCCCTGTGCAGGACTCTGTaGCTCCTGGTAGAAGACAACCACCCTTACAGATGGAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: INSQRAGIPALCRTL*LLVEDNHPYRWKML
Trigger: CAGCATCTTCCATCTGTAAGGGTGGTTGTCTTCTACCAGGAGCCACAGAGTCCTGCACAGGGCCGGGATCCCTGCCCTCTGGGAGTTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS-3UTR CAA 90 bp CCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTCGCTCAGCAAAGCCCTaGAGCCTTTTGAGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: PRNVTAAVYTSPDAARACRSAKP*SLLSWP
Trigger: AGGCCAACTCAAAAGGCTCAAGGGCTTTGCTGAGCG...ACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp CCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAGGCCTCCAATCTCGTaGATCTGCTCGGTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: PALVLVVAAEERDCCCLHRPPIS*ICSVGK
Trigger: CTTCCCCACCGAGCAGATCAACGAGATTGGAGGCCT...GTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp CTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAAGGCCTCCAATCTCGTaGATCTGCTCGGTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: LLLFTQVQTLPGPVGISSRPPIS*ICSVGK
Trigger: CTTCCCCACCGAGCAGATCAACGAGATTGGAGGCCT...TGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp TTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACGCTGCCAGGGCCTGTaGGGATCAGCTCAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: FPALVLVVAAEERDCCCLRCQGL*GSAQSV
Trigger: CACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCG...TAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CAA 90 bp GATTCTCCACAAAGCGGATGTAGTTCTGGGCCTGTGGGGGCAGGTCCTCCCACCAATGGTTTTCCTGCTTaGGTGTTGGTTGTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: DSPQSGCSSGPVGAGPPTNGFPA*VLVVAA
Trigger: GGCCGCCACAACCAACACCAAAGCAGGAAAACCATT...GGTGGGAGGACCTGCCCCCACAGGCCCAGAACTACATCCGCTTTGTGGAGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR CAA 90 bp CAGTGGCCATTGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTCCTCTGCCCACCTCCTaGCCTCTGGGTTGCCACCCC +
Preference number: 5 (lower is better)
Translates to: QWPLEMFITLLRLDTQPCPLPTS*PLGCHP
Trigger: GGGGTGGCAACCCAGAGGCAAGGAGGTGGGCAGAGG...ACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCAATGGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp TTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACCATCCAGGGCCTCCTaGCCTAGGGACTCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: FPALVLVVAAEERDCCCLPSRAS*PRDSAA
Trigger: TGCAGCTGAGTCCCTAGGCAAGGAGGCCCTGGATGG...TAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555674.1
CDS TCA 90 bp ACAGATGGAAGATGCTGGAATACGGGTTCTCGCTGCAAGTGTGTTTaGGCCTTGGAGCCAGGCAGTGTTTGCGTGTCCCCCTGGGACCCT +
Preference number: 5 (lower is better)
Translates to: TDGRCWNTGSRCKCV*ALEPGSVCVSPWDP
Trigger: AGGGTCCCAGGGGGACACGCAAACACTGCCTGGCTCCAAGGCTCAAACACACTTGCAGCGAGAACCCGTATTCCAGCATCTTCCATCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS GCA 90 bp TCCGCTCTCCACATGAAGCATTTTAACCTCTCACAAGTGCCGGGATaGCCTCATCCTTCACGGCATCAGCCCTGGGGTGGGAGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: SALHMKHFNLSQVPG*PHPSRHQPWGGSLC
Trigger: GCACAAACTCCCACCCCAGGGCTGATGCCGTGAAGGATGAGGGCATCCCGGCACTTGTGAGAGGTTAAAATGCTTCATGTGGAGAGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS GCA 90 bp GAGGCAAAAGCCATGATGGAGGCTGGTCACTGGAGACAAGCTGCTTaGCCTGTGTCCTGTGAACGTGGGAACTCACCCCTCTCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: EAKAMMEAGHWRQAA*PVSCERGNSPLSEK
Trigger: CTTCTCAGAGAGGGGTGAGTTCCCACGTTCACAGGACACAGGGCAAGCAGCTTGTCTCCAGTGACCAGCCTCCATCATGGCTTTTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS CCA 90 bp CCTTGCCTAGGGACTCAGCTGCAAGGAAGGCAGCAAGTGGGCACGTaGCCCAGTTTGATTTTCTCAGTGTTGGGTGGTAAGCAGGGGACA +
Preference number: 5 (lower is better)
Translates to: PCLGTQLQGRQQVGT*PSLIFSVLGGKQGT
Trigger: TGTCCCCTGCTTACCACCCAACACTGAGAAAATCAAACTGGGCCACGTGCCCACTTGCTGCCTTCCTTGCAGCTGAGTCCCTAGGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS-3UTR CAA 90 bp CCAGGCCCGTGCACACACCGCCCACGGTGCAGTTGGATGAAGTCACAAAGGGGTAAGCCCTTGAGCCTTTaGAGTTGGCCTTCAATGTCT +
Preference number: 5 (lower is better)
Translates to: PGPCTHRPRCSWMKSQRGKPLSL*SWPSMS
Trigger: AGACATTGAAGGCCAACTCAAAAGGCTCAAGGGCTT...ACCCCTTTGTGACTTCATCCAACTGCACCGTGGGCGGTGTGTGCACGGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR CAA 90 bp TTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCCGCTCAGCAAAGCCCTaGAGCCTTTTGAGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: LVVAAEERDCCCLHKSRRRSAKP*SLLSWP
Trigger: AGGCCAACTCAAAAGGCTCAAGGGCTTTGCTGAGCG...GCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp GAGACACCGACTTTAACCTCACCCAGTACGTCCAGGATGTCCAGCTTCGTCAGGAGGCCTCCAATCTCGTaGATCTGCTCGGTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: ETPTLTSPSTSRMSSFVRRPPIS*ICSVGK
Trigger: CTTCCCCACCGAGCAGATCAACGAGATTGGAGGCCT...CCTGACGAAGCTGGACATCCTGGACGTACTGGGTGAGGTTAAAGTCGGTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR CAA 90 bp GACTTTAACCTCACCCAGTACGTCCAGGATGTCCAGCTTCGTCAGGGCCAGCGCGGATCATCGACTCTCTaGACTTGCCAACACCAACCC +
Preference number: 5 (lower is better)
Translates to: DFNLTQYVQDVQLRQGQRGSSTL*TCQHQP
Trigger: GGGTTGGTGTTGGCAAGTCAAGAGAGTCGATGATCC...GCGCTGGCCCTGACGAAGCTGGACATCCTGGACGTACTGGGTGAGGTTAAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR CAA 90 bp TTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACTGCTTTGGTGTTGGTaGTGGCGGCCGAGGAACGTG +
Preference number: 5 (lower is better)
Translates to: FPALVLVVAAEERDCCCLLLWCW*WRPRNV
Trigger: CACGTTCCTCGGCCGCCACAACCAACACCAAAGCAG...TAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CAA 90 bp GGTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTTCCTGCTTTGGTGTaGGTTGTGGCGGCCGAGGAA +
Preference number: 5 (lower is better)
Translates to: GFPALVLVVAAEERDCCCFPALV*VVAAEE
Trigger: TTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAA...ACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CAA 90 bp GCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTTTTCCTGCTTTGGTGTaGGTTGTGGCGGCCGAGGAA +
Preference number: 5 (lower is better)
Translates to: AAVYTSPDAARACWDQLSFPALV*VVAAEE
Trigger: TTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAA...ACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CAA 90 bp TTCGGCTGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCCTCCTTGCCTCTGGGTaGCCACCCCACAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: FGWTRNHVTLMCHRRSLSLLASG*PPHSSS
Trigger: GGAGGAGCTGTGGGGTGGCAACCCAGAGGCAAGGAG...GCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS TCA 90 bp GGGATGGCAGCATGGGTTGCTTACGCAGTGAATCCGTTGACCATGTaGGCATATCTTAGAATCATCAGGTCGAGCCAGCCGCAGCGCCTC +
Preference number: 5 (lower is better)
Translates to: GMAAWVAYAVNPLTM*AYLRIIRSSQPQRL
Trigger: GAGGCGCTGCGGCTGGCTCGACCTGATGATTCTAAGATATGCTCACATGGTCAACGGATTCACTGCGTAAGCAACCCATGCTGCCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CCA 90 bp AATCTGACAGGAGGTCGCAGATGCGGAGGCCTGTCCGGGCAGCTTTaGAAGAGTAGGTTGGTCCGATTCCCTTCTTGGTGGTGCCTATAT +
Preference number: 5 (lower is better)
Translates to: NLTGGRRCGGLSGQL*KSRLVRFPSWWCLY
Trigger: ATATAGGCACCACCAAGAAGGGAATCGGACCAACCTACTCTTCCAAAGCTGCCCGGACAGGCCTCCGCATCTGCGACCTCCTGTCAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555486.5
ENST00000557582.5
CDS-3UTR CAA 90 bp TTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACATGAAGGACACGGCCTaGGTGTTGATGATGCCGCTG +
Preference number: 5 (lower is better)
Translates to: FLLWCWLWRPRNVTAAVYMKDTA*VLMMPL
Trigger: CAGCGGCATCATCAACACCAAGGCCGTGTCCTTCAT...GTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp GTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTCGCTCAGCAAAGCCCTaGAGCCTTTTGAGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: VFLLWCWLWRPRNVTAAVRSAKP*SLLSWP
Trigger: AGGCCAACTCAAAAGGCTCAAGGGCTTTGCTGAGCG...AACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp AAAGTAAACACCATCTCGGACCATGGGTCTGATCCGCTCAGCAAAGCCCTTGAGCCGCCCACGGTGCAGTaGGATGAAGTCACAAAGGGG +
Preference number: 5 (lower is better)
Translates to: KVNTISDHGSDPLSKALEPPTVQ*DEVTKG
Trigger: CCCCTTTGTGACTTCATCCAACTGCACCGTGGGCGG...CTCAAGGGCTTTGCTGAGCGGATCAGACCCATGGTCCGAGATGGTGTTTACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR CAA 90 bp CGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGGATCATCGACTCTCTaGACTTGCCAACACCAACCC +
Preference number: 5 (lower is better)
Translates to: RDCCCLHKSRRCQGLLGSGSSTL*TCQHQP
Trigger: GGGTTGGTGTTGGCAAGTCAAGAGAGTCGATGATCC...TGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CAA 90 bp TTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACTTTCCTGCTTTGGTGTaGGTTGTGGCGGCCGAGGAA +
Preference number: 5 (lower is better)
Translates to: FLLWCWLWRPRNVTAAVYFPALV*VVAAEE
Trigger: TTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAA...GTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CAA 90 bp CTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCAATGGTTTTCCTGCTTaGGTGTTGGTTGTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: LLFTQVQTLPGPVGISSVNGFPA*VLVVAA
Trigger: GGCCGCCACAACCAACACCAAAGCAGGAAAACCATT...GACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CAA 90 bp CGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGGCACGTGGCCCAGTTaGATTTTCTCAGTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: RDCCCLHKSRRCQGLLGSGTWPS*IFSVLG
Trigger: ACCCAACACTGAGAAAATCAAACTGGGCCACGTGCC...TGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555674.1
ENST00000556623.1
CDS TCA 90 bp AGCAGTGGGGCTCAGACACTACACGCCTTCCAGACCAGAGGGACATaGCACATATGTGCTACCCACTCTGCTAGAACCTCCACTGTGACA +
Preference number: 5 (lower is better)
Translates to: SSGAQTLHAFQTRGT*HICATHSARTSTVT
Trigger: TGTCACAGTGGAGGTTCTAGCAGAGTGGGTAGCACATATGTGTCATGTCCCTCTGGTCTGGAAGGCGTGTAGTGTCTGAGCCCCACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS-3UTR CAA 90 bp GCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTGGTCCGATTCCCTTCTaGGTGGTGCCTATATTCTTC +
Preference number: 5 (lower is better)
Translates to: AAVYTSPDAARACWDQLSGPIPF*VVPIFF
Trigger: GAAGAATATAGGCACCACCAAGAAGGGAATCGGACC...ACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp TGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTTGGTGGGCCAGGTTCTaGAATCTGGAGGAAAACTCA +
Preference number: 5 (lower is better)
Translates to: WLWRPRNVTAAVYTSPDAWWARF*NLEENS
Trigger: TGAGTTTTCCTCCAGATTCAAGAACCTGGCCCACCA...AGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp TTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCGGATCATCGACTCTCTaGACTTGCCAACACCAACCC +
Preference number: 5 (lower is better)
Translates to: LVLVVAAEERDCCCLHKSGSSTL*TCQHQP
Trigger: GGGTTGGTGTTGGCAAGTCAAGAGAGTCGATGATCC...GGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CAA 90 bp TTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAATGGTTTTCCTGCTTaGGTGTTGGTTGTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: LVLVVAAEERDCCCLHKSNGFPA*VLVVAA
Trigger: GGCCGCCACAACCAACACCAAAGCAGGAAAACCATT...GGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CAA 90 bp TTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACAATGGTTTTCCTGCTTaGGTGTTGGTTGTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: FLLWCWLWRPRNVTAAVYNGFPA*VLVVAA
Trigger: GGCCGCCACAACCAACACCAAAGCAGGAAAACCATT...GTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CAA 90 bp TGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGCTCCTTGCCTCTGGGTaGCCACCCCACAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: WRCLLHCFGWTRNHVTLMLLASG*PPHSSS
Trigger: GGAGGAGCTGTGGGGTGGCAACCCAGAGGCAAGGAG...CATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp TCAGTGGCCATTGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGTGGCCTCCTGCATTaGACCCGTGGCTCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: SVAIGDVYYTASAGHATMCGLLH*TRGSSK
Trigger: CTTGGAGGAGCCACGGGTCAAATGCAGGAGGCCACA...CATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCAATGGCCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332972.9
CDS-3UTR CAA 90 bp CCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTCCAACACCAACCCATTaGACTGAGAGAGCAGAAAAG +
Preference number: 5 (lower is better)
Translates to: PRNVTAAVYTSPDAARACPTPTH*TERAEK
Trigger: CTTTTCTGCTCTCTCAGTCAAATGGGTTGGTGTTGG...ACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555674.1
CDS CCA 90 bp CGTTTCATACTCAACTTCGACCTTCTGAAGCATCTCCTGGTTAGCTaGGGGAAGCACACAGGAGATGAGTGGGGCCCACAGACCTCCTAT +
Preference number: 5 (lower is better)
Translates to: RFILNFDLLKHLLVS*GKHTGDEWGPQTSY
Trigger: ATAGGAGGTCTGTGGGCCCCACTCATCTCCTGTGTGCTTCCCCCAGCTAACCAGGAGATGCTTCAGAAGGTCGAAGTTGAGTATGAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555674.1
ENST00000557271.5
CDS-3UTR CAA 90 bp TGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGACACGGCCTTGGTGTaGATGATGCCGCTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: WTRNHVTLMCHRRSLSTLDTALV*MMPLGS
Trigger: GCTGCCCAGCGGCATCATCAACACCAAGGCCGTGTC...CAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp TGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGGGTCCGATTCCCTTCTaGGTGGTGCCTATATTCTTC +
Preference number: 5 (lower is better)
Translates to: CLHKSRRCQGLLGSAQSVGPIPF*VVPIFF
Trigger: GAAGAATATAGGCACCACCAAGAAGGGAATCGGACC...CACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp CTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGGTCCGATTCCCTTCTaGGTGGTGCCTATATTCTTC +
Preference number: 5 (lower is better)
Translates to: LFTQVQTLPGPVGISSVCGPIPF*VVPIFF
Trigger: GAAGAATATAGGCACCACCAAGAAGGGAATCGGACC...ACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp CTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTCTTTGGAAGAGTAGGTaGGTCCGATTCCCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: LFTQVQTLPGPVGISSVCLWKSR*VRFPSW
Trigger: CCAAGAAGGGAATCGGACCAACCTACTCTTCCAAAG...ACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp TGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTGTGTGGTGGGCCAGGTTCTaGAATCTGGAGGAAAACTCA +
Preference number: 5 (lower is better)
Translates to: CLHKSRRCQGLLGSAQSVWWARF*NLEENS
Trigger: TGAGTTTTCCTCCAGATTCAAGAACCTGGCCCACCA...CACAGACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp TGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGAAGCCCTTGAGCCTTTaGAGTTGGCCTTCAATGTCT +
Preference number: 5 (lower is better)
Translates to: CCCLHKSRRCQGLLGSAQKPLSL*SWPSMS
Trigger: AGACATTGAAGGCCAACTCAAAAGGCTCAAGGGCTT...CTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp GGTTTTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTATCGACTCTCTTGACTaGCCAACACCAACCCATTTG +
Preference number: 5 (lower is better)
Translates to: GFPALVLVVAAEERDCCCIDSLD*PTPTHL
Trigger: CAAATGGGTTGGTGTTGGCAAGTCAAGAGAGTCGAT...ACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CAA 90 bp CTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAATCGACTCTCTTGACTaGCCAACACCAACCCATTTG +
Preference number: 5 (lower is better)
Translates to: LLLFTQVQTLPGPVGISSIDSLD*PTPTHL
Trigger: CAAATGGGTTGGTGTTGGCAAGTCAAGAGAGTCGAT...TGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CAA 90 bp CGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAATCGACTCTCTTGACTaGCCAACACCAACCCATTTG +
Preference number: 5 (lower is better)
Translates to: RDCCCLHKSRRCQGLLGSIDSLD*PTPTHL
Trigger: CAAATGGGTTGGTGTTGGCAAGTCAAGAGAGTCGAT...TGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CAA 90 bp GACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTATCGACTCTCTTGACTaGCCAACACCAACCCATTTG +
Preference number: 5 (lower is better)
Translates to: DCCCLHKSRRCQGLLGSAIDSLD*PTPTHL
Trigger: CAAATGGGTTGGTGTTGGCAAGTCAAGAGAGTCGAT...AGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555674.1
ENST00000556623.1
CDS-3UTR CAA 90 bp ACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGCTGTAACTGGAGACTCCTaGGAGGCAGCCAGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: TRNHVTLMCHRRSLSTLAVTGDS*EAARGG
Trigger: CCCTCCCCTGGCTGCCTCCAAGGAGTCTCCAGTTAC...AGCCAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS TCA 90 bp TCTGCTTTCCACCCAGGCAGCGTTTCATACTCAACTTCGACCTTCTaGAGCATCTCCTGGTTAGCTGGGGGAAGCACACAGGAGATGAGT +
Preference number: 5 (lower is better)
Translates to: SAFHPGSVSYSTSTF*SISWLAGGSTQEMS
Trigger: ACTCATCTCCTGTGTGCTTCCCCCAGCTAACCAGGAGATGCTTCAGAAGGTCGAAGTTGAGTATGAAACGCTGCCTGGGTGGAAAGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555674.1
ENST00000557271.5
CDS GCA 90 bp ACGAAACTGAAACCTGTGAAACCCAGGAAAATGGCACCTCCTTCATaGTTTCCAGAAGAAGGGGTGCATGGAGCAGGGATCCCGGTTAGG +
Preference number: 5 (lower is better)
Translates to: TKLKPVKPRKMAPPS*FPEEGVHGAGIPVR
Trigger: CCTAACCGGGATCCCTGCTCCATGCACCCCTTCTTCTGGAAAGCATGAAGGAGGTGCCATTTTCCTGGGTTTCACAGGTTTCAGTTTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS CCA 90 bp TGCAGGACTCTGTGGCTCCTGGTAGAAGACAACCACCCTTACAGATaGAAGATGCTGGAATACGGGTTCTCGCTGCAAGTGTGTTTGAGC +
Preference number: 5 (lower is better)
Translates to: CRTLWLLVEDNHPYR*KMLEYGFSLQVCLS
Trigger: GCTCAAACACACTTGCAGCGAGAACCCGTATTCCAGCATCTTCCATCTGTAAGGGTGGTTGTCTTCTACCAGGAGCCACAGAGTCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS-3UTR CAA 90 bp CAGTGGCCATTGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTATGAAGGACACGGCCTaGGTGTTGATGATGCCGCTG +
Preference number: 5 (lower is better)
Translates to: QWPLEMFITLLRLDTQPCMKDTA*VLMMPL
Trigger: CAGCGGCATCATCAACACCAAGGCCGTGTCCTTCAT...ACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCAATGGCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp GGCCTGTTGGGATCAGCTCAGTCTGTGACTAAAACAGCTGGATCATCGACTCTCTATATTCTTCCCCTCTaGTGCCTGGCGCTGCACTTC +
Preference number: 5 (lower is better)
Translates to: GLLGSAQSVTKTAGSSTLYILPL*CLALHF
Trigger: GAAGTGCAGCGCCAGGCACAAGAGGGGAAGAATATA...GAGAGTCGATGATCCAGCTGTTTTAGTCACAGACTGAGCTGATCCCAACAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR CAA 90 bp TGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGCCGCCCACGGTGCAGTaGGATGAAGTCACAAAGGGG +
Preference number: 5 (lower is better)
Translates to: WTRNHVTLMCHRRSLSTLPPTVQ*DEVTKG
Trigger: CCCCTTTGTGACTTCATCCAACTGCACCGTGGGCGG...CAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp GCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTTTTCCCGTTCAGCTaGTATGAGACACCGACTTTA +
Preference number: 5 (lower is better)
Translates to: AAVYTSPDAARACWDQLSLFPFS*YETPTL
Trigger: TAAAGTCGGTGTCTCATACAAGCTGAACGGGAAAAG...ACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp CCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACACCTTTTCCCGTTCAGCTaGTATGAGACACCGACTTTA +
Preference number: 5 (lower is better)
Translates to: PALVLVVAAEERDCCCLHLFPFS*YETPTL
Trigger: TAAAGTCGGTGTCTCATACAAGCTGAACGGGAAAAG...GTGTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp TGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGCTGCTTTGGTGTTGGTaGTGGCGGCCGAGGAACGTG +
Preference number: 5 (lower is better)
Translates to: WRCLLHCFGWTRNHVTLMLLWCW*WRPRNV
Trigger: CACGTTCCTCGGCCGCCACAACCAACACCAAAGCAG...CATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS TCA 90 bp TCACCCCTCTCTGAGAAGTCACAGGTCCTATCTATTCCAATACCATaGAACGGCCCAACAGGCAGAACGGTTGCCCCACTTCACATACCT +
Preference number: 5 (lower is better)
Translates to: SPLSEKSQVLSIPIP*NGPTGRTVAPLHIP
Trigger: AGGTATGTGAAGTGGGGCAACCGTTCTGCCTGTTGGGCCGTTTCATGGTATTGGAATAGATAGGACCTGTGACTTCTCAGAGAGGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS-3UTR CAA 90 bp TCAGTGGCCATTGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTATATTCTTCCCCTCTaGTGCCTGGCGCTGCACTTC +
Preference number: 5 (lower is better)
Translates to: SVAIGDVYYTASAGHATMYILPL*CLALHF
Trigger: GAAGTGCAGCGCCAGGCACAAGAGGGGAAGAATATA...CATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCAATGGCCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330877.7
ENST00000332972.9
CDS-3UTR CAA 90 bp GCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTTGGGATCAGCTCAGTCTTGAGCCTTTTGAGTaGGCCTTCAATGTCTATTTC +
Preference number: 5 (lower is better)
Translates to: AAVYTSPDAARACWDQLSLEPFE*AFNVYF
Trigger: GAAATAGACATTGAAGGCCAACTCAAAAGGCTCAAG...ACTGAGCTGATCCCAACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp TCAGTGGCCATTGGAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGGGATCATCGACTCTCTaGACTTGCCAACACCAACCC +
Preference number: 5 (lower is better)
Translates to: SVAIGDVYYTASAGHATMGSSTL*TCQHQP
Trigger: GGGTTGGTGTTGGCAAGTCAAGAGAGTCGATGATCC...CATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCAATGGCCACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000556623.1
CDS-3UTR CAA 90 bp GGCTGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTGGATCATCGACTCTCTaGACTTGCCAACACCAACCC +
Preference number: 5 (lower is better)
Translates to: GWTRNHVTLMCHRRSLSTGSSTL*TCQHQP
Trigger: GGGTTGGTGTTGGCAAGTCAAGAGAGTCGATGATCC...AGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CAA 90 bp ATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGTCACTGCTTTGGTGTTGGTaGTGGCGGCCGAGGAACGTG +
Preference number: 5 (lower is better)
Translates to: MFITLLRLDTQPCDTNVSLLWCW*WRPRNV
Trigger: CACGTTCCTCGGCCGCCACAACCAACACCAAAGCAG...TGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CAA 90 bp GATTCTCCACAAAGCGGATGTAGTTCTGGGCCTGTGGGGGCAGGTCCTCCCACCAGGTCTCTGAGCACTTaGGCTCATTTTGAATATAAT +
Preference number: 5 (lower is better)
Translates to: DSPQSGCSSGPVGAGPPTRSLST*AHFEYN
Trigger: ATTATATTCAAAATGAGCCAAAGTGCTCAGAGACCT...GGTGGGAGGACCTGCCCCCACAGGCCCAGAACTACATCCGCTTTGTGGAGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR CAA 90 bp CGTTTCATACTCAACTTCGACCTTCTGAAGCATCTCCTGGTTAGCTGGGAAATATGTGGCCTCCTGCATTaGACCCGTGGCTCCTCCAAG +
Preference number: 5 (lower is better)
Translates to: RFILNFDLLKHLLVSWEICGLLH*TRGSSK
Trigger: CTTGGAGGAGCCACGGGTCAAATGCAGGAGGCCACA...TATTTCCCAGCTAACCAGGAGATGCTTCAGAAGGTCGAAGTTGAGTATGAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553540.5
CDS-3UTR CAA 90 bp CCGAGGAACGTGACTGCTGCTGTTTACACAAGTCCAGACGCTGCCAGGGCCTGTAGGTCTCTGAGCACTTaGGCTCATTTTGAATATAAT +
Preference number: 5 (lower is better)
Translates to: PRNVTAAVYTSPDAARACRSLST*AHFEYN
Trigger: ATTATATTCAAAATGAGCCAAAGTGCTCAGAGACCT...ACAGGCCCTGGCAGCGTCTGGACTTGTGTAAACAGCAGCAGTCACGTTCCTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS TCA 90 bp TCACATACCTGGGAAATAGGGAATCCTTTTCCCGTTCAGCTTGTATaGGACACCGACTTTAACCTCACCCAGTACGTCCAGGATGTCCAG +
Preference number: 5 (lower is better)
Translates to: SHTWEIGNPFPVQLV*DTDFNLTQYVQDVQ
Trigger: CTGGACATCCTGGACGTACTGGGTGAGGTTAAAGTCGGTGTCTCATACAAGCTGAACGGGAAAAGGATTCCCTATTTCCCAGGTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553580.1
ENST00000557271.5
CDS GCA 90 bp CCTATCTATTCCAATACCATGAAACGGCCCAACAGGCAGAACGGTTaGCCCACTTCACATACCTGGGAAATAGGGAATCCTTTTCCCGTT +
Preference number: 5 (lower is better)
Translates to: PIYSNTMKRPNRQNG*PTSHTWEIGNPFPV
Trigger: AACGGGAAAAGGATTCCCTATTTCCCAGGTATGTGAAGTGGGGCAACCGTTCTGCCTGTTGGGCCGTTTCATGGTATTGGAATAGATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS-3UTR CAA 90 bp TGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGTATATTCTTCCCCTCTaGTGCCTGGCGCTGCACTTC +
Preference number: 5 (lower is better)
Translates to: WTRNHVTLMCHRRSLSTLYILPL*CLALHF
Trigger: GAAGTGCAGCGCCAGGCACAAGAGGGGAAGAATATA...CAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp TTCGGCTGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCATCGACTCTCTTGACTaGCCAACACCAACCCATTTG +
Preference number: 5 (lower is better)
Translates to: FGWTRNHVTLMCHRRSLSIDSLD*PTPTHL
Trigger: CAAATGGGTTGGTGTTGGCAAGTCAAGAGAGTCGAT...GCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CAA 90 bp TGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGTCATTTTCCTGCTTTGGTGTaGGTTGTGGCGGCCGAGGAA +
Preference number: 5 (lower is better)
Translates to: CLLHCFGWTRNHVTLMCHFPALV*VVAAEE
Trigger: TTCCTCGGCCGCCACAACCAACACCAAAGCAGGAAA...ATGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS CCA 90 bp CTCCCATTCAGTGGCCATTGGAGATGTTTATTACACTGCTTCGGCTaGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: LPFSGHWRCLLHCFG*TRNHVTLMCHRRSL
Trigger: CAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCAATGGCCACTGAATGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555884.6
CDS-3UTR CAA 90 bp GAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGCTTTGGAAGAGTAGGTaGGTCCGATTCCCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: EMFITLLRLDTQPCDTNVLWKSR*VRFPSW
Trigger: CCAAGAAGGGAATCGGACCAACCTACTCTTCCAAAG...CACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp TGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGTGGTGGGCCAGGTTCTaGAATCTGGAGGAAAACTCA +
Preference number: 5 (lower is better)
Translates to: WTRNHVTLMCHRRSLSTLWWARF*NLEENS
Trigger: TGAGTTTTCCTCCAGATTCAAGAACCTGGCCCACCA...CAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp TTCCTGCTTTGGTGTTGGTTGTGGCGGCCGAGGAACGTGACTGCTGCTGTTTACAGGTCTCTGAGCACTTaGGCTCATTTTGAATATAAT +
Preference number: 5 (lower is better)
Translates to: FLLWCWLWRPRNVTAAVYRSLST*AHFEYN
Trigger: ATTATATTCAAAATGAGCCAAAGTGCTCAGAGACCT...GTAAACAGCAGCAGTCACGTTCCTCGGCCGCCACAACCAACACCAAAGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS-3UTR CAA 90 bp ATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGTCAGGCACGTGGCCCAGTTaGATTTTCTCAGTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: MFITLLRLDTQPCDTNVSGTWPS*IFSVLG
Trigger: ACCCAACACTGAGAAAATCAAACTGGGCCACGTGCC...TGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556623.1
CDS CCA 90 bp GTGAAATTCATAGAGATAGAAAGTAGAATGGGAGGCGCCAGGGGCTaGGAGAGGGAGACTGGGGAGTTATTTGATATTTCAGCATTTCAG +
Preference number: 5 (lower is better)
Translates to: VKFIEIESRMGGARG*ERETGELFDISAFQ
Trigger: CTGAAATGCTGAAATATCAAATAACTCCCCAGTCTCCCTCTCCCAGCCCCTGGCGCCTCCCATTCTACTTTCTATCTCTATGAATTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557582.5
CDS-3UTR CAA 90 bp TTCGGCTGGACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCCTTGAGCCTTTTGAGTaGGCCTTCAATGTCTATTTC +
Preference number: 5 (lower is better)
Translates to: FGWTRNHVTLMCHRRSLSLEPFE*AFNVYF
Trigger: GAAATAGACATTGAAGGCCAACTCAAAAGGCTCAAG...GCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp GAGATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGAAGCCCTTGAGCCTTTaGAGTTGGCCTTCAATGTCT +
Preference number: 5 (lower is better)
Translates to: EMFITLLRLDTQPCDTNVKPLSL*SWPSMS
Trigger: AGACATTGAAGGCCAACTCAAAAGGCTCAAGGGCTT...CACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp ACACGCAACCATGTGACACTAATGTGTCATAGAAGGTCTCTGAGCACTTTGGCTCTTGAGCCTTTTGAGTaGGCCTTCAATGTCTATTTC +
Preference number: 5 (lower is better)
Translates to: TRNHVTLMCHRRSLSTLALEPFE*AFNVYF
Trigger: GAAATAGACATTGAAGGCCAACTCAAAAGGCTCAAG...AGCCAAAGTGCTCAGAGACCTTCTATGACACATTAGTGTCACATGGTTGCGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS-3UTR CAA 90 bp ATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGTCACTTTTCCCGTTCAGCTaGTATGAGACACCGACTTTA +
Preference number: 5 (lower is better)
Translates to: MFITLLRLDTQPCDTNVSLFPFS*YETPTL
Trigger: TAAAGTCGGTGTCTCATACAAGCTGAACGGGAAAAG...TGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
CDS CCA 90 bp GATATTTCAGCATTTCAGTGTGTGAAGATAAGAAAGTTCTGGAGGTaGATGGTGGTGATGGATGCAAAACACATTCCTCGGTATTTAAGG +
Preference number: 5 (lower is better)
Translates to: DISAFQCVKIRKFWR*MVVMDAKHIPRYLR
Trigger: CCTTAAATACCGAGGAATGTGTTTTGCATCCATCACCACCATCCACCTCCAGAACTTTCTTATCTTCACACACTGAAATGCTGAAATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557582.5
CDS-3UTR CAA 90 bp ATGTTTATTACACTGCTTCGGCTGGACACGCAACCATGTGACACTAATGTGTCAAGGTCTCTGAGCACTTaGGCTCATTTTGAATATAAT +
Preference number: 5 (lower is better)
Translates to: MFITLLRLDTQPCDTNVSRSLST*AHFEYN
Trigger: ATTATATTCAAAATGAGCCAAAGTGCTCAGAGACCT...TGACACATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000556623.1
CDS CCA 72 bp GGGGCCGGTCGTTGGAGGCTCGGGTCCCCGACATGCTaGCTTGGCTCTTCCGCTGCGCTGGCCCGGCCAGGA +
Preference number: 6 (lower is better)
Translates to: GAGRWRLGSPTC*LGSSAALARPG
Trigger: TCCTGGCCGGGCCAGCGCAGCGGAAGAGCCAAGCCAGCATGTCGGGGACCCGAGCCTCCAACGACCGGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330877.7
CDS CAA 72 bp CCGGTCGTTGGAGGCTCGGGTCCCCGACATGCTGGCTaGGCTCTTCCGCTGCGCTGGCCCGGCCAGGAGCCC +
Preference number: 6 (lower is better)
Translates to: PVVGGSGPRHAG*ALPLRWPGQEP
Trigger: GGGCTCCTGGCCGGGCCAGCGCAGCGGAAGAGCCAAGCCAGCATGTCGGGGACCCGAGCCTCCAACGACCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330877.7
CDS CAA 90 bp CGGCTCCTGCAGTCCTCCTGGGCAGGCAGGTGTGGCCTCCTGCATTaGACCCGTGGCTCCTCCAAGCCCTCTCCTCTCCCAGCGTCACCC +
Preference number: 6 (lower is better)
Translates to: RLLQSSWAGRCGLLH*TRGSSKPSPLPASP
Trigger: GGGTGACGCTGGGAGAGGAGAGGGCTTGGAGGAGCCACGGGTCAAATGCAGGAGGCCACACCTGCCTGCCCAGGAGGACTGCAGGAGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS CAA 72 bp GACTTGGTGGCCCTCAGCCCCTGCGTCAAGTGCTGCTaGCCTCTGCAGGTGTCGGGAGTCAGGGACGGTCCC +
Preference number: 6 (lower is better)
Translates to: DLVALSPCVKCC*PLQVSGVRDGP
Trigger: GGGACCGTCCCTGACTCCCGACACCTGCAGAGGCAAGCAGCACTTGACGCAGGGGCTGAGGGCCACCAAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CAA 90 bp TGGGCTGAGCTGGCACGGAGTGGCCACTCAGTAACTGGAGACTCCTaGGAGGCAGCCAGGGGAGGGCTGTGCTGTGAGCTGGGGACGAGC +
Preference number: 6 (lower is better)
Translates to: WAELARSGHSVTGDS*EAARGGLCCELGTS
Trigger: GCTCGTCCCCAGCTCACAGCACAGCCCTCCCCTGGCTGCCTCCAAGGAGTCTCCAGTTACTGAGTGGCCACTCCGTGCCAGCTCAGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332972.9
ENST00000553540.5
CDS GCA 72 bp GGAGACTTGGTGGCCCTCAGCCCCTGCGTCAAGTGCTaGTTGCCTCTGCAGGTGTCGGGAGTCAGGGACGGT +
Preference number: 6 (lower is better)
Translates to: GDLVALSPCVKC*LPLQVSGVRDG
Trigger: ACCGTCCCTGACTCCCGACACCTGCAGAGGCAAGCAGCACTTGACGCAGGGGCTGAGGGCCACCAAGTCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CAA 90 bp GTCCAAGGAGACTTGGTGGCCCTCAGCCCCTGCGTCAAGTGCTGCTaGCCTCTGCAGGTGTCGGGAGTCAGGGACGGTCCCAGTGGGGAT +
Preference number: 6 (lower is better)
Translates to: VQGDLVALSPCVKCC*PLQVSGVRDGPSGD
Trigger: ATCCCCACTGGGACCGTCCCTGACTCCCGACACCTGCAGAGGCAAGCAGCACTTGACGCAGGGGCTGAGGGCCACCAAGTCTCCTTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CAA 90 bp CCGGGATGCCCTCATCCTTCACGGCATCAGCCCTGGGGTGGGAGTTaGTGCTCCTACGGCTGGCTCCAACACACCCTGCACAGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: PGCPHPSRHQPWGGS*CSYGWLQHTLHRPP
Trigger: TGGAGGCCTGTGCAGGGTGTGTTGGAGCCAGCCGTAGGAGCACAAACTCCCACCCCAGGGCTGATGCCGTGAAGGATGAGGGCATCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CCA 72 bp CATCAGCCCTGGGGTGGGAGTTTGTGCTCCTACGGCTaGCTCCAACACACCCTGCACAGGCCTCCATACCGC +
Preference number: 6 (lower is better)
Translates to: HQPWGGSLCSYG*LQHTLHRPPYR
Trigger: GCGGTATGGAGGCCTGTGCAGGGTGTGTTGGAGCCAGCCGTAGGAGCACAAACTCCCACCCCAGGGCTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS GCA 72 bp GGAGTTTGTGCTCCTACGGCTGGCTCCAACACACCCTaGACAGGCCTCCATACCGCTAACCTCTGGGCCGTG +
Preference number: 6 (lower is better)
Translates to: GVCAPTAGSNTP*TGLHTANLWAV
Trigger: CACGGCCCAGAGGTTAGCGGTATGGAGGCCTGTGCAGGGTGTGTTGGAGCCAGCCGTAGGAGCACAAACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS GCA 72 bp CATCCTTCACGGCATCAGCCCTGGGGTGGGAGTTTGTaGTCCTACGGCTGGCTCCAACACACCCTGCACAGG +
Preference number: 6 (lower is better)
Translates to: HPSRHQPWGGSL*SYGWLQHTLHR
Trigger: CCTGTGCAGGGTGTGTTGGAGCCAGCCGTAGGAGCACAAACTCCCACCCCAGGGCTGATGCCGTGAAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CCA 72 bp GGGATGCCCTCATCCTTCACGGCATCAGCCCTGGGGTaGGAGTTTGTGCTCCTACGGCTGGCTCCAACACAC +
Preference number: 6 (lower is better)
Translates to: GMPSSFTASALG*EFVLLRLAPTH
Trigger: GTGTGTTGGAGCCAGCCGTAGGAGCACAAACTCCCACCCCAGGGCTGATGCCGTGAAGGATGAGGGCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CCA 72 bp ACGTCCAGGATGTCCAGCTTCGTCAGGGCCAGCCTGTaGAAAGCCAAGGGGCCGGGCAAACCCAAGAAGTGG +
Preference number: 6 (lower is better)
Translates to: TSRMSSFVRASL*KAKGPGKPKKW
Trigger: CCACTTCTTGGGTTTGCCCGGCCCCTTGGCTTTCCACAGGCTGGCCCTGACGAAGCTGGACATCCTGGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555884.6
ENST00000557271.5
CDS CCA 72 bp GGAGCCAGGCAGTGTTTGCGTGTCCCCCTGGGACCCTaGACCACCATGAGGAGAGCTTGCAGTCCTCACAAG +
Preference number: 6 (lower is better)
Translates to: GARQCLRVPLGP*TTMRRACSPHK
Trigger: CTTGTGAGGACTGCAAGCTCTCCTCATGGTGGTCCAGGGTCCCAGGGGGACACGCAAACACTGCCTGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS CAA 72 bp CCTCATCCTTCACGGCATCAGCCCTGGGGTGGGAGTTaGTGCTCCTACGGCTGGCTCCAACACACCCTGCAC +
Preference number: 6 (lower is better)
Translates to: PHPSRHQPWGGS*CSYGWLQHTLH
Trigger: GTGCAGGGTGTGTTGGAGCCAGCCGTAGGAGCACAAACTCCCACCCCAGGGCTGATGCCGTGAAGGATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CAA 90 bp GGGTTCTCGCTGCAAGTGTGTTTGAGCCTTGGAGCCAGGCAGTGTTaGCGTGTCCCCCTGGGACCCTGGACCACCATGAGGAGAGCTTGC +
Preference number: 6 (lower is better)
Translates to: GFSLQVCLSLGARQC*RVPLGPWTTMRRAC
Trigger: GCAAGCTCTCCTCATGGTGGTCCAGGGTCCCAGGGGGACACGCAAACACTGCCTGGCTCCAAGGCTCAAACACACTTGCAGCGAGAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS TCA 72 bp CAGGCCGGCACCCATGCTGCCGTCCTTCTAGCAGGATaGCAGTGCATCCTTTCGTCCTGGGTACTTCCGCTC +
Preference number: 6 (lower is better)
Translates to: QAGTHAAVLLAG*QCILSSWVLPL
Trigger: GAGCGGAAGTACCCAGGACGAAAGGATGCACTGTCATCCTGCTAGAAGGACGGCAGCATGGGTGCCGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS GCA 72 bp ATCTTCCAGAGCCGACCGCATCCACTAACTCCTGTGTaGCTCCCGTGGCTCCCTGCAGGTGGGCCTTTTCCT +
Preference number: 6 (lower is better)
Translates to: IFQSRPHPLTPV*LPWLPAGGPFP
Trigger: AGGAAAAGGCCCACCTGCAGGGAGCCACGGGAGGCACACAGGAGTTAGTGGATGCGGTCGGCTCTGGAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS GCA 72 bp CAAAGGTCAAGGGTCAGGAGGGTCAGGGACACCGCCTaGAAGGACACACATGGCTCCTGTAGCCAAGTGGCC +
Preference number: 6 (lower is better)
Translates to: QRSRVRRVRDTA*KDTHGSCSQVA
Trigger: GGCCACTTGGCTACAGGAGCCATGTGTGTCCTTGCAGGCGGTGTCCCTGACCCTCCTGACCCTTGACCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS GCA 72 bp AGCATCAACTCCCAGAGGGCAGGGATCCCGGCCCTGTaGAGGACTCTGTGGCTCCTGGTAGAAGACAACCAC +
Preference number: 6 (lower is better)
Translates to: SINSQRAGIPAL*RTLWLLVEDNH
Trigger: GTGGTTGTCTTCTACCAGGAGCCACAGAGTCCTGCACAGGGCCGGGATCCCTGCCCTCTGGGAGTTGATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS GCA 72 bp CATCCCGAAACCATCCGCCGCCACACCCCTGCCACCTaGCCTGTCTGTGGGAAAATCATCTCCCGCCAAACT +
Preference number: 6 (lower is better)
Translates to: HPETIRRHTPAT*PVCGKIISRQT
Trigger: AGTTTGGCGGGAGATGATTTTCCCACAGACAGGGCAGGTGGCAGGGGTGTGGCGGCGGATGGTTTCGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555884.6
CDS CCA 72 bp GGGTCCCCAGTCCCTGGGCTGTGGACCAGTACTGGTTaGTGGCCTGTTTGGAATTGGGCTGCAGAGCAGATG +
Preference number: 6 (lower is better)
Translates to: GSPVPGLWTSTG*WPVWNWAAEQM
Trigger: CATCTGCTCTGCAGCCCAATTCCAAACAGGCCACCAACCAGTACTGGTCCACAGCCCAGGGACTGGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555884.6
CDS CAA 72 bp GGGGTCCCCAGTCCCTGGGCTGTGGACCAGTACTGGTaGGTGGCCTGTTTGGAATTGGGCTGCAGAGCAGAT +
Preference number: 6 (lower is better)
Translates to: GVPSPWAVDQYW*VACLELGCRAD
Trigger: ATCTGCTCTGCAGCCCAATTCCAAACAGGCCACCAACCAGTACTGGTCCACAGCCCAGGGACTGGGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555884.6
CDS TCA 72 bp CACAGACCTCCTATCACCAGGGAAGCGGATATTTGGTaGCACGGCCACCCCCATCCAGGGCCTCCTTGCCTA +
Preference number: 6 (lower is better)
Translates to: HRPPITREADIW*HGHPHPGPPCL
Trigger: TAGGCAAGGAGGCCCTGGATGGGGGTGGCCGTGTCACCAAATATCCGCTTCCCTGGTGATAGGAGGTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555674.1
ENST00000557271.5
CDS GCA 72 bp GCCATGATGGAGGCTGGTCACTGGAGACAAGCTGCTTaGCCTGTGTCCTGTGAACGTGGGAACTCACCCCTC +
Preference number: 6 (lower is better)
Translates to: AMMEAGHWRQAA*PVSCERGNSPL
Trigger: GAGGGGTGAGTTCCCACGTTCACAGGACACAGGGCAAGCAGCTTGTCTCCAGTGACCAGCCTCCATCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS GCA 72 bp GTCCCCCTGGGACCCTGGACCACCATGAGGAGAGCTTaGAGTCCTCACAAGTGCAGCCTCTCAAAGGTCAAG +
Preference number: 6 (lower is better)
Translates to: VPLGPWTTMRRA*SPHKCSLSKVK
Trigger: CTTGACCTTTGAGAGGCTGCACTTGTGAGGACTGCAAGCTCTCCTCATGGTGGTCCAGGGTCCCAGGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS GCA 72 bp ACAGTTTCATCCCGAAACCATCCGCCGCCACACCCCTaGCACCTGCCCTGTCTGTGGGAAAATCATCTCCCG +
Preference number: 6 (lower is better)
Translates to: TVSSRNHPPPHP*HLPCLWENHLP
Trigger: CGGGAGATGATTTTCCCACAGACAGGGCAGGTGGCAGGGGTGTGGCGGCGGATGGTTTCGGGATGAAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555884.6
CDS CCA 72 bp ACGGCCTTGGTGTTGATGATGCCGCTGGGCAGCAGGTaGAAGTCGTACTCTTTCCCATCCACCACCACCGTG +
Preference number: 6 (lower is better)
Translates to: TALVLMMPLGSR*KSYSFPSTTTV
Trigger: CACGGTGGTGGTGGATGGGAAAGAGTACGACTTCCACCTGCTGCCCAGCGGCATCATCAACACCAAGGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555486.5
CDS CCA 72 bp GGGTCGAGATCAGTGGAAACCTTGTCCAAGGAGACTTaGTGGCCCTCAGCCCCTGCGTCAAGTGCTGCTTGC +
Preference number: 6 (lower is better)
Translates to: GSRSVETLSKET*WPSAPASSAAC
Trigger: GCAAGCAGCACTTGACGCAGGGGCTGAGGGCCACCAAGTCTCCTTGGACAAGGTTTCCACTGATCTCGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CCA 72 bp GGAATACGGGTTCTCGCTGCAAGTGTGTTTGAGCCTTaGAGCCAGGCAGTGTTTGCGTGTCCCCCTGGGACC +
Preference number: 6 (lower is better)
Translates to: GIRVLAASVFEP*SQAVFACPPGT
Trigger: GGTCCCAGGGGGACACGCAAACACTGCCTGGCTCCAAGGCTCAAACACACTTGCAGCGAGAACCCGTATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS CCA 72 bp CCTGGGCTGTGGACCAGTACTGGTTGGTGGCCTGTTTaGAATTGGGCTGCAGAGCAGATGAGTGGCGGGCAA +
Preference number: 6 (lower is better)
Translates to: PGLWTSTGWWPV*NWAAEQMSGGQ
Trigger: TTGCCCGCCACTCATCTGCTCTGCAGCCCAATTCCAAACAGGCCACCAACCAGTACTGGTCCACAGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555884.6
CDS CAA 72 bp ACCACCCCGTTGCCAATGAAGGACACGGCCTTGGTGTaGATGATGCCGCTGGGCAGCAGGTGGAAGTCGTAC +
Preference number: 6 (lower is better)
Translates to: TTPLPMKDTALV*MMPLGSRWKSY
Trigger: GTACGACTTCCACCTGCTGCCCAGCGGCATCATCAACACCAAGGCCGTGTCCTTCATTGGCAACGGGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555486.5
CDS CAA 72 bp TGGATGACCACCCCGTTGCCAATGAAGGACACGGCCTaGGTGTTGATGATGCCGCTGGGCAGCAGGTGGAAG +
Preference number: 6 (lower is better)
Translates to: WMTTPLPMKDTA*VLMMPLGSRWK
Trigger: CTTCCACCTGCTGCCCAGCGGCATCATCAACACCAAGGCCGTGTCCTTCATTGGCAACGGGGTGGTCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555486.5
CDS CAA 72 bp TATTTGGTGACACGGCCACCCCCATCCAGGGCCTCCTaGCCTAGGGACTCAGCTGCAAGGAAGGCAGCAAGT +
Preference number: 6 (lower is better)
Translates to: YLVTRPPPSRAS*PRDSAARKAAS
Trigger: ACTTGCTGCCTTCCTTGCAGCTGAGTCCCTAGGCAAGGAGGCCCTGGATGGGGGTGGCCGTGTCACCAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555674.1
ENST00000557271.5
CDS CAA 90 bp ACCTCTGGGCCGTGCTTTGTGGAAGGGTCGAGATCAGTGGAAACCTaGTCCAAGGAGACTTGGTGGCCCTCAGCCCCTGCGTCAAGTGCT +
Preference number: 6 (lower is better)
Translates to: TSGPCFVEGSRSVET*SKETWWPSAPASSA
Trigger: AGCACTTGACGCAGGGGCTGAGGGCCACCAAGTCTCCTTGGACAAGGTTTCCACTGATCTCGACCCTTCCACAAAGCACGGCCCAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CAA 90 bp GTGTTTGCGTGTCCCCCTGGGACCCTGGACCACCATGAGGAGAGCTaGCAGTCCTCACAAGTGCAGCCTCTCAAAGGTCAAGGGTCAGGA +
Preference number: 6 (lower is better)
Translates to: VFACPPGTLDHHEES*QSSQVQPLKGQGSG
Trigger: TCCTGACCCTTGACCTTTGAGAGGCTGCACTTGTGAGGACTGCAAGCTCTCCTCATGGTGGTCCAGGGTCCCAGGGGGACACGCAAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS CAA 90 bp GGGACTCAGCTGCAAGGAAGGCAGCAAGTGGGCACGTGGCCCAGTTaGATTTTCTCAGTGTTGGGTGGTAAGCAGGGGACAGCAGTGGGG +
Preference number: 6 (lower is better)
Translates to: GTQLQGRQQVGTWPS*IFSVLGGKQGTAVG
Trigger: CCCCACTGCTGTCCCCTGCTTACCACCCAACACTGAGAAAATCAAACTGGGCCACGTGCCCACTTGCTGCCTTCCTTGCAGCTGAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556623.1
ENST00000557271.5
CDS CAA 90 bp CTTTGTGGAAGGGTCGAGATCAGTGGAAACCTTGTCCAAGGAGACTaGGTGGCCCTCAGCCCCTGCGTCAAGTGCTGCTTGCCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: LCGRVEISGNLVQGD*VALSPCVKCCLPLQ
Trigger: CTGCAGAGGCAAGCAGCACTTGACGCAGGGGCTGAGGGCCACCAAGTCTCCTTGGACAAGGTTTCCACTGATCTCGACCCTTCCACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS TCA 72 bp ACGCTGTGGGGAGAAACCCGTGAGAGGCAAAAGCCATaGTGGAGGCTGGTCACTGGAGACAAGCTGCTTGCC +
Preference number: 6 (lower is better)
Translates to: TLWGETRERQKP*WRLVTGDKLLA
Trigger: GGCAAGCAGCTTGTCTCCAGTGACCAGCCTCCATCATGGCTTTTGCCTCTCACGGGTTTCTCCCCACAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS GCA 72 bp CCTGCACAGGCCTCCATACCGCTAACCTCTGGGCCGTaGTTTGTGGAAGGGTCGAGATCAGTGGAAACCTTG +
Preference number: 6 (lower is better)
Translates to: PAQASIPLTSGP*FVEGSRSVETL
Trigger: CAAGGTTTCCACTGATCTCGACCCTTCCACAAAGCACGGCCCAGAGGTTAGCGGTATGGAGGCCTGTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CCA 72 bp TCGAGATCAGTGGAAACCTTGTCCAAGGAGACTTGGTaGCCCTCAGCCCCTGCGTCAAGTGCTGCTTGCCTC +
Preference number: 6 (lower is better)
Translates to: SRSVETLSKETW*PSAPASSAACL
Trigger: GAGGCAAGCAGCACTTGACGCAGGGGCTGAGGGCCACCAAGTCTCCTTGGACAAGGTTTCCACTGATCTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CCA 72 bp CCTCTGGGCCGTGCTTTGTGGAAGGGTCGAGATCAGTaGAAACCTTGTCCAAGGAGACTTGGTGGCCCTCAG +
Preference number: 6 (lower is better)
Translates to: PLGRALWKGRDQ*KPCPRRLGGPQ
Trigger: CTGAGGGCCACCAAGTCTCCTTGGACAAGGTTTCCACTGATCTCGACCCTTCCACAAAGCACGGCCCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CCA 72 bp AACACACCCTGCACAGGCCTCCATACCGCTAACCTCTaGGCCGTGCTTTGTGGAAGGGTCGAGATCAGTGGA +
Preference number: 6 (lower is better)
Translates to: NTPCTGLHTANL*AVLCGRVEISG
Trigger: TCCACTGATCTCGACCCTTCCACAAAGCACGGCCCAGAGGTTAGCGGTATGGAGGCCTGTGCAGGGTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CCA 72 bp CCGCCTGCAAGGACACACATGGCTCCTGTAGCCAAGTaGCCCTGTGTGGCCTACAAAGATCTGCTGAGTGGA +
Preference number: 6 (lower is better)
Translates to: PPARTHMAPVAK*PCVAYKDLLSG
Trigger: TCCACTCAGCAGATCTTTGTAGGCCACACAGGGCCACTTGGCTACAGGAGCCATGTGTGTCCTTGCAGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS CCA 72 bp TCCCCAGTCCCTGGGCTGTGGACCAGTACTGGTTGGTaGCCTGTTTGGAATTGGGCTGCAGAGCAGATGAGT +
Preference number: 6 (lower is better)
Translates to: SPVPGLWTSTGW*PVWNWAAEQMS
Trigger: ACTCATCTGCTCTGCAGCCCAATTCCAAACAGGCCACCAACCAGTACTGGTCCACAGCCCAGGGACTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555884.6
CDS CAA 72 bp AGGGTCGAGATCAGTGGAAACCTTGTCCAAGGAGACTaGGTGGCCCTCAGCCCCTGCGTCAAGTGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: RVEISGNLVQGD*VALSPCVKCCL
Trigger: CAAGCAGCACTTGACGCAGGGGCTGAGGGCCACCAAGTCTCCTTGGACAAGGTTTCCACTGATCTCGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CAA 72 bp TGTCCCCCTGGGACCCTGGACCACCATGAGGAGAGCTaGCAGTCCTCACAAGTGCAGCCTCTCAAAGGTCAA +
Preference number: 6 (lower is better)
Translates to: CPPGTLDHHEES*QSSQVQPLKGQ
Trigger: TTGACCTTTGAGAGGCTGCACTTGTGAGGACTGCAAGCTCTCCTCATGGTGGTCCAGGGTCCCAGGGGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS CAA 90 bp TACAGATGGAAGATGCTGGAATACGGGTTCTCGCTGCAAGTGTGTTaGAGCCTTGGAGCCAGGCAGTGTTTGCGTGTCCCCCTGGGACCC +
Preference number: 6 (lower is better)
Translates to: YRWKMLEYGFSLQVC*SLGARQCLRVPLGP
Trigger: GGGTCCCAGGGGGACACGCAAACACTGCCTGGCTCCAAGGCTCAAACACACTTGCAGCGAGAACCCGTATTCCAGCATCTTCCATCTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS TCA 72 bp ATATTCTTCCCCTCTTGTGCCTGGCGCTGCACTTCCTaGAGTCCGTCGACAGCCAAGGTGGGCTCTGTCAGA +
Preference number: 6 (lower is better)
Translates to: IFFPSCAWRCTS*SPSTAKVGSVR
Trigger: TCTGACAGAGCCCACCTTGGCTGTCGACGGACTTCAGGAAGTGCAGCGCCAGGCACAAGAGGGGAAGAATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553540.5
ENST00000557582.5
CDS GCA 72 bp TCCCTTCTTGGTGGTGCCTATATTCTTCCCCTCTTGTaGCTGGCGCTGCACTTCCTGAAGTCCGTCGACAGC +
Preference number: 6 (lower is better)
Translates to: SLLGGAYILPLL*LALHFLKSVDS
Trigger: GCTGTCGACGGACTTCAGGAAGTGCAGCGCCAGGCACAAGAGGGGAAGAATATAGGCACCACCAAGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555486.5
ENST00000557582.5
CDS GCA 72 bp GTCAGGGACGGTCCCAGTGGGGATGGCAGCATGGGTTaGTTACGCAGTGAATCCGTTGACCATGTGAGCATA +
Preference number: 6 (lower is better)
Translates to: VRDGPSGDGSMG*LRSESVDHVSI
Trigger: TATGCTCACATGGTCAACGGATTCACTGCGTAAGCAACCCATGCTGCCATCCCCACTGGGACCGTCCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS GCA 72 bp CACATGAAGCATTTTAACCTCTCACAAGTGCCGGGATaGCCTCATCCTTCACGGCATCAGCCCTGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: HMKHFNLSQVPG*PHPSRHQPWGG
Trigger: CCCACCCCAGGGCTGATGCCGTGAAGGATGAGGGCATCCCGGCACTTGTGAGAGGTTAAAATGCTTCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS CCA 72 bp CTGTGGAAAGCCAAGGGGCCGGGCAAACCCAAGAAGTaGTCAGCAGTGCTGGGGTTTCTTCCGCTTGCTTTT +
Preference number: 6 (lower is better)
Translates to: LWKAKGPGKPKK*SAVLGFLPLAF
Trigger: AAAAGCAAGCGGAAGAAACCCCAGCACTGCTGACCACTTCTTGGGTTTGCCCGGCCCCTTGGCTTTCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555884.6
ENST00000557271.5
CDS CCA 72 bp CTCAACTTCGACCTTCTGAAGCATCTCCTGGTTAGCTaGGGGAAGCACACAGGAGATGAGTGGGGCCCACAG +
Preference number: 6 (lower is better)
Translates to: LNFDLLKHLLVS*GKHTGDEWGPQ
Trigger: CTGTGGGCCCCACTCATCTCCTGTGTGCTTCCCCCAGCTAACCAGGAGATGCTTCAGAAGGTCGAAGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555674.1
ENST00000557271.5
CDS TCA 72 bp GAGCAGATGAGTGGCGGGCAAGCTAGCATTACGGCCTaGGCTCCACCTCCTGTCATTCAATTCTCACAGGAG +
Preference number: 6 (lower is better)
Translates to: EQMSGGQASITA*APPPVIQFSQE
Trigger: CTCCTGTGAGAATTGAATGACAGGAGGTGGAGCTCAGGCCGTAATGCTAGCTTGCCCGCCACTCATCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555884.6
CDS CAA 72 bp CTGCAAGGAAGGCAGCAAGTGGGCACGTGGCCCAGTTaGATTTTCTCAGTGTTGGGTGGTAAGCAGGGGACA +
Preference number: 6 (lower is better)
Translates to: LQGRQQVGTWPS*IFSVLGGKQGT
Trigger: TGTCCCCTGCTTACCACCCAACACTGAGAAAATCAAACTGGGCCACGTGCCCACTTGCTGCCTTCCTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556623.1
ENST00000557271.5
CDS TCA 72 bp GCTCAGACACTACACGCCTTCCAGACCAGAGGGACATaGCACATATGTGCTACCCACTCTGCTAGAACCTCC +
Preference number: 6 (lower is better)
Translates to: AQTLHAFQTRGT*HICATHSARTS
Trigger: GGAGGTTCTAGCAGAGTGGGTAGCACATATGTGTCATGTCCCTCTGGTCTGGAAGGCGTGTAGTGTCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS TCA 72 bp CACCCAGGCAGCGTTTCATACTCAACTTCGACCTTCTaGAGCATCTCCTGGTTAGCTGGGGGAAGCACACAG +
Preference number: 6 (lower is better)
Translates to: HPGSVSYSTSTF*SISWLAGGSTQ
Trigger: CTGTGTGCTTCCCCCAGCTAACCAGGAGATGCTTCAGAAGGTCGAAGTTGAGTATGAAACGCTGCCTGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555674.1
ENST00000557271.5
CDS TCA 72 bp CACCCAGGCAGCGTTTCATACTCAACTTCGACCTTCTaGAGCATCTCCTGGTTAGCTAGGGACTCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: HPGSVSYSTSTF*SISWLARDSAA
Trigger: TGCAGCTGAGTCCCTAGCTAACCAGGAGATGCTTCAGAAGGTCGAAGTTGAGTATGAAACGCTGCCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556623.1
CDS CCA 72 bp CTGTGGCTCCTGGTAGAAGACAACCACCCTTACAGATaGAAGATGCTGGAATACGGGTTCTCGCTGCAAGTG +
Preference number: 6 (lower is better)
Translates to: LWLLVEDNHPYR*KMLEYGFSLQV
Trigger: CACTTGCAGCGAGAACCCGTATTCCAGCATCTTCCATCTGTAAGGGTGGTTGTCTTCTACCAGGAGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS TCA 72 bp GCATGGGTTGCTTACGCAGTGAATCCGTTGACCATGTaGGCATATCTTAGAATCATCAGGTCGAGCCAGCCG +
Preference number: 6 (lower is better)
Translates to: AWVAYAVNPLTM*AYLRIIRSSQP
Trigger: CGGCTGGCTCGACCTGATGATTCTAAGATATGCTCACATGGTCAACGGATTCACTGCGTAAGCAACCCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554281.1
CDS GCA 72 bp TCCAATACCATGAAACGGCCCAACAGGCAGAACGGTTaGCCCACTTCACATACCTGGGAAATAGGGAATCCT +
Preference number: 6 (lower is better)
Translates to: SNTMKRPNRQNG*PTSHTWEIGNP
Trigger: AGGATTCCCTATTTCCCAGGTATGTGAAGTGGGGCAACCGTTCTGCCTGTTGGGCCGTTTCATGGTATTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553580.1
ENST00000557271.5
CDS GCA 72 bp AGGGATCTAGGCCACATGCTCCTTGTGAGAATCGAATaGCTGAAGATCAGAGGTGGGACAGTTTCATCCCGA +
Preference number: 6 (lower is better)
Translates to: RDLGHMLLVRIE*LKIRGGTVSSR
Trigger: TCGGGATGAAACTGTCCCACCTCTGATCTTCAGGCATTCGATTCTCACAAGGAGCATGTGGCCTAGATCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555884.6
CDS CCA 72 bp TCTATTTCCAGGGTGGGGAACATCGACTGGTGCTGGTaGGCCAGGTTCTTGAATCTGGAGGAAAACTCATCA +
Preference number: 6 (lower is better)
Translates to: SISRVGNIDWCW*ARFLNLEENSS
Trigger: TGATGAGTTTTCCTCCAGATTCAAGAACCTGGCCCACCAGCACCAGTCGATGTTCCCCACCCTGGAAATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330877.7
ENST00000332972.9
ENST00000553540.5
ENST00000555486.5
ENST00000557582.5
CDS CCA 72 bp CCCAACAGGCAGAACGGTTGCCCCACTTCACATACCTaGGAAATAGGGAATCCTTTTCCCGTTCAGCTTGTA +
Preference number: 6 (lower is better)
Translates to: PNRQNGCPTSHT*EIGNPFPVQLV
Trigger: TACAAGCTGAACGGGAAAAGGATTCCCTATTTCCCAGGTATGTGAAGTGGGGCAACCGTTCTGCCTGTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553580.1
ENST00000557271.5
CDS CAA 72 bp TTCCAATACCATGAAACGGCCCAACAGGCAGAACGGTaGCCCCACTTCACATACCTGGGAAATAGGGAATCC +
Preference number: 6 (lower is better)
Translates to: FQYHETAQQAER*PHFTYLGNRES
Trigger: GGATTCCCTATTTCCCAGGTATGTGAAGTGGGGCAACCGTTCTGCCTGTTGGGCCGTTTCATGGTATTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553580.1
ENST00000557271.5
CDS TCA 72 bp TCTGAGAAGTCACAGGTCCTATCTATTCCAATACCATaGAACGGCCCAACAGGCAGAACGGTTGCCCCACTT +
Preference number: 6 (lower is better)
Translates to: SEKSQVLSIPIP*NGPTGRTVAPL
Trigger: AAGTGGGGCAACCGTTCTGCCTGTTGGGCCGTTTCATGGTATTGGAATAGATAGGACCTGTGACTTCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS CAA 90 bp TCCTATCTATTCCAATACCATGAAACGGCCCAACAGGCAGAACGGTaGCCCCACTTCACATACCTGGGAAATAGGGAATCCTTTTCCCGT +
Preference number: 6 (lower is better)
Translates to: SYLFQYHETAQQAER*PHFTYLGNRESFSR
Trigger: ACGGGAAAAGGATTCCCTATTTCCCAGGTATGTGAAGTGGGGCAACCGTTCTGCCTGTTGGGCCGTTTCATGGTATTGGAATAGATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557271.5
CDS GCA 72 bp CTCCCATTCAGTGGCCATTGGAGATGTTTATTACACTaGTTCGGCTGGACACGCAACCATGTGACACTAATG +
Preference number: 6 (lower is better)
Translates to: LPFSGHWRCLLH*FGWTRNHVTLM
Trigger: CATTAGTGTCACATGGTTGCGTGTCCAGCCGAAGCAGTGTAATAAACATCTCCAATGGCCACTGAATGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555884.6
CDS CCA 72 bp TTCAGAGTAGCCAAGAGCTGTCCATTGACAGATGAATaGGTAAGCAGAACACGGTCTACCCATACGATGGAA +
Preference number: 6 (lower is better)
Translates to: FRVAKSCPLTDE*VSRTRSTHTME
Trigger: TTCCATCGTATGGGTAGACCGTGTTCTGCTTACCCATTCATCTGTCAATGGACAGCTCTTGGCTACTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557582.5
CDS CAA 90 bp AACAGCTGGATCATCGACTCTCTTGACTTGCCAACACCAACCCATTaGACTGAGAGAGCAGAAAAGACTGTTATGATACACACTGCGACT +
Preference number: 6 (lower is better)
Translates to: NSWIIDSLDLPTPTH*TERAEKTVMIHTAT
Trigger: AGTCGCAGTGTGTATCATAACAGTCTTTTCTGCTCTCTCAGTCAAATGGGTTGGTGTTGGCAAGTCAAGAGAGTCGATGATCCAGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555674.1
CDS CCA 72 bp GCATTTCAGTGTGTGAAGATAAGAAAGTTCTGGAGGTaGATGGTGGTGATGGATGCAAAACACATTCCTCGG +
Preference number: 6 (lower is better)
Translates to: AFQCVKIRKFWR*MVVMDAKHIPR
Trigger: CCGAGGAATGTGTTTTGCATCCATCACCACCATCCACCTCCAGAACTTTCTTATCTTCACACACTGAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557582.5
CDS CAA 72 bp ATAGCAGCATTATTCAGAGTAGCCAAGAGCTGTCCATaGACAGATGAATGGGTAAGCAGAACACGGTCTACC +
Preference number: 6 (lower is better)
Translates to: IAALFRVAKSCP*TDEWVSRTRST
Trigger: GGTAGACCGTGTTCTGCTTACCCATTCATCTGTCAATGGACAGCTCTTGGCTACTCTGAATAATGCTGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557582.5
CDS CCA 72 bp AGAGGCCCATCAGTAAACAAAAGGAGAAATCAACTGTaGTCCATCCAGACAGTGGAGTATTATTCAACACTG +
Preference number: 6 (lower is better)
Translates to: RGPSVNKRRNQL*SIQTVEYYSTL
Trigger: CAGTGTTGAATAATACTCCACTGTCTGGATGGACCACAGTTGATTTCTCCTTTTGTTTACTGATGGGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557582.5
CDS CAA 72 bp ATCATCGACTCTCTTGACTTGCCAACACCAACCCATTaGACTGAGAGAGCAGAAAAGACTGTTATGATACAC +
Preference number: 6 (lower is better)
Translates to: IIDSLDLPTPTH*TERAEKTVMIH
Trigger: GTGTATCATAACAGTCTTTTCTGCTCTCTCAGTCAAATGGGTTGGTGTTGGCAAGTCAAGAGAGTCGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555674.1
CDS CCA 72 bp ATTTCAGCATTTCAGTGTGTGAAGATAAGAAAGTTCTaGAGGTGGATGGTGGTGATGGATGCAAAACACATT +
Preference number: 6 (lower is better)
Translates to: ISAFQCVKIRKF*RWMVVMDAKHI
Trigger: AATGTGTTTTGCATCCATCACCACCATCCACCTCCAGAACTTTCTTATCTTCACACACTGAAATGCTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557582.5
CDS TCA 72 bp TGTGGTCCATCCAGACAGTGGAGTATTATTCAACACTaGAAAGAAATGAGCTTTCAAGCCATGAAAAGACAT +
Preference number: 6 (lower is better)
Translates to: CGPSRQWSIIQH*KEMSFQAMKRH
Trigger: ATGTCTTTTCATGGCTTGAAAGCTCATTTCTTTTCAGTGTTGAATAATACTCCACTGTCTGGATGGACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557582.5
CDS TCA 72 bp TTACAAACGGACACAAACAGGATGATTCCGCTTATATaGAGTCCCTGGAAAAGTGAAATTCATAGAGATAGA +
Preference number: 6 (lower is better)
Translates to: LQTDTNRMIPLI*SPWKSEIHRDR
Trigger: TCTATCTCTATGAATTTCACTTTTCCAGGGACTTCATATAAGCGGAATCATCCTGTTTGTGTCCGTTTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557582.5