RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADRA1A (Homo sapiens)

Ensembl gene IDs: ENSG00000120907

Ensembl transcript IDs: ENST00000276393.8, ENST00000354550.4, ENST00000380572.3, ENST00000380573.4, ENST00000380582.7, ENST00000380586.5, ENST00000518621.1, ENST00000518810.1, ENST00000519096.5, ENST00000519229.5, ENST00000521711.5

Found 1068 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTaGCTGATGAGTTGGGTCTACCACCCACCCCATTCCCAGCAGGTC +
Preference number: 1 (lower is better)
Translates to: WLVVRHPPSSLCPTR*LMSWVYHPPHSQQV
Trigger: GACCTGCTGGGAATGGGGTGGGTGGTAGACCCAACTCATCAGGCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR CCA 90 bp GCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTaGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGT +
Preference number: 1 (lower is better)
Translates to: APGVDSKDSGSQDQW*VSCSPSLGSKDNSR
Trigger: ACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR CCA 90 bp TGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTaGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGT +
Preference number: 1 (lower is better)
Translates to: WAPGVDSKDSGSQDQ*WVSCSPSLGSKDNS
Trigger: ACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR CCA 90 bp ACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTaGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGT +
Preference number: 1 (lower is better)
Translates to: TVGRRTSGGFHAPLP*AVRTTVVDGKLASC
Trigger: ACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
3UTR GCA 90 bp ATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTaGCCTACCCGCTGCCTGATGAGTTGGGTCTACCACCCACCCCAT +
Preference number: 1 (lower is better)
Translates to: IILNWLVVRHPPSSL*PTRCLMSWVYHPPH
Trigger: ATGGGGTGGGTGGTAGACCCAACTCATCAGGCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAGAATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR GCA 90 bp GTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATaGTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAA +
Preference number: 1 (lower is better)
Translates to: VDSKDSGSQDQWWVS*SPSLGSKDNSRGRE
Trigger: TTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR CCA 90 bp TTGGGTCTACCACCCACCCCATTCCCAGCAGGTCCCCTCTTTGATTaGTCCTGTCTTGTCCTCCAAGAAGAGCTGGCCTTCCGAGAAGGA +
Preference number: 1 (lower is better)
Translates to: LGLPPTPFPAGPLFD*SCLVLQEELAFREG
Trigger: TCCTTCTCGGAAGGCCAGCTCTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGGTGGGTGGTAGACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR CCA 90 bp CAGGTCCCCTCTTTGATTGGTCCTGTCTTGTCCTCCAAGAAGAGCTaGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCC +
Preference number: 1 (lower is better)
Translates to: QVPSLIGPVLSSKKS*PSEKEVGWVPKIIP
Trigger: GGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCAGCTCTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR CCA 90 bp GAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTaGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGC +
Preference number: 1 (lower is better)
Translates to: ESISCREMLFRIILN*LVVRHPPSSLCPTR
Trigger: GCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR GCA 90 bp GATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTaGTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGTC +
Preference number: 1 (lower is better)
Translates to: DNCHRRMCSPVVLKP*SMVYYVPSRGPSPV
Trigger: GACTGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
3UTR GCA 90 bp TGGTTTTCGTTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTaGAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTGTG +
Preference number: 1 (lower is better)
Translates to: WFSLKWAQSDQESIS*REMLFRIILNWLVV
Trigger: CACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAACGAAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR CCA 90 bp CTATGGGAAGGTAAGATAACTGCCACAGAAGAATGTGTAGTCCAGTaGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAG +
Preference number: 1 (lower is better)
Translates to: LWEGKITATEECVVQ*CLNRAPWCTMYPLE
Trigger: CTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTTACCTTCCCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
3UTR CCA 90 bp CTCAGGTCTATTGTTTTCTCTTGGGAAAAGCCATACCACCCTGGTTaGTTCTTTCAACCCTCTCCTGACCCAAGGATAGAGAACACTACA +
Preference number: 1 (lower is better)
Translates to: LRSIVFSWEKPYHPG*FFQPSPDPRIENTT
Trigger: TGTAGTGTTCTCTATCCTTGGGTCAGGAGAGGGTTGAAAGAACCAACCAGGGTGGTATGGCTTTTCCCAAGAGAAAACAATAGACCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR TCA 90 bp CCTCTCATTTCCTCATTAGCCAGGCTGGTCACATTCTGCTCCCTGTaGGATGATGCTTTTGGTCTTCTTTCTCCAAACACTGAAAGAACT +
Preference number: 1 (lower is better)
Translates to: PLISSLARLVTFCSL*DDAFGLLSPNTERT
Trigger: AGTTCTTTCAGTGTTTGGAGAAAGAAGACCAAAAGCATCATCTCACAGGGAGCAGAATGTGACCAGCCTGGCTAATGAGGAAATGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519229.5
3UTR TCA 90 bp AAAGTGCAGTCAAAGGTAAACCTCACTGCCAAGTTTCCCTCAAGCTaGGAAATTGGATGTATCAGAAAGGGTGGAGTTTCAGGACTTGCT +
Preference number: 1 (lower is better)
Translates to: KVQSKVNLTAKFPSS*EIGCIRKGGVSGLA
Trigger: AGCAAGTCCTGAAACTCCACCCTTTCTGATACATCCAATTTCTCAGCTTGAGGGAAACTTGGCAGTGAGGTTTACCTTTGACTGCACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR CCA 90 bp TCTCACTACCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTaGGATATCCAGTTTTCACTTAGGAACAAGCGATGTCACATAATA +
Preference number: 1 (lower is better)
Translates to: SHYQVLTMKPTGPEG*DIQFSLRNKRCHII
Trigger: TATTATGTGACATCGCTTGTTCCTAAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGGTAGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
3UTR CCA 90 bp TGCCAAGTTTCCCTCAAGCTGAGAAATTGGATGTATCAGAAAGGGTaGAGTTTCAGGACTTGCTCTAAAAATAATGTGTCTGGATCTCGG +
Preference number: 1 (lower is better)
Translates to: CQVSLKLRNWMYQKG*SFRTCSKNNVSGSR
Trigger: CCGAGATCCAGACACATTATTTTTAGAGCAAGTCCTGAAACTCCACCCTTTCTGATACATCCAATTTCTCAGCTTGAGGGAAACTTGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR GCA 90 bp TACTTGTTTTCTTTGATTGTCTCATCCTCCAGAGCACAGATGATATaGTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTG +
Preference number: 1 (lower is better)
Translates to: YLFSLIVSSSRAQMI*FPMVGDQVISLTVV
Trigger: CACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATATCATCTGTGCTCTGGAGGATGAGACAATCAAAGAAAACAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380572.3
3UTR CCA 90 bp GTCAAAGGTAAACCTCACTGCCAAGTTTCCCTCAAGCTGAGAAATTaGATGTATCAGAAAGGGTGGAGTTTCAGGACTTGCTCTAAAAAT +
Preference number: 1 (lower is better)
Translates to: VKGKPHCQVSLKLRN*MYQKGWSFRTCSKN
Trigger: ATTTTTAGAGCAAGTCCTGAAACTCCACCCTTTCTGATACATCCAATTTCTCAGCTTGAGGGAAACTTGGCAGTGAGGTTTACCTTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR-3UTR CCA 90 bp AAGGCTCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGGTCGCAGGACCAGTaGTGGGTTTCATGCTCCCCT +
Preference number: 2 (lower is better)
Translates to: KAPGLLGWIPKTVGRRTSGSQDQ*WVSCSP
Trigger: AGGGGAGCATGAAACCCACCACTGGTCCTGCGACCC...ACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR CAA 90 bp GACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTaGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATG +
Preference number: 2 (lower is better)
Translates to: DSGSQDQWWVSCSPS*GSKDNSRGREAGFM
Trigger: CATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
3UTR-3UTR CCA 90 bp GTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGGGATTCCAAAGACAGTaGGTCGCAGGACCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: VGRRTSGGFHAPLPWAVRGFQRQ*VAGPVV
Trigger: CACCACTGGTCCTGCGACCCACTGTCTTTGGAATCC...CCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR-3UTR CCA 90 bp TTAGCTGGGCCTGGTGGCGTCGGCCTGGTGGCACATCCCTGTAGTCCCAGCTGCTTCACTTCTCAGCTGTaGATAGCACACTCATCCCTG +
Preference number: 2 (lower is better)
Translates to: LAGPGGVGLVAHPCSPSCFTSQL*IAHSSL
Trigger: CAGGGATGAGTGTGCTATCCACAGCTGAGAAGTGAA...GCAGCTGGGACTACAGGGATGTGCCACCAGGCCGACGCCACCAGGCCCAGCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519096.5
3UTR-3UTR CCA 90 bp GACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTCATGCTCCCCTTCCTTaGGCAGTAAGGACAACAGTC +
Preference number: 2 (lower is better)
Translates to: DSGSQDQWWVSCSPSLGSHAPLP*AVRTTV
Trigger: GACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATG...ACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR-3UTR CCA 90 bp GTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAATTAGCTGGGCCTGGTaGCGTCGGCCTGGTGGCACA +
Preference number: 2 (lower is better)
Translates to: VLKPCSMVYYVPSRGPSPISWAW*RRPGGT
Trigger: TGTGCCACCAGGCCGACGCCACCAGGCCCAGCTAAT...TGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519096.5
3UTR CAA 90 bp ATGAGTTGGGTCTACCACCCACCCCATTCCCAGCAGGTCCCCTCTTaGATTGGTCCTGTCTTGTCCTCCAAGAAGAGCTGGCCTTCCGAG +
Preference number: 2 (lower is better)
Translates to: MSWVYHPPHSQQVPS*IGPVLSSKKSWPSE
Trigger: CTCGGAAGGCCAGCTCTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGGTGGGTGGTAGACCCAACTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR-3UTR CCA 90 bp AGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCCCTGGGCTCCTGGGGTaGATTCCAAAGACAGTGGGT +
Preference number: 2 (lower is better)
Translates to: RTSGGFHAPLPWAVRTTVPGLLG*IPKTVG
Trigger: ACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGG...GACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR-3UTR CCA 90 bp CTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGCCTTCCGAGAAGGAAGTaGGGTGGGTACCTAAGATTA +
Preference number: 2 (lower is better)
Translates to: LNWLVVRHPPSSLCPTRCLPRRK*GGYLRL
Trigger: TAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAG...GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR CAA 90 bp AGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTaGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGC +
Preference number: 2 (lower is better)
Translates to: SISCREMLFRIILNW*VVRHPPSSLCPTRC
Trigger: GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR-3UTR TCA 90 bp CCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCGAGGCAGGCAGATCATaGGGTCAAGAGATCGAGATC +
Preference number: 2 (lower is better)
Translates to: PVVLKPCSMVYYVPSRGPEAGRS*GQEIEI
Trigger: GATCTCGATCTCTTGACCTCATGATCTGCCTGCCTC...GGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
3UTR-3UTR CCA 90 bp TCTGAGTGGTTGGGGTCTTACCCCACTCCCAACATCCGTCCAGCCCTGCTGTTTTGGGCTGGGTGTCTATaGGAAGGTAAGATAACTGCC +
Preference number: 2 (lower is better)
Translates to: SEWLGSYPTPNIRPALLFWAGCL*EGKITA
Trigger: GGCAGTTATCTTACCTTCCCATAGACACCCAGCCCA...AAACAGCAGGGCTGGACGGATGTTGGGAGTGGGGTAAGACCCCAACCACTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
3UTR-3UTR TCA 90 bp GCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCAACATTCTGCTCCCTGTaGGATGATGCTTTTGGTCTT +
Preference number: 2 (lower is better)
Translates to: APLPWAVRTTVVDGKLASTFCSL*DDAFGL
Trigger: AAGACCAAAAGCATCATCTCACAGGGAGCAGAATGT...TGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519229.5
3UTR-3UTR CCA 90 bp AAGATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCAGTGGCGTCGGCCTGGTaGCACATCCCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: KITATEECVVQWCLNRAPVASAW*HIPVVP
Trigger: TGGGACTACAGGGATGTGCCACCAGGCCGACGCCAC...TGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519096.5
3UTR-3UTR TCA 90 bp AGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCGAGGCAGGCAGATCATaGGGTCAAGAGATCGAGATC +
Preference number: 2 (lower is better)
Translates to: SPVVLKPCSMVYYVPSRGEAGRS*GQEIEI
Trigger: GATCTCGATCTCTTGACCTCATGATCTGCCTGCCTC...GCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
3UTR-3UTR GCA 90 bp GAGGAGCAGCATCCATTCAAAGTGCAGTCAAAGGTAAACCTCACTGCCAAGTTTCTGTGCCCTACCCGCTaGCTGATGAGTTGGGTCTAC +
Preference number: 2 (lower is better)
Translates to: EEQHPFKVQSKVNLTAKFLCPTR*LMSWVY
Trigger: GTAGACCCAACTCATCAGGCAGCGGGTAGGGCACAG...AAACTTGGCAGTGAGGTTTACCTTTGACTGCACTTTGAATGGATGCTGCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR-3UTR GCA 90 bp CCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCACATCCGTCCAGCCCTaGTGTTTTTCTTTCTTTTGC +
Preference number: 2 (lower is better)
Translates to: PVVLKPCSMVYYVPSRGPTSVQP*CFSFFC
Trigger: GCAAAAGAAAGAAAAACAGCAGGGCTGGACGGATGT...GGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
3UTR-3UTR CCA 90 bp CAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCTCCTCCAAGAAGAGCTaGCCTTCCGAGAAGGAAGTG +
Preference number: 2 (lower is better)
Translates to: QGNAVPYHSELVGCETPSSSKKS*PSEKEV
Trigger: CACTTCCTTCTCGGAAGGCCAGCTCTTCTTGGAGGA...GGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR-3UTR CCA 90 bp TTGTTTTCTCTTGGGAAAAGCCATACCACCCTGGTTGGTTCTTTCAACCCTCTCCGCTGCCTGATGAGTTaGGTCTACCACCCACCCCAT +
Preference number: 2 (lower is better)
Translates to: LFSLGKSHTTLVGSFNPLRCLMS*VYHPPH
Trigger: ATGGGGTGGGTGGTAGACCCAACTCATCAGGCAGCG...GAGAGGGTTGAAAGAACCAACCAGGGTGGTATGGCTTTTCCCAAGAGAAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR-3UTR CCA 90 bp GTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCGAATGTGTAGTCCAGTaGTGCTTAAACCGTGCTCCA +
Preference number: 2 (lower is better)
Translates to: VQWCLNRAPWCTMYPLEAECVVQ*CLNRAP
Trigger: TGGAGCACGGTTTAAGCACCACTGGACTACACATTC...GGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
3UTR-3UTR CCA 90 bp GGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACACTCTTCTTTTTAATTTaGGCCAACACCAATCCGTTC +
Preference number: 2 (lower is better)
Translates to: GRRTSGGFHAPLPWAVRTLFFLI*ANTNPF
Trigger: GAACGGATTGGTGTTGGCCCAAATTAAAAAGAAGAG...TGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519229.5
3UTR-3UTR GCA 90 bp GAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTCTGTGCCCTACCCGCTaGCTGATGAGTTGGGTCTAC +
Preference number: 2 (lower is better)
Translates to: ESISCREMLFRIILNWLVLCPTR*LMSWVY
Trigger: GTAGACCCAACTCATCAGGCAGCGGGTAGGGCACAG...AACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR-3UTR GCA 90 bp GGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCAACATGTTGGATTTGTaGCTTAGTCAGATGGATGCT +
Preference number: 2 (lower is better)
Translates to: GFQRQWVAGPVVGFMLPFNMLDL*LSQMDA
Trigger: AGCATCCATCTGACTAAGGCACAAATCCAACATGTT...GAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR-3UTR GCA 90 bp GTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAACATCCGTCCAGCCCTaGTGTTTTTCTTTCTTTTGC +
Preference number: 2 (lower is better)
Translates to: VLKPCSMVYYVPSRGPSPTSVQP*CFSFFC
Trigger: GCAAAAGAAAGAAAAACAGCAGGGCTGGACGGATGT...TGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
3UTR-3UTR GCA 90 bp TGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGGTGGTGCTTAAACCGTaGTCCATGGTGTACTATGTA +
Preference number: 2 (lower is better)
Translates to: CLNRAPWCTMYPLEAPHQVVLKP*SMVYYV
Trigger: TACATAGTACACCATGGAGCACGGTTTAAGCACCAC...CTGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
3UTR-3UTR CCA 90 bp TTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCGAGAAGGAAGTGGGGTaGGTACCTAAGATTATTCCC +
Preference number: 2 (lower is better)
Translates to: FRIILNWLVVRHPPSSLCEKEVG*VPKIIP
Trigger: GGGAATAATCTTAGGTACCCACCCCACTTCCTTCTC...GCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR-3UTR CCA 90 bp CAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGCGCTGCCTGATGAGTTaGGTCTACCACCCACCCCAT +
Preference number: 2 (lower is better)
Translates to: QESISCREMLFRIILNWLRCLMS*VYHPPH
Trigger: ATGGGGTGGGTGGTAGACCCAACTCATCAGGCAGCG...CAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR-3UTR CCA 90 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCGGTCCCCTCTTTGATTaGTCCTGTCTTGTCCTCCAA +
Preference number: 2 (lower is better)
Translates to: LKWAQSDQESISCREMLFGPLFD*SCLVLQ
Trigger: TTGGAGGACAAGACAGGACCAATCAAAGAGGGGACC...GAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR-3UTR CCA 90 bp GTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCTTAAACCGTGCTCCATaGTGTACTATGTACCCTCTA +
Preference number: 2 (lower is better)
Translates to: VQWCLNRAPWCTMYPLEALNRAP*CTMYPL
Trigger: TAGAGGGTACATAGTACACCATGGAGCACGGTTTAA...GGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
3UTR-3UTR TCA 90 bp TTGTTTTCTCTTGGGAAAAGCCATACCACCCTGGTTGGTTCTTTCAACCCTCTCCATTCCAAGACATCATaGGTGCCCCTCACTCTCATC +
Preference number: 2 (lower is better)
Translates to: LFSLGKSHTTLVGSFNPLHSKTS*VPLTLI
Trigger: GATGAGAGTGAGGGGCACTCATGATGTCTTGGAATG...GAGAGGGTTGAAAGAACCAACCAGGGTGGTATGGCTTTTCCCAAGAGAAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR-3UTR CCA 90 bp CACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATAATACAAAAATTAGCTaGGCCTGGTGGCGTCGGCCT +
Preference number: 2 (lower is better)
Translates to: HRRMCSPVVLKPCSMVYYNTKIS*AWWRRP
Trigger: AGGCCGACGCCACCAGGCCCAGCTAATTTTTGTATT...ATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519096.5
3UTR-3UTR TCA 90 bp GTGAACAGCCTCTATCTTTGCAAGAAATTAACAGCCACACCAACCTCTTGCTCTCTTTCAACCCTCTCCTaGCCCAAGGATAGAGAACAC +
Preference number: 2 (lower is better)
Translates to: VNSLYLCKKLTATPTSCSLSTLS*PKDREH
Trigger: GTGTTCTCTATCCTTGGGTCAGGAGAGGGTTGAAAG...AGAGCAAGAGGTTGGTGTGGCTGTTAATTTCTTGCAAAGATAGAGGCTGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR-3UTR GCA 90 bp AGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCTTTCCTCTTTCCCTTTaGATTCATGATCATTCCTTA +
Preference number: 2 (lower is better)
Translates to: RTSGGFHAPLPWAVRTTVFPLSL*IHDHSL
Trigger: TAAGGAATGATCATGAATGCAAAGGGAAAGAGGAAA...GACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
3UTR-3UTR CCA 90 bp CACGTGGCTGATGATTCTCAATTAACTTTTAAGAATGAAATGGGGGAGGGAGGTCATGCTCCCCTTCCTTaGGCAGTAAGGACAACAGTC +
Preference number: 2 (lower is better)
Translates to: HVADDSQLTFKNEMGEGGHAPLP*AVRTTV
Trigger: GACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATG...ACCTCCCTCCCCCATTTCATTCTTAAAAGTTAATTGAGAATCATCAGCCACGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
3UTR-3UTR CCA 90 bp GTGGCTGATGATTCTCAATTAACTTTTAAGAATGAAATGGGGGAGGGAGGTTGTGGATTCCAAAGACAGTaGGTCGCAGGACCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: VADDSQLTFKNEMGEGGCGFQRQ*VAGPVV
Trigger: CACCACTGGTCCTGCGACCCACTGTCTTTGGAATCC...ACAACCTCCCTCCCCCATTTCATTCTTAAAAGTTAATTGAGAATCATCAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
3UTR CAA 90 bp GAACACTACATTCCAAGACATCATGAGTGCCCCTCACTCTCATCTTaGGGAAATGAGGAGCAGCATCCATTCAAAGTGCAGTCAAAGGTA +
Preference number: 2 (lower is better)
Translates to: EHYIPRHHECPSLSS*GNEEQHPFKVQSKV
Trigger: TACCTTTGACTGCACTTTGAATGGATGCTGCTCCTCATTTCCCAAAGATGAGAGTGAGGGGCACTCATGATGTCTTGGAATGTAGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR-3UTR CCA 90 bp CAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGCTTCCGAGAAGGAAGTaGGGTGGGTACCTAAGATTA +
Preference number: 2 (lower is better)
Translates to: QESISCREMLFRIILNWLLPRRK*GGYLRL
Trigger: TAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAG...CAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR-3UTR CCA 90 bp ATGCTCAGGTCTATTGTTTTCTCTTGGGAAAAGCCATACCACCCTGGTTGGTTCCGTATCATTCTGAACTaGTTGGTTGTGAGACACCCT +
Preference number: 2 (lower is better)
Translates to: MLRSIVFSWEKPYHPGWFRIILN*LVVRHP
Trigger: AGGGTGTCTCACAACCAACCAGTTCAGAATGATACG...GAACCAACCAGGGTGGTATGGCTTTTCCCAAGAGAAAACAATAGACCTGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR-3UTR CCA 90 bp ATGATGCTCAGGTCTATTGTTTTCTCTTGGGAAAAGCCATACCACCCTGGTTGGTGGTTTTCGTTGAAGTaGGCACAGAGTGACCAAGAA +
Preference number: 2 (lower is better)
Translates to: MMLRSIVFSWEKPYHPGWWFSLK*AQSDQE
Trigger: TTCTTGGTCACTCTGTGCCCACTTCAACGAAAACCA...CCAACCAGGGTGGTATGGCTTTTCCCAAGAGAAAACAATAGACCTGAGCATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR-3UTR CCA 90 bp ACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCATCGCAGGACCAGTGGTaGGTTTCATGCTCCCCTTCC +
Preference number: 2 (lower is better)
Translates to: TCWICALVRWMLDKEVNPSQDQW*VSCSPS
Trigger: GGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGA...TGGATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR-3UTR CCA 90 bp GTAACAGTAACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAATCGCAGGACCAGTGGTaGGTTTCATGCTCCCCTTCC +
Preference number: 2 (lower is better)
Translates to: VTVTCWICALVRWMLDKESQDQW*VSCSPS
Trigger: GGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGA...TTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGTTACTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR-3UTR CCA 90 bp TGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCAAGTGTCGGATTCCAAAGACAGTaGGTCGCAGGACCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: WICALVRWMLDKEVNPSVGFQRQ*VAGPVV
Trigger: CACCACTGGTCCTGCGACCCACTGTCTTTGGAATCC...GACACTTGGATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR-3UTR GCA 90 bp ACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCACAGTGGTGGGTTTCATaGTCCCCTTCCTTGGGCAGT +
Preference number: 2 (lower is better)
Translates to: TCWICALVRWMLDKEVNPQWWVS*SPSLGS
Trigger: ACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTG...TGGATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR-3UTR CCA 90 bp GTGAACAGCCTCTATCTTTGCAAGAAATTAACAGCCACACCAACCTCTTGCTCTTTCTGTTTCCCATGGTaGTTTTCGTTGAAGTGGGCA +
Preference number: 2 (lower is better)
Translates to: VNSLYLCKKLTATPTSCSFCFPW*FSLKWA
Trigger: TGCCCACTTCAACGAAAACCACCATGGGAAACAGAA...AGAGCAAGAGGTTGGTGTGGCTGTTAATTTCTTGCAAAGATAGAGGCTGTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR-3UTR TCA 90 bp AATGAGGAGCAGCATCCATTCAAAGTGCAGTCAAAGGTAAACCTCACTGCCAAGCTTTTGGATTGTGCATaGAATTCTGTTTCCCATGGT +
Preference number: 2 (lower is better)
Translates to: NEEQHPFKVQSKVNLTAKLLDCA*NSVSHG
Trigger: ACCATGGGAAACAGAATTTCATGCACAATCCAAAAG...CTTGGCAGTGAGGTTTACCTTTGACTGCACTTTGAATGGATGCTGCTCCTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR-3UTR GCA 90 bp TCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGCAGCCAATTAACAGTTCCTaGCAGAAGAATATGTATCTA +
Preference number: 2 (lower is better)
Translates to: SNGRRPGYLSHCSARWEQPINSS*QKNMYL
Trigger: TAGATACATATTCTTCTGGCAGGAACTGTTAATTGG...CTGCTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
3UTR-3UTR CCA 90 bp ACGGGAAGCTGGCTTCATGTCATGGGTGTGTGTCCCTTTAAAACACAAGGTAGATGTGCCTTAGTCAGATaGATGCTTGATAAAGAAGTA +
Preference number: 2 (lower is better)
Translates to: TGSWLHVMGVCPFKTQGRCALVR*MLDKEV
Trigger: TACTTCTTTATCAAGCATCCATCTGACTAAGGCACA...TCTACCTTGTGTTTTAAAGGGACACACACCCATGACATGAAGCCAGCTTCCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519229.5
3UTR-3UTR GCA 90 bp ATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATCAAGAAAGCATTAGCTaGAGGGAAATGCTGTTCCGT +
Preference number: 2 (lower is better)
Translates to: IPSLPSRNSSKLRVCAQNQESIS*REMLFR
Trigger: ACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTG...ATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR-3UTR TCA 90 bp CCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCATTTTTTGTAAGCCATGTTaGAATGGCTGTGCAGTAAGT +
Preference number: 2 (lower is better)
Translates to: PALDSSLVIHQYCLKLSIFCKPC*NGCAVS
Trigger: ACTTACTGCACAGCCATTTCAACATGGCTTACAAAA...AATGCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR-3UTR CCA 90 bp GTAACAGTAACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAATTCACTTCTCAGCTGTaGATAGCACACTCATCCCTG +
Preference number: 2 (lower is better)
Translates to: VTVTCWICALVRWMLDKEFTSQL*IAHSSL
Trigger: CAGGGATGAGTGTGCTATCCACAGCTGAGAAGTGAA...TTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGTTACTGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521711.5
3UTR CAA 90 bp GAACAGCCTCTATCTTTGCAAGAAATTAACAGCCACACCAACCTCTaGCTCTTTAAAGATATTAGAGAGAAAGCCTATCATCATCTGATC +
Preference number: 2 (lower is better)
Translates to: EQPLSLQEINSHTNL*LFKDIREKAYHHLI
Trigger: GATCAGATGATGATAGGCTTTCTCTCTAATATCTTTAAAGAGCAAGAGGTTGGTGTGGCTGTTAATTTCTTGCAAAGATAGAGGCTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR-3UTR CCA 90 bp AATAAAATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTAAATTCTGTTTCCCATaGTGGTTTTCGTTGAAGTGG +
Preference number: 2 (lower is better)
Translates to: NKIPSLPSRNSSKLRVCAKFCFP*WFSLKW
Trigger: CCACTTCAACGAAAACCACCATGGGAAACAGAATTT...AGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGATTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR GCA 72 bp GTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTaGCTGATGAGTTGGGTCTACCACCCACCCCATTCC +
Preference number: 3 (lower is better)
Translates to: VRHPPSSLCPTR*LMSWVYHPPHS
Trigger: GGAATGGGGTGGGTGGTAGACCCAACTCATCAGGCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR CCA 72 bp AGGCTCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTaGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCC +
Preference number: 3 (lower is better)
Translates to: RLLGSWGGFQRQ*VAGPVVGFMLP
Trigger: GGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR CCA 72 bp CGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTaGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: RRTSGGFHAPLP*AVRTTVVDGKL
Trigger: CAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR CCA 72 bp CCACCCACCCCATTCCCAGCAGGTCCCCTCTTTGATTaGTCCTGTCTTGTCCTCCAAGAAGAGCTGGCCTTC +
Preference number: 3 (lower is better)
Translates to: PPTPFPAGPLFD*SCLVLQEELAF
Trigger: GAAGGCCAGCTCTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGGTGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR CCA 72 bp GGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTaGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAG +
Preference number: 3 (lower is better)
Translates to: GVDSKDSGSQDQ*WVSCSPSLGSK
Trigger: CTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR-3UTR CAA 90 bp CTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGCTTGATTGGTCCTGTCTaGTCCTCCAAGAAGAGCTGG +
Preference number: 3 (lower is better)
Translates to: LNWLVVRHPPSSLCPTRCLIGPV*SSKKSW
Trigger: CCAGCTCTTCTTGGAGGACAAGACAGGACCAATCAA...GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR-3UTR CAA 90 bp GTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGGTGGTTCTGAGTGGTaGGGGTCTTACCCCACTCCC +
Preference number: 3 (lower is better)
Translates to: VLKPCSMVYYVPSRGPSPGGSEW*GSYPTP
Trigger: GGGAGTGGGGTAAGACCCCAACCACTCAGAACCACC...TGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
3UTR CCA 72 bp GTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTaGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGAC +
Preference number: 3 (lower is better)
Translates to: VDSKDSGSQDQW*VSCSPSLGSKD
Trigger: GTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR GCA 72 bp AAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATaGTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGT +
Preference number: 3 (lower is better)
Translates to: KDSGSQDQWWVS*SPSLGSKDNSR
Trigger: ACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR CCA 72 bp GACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATaGGTGTGTGTCCCTGATTTTCCTGGGTCAGTCCCT +
Preference number: 3 (lower is better)
Translates to: DNSRGREAGFMS*VCVPDFPGSVP
Trigger: AGGGACTGACCCAGGAAAATCAGGGACACACACCCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521711.5
3UTR CCA 72 bp TCTTTGATTGGTCCTGTCTTGTCCTCCAAGAAGAGCTaGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAG +
Preference number: 3 (lower is better)
Translates to: SLIGPVLSSKKS*PSEKEVGWVPK
Trigger: CTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCAGCTCTTCTTGGAGGACAAGACAGGACCAATCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR CCA 72 bp AGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTaGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGC +
Preference number: 3 (lower is better)
Translates to: SCREMLFRIILN*LVVRHPPSSLC
Trigger: GCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR-3UTR CAA 90 bp CAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGCCGCTGCCTGATGAGTaGGGTCTACCACCCACCCCA +
Preference number: 3 (lower is better)
Translates to: QESISCREMLFRIILNWLPLPDE*GLPPTP
Trigger: TGGGGTGGGTGGTAGACCCAACTCATCAGGCAGCGG...CAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR-3UTR CAA 90 bp GCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCAAATGGGGGAGGGAGGTaGTATGAAACTGATTTACAA +
Preference number: 3 (lower is better)
Translates to: APLPWAVRTTVVDGKLASNGGGR*YETDLQ
Trigger: TTGTAAATCAGTTTCATACAACCTCCCTCCCCCATT...TGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521711.5
3UTR-3UTR CAA 90 bp GTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGTGTGAGATGATGCTTTaGGTCTTCTTTCTCCAAACA +
Preference number: 3 (lower is better)
Translates to: VGRRTSGGFHAPLPWAVRCEMML*VFFLQT
Trigger: TGTTTGGAGAAAGAAGACCAAAAGCATCATCTCACA...CCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519229.5
3UTR-3UTR CAA 90 bp TTCTGTTTCCCATGGTGGTTTTCGTTGAAGTGGGCACAGAGTGACCAAGAAAGCCAGCAGGTCCCCTCTTaGATTGGTCCTGTCTTGTCC +
Preference number: 3 (lower is better)
Translates to: FCFPWWFSLKWAQSDQESQQVPS*IGPVLS
Trigger: GGACAAGACAGGACCAATCAAAGAGGGGACCTGCTG...GCTTTCTTGGTCACTCTGTGCCCACTTCAACGAAAACCACCATGGGAAACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR-3UTR CAA 90 bp GGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAAGTAACAGTAACATGTaGGATTTGTGCCTTAGTCAG +
Preference number: 3 (lower is better)
Translates to: GRRTSGGFHAPLPWAVRTSNSNM*DLCLSQ
Trigger: CTGACTAAGGCACAAATCCAACATGTTACTGTTACT...TGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR GCA 72 bp CACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTaGTCCATGGTGTACTATGTACCCTCTAGAGGCCCC +
Preference number: 3 (lower is better)
Translates to: HRRMCSPVVLKP*SMVYYVPSRGP
Trigger: GGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
3UTR-3UTR CAA 90 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCATCATTCTGAACTGGTaGGTTGTGAGACACCCTCCC +
Preference number: 3 (lower is better)
Translates to: LKWAQSDQESISCREMLFIILNW*VVRHPP
Trigger: GGGAGGGTGTCTCACAACCAACCAGTTCAGAATGAT...GAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR-3UTR CAA 90 bp TTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGACTCTTCTTTTTAATTaGGGCCAACACCAATCCGTT +
Preference number: 3 (lower is better)
Translates to: FHAPLPWAVRTTVVDGKLTLLFN*GQHQSV
Trigger: AACGGATTGGTGTTGGCCCAAATTAAAAAGAAGAGT...CAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519229.5
3UTR-3UTR CAA 90 bp GAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTTTGATTGGTCCTGTCTaGTCCTCCAAGAAGAGCTGG +
Preference number: 3 (lower is better)
Translates to: ESISCREMLFRIILNWLVLIGPV*SSKKSW
Trigger: CCAGCTCTTCTTGGAGGACAAGACAGGACCAATCAA...AACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR TCA 72 bp TCCTCATTAGCCAGGCTGGTCACATTCTGCTCCCTGTaGGATGATGCTTTTGGTCTTCTTTCTCCAAACACT +
Preference number: 3 (lower is better)
Translates to: SSLARLVTFCSL*DDAFGLLSPNT
Trigger: AGTGTTTGGAGAAAGAAGACCAAAAGCATCATCTCACAGGGAGCAGAATGTGACCAGCCTGGCTAATGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519229.5
3UTR GCA 72 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTaGAGGGAAATGCTGTTCCGTATCATTCTGAACTGG +
Preference number: 3 (lower is better)
Translates to: LKWAQSDQESIS*REMLFRIILNW
Trigger: CCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR CCA 72 bp ATTGTTTTCTCTTGGGAAAAGCCATACCACCCTGGTTaGTTCTTTCAACCCTCTCCTGACCCAAGGATAGAG +
Preference number: 3 (lower is better)
Translates to: IVFSWEKPYHPG*FFQPSPDPRIE
Trigger: CTCTATCCTTGGGTCAGGAGAGGGTTGAAAGAACCAACCAGGGTGGTATGGCTTTTCCCAAGAGAAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR CCA 72 bp CAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTaGGATATCCAGTTTTCACTTAGGAACAAGCGATGT +
Preference number: 3 (lower is better)
Translates to: QVLTMKPTGPEG*DIQFSLRNKRC
Trigger: ACATCGCTTGTTCCTAAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
3UTR CCA 72 bp GGTAAGATAACTGCCACAGAAGAATGTGTAGTCCAGTaGTGCTTAAACCGTGCTCCATGGTGTACTATGTAC +
Preference number: 3 (lower is better)
Translates to: GKITATEECVVQ*CLNRAPWCTMY
Trigger: GTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
3UTR CCA 72 bp AAACCTCACTGCCAAGTTTCCCTCAAGCTGAGAAATTaGATGTATCAGAAAGGGTGGAGTTTCAGGACTTGC +
Preference number: 3 (lower is better)
Translates to: KPHCQVSLKLRN*MYQKGWSFRTC
Trigger: GCAAGTCCTGAAACTCCACCCTTTCTGATACATCCAATTTCTCAGCTTGAGGGAAACTTGGCAGTGAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR-3UTR CAA 90 bp CTCTATCTTTGCAAGAAATTAACAGCCACACCAACCTCTTGCTCTTTAAAGATAGCCATACCACCCTGGTaGGTTCTTTCAACCCTCTCC +
Preference number: 3 (lower is better)
Translates to: LYLCKKLTATPTSCSLKIAIPPW*VLSTLS
Trigger: GGAGAGGGTTGAAAGAACCAACCAGGGTGGTATGGC...TATCTTTAAAGAGCAAGAGGTTGGTGTGGCTGTTAATTTCTTGCAAAGATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR-3UTR CAA 90 bp ACTCCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCGTCTATTGTTTTCTCTaGGGAAAAGCCATACCACCC +
Preference number: 3 (lower is better)
Translates to: TPALDSSLVIHQYCLKLSVYCFL*GKAIPP
Trigger: GGGTGGTATGGCTTTTCCCAAGAGAAAACAATAGAC...GCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR GCA 72 bp TCTTTGATTGTCTCATCCTCCAGAGCACAGATGATATaGTTTCCAATGGTAGGAGACCAGGTTATCTCTCTC +
Preference number: 3 (lower is better)
Translates to: SLIVSSSRAQMI*FPMVGDQVISL
Trigger: GAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATATCATCTGTGCTCTGGAGGATGAGACAATCAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
3UTR TCA 72 bp TCAAAGGTAAACCTCACTGCCAAGTTTCCCTCAAGCTaGGAAATTGGATGTATCAGAAAGGGTGGAGTTTCA +
Preference number: 3 (lower is better)
Translates to: SKVNLTAKFPSS*EIGCIRKGGVS
Trigger: TGAAACTCCACCCTTTCTGATACATCCAATTTCTCAGCTTGAGGGAAACTTGGCAGTGAGGTTTACCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR GCA 72 bp AATTGGATGTATCAGAAAGGGTGGAGTTTCAGGACTTaGTCTAAAAATAATGTGTCTGGATCTCGGCCACCA +
Preference number: 3 (lower is better)
Translates to: NWMYQKGWSFRT*SKNNVSGSRPP
Trigger: TGGTGGCCGAGATCCAGACACATTATTTTTAGAGCAAGTCCTGAAACTCCACCCTTTCTGATACATCCAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR GCA 72 bp GCATCCATTCAAAGTGCAGTCAAAGGTAAACCTCACTaGCAAGTTTCCCTCAAGCTGAGAAATTGGATGTAT +
Preference number: 3 (lower is better)
Translates to: ASIQSAVKGKPH*QVSLKLRNWMY
Trigger: ATACATCCAATTTCTCAGCTTGAGGGAAACTTGGCAGTGAGGTTTACCTTTGACTGCACTTTGAATGGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR CCA 72 bp TCCCTCAAGCTGAGAAATTGGATGTATCAGAAAGGGTaGAGTTTCAGGACTTGCTCTAAAAATAATGTGTCT +
Preference number: 3 (lower is better)
Translates to: SLKLRNWMYQKG*SFRTCSKNNVS
Trigger: AGACACATTATTTTTAGAGCAAGTCCTGAAACTCCACCCTTTCTGATACATCCAATTTCTCAGCTTGAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR-3UTR CAA 90 bp TCCTTTTGTAGAGTAAGAATTCTTACTCCAAACCCAATGTGTCCATTTTTCCAAAGTAACATGTTGGATTaGTGCCTTAGTCAGATGGAT +
Preference number: 3 (lower is better)
Translates to: SFCRVRILTPNPMCPFFQSNMLD*CLSQMD
Trigger: ATCCATCTGACTAAGGCACAAATCCAACATGTTACT...TTGGAAAAATGGACACATTGGGTTTGGAGTAAGAATTCTTACTCTACAAAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519229.5
3UTR CCA 72 bp GTTACTGTTTTTCCTGTATCAGTAACAGTAACATGTTaGATTTGTGCCTTAGTCAGATGGATGCTTGATAAA +
Preference number: 3 (lower is better)
Translates to: VTVFPVSVTVTC*ICALVRWMLDK
Trigger: TTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGTTACTGTTACTGATACAGGAAAAACAGTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR GCA 90 bp TCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGGGACCCTCTCCACCTaGCGGGCTGGCCTAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SWAPGVDSKDSGSQDQWWGTLST*RAGLAR
Trigger: CCGGGCTAGGCCAGCCCGGCAGGTGGAGAGGGTCCC...CCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CCA 90 bp TCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGAGCGCGCGCGCGGGTaGGAAACAACCCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SWAPGVDSKDSGSQDQWWERARG*ETTLAS
Trigger: GCTGGCCAGGGTTGTTTCCCACCCGCGCGCGCGCTC...CCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR TCA 90 bp GATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCGGGTTTGGCTGGGGGTaGGAGCGCGCGCGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: DSKDSGSQDQWWVSCSPSGFGWG*ERARGW
Trigger: CCACCCGCGCGCGCGCTCTCACCCCCAGCCAAACCC...GGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR TCA 90 bp TCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGGGGTTTGGCTGGGGGTaGGAGCGCGCGCGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: SWGGFQRQWVAGPVVGFMGFGWG*ERARGW
Trigger: CCACCCGCGCGCGCGCTCTCACCCCCAGCCAAACCC...CATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR GCA 90 bp GACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTTCCTCGGGGGCCGGCTaGCTCCAGCCGAACAGGGGT +
Preference number: 4 (lower is better)
Translates to: DSGSQDQWWVSCSPSLGSSSGAG*LQPNRG
Trigger: ACCCCTGTTCGGCTGGAGGCAGCCGGCCCCCGAGGA...ACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TTAGCTGGGCCTGGTGGCGTCGGCCTGGTGGCACATCCCTGTAGTCCCAGCTGCGGTGGGAAACAACCCTaGCCAGCCCTGGGAACCCTC +
Preference number: 4 (lower is better)
Translates to: LAGPGGVGLVAHPCSPSCGGKQP*PALGTL
Trigger: GAGGGTTCCCAGGGCTGGCCAGGGTTGTTTCCCACC...GCAGCTGGGACTACAGGGATGTGCCACCAGGCCGACGCCACCAGGCCCAGCTAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519096.5
CDS-3UTR CCA 90 bp GACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTTGCCCTTCCACGGCCTaGCTGGGCGGGTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: DSGSQDQWWVSCSPSLGSCPSTA*LGGCRV
Trigger: CACCCTGCACCCGCCCAGCCAGGCCGTGGAAGGGCA...ACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR TCA 90 bp CCCCATTCCCAGCAGGTCCCCTCTTTGATTGGTCCTGTCTTGTCCTCCAAGAAGGGGTTTGGCTGGGGGTaGGAGCGCGCGCGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: PHSQQVPSLIGPVLSSKKGFGWG*ERARGW
Trigger: CCACCCGCGCGCGCGCTCTCACCCCCAGCCAAACCC...CTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp GTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTGGGACCCTCTCCACCTaGCGGGCTGGCCTAGCCCGG +
Preference number: 4 (lower is better)
Translates to: VDSKDSGSQDQWWVSCSPGTLST*RAGLAR
Trigger: CCGGGCTAGGCCAGCCCGGCAGGTGGAGAGGGTCCC...AGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR GCA 90 bp GTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGGGCTGGAGGGAGCCCTaGCAGGTGGGTTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VGRRTSGGFHAPLPWAVRGWREP*QVGLAG
Trigger: CCCAGCCAAACCCACCTGGCAGGGCTCCCTCCAGCC...CCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR GCA 90 bp GGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCTCCTCGGGGGCCGGCTaGCTCCAGCCGAACAGGGGT +
Preference number: 4 (lower is better)
Translates to: GVDSKDSGSQDQWWVSCSSSGAG*LQPNRG
Trigger: ACCCCTGTTCGGCTGGAGGCAGCCGGCCCCCGAGGA...GGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp GACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTCCTGCCAGGTGGGTTTaGCTGGGGGTGAGAGCGCGC +
Preference number: 4 (lower is better)
Translates to: DSGSQDQWWVSCSPSLGSPARWV*LGVRAR
Trigger: GCGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGG...ACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CCA 90 bp CTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGCCCGAGAGAAACACCATaGTCCCAGCCGGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LNWLVVRHPPSSLCPTRCPRETP*SQPGPG
Trigger: GCCCGGCCCCGGCTGGGACCATGGTGTTTCTCTCGG...GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp AAGGCTCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTCCCGGCTCTCCCTCTTaGCCACCACGTAGACGCGGC +
Preference number: 4 (lower is better)
Translates to: KAPGLLGWIPKTVGRRTSPGSPS*PPRRRG
Trigger: GCCGCGTCTACGTGGTGGCCAAGAGGGAGAGCCGGG...ACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGAGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp GCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCCCTTCCACGGCCTaGCTGGGCGGGTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: APGVDSKDSGSQDQWWVSCPSTA*LGGCRV
Trigger: CACCCTGCACCCGCCCAGCCAGGCCGTGGAAGGGCA...TGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR TCA 90 bp GACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTGAAGGAGCCCAGCGCTaGGAAGAGCACGTAGCCCGG +
Preference number: 4 (lower is better)
Translates to: DSGSQDQWWVSCSPSLGSEGAQR*EEHVAR
Trigger: CCGGGCTACGTGCTCTTCTCAGCGCTGGGCTCCTTC...ACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp CTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGCTTGACCGCGTCCACCTaGAGCGCCGCTGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LNWLVVRHPPSSLCPTRCLTAST*SAAAEP
Trigger: TGGCTCAGCAGCGGCGCTTCAGGTGGACGCGGTCAA...GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp AAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCCGCTGGCCATCCCGCTaGCTCCTGCCGGGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: KDSGSQDQWWVSCSPSLGRWPSR*LLPGRF
Trigger: AAAACGCCCCGGCAGGAGGCAGCGGGATGGCCAGCG...GCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp TCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCCGCTGGCCATCCCGCTaGCTCCTGCCGGGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: SCSPSLGSKDNSRGREAGRWPSR*LLPGRF
Trigger: AAAACGCCCCGGCAGGAGGCAGCGGGATGGCCAGCG...GCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATGGCTCCACCTGCCGGGCTaGCCTAGCCCGGGACCCGGA +
Preference number: 4 (lower is better)
Translates to: SLGSKDNSRGREAGFMSWLHLPG*PSPGPG
Trigger: TCCGGGTCCCGGGCTAGGCCAGCCCGGCAGGTGGAG...CCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521711.5
CDS-3UTR CCA 90 bp GGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCGAGCGCGCGCGCGGGTaGGAAACAACCCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GFQRQWVAGPVVGFMLPFERARG*ETTLAS
Trigger: GCTGGCCAGGGTTGTTTCCCACCCGCGCGCGCGCTC...GAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CCA 90 bp ACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTACCTGCCAGGTGGGTTTaGCTGGGGGTGAGAGCGCGC +
Preference number: 4 (lower is better)
Translates to: TVGRRTSGGFHAPLPWAVPARWV*LGVRAR
Trigger: GCGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGG...TACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CCA 90 bp CCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCCCGAGAGAAACACCATaGTCCCAGCCGGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: PGVDSKDSGSQDQWWVSCPRETP*SQPGPG
Trigger: GCCCGGCCCCGGCTGGGACCATGGTGTTTCTCTCGG...GCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CCA 90 bp CTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGCACCGGTGCCGGCGGTTaGGTGCAGTTGGAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: LNWLVVRHPPSSLCPTRCTGAGG*VQLELS
Trigger: CGACAGCTCCAACTGCACCCAACCGCCGGCACCGGT...GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp GGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTACCGGTGCCGGCGGTTaGGTGCAGTTGGAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: GLLGWIPKTVGRRTSGGFTGAGG*VQLELS
Trigger: CGACAGCTCCAACTGCACCCAACCGCCGGCACCGGT...AAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp GGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACACCCGGCTCTCCCTCTTaGCCACCACGTAGACGCGGC +
Preference number: 4 (lower is better)
Translates to: GRRTSGGFHAPLPWAVRTPGSPS*PPRRRG
Trigger: GCCGCGTCTACGTGGTGGCCAAGAGGGAGAGCCGGG...TGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCCCCGGCTCTCCCTCTTaGCCACCACGTAGACGCGGC +
Preference number: 4 (lower is better)
Translates to: SCSPSLGSKDNSRGREAGPGSPS*PPRRRG
Trigger: GCCGCGTCTACGTGGTGGCCAAGAGGGAGAGCCGGG...GCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp TTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCGGGTTTGGCTGGGGGTaGGAGCGCGCGCGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: FRIILNWLVVRHPPSSLCGFGWG*ERARGW
Trigger: CCACCCGCGCGCGCGCTCTCACCCCCAGCCAAACCC...GCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp AAGGCTCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGACCCCTCCTCTGGGTaGCGATGGTTGGGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: KAPGLLGWIPKTVGRRTSDPSSG*RWLGSA
Trigger: TGCGCTACCCAACCATCGTCACCCAGAGGAGGGGTC...ACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp TCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGAGCCCGGCTCCTCGTTaGTCTGGCAGATGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: SWAPGVDSKDSGSQDQWWSPAPR*SGRWSR
Trigger: ACGAGACCATCTGCCAGATCAACGAGGAGCCGGGCT...CCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp GCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCAGAAGGAGCCCAGCGCTaGGAAGAGCACGTAGCCCGG +
Preference number: 4 (lower is better)
Translates to: APGVDSKDSGSQDQWWVSEGAQR*EEHVAR
Trigger: CCGGGCTACGTGCTCTTCTCAGCGCTGGGCTCCTTC...TGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp CCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCGAAGGAGCCCAGCGCTaGGAAGAGCACGTAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PGVDSKDSGSQDQWWVSCEGAQR*EEHVAR
Trigger: CCGGGCTACGTGCTCTTCTCAGCGCTGGGCTCCTTC...GCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp CCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGGTAGAAGGTCTCTCTTaGTCCCACGGGGATGCGCAC +
Preference number: 4 (lower is better)
Translates to: PGLLGWIPKTVGRRTSGGVEGLS*SHGDAH
Trigger: GTGCGCATCCCCGTGGGATCAAGAGAGACCTTCTAC...CCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR GCA 90 bp CAAGGCTCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGCTGCCGCCCAGATGTTaGAGAAGACCCTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: QGSWAPGVDSKDSGSQDQLPPRC*RRPCRR
Trigger: CCTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAG...CTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGAGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp CCCCATTCCCAGCAGGTCCCCTCTTTGATTGGTCCTGTCTTGTCCTCCAAGAAGTCCTCGGGGGCCGGCTaGCTCCAGCCGAACAGGGGT +
Preference number: 4 (lower is better)
Translates to: PHSQQVPSLIGPVLSSKKSSGAG*LQPNRG
Trigger: ACCCCTGTTCGGCTGGAGGCAGCCGGCCCCCGAGGA...CTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp CCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGATGCGGAGCGTCACTTaGTCCGAGTCCGACTTGTCG +
Preference number: 4 (lower is better)
Translates to: PGLLGWIPKTVGRRTSGGMRSVT*SESDLS
Trigger: CGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCAT...CCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp GGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTGGTGGGAAACAACCCTaGCCAGCCCTGGGAACCCTC +
Preference number: 4 (lower is better)
Translates to: GLLGWIPKTVGRRTSGGFGGKQP*PALGTL
Trigger: GAGGGTTCCCAGGGCTGGCCAGGGTTGTTTCCCACC...AAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CCA 90 bp CCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCGAGCGCGCGCGCGGGTaGGAAACAACCCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PVVLKPCSMVYYVPSRGPERARG*ETTLAS
Trigger: GCTGGCCAGGGTTGTTTCCCACCCGCGCGCGCGCTC...GGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp TCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCCGAGAGAAACACCATaGTCCCAGCCGGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SWGGFQRQWVAGPVVGFMPRETP*SQPGPG
Trigger: GCCCGGCCCCGGCTGGGACCATGGTGTTTCTCTCGG...CATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CCA 90 bp CTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGCTCTTGGTCTTGGCGCTaGCCATCCCGCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LNWLVVRHPPSSLCPTRCSWSWR*PSRCLL
Trigger: CAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGA...GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp GTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGTCTTGGTCTTGGCGCTaGCCATCCCGCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VGRRTSGGFHAPLPWAVRSWSWR*PSRCLL
Trigger: CAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGA...CCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp AAGGCTCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTAGTGCGTCTTGGTCTTaGCGCTGGCCATCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: KAPGLLGWIPKTVGRRTSSASWS*RWPSRC
Trigger: GCAGCGGGATGGCCAGCGCCAAGACCAAGACGCACT...ACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TCTGAGTGGTTGGGGTCTTACCCCACTCCCAACATCCGTCCAGCCCTGCTGTTTCTTCCACGGCCTGGCTaGGCGGGTGCAGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: SEWLGSYPTPNIRPALLFLPRPG*AGAGCS
Trigger: GCTACACCCTGCACCCGCCCAGCCAGGCCGTGGAAG...AAACAGCAGGGCTGGACGGATGTTGGGAGTGGGGTAAGACCCCAACCACTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR CCA 90 bp CCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGCTTCCACGGCCTGGCTaGGCGGGTGCAGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: PWAVRTTVVDGKLASCHGLPRPG*AGAGCS
Trigger: GCTACACCCTGCACCCGCCCAGCCAGGCCGTGGAAG...CCCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR TCA 90 bp CTCACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGGGGTTTGGCTGGGGGTaGGAGCGCGCGCGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: LTVVQDGSRNPINSSCQKGFGWG*ERARGW
Trigger: CCACCCGCGCGCGCGCTCTCACCCCCAGCCAAACCC...CTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR TCA 90 bp CTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGCAGCCCGGCTCCTCGTTaGTCTGGCAGATGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: LNWLVVRHPPSSLCPTRCSPAPR*SGRWSR
Trigger: ACGAGACCATCTGCCAGATCAACGAGGAGCCGGGCT...GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp CTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGCCTGCCGCCCAGATGTTaGAGAAGACCCTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LNWLVVRHPPSSLCPTRCLPPRC*RRPCRR
Trigger: CCTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAG...GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp TGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGTCCTCGGGGGCCGGCTaGCTCCAGCCGAACAGGGGT +
Preference number: 4 (lower is better)
Translates to: CLNRAPWCTMYPLEAPHQSSGAG*LQPNRG
Trigger: ACCCCTGTTCGGCTGGAGGCAGCCGGCCCCCGAGGA...CTGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp ACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTACATCCCGCTGCCTCCTaGCGGGGCGTTTTTCCGATG +
Preference number: 4 (lower is better)
Translates to: TVGRRTSGGFHAPLPWAVHPAAS*RGVFPM
Trigger: CATCGGAAAAACGCCCCGGCAGGAGGCAGCGGGATG...TACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTCTCCACCTGCCGGGCTaGCCTAGCCCGGGACCCGGA +
Preference number: 4 (lower is better)
Translates to: WPSEKEVGWVPKIIPLSSLHLPG*PSPGPG
Trigger: TCCGGGTCCCGGGCTAGGCCAGCCCGGCAGGTGGAG...AGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp GGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGCAGGAACCCGAGCGCGCGCGCGGGTaGGAAACAACCCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GRRPGYLSHCSARWEQEPERARG*ETTLAS
Trigger: GCTGGCCAGGGTTGTTTCCCACCCGCGCGCGCGCTC...GGGTTCCTGCTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp CCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGACCGGTGCCGGCGGTTaGGTGCAGTTGGAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: PWAVRTTVVDGKLASCHGTGAGG*VQLELS
Trigger: CGACAGCTCCAACTGCACCCAACCGCCGGCACCGGT...CCCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp CAAGGCTCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGGGGGCGTTTTTCCGATaGATGCGGAGCGTCACTTGC +
Preference number: 4 (lower is better)
Translates to: QGSWAPGVDSKDSGSQDQGAFFR*MRSVTC
Trigger: GCAAGTGACGCTCCGCATCCATCGGAAAAACGCCCC...CTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGAGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp GGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTGTGCCCTTCCACGGCCTaGCTGGGCGGGTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GLPRRKWGGYLRLFPFPLCPSTA*LGGCRV
Trigger: CACCCTGCACCCGCCCAGCCAGGCCGTGGAAGGGCA...CAGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp GGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTGCGCAGCGCTACAGGTTaGGCGCTGCTCCTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GLPRRKWGGYLRLFPFPLRSATG*ALLLAR
Trigger: GCGGGCCAGGAGCAGCGCCCAACCTGTAGCGCTGCG...CAGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp CCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTCGTGGACGGGAAGCTaGCTTCATGTCATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: PGLLGWIPKTVGRRTSGGSWTGS*LHVMGV
Trigger: CACACCCATGACATGAAGCCAGCTTCCCGTCCACGA...CCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp TCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGGACCCCTCCTCTGGGTaGCGATGGTTGGGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: SWGGFQRQWVAGPVVGFMDPSSG*RWLGSA
Trigger: TGCGCTACCCAACCATCGTCACCCAGAGGAGGGGTC...CATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp CTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTGACCCCTCCTCTGGGTaGCGATGGTTGGGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: LGWIPKTVGRRTSGGFHADPSSG*RWLGSA
Trigger: TGCGCTACCCAACCATCGTCACCCAGAGGAGGGGTC...AGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp ACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGCCCGGCTCCTCGTTaGTCTGGCAGATGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: TVGRRTSGGFHAPLPWAVSPAPR*SGRWSR
Trigger: ACGAGACCATCTGCCAGATCAACGAGGAGCCGGGCT...TACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp GGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAAGCCCGGCTCCTCGTTaGTCTGGCAGATGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: GRRTSGGFHAPLPWAVRTSPAPR*SGRWSR
Trigger: ACGAGACCATCTGCCAGATCAACGAGGAGCCGGGCT...TGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp AAGGCTCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTCTACCCGAAGCTGGGTaGGAAGATCCAGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: KAPGLLGWIPKTVGRRTSLPEAG*EDPGDS
Trigger: GGAGTCTCCTGGATCTTCGCACCCAGCTTCGGGTAG...ACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR GCA 90 bp GGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCAGGGACCCTCTCCACCTaGCGGGCTGGCCTAGCCCGG +
Preference number: 4 (lower is better)
Translates to: GHRVTKKALAAGKCCSVSGTLST*RAGLAR
Trigger: CCGGGCTAGGCCAGCCCGGCAGGTGGAGAGGGTCCC...TGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp AACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGGGGACCCTCTCCACCTaGCGGGCTGGCCTAGCCCGG +
Preference number: 4 (lower is better)
Translates to: NCHRRMCSPVVLKPCSMVGTLST*RAGLAR
Trigger: CCGGGCTAGGCCAGCCCGGCAGGTGGAGAGGGTCCC...CACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp CTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTGTGCCGGCGGTTGGGTaGAGTTGGAGCTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: LGWIPKTVGRRTSGGFHAVPAVG*SWSCRK
Trigger: CTTCCGACAGCTCCAACTGCACCCAACCGCCGGCAC...AGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp GATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCGTGCCGGCGGTTGGGTaGAGTTGGAGCTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: DSKDSGSQDQWWVSCSPSVPAVG*SWSCRK
Trigger: CTTCCGACAGCTCCAACTGCACCCAACCGCCGGCAC...GGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp GGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCGTGCCGGCGGTTGGGTaGAGTTGGAGCTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: GFQRQWVAGPVVGFMLPFVPAVG*SWSCRK
Trigger: CTTCCGACAGCTCCAACTGCACCCAACCGCCGGCAC...GAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp CTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGCGGAAATGTTCACCGGTaGCGGCGGTTGGGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: LNWLVVRHPPSSLCPTRCGNVHR*RRLGAV
Trigger: AACTGCACCCAACCGCCGGCACCGGTGAACATTTCC...GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp GGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCGGAAATGTTCACCGGTaGCGGCGGTTGGGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: GSWGGFQRQWVAGPVVGFGNVHR*RRLGAV
Trigger: AACTGCACCCAACCGCCGGCACCGGTGAACATTTCC...GAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp TGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTTCCTCGGGGGCCGGCTaGCTCCAGCCGAACAGGGGT +
Preference number: 4 (lower is better)
Translates to: WPSEKEVGWVPKIIPLSSSSGAG*LQPNRG
Trigger: ACCCCTGTTCGGCTGGAGGCAGCCGGCCCCCGAGGA...AGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp TCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCATCCCGCTGCCTCCTaGCGGGGCGTTTTTCCGATG +
Preference number: 4 (lower is better)
Translates to: SWGGFQRQWVAGPVVGFMHPAAS*RGVFPM
Trigger: CATCGGAAAAACGCCCCGGCAGGAGGCAGCGGGATG...CATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp CAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCGCTGGCCATCCCGCTaGCTCCTGCCGGGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: QWCLNRAPWCTMYPLEAPRWPSR*LLPGRF
Trigger: AAAACGCCCCGGCAGGAGGCAGCGGGATGGCCAGCG...AGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp CAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCCTCCACCTGCCGGGCTaGCCTAGCCCGGGACCCGGA +
Preference number: 4 (lower is better)
Translates to: QGNAVPYHSELVGCETPSLHLPG*PSPGPG
Trigger: TCCGGGTCCCGGGCTAGGCCAGCCCGGCAGGTGGAG...GGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp AGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGCAGGAACCCAATCTCCACCTGCCGGGCTaGCCTAGCCCGGGACCCGGA +
Preference number: 4 (lower is better)
Translates to: RRPGYLSHCSARWEQEPNLHLPG*PSPGPG
Trigger: TCCGGGTCCCGGGCTAGGCCAGCCCGGCAGGTGGAG...ATTGGGTTCCTGCTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp AACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGCTCCACCTGCCGGGCTaGCCTAGCCCGGGACCCGGA +
Preference number: 4 (lower is better)
Translates to: NCHRRMCSPVVLKPCSMVLHLPG*PSPGPG
Trigger: TCCGGGTCCCGGGCTAGGCCAGCCCGGCAGGTGGAG...CACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp GGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCAGGGCATTAAAGACATaGCCAGGGGCGCGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: GFQRQWVAGPVVGFMLPFRALKT*PGARGA
Trigger: AGCCCCGCGCGCCCCTGGCCATGTCTTTAATGCCCT...GAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CCA 90 bp TCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGAGGGCATTAAAGACATaGCCAGGGGCGCGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: SPSLGSKDNSRGREAGFMRALKT*PGARGA
Trigger: AGCCCCGCGCGCCCCTGGCCATGTCTTTAATGCCCT...CATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521711.5
CDS-3UTR CCA 90 bp TGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGCCTGCCAGGTGGGTTTaGCTGGGGGTGAGAGCGCGC +
Preference number: 4 (lower is better)
Translates to: CLNRAPWCTMYPLEAPHQPARWV*LGVRAR
Trigger: GCGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGG...CTGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp GTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTGCCAGGTGGGTTTaGCTGGGGGTGAGAGCGCGC +
Preference number: 4 (lower is better)
Translates to: VQWCLNRAPWCTMYPLEAPARWV*LGVRAR
Trigger: GCGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGG...GGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp GGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCTCAAAAGGTCTCGGCTaGAGGGAGCCCTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GVDSKDSGSQDQWWVSCSSKGLG*REPCQV
Trigger: CACCTGGCAGGGCTCCCTCCAGCCGAGACCTTTTGA...GGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CCA 90 bp GTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCGAGAGAAACACCATaGTCCCAGCCGGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: VQWCLNRAPWCTMYPLEAPRETP*SQPGPG
Trigger: GCCCGGCCCCGGCTGGGACCATGGTGTTTCTCTCGG...GGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp GCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGTGTGTGACCGGTGCCGGCGGTTaGGTGCAGTTGGAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: AVRTTVVDGKLASCHGCVTGAGG*VQLELS
Trigger: CGACAGCTCCAACTGCACCCAACCGCCGGCACCGGT...CACACACCCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCCTAGGACCTCGAAGATaGCGGAGAAGGGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: SCSPSLGSKDNSRGREAGLGPRR*RRRAAP
Trigger: CGGTGCTGCCCTTCTCCGCCATCTTCGAGGTCCTAG...GCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp GGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCTGGGTGACGATGGTTaGGTAGCGCAGCGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: GVDSKDSGSQDQWWVSCSLGDDG*VAQRVA
Trigger: AGCTACCCGCTGCGCTACCCAACCATCGTCACCCAG...GGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp CTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGCGGCTCCTCGTTGATCTaGCAGATGGTCTCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LNWLVVRHPPSSLCPTRCGSSLI*QMVSSS
Trigger: CGAGGACGAGACCATCTGCCAGATCAACGAGGAGCC...GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp GGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCGGCTCCTCGTTGATCTaGCAGATGGTCTCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: GSWGGFQRQWVAGPVVGFGSSLI*QMVSSS
Trigger: CGAGGACGAGACCATCTGCCAGATCAACGAGGAGCC...GAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGAGTGCGTCTTGGTCTTaGCGCTGGCCATCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SKDSGSQDQWWVSCSPSLSASWS*RWPSRC
Trigger: GCAGCGGGATGGCCAGCGCCAAGACCAAGACGCACT...CAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp CTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGCGTTGGGCGCTGCTCCTaGCCCGCAGTTACCTACATT +
Preference number: 4 (lower is better)
Translates to: LNWLVVRHPPSSLCPTRCVGRCS*PAVTYI
Trigger: AATGTAGGTAACTGCGGGCCAGGAGCAGCGCCCAAC...GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp TCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCGCTGGCTTCATGTCATaGGTGTGTGTCCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: SCSPSLGSKDNSRGREAGAGFMS*VCVPGL
Trigger: CAGCCCGGGGACACACACCCATGACATGAAGCCAGC...GCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380582.7
CDS-3UTR CCA 90 bp CAAGGCTCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTCGTGGACGGGAAGCTaGCTTCATGTCATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: QGSWAPGVDSKDSGSQDQSWTGS*LHVMGV
Trigger: CACACCCATGACATGAAGCCAGCTTCCCGTCCACGA...CTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGAGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp ACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAGGGTCGCAGGACCAGTaGTGGGTTTCATGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: TVGRRTSGGFHAPLPWAVGSQDQ*WVSCSP
Trigger: AGGGGAGCATGAAACCCACCACTGGTCCTGCGACCC...TACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp AAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCGGGTCGCAGGACCAGTaGTGGGTTTCATGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: KDSGSQDQWWVSCSPSLGGSQDQ*WVSCSP
Trigger: AGGGGAGCATGAAACCCACCACTGGTCCTGCGACCC...GCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGGATTCCAAAGACAGTaGGTCGCAGGACCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: SWAPGVDSKDSGSQDQWWGFQRQ*VAGPVV
Trigger: CACCACTGGTCCTGCGACCCACTGTCTTTGGAATCC...CCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp TACCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTGGGTTTGGCTGGGGGTaGGAGCGCGCGCGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: YQVLTMKPTGPEGWDIQFGFGWG*ERARGW
Trigger: CCACCCGCGCGCGCGCTCTCACCCCCAGCCAAACCC...AAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR TCA 90 bp AAGATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCAGGGTTTGGCTGGGGGTaGGAGCGCGCGCGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: KITATEECVVQWCLNRAPGFGWG*ERARGW
Trigger: CCACCCGCGCGCGCGCTCTCACCCCCAGCCAAACCC...TGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR TCA 90 bp GTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTGAGTGCAGGTGTCGGTaGCAGGCTACGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: VDSKDSGSQDQWWVSCSPECRCR*QATERI
Trigger: GATCCTCTCCGTAGCCTGTCACCGACACCTGCACTC...AGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp GGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCGAGTGCAGGTGTCGGTaGCAGGCTACGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: GFQRQWVAGPVVGFMLPFECRCR*QATERI
Trigger: GATCCTCTCCGTAGCCTGTCACCGACACCTGCACTC...GAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp GGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCGTAGTAGTGCGTGACTaGGTGCAGGTGTCGGTGACA +
Preference number: 4 (lower is better)
Translates to: GSWGGFQRQWVAGPVVGFVVVRD*VQVSVT
Trigger: TGTCACCGACACCTGCACTCAGTCACGCACTACTAC...GAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp GTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGTCTCCCGGGAGAACTTaGGGAGCCTCACTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: VGRRTSGGFHAPLPWAVRSPGRT*GASLRS
Trigger: ACTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGA...CCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp ACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTACTACCCGAAGCTGGGTaGGAAGATCCAGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: TVGRRTSGGFHAPLPWAVLPEAG*EDPGDS
Trigger: GGAGTCTCCTGGATCTTCGCACCCAGCTTCGGGTAG...TACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR GCA 90 bp ATCTCTCTCACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCGGGACCCTCTCCACCTaGCGGGCTGGCCTAGCCCGG +
Preference number: 4 (lower is better)
Translates to: ISLTVVQDGSRNPINSSCGTLST*RAGLAR
Trigger: CCGGGCTAGGCCAGCCCGGCAGGTGGAGAGGGTCCC...GCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGTGAGAGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp GGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAGGAAATGTTCACCGGTaGCGGCGGTTGGGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: GRRTSGGFHAPLPWAVRTGNVHR*RRLGAV
Trigger: AACTGCACCCAACCGCCGGCACCGGTGAACATTTCC...TGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp TCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTGCCGCCCAGATGTTaGAGAAGACCCTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SWGGFQRQWVAGPVVGFMLPPRC*RRPCRR
Trigger: CCTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAG...CATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp CTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGCGCACAGCACATCCACTaGCGCCCAGATGTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LNWLVVRHPPSSLCPTRCAQHIH*RPDVAE
Trigger: TTCTGCAACATCTGGGCGGCAGTGGATGTGCTGTGC...GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp GACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTGCACAGCACATCCACTaGCGCCCAGATGTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: DSGSQDQWWVSCSPSLGSAQHIH*RPDVAE
Trigger: TTCTGCAACATCTGGGCGGCAGTGGATGTGCTGTGC...ACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp TCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTATGACCAGGGAGAGTaGCCAGACGCAGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SCSPSLGSKDNSRGREAGYDQGE*PDAEQS
Trigger: GCTCTGCTCTGCGTCTGGGCACTCTCCCTGGTCATA...GCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp TCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGAGCAGCCGACCACGATaGCCAGCGTTTTGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: SWGGFQRQWVAGPVVGFMSSRPR*PAFWPL
Trigger: AAGCGGCCAAAACGCTGGGCATCGTGGTCGGCTGCT...CATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp GTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTAGCAGCCGACCACGATaGCCAGCGTTTTGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: VDSKDSGSQDQWWVSCSPSSRPR*PAFWPL
Trigger: AAGCGGCCAAAACGCTGGGCATCGTGGTCGGCTGCT...AGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp CTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGCACCTACATTTTGAGCTaGCCCACCGAAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LNWLVVRHPPSSLCPTRCTYILS*PTEGSC
Trigger: GCAGGAGCCTTCGGTGGGGCAGCTCAAAATGTAGGT...GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp GACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTCAGTGGTGGGTTTCATaGTCCCCTTCCTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: DSGSQDQWWVSCSPSLGSQWWVS*SPSLGS
Trigger: ACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTG...ACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp AAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCCTCCCTACCCGAAGCTaGGTGCGAAGATCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KDSGSQDQWWVSCSPSLGLPTRS*VRRSRR
Trigger: TCTCCTGGATCTTCGCACCCAGCTTCGGGTAGGGAG...GCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CCA 90 bp CCCCATTCCCAGCAGGTCCCCTCTTTGATTGGTCCTGTCTTGTCCTCCAAGAAGAGGGCATTAAAGACATaGCCAGGGGCGCGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: PHSQQVPSLIGPVLSSKKRALKT*PGARGA
Trigger: AGCCCCGCGCGCCCCTGGCCATGTCTTTAATGCCCT...CTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp AGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGGTGGGAAACAACCCTaGCCAGCCCTGGGAACCCTC +
Preference number: 4 (lower is better)
Translates to: RTSGGFHAPLPWAVRTTVGGKQP*PALGTL
Trigger: GAGGGTTCCCAGGGCTGGCCAGGGTTGTTTCCCACC...GACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CCA 90 bp ACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTGAGCGCGCGCGCGGGTaGGAAACAACCCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TATEECVVQWCLNRAPWCERARG*ETTLAS
Trigger: GCTGGCCAGGGTTGTTTCCCACCCGCGCGCGCGCTC...ACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp AAGAGCTGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTCCTGCCAGGTGGGTTTaGCTGGGGGTGAGAGCGCGC +
Preference number: 4 (lower is better)
Translates to: KSWPSEKEVGWVPKIIPLPARWV*LGVRAR
Trigger: GCGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGG...AAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCAGCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp GTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCACCGGTGCCGGCGGTTaGGTGCAGTTGGAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: VQWCLNRAPWCTMYPLEATGAGG*VQLELS
Trigger: CGACAGCTCCAACTGCACCCAACCGCCGGCACCGGT...GGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp TGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGACCGGTGCCGGCGGTTaGGTGCAGTTGGAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: CLNRAPWCTMYPLEAPHQTGAGG*VQLELS
Trigger: CGACAGCTCCAACTGCACCCAACCGCCGGCACCGGT...CTGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp GGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCGAGCAGAATGGCCTTaGAAATGTTCACCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: GLLGWIPKTVGRRTSGGFRAEWP*KCSPVP
Trigger: CGGCACCGGTGAACATTTCCAAGGCCATTCTGCTCG...AAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp AAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCGGGGCGTTTTTCCGATaGATGCGGAGCGTCACTTGC +
Preference number: 4 (lower is better)
Translates to: KDSGSQDQWWVSCSPSLGGAFFR*MRSVTC
Trigger: GCAAGTGACGCTCCGCATCCATCGGAAAAACGCCCC...GCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCGGGGCGTTTTTCCGATaGATGCGGAGCGTCACTTGC +
Preference number: 4 (lower is better)
Translates to: SCSPSLGSKDNSRGREAGGAFFR*MRSVTC
Trigger: GCAAGTGACGCTCCGCATCCATCGGAAAAACGCCCC...GCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp AGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCTCTTGGTCTTGGCGCTaGCCATCCCGCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RTSGGFHAPLPWAVRTTVSWSWR*PSRCLL
Trigger: CAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGA...GACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp GCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGTGTGTGAGTGCGTCTTGGTCTTaGCGCTGGCCATCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: AVRTTVVDGKLASCHGCVSASWS*RWPSRC
Trigger: GCAGCGGGATGGCCAGCGCCAAGACCAAGACGCACT...CACACACCCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp GCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCACTGAGAAGTGCGTCTTaGTCTTGGCGCTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: APGVDSKDSGSQDQWWVSLRSAS*SWRWPS
Trigger: GGATGGCCAGCGCCAAGACCAAGACGCACTTCTCAG...TGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCTTCCACGGCCTGGCTaGGCGGGTGCAGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: FRIILNWLVVRHPPSSLCLPRPG*AGAGCS
Trigger: GCTACACCCTGCACCCGCCCAGCCAGGCCGTGGAAG...GCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp ACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTTGCCCTTCCACGGCCTaGCTGGGCGGGTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TATEECVVQWCLNRAPWCCPSTA*LGGCRV
Trigger: CACCCTGCACCCGCCCAGCCAGGCCGTGGAAGGGCA...ACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR CCA 90 bp CCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCATTAGCTGGGCCTGGTaGCGTCGGCCTGGTGGCACA +
Preference number: 4 (lower is better)
Translates to: PVVLKPCSMVYYVPSRGPISWAW*RRPGGT
Trigger: TGTGCCACCAGGCCGACGCCACCAGGCCCAGCTAAT...GGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp GGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACATCGCAGGACCAGTGGTaGGTTTCATGCTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GRRTSGGFHAPLPWAVRTSQDQW*VSCSPS
Trigger: GGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGA...TGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp TGGGAAGGTAAGATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACGGGTTTGGCTGGGGGTaGGAGCGCGCGCGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: WEGKITATEECVVQWCLNGFGWG*ERARGW
Trigger: CCACCCGCGCGCGCGCTCTCACCCCCAGCCAAACCC...GTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTTACCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR TCA 90 bp ACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTACGATGTAGTAGTGCGTaGCTGAGTGCAGGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: TVGRRTSGGFHAPLPWAVRCSSA*LSAGVG
Trigger: ACCGACACCTGCACTCAGTCACGCACTACTACATCG...TACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp GACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTCTTGAGGAGCCTCACTaGGAAGTGCGTCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: DSGSQDQWWVSCSPSLGSLEEPH*EVRLGL
Trigger: AAGACCAAGACGCACTTCTCAGTGAGGCTCCTCAAG...ACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp AAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCTCTCCCGGGAGAACTTaGGGAGCCTCACTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: KDSGSQDQWWVSCSPSLGSPGRT*GASLRS
Trigger: ACTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGA...GCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp CCCCATTCCCAGCAGGTCCCCTCTTTGATTGGTCCTGTCTTGTCCTCCAAGAAGCCTCCCCGTTCTCACTaGGGGAGATGGTGTGGACCT +
Preference number: 4 (lower is better)
Translates to: PHSQQVPSLIGPVLSSKKPPRSH*GRWCGP
Trigger: AGGTCCACACCATCTCCCTCAGTGAGAACGGGGAGG...CTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp GAGGAGCAGCATCCATTCAAAGTGCAGTCAAAGGTAAACCTCACTGCCAAGTTTCTGAAGCGCCGCTGCTaGGCCACCAGCTCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: EEQHPFKVQSKVNLTAKFLKRRC*ATSSRA
Trigger: CGCGCGCGAGCTGGTGGCTCAGCAGCGGCGCTTCAG...AAACTTGGCAGTGAGGTTTACCTTTGACTGCACTTTGAATGGATGCTGCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp AAGATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCAGGGACCCTCTCCACCTaGCGGGCTGGCCTAGCCCGG +
Preference number: 4 (lower is better)
Translates to: KITATEECVVQWCLNRAPGTLST*RAGLAR
Trigger: CCGGGCTAGGCCAGCCCGGCAGGTGGAGAGGGTCCC...TGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp ACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTGGCTGGAGGGAGCCCTaGCAGGTGGGTTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TATEECVVQWCLNRAPWCGWREP*QVGLAG
Trigger: CCCAGCCAAACCCACCTGGCAGGGCTCCCTCCAGCC...ACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp AACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGGGCTGGAGGGAGCCCTaGCAGGTGGGTTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: NCHRRMCSPVVLKPCSMVGWREP*QVGLAG
Trigger: CCCAGCCAAACCCACCTGGCAGGGCTCCCTCCAGCC...CACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp GTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGTGCCGGCGGTTGGGTaGAGTTGGAGCTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: VLKPCSMVYYVPSRGPSPVPAVG*SWSCRK
Trigger: CTTCCGACAGCTCCAACTGCACCCAACCGCCGGCAC...TGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp TCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGAAATGTTCACCGGTaGCGGCGGTTGGGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SKDSGSQDQWWVSCSPSLGNVHR*RRLGAV
Trigger: AACTGCACCCAACCGCCGGCACCGGTGAACATTTCC...CAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp TTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGCTGCCGCCCAGATGTTaGAGAAGACCCTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: FHAPLPWAVRTTVVDGKLLPPRC*RRPCRR
Trigger: CCTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAG...CAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp TGTTCTCACTACCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATTCCTCGGGGGCCGGCTaGCTCCAGCCGAACAGGGGT +
Preference number: 4 (lower is better)
Translates to: CSHYQVLTMKPTGPEGWDSSGAG*LQPNRG
Trigger: ACCCCTGTTCGGCTGGAGGCAGCCGGCCCCCGAGGA...ATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGGTAGTGAGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp CCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGATGCGGAGCGTCACTTaGTCCGAGTCCGACTTGTCG +
Preference number: 4 (lower is better)
Translates to: PWAVRTTVVDGKLASCHGMRSVT*SESDLS
Trigger: CGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCAT...CCCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp CCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCCGTTTTTCCGATGGATaGGGAGCGTCACTTGCTCCG +
Preference number: 4 (lower is better)
Translates to: PGVDSKDSGSQDQWWVSCRFSDG*GASLAP
Trigger: CGGAGCAAGTGACGCTCCGCATCCATCGGAAAAACG...GCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp GTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCATCCCGCTGCCTCCTaGCGGGGCGTTTTTCCGATG +
Preference number: 4 (lower is better)
Translates to: VQWCLNRAPWCTMYPLEAHPAAS*RGVFPM
Trigger: CATCGGAAAAACGCCCCGGCAGGAGGCAGCGGGATG...GGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp AACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGCGCTGGCCATCCCGCTaGCTCCTGCCGGGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: NCHRRMCSPVVLKPCSMVRWPSR*LLPGRF
Trigger: AAAACGCCCCGGCAGGAGGCAGCGGGATGGCCAGCG...CACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp GCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCAAGCCTCACTGAGAAGTaGGTCTTGGTCTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: APGVDSKDSGSQDQWWVSSLTEK*VLVLAL
Trigger: CAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGCT...TGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp CCCCATTCCCAGCAGGTCCCCTCTTTGATTGGTCCTGTCTTGTCCTCCAAGAAGAGCAGCCGACCACGATaGCCAGCGTTTTGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: PHSQQVPSLIGPVLSSKKSSRPR*PAFWPL
Trigger: AAGCGGCCAAAACGCTGGGCATCGTGGTCGGCTGCT...CTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp GTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCAGGGCATTAAAGACATaGCCAGGGGCGCGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: VQWCLNRAPWCTMYPLEARALKT*PGARGA
Trigger: AGCCCCGCGCGCCCCTGGCCATGTCTTTAATGCCCT...GGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp GGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTGGGTGGGAAACAACCCTaGCCAGCCCTGGGAACCCTC +
Preference number: 4 (lower is better)
Translates to: GLPRRKWGGYLRLFPFPLGGKQP*PALGTL
Trigger: GAGGGTTCCCAGGGCTGGCCAGGGTTGTTTCCCACC...CAGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp CTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTAGGAACAAGCGATGTCGAGCGCGCGCGCGGGTaGGAAACAACCCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLGQKVGISSFHLGTSDVERARG*ETTLAS
Trigger: GCTGGCCAGGGTTGTTTCCCACCCGCGCGCGCGCTC...GACATCGCTTGTTCCTAAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp AGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCTCAAAAGGTCTCGGCTaGAGGGAGCCCTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RTSGGFHAPLPWAVRTTVSKGLG*REPCQV
Trigger: CACCTGGCAGGGCTCCCTCCAGCCGAGACCTTTTGA...GACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CCA 90 bp GGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAGCGGTTGGGTGCAGTTaGAGCTGTCGGAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: GRRTSGGFHAPLPWAVRTAVGCS*SCRKHF
Trigger: GAAATGCTTCCGACAGCTCCAACTGCACCCAACCGC...TGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCGCGGTTGGGTGCAGTTaGAGCTGTCGGAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: SCSPSLGSKDNSRGREAGAVGCS*SCRKHF
Trigger: GAAATGCTTCCGACAGCTCCAACTGCACCCAACCGC...GCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp AAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCGCGGTTGGGTGCAGTTaGAGCTGTCGGAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: KDSGSQDQWWVSCSPSLGAVGCS*SCRKHF
Trigger: GAAATGCTTCCGACAGCTCCAACTGCACCCAACCGC...GCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp CTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGCTCACCCCGAGCAGAATaGCCTTGGAAATGTTCACCG +
Preference number: 4 (lower is better)
Translates to: LNWLVVRHPPSSLCPTRCSPRAE*PWKCSP
Trigger: CGGTGAACATTTCCAAGGCCATTCTGCTCGGGGTGA...GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp CAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACTAGGACCTCGAAGATaGCGGAGAAGGGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: QWWVSCSPSLGSKDNSRGLGPRR*RRRAAP
Trigger: CGGTGCTGCCCTTCTCCGCCATCTTCGAGGTCCTAG...TCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGCTGGGTGACGATGGTTaGGTAGCGCAGCGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: FHAPLPWAVRTTVVDGKLLGDDG*VAQRVA
Trigger: AGCTACCCGCTGCGCTACCCAACCATCGTCACCCAG...CAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TCTGAGTGGTTGGGGTCTTACCCCACTCCCAACATCCGTCCAGCCCTGCTGTTTGGCTCCTCGTTGATCTaGCAGATGGTCTCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: SEWLGSYPTPNIRPALLFGSSLI*QMVSSS
Trigger: CGAGGACGAGACCATCTGCCAGATCAACGAGGAGCC...AAACAGCAGGGCTGGACGGATGTTGGGAGTGGGGTAAGACCCCAACCACTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp CAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCCCCGGCTCTCCCTCTTaGCCACCACGTAGACGCGGC +
Preference number: 4 (lower is better)
Translates to: QGNAVPYHSELVGCETPSPGSPS*PPRRRG
Trigger: GCCGCGTCTACGTGGTGGCCAAGAGGGAGAGCCGGG...GGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp ACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTCCCGGCTCTCCCTCTTaGCCACCACGTAGACGCGGC +
Preference number: 4 (lower is better)
Translates to: TATEECVVQWCLNRAPWCPGSPS*PPRRRG
Trigger: GCCGCGTCTACGTGGTGGCCAAGAGGGAGAGCCGGG...ACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp CAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTTCTTGGTCTTGGCGCTaGCCATCCCGCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QWCLNRAPWCTMYPLEAPSWSWR*PSRCLL
Trigger: CAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGA...AGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp GGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGCAGGAACCCAGTGCGTCTTGGTCTTaGCGCTGGCCATCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GRRPGYLSHCSARWEQEPSASWS*RWPSRC
Trigger: GCAGCGGGATGGCCAGCGCCAAGACCAAGACGCACT...GGGTTCCTGCTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp GTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAAGTGCGTCTTGGTCTTaGCGCTGGCCATCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VLKPCSMVYYVPSRGPSPSASWS*RWPSRC
Trigger: GCAGCGGGATGGCCAGCGCCAAGACCAAGACGCACT...TGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp TGTTCTCACTACCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATTGCCCTTCCACGGCCTaGCTGGGCGGGTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CSHYQVLTMKPTGPEGWDCPSTA*LGGCRV
Trigger: CACCCTGCACCCGCCCAGCCAGGCCGTGGAAGGGCA...ATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGGTAGTGAGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp CTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGCTTCTCACCCGGGCTGTaGTACAGGAGGATTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LNWLVVRHPPSSLCPTRCFSPGL*YRRIGL
Trigger: AAGACCAATCCTCCTGTACCACAGCCCGGGTGAGAA...GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp GGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCTGTGTCCCCGGGCTGTaGTACAGGAGGATTGGTCTT +
Preference number: 4 (lower is better)
Translates to: GVDSKDSGSQDQWWVSCSCVPGL*YRRIGL
Trigger: AAGACCAATCCTCCTGTACCACAGCCCGGGGACACA...GGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380582.7
CDS-3UTR CCA 90 bp GTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGCATGCTCCCCTTCCTTaGGCAGTAAGGACAACAGTC +
Preference number: 4 (lower is better)
Translates to: VGRRTSGGFHAPLPWAVRHAPLP*AVRTTV
Trigger: GACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATG...CCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGGGTCGCAGGACCAGTaGTGGGTTTCATGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SLGSKDNSRGREAGFMSWGSQDQ*WVSCSP
Trigger: AGGGGAGCATGAAACCCACCACTGGTCCTGCGACCC...CCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
3UTR CAA 72 bp TCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTaGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SQDQWWVSCSPS*GSKDNSRGREA
Trigger: AGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp GTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTCCTCAGAAGGCCACATaGAGGGGCAGGGCATTAAAG +
Preference number: 4 (lower is better)
Translates to: VDSKDSGSQDQWWVSCSPPQKAT*RGRALK
Trigger: CTTTAATGCCCTGCCCCTTCATGTGGCCTTCTGAGG...AGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR TCA 90 bp GGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTGGAGTGCAGGTGTCGGTaGCAGGCTACGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: GLPRRKWGGYLRLFPFPLECRCR*QATERI
Trigger: GATCCTCTCCGTAGCCTGTCACCGACACCTGCACTC...CAGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp GTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGAGTGCAGGTGTCGGTaGCAGGCTACGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: VLKPCSMVYYVPSRGPSPECRCR*QATERI
Trigger: GATCCTCTCCGTAGCCTGTCACCGACACCTGCACTC...TGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR TCA 90 bp GATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCGTAGTAGTGCGTGACTaGGTGCAGGTGTCGGTGACA +
Preference number: 4 (lower is better)
Translates to: DSKDSGSQDQWWVSCSPSVVVRD*VQVSVT
Trigger: TGTCACCGACACCTGCACTCAGTCACGCACTACTAC...GGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp GGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCGATGTAGTAGTGCGTaGCTGAGTGCAGGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: GFQRQWVAGPVVGFMLPFRCSSA*LSAGVG
Trigger: ACCGACACCTGCACTCAGTCACGCACTACTACATCG...GAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp AGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCGACCCCTCCTCTGGGTaGCGATGGTTGGGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: SPVVLKPCSMVYYVPSRGDPSSG*RWLGSA
Trigger: TGCGCTACCCAACCATCGTCACCCAGAGGAGGGGTC...GCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR TCA 90 bp GGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGCAGGAACCCAGCCCGGCTCCTCGTTaGTCTGGCAGATGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: GRRPGYLSHCSARWEQEPSPAPR*SGRWSR
Trigger: ACGAGACCATCTGCCAGATCAACGAGGAGCCGGGCT...GGGTTCCTGCTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR TCA 90 bp ACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTGAAGGAGCCCAGCGCTaGGAAGAGCACGTAGCCCGG +
Preference number: 4 (lower is better)
Translates to: TATEECVVQWCLNRAPWCEGAQR*EEHVAR
Trigger: CCGGGCTACGTGCTCTTCTCAGCGCTGGGCTCCTTC...ACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR TCA 90 bp CGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACATCTCCCGGGAGAACTTaGGGAGCCTCACTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: RRTSGGFHAPLPWAVRTTSPGRT*GASLRS
Trigger: ACTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGA...TGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp CCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCGTAGAAGGTCTCTCTTaGTCCCACGGGGATGCGCAC +
Preference number: 4 (lower is better)
Translates to: PVVLKPCSMVYYVPSRGPVEGLS*SHGDAH
Trigger: GTGCGCATCCCCGTGGGATCAAGAGAGACCTTCTAC...GGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR TCA 90 bp GGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCAGCGGGTTCTCAAGTTaGGGATCCCTCTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: GSWGGFQRQWVAGPVVGFSGFSS*GSLSFP
Trigger: AGGAAATGAGAGGGATCCTCAACTTGAGAACCCGCT...GAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR GCA 90 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCGGCTGGAGGGAGCCCTaGCAGGTGGGTTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LKWAQSDQESISCREMLFGWREP*QVGLAG
Trigger: CCCAGCCAAACCCACCTGGCAGGGCTCCCTCCAGCC...GAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp AGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCTATGACCAGGGAGAGTaGCCAGACGCAGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RTSGGFHAPLPWAVRTTVYDQGE*PDAEQS
Trigger: GCTCTGCTCTGCGTCTGGGCACTCTCCCTGGTCATA...GACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp GCGAGACTTCGTCTGATTTTCCTGGGTCAGTCCCTATTAAACATGGGTGTTTCATCCTCGGGGGCCGGCTaGCTCCAGCCGAACAGGGGT +
Preference number: 4 (lower is better)
Translates to: ARLRLIFLGQSLLNMGVSSSGAG*LQPNRG
Trigger: ACCCCTGTTCGGCTGGAGGCAGCCGGCCCCCGAGGA...TGAAACACCCATGTTTAATAGGGACTGACCCAGGAAAATCAGACGAAGTCTCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519096.5
CDS-3UTR GCA 90 bp TTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGATGCGGAGCGTCACTTaGTCCGAGTCCGACTTGTCG +
Preference number: 4 (lower is better)
Translates to: FHAPLPWAVRTTVVDGKLMRSVT*SESDLS
Trigger: CGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCAT...CAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp GATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCCGTTTTTCCGATGGATaGGGAGCGTCACTTGCTCCG +
Preference number: 4 (lower is better)
Translates to: DSKDSGSQDQWWVSCSPSRFSDG*GASLAP
Trigger: CGGAGCAAGTGACGCTCCGCATCCATCGGAAAAACG...GGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp AAGAGCTGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTCATCCCGCTGCCTCCTaGCGGGGCGTTTTTCCGATG +
Preference number: 4 (lower is better)
Translates to: KSWPSEKEVGWVPKIIPLHPAAS*RGVFPM
Trigger: CATCGGAAAAACGCCCCGGCAGGAGGCAGCGGGATG...AAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCAGCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp AGTTCAGACTTCAGTAGAGCGGGTTCTCAAGTTGAGGATCCCTCTCATTTCCTCCGCTGGCCATCCCGCTaGCTCCTGCCGGGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: SSDFSRAGSQVEDPSHFLRWPSR*LLPGRF
Trigger: AAAACGCCCCGGCAGGAGGCAGCGGGATGGCCAGCG...GAGGAAATGAGAGGGATCCTCAACTTGAGAACCCGCTCTACTGAAGTCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR GCA 90 bp TCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGAGCCTCACTGAGAAGTaGGTCTTGGTCTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SPSLGSKDNSRGREAGFMSLTEK*VLVLAL
Trigger: CAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGCT...CATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGCTCCCTACCCGAAGCTaGGTGCGAAGATCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: FHAPLPWAVRTTVVDGKLLPTRS*VRRSRR
Trigger: TCTCCTGGATCTTCGCACCCAGCTTCGGGTAGGGAG...CAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CCA 90 bp TCAGTCCCTATTAAACATGGGTGTTTCACTTCTCAGCTGTGGATAGCACACTCACTCCACCTGCCGGGCTaGCCTAGCCCGGGACCCGGA +
Preference number: 4 (lower is better)
Translates to: SVPIKHGCFTSQLWIAHSLHLPG*PSPGPG
Trigger: TCCGGGTCCCGGGCTAGGCCAGCCCGGCAGGTGGAG...TGAGTGTGCTATCCACAGCTGAGAAGTGAAACACCCATGTTTAATAGGGACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519096.5
ENST00000521711.5
CDS-3UTR CCA 90 bp GAGGAGCAGCATCCATTCAAAGTGCAGTCAAAGGTAAACCTCACTGCCAAGTTTGAGCGCGCGCGCGGGTaGGAAACAACCCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EEQHPFKVQSKVNLTAKFERARG*ETTLAS
Trigger: GCTGGCCAGGGTTGTTTCCCACCCGCGCGCGCGCTC...AAACTTGGCAGTGAGGTTTACCTTTGACTGCACTTTGAATGGATGCTGCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp TGTTCTCACTACCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATCCTGCCAGGTGGGTTTaGCTGGGGGTGAGAGCGCGC +
Preference number: 4 (lower is better)
Translates to: CSHYQVLTMKPTGPEGWDPARWV*LGVRAR
Trigger: GCGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGG...ATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGGTAGTGAGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp CAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTTCAAAAGGTCTCGGCTaGAGGGAGCCCTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: QWCLNRAPWCTMYPLEAPSKGLG*REPCQV
Trigger: CACCTGGCAGGGCTCCCTCCAGCCGAGACCTTTTGA...AGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp TGTTCTCACTACCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATCCGAGAGAAACACCATaGTCCCAGCCGGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: CSHYQVLTMKPTGPEGWDPRETP*SQPGPG
Trigger: GCCCGGCCCCGGCTGGGACCATGGTGTTTCTCTCGG...ATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGGTAGTGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp GATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGCCGAGAGAAACACCATaGTCCCAGCCGGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: DNCHRRMCSPVVLKPCSMPRETP*SQPGPG
Trigger: GCCCGGCCCCGGCTGGGACCATGGTGTTTCTCTCGG...CATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp CCCCATTCCCAGCAGGTCCCCTCTTTGATTGGTCCTGTCTTGTCCTCCAAGAAGGGCTCCTCGTTGATCTaGCAGATGGTCTCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: PHSQQVPSLIGPVLSSKKGSSLI*QMVSSS
Trigger: CGAGGACGAGACCATCTGCCAGATCAACGAGGAGCC...CTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp GATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGCCCGGCTCTCCCTCTTaGCCACCACGTAGACGCGGC +
Preference number: 4 (lower is better)
Translates to: DNCHRRMCSPVVLKPCSMPGSPS*PPRRRG
Trigger: GCCGCGTCTACGTGGTGGCCAAGAGGGAGAGCCGGG...CATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp AGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCAGTGCGTCTTGGTCTTaGCGCTGGCCATCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SPVVLKPCSMVYYVPSRGSASWS*RWPSRC
Trigger: GCAGCGGGATGGCCAGCGCCAAGACCAAGACGCACT...GCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp CCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCCTGAGAAGTGCGTCTTaGTCTTGGCGCTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: PVVLKPCSMVYYVPSRGPLRSAS*SWRWPS
Trigger: GGATGGCCAGCGCCAAGACCAAGACGCACTTCTCAG...GGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp CAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACTGAGAAGTGCGTCTTaGTCTTGGCGCTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: QWWVSCSPSLGSKDNSRGLRSAS*SWRWPS
Trigger: GGATGGCCAGCGCCAAGACCAAGACGCACTTCTCAG...TCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCTTCCACGGCCTGGCTaGGCGGGTGCAGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: LKWAQSDQESISCREMLFLPRPG*AGAGCS
Trigger: GCTACACCCTGCACCCGCCCAGCCAGGCCGTGGAAG...GAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp CAAGGCTCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGAAACGCCATCCGTCTTaGAGATCCTGTAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: QGSWAPGVDSKDSGSQDQKRHPS*RSCRRS
Trigger: AGACCTTCTACAGGATCTCCAAGACGGATGGCGTTT...CTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGAGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR CCA 90 bp TGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTGCAGGGACCGATGGTTaGGTAGCGCAGCGCTACAGG +
Preference number: 4 (lower is better)
Translates to: WPSEKEVGWVPKIIPLSSAGTDG*VAQRYR
Trigger: CCTGTAGCGCTGCGCTACCCAACCATCGGTCCCTGC...AGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp AGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCGTGGCGTCGGCCTGGTaGCACATCCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SPVVLKPCSMVYYVPSRGVASAW*HIPVVP
Trigger: TGGGACTACAGGGATGTGCCACCAGGCCGACGCCAC...GCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp TCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGTCGTGGACGGGAAGCTaGCTTCATGTCATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SWGGFQRQWVAGPVVGFMSWTGS*LHVMGV
Trigger: CACACCCATGACATGAAGCCAGCTTCCCGTCCACGA...CATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp AAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGTGTGTGTCCCTTCGCAGGACCAGTGGTaGGTTTCATGCTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: KDNSRGREAGFMSWVCVPSQDQW*VSCSPS
Trigger: GGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGA...AGGGACACACACCCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp GTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTGGATTCCAAAGACAGTaGGTCGCAGGACCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: VDSKDSGSQDQWWVSCSPGFQRQ*VAGPVV
Trigger: CACCACTGGTCCTGCGACCCACTGTCTTTGGAATCC...AGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp ATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTCCTGGGCTCCTGGGGTaGATTCCAAAGACAGTGGGT +
Preference number: 4 (lower is better)
Translates to: IPKTVGRRTSGGFHAPLPPGLLG*IPKTVG
Trigger: ACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGG...AGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp AAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGTGTGTGTCCCTCCTGGGCTCCTGGGGTaGATTCCAAAGACAGTGGGT +
Preference number: 4 (lower is better)
Translates to: KDNSRGREAGFMSWVCVPPGLLG*IPKTVG
Trigger: ACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGG...AGGGACACACACCCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp ACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTACAGAAGACCGGGCTGTaGTACAGGAGGATTGGTCTT +
Preference number: 4 (lower is better)
Translates to: TVGRRTSGGFHAPLPWAVQKTGL*YRRIGL
Trigger: AAGACCAATCCTCCTGTACCACAGCCCGGTCTTCTG...TACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR TCA 90 bp TTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCGAGTGCAGGTGTCGGTaGCAGGCTACGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: FRIILNWLVVRHPPSSLCECRCR*QATERI
Trigger: GATCCTCTCCGTAGCCTGTCACCGACACCTGCACTC...GCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp AGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGCAGGAACCCAATGACCCCTCCTCTGGGTaGCGATGGTTGGGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: RRPGYLSHCSARWEQEPNDPSSG*RWLGSA
Trigger: TGCGCTACCCAACCATCGTCACCCAGAGGAGGGGTC...ATTGGGTTCCTGCTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR TCA 90 bp ATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTGAAGGAGCCCAGCGCTaGGAAGAGCACGTAGCCCGG +
Preference number: 4 (lower is better)
Translates to: MCSPVVLKPCSMVYYVPSEGAQR*EEHVAR
Trigger: CCGGGCTACGTGCTCTTCTCAGCGCTGGGCTCCTTC...AGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR TCA 90 bp CGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACACTTGAGGAGCCTCACTaGGAAGTGCGTCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: RRTSGGFHAPLPWAVRTTLEEPH*EVRLGL
Trigger: AAGACCAAGACGCACTTCTCAGTGAGGCTCCTCAAG...TGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp CCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCTCCCGGGAGAACTTaGGGAGCCTCACTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: PVVLKPCSMVYYVPSRGPSPGRT*GASLRS
Trigger: ACTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGA...GGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR TCA 90 bp TCTGAGTGGTTGGGGTCTTACCCCACTCCCAACATCCGTCCAGCCCTGCTGTTTGAGGCAGGCAGATCATaGGGTCAAGAGATCGAGATC +
Preference number: 4 (lower is better)
Translates to: SEWLGSYPTPNIRPALLFEAGRS*GQEIEI
Trigger: GATCTCGATCTCTTGACCTCATGATCTGCCTGCCTC...AAACAGCAGGGCTGGACGGATGTTGGGAGTGGGGTAAGACCCCAACCACTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp TCAGGACTTGCTCTAAAAATAATGTGTCTGGATCTCGGCCACCATCTTAATGCTGGGACCCTCTCCACCTaGCGGGCTGGCCTAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SGLALKIMCLDLGHHLNAGTLST*RAGLAR
Trigger: CCGGGCTAGGCCAGCCCGGCAGGTGGAGAGGGTCCC...AGCATTAAGATGGTGGCCGAGATCCAGACACATTATTTTTAGAGCAAGTCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp TACCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTGGCTGGAGGGAGCCCTaGCAGGTGGGTTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: YQVLTMKPTGPEGWDIQFGWREP*QVGLAG
Trigger: CCCAGCCAAACCCACCTGGCAGGGCTCCCTCCAGCC...AAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp ACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATGGCTGGAGGGAGCCCTaGCAGGTGGGTTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TVVQDGSRNPINSSCQKNGWREP*QVGLAG
Trigger: CCCAGCCAAACCCACCTGGCAGGGCTCCCTCCAGCC...ATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp GTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCGGAAATGTTCACCGGTaGCGGCGGTTGGGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: VQWCLNRAPWCTMYPLEAGNVHR*RRLGAV
Trigger: AACTGCACCCAACCGCCGGCACCGGTGAACATTTCC...GGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp GTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCATATGACCAGGGAGAGTaGCCAGACGCAGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VLKPCSMVYYVPSRGPSPYDQGE*PDAEQS
Trigger: GCTCTGCTCTGCGTCTGGGCACTCTCCCTGGTCATA...TGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp GTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCATGCGGAGCGTCACTTaGTCCGAGTCCGACTTGTCG +
Preference number: 4 (lower is better)
Translates to: VQWCLNRAPWCTMYPLEAMRSVT*SESDLS
Trigger: CGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCAT...GGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp AGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCCGTTTTTCCGATGGATaGGGAGCGTCACTTGCTCCG +
Preference number: 4 (lower is better)
Translates to: RTSGGFHAPLPWAVRTTVRFSDG*GASLAP
Trigger: CGGAGCAAGTGACGCTCCGCATCCATCGGAAAAACG...GACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp CCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCCGTTTTTCCGATGGATaGGGAGCGTCACTTGCTCCG +
Preference number: 4 (lower is better)
Translates to: PVVLKPCSMVYYVPSRGPRFSDG*GASLAP
Trigger: CGGAGCAAGTGACGCTCCGCATCCATCGGAAAAACG...GGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp CAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACGCTGGCCATCCCGCTaGCTCCTGCCGGGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: QVLTMKPTGPEGWDIQFSRWPSR*LLPGRF
Trigger: AAAACGCCCCGGCAGGAGGCAGCGGGATGGCCAGCG...TGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp TGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTAGCAGCCGACCACGATaGCCAGCGTTTTGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: WPSEKEVGWVPKIIPLSSSSRPR*PAFWPL
Trigger: AAGCGGCCAAAACGCTGGGCATCGTGGTCGGCTGCT...AGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp CAAGGCTCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGAAGACTGCTTTCTaGAGAGACACTGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: QGSWAPGVDSKDSGSQDQWKTAF*RDTGFS
Trigger: TGAGAATCCAGTGTCTCTGCAGAAAGCAGTCTTCCA...CTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGAGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR GCA 90 bp GGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCGCATGTTTGGAAGACTaGTTTCTGCAGAGACACTGG +
Preference number: 4 (lower is better)
Translates to: GSWGGFQRQWVAGPVVGFACLED*FLQRHW
Trigger: CCAGTGTCTCTGCAGAAAGCAGTCTTCCAAACATGC...GAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR GCA 90 bp CTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGCCCAAGACATCATGAGTaGCCCTCACTCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: LNWLVVRHPPSSLCPTRCPRHHE*PSLSSL
Trigger: CAAAGATGAGAGTGAGGGGCACTCATGATGTCTTGG...GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp CACGTGGCTGATGATTCTCAATTAACTTTTAAGAATGAAATGGGGGAGGGAGGTCTCCACCTGCCGGGCTaGCCTAGCCCGGGACCCGGA +
Preference number: 4 (lower is better)
Translates to: HVADDSQLTFKNEMGEGGLHLPG*PSPGPG
Trigger: TCCGGGTCCCGGGCTAGGCCAGCCCGGCAGGTGGAG...ACCTCCCTCCCCCATTTCATTCTTAAAAGTTAATTGAGAATCATCAGCCACGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CCA 90 bp AAGAGCTGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCAAAAGGTCTCGGCTaGAGGGAGCCCTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: KSWPSEKEVGWVPKIIPLSKGLG*REPCQV
Trigger: CACCTGGCAGGGCTCCCTCCAGCCGAGACCTTTTGA...AAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCAGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp CTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTAGGAACAAGCGATGTCACCGGTGCCGGCGGTTaGGTGCAGTTGGAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: LLGQKVGISSFHLGTSDVTGAGG*VQLELS
Trigger: CGACAGCTCCAACTGCACCCAACCGCCGGCACCGGT...GACATCGCTTGTTCCTAAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp ACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATCCCGGCTCTCCCTCTTaGCCACCACGTAGACGCGGC +
Preference number: 4 (lower is better)
Translates to: TVVQDGSRNPINSSCQKNPGSPS*PPRRRG
Trigger: GCCGCGTCTACGTGGTGGCCAAGAGGGAGAGCCGGG...ATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp GGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGCAGGAACCCGGGGCGTTTTTCCGATaGATGCGGAGCGTCACTTGC +
Preference number: 4 (lower is better)
Translates to: GRRPGYLSHCSARWEQEPGAFFR*MRSVTC
Trigger: GCAAGTGACGCTCCGCATCCATCGGAAAAACGCCCC...GGGTTCCTGCTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp TGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGGGGGCGTTTTTCCGATaGATGCGGAGCGTCACTTGC +
Preference number: 4 (lower is better)
Translates to: CLNRAPWCTMYPLEAPHQGAFFR*MRSVTC
Trigger: GCAAGTGACGCTCCGCATCCATCGGAAAAACGCCCC...CTGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp GGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATCTTGGTCTTGGCGCTaGCCATCCCGCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GHRVTKKALAAGKCCSVSSWSWR*PSRCLL
Trigger: CAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGA...TGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp AACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTCTTGGTCTTGGCGCTaGCCATCCCGCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: NCHRRMCSPVVLKPCSMVSWSWR*PSRCLL
Trigger: CAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGA...CACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp CAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCTGAGAAGTGCGTCTTaGTCTTGGCGCTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: QWCLNRAPWCTMYPLEAPLRSAS*SWRWPS
Trigger: GGATGGCCAGCGCCAAGACCAAGACGCACTTCTCAG...AGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp CTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATCTGAGAAGTGCGTCTTaGTCTTGGCGCTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: LPWAVRTTVVDGKLASCHLRSAS*SWRWPS
Trigger: GGATGGCCAGCGCCAAGACCAAGACGCACTTCTCAG...ATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp GGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCAGCCCAGGGCATGTTTaGAAGACTGCTTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GVDSKDSGSQDQWWVSCSSPGHV*KTAFCR
Trigger: TCTGCAGAAAGCAGTCTTCCAAACATGCCCTGGGCT...GGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR CCA 90 bp GAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTTGCCCTTCCACGGCCTaGCTGGGCGGGTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ESISCREMLFRIILNWLVCPSTA*LGGCRV
Trigger: CACCCTGCACCCGCCCAGCCAGGCCGTGGAAGGGCA...AACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp GGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTGGGTTCTTGTCAAGGCTaGGGGTTGAGGGCCCTACAC +
Preference number: 4 (lower is better)
Translates to: GLPRRKWGGYLRLFPFPLGSCQG*GLRALH
Trigger: GTGTAGGGCCCTCAACCCCCAGCCTTGACAAGAACC...CAGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp CTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGCAAAGCCATACCACCCTaGTTGGTTCTTTCAACCCTC +
Preference number: 4 (lower is better)
Translates to: LNWLVVRHPPSSLCPTRCKAIPP*LVLSTL
Trigger: GAGGGTTGAAAGAACCAACCAGGGTGGTATGGCTTT...GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp AACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGGTGGCGTCGGCCTGGTaGCACATCCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: NCHRRMCSPVVLKPCSMVVASAW*HIPVVP
Trigger: TGGGACTACAGGGATGTGCCACCAGGCCGACGCCAC...CACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp TCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCATGCTCCCCTTCCTTaGGCAGTAAGGACAACAGTC +
Preference number: 4 (lower is better)
Translates to: SWGGFQRQWVAGPVVGFMHAPLP*AVRTTV
Trigger: GACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATG...CATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp AGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGTGTGTGTCCCTGATTTTCCTCCTGGGCTCCTGGGGTaGATTCCAAAGACAGTGGGT +
Preference number: 4 (lower is better)
Translates to: SRGREAGFMSWVCVPDFPPGLLG*IPKTVG
Trigger: ACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGG...AGGAAAATCAGGGACACACACCCATGACATGAAGCCAGCTTCCCGTCCACGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521711.5
CDS-3UTR TCA 90 bp TGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGCCTCAGAAGGCCACATaGAGGGGCAGGGCATTAAAG +
Preference number: 4 (lower is better)
Translates to: CLNRAPWCTMYPLEAPHQPQKAT*RGRALK
Trigger: CTTTAATGCCCTGCCCCTTCATGTGGCCTTCTGAGG...CTGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR TCA 90 bp AACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGGAGTGCAGGTGTCGGTaGCAGGCTACGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: NCHRRMCSPVVLKPCSMVECRCR*QATERI
Trigger: GATCCTCTCCGTAGCCTGTCACCGACACCTGCACTC...CACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR TCA 90 bp CAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTGTAGTAGTGCGTGACTaGGTGCAGGTGTCGGTGACA +
Preference number: 4 (lower is better)
Translates to: QWCLNRAPWCTMYPLEAPVVVRD*VQVSVT
Trigger: TGTCACCGACACCTGCACTCAGTCACGCACTACTAC...AGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR TCA 90 bp GGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTGAAGGAGCCCAGCGCTaGGAAGAGCACGTAGCCCGG +
Preference number: 4 (lower is better)
Translates to: GLNHETYWARRLGYPVFTEGAQR*EEHVAR
Trigger: CCGGGCTACGTGCTCTTCTCAGCGCTGGGCTCCTTC...AGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR TCA 90 bp ACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATGAAGGAGCCCAGCGCTaGGAAGAGCACGTAGCCCGG +
Preference number: 4 (lower is better)
Translates to: TVVQDGSRNPINSSCQKNEGAQR*EEHVAR
Trigger: CCGGGCTACGTGCTCTTCTCAGCGCTGGGCTCCTTC...ATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR TCA 90 bp ATGCTCAGGTCTATTGTTTTCTCTTGGGAAAAGCCATACCACCCTGGTTGGTTCGAAGGAGCCCAGCGCTaGGAAGAGCACGTAGCCCGG +
Preference number: 4 (lower is better)
Translates to: MLRSIVFSWEKPYHPGWFEGAQR*EEHVAR
Trigger: CCGGGCTACGTGCTCTTCTCAGCGCTGGGCTCCTTC...GAACCAACCAGGGTGGTATGGCTTTTCCCAAGAGAAAACAATAGACCTGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR TCA 90 bp GGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACACTGTTTCAGAGGGCTTaGAATCAGGGAAGAAAGACC +
Preference number: 4 (lower is better)
Translates to: GRRTSGGFHAPLPWAVRTLFQRA*NQGRKT
Trigger: GGTCTTTCTTCCCTGATTTCAAGCCCTCTGAAACAG...TGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR TCA 90 bp GGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCTCTGAAAGGCCTTTTTaGACTCTTGGCTGGAGCATG +
Preference number: 4 (lower is better)
Translates to: GVDSKDSGSQDQWWVSCSSERPF*TLGWSM
Trigger: CATGCTCCAGCCAAGAGTTCAAAAAGGCCTTTCAGA...GGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR GCA 90 bp CTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTAGGAACAAGCGATGTCGTGCCGGCGGTTGGGTaGAGTTGGAGCTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: LLGQKVGISSFHLGTSDVVPAVG*SWSCRK
Trigger: CTTCCGACAGCTCCAACTGCACCCAACCGCCGGCAC...GACATCGCTTGTTCCTAAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp ATCTCTCTCACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCGTGCCGGCGGTTGGGTaGAGTTGGAGCTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: ISLTVVQDGSRNPINSSCVPAVG*SWSCRK
Trigger: CTTCCGACAGCTCCAACTGCACCCAACCGCCGGCAC...GCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGTGAGAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp AGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGCAGGAACCCAATCTGCCGCCCAGATGTTaGAGAAGACCCTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: RRPGYLSHCSARWEQEPNLPPRC*RRPCRR
Trigger: CCTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAG...ATTGGGTTCCTGCTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp CAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTGCACAGCACATCCACTaGCGCCCAGATGTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: QWCLNRAPWCTMYPLEAPAQHIH*RPDVAE
Trigger: TTCTGCAACATCTGGGCGGCAGTGGATGTGCTGTGC...AGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp ATGATATGCTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAATCCTCGGGGGCCGGCTaGCTCCAGCCGAACAGGGGT +
Preference number: 4 (lower is better)
Translates to: MICFPMVGDQVISLTVVQSSGAG*LQPNRG
Trigger: ACCCCTGTTCGGCTGGAGGCAGCCGGCCCCCGAGGA...TTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp AAGAGCTGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTATGCGGAGCGTCACTTaGTCCGAGTCCGACTTGTCG +
Preference number: 4 (lower is better)
Translates to: KSWPSEKEVGWVPKIIPLMRSVT*SESDLS
Trigger: CGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCAT...AAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCAGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp GGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTGCGTTTTTCCGATGGATaGGGAGCGTCACTTGCTCCG +
Preference number: 4 (lower is better)
Translates to: GLPRRKWGGYLRLFPFPLRFSDG*GASLAP
Trigger: CGGAGCAAGTGACGCTCCGCATCCATCGGAAAAACG...CAGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp ATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTCATCCCGCTGCCTCCTaGCGGGGCGTTTTTCCGATG +
Preference number: 4 (lower is better)
Translates to: MCSPVVLKPCSMVYYVPSHPAAS*RGVFPM
Trigger: CATCGGAAAAACGCCCCGGCAGGAGGCAGCGGGATG...AGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp GAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTCGCTGGCCATCCCGCTaGCTCCTGCCGGGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: ESISCREMLFRIILNWLVRWPSR*LLPGRF
Trigger: AAAACGCCCCGGCAGGAGGCAGCGGGATGGCCAGCG...AACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp GATGATATGCTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCACGCTGGCCATCCCGCTaGCTCCTGCCGGGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: DDMLSNGRRPGYLSHCSARWPSR*LLPGRF
Trigger: AAAACGCCCCGGCAGGAGGCAGCGGGATGGCCAGCG...TGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp GTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAAGCCTCACTGAGAAGTaGGTCTTGGTCTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: VLKPCSMVYYVPSRGPSPSLTEK*VLVLAL
Trigger: CAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGCT...TGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp GCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCAGCATGTTTGGAAGACTaGTTTCTGCAGAGACACTGG +
Preference number: 4 (lower is better)
Translates to: APGVDSKDSGSQDQWWVSACLED*FLQRHW
Trigger: CCAGTGTCTCTGCAGAAAGCAGTCTTCCAAACATGC...TGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR GCA 90 bp TTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCACCATGTCCTTGTGTTaGCCTTCCACGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FRIILNWLVVRHPPSSLCTMSLC*PSTAWL
Trigger: CAGCCAGGCCGTGGAAGGGCAACACAAGGACATGGT...GCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp AGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCACCATGTCCTTGTGTTaGCCTTCCACGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SPVVLKPCSMVYYVPSRGTMSLC*PSTAWL
Trigger: CAGCCAGGCCGTGGAAGGGCAACACAAGGACATGGT...GCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR CCA 90 bp GCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCACTTATTCGTCCTGGCTaGGGGAAGATTCAGCATTCT +
Preference number: 4 (lower is better)
Translates to: APGVDSKDSGSQDQWWVSLIRPG*GKIQHS
Trigger: AGAATGCTGAATCTTCCCCCAGCCAGGACGAATAAG...TGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CCA 90 bp TGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTCTCCCTACCCGAAGCTaGGTGCGAAGATCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: WPSEKEVGWVPKIIPLSSLPTRS*VRRSRR
Trigger: TCTCCTGGATCTTCGCACCCAGCTTCGGGTAGGGAG...AGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp ATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGGGCATTAAAGACATaGCCAGGGGCGCGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: MCSPVVLKPCSMVYYVPSRALKT*PGARGA
Trigger: AGCCCCGCGCGCCCCTGGCCATGTCTTTAATGCCCT...AGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp CCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCGGTGGGAAACAACCCTaGCCAGCCCTGGGAACCCTC +
Preference number: 4 (lower is better)
Translates to: PGLNHETYWARRLGYPVFGGKQP*PALGTL
Trigger: GAGGGTTCCCAGGGCTGGCCAGGGTTGTTTCCCACC...GAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp TTCTGTTTCCCATGGTGGTTTTCGTTGAAGTGGGCACAGAGTGACCAAGAAAGCGGTGGGAAACAACCCTaGCCAGCCCTGGGAACCCTC +
Preference number: 4 (lower is better)
Translates to: FCFPWWFSLKWAQSDQESGGKQP*PALGTL
Trigger: GAGGGTTCCCAGGGCTGGCCAGGGTTGTTTCCCACC...GCTTTCTTGGTCACTCTGTGCCCACTTCAACGAAAACCACCATGGGAAACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp CAGATGATATGCTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCCTGCCAGGTGGGTTTaGCTGGGGGTGAGAGCGCGC +
Preference number: 4 (lower is better)
Translates to: QMICFPMVGDQVISLTVVPARWV*LGVRAR
Trigger: GCGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGG...CACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATATCATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp ACTCCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCCCTGCCAGGTGGGTTTaGCTGGGGGTGAGAGCGCGC +
Preference number: 4 (lower is better)
Translates to: TPALDSSLVIHQYCLKLSPARWV*LGVRAR
Trigger: GCGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGG...GCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp CAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCTCAAAAGGTCTCGGCTaGAGGGAGCCCTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: QGNAVPYHSELVGCETPSSKGLG*REPCQV
Trigger: CACCTGGCAGGGCTCCCTCCAGCCGAGACCTTTTGA...GGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp CTCACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGTCAAAAGGTCTCGGCTaGAGGGAGCCCTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LTVVQDGSRNPINSSCQKSKGLG*REPCQV
Trigger: CACCTGGCAGGGCTCCCTCCAGCCGAGACCTTTTGA...CTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp GTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATATGTATCCGAGAGAAACACCATaGTCCCAGCCGGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: VQDGSRNPINSSCQKNMYPRETP*SQPGPG
Trigger: GCCCGGCCCCGGCTGGGACCATGGTGTTTCTCTCGG...ATACATATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp CAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGCCGAGAGAAACACCATaGTCCCAGCCGGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: QESISCREMLFRIILNWLPRETP*SQPGPG
Trigger: GCCCGGCCCCGGCTGGGACCATGGTGTTTCTCTCGG...CAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp GTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGCGGTTGGGTGCAGTTaGAGCTGTCGGAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: VLKPCSMVYYVPSRGPSPAVGCS*SCRKHF
Trigger: GAAATGCTTCCGACAGCTCCAACTGCACCCAACCGC...TGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp GGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTGCGAGCAGAATGGCCTTaGAAATGTTCACCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: GLPRRKWGGYLRLFPFPLRAEWP*KCSPVP
Trigger: CGGCACCGGTGAACATTTCCAAGGCCATTCTGCTCG...CAGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp TGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGCGAGCAGAATGGCCTTaGAAATGTTCACCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: CLNRAPWCTMYPLEAPHQRAEWP*KCSPVP
Trigger: CGGCACCGGTGAACATTTCCAAGGCCATTCTGCTCG...CTGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp ATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTCACCCCGAGCAGAATaGCCTTGGAAATGTTCACCG +
Preference number: 4 (lower is better)
Translates to: IPKTVGRRTSGGFHAPLPSPRAE*PWKCSP
Trigger: CGGTGAACATTTCCAAGGCCATTCTGCTCGGGGTGA...AGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp GATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGATTAGCTGGGCCTGGTaGCGTCGGCCTGGTGGCACA +
Preference number: 4 (lower is better)
Translates to: DNCHRRMCSPVVLKPCSMISWAW*RRPGGT
Trigger: TGTGCCACCAGGCCGACGCCACCAGGCCCAGCTAAT...CATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp TCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATGGCATGCTCCCCTTCCTTaGGCAGTAAGGACAACAGTC +
Preference number: 4 (lower is better)
Translates to: SLGSKDNSRGREAGFMSWHAPLP*AVRTTV
Trigger: GACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATG...CCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp CCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGCTCTTCTTTTTAATTTaGGCCAACACCAATCCGTTC +
Preference number: 4 (lower is better)
Translates to: PGLLGWIPKTVGRRTSGGLFFLI*ANTNPF
Trigger: GAACGGATTGGTGTTGGCCCAAATTAAAAAGAAGAG...CCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR TCA 90 bp CCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCGAGTGCAGGTGTCGGTaGCAGGCTACGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: PGLNHETYWARRLGYPVFECRCR*QATERI
Trigger: GATCCTCTCCGTAGCCTGTCACCGACACCTGCACTC...GAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR TCA 90 bp TTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCGATGTAGTAGTGCGTaGCTGAGTGCAGGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: FRIILNWLVVRHPPSSLCRCSSA*LSAGVG
Trigger: ACCGACACCTGCACTCAGTCACGCACTACTACATCG...GCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp GGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTGACCCCTCCTCTGGGTaGCGATGGTTGGGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: GLNHETYWARRLGYPVFTDPSSG*RWLGSA
Trigger: TGCGCTACCCAACCATCGTCACCCAGAGGAGGGGTC...AGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR TCA 90 bp TTGTTTTCTCTTGGGAAAAGCCATACCACCCTGGTTGGTTCTTTCAACCCTCTCGACCCCTCCTCTGGGTaGCGATGGTTGGGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: LFSLGKSHTTLVGSFNPLDPSSG*RWLGSA
Trigger: TGCGCTACCCAACCATCGTCACCCAGAGGAGGGGTC...GAGAGGGTTGAAAGAACCAACCAGGGTGGTATGGCTTTTCCCAAGAGAAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR TCA 90 bp GCGAGACTTCGTCTGATTTTCCTGGGTCAGTCCCTATTAAACATGGGTGTTTCAGACCCCTCCTCTGGGTaGCGATGGTTGGGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: ARLRLIFLGQSLLNMGVSDPSSG*RWLGSA
Trigger: TGCGCTACCCAACCATCGTCACCCAGAGGAGGGGTC...TGAAACACCCATGTTTAATAGGGACTGACCCAGGAAAATCAGACGAAGTCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519096.5
CDS-3UTR TCA 90 bp ATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGCCCGGCTCCTCGTTaGTCTGGCAGATGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: MCSPVVLKPCSMVYYVPSSPAPR*SGRWSR
Trigger: ACGAGACCATCTGCCAGATCAACGAGGAGCCGGGCT...AGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR TCA 90 bp TGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGCTTGAGGAGCCTCACTaGGAAGTGCGTCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: CLNRAPWCTMYPLEAPHQLEEPH*EVRLGL
Trigger: AAGACCAAGACGCACTTCTCAGTGAGGCTCCTCAAG...CTGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR TCA 90 bp CTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATCTTGAGGAGCCTCACTaGGAAGTGCGTCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LPWAVRTTVVDGKLASCHLEEPH*EVRLGL
Trigger: AAGACCAAGACGCACTTCTCAGTGAGGCTCCTCAAG...ATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCCTCCCCGTTCTCACTaGGGGAGATGGTGTGGACCT +
Preference number: 4 (lower is better)
Translates to: LKWAQSDQESISCREMLFPPRSH*GRWCGP
Trigger: AGGTCCACACCATCTCCCTCAGTGAGAACGGGGAGG...GAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp GTGAACAGCCTCTATCTTTGCAAGAAATTAACAGCCACACCAACCTCTTGCTCTCTGCGGGGCATCGTTTaGCCGCGTCCACCTGAAGCG +
Preference number: 4 (lower is better)
Translates to: VNSLYLCKKLTATPTSCSLRGIV*PRPPEA
Trigger: CGCTTCAGGTGGACGCGGTCAAACGATGCCCCGCAG...AGAGCAAGAGGTTGGTGTGGCTGTTAATTTCTTGCAAAGATAGAGGCTGTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR TCA 90 bp CCCCATTCCCAGCAGGTCCCCTCTTTGATTGGTCCTGTCTTGTCCTCCAAGAAGCTTTCAACCCTCTCCTaGCCCAAGGATAGAGAACAC +
Preference number: 4 (lower is better)
Translates to: PHSQQVPSLIGPVLSSKKLSTLS*PKDREH
Trigger: GTGTTCTCTATCCTTGGGTCAGGAGAGGGTTGAAAG...CTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp ACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTCTACCCGAAGCTGGGTaGGAAGATCCAGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: TATEECVVQWCLNRAPWCLPEAG*EDPGDS
Trigger: GGAGTCTCCTGGATCTTCGCACCCAGCTTCGGGTAG...ACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp GCGAGACTTCGTCTGATTTTCCTGGGTCAGTCCCTATTAAACATGGGTGTTTCAGTGCCGGCGGTTGGGTaGAGTTGGAGCTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: ARLRLIFLGQSLLNMGVSVPAVG*SWSCRK
Trigger: CTTCCGACAGCTCCAACTGCACCCAACCGCCGGCAC...TGAAACACCCATGTTTAATAGGGACTGACCCAGGAAAATCAGACGAAGTCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519096.5
CDS-3UTR GCA 90 bp AGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGCAGGAACCCAATATGCGGAGCGTCACTTaGTCCGAGTCCGACTTGTCG +
Preference number: 4 (lower is better)
Translates to: RRPGYLSHCSARWEQEPNMRSVT*SESDLS
Trigger: CGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCAT...ATTGGGTTCCTGCTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp ACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATCATCCCGCTGCCTCCTaGCGGGGCGTTTTTCCGATG +
Preference number: 4 (lower is better)
Translates to: TVVQDGSRNPINSSCQKNHPAAS*RGVFPM
Trigger: CATCGGAAAAACGCCCCGGCAGGAGGCAGCGGGATG...ATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp ATGATGCTCAGGTCTATTGTTTTCTCTTGGGAAAAGCCATACCACCCTGGTTGGCATCCCGCTGCCTCCTaGCGGGGCGTTTTTCCGATG +
Preference number: 4 (lower is better)
Translates to: MMLRSIVFSWEKPYHPGWHPAAS*RGVFPM
Trigger: CATCGGAAAAACGCCCCGGCAGGAGGCAGCGGGATG...CCAACCAGGGTGGTATGGCTTTTCCCAAGAGAAAACAATAGACCTGAGCATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp CAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCACCATGTCCTTGTGTTaGCCTTCCACGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QGNAVPYHSELVGCETPSTMSLC*PSTAWL
Trigger: CAGCCAGGCCGTGGAAGGGCAACACAAGGACATGGT...GGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp CAAGGCTCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGAACATGTTGGATTTGTaGCTTAGTCAGATGGATGCT +
Preference number: 4 (lower is better)
Translates to: QGSWAPGVDSKDSGSQDQNMLDL*LSQMDA
Trigger: AGCATCCATCTGACTAAGGCACAAATCCAACATGTT...CTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGAGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp CAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACTGTCTTATTCGTCCTaGCTGGGGGAAGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: QWWVSCSPSLGSKDNSRGLSYSS*LGEDSA
Trigger: TGCTGAATCTTCCCCCAGCCAGGACGAATAAGACAG...TCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CCA 90 bp AGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGCAGGAACCCAATCTCCCTACCCGAAGCTaGGTGCGAAGATCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RRPGYLSHCSARWEQEPNLPTRS*VRRSRR
Trigger: TCTCCTGGATCTTCGCACCCAGCTTCGGGTAGGGAG...ATTGGGTTCCTGCTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp ATGCTCAGGTCTATTGTTTTCTCTTGGGAAAAGCCATACCACCCTGGTTGGTTCAGGGCATTAAAGACATaGCCAGGGGCGCGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: MLRSIVFSWEKPYHPGWFRALKT*PGARGA
Trigger: AGCCCCGCGCGCCCCTGGCCATGTCTTTAATGCCCT...GAACCAACCAGGGTGGTATGGCTTTTCCCAAGAGAAAACAATAGACCTGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp CACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGGTGGGAAACAACCCTaGCCAGCCCTGGGAACCCTC +
Preference number: 4 (lower is better)
Translates to: HRRMCSPVVLKPCSMVYYGGKQP*PALGTL
Trigger: GAGGGTTCCCAGGGCTGGCCAGGGTTGTTTCCCACC...ATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp ATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATGAGCGCGCGCGCGGGTaGGAAACAACCCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: IPSLPSRNSSKLRVCAQNERARG*ETTLAS
Trigger: GCTGGCCAGGGTTGTTTCCCACCCGCGCGCGCGCTC...ATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp GGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATATGTATCTAGTTCCTACCGGTGCCGGCGGTTaGGTGCAGTTGGAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: GSRNPINSSCQKNMYLVPTGAGG*VQLELS
Trigger: CGACAGCTCCAACTGCACCCAACCGCCGGCACCGGT...AGGAACTAGATACATATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp GTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCATCACCCCGAGCAGAATaGCCTTGGAAATGTTCACCG +
Preference number: 4 (lower is better)
Translates to: VLKPCSMVYYVPSRGPSPSPRAE*PWKCSP
Trigger: CGGTGAACATTTCCAAGGCCATTCTGCTCGGGGTGA...TGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp GATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGCTAGGACCTCGAAGATaGCGGAGAAGGGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: DNCHRRMCSPVVLKPCSMLGPRR*RRRAAP
Trigger: CGGTGCTGCCCTTCTCCGCCATCTTCGAGGTCCTAG...CATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp CCTGGGTCAGTCCCTATTAAACATGGGTGTTTCACTTCTCAGCTGTGGATAGCACTAGGACCTCGAAGATaGCGGAGAAGGGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: PGSVPIKHGCFTSQLWIALGPRR*RRRAAP
Trigger: CGGTGCTGCCCTTCTCCGCCATCTTCGAGGTCCTAG...TGCTATCCACAGCTGAGAAGTGAAACACCCATGTTTAATAGGGACTGACCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519096.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TTCTGTTTCCCATGGTGGTTTTCGTTGAAGTGGGCACAGAGTGACCAAGAAAGCCTGGGTGACGATGGTTaGGTAGCGCAGCGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: FCFPWWFSLKWAQSDQESLGDDG*VAQRVA
Trigger: AGCTACCCGCTGCGCTACCCAACCATCGTCACCCAG...GCTTTCTTGGTCACTCTGTGCCCACTTCAACGAAAACCACCATGGGAAACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp TGTTCTCACTACCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATCTGGGTGACGATGGTTaGGTAGCGCAGCGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: CSHYQVLTMKPTGPEGWDLGDDG*VAQRVA
Trigger: AGCTACCCGCTGCGCTACCCAACCATCGTCACCCAG...ATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGGTAGTGAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp GATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGCTGGGTGACGATGGTTaGGTAGCGCAGCGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: DNCHRRMCSPVVLKPCSMLGDDG*VAQRVA
Trigger: AGCTACCCGCTGCGCTACCCAACCATCGTCACCCAG...CATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp ACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATTCTTGGTCTTGGCGCTaGCCATCCCGCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TVVQDGSRNPINSSCQKNSWSWR*PSRCLL
Trigger: CAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGA...ATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp AATGAGGAGCAGCATCCATTCAAAGTGCAGTCAAAGGTAAACCTCACTGCCAAGAGTGCGTCTTGGTCTTaGCGCTGGCCATCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: NEEQHPFKVQSKVNLTAKSASWS*RWPSRC
Trigger: GCAGCGGGATGGCCAGCGCCAAGACCAAGACGCACT...CTTGGCAGTGAGGTTTACCTTTGACTGCACTTTGAATGGATGCTGCTCCTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp CTCACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGCTGAGAAGTGCGTCTTaGTCTTGGCGCTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: LTVVQDGSRNPINSSCQKLRSAS*SWRWPS
Trigger: GGATGGCCAGCGCCAAGACCAAGACGCACTTCTCAG...CTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp TTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGAGCCCAGGGCATGTTTaGAAGACTGCTTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: FHAPLPWAVRTTVVDGKLSPGHV*KTAFCR
Trigger: TCTGCAGAAAGCAGTCTTCCAAACATGCCCTGGGCT...CAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR CCA 90 bp TCTGAGTGGTTGGGGTCTTACCCCACTCCCAACATCCGTCCAGCCCTGCTGTTTAAACGCCATCCGTCTTaGAGATCCTGTAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: SEWLGSYPTPNIRPALLFKRHPS*RSCRRS
Trigger: AGACCTTCTACAGGATCTCCAAGACGGATGGCGTTT...AAACAGCAGGGCTGGACGGATGTTGGGAGTGGGGTAAGACCCCAACCACTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR CCA 90 bp TGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGACTTCGTCCGGGCTGTaGTACAGGAGGATTGGTCTT +
Preference number: 4 (lower is better)
Translates to: CLNRAPWCTMYPLEAPHQTSSGL*YRRIGL
Trigger: AAGACCAATCCTCCTGTACCACAGCCCGGACGAAGT...CTGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR CCA 90 bp ACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAGCTGGCTTCATGTCATaGGTGTGTGTCCCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: TVGRRTSGGFHAPLPWAVAGFMS*VCVPLK
Trigger: TTTTAAAGGGACACACACCCATGACATGAAGCCAGC...TACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519229.5
3UTR CAA 72 bp TGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTaGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: CREMLFRIILNW*VVRHPPSSLCP
Trigger: AGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp CAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCCCTCAGAAGGCCACATaGAGGGGCAGGGCATTAAAG +
Preference number: 4 (lower is better)
Translates to: QGNAVPYHSELVGCETPSPQKAT*RGRALK
Trigger: CTTTAATGCCCTGCCCCTTCATGTGGCCTTCTGAGG...GGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp ACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTGTAGTAGTGCGTGACTaGGTGCAGGTGTCGGTGACA +
Preference number: 4 (lower is better)
Translates to: TATEECVVQWCLNRAPWCVVVRD*VQVSVT
Trigger: TGTCACCGACACCTGCACTCAGTCACGCACTACTAC...ACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR TCA 90 bp CAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGACCCCTCCTCTGGGTaGCGATGGTTGGGTAGCGCA +
Preference number: 4 (lower is better)
Translates to: QESISCREMLFRIILNWLDPSSG*RWLGSA
Trigger: TGCGCTACCCAACCATCGTCACCCAGAGGAGGGGTC...CAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp GCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGTGTGTGCTGTTTCAGAGGGCTTaGAATCAGGGAAGAAAGACC +
Preference number: 4 (lower is better)
Translates to: AVRTTVVDGKLASCHGCVLFQRA*NQGRKT
Trigger: GGTCTTTCTTCCCTGATTTCAAGCCCTCTGAAACAG...CACACACCCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR TCA 90 bp CAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGATCTGAAAGGCCTTTTTaGACTCTTGGCTGGAGCATG +
Preference number: 4 (lower is better)
Translates to: QWWVSCSPSLGSKDNSRGSERPF*TLGWSM
Trigger: CATGCTCCAGCCAAGAGTTCAAAAAGGCCTTTCAGA...TCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR TCA 90 bp CTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTAGGAACAAGCGATGTCGTAGAAGGTCTCTCTTaGTCCCACGGGGATGCGCAC +
Preference number: 4 (lower is better)
Translates to: LLGQKVGISSFHLGTSDVVEGLS*SHGDAH
Trigger: GTGCGCATCCCCGTGGGATCAAGAGAGACCTTCTAC...GACATCGCTTGTTCCTAAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR TCA 90 bp CAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTCAAGGCTGGGGGTTaGGGGCCCTACACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QESISCREMLFRIILNWLVKAGG*GPYTAA
Trigger: TGCTGCTGTGTAGGGCCCTCAACCCCCAGCCTTGAC...CAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp GTGAACAGCCTCTATCTTTGCAAGAAATTAACAGCCACACCAACCTCTTGCTCTGTCAAGGCTGGGGGTTaGGGGCCCTACACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VNSLYLCKKLTATPTSCSVKAGG*GPYTAA
Trigger: TGCTGCTGTGTAGGGCCCTCAACCCCCAGCCTTGAC...AGAGCAAGAGGTTGGTGTGGCTGTTAATTTCTTGCAAAGATAGAGGCTGTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR TCA 90 bp TTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCATGGTGGTTTTCGTTaGAGTGGGCACAGAGTGACC +
Preference number: 4 (lower is better)
Translates to: FRIILNWLVVRHPPSSLCHGGFR*SGHRVT
Trigger: GGTCACTCTGTGCCCACTTCAACGAAAACCACCATG...GCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp TTCTGTTTCCCATGGTGGTTTTCGTTGAAGTGGGCACAGAGTGACCAAGAAAGCCTACCCGAAGCTGGGTaGGAAGATCCAGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: FCFPWWFSLKWAQSDQESLPEAG*EDPGDS
Trigger: GGAGTCTCCTGGATCTTCGCACCCAGCTTCGGGTAG...GCTTTCTTGGTCACTCTGTGCCCACTTCAACGAAAACCACCATGGGAAACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp ATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTGGAAATGTTCACCGGTaGCGGCGGTTGGGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: MCSPVVLKPCSMVYYVPSGNVHR*RRLGAV
Trigger: AACTGCACCCAACCGCCGGCACCGGTGAACATTTCC...AGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp GGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTCTGCCGCCCAGATGTTaGAGAAGACCCTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: GLNHETYWARRLGYPVFTLPPRC*RRPCRR
Trigger: CCTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAG...AGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp TTCTGTTTCCCATGGTGGTTTTCGTTGAAGTGGGCACAGAGTGACCAAGAAAGCTATGACCAGGGAGAGTaGCCAGACGCAGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: FCFPWWFSLKWAQSDQESYDQGE*PDAEQS
Trigger: GCTCTGCTCTGCGTCTGGGCACTCTCCCTGGTCATA...GCTTTCTTGGTCACTCTGTGCCCACTTCAACGAAAACCACCATGGGAAACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp CCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCATGCGGAGCGTCACTTaGTCCGAGTCCGACTTGTCG +
Preference number: 4 (lower is better)
Translates to: PGLNHETYWARRLGYPVFMRSVT*SESDLS
Trigger: CGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCAT...GAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp GTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTCATCCCGCTGCCTCCTaGCGGGGCGTTTTTCCGATG +
Preference number: 4 (lower is better)
Translates to: VLTMKPTGPEGWDIQFSLHPAAS*RGVFPM
Trigger: CATCGGAAAAACGCCCCGGCAGGAGGCAGCGGGATG...AAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp CAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCAAGCAGCCGACCACGATaGCCAGCGTTTTGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: QVLTMKPTGPEGWDIQFSSSRPR*PAFWPL
Trigger: AAGCGGCCAAAACGCTGGGCATCGTGGTCGGCTGCT...TGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp AAGATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCAAGCAGCCGACCACGATaGCCAGCGTTTTGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: KITATEECVVQWCLNRAPSSRPR*PAFWPL
Trigger: AAGCGGCCAAAACGCTGGGCATCGTGGTCGGCTGCT...TGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp CACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATAGCAGCCGACCACGATaGCCAGCGTTTTGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: HRRMCSPVVLKPCSMVYYSSRPR*PAFWPL
Trigger: AAGCGGCCAAAACGCTGGGCATCGTGGTCGGCTGCT...ATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp GATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGCTCCCTACCCGAAGCTaGGTGCGAAGATCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: DNCHRRMCSPVVLKPCSMLPTRS*VRRSRR
Trigger: TCTCCTGGATCTTCGCACCCAGCTTCGGGTAGGGAG...CATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp CAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCATCAAAAGGTCTCGGCTaGAGGGAGCCCTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: QVLTMKPTGPEGWDIQFSSKGLG*REPCQV
Trigger: CACCTGGCAGGGCTCCCTCCAGCCGAGACCTTTTGA...TGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp AACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGGCGGTTGGGTGCAGTTaGAGCTGTCGGAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: NCHRRMCSPVVLKPCSMVAVGCS*SCRKHF
Trigger: GAAATGCTTCCGACAGCTCCAACTGCACCCAACCGC...CACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp GGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCACGAGCAGAATGGCCTTaGAAATGTTCACCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: GHRVTKKALAAGKCCSVSRAEWP*KCSPVP
Trigger: CGGCACCGGTGAACATTTCCAAGGCCATTCTGCTCG...TGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp ACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATCTGGGTGACGATGGTTaGGTAGCGCAGCGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: TVVQDGSRNPINSSCQKNLGDDG*VAQRVA
Trigger: AGCTACCCGCTGCGCTACCCAACCATCGTCACCCAG...ATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp CTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTAGGAACAAGCGATGTCGGCTCCTCGTTGATCTaGCAGATGGTCTCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LLGQKVGISSFHLGTSDVGSSLI*QMVSSS
Trigger: CGAGGACGAGACCATCTGCCAGATCAACGAGGAGCC...GACATCGCTTGTTCCTAAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp GATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGGCTCCTCGTTGATCTaGCAGATGGTCTCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: DNCHRRMCSPVVLKPCSMGSSLI*QMVSSS
Trigger: CGAGGACGAGACCATCTGCCAGATCAACGAGGAGCC...CATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp TTTTCACTTAGGAACAAGCGATGTCACATAATACATAGCCATAGCTTCCAGCTGCCCGGCTCTCCCTCTTaGCCACCACGTAGACGCGGC +
Preference number: 4 (lower is better)
Translates to: FSLRNKRCHIIHSHSFQLPGSPS*PPRRRG
Trigger: GCCGCGTCTACGTGGTGGCCAAGAGGGAGAGCCGGG...CAGCTGGAAGCTATGGCTATGTATTATGTGACATCGCTTGTTCCTAAGTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp GCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCATTAGTCCCGGCTCTCCCTCTTaGCCACCACGTAGACGCGGC +
Preference number: 4 (lower is better)
Translates to: ALDSSLVIHQYCLKLSISPGSPS*PPRRRG
Trigger: GCCGCGTCTACGTGGTGGCCAAGAGGGAGAGCCGGG...ACTAATGCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp CCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCGGGGCGTTTTTCCGATaGATGCGGAGCGTCACTTGC +
Preference number: 4 (lower is better)
Translates to: PGLNHETYWARRLGYPVFGAFFR*MRSVTC
Trigger: GCAAGTGACGCTCCGCATCCATCGGAAAAACGCCCC...GAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp ATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTGGGGCGTTTTTCCGATaGATGCGGAGCGTCACTTGC +
Preference number: 4 (lower is better)
Translates to: MCSPVVLKPCSMVYYVPSGAFFR*MRSVTC
Trigger: GCAAGTGACGCTCCGCATCCATCGGAAAAACGCCCC...AGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp GTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTAGTGCGTCTTGGTCTTaGCGCTGGCCATCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VLTMKPTGPEGWDIQFSLSASWS*RWPSRC
Trigger: GCAGCGGGATGGCCAGCGCCAAGACCAAGACGCACT...AAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCTGAGAAGTGCGTCTTaGTCTTGGCGCTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: LKWAQSDQESISCREMLFLRSAS*SWRWPS
Trigger: GGATGGCCAGCGCCAAGACCAAGACGCACTTCTCAG...GAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp TTTTCACTTAGGAACAAGCGATGTCACATAATACATAGCCATAGCTTCCAGCTGCTTCCACGGCCTGGCTaGGCGGGTGCAGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: FSLRNKRCHIIHSHSFQLLPRPG*AGAGCS
Trigger: GCTACACCCTGCACCCGCCCAGCCAGGCCGTGGAAG...CAGCTGGAAGCTATGGCTATGTATTATGTGACATCGCTTGTTCCTAAGTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp CGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTGGTACAGGAGGATTaGTCTTTGGACACTGTAATC +
Preference number: 4 (lower is better)
Translates to: RRTSGGFHAPLPWAVRTTVVQED*SLDTVI
Trigger: GATTACAGTGTCCAAAGACCAATCCTCCTGTACCAC...TGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR CCA 90 bp CTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCCCTACCCGCTGCAAATTCTGTTTCCCATaGTGGTTTTCGTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LNWLVVRHPPSSLCPTRCKFCFP*WFSLKW
Trigger: CCACTTCAACGAAAACCACCATGGGAAACAGAATTT...GCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp GTGAACAGCCTCTATCTTTGCAAGAAATTAACAGCCACACCAACCTCTTGCTCTCTGCCTGCTCTTCTCTaGAGGCGGAGAGGGGACCGT +
Preference number: 4 (lower is better)
Translates to: VNSLYLCKKLTATPTSCSLPALL*RRRGDR
Trigger: ACGGTCCCCTCTCCGCCTCCAGAGAAGAGCAGGCAG...AGAGCAAGAGGTTGGTGTGGCTGTTAATTTCTTGCAAAGATAGAGGCTGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp CAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTAATACAAAAATTAGCTaGGCCTGGTGGCGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: QWCLNRAPWCTMYPLEAPNTKIS*AWWRRP
Trigger: AGGCCGACGCCACCAGGCCCAGCTAATTTTTGTATT...AGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp AAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGTGTGTGTCCCTGCTGGCTTCATGTCATaGGTGTGTGTCCCTGATTTT +
Preference number: 4 (lower is better)
Translates to: KDNSRGREAGFMSWVCVPAGFMS*VCVPDF
Trigger: AAAATCAGGGACACACACCCATGACATGAAGCCAGC...AGGGACACACACCCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521711.5
CDS-3UTR TCA 90 bp CCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCGTAGTAGTGCGTGACTaGGTGCAGGTGTCGGTGACA +
Preference number: 4 (lower is better)
Translates to: PGLNHETYWARRLGYPVFVVVRD*VQVSVT
Trigger: TGTCACCGACACCTGCACTCAGTCACGCACTACTAC...GAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR TCA 90 bp ACTCCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCAGCCCGGCTCCTCGTTaGTCTGGCAGATGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: TPALDSSLVIHQYCLKLSSPAPR*SGRWSR
Trigger: ACGAGACCATCTGCCAGATCAACGAGGAGCCGGGCT...GCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR TCA 90 bp CTTCGTCTGATTTTCCTGGGTCAGTCCCTATTAAACATGGGTGTTTCACTTCTCAGCCCGGCTCCTCGTTaGTCTGGCAGATGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: LRLIFLGQSLLNMGVSLLSPAPR*SGRWSR
Trigger: ACGAGACCATCTGCCAGATCAACGAGGAGCCGGGCT...GAGAAGTGAAACACCCATGTTTAATAGGGACTGACCCAGGAAAATCAGACGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519096.5
CDS-3UTR TCA 90 bp ATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATGAAGGAGCCCAGCGCTaGGAAGAGCACGTAGCCCGG +
Preference number: 4 (lower is better)
Translates to: IPSLPSRNSSKLRVCAQNEGAQR*EEHVAR
Trigger: CCGGGCTACGTGCTCTTCTCAGCGCTGGGCTCCTTC...ATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp CTCACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGCTTGAGGAGCCTCACTaGGAAGTGCGTCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LTVVQDGSRNPINSSCQKLEEPH*EVRLGL
Trigger: AAGACCAAGACGCACTTCTCAGTGAGGCTCCTCAAG...CTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR TCA 90 bp GTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCTCTGAAAGGCCTTTTTaGACTCTTGGCTGGAGCATG +
Preference number: 4 (lower is better)
Translates to: VQWCLNRAPWCTMYPLEASERPF*TLGWSM
Trigger: CATGCTCCAGCCAAGAGTTCAAAAAGGCCTTTCAGA...GGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR TCA 90 bp ACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTGAGGCAGGCAGATCATaGGGTCAAGAGATCGAGATC +
Preference number: 4 (lower is better)
Translates to: TATEECVVQWCLNRAPWCEAGRS*GQEIEI
Trigger: GATCTCGATCTCTTGACCTCATGATCTGCCTGCCTC...ACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp TCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCAGAATTACGAGAATCTaGTTTTCCGCGCTGTCTTAT +
Preference number: 4 (lower is better)
Translates to: SCSPSLGSKDNSRGREAGRITRI*FSALSY
Trigger: ATAAGACAGCGCGGAAAAGCAGATTCTCGTAATTCT...GCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR GCA 90 bp CACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATCTACCCGAAGCTGGGTaGGAAGATCCAGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: HRRMCSPVVLKPCSMVYYLPEAG*EDPGDS
Trigger: GGAGTCTCCTGGATCTTCGCACCCAGCTTCGGGTAG...ATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp TGGGAAGGTAAGATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCTGCCGCCCAGATGTTaGAGAAGACCCTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: WEGKITATEECVVQWCLNLPPRC*RRPCRR
Trigger: CCTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAG...GTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTTACCTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp CCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCGCACAGCACATCCACTaGCGCCCAGATGTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: PGLNHETYWARRLGYPVFAQHIH*RPDVAE
Trigger: TTCTGCAACATCTGGGCGGCAGTGGATGTGCTGTGC...GAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCGCACAGCACATCCACTaGCGCCCAGATGTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LKWAQSDQESISCREMLFAQHIH*RPDVAE
Trigger: TTCTGCAACATCTGGGCGGCAGTGGATGTGCTGTGC...GAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp GATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGCACAGCACATCCACTaGCGCCCAGATGTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: DNCHRRMCSPVVLKPCSMAQHIH*RPDVAE
Trigger: TTCTGCAACATCTGGGCGGCAGTGGATGTGCTGTGC...CATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp GGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTATGACCAGGGAGAGTaGCCAGACGCAGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GLNHETYWARRLGYPVFTYDQGE*PDAEQS
Trigger: GCTCTGCTCTGCGTCTGGGCACTCTCCCTGGTCATA...AGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp AAGATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATATGACCAGGGAGAGTaGCCAGACGCAGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: KITATEECVVQWCLNRAPYDQGE*PDAEQS
Trigger: GCTCTGCTCTGCGTCTGGGCACTCTCCCTGGTCATA...TGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp CTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTAGGAACAAGCGATGTCAGCCTCACTGAGAAGTaGGTCTTGGTCTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: LLGQKVGISSFHLGTSDVSLTEK*VLVLAL
Trigger: CAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGCT...GACATCGCTTGTTCCTAAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp TACCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTACCATGTCCTTGTGTTaGCCTTCCACGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: YQVLTMKPTGPEGWDIQFTMSLC*PSTAWL
Trigger: CAGCCAGGCCGTGGAAGGGCAACACAAGGACATGGT...AAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp CAGACTTCAGTAGAGCGGGTTCTCAAGTTGAGGATCCCTCTCATTTCCTCATTAACCATGTCCTTGTGTTaGCCTTCCACGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QTSVERVLKLRIPLISSLTMSLC*PSTAWL
Trigger: CAGCCAGGCCGTGGAAGGGCAACACAAGGACATGGT...TAATGAGGAAATGAGAGGGATCCTCAACTTGAGAACCCGCTCTACTGAAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR GCA 90 bp CCCCATTCCCAGCAGGTCCCCTCTTTGATTGGTCCTGTCTTGTCCTCCAAGAAGTATTCCCCTTTCCTCTaGATCTTTCCTGTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: PHSQQVPSLIGPVLSSKKYSPFL*IFPVLD
Trigger: GTCTAGGACAGGAAAGATGCAGAGGAAAGGGGAATA...CTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp CCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCATTTTCGGTCCCGGGAGCTaGCTGCCTGCTCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PALDSSLVIHQYCLKLSIFGPGS*LPALLW
Trigger: CCAGAGAAGAGCAGGCAGGCAGCTCCCGGGACCGAA...AATGCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp AACTCCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCTACAGGTTGGGCGCTaGTCCTGGCCCGCAGTTACC +
Preference number: 4 (lower is better)
Translates to: NSCVRQFFGDPSVLSEAKLQVGR*SWPAVT
Trigger: GGTAACTGCGGGCCAGGAGCAGCGCCCAACCTGTAG...CTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp CGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTTCATCCTTGCAGCTaGTTCTCAAAATCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RRTSGGFHAPLPWAVRTTVHPCS*FSKSRR
Trigger: TCTTCTGGATTTTGAGAAGCAGCTGCAAGGATGAAC...TGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR CCA 90 bp AAGAGCTGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTCTGTCTTATTCGTCCTaGCTGGGGGAAGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: KSWPSEKEVGWVPKIIPLLSYSS*LGEDSA
Trigger: TGCTGAATCTTCCCCCAGCCAGGACGAATAAGACAG...AAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCAGCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp AGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCTGTCTTATTCGTCCTaGCTGGGGGAAGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: SPVVLKPCSMVYYVPSRGLSYSS*LGEDSA
Trigger: TGCTGAATCTTCCCCCAGCCAGGACGAATAAGACAG...GCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp ATATGCTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATAGGGCATTAAAGACATaGCCAGGGGCGCGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: ICFPMVGDQVISLTVVQDRALKT*PGARGA
Trigger: AGCCCCGCGCGCCCCTGGCCATGTCTTTAATGCCCT...ATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp ATGATATGCTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGGTGGGAAACAACCCTaGCCAGCCCTGGGAACCCTC +
Preference number: 4 (lower is better)
Translates to: MICFPMVGDQVISLTVVQGGKQP*PALGTL
Trigger: GAGGGTTCCCAGGGCTGGCCAGGGTTGTTTCCCACC...TTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp TGGGAAGGTAAGATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACTCAAAAGGTCTCGGCTaGAGGGAGCCCTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: WEGKITATEECVVQWCLNSKGLG*REPCQV
Trigger: CACCTGGCAGGGCTCCCTCCAGCCGAGACCTTTTGA...GTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTTACCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp TTCTGTTTCCCATGGTGGTTTTCGTTGAAGTGGGCACAGAGTGACCAAGAAAGCGCGGTTGGGTGCAGTTaGAGCTGTCGGAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: FCFPWWFSLKWAQSDQESAVGCS*SCRKHF
Trigger: GAAATGCTTCCGACAGCTCCAACTGCACCCAACCGC...GCTTTCTTGGTCACTCTGTGCCCACTTCAACGAAAACCACCATGGGAAACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp CTCACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGTCACCCCGAGCAGAATaGCCTTGGAAATGTTCACCG +
Preference number: 4 (lower is better)
Translates to: LTVVQDGSRNPINSSCQKSPRAE*PWKCSP
Trigger: CGGTGAACATTTCCAAGGCCATTCTGCTCGGGGTGA...CTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp TTCCCTCAAGCTGAGAAATTGGATGTATCAGAAAGGGTGGAGTTTCAGGACTTGCTAGGACCTCGAAGATaGCGGAGAAGGGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: FPQAEKLDVSERVEFQDLLGPRR*RRRAAP
Trigger: CGGTGCTGCCCTTCTCCGCCATCTTCGAGGTCCTAG...CAAGTCCTGAAACTCCACCCTTTCTGATACATCCAATTTCTCAGCTTGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp TGGGAAGGTAAGATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCTAGGACCTCGAAGATaGCGGAGAAGGGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: WEGKITATEECVVQWCLNLGPRR*RRRAAP
Trigger: CGGTGCTGCCCTTCTCCGCCATCTTCGAGGTCCTAG...GTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTTACCTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp CTTCGTCTGATTTTCCTGGGTCAGTCCCTATTAAACATGGGTGTTTCACTTCTCCTGGGTGACGATGGTTaGGTAGCGCAGCGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: LRLIFLGQSLLNMGVSLLLGDDG*VAQRVA
Trigger: AGCTACCCGCTGCGCTACCCAACCATCGTCACCCAG...GAGAAGTGAAACACCCATGTTTAATAGGGACTGACCCAGGAAAATCAGACGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519096.5
CDS-3UTR CCA 90 bp TTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCAGCCCAGGGCATGTTTaGAAGACTGCTTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: FRIILNWLVVRHPPSSLCSPGHV*KTAFCR
Trigger: TCTGCAGAAAGCAGTCTTCCAAACATGCCCTGGGCT...GCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp TGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCAAGTGTCCTTCCACGGCCTGGCTaGGCGGGTGCAGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: WICALVRWMLDKEVNPSVLPRPG*AGAGCS
Trigger: GCTACACCCTGCACCCGCCCAGCCAGGCCGTGGAAG...GACACTTGGATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR CCA 90 bp AATGAGGAGCAGCATCCATTCAAAGTGCAGTCAAAGGTAAACCTCACTGCCAAGAAAGGCAGGGACCGATaGTTGGGTAGCGCAGCGCTA +
Preference number: 4 (lower is better)
Translates to: NEEQHPFKVQSKVNLTAKKGRDR*LGSAAL
Trigger: TAGCGCTGCGCTACCCAACCATCGGTCCCTGCCTTT...CTTGGCAGTGAGGTTTACCTTTGACTGCACTTTGAATGGATGCTGCTCCTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp AGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCAATACAAAAATTAGCTaGGCCTGGTGGCGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: SPVVLKPCSMVYYVPSRGNTKIS*AWWRRP
Trigger: AGGCCGACGCCACCAGGCCCAGCTAATTTTTGTATT...GCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp TCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGCACTCATCCCTGCCCTaGTTTCAGTTTTTAATCTCT +
Preference number: 4 (lower is better)
Translates to: SKDSGSQDQWWVSCSPSLHSSLP*FQFLIS
Trigger: AGAGATTAAAAACTGAAACCAGGGCAGGGATGAGTG...CAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521711.5
CDS-3UTR CCA 90 bp AGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGTGTGTGTCCCTGATTTTCCTTTCACTTCTCAGCTGTaGATAGCACACTCATCCCTG +
Preference number: 4 (lower is better)
Translates to: SRGREAGFMSWVCVPDFPFTSQL*IAHSSL
Trigger: CAGGGATGAGTGTGCTATCCACAGCTGAGAAGTGAA...AGGAAAATCAGGGACACACACCCATGACATGAAGCCAGCTTCCCGTCCACGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521711.5
CDS-3UTR TCA 90 bp ATATGCTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGAGTGCAGGTGTCGGTaGCAGGCTACGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: ICFPMVGDQVISLTVVQDECRCR*QATERI
Trigger: GATCCTCTCCGTAGCCTGTCACCGACACCTGCACTC...ATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR TCA 90 bp ACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATGTAGTAGTGCGTGACTaGGTGCAGGTGTCGGTGACA +
Preference number: 4 (lower is better)
Translates to: TVVQDGSRNPINSSCQKNVVVRD*VQVSVT
Trigger: TGTCACCGACACCTGCACTCAGTCACGCACTACTAC...ATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR TCA 90 bp CAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACGATGTAGTAGTGCGTaGCTGAGTGCAGGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: QVLTMKPTGPEGWDIQFSRCSSA*LSAGVG
Trigger: ACCGACACCTGCACTCAGTCACGCACTACTACATCG...TGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR TCA 90 bp GCGAGACTTCGTCTGATTTTCCTGGGTCAGTCCCTATTAAACATGGGTGTTTCACGATGTAGTAGTGCGTaGCTGAGTGCAGGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: ARLRLIFLGQSLLNMGVSRCSSA*LSAGVG
Trigger: ACCGACACCTGCACTCAGTCACGCACTACTACATCG...TGAAACACCCATGTTTAATAGGGACTGACCCAGGAAAATCAGACGAAGTCTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519096.5
CDS-3UTR TCA 90 bp TGTTCTCACTACCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATCTTGAGGAGCCTCACTaGGAAGTGCGTCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: CSHYQVLTMKPTGPEGWDLEEPH*EVRLGL
Trigger: AAGACCAAGACGCACTTCTCAGTGAGGCTCCTCAAG...ATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGGTAGTGAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR TCA 90 bp CAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCATCTCCCGGGAGAACTTaGGGAGCCTCACTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: QVLTMKPTGPEGWDIQFSSPGRT*GASLRS
Trigger: ACTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGA...TGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR TCA 90 bp ACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATTCTCCCGGGAGAACTTaGGGAGCCTCACTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: TVVQDGSRNPINSSCQKNSPGRT*GASLRS
Trigger: ACTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGA...ATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR TCA 90 bp CACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATTCTCCCGGGAGAACTTaGGGAGCCTCACTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: HRRMCSPVVLKPCSMVYYSPGRT*GASLRS
Trigger: ACTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGA...ATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR TCA 90 bp ACTCCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCGTAGAAGGTCTCTCTTaGTCCCACGGGGATGCGCAC +
Preference number: 4 (lower is better)
Translates to: TPALDSSLVIHQYCLKLSVEGLS*SHGDAH
Trigger: GTGCGCATCCCCGTGGGATCAAGAGAGACCTTCTAC...GCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR TCA 90 bp CTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTAGGAACAAGCGATGTCTGGAGATCAGCATTCTaGACCCTTTCTCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: LLGQKVGISSFHLGTSDVWRSAF*TLSPRW
Trigger: CCACCGTGGAGAAAGGGTTCAGAATGCTGATCTCCA...GACATCGCTTGTTCCTAAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR TCA 90 bp TCAGGACTTGCTCTAAAAATAATGTGTCTGGATCTCGGCCACCATCTTAATGCTTCCTTTTGCACCCGCTaGCTCACCCCTCCACCACTG +
Preference number: 4 (lower is better)
Translates to: SGLALKIMCLDLGHHLNASFCTR*LTPPPL
Trigger: CAGTGGTGGAGGGGTGAGTCAGCGGGTGCAAAAGGA...AGCATTAAGATGGTGGCCGAGATCCAGACACATTATTTTTAGAGCAAGTCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR TCA 90 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCAGTTACCTACATTTTaGGCTGCCCCACCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LKWAQSDQESISCREMLFQLPTF*AAPPKA
Trigger: AGCCTTCGGTGGGGCAGCTCAAAATGTAGGTAACTG...GAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp TCTGAGTGGTTGGGGTCTTACCCCACTCCCAACATCCGTCCAGCCCTGCTGTTTAGACTCCTTGCAACATaGAATTCCAGAATTACGAGA +
Preference number: 4 (lower is better)
Translates to: SEWLGSYPTPNIRPALLFRLLAT*NSRITR
Trigger: TCTCGTAATTCTGGAATTGCATGTTGCAAGGAGTCT...AAACAGCAGGGCTGGACGGATGTTGGGAGTGGGGTAAGACCCCAACCACTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp GGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCAGACTCCTTGCAACATaGAATTCCAGAATTACGAGA +
Preference number: 4 (lower is better)
Translates to: GFQRQWVAGPVVGFMLPFRLLAT*NSRITR
Trigger: TCTCGTAATTCTGGAATTGCATGTTGCAAGGAGTCT...GAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR GCA 90 bp GTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATATGTATCTACCCGAAGCTGGGTaGGAAGATCCAGGAGACTCC +
Preference number: 4 (lower is better)
Translates to: VQDGSRNPINSSCQKNMYLPEAG*EDPGDS
Trigger: GGAGTCTCCTGGATCTTCGCACCCAGCTTCGGGTAG...ATACATATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp CACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATATTCATGGGCTGGAGGGAGCCCTaGCAGGTGGGTTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HFHQEIAPNLECVLKIFMGWREP*QVGLAG
Trigger: CCCAGCCAAACCCACCTGGCAGGGCTCCCTCCAGCC...CATGAATATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp TCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATAGTGCCGGCGGTTGGGTaGAGTTGGAGCTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: SPHFHQEIAPNLECVLKIVPAVG*SWSCRK
Trigger: CTTCCGACAGCTCCAACTGCACCCAACCGCCGGCAC...TATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp GATATGCTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGAGGAAATGTTCACCGGTaGCGGCGGTTGGGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: DMLSNGRRPGYLSHCSARGNVHR*RRLGAV
Trigger: AACTGCACCCAACCGCCGGCACCGGTGAACATTTCC...TCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp GATATGCTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATATGACCAGGGAGAGTaGCCAGACGCAGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: DMLSNGRRPGYLSHCSARYDQGE*PDAEQS
Trigger: GCTCTGCTCTGCGTCTGGGCACTCTCCCTGGTCATA...TCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp GTGAACAGCCTCTATCTTTGCAAGAAATTAACAGCCACACCAACCTCTTGCTCTTATGACCAGGGAGAGTaGCCAGACGCAGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VNSLYLCKKLTATPTSCSYDQGE*PDAEQS
Trigger: GCTCTGCTCTGCGTCTGGGCACTCTCCCTGGTCATA...AGAGCAAGAGGTTGGTGTGGCTGTTAATTTCTTGCAAAGATAGAGGCTGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp ACTCCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCATGCGGAGCGTCACTTaGTCCGAGTCCGACTTGTCG +
Preference number: 4 (lower is better)
Translates to: TPALDSSLVIHQYCLKLSMRSVT*SESDLS
Trigger: CGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCAT...GCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp CTTCGTCTGATTTTCCTGGGTCAGTCCCTATTAAACATGGGTGTTTCACTTCTCATGCGGAGCGTCACTTaGTCCGAGTCCGACTTGTCG +
Preference number: 4 (lower is better)
Translates to: LRLIFLGQSLLNMGVSLLMRSVT*SESDLS
Trigger: CGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCAT...GAGAAGTGAAACACCCATGTTTAATAGGGACTGACCCAGGAAAATCAGACGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519096.5
CDS-3UTR GCA 90 bp TACCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTCGTTTTTCCGATGGATaGGGAGCGTCACTTGCTCCG +
Preference number: 4 (lower is better)
Translates to: YQVLTMKPTGPEGWDIQFRFSDG*GASLAP
Trigger: CGGAGCAAGTGACGCTCCGCATCCATCGGAAAAACG...AAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp TGCAGAAAAGTAGGAATAGATGAAGTTGAGTTGACTACTGGATCTTTTACCAGACGCTGGCCATCCCGCTaGCTCCTGCCGGGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: CRKVGIDEVELTTGSFTRRWPSR*LLPGRF
Trigger: AAAACGCCCCGGCAGGAGGCAGCGGGATGGCCAGCG...TCTGGTAAAAGATCCAGTAGTCAACTCAACTTCATCTATTCCTACTTTTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp CACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATAGCCTCACTGAGAAGTaGGTCTTGGTCTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: HRRMCSPVVLKPCSMVYYSLTEK*VLVLAL
Trigger: CAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGCT...ATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp ATGATATGCTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAAGCAGCCGACCACGATaGCCAGCGTTTTGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: MICFPMVGDQVISLTVVQSSRPR*PAFWPL
Trigger: AAGCGGCCAAAACGCTGGGCATCGTGGTCGGCTGCT...TTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp TGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGTGGAAGACTGCTTTCTaGAGAGACACTGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: CLNRAPWCTMYPLEAPHQWKTAF*RDTGFS
Trigger: TGAGAATCCAGTGTCTCTGCAGAAAGCAGTCTTCCA...CTGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR GCA 90 bp ACTCCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCCTGTGCCCTACCCGCTaGCTGATGAGTTGGGTCTAC +
Preference number: 4 (lower is better)
Translates to: TPALDSSLVIHQYCLKLSLCPTR*LMSWVY
Trigger: GTAGACCCAACTCATCAGGCAGCGGGTAGGGCACAG...GCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp CAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTGTGGTGCTTAAACCGTaGTCCATGGTGTACTATGTA +
Preference number: 4 (lower is better)
Translates to: QWCLNRAPWCTMYPLEAPVVLKP*SMVYYV
Trigger: TACATAGTACACCATGGAGCACGGTTTAAGCACCAC...AGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp AAGGCTCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTTTTCCTCTTTCCCTTTaGATTCATGATCATTCCTTA +
Preference number: 4 (lower is better)
Translates to: KAPGLLGWIPKTVGRRTSFPLSL*IHDHSL
Trigger: TAAGGAATGATCATGAATGCAAAGGGAAAGAGGAAA...ACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR GCA 90 bp CTCACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGCAACCCCAGCACTGCTaGATGGTGAACTGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: LTVVQDGSRNPINSSCQKQPQHC*MVNWLF
Trigger: AAACAACCAGTTCACCATGCAGCAGTGCTGGGGTTG...CTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp TTCCCTCAAGCTGAGAAATTGGATGTATCAGAAAGGGTGGAGTTTCAGGACTTGCTCCCTACCCGAAGCTaGGTGCGAAGATCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: FPQAEKLDVSERVEFQDLLPTRS*VRRSRR
Trigger: TCTCCTGGATCTTCGCACCCAGCTTCGGGTAGGGAG...CAAGTCCTGAAACTCCACCCTTTCTGATACATCCAATTTCTCAGCTTGAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp GGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTGCGGTTGGGTGCAGTTaGAGCTGTCGGAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: GLNHETYWARRLGYPVFTAVGCS*SCRKHF
Trigger: GAAATGCTTCCGACAGCTCCAACTGCACCCAACCGC...AGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp GCGAGACTTCGTCTGATTTTCCTGGGTCAGTCCCTATTAAACATGGGTGTTTCACGAGCAGAATGGCCTTaGAAATGTTCACCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: ARLRLIFLGQSLLNMGVSRAEWP*KCSPVP
Trigger: CGGCACCGGTGAACATTTCCAAGGCCATTCTGCTCG...TGAAACACCCATGTTTAATAGGGACTGACCCAGGAAAATCAGACGAAGTCTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519096.5
CDS-3UTR CCA 90 bp ATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTTCACCCCGAGCAGAATaGCCTTGGAAATGTTCACCG +
Preference number: 4 (lower is better)
Translates to: MCSPVVLKPCSMVYYVPSSPRAE*PWKCSP
Trigger: CGGTGAACATTTCCAAGGCCATTCTGCTCGGGGTGA...AGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp GATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATATGTATCTAGTTCTAGGACCTCGAAGATaGCGGAGAAGGGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: DGSRNPINSSCQKNMYLVLGPRR*RRRAAP
Trigger: CGGTGCTGCCCTTCTCCGCCATCTTCGAGGTCCTAG...AACTAGATACATATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp GAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTGGGGCGTTTTTCCGATaGATGCGGAGCGTCACTTGC +
Preference number: 4 (lower is better)
Translates to: ESISCREMLFRIILNWLVGAFFR*MRSVTC
Trigger: GCAAGTGACGCTCCGCATCCATCGGAAAAACGCCCC...AACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp TTTTCACTTAGGAACAAGCGATGTCACATAATACATAGCCATAGCTTCCAGCTGTCTTGGTCTTGGCGCTaGCCATCCCGCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: FSLRNKRCHIIHSHSFQLSWSWR*PSRCLL
Trigger: CAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGA...CAGCTGGAAGCTATGGCTATGTATTATGTGACATCGCTTGTTCCTAAGTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp CAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGCTGAGAAGTGCGTCTTaGTCTTGGCGCTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: QESISCREMLFRIILNWLLRSAS*SWRWPS
Trigger: GGATGGCCAGCGCCAAGACCAAGACGCACTTCTCAG...CAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp ACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTAGCCCAGGGCATGTTTaGAAGACTGCTTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TATEECVVQWCLNRAPWCSPGHV*KTAFCR
Trigger: TCTGCAGAAAGCAGTCTTCCAAACATGCCCTGGGCT...ACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR CCA 90 bp AAGAGCTGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTCTGAGGGAGATGGTGTaGACCTTAATGGTTGGAACT +
Preference number: 4 (lower is better)
Translates to: KSWPSEKEVGWVPKIIPLLREMV*TLMVGT
Trigger: AGTTCCAACCATTAAGGTCCACACCATCTCCCTCAG...AAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCAGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp AAGAGCTGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTCTTCCGAGAAGGAAGTaGGGTGGGTACCTAAGATTA +
Preference number: 4 (lower is better)
Translates to: KSWPSEKEVGWVPKIIPLLPRRK*GGYLRL
Trigger: TAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAG...AAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCAGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp ACTCCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCCGCTGCCTGATGAGTTaGGTCTACCACCCACCCCAT +
Preference number: 4 (lower is better)
Translates to: TPALDSSLVIHQYCLKLSRCLMS*VYHPPH
Trigger: ATGGGGTGGGTGGTAGACCCAACTCATCAGGCAGCG...GCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp TACCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTTCCCCTCCGGGCTGTaGTACAGGAGGATTGGTCTT +
Preference number: 4 (lower is better)
Translates to: YQVLTMKPTGPEGWDIQFFPSGL*YRRIGL
Trigger: AAGACCAATCCTCCTGTACCACAGCCCGGAGGGGAA...AAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp AAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCTGTGCCTTAGTCAGATaGATGCTTGATAAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: KDSGSQDQWWVSCSPSLGCALVR*MLDKEV
Trigger: TACTTCTTTATCAAGCATCCATCTGACTAAGGCACA...GCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp GCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGTGCCTTAGTCAGATaGATGCTTGATAAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: APGVDSKDSGSQDQWWVSCALVR*MLDKEV
Trigger: TACTTCTTTATCAAGCATCCATCTGACTAAGGCACA...TGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp AAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCGTAACAGTAACATGTTaGATTTGTGCCTTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: KDSGSQDQWWVSCSPSLGVTVTC*ICALVR
Trigger: TCTGACTAAGGCACAAATCCAACATGTTACTGTTAC...GCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp CCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCCACTCATCCCTGCCCTaGTTTCAGTTTTTAATCTCT +
Preference number: 4 (lower is better)
Translates to: PVVLKPCSMVYYVPSRGPHSSLP*FQFLIS
Trigger: AGAGATTAAAAACTGAAACCAGGGCAGGGATGAGTG...GGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000519096.5
CDS-3UTR TCA 90 bp GATATGCTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGACCTCAGAAGGCCACATaGAGGGGCAGGGCATTAAAG +
Preference number: 4 (lower is better)
Translates to: DMLSNGRRPGYLSHCSARPQKAT*RGRALK
Trigger: CTTTAATGCCCTGCCCCTTCATGTGGCCTTCTGAGG...TCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR TCA 90 bp CTTCGTCTGATTTTCCTGGGTCAGTCCCTATTAAACATGGGTGTTTCACTTCTCCCTCAGAAGGCCACATaGAGGGGCAGGGCATTAAAG +
Preference number: 4 (lower is better)
Translates to: LRLIFLGQSLLNMGVSLLPQKAT*RGRALK
Trigger: CTTTAATGCCCTGCCCCTTCATGTGGCCTTCTGAGG...GAGAAGTGAAACACCCATGTTTAATAGGGACTGACCCAGGAAAATCAGACGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519096.5
CDS-3UTR TCA 90 bp TGGGAAGGTAAGATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGATGTAGTAGTGCGTaGCTGAGTGCAGGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: WEGKITATEECVVQWCLNRCSSA*LSAGVG
Trigger: ACCGACACCTGCACTCAGTCACGCACTACTACATCG...GTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTTACCTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR TCA 90 bp TTTTCACTTAGGAACAAGCGATGTCACATAATACATAGCCATAGCTTCCAGCTGAGCCCGGCTCCTCGTTaGTCTGGCAGATGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: FSLRNKRCHIIHSHSFQLSPAPR*SGRWSR
Trigger: ACGAGACCATCTGCCAGATCAACGAGGAGCCGGGCT...CAGCTGGAAGCTATGGCTATGTATTATGTGACATCGCTTGTTCCTAAGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR TCA 90 bp AAGATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCACTTGAGGAGCCTCACTaGGAAGTGCGTCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: KITATEECVVQWCLNRAPLEEPH*EVRLGL
Trigger: AAGACCAAGACGCACTTCTCAGTGAGGCTCCTCAAG...TGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR TCA 90 bp CAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGTCTCCCGGGAGAACTTaGGGAGCCTCACTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: QESISCREMLFRIILNWLSPGRT*GASLRS
Trigger: ACTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGA...CAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp GGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCACTGTTTCAGAGGGCTTaGAATCAGGGAAGAAAGACC +
Preference number: 4 (lower is better)
Translates to: GHRVTKKALAAGKCCSVSLFQRA*NQGRKT
Trigger: GGTCTTTCTTCCCTGATTTCAAGCCCTCTGAAACAG...TGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp GGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATCTGAAAGGCCTTTTTaGACTCTTGGCTGGAGCATG +
Preference number: 4 (lower is better)
Translates to: GHRVTKKALAAGKCCSVSSERPF*TLGWSM
Trigger: CATGCTCCAGCCAAGAGTTCAAAAAGGCCTTTCAGA...TGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp CCCCATTCCCAGCAGGTCCCCTCTTTGATTGGTCCTGTCTTGTCCTCCAAGAAGCTTTTGGATTGTGCATaGAATTCTGTTTCCCATGGT +
Preference number: 4 (lower is better)
Translates to: PHSQQVPSLIGPVLSSKKLLDCA*NSVSHG
Trigger: ACCATGGGAAACAGAATTTCATGCACAATCCAAAAG...CTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp TGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTATGTCTTTAAGCTCCTaGACCGCTGTCACTTTACCT +
Preference number: 4 (lower is better)
Translates to: WPSEKEVGWVPKIIPLSSMSLSS*TAVTLP
Trigger: AGGTAAAGTGACAGCGGTTCAGGAGCTTAAAGACAT...AGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp CCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCAGACTCCTTGCAACATaGAATTCCAGAATTACGAGA +
Preference number: 4 (lower is better)
Translates to: PVVLKPCSMVYYVPSRGPRLLAT*NSRITR
Trigger: TCTCGTAATTCTGGAATTGCATGTTGCAAGGAGTCT...GGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp GTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATATGTATGCACAGCACATCCACTaGCGCCCAGATGTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: VQDGSRNPINSSCQKNMYAQHIH*RPDVAE
Trigger: TTCTGCAACATCTGGGCGGCAGTGGATGTGCTGTGC...ATACATATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp TCAGTCCCTATTAAACATGGGTGTTTCACTTCTCAGCTGTGGATAGCACACTCAGCACAGCACATCCACTaGCGCCCAGATGTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SVPIKHGCFTSQLWIAHSAQHIH*RPDVAE
Trigger: TTCTGCAACATCTGGGCGGCAGTGGATGTGCTGTGC...TGAGTGTGCTATCCACAGCTGAGAAGTGAAACACCCATGTTTAATAGGGACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519096.5
ENST00000521711.5
CDS-3UTR GCA 90 bp GGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATATGTATCTAGTTCCTCGTTTTTCCGATGGATaGGGAGCGTCACTTGCTCCG +
Preference number: 4 (lower is better)
Translates to: GSRNPINSSCQKNMYLVPRFSDG*GASLAP
Trigger: CGGAGCAAGTGACGCTCCGCATCCATCGGAAAAACG...AGGAACTAGATACATATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp TCAGTCCCTATTAAACATGGGTGTTTCACTTCTCAGCTGTGGATAGCACACTCACGTTTTTCCGATGGATaGGGAGCGTCACTTGCTCCG +
Preference number: 4 (lower is better)
Translates to: SVPIKHGCFTSQLWIAHSRFSDG*GASLAP
Trigger: CGGAGCAAGTGACGCTCCGCATCCATCGGAAAAACG...TGAGTGTGCTATCCACAGCTGAGAAGTGAAACACCCATGTTTAATAGGGACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519096.5
ENST00000521711.5
CDS-3UTR GCA 90 bp TGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCAAGTGTCCATCCCGCTGCCTCCTaGCGGGGCGTTTTTCCGATG +
Preference number: 4 (lower is better)
Translates to: WICALVRWMLDKEVNPSVHPAAS*RGVFPM
Trigger: CATCGGAAAAACGCCCCGGCAGGAGGCAGCGGGATG...GACACTTGGATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp CAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGAGCCTCACTGAGAAGTaGGTCTTGGTCTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: QESISCREMLFRIILNWLSLTEK*VLVLAL
Trigger: CAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGCT...CAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp CAGATGATATGCTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGAGCCTCACTGAGAAGTaGGTCTTGGTCTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: QMICFPMVGDQVISLTVVSLTEK*VLVLAL
Trigger: CAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGCT...CACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATATCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp GTGGCTGATGATTCTCAATTAACTTTTAAGAATGAAATGGGGGAGGGAGGTTGTAGCAGCCGACCACGATaGCCAGCGTTTTGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: VADDSQLTFKNEMGEGGCSSRPR*PAFWPL
Trigger: AAGCGGCCAAAACGCTGGGCATCGTGGTCGGCTGCT...ACAACCTCCCTCCCCCATTTCATTCTTAAAAGTTAATTGAGAATCATCAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR GCA 90 bp GTAGAGCGGGTTCTCAAGTTGAGGATCCCTCTCATTTCCTCATTAGCCAGGCTGTGGAAGACTGCTTTCTaGAGAGACACTGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: VERVLKLRIPLISSLARLWKTAF*RDTGFS
Trigger: TGAGAATCCAGTGTCTCTGCAGAAAGCAGTCTTCCA...CAGCCTGGCTAATGAGGAAATGAGAGGGATCCTCAACTTGAGAACCCGCTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR GCA 90 bp CTCTATCTTTGCAAGAAATTAACAGCCACACCAACCTCTTGCTCTTTAAAGATAGTCCCGGGAGCTGCCTaGCTGCTCTTCTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LYLCKKLTATPTSCSLKIVPGAA*LLFSGG
Trigger: GCCTCCAGAGAAGAGCAGGCAGGCAGCTCCCGGGAC...TATCTTTAAAGAGCAAGAGGTTGGTGTGGCTGTTAATTTCTTGCAAAGATAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp AAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGTGTGTGTCCCTAACATGTTGGATTTGTaGCTTAGTCAGATGGATGCT +
Preference number: 4 (lower is better)
Translates to: KDNSRGREAGFMSWVCVPNMLDL*LSQMDA
Trigger: AGCATCCATCTGACTAAGGCACAAATCCAACATGTT...AGGGACACACACCCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp GATATGCTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGACTCCAACCCCAGCACTaGTGCATGGTGAACTGGTTG +
Preference number: 4 (lower is better)
Translates to: DMLSNGRRPGYLSHCSARLQPQH*CMVNWL
Trigger: CAACCAGTTCACCATGCAGCAGTGCTGGGGTTGGAG...TCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp CTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGCTGTCTTATTCGTCCTaGCTGGGGGAAGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: LSNGRRPGYLSHCSARWELSYSS*LGEDSA
Trigger: TGCTGAATCTTCCCCCAGCCAGGACGAATAAGACAG...CTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp ATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTCTGTCTTATTCGTCCTaGCTGGGGGAAGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: MCSPVVLKPCSMVYYVPSLSYSS*LGEDSA
Trigger: TGCTGAATCTTCCCCCAGCCAGGACGAATAAGACAG...AGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp CAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGCGGTTGGGTGCAGTTaGAGCTGTCGGAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: QESISCREMLFRIILNWLAVGCS*SCRKHF
Trigger: GAAATGCTTCCGACAGCTCCAACTGCACCCAACCGC...CAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp TGCAGAAAAGTAGGAATAGATGAAGTTGAGTTGACTACTGGATCTTTTACCAGAACCGGTGCCGGCGGTTaGGTGCAGTTGGAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: CRKVGIDEVELTTGSFTRTGAGG*VQLELS
Trigger: CGACAGCTCCAACTGCACCCAACCGCCGGCACCGGT...TCTGGTAAAAGATCCAGTAGTCAACTCAACTTCATCTATTCCTACTTTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp GTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTCGAGCAGAATGGCCTTaGAAATGTTCACCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: VLTMKPTGPEGWDIQFSLRAEWP*KCSPVP
Trigger: CGGCACCGGTGAACATTTCCAAGGCCATTCTGCTCG...AAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp GTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATATGTATCGAGCAGAATGGCCTTaGAAATGTTCACCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: VQDGSRNPINSSCQKNMYRAEWP*KCSPVP
Trigger: CGGCACCGGTGAACATTTCCAAGGCCATTCTGCTCG...ATACATATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp TCAGTCCCTATTAAACATGGGTGTTTCACTTCTCAGCTGTGGATAGCACACTCACGAGCAGAATGGCCTTaGAAATGTTCACCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: SVPIKHGCFTSQLWIAHSRAEWP*KCSPVP
Trigger: CGGCACCGGTGAACATTTCCAAGGCCATTCTGCTCG...TGAGTGTGCTATCCACAGCTGAGAAGTGAAACACCCATGTTTAATAGGGACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519096.5
ENST00000521711.5
CDS-3UTR CCA 90 bp GGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTCACCCCGAGCAGAATaGCCTTGGAAATGTTCACCG +
Preference number: 4 (lower is better)
Translates to: GLNHETYWARRLGYPVFTSPRAE*PWKCSP
Trigger: CGGTGAACATTTCCAAGGCCATTCTGCTCGGGGTGA...AGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp TTTTCACTTAGGAACAAGCGATGTCACATAATACATAGCCATAGCTTCCAGCTGCTAGGACCTCGAAGATaGCGGAGAAGGGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: FSLRNKRCHIIHSHSFQLLGPRR*RRRAAP
Trigger: CGGTGCTGCCCTTCTCCGCCATCTTCGAGGTCCTAG...CAGCTGGAAGCTATGGCTATGTATTATGTGACATCGCTTGTTCCTAAGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp TCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATACTGGGTGACGATGGTTaGGTAGCGCAGCGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: SPHFHQEIAPNLECVLKILGDDG*VAQRVA
Trigger: AGCTACCCGCTGCGCTACCCAACCATCGTCACCCAG...TATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp ATATGCTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGCTCCTCGTTGATCTaGCAGATGGTCTCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: ICFPMVGDQVISLTVVQDGSSLI*QMVSSS
Trigger: CGAGGACGAGACCATCTGCCAGATCAACGAGGAGCC...ATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp AACTCCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGGGGGCGTTTTTCCGATaGATGCGGAGCGTCACTTGC +
Preference number: 4 (lower is better)
Translates to: NSCVRQFFGDPSVLSEAKGAFFR*MRSVTC
Trigger: GCAAGTGACGCTCCGCATCCATCGGAAAAACGCCCC...CTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp TGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTGTGGTACAGGAGGATTaGTCTTTGGACACTGTAATC +
Preference number: 4 (lower is better)
Translates to: WPSEKEVGWVPKIIPLSSVVQED*SLDTVI
Trigger: GATTACAGTGTCCAAAGACCAATCCTCCTGTACCAC...AGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp AATGAGGAGCAGCATCCATTCAAAGTGCAGTCAAAGGTAAACCTCACTGCCAAGTCCTCCAAGAAGAGCTaGCCTTCCGAGAAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: NEEQHPFKVQSKVNLTAKSSKKS*PSEKEV
Trigger: CACTTCCTTCTCGGAAGGCCAGCTCTTCTTGGAGGA...CTTGGCAGTGAGGTTTACCTTTGACTGCACTTTGAATGGATGCTGCTCCTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp ACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTGAATGTGTAGTCCAGTaGTGCTTAAACCGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TATEECVVQWCLNRAPWCECVVQ*CLNRAP
Trigger: TGGAGCACGGTTTAAGCACCACTGGACTACACATTC...ACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp ATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTTGGGCTGGGTGTCTATaGGAAGGTAAGATAACTGCC +
Preference number: 4 (lower is better)
Translates to: MCSPVVLKPCSMVYYVPSWAGCL*EGKITA
Trigger: GGCAGTTATCTTACCTTCCCATAGACACCCAGCCCA...AGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp CTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTTGTGCCTTAGTCAGATaGATGCTTGATAAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: LGWIPKTVGRRTSGGFHACALVR*MLDKEV
Trigger: TACTTCTTTATCAAGCATCCATCTGACTAAGGCACA...AGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR CAA 72 bp TTCCAAGTTCAGACTTCAGTAGAGCGGGTTCTCAAGTaGAGGATCCCTCTCATTTCCTCATTAGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FQVQTSVERVLK*RIPLISSLARL
Trigger: CAGCCTGGCTAATGAGGAAATGAGAGGGATCCTCAACTTGAGAACCCGCTCTACTGAAGTCTGAACTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR TCA 90 bp GATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATATGTATCTAGTTCGATGTAGTAGTGCGTaGCTGAGTGCAGGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: DGSRNPINSSCQKNMYLVRCSSA*LSAGVG
Trigger: ACCGACACCTGCACTCAGTCACGCACTACTACATCG...AACTAGATACATATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR TCA 90 bp CACGTGGCTGATGATTCTCAATTAACTTTTAAGAATGAAATGGGGGAGGGAGGTCGATGTAGTAGTGCGTaGCTGAGTGCAGGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: HVADDSQLTFKNEMGEGGRCSSA*LSAGVG
Trigger: ACCGACACCTGCACTCAGTCACGCACTACTACATCG...ACCTCCCTCCCCCATTTCATTCTTAAAAGTTAATTGAGAATCATCAGCCACGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR TCA 90 bp CCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCCTGTTTCAGAGGGCTTaGAATCAGGGAAGAAAGACC +
Preference number: 4 (lower is better)
Translates to: PGLNHETYWARRLGYPVFLFQRA*NQGRKT
Trigger: GGTCTTTCTTCCCTGATTTCAAGCCCTCTGAAACAG...GAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR TCA 90 bp CTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTAGGAACAAGCGATGTCTCTGAAAGGCCTTTTTaGACTCTTGGCTGGAGCATG +
Preference number: 4 (lower is better)
Translates to: LLGQKVGISSFHLGTSDVSERPF*TLGWSM
Trigger: CATGCTCCAGCCAAGAGTTCAAAAAGGCCTTTCAGA...GACATCGCTTGTTCCTAAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp TTTTCACTTAGGAACAAGCGATGTCACATAATACATAGCCATAGCTTCCAGCTGGGAAATGTTCACCGGTaGCGGCGGTTGGGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: FSLRNKRCHIIHSHSFQLGNVHR*RRLGAV
Trigger: AACTGCACCCAACCGCCGGCACCGGTGAACATTTCC...CAGCTGGAAGCTATGGCTATGTATTATGTGACATCGCTTGTTCCTAAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp CCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCATTAGCCTCACTGAGAAGTaGGTCTTGGTCTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PALDSSLVIHQYCLKLSISLTEK*VLVLAL
Trigger: CAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGCT...AATGCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp CAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCTGGAAGACTGCTTTCTaGAGAGACACTGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: QGNAVPYHSELVGCETPSWKTAF*RDTGFS
Trigger: TGAGAATCCAGTGTCTCTGCAGAAAGCAGTCTTCCA...GGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp TTCTGTTTCCCATGGTGGTTTTCGTTGAAGTGGGCACAGAGTGACCAAGAAAGCGCATGTTTGGAAGACTaGTTTCTGCAGAGACACTGG +
Preference number: 4 (lower is better)
Translates to: FCFPWWFSLKWAQSDQESACLED*FLQRHW
Trigger: CCAGTGTCTCTGCAGAAAGCAGTCTTCCAAACATGC...GCTTTCTTGGTCACTCTGTGCCCACTTCAACGAAAACCACCATGGGAAACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp GTGGCTGATGATTCTCAATTAACTTTTAAGAATGAAATGGGGGAGGGAGGTTGTACCATGTCCTTGTGTTaGCCTTCCACGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VADDSQLTFKNEMGEGGCTMSLC*PSTAWL
Trigger: CAGCCAGGCCGTGGAAGGGCAACACAAGGACATGGT...ACAACCTCCCTCCCCCATTTCATTCTTAAAAGTTAATTGAGAATCATCAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380582.7
CDS-3UTR GCA 90 bp ATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATCTGTGCCCTACCCGCTaGCTGATGAGTTGGGTCTAC +
Preference number: 4 (lower is better)
Translates to: IPSLPSRNSSKLRVCAQNLCPTR*LMSWVY
Trigger: GTAGACCCAACTCATCAGGCAGCGGGTAGGGCACAG...ATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp GGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTCCTCATTTGCAGACTaGCTAGGTCTCCAGCTACCT +
Preference number: 4 (lower is better)
Translates to: GLNHETYWARRLGYPVFTSSFAD*LGLQLP
Trigger: AGGTAGCTGGAGACCTAGGCAGTCTGCAAATGAGGA...AGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp ATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATCCCACCGAAGGCTCCTaGTCTCTCCAGCTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: IPSLPSRNSSKLRVCAQNPTEGS*SLQLLG
Trigger: TCCTAGAAGCTGGAGAGAGCAGGAGCCTTCGGTGGG...ATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp AAGATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGTGTAGTCCAGTGGTaGTTAAACCGTGCTCCATGG +
Preference number: 4 (lower is better)
Translates to: KITATEECVVQWCLNRAPCVVQW*LNRAPW
Trigger: CCATGGAGCACGGTTTAAGCACCACTGGACTACACA...TGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp CACGTGGCTGATGATTCTCAATTAACTTTTAAGAATGAAATGGGGGAGGGAGGTCAGTGGTGGGTTTCATaGTCCCCTTCCTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: HVADDSQLTFKNEMGEGGQWWVS*SPSLGS
Trigger: ACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTG...ACCTCCCTCCCCCATTTCATTCTTAAAAGTTAATTGAGAATCATCAGCCACGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CCA 90 bp GATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGCTTATTCGTCCTGGCTaGGGGAAGATTCAGCATTCT +
Preference number: 4 (lower is better)
Translates to: DNCHRRMCSPVVLKPCSMLIRPG*GKIQHS
Trigger: AGAATGCTGAATCTTCCCCCAGCCAGGACGAATAAG...CATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp GATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATATGTATCTAGTTGCGGTTGGGTGCAGTTaGAGCTGTCGGAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: DGSRNPINSSCQKNMYLVAVGCS*SCRKHF
Trigger: GAAATGCTTCCGACAGCTCCAACTGCACCCAACCGC...AACTAGATACATATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp TGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCAAGTGTCCTGGGTGACGATGGTTaGGTAGCGCAGCGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: WICALVRWMLDKEVNPSVLGDDG*VAQRVA
Trigger: AGCTACCCGCTGCGCTACCCAACCATCGTCACCCAG...GACACTTGGATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp CACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATATTCATGAGTGCGTCTTGGTCTTaGCGCTGGCCATCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: HFHQEIAPNLECVLKIFMSASWS*RWPSRC
Trigger: GCAGCGGGATGGCCAGCGCCAAGACCAAGACGCACT...CATGAATATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp TTTTCACTTAGGAACAAGCGATGTCACATAATACATAGCCATAGCTTCCAGCTGCTGAGAAGTGCGTCTTaGTCTTGGCGCTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: FSLRNKRCHIIHSHSFQLLRSAS*SWRWPS
Trigger: GGATGGCCAGCGCCAAGACCAAGACGCACTTCTCAG...CAGCTGGAAGCTATGGCTATGTATTATGTGACATCGCTTGTTCCTAAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp ATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATCGCTGCCTGATGAGTTaGGTCTACCACCCACCCCAT +
Preference number: 4 (lower is better)
Translates to: IPSLPSRNSSKLRVCAQNRCLMS*VYHPPH
Trigger: ATGGGGTGGGTGGTAGACCCAACTCATCAGGCAGCG...ATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp CAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCTTCTGTTTCCCATGGTaGTTTTCGTTGAAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: QGNAVPYHSELVGCETPSFCFPW*FSLKWA
Trigger: TGCCCACTTCAACGAAAACCACCATGGGAAACAGAA...GGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp TTCTGTTTCCCATGGTGGTTTTCGTTGAAGTGGGCACAGAGTGACCAAGAAAGCCCTCACTCTCATCTTTaGGAAATGAGGAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: FCFPWWFSLKWAQSDQESPHSHL*EMRSSI
Trigger: GATGCTGCTCCTCATTTCCCAAAGATGAGAGTGAGG...GCTTTCTTGGTCACTCTGTGCCCACTTCAACGAAAACCACCATGGGAAACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp CACGTGGCTGATGATTCTCAATTAACTTTTAAGAATGAAATGGGGGAGGGAGGTGGATTCCAAAGACAGTaGGTCGCAGGACCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: HVADDSQLTFKNEMGEGGGFQRQ*VAGPVV
Trigger: CACCACTGGTCCTGCGACCCACTGTCTTTGGAATCC...ACCTCCCTCCCCCATTTCATTCTTAAAAGTTAATTGAGAATCATCAGCCACGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR TCA 90 bp ACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCAGAGTGCAGGTGTCGGTaGCAGGCTACGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: TCWICALVRWMLDKEVNPECRCR*QATERI
Trigger: GATCCTCTCCGTAGCCTGTCACCGACACCTGCACTC...TGGATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR TCA 90 bp ATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATGTAGTAGTGCGTGACTaGGTGCAGGTGTCGGTGACA +
Preference number: 4 (lower is better)
Translates to: IPSLPSRNSSKLRVCAQNVVVRD*VQVSVT
Trigger: TGTCACCGACACCTGCACTCAGTCACGCACTACTAC...ATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp GCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCATTAGTGTAGTAGTGCGTGACTaGGTGCAGGTGTCGGTGACA +
Preference number: 4 (lower is better)
Translates to: ALDSSLVIHQYCLKLSISVVVRD*VQVSVT
Trigger: TGTCACCGACACCTGCACTCAGTCACGCACTACTAC...ACTAATGCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR TCA 90 bp ATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATTCTCCCGGGAGAACTTaGGGAGCCTCACTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: IPSLPSRNSSKLRVCAQNSPGRT*GASLRS
Trigger: ACTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGA...ATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp TTGTTTTCTCTTGGGAAAAGCCATACCACCCTGGTTGGTTCTTTCAACCCTCTCCTGTTTCAGAGGGCTTaGAATCAGGGAAGAAAGACC +
Preference number: 4 (lower is better)
Translates to: LFSLGKSHTTLVGSFNPLLFQRA*NQGRKT
Trigger: GGTCTTTCTTCCCTGATTTCAAGCCCTCTGAAACAG...GAGAGGGTTGAAAGAACCAACCAGGGTGGTATGGCTTTTCCCAAGAGAAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR TCA 90 bp AAGATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCACTGTTTCAGAGGGCTTaGAATCAGGGAAGAAAGACC +
Preference number: 4 (lower is better)
Translates to: KITATEECVVQWCLNRAPLFQRA*NQGRKT
Trigger: GGTCTTTCTTCCCTGATTTCAAGCCCTCTGAAACAG...TGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR TCA 90 bp AATAAAATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTGTAGAAGGTCTCTCTTaGTCCCACGGGGATGCGCAC +
Preference number: 4 (lower is better)
Translates to: NKIPSLPSRNSSKLRVCAVEGLS*SHGDAH
Trigger: GTGCGCATCCCCGTGGGATCAAGAGAGACCTTCTAC...AGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGATTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp AAGAGCTGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTCTTTTGGATTGTGCATaGAATTCTGTTTCCCATGGT +
Preference number: 4 (lower is better)
Translates to: KSWPSEKEVGWVPKIIPLLLDCA*NSVSHG
Trigger: ACCATGGGAAACAGAATTTCATGCACAATCCAAAAG...AAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCAGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp CACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATATTCATGGTGTGGAATATGTGCTaGGACCCAGGAGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: HFHQEIAPNLECVLKIFMVWNMC*DPGGCG
Trigger: CCCGCAGCCTCCTGGGTCTCAGCACATATTCCACAC...CATGAATATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR TCA 90 bp TGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTTCTGGAACAGGTAAGTaGTTTGTCAAGAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: WPSEKEVGWVPKIIPLSSSGTGK*FVKKGF
Trigger: AAAGCCTTTCTTGACAAATCACTTACCTGTTCCAGA...AGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp AATAAAATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTGGAAATGTTCACCGGTaGCGGCGGTTGGGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: NKIPSLPSRNSSKLRVCAGNVHR*RRLGAV
Trigger: AACTGCACCCAACCGCCGGCACCGGTGAACATTTCC...AGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGATTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp TGCAGAAAAGTAGGAATAGATGAAGTTGAGTTGACTACTGGATCTTTTACCAGACTGCCGCCCAGATGTTaGAGAAGACCCTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: CRKVGIDEVELTTGSFTRLPPRC*RRPCRR
Trigger: CCTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAG...TCTGGTAAAAGATCCAGTAGTCAACTCAACTTCATCTATTCCTACTTTTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp CCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCTGGAAGACTGCTTTCTaGAGAGACACTGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: PGLNHETYWARRLGYPVFWKTAF*RDTGFS
Trigger: TGAGAATCCAGTGTCTCTGCAGAAAGCAGTCTTCCA...GAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp TACCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTGCATGTTTGGAAGACTaGTTTCTGCAGAGACACTGG +
Preference number: 4 (lower is better)
Translates to: YQVLTMKPTGPEGWDIQFACLED*FLQRHW
Trigger: CCAGTGTCTCTGCAGAAAGCAGTCTTCCAAACATGC...AAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp AAGAGCTGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTGTTCCCCAAGCTCTTaGAGAAAAGTAGGAATAGAT +
Preference number: 4 (lower is better)
Translates to: KSWPSEKEVGWVPKIIPLCSPSS*RKVGID
Trigger: ATCTATTCCTACTTTTCTGCAAGAGCTTGGGGAACA...AAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCAGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp ATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTACATCCGTCCAGCCCTaGTGTTTTTCTTTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: MCSPVVLKPCSMVYYVPSTSVQP*CFSFFC
Trigger: GCAAAAGAAAGAAAAACAGCAGGGCTGGACGGATGT...AGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp CTTCGTCTGATTTTCCTGGGTCAGTCCCTATTAAACATGGGTGTTTCACTTCTCTGTGTAGTCCAGTGGTaGTTAAACCGTGCTCCATGG +
Preference number: 4 (lower is better)
Translates to: LRLIFLGQSLLNMGVSLLCVVQW*LNRAPW
Trigger: CCATGGAGCACGGTTTAAGCACCACTGGACTACACA...GAGAAGTGAAACACCCATGTTTAATAGGGACTGACCCAGGAAAATCAGACGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519096.5
CDS-3UTR CCA 90 bp CACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATATTCATGCTAGGACCTCGAAGATaGCGGAGAAGGGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: HFHQEIAPNLECVLKIFMLGPRR*RRRAAP
Trigger: CGGTGCTGCCCTTCTCCGCCATCTTCGAGGTCCTAG...CATGAATATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp GTAACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATTCTTGGTCTTGGCGCTaGCCATCCCGCTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VTCWICALVRWMLDKEVNSWSWR*PSRCLL
Trigger: CAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGA...ATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TACCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTAAACGCCATCCGTCTTaGAGATCCTGTAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: YQVLTMKPTGPEGWDIQFKRHPS*RSCRRS
Trigger: AGACCTTCTACAGGATCTCCAAGACGGATGGCGTTT...AAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp GAGGAGCAGCATCCATTCAAAGTGCAGTCAAAGGTAAACCTCACTGCCAAGTTTAAACGCCATCCGTCTTaGAGATCCTGTAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: EEQHPFKVQSKVNLTAKFKRHPS*RSCRRS
Trigger: AGACCTTCTACAGGATCTCCAAGACGGATGGCGTTT...AAACTTGGCAGTGAGGTTTACCTTTGACTGCACTTTGAATGGATGCTGCTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp ACGGGAAGCTGGCTTCATGTCATGGGTGTGTGTCCCTTTAAAACACAAGGTAGAGTGGTACAGGAGGATTaGTCTTTGGACACTGTAATC +
Preference number: 4 (lower is better)
Translates to: TGSWLHVMGVCPFKTQGRVVQED*SLDTVI
Trigger: GATTACAGTGTCCAAAGACCAATCCTCCTGTACCAC...TCTACCTTGTGTTTTAAAGGGACACACACCCATGACATGAAGCCAGCTTCCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR CCA 90 bp CCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCATTTTCTCACCCGGGCTGTaGTACAGGAGGATTGGTCTT +
Preference number: 4 (lower is better)
Translates to: PALDSSLVIHQYCLKLSIFSPGL*YRRIGL
Trigger: AAGACCAATCCTCCTGTACCACAGCCCGGGTGAGAA...AATGCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp ATGATGCTCAGGTCTATTGTTTTCTCTTGGGAAAAGCCATACCACCCTGGTTGGCTTCCGAGAAGGAAGTaGGGTGGGTACCTAAGATTA +
Preference number: 4 (lower is better)
Translates to: MMLRSIVFSWEKPYHPGWLPRRK*GGYLRL
Trigger: TAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAG...CCAACCAGGGTGGTATGGCTTTTCCCAAGAGAAAACAATAGACCTGAGCATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTaGTTGGTTGTGAGACACCCT +
Preference number: 4 (lower is better)
Translates to: LKWAQSDQESISCREMLFRIILN*LVVRHP
Trigger: AGGGTGTCTCACAACCAACCAGTTCAGAATGATACG...GAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp TTCTGTTTCCCATGGTGGTTTTCGTTGAAGTGGGCACAGAGTGACCAAGAAAGCTTCTGTTTCCCATGGTaGTTTTCGTTGAAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: FCFPWWFSLKWAQSDQESFCFPW*FSLKWA
Trigger: TGCCCACTTCAACGAAAACCACCATGGGAAACAGAA...GCTTTCTTGGTCACTCTGTGCCCACTTCAACGAAAACCACCATGGGAAACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp AACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTTAAACCGTGCTCCATaGTGTACTATGTACCCTCTA +
Preference number: 4 (lower is better)
Translates to: NCHRRMCSPVVLKPCSMVLNRAP*CTMYPL
Trigger: TAGAGGGTACATAGTACACCATGGAGCACGGTTTAA...CACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CCA 90 bp TGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCAAGTGTCTCGCAGGACCAGTGGTaGGTTTCATGCTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: WICALVRWMLDKEVNPSVSQDQW*VSCSPS
Trigger: GGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGA...GACACTTGGATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp GCGAGACTTCGTCTGATTTTCCTGGGTCAGTCCCTATTAAACATGGGTGTTTCATTCACTTCTCAGCTGTaGATAGCACACTCATCCCTG +
Preference number: 4 (lower is better)
Translates to: ARLRLIFLGQSLLNMGVSFTSQL*IAHSSL
Trigger: CAGGGATGAGTGTGCTATCCACAGCTGAGAAGTGAA...TGAAACACCCATGTTTAATAGGGACTGACCCAGGAAAATCAGACGAAGTCTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519096.5
CDS-3UTR TCA 90 bp CAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCTTTTGTAAGCCATGTTaGAATGGCTGTGCAGTAAGT +
Preference number: 4 (lower is better)
Translates to: QGNAVPYHSELVGCETPSFCKPC*NGCAVS
Trigger: ACTTACTGCACAGCCATTTCAACATGGCTTACAAAA...GGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp AACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGAGAATTACGAGAATCTaGTTTTCCGCGCTGTCTTAT +
Preference number: 4 (lower is better)
Translates to: NCHRRMCSPVVLKPCSMVRITRI*FSALSY
Trigger: ATAAGACAGCGCGGAAAAGCAGATTCTCGTAATTCT...CACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR GCA 90 bp TCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGCAGAGACTCCTTGCAACATaGAATTCCAGAATTACGAGA +
Preference number: 4 (lower is better)
Translates to: SNGRRPGYLSHCSARWEQRLLAT*NSRITR
Trigger: TCTCGTAATTCTGGAATTGCATGTTGCAAGGAGTCT...CTGCTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp GTAACAGTAACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAATATGACCAGGGAGAGTaGCCAGACGCAGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VTVTCWICALVRWMLDKEYDQGE*PDAEQS
Trigger: GCTCTGCTCTGCGTCTGGGCACTCTCCCTGGTCATA...TTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGTTACTGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp TGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCAAGTGTCAGCCTCACTGAGAAGTaGGTCTTGGTCTTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: WICALVRWMLDKEVNPSVSLTEK*VLVLAL
Trigger: CAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGCT...GACACTTGGATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp ACTCCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCGCATGTTTGGAAGACTaGTTTCTGCAGAGACACTGG +
Preference number: 4 (lower is better)
Translates to: TPALDSSLVIHQYCLKLSACLED*FLQRHW
Trigger: CCAGTGTCTCTGCAGAAAGCAGTCTTCCAAACATGC...GCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp TGGGAAGGTAAGATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACGCATGTTTGGAAGACTaGTTTCTGCAGAGACACTGG +
Preference number: 4 (lower is better)
Translates to: WEGKITATEECVVQWCLNACLED*FLQRHW
Trigger: CCAGTGTCTCTGCAGAAAGCAGTCTTCCAAACATGC...GTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTTACCTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR GCA 90 bp ATGCTCAGGTCTATTGTTTTCTCTTGGGAAAAGCCATACCACCCTGGTTGGTTCTATTCCCCTTTCCTCTaGATCTTTCCTGTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: MLRSIVFSWEKPYHPGWFYSPFL*IFPVLD
Trigger: GTCTAGGACAGGAAAGATGCAGAGGAAAGGGGAATA...GAACCAACCAGGGTGGTATGGCTTTTCCCAAGAGAAAACAATAGACCTGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp ATGCTCAGGTCTATTGTTTTCTCTTGGGAAAAGCCATACCACCCTGGTTGGTTCCAAGAAAGCATTAGCTaGAGGGAAATGCTGTTCCGT +
Preference number: 4 (lower is better)
Translates to: MLRSIVFSWEKPYHPGWFQESIS*REMLFR
Trigger: ACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTG...GAACCAACCAGGGTGGTATGGCTTTTCCCAAGAGAAAACAATAGACCTGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp AGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGTGTGTGTCCCTGATTTTCCTTTTCCTCTTTCCCTTTaGATTCATGATCATTCCTTA +
Preference number: 4 (lower is better)
Translates to: SRGREAGFMSWVCVPDFPFPLSL*IHDHSL
Trigger: TAAGGAATGATCATGAATGCAAAGGGAAAGAGGAAA...AGGAAAATCAGGGACACACACCCATGACATGAAGCCAGCTTCCCGTCCACGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521711.5
CDS-3UTR CCA 90 bp GTAACAGTAACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGGCTCCTCGTTGATCTaGCAGATGGTCTCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: VTVTCWICALVRWMLDKEGSSLI*QMVSSS
Trigger: CGAGGACGAGACCATCTGCCAGATCAACGAGGAGCC...TTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGTTACTGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp TCACTTAGGAACAAGCGATGTCACATAATACATAGCCATAGCTTCCAGCTGACTAGCCCAGGGCATGTTTaGAAGACTGCTTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SLRNKRCHIIHSHSFQLTSPGHV*KTAFCR
Trigger: TCTGCAGAAAGCAGTCTTCCAAACATGCCCTGGGCT...AGTCAGCTGGAAGCTATGGCTATGTATTATGTGACATCGCTTGTTCCTAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp CAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCAGTGGTACAGGAGGATTaGTCTTTGGACACTGTAATC +
Preference number: 4 (lower is better)
Translates to: QVLTMKPTGPEGWDIQFSVVQED*SLDTVI
Trigger: GATTACAGTGTCCAAAGACCAATCCTCCTGTACCAC...TGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp TGCAGAAAAGTAGGAATAGATGAAGTTGAGTTGACTACTGGATCTTTTACCAGAGGTTCTTGTCAAGGCTaGGGGTTGAGGGCCCTACAC +
Preference number: 4 (lower is better)
Translates to: CRKVGIDEVELTTGSFTRGSCQG*GLRALH
Trigger: GTGTAGGGCCCTCAACCCCCAGCCTTGACAAGAACC...TCTGGTAAAAGATCCAGTAGTCAACTCAACTTCATCTATTCCTACTTTTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCGTGGACCTTAATGGTTaGAACTTGATGGTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: LKWAQSDQESISCREMLFVDLNG*NLMVLV
Trigger: GACAAGAACCATCAAGTTCCAACCATTAAGGTCCAC...GAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp CAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGAGAAGGAAGTGGGGTaGGTACCTAAGATTATTCCC +
Preference number: 4 (lower is better)
Translates to: QESISCREMLFRIILNWLEKEVG*VPKIIP
Trigger: GGGAATAATCTTAGGTACCCACCCCACTTCCTTCTC...CAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp AATGAGGAGCAGCATCCATTCAAAGTGCAGTCAAAGGTAAACCTCACTGCCAAGCGTATCATTCTGAACTaGTTGGTTGTGAGACACCCT +
Preference number: 4 (lower is better)
Translates to: NEEQHPFKVQSKVNLTAKRIILN*LVVRHP
Trigger: AGGGTGTCTCACAACCAACCAGTTCAGAATGATACG...CTTGGCAGTGAGGTTTACCTTTGACTGCACTTTGAATGGATGCTGCTCCTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp GGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTACTGGGCCAGAAGGTTaGGATATCCAGTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: GLNHETYWARRLGYPVFTTGPEG*DIQFSL
Trigger: AAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGT...AGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp GGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTAACCATGAAACCTACTaGGCCAGAAGGTTGGGATAT +
Preference number: 4 (lower is better)
Translates to: GLNHETYWARRLGYPVFTNHETY*ARRLGY
Trigger: ATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTT...AGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CCA 90 bp TCAGTCCCTATTAAACATGGGTGTTTCACTTCTCAGCTGTGGATAGCACACTCAGAATGTGTAGTCCAGTaGTGCTTAAACCGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SVPIKHGCFTSQLWIAHSECVVQ*CLNRAP
Trigger: TGGAGCACGGTTTAAGCACCACTGGACTACACATTC...TGAGTGTGCTATCCACAGCTGAGAAGTGAAACACCCATGTTTAATAGGGACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519096.5
CDS-3UTR CCA 90 bp CGTGGACGGGAAGCTGGCTTCATGTCATGGGTGTGTGTCCCTTTAAAACACAAGGTAACAGTAACATGTTaGATTTGTGCCTTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: RGREAGFMSWVCVPLKHKVTVTC*ICALVR
Trigger: TCTGACTAAGGCACAAATCCAACATGTTACTGTTAC...CTTGTGTTTTAAAGGGACACACACCCATGACATGAAGCCAGCTTCCCGTCCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR TCA 90 bp CACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATATTCATGCGATGTAGTAGTGCGTaGCTGAGTGCAGGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: HFHQEIAPNLECVLKIFMRCSSA*LSAGVG
Trigger: ACCGACACCTGCACTCAGTCACGCACTACTACATCG...CATGAATATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp AATAAAATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCTTGAGGAGCCTCACTaGGAAGTGCGTCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: NKIPSLPSRNSSKLRVCALEEPH*EVRLGL
Trigger: AAGACCAAGACGCACTTCTCAGTGAGGCTCCTCAAG...AGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGATTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp GTAACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATGTAGAAGGTCTCTCTTaGTCCCACGGGGATGCGCAC +
Preference number: 4 (lower is better)
Translates to: VTCWICALVRWMLDKEVNVEGLS*SHGDAH
Trigger: GTGCGCATCCCCGTGGGATCAAGAGAGACCTTCTAC...ATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR TCA 90 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCAAGTTTCCCTCAAGCTaGGAAATTGGATGTATCAGA +
Preference number: 4 (lower is better)
Translates to: LKWAQSDQESISCREMLFKFPSS*EIGCIR
Trigger: TCTGATACATCCAATTTCTCAGCTTGAGGGAAACTT...GAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR TCA 90 bp CCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCATTTGGCTGTGCAGTAAGTaGACAGCCTCTATCTTTGCA +
Preference number: 4 (lower is better)
Translates to: PALDSSLVIHQYCLKLSIWLCSK*TASIFA
Trigger: TGCAAAGATAGAGGCTGTTCACTTACTGCACAGCCA...AATGCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR TCA 90 bp ACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCAATGGGTGTGTGTCCCTaGTTTTCCTGGGTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: TCWICALVRWMLDKEVNPMGVCP*FSWVSP
Trigger: GGGACTGACCCAGGAAAATCAGGGACACACACCCAT...TGGATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521711.5
CDS-3UTR GCA 90 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCAGACTCCTTGCAACATaGAATTCCAGAATTACGAGA +
Preference number: 4 (lower is better)
Translates to: LKWAQSDQESISCREMLFRLLAT*NSRITR
Trigger: TCTCGTAATTCTGGAATTGCATGTTGCAAGGAGTCT...GAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp ACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCAGCACAGCACATCCACTaGCGCCCAGATGTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: TCWICALVRWMLDKEVNPAQHIH*RPDVAE
Trigger: TTCTGCAACATCTGGGCGGCAGTGGATGTGCTGTGC...TGGATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp GTGAACAGCCTCTATCTTTGCAAGAAATTAACAGCCACACCAACCTCTTGCTCTTGGAAGACTGCTTTCTaGAGAGACACTGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: VNSLYLCKKLTATPTSCSWKTAF*RDTGFS
Trigger: TGAGAATCCAGTGTCTCTGCAGAAAGCAGTCTTCCA...AGAGCAAGAGGTTGGTGTGGCTGTTAATTTCTTGCAAAGATAGAGGCTGTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp GAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTCAAGAAAGCATTAGCTaGAGGGAAATGCTGTTCCGT +
Preference number: 4 (lower is better)
Translates to: ESISCREMLFRIILNWLVQESIS*REMLFR
Trigger: ACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTG...AACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp GAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTAAAGGTAAACCTCACTaGCAAGTTTCCCTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: ESISCREMLFRIILNWLVKGKPH*QVSLKL
Trigger: CAGCTTGAGGGAAACTTGGCAGTGAGGTTTACCTTT...AACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp GATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATATGTATCTAGTTCTTATTCGTCCTGGCTaGGGGAAGATTCAGCATTCT +
Preference number: 4 (lower is better)
Translates to: DGSRNPINSSCQKNMYLVLIRPG*GKIQHS
Trigger: AGAATGCTGAATCTTCCCCCAGCCAGGACGAATAAG...AACTAGATACATATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp CCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCATTCTTATTCGTCCTGGCTaGGGGAAGATTCAGCATTCT +
Preference number: 4 (lower is better)
Translates to: PALDSSLVIHQYCLKLSILIRPG*GKIQHS
Trigger: AGAATGCTGAATCTTCCCCCAGCCAGGACGAATAAG...AATGCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp GCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCATTAGTCTGTCTTATTCGTCCTaGCTGGGGGAAGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: ALDSSLVIHQYCLKLSISLSYSS*LGEDSA
Trigger: TGCTGAATCTTCCCCCAGCCAGGACGAATAAGACAG...ACTAATGCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp GTAACAGTAACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAACGAGCAGAATGGCCTTaGAAATGTTCACCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: VTVTCWICALVRWMLDKERAEWP*KCSPVP
Trigger: CGGCACCGGTGAACATTTCCAAGGCCATTCTGCTCG...TTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGTTACTGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp AATAAAATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTTCACCCCGAGCAGAATaGCCTTGGAAATGTTCACCG +
Preference number: 4 (lower is better)
Translates to: NKIPSLPSRNSSKLRVCASPRAE*PWKCSP
Trigger: CGGTGAACATTTCCAAGGCCATTCTGCTCGGGGTGA...AGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGATTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp TGGGAAGGTAAGATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACGTGGTACAGGAGGATTaGTCTTTGGACACTGTAATC +
Preference number: 4 (lower is better)
Translates to: WEGKITATEECVVQWCLNVVQED*SLDTVI
Trigger: GATTACAGTGTCCAAAGACCAATCCTCCTGTACCAC...GTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTTACCTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR CCA 90 bp AACTCCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCTGAGGGAGATGGTGTaGACCTTAATGGTTGGAACT +
Preference number: 4 (lower is better)
Translates to: NSCVRQFFGDPSVLSEAKLREMV*TLMVGT
Trigger: AGTTCCAACCATTAAGGTCCACACCATCTCCCTCAG...CTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp GAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTTGGTTTTCGTTGAAGTaGGCACAGAGTGACCAAGAA +
Preference number: 4 (lower is better)
Translates to: ESISCREMLFRIILNWLVWFSLK*AQSDQE
Trigger: TTCTTGGTCACTCTGTGCCCACTTCAACGAAAACCA...AACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
3UTR CAA 72 bp GGCTGGTCACATTCTGCTCCCTGTGAGATGATGCTTTaGGTCTTCTTTCTCCAAACACTGAAAGAACTGAAT +
Preference number: 4 (lower is better)
Translates to: GWSHSAPCEMML*VFFLQTLKELN
Trigger: ATTCAGTTCTTTCAGTGTTTGGAGAAAGAAGACCAAAAGCATCATCTCACAGGGAGCAGAATGTGACCAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR TCA 90 bp TGCAGAAAAGTAGGAATAGATGAAGTTGAGTTGACTACTGGATCTTTTACCAGACTTGAGGAGCCTCACTaGGAAGTGCGTCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: CRKVGIDEVELTTGSFTRLEEPH*EVRLGL
Trigger: AAGACCAAGACGCACTTCTCAGTGAGGCTCCTCAAG...TCTGGTAAAAGATCCAGTAGTCAACTCAACTTCATCTATTCCTACTTTTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR TCA 90 bp ATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATTCTGAAAGGCCTTTTTaGACTCTTGGCTGGAGCATG +
Preference number: 4 (lower is better)
Translates to: IPSLPSRNSSKLRVCAQNSERPF*TLGWSM
Trigger: CATGCTCCAGCCAAGAGTTCAAAAAGGCCTTTCAGA...ATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR TCA 90 bp CTCTATCTTTGCAAGAAATTAACAGCCACACCAACCTCTTGCTCTTTAAAGATACATGGTGGTTTTCGTTaGAGTGGGCACAGAGTGACC +
Preference number: 4 (lower is better)
Translates to: LYLCKKLTATPTSCSLKIHGGFR*SGHRVT
Trigger: GGTCACTCTGTGCCCACTTCAACGAAAACCACCATG...TATCTTTAAAGAGCAAGAGGTTGGTGTGGCTGTTAATTTCTTGCAAAGATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR TCA 90 bp CCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCCTCTGCAATTCTTGGTaGAATATCTACAATCCATTC +
Preference number: 4 (lower is better)
Translates to: PGLNHETYWARRLGYPVFLCNSW*NIYNPF
Trigger: GAATGGATTGTAGATATTTCACCAAGAATTGCAGAG...GAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR TCA 90 bp TCAGGACTTGCTCTAAAAATAATGTGTCTGGATCTCGGCCACCATCTTAATGCTCCAACATGCCACAGGTaGAGCTCATTCATTATGCAA +
Preference number: 4 (lower is better)
Translates to: SGLALKIMCLDLGHHLNAPTCHR*SSFIMQ
Trigger: TTGCATAATGAATGAGCTTCACCTGTGGCATGTTGG...AGCATTAAGATGGTGGCCGAGATCCAGACACATTATTTTTAGAGCAAGTCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp TACCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTTCACATGCTTGATATaGTCTCTGCAATTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: YQVLTMKPTGPEGWDIQFFTCLI*SLQFLV
Trigger: CACCAAGAATTGCAGAGAGCATATCAAGCATGTGAA...AAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR GCA 90 bp GTAACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCAGTGGTGGGTTTCATaGTCCCCTTCCTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VTCWICALVRWMLDKEVNQWWVS*SPSLGS
Trigger: ACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTG...ATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR GCA 90 bp CTCACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGCCAATTAACAGTTCCTaGCAGAAGAATATGTATCTA +
Preference number: 4 (lower is better)
Translates to: LTVVQDGSRNPINSSCQKPINSS*QKNMYL
Trigger: TAGATACATATTCTTCTGGCAGGAACTGTTAATTGG...CTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp GATGATATGCTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGAGCACAGATGATATaGTTTCCAATGGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: DDMLSNGRRPGYLSHCSARAQMI*FPMVGD
Trigger: GTCTCCTACCATTGGAAAGCATATCATCTGTGCTCT...TGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATATCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CCA 90 bp ATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATCTTATTCGTCCTGGCTaGGGGAAGATTCAGCATTCT +
Preference number: 4 (lower is better)
Translates to: IPSLPSRNSSKLRVCAQNLIRPG*GKIQHS
Trigger: AGAATGCTGAATCTTCCCCCAGCCAGGACGAATAAG...ATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp ACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCATCACCCCGAGCAGAATaGCCTTGGAAATGTTCACCG +
Preference number: 4 (lower is better)
Translates to: TCWICALVRWMLDKEVNPSPRAE*PWKCSP
Trigger: CGGTGAACATTTCCAAGGCCATTCTGCTCGGGGTGA...TGGATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp GTAACAGTAACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAATCACCCCGAGCAGAATaGCCTTGGAAATGTTCACCG +
Preference number: 4 (lower is better)
Translates to: VTVTCWICALVRWMLDKESPRAE*PWKCSP
Trigger: CGGTGAACATTTCCAAGGCCATTCTGCTCGGGGTGA...TTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGTTACTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CCA 90 bp AATAAAATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTAGCCCAGGGCATGTTTaGAAGACTGCTTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: NKIPSLPSRNSSKLRVCASPGHV*KTAFCR
Trigger: TCTGCAGAAAGCAGTCTTCCAAACATGCCCTGGGCT...AGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGATTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp TCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATAAAACGCCATCCGTCTTaGAGATCCTGTAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: SPHFHQEIAPNLECVLKIKRHPS*RSCRRS
Trigger: AGACCTTCTACAGGATCTCCAAGACGGATGGCGTTT...TATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp TCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATAGAGAAGGAAGTGGGGTaGGTACCTAAGATTATTCCC +
Preference number: 4 (lower is better)
Translates to: SPHFHQEIAPNLECVLKIEKEVG*VPKIIP
Trigger: GGGAATAATCTTAGGTACCCACCCCACTTCCTTCTC...TATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp CACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATATTCATGTCCTCCAAGAAGAGCTaGCCTTCCGAGAAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: HFHQEIAPNLECVLKIFMSSKKS*PSEKEV
Trigger: CACTTCCTTCTCGGAAGGCCAGCTCTTCTTGGAGGA...CATGAATATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp GTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTACCCTTTCTCCACGGTaGCATCATAAAATTCACATG +
Preference number: 4 (lower is better)
Translates to: VLTMKPTGPEGWDIQFSLTLSPR*HHKIHM
Trigger: CATGTGAATTTTATGATGCCACCGTGGAGAAAGGGT...AAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR TCA 90 bp GCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCATTAGTCTCATCTTTGGGAAATaGGGAGCAGCATCCATTCAA +
Preference number: 4 (lower is better)
Translates to: ALDSSLVIHQYCLKLSISLIFGK*GAASIQ
Trigger: TTGAATGGATGCTGCTCCTCATTTCCCAAAGATGAG...ACTAATGCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR TCA 90 bp CTCTATCTTTGCAAGAAATTAACAGCCACACCAACCTCTTGCTCTTTAAAGATACATTCCAAGACATCATaGGTGCCCCTCACTCTCATC +
Preference number: 4 (lower is better)
Translates to: LYLCKKLTATPTSCSLKIHSKTS*VPLTLI
Trigger: GATGAGAGTGAGGGGCACTCATGATGTCTTGGAATG...TATCTTTAAAGAGCAAGAGGTTGGTGTGGCTGTTAATTTCTTGCAAAGATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR TCA 90 bp TTGTTTTCTCTTGGGAAAAGCCATACCACCCTGGTTGGTTCTTTCAACCCTCTCAAGCCTATCATCATCTaGTCTTGGAACTGTTTAATG +
Preference number: 4 (lower is better)
Translates to: LFSLGKSHTTLVGSFNPLKPIII*SWNCLM
Trigger: CATTAAACAGTTCCAAGATCAGATGATGATAGGCTT...GAGAGGGTTGAAAGAACCAACCAGGGTGGTATGGCTTTTCCCAAGAGAAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR TCA 90 bp GATGATATGCTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAACAGGTGTCTTTCCTTaGAACACCTTCCAAATTTTC +
Preference number: 4 (lower is better)
Translates to: DDMLSNGRRPGYLSHCSATGVFP*NTFQIF
Trigger: GAAAATTTGGAAGGTGTTTCAAGGAAAGACACCTGT...TGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATATCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp GAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTAGAATTACGAGAATCTaGTTTTCCGCGCTGTCTTAT +
Preference number: 4 (lower is better)
Translates to: ESISCREMLFRIILNWLVRITRI*FSALSY
Trigger: ATAAGACAGCGCGGAAAAGCAGATTCTCGTAATTCT...AACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp GATATGCTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGAAGAATTACGAGAATCTaGTTTTCCGCGCTGTCTTAT +
Preference number: 4 (lower is better)
Translates to: DMLSNGRRPGYLSHCSARRITRI*FSALSY
Trigger: ATAAGACAGCGCGGAAAAGCAGATTCTCGTAATTCT...TCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR GCA 90 bp ACTCCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCGCCACACCAACCTCTTaGTCTTTAAAGATATTAGAG +
Preference number: 4 (lower is better)
Translates to: TPALDSSLVIHQYCLKLSATPTS*SLKILE
Trigger: CTCTAATATCTTTAAAGAGCAAGAGGTTGGTGTGGC...GCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp CAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGATGTTTGCAAACTCCTaGGTTAGACAGTTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: QESISCREMLFRIILNWLMFANS*VRQFFG
Trigger: ACCAAAGAACTGTCTAACGCAGGAGTTTGCAAACAT...CAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp GTAACAGTAACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAACTGTCTTATTCGTCCTaGCTGGGGGAAGATTCAGCA +
Preference number: 4 (lower is better)
Translates to: VTVTCWICALVRWMLDKELSYSS*LGEDSA
Trigger: TGCTGAATCTTCCCCCAGCCAGGACGAATAAGACAG...TTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGTTACTGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CCA 90 bp CACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATATTCATGGGTCCCCTCTTTGATTaGTCCTGTCTTGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: HFHQEIAPNLECVLKIFMGPLFD*SCLVLQ
Trigger: TTGGAGGACAAGACAGGACCAATCAAAGAGGGGACC...CATGAATATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp ATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATTGGTTTTCGTTGAAGTaGGCACAGAGTGACCAAGAA +
Preference number: 4 (lower is better)
Translates to: IPSLPSRNSSKLRVCAQNWFSLK*AQSDQE
Trigger: TTCTTGGTCACTCTGTGCCCACTTCAACGAAAACCA...ATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CCA 90 bp AACTCCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGATGTATCAGAAAGGGTaGAGTTTCAGGACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: NSCVRQFFGDPSVLSEAKMYQKG*SFRTCS
Trigger: AGAGCAAGTCCTGAAACTCCACCCTTTCTGATACAT...CTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp TCAGGACTTGCTCTAAAAATAATGTGTCTGGATCTCGGCCACCATCTTAATGCTCTCAAGCTGAGAAATTaGATGTATCAGAAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SGLALKIMCLDLGHHLNALKLRN*MYQKGW
Trigger: CCACCCTTTCTGATACATCCAATTTCTCAGCTTGAG...AGCATTAAGATGGTGGCCGAGATCCAGACACATTATTTTTAGAGCAAGTCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380573.4
3UTR CAA 72 bp CAAACACTGAAAGAACTGAATACTCTTCTTTTTAATTaGGGCCAACACCAATCCGTTCATCCTTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QTLKELNTLLFN*GQHQSVHPCSC
Trigger: GCAGCTGCAAGGATGAACGGATTGGTGTTGGCCCAAATTAAAAAGAAGAGTATTCAGTTCTTTCAGTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR TCA 90 bp TGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCAAGTGTCACATTCTGCTCCCTGTaGGATGATGCTTTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: WICALVRWMLDKEVNPSVTFCSL*DDAFGL
Trigger: AAGACCAAAAGCATCATCTCACAGGGAGCAGAATGT...GACACTTGGATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR CCA 90 bp CCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCATTAAATTCTGTTTCCCATaGTGGTTTTCGTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PALDSSLVIHQYCLKLSIKFCFP*WFSLKW
Trigger: CCACTTCAACGAAAACCACCATGGGAAACAGAATTT...AATGCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR TCA 90 bp GTAACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCTGCTCCCTGTGAGATaGTGCTTTTGGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: VTCWICALVRWMLDKEVNLLPVR*CFWSSF
Trigger: GAAAGAAGACCAAAAGCATCATCTCACAGGGAGCAG...ATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR GCA 90 bp GTGGCTGATGATTCTCAATTAACTTTTAAGAATGAAATGGGGGAGGGAGGTTGTAGACTCCTTGCAACATaGAATTCCAGAATTACGAGA +
Preference number: 4 (lower is better)
Translates to: VADDSQLTFKNEMGEGGCRLLAT*NSRITR
Trigger: TCTCGTAATTCTGGAATTGCATGTTGCAAGGAGTCT...ACAACCTCCCTCCCCCATTTCATTCTTAAAAGTTAATTGAGAATCATCAGCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR GCA 90 bp ACTCCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCGAAGCTCATTCATTATaGAATAGTGAAGCAGATAAG +
Preference number: 4 (lower is better)
Translates to: TPALDSSLVIHQYCLKLSEAHSL*NSEADK
Trigger: CTTATCTGCTTCACTATTGCATAATGAATGAGCTTC...GCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp TCCTTTTGTAGAGTAAGAATTCTTACTCCAAACCCAATGTGTCCATTTTTCCAAAAACGCCATCCGTCTTaGAGATCCTGTAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: SFCRVRILTPNPMCPFFQKRHPS*RSCRRS
Trigger: AGACCTTCTACAGGATCTCCAAGACGGATGGCGTTT...TTGGAAAAATGGACACATTGGGTTTGGAGTAAGAATTCTTACTCTACAAAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR CCA 90 bp AATAAAATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTGTGGACCTTAATGGTTaGAACTTGATGGTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: NKIPSLPSRNSSKLRVCAVDLNG*NLMVLV
Trigger: GACAAGAACCATCAAGTTCCAACCATTAAGGTCCAC...AGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGATTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR GCA 90 bp TGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCAAGTGTCAACATGTTGGATTTGTaGCTTAGTCAGATGGATGCT +
Preference number: 4 (lower is better)
Translates to: WICALVRWMLDKEVNPSVNMLDL*LSQMDA
Trigger: AGCATCCATCTGACTAAGGCACAAATCCAACATGTT...GACACTTGGATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
3UTR CAA 72 bp AGCATTAGTATTTTTCAAAGTTCGGGAATAATGTACTaGGATCATAAGGCTCATTCCAACATGCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: SISIFQSSGIMY*DHKAHSNMPQV
Trigger: CACCTGTGGCATGTTGGAATGAGCCTTATGATCCAAGTACATTATTCCCGAACTTTGAAAAATACTAATGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp TGCAGAAAAGTAGGAATAGATGAAGTTGAGTTGACTACTGGATCTTTTACCAGAAGAATTACGAGAATCTaGTTTTCCGCGCTGTCTTAT +
Preference number: 4 (lower is better)
Translates to: CRKVGIDEVELTTGSFTRRITRI*FSALSY
Trigger: ATAAGACAGCGCGGAAAAGCAGATTCTCGTAATTCT...TCTGGTAAAAGATCCAGTAGTCAACTCAACTTCATCTATTCCTACTTTTCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR GCA 90 bp TGCAGAAAAGTAGGAATAGATGAAGTTGAGTTGACTACTGGATCTTTTACCAGAAGACTCCTTGCAACATaGAATTCCAGAATTACGAGA +
Preference number: 4 (lower is better)
Translates to: CRKVGIDEVELTTGSFTRRLLAT*NSRITR
Trigger: TCTCGTAATTCTGGAATTGCATGTTGCAAGGAGTCT...TCTGGTAAAAGATCCAGTAGTCAACTCAACTTCATCTATTCCTACTTTTCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CCA 90 bp GTAACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATGTAACAGTAACATGTTaGATTTGTGCCTTAGTCAGA +
Preference number: 4 (lower is better)
Translates to: VTCWICALVRWMLDKEVNVTVTC*ICALVR
Trigger: TCTGACTAAGGCACAAATCCAACATGTTACTGTTAC...ATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS GCA 90 bp GAGCGCGGGAGCCGGGAATCAAAAGGTCTCGGCTGGAGGGAGCCCTaGCAGGTGGGTTTGGCTGGGGGTGAGAGCGCGCGCGCGGGTGGG +
Preference number: 5 (lower is better)
Translates to: ERGSRESKGLGWREP*QVGLAGGESARAGG
Trigger: CCCACCCGCGCGCGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGGGCTCCCTCCAGCCGAGACCTTTTGATTCCCGGCTCCCGCGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS GCA 90 bp TCGCGCGCGGGGGATGTGGACCCGGCTTCGGTCCCGGGAGCTGCCTaGCTGCTCTTCTCTGGAGGCGGAGAGGGGACCGTGTCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: SRAGDVDPASVPGAA*LLFSGGGEGTVSPR
Trigger: CCTCGGAGACACGGTCCCCTCTCCGCCTCCAGAGAAGAGCAGGCAGGCAGCTCCCGGGACCGAAGCCGGGTCCACATCCCCCGCGCGCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS GCA 90 bp CAGCTCGCGCGCGGGGGATGTGGACCCGGCTTCGGTCCCGGGAGCTaGCTGCCTGCTCTTCTCTGGAGGCGGAGAGGGGACCGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: QLARGGCGPGFGPGS*LPALLWRRRGDRVS
Trigger: GGAGACACGGTCCCCTCTCCGCCTCCAGAGAAGAGCAGGCAGGCAGCTCCCGGGACCGAAGCCGGGTCCACATCCCCCGCGCGCGAGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS CCA 90 bp GGTTTGGCTGGGGGTGAGAGCGCGCGCGCGGGTGGGAAACAACCCTaGCCAGCCCTGGGAACCCTCAGAAGGCCACATGAAGGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GLAGGESARAGGKQP*PALGTLRRPHEGAG
Trigger: CCCTGCCCCTTCATGTGGCCTTCTGAGGGTTCCCAGGGCTGGCCAGGGTTGTTTCCCACCCGCGCGCGCGCTCTCACCCCCAGCCAAACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS CCA 90 bp GGGAATCAAAAGGTCTCGGCTGGAGGGAGCCCTGCCAGGTGGGTTTaGCTGGGGGTGAGAGCGCGCGCGCGGGTGGGAAACAACCCTGGC +
Preference number: 5 (lower is better)
Translates to: GNQKVSAGGSPARWV*LGVRARARVGNNPG
Trigger: GCCAGGGTTGTTTCCCACCCGCGCGCGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGGGCTCCCTCCAGCCGAGACCTTTTGATTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS CCA 90 bp GGGTGCAGTTGGAGCTGTCGGAAGCATTTCCCGAGAGAAACACCATaGTCCCAGCCGGGGCCGGGCGAGGTCCGGCTGTCCAGGGCCACC +
Preference number: 5 (lower is better)
Translates to: GCSWSCRKHFPRETP*SQPGPGEVRLSRAT
Trigger: GGTGGCCCTGGACAGCCGGACCTCGCCCGGCCCCGGCTGGGACCATGGTGTTTCTCTCGGGAAATGCTTCCGACAGCTCCAACTGCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS TCA 90 bp AGAAGGAGCCCAGCGCTGAGAAGAGCACGTAGCCCGGCTCCTCGTTaGTCTGGCAGATGGTCTCGTCCTCGGGGGCCGGCTGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RRSPALRRARSPAPR*SGRWSRPRGPAASS
Trigger: GCTGGAGGCAGCCGGCCCCCGAGGACGAGACCATCTGCCAGATCAACGAGGAGCCGGGCTACGTGCTCTTCTCAGCGCTGGGCTCCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CCA 90 bp GGGGTGAGAGCGCGCGCGCGGGTGGGAAACAACCCTGGCCAGCCCTaGGAACCCTCAGAAGGCCACATGAAGGGGCAGGGCATTAAAGAC +
Preference number: 5 (lower is better)
Translates to: GVRARARVGNNPGQP*EPSEGHMKGQGIKD
Trigger: GTCTTTAATGCCCTGCCCCTTCATGTGGCCTTCTGAGGGTTCCCAGGGCTGGCCAGGGTTGTTTCCCACCCGCGCGCGCGCTCTCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS-3UTR CAA 90 bp CCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGGTCTTGAGGCCAGACTaGAGGCCCCGGCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: PGLLGWIPKTVGRRTSGGVLRPD*RPRLSL
Trigger: GAGGGAGAGCCGGGGCCTCAAGTCTGGCCTCAAGAC...CCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS CCA 90 bp CGGGGATGCGCACCATGTCCTTGTGTTGCCCTTCCACGGCCTGGCTaGGCGGGTGCAGGGTGTAGCCCAGGGCATGTTTGGAAGACTGCT +
Preference number: 5 (lower is better)
Translates to: RGCAPCPCVALPRPG*AGAGCSPGHVWKTA
Trigger: AGCAGTCTTCCAAACATGCCCTGGGCTACACCCTGCACCCGCCCAGCCAGGCCGTGGAAGGGCAACACAAGGACATGGTGCGCATCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000518621.1
ENST00000519229.5
CDS GCA 90 bp GGCTCCTCGTTGATCTGGCAGATGGTCTCGTCCTCGGGGGCCGGCTaGCTCCAGCCGAACAGGGGTCCAATGGATATGACCAGGGAGAGT +
Preference number: 5 (lower is better)
Translates to: GSSLIWQMVSSSGAG*LQPNRGPMDMTRES
Trigger: ACTCTCCCTGGTCATATCCATTGGACCCCTGTTCGGCTGGAGGCAGCCGGCCCCCGAGGACGAGACCATCTGCCAGATCAACGAGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS GCA 90 bp CTGCCTCCTGCCGGGGCGTTTTTCCGATGGATGCGGAGCGTCACTTaGTCCGAGTCCGACTTGTCGGTCTTGAGGCCAGACTTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: LPPAGAFFRWMRSVT*SESDLSVLRPDLRP
Trigger: GGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATCCATCGGAAAAACGCCCCGGCAGGAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS GCA 90 bp GCCTCACTGAGAAGTGCGTCTTGGTCTTGGCGCTGGCCATCCCGCTaGCTCCTGCCGGGGCGTTTTTCCGATGGATGCGGAGCGTCACTT +
Preference number: 5 (lower is better)
Translates to: ASLRSASWSWRWPSR*LLPGRFSDGCGASL
Trigger: AAGTGACGCTCCGCATCCATCGGAAAAACGCCCCGGCAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS GCA 90 bp GGCAGGGACCGATGGTTGGGTAGCGCAGCGCTACAGGTTGGGCGCTaGTCCTGGCCCGCAGTTACCTACATTTTGAGCTGCCCCACCGAA +
Preference number: 5 (lower is better)
Translates to: GRDRWLGSAALQVGR*SWPAVTYILSCPTE
Trigger: TTCGGTGGGGCAGCTCAAAATGTAGGTAACTGCGGGCCAGGAGCAGCGCCCAACCTGTAGCGCTGCGCTACCCAACCATCGGTCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS CCA 90 bp CGGGCTGGCCTAGCCCGGGACCCGGACTCCCTCCCTACCCGAAGCTaGGTGCGAAGATCCAGGAGACTCCTTGCAACATGCAATTCCAGA +
Preference number: 5 (lower is better)
Translates to: RAGLARDPDSLPTRS*VRRSRRLLATCNSR
Trigger: TCTGGAATTGCATGTTGCAAGGAGTCTCCTGGATCTTCGCACCCAGCTTCGGGTAGGGAGGGAGTCCGGGTCCCGGGCTAGGCCAGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS CCA 90 bp GACCGATGGTTGGGTAGCGCAGCGCTACAGGTTGGGCGCTGCTCCTaGCCCGCAGTTACCTACATTTTGAGCTGCCCCACCGAAGGCTCC +
Preference number: 5 (lower is better)
Translates to: DRWLGSAALQVGRCS*PAVTYILSCPTEGS
Trigger: GGAGCCTTCGGTGGGGCAGCTCAAAATGTAGGTAACTGCGGGCCAGGAGCAGCGCCCAACCTGTAGCGCTGCGCTACCCAACCATCGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS CCA 90 bp AACCAAAAGATCAGCCGTCGACGCTCAAAGGCAGGGACCGATGGTTaGGTAGCGCAGCGCTACAGGTTGGGCGCTGCTCCTGGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: NQKISRRRSKAGTDG*VAQRYRLGAAPGPQ
Trigger: CTGCGGGCCAGGAGCAGCGCCCAACCTGTAGCGCTGCGCTACCCAACCATCGGTCCCTGCCTTTGAGCGTCGACGGCTGATCTTTTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp TTAGCTGGGCCTGGTGGCGTCGGCCTGGTGGCACATCCCTGTAGTCCCAGCTGCGGCGGTTGGGTGCAGTaGGAGCTGTCGGAAGCATTT +
Preference number: 5 (lower is better)
Translates to: LAGPGGVGLVAHPCSPSCGGWVQ*ELSEAF
Trigger: AAATGCTTCCGACAGCTCCAACTGCACCCAACCGCC...GCAGCTGGGACTACAGGGATGTGCCACCAGGCCGACGCCACCAGGCCCAGCTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519096.5
CDS GCA 90 bp CTGCCTCCAGCCGAACAGGGGTCCAATGGATATGACCAGGGAGAGTaGCCAGACGCAGAGCAGAGCCATGAGACCCCTCCTCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: LPPAEQGSNGYDQGE*PDAEQSHETPPLGD
Trigger: GTCACCCAGAGGAGGGGTCTCATGGCTCTGCTCTGCGTCTGGGCACTCTCCCTGGTCATATCCATTGGACCCCTGTTCGGCTGGAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CCA 90 bp CTCAAACCAAAAGATCAGCCGTCGACGCTCAAAGGCAGGGACCGATaGTTGGGTAGCGCAGCGCTACAGGTTGGGCGCTGCTCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: LKPKDQPSTLKGRDR*LGSAALQVGRCSWP
Trigger: GGGCCAGGAGCAGCGCCCAACCTGTAGCGCTGCGCTACCCAACCATCGGTCCCTGCCTTTGAGCGTCGACGGCTGATCTTTTGGTTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp AGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCCCCTGCCAGGTGGGTTaGGCTGGGGGTGAGAGCGCG +
Preference number: 5 (lower is better)
Translates to: RTSGGFHAPLPWAVRTTVPCQVG*AGGESA
Trigger: CGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGGG...GACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CAA 90 bp GTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTCACCGGTGCCGGCGGTaGGGTGCAGTTGGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: VDSKDSGSQDQWWVSCSPHRCRR*GAVGAV
Trigger: GACAGCTCCAACTGCACCCAACCGCCGGCACCGGTG...AGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp ACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAGTCTTGAGGCCAGACTaGAGGCCCCGGCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: TVGRRTSGGFHAPLPWAVVLRPD*RPRLSL
Trigger: GAGGGAGAGCCGGGGCCTCAAGTCTGGCCTCAAGAC...TACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp CAAGGCTCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGATGCGCACCATGTCCTaGTGTTGCCCTTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: QGSWAPGVDSKDSGSQDQMRTMS*CCPSTA
Trigger: GGCCGTGGAAGGGCAACACAAGGACATGGTGCGCAT...CTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGAGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS GCA 90 bp CCGTCTTGGAGATCCTGTAGAAGGTCTCTCTTGATCCCACGGGGATaGGCACCATGTCCTTGTGTTGCCCTTCCACGGCCTGGCTGGGCG +
Preference number: 5 (lower is better)
Translates to: PSWRSCRRSLLIPRG*APCPCVALPRPGWA
Trigger: CGCCCAGCCAGGCCGTGGAAGGGCAACACAAGGACATGGTGCGCATCCCCGTGGGATCAAGAGAGACCTTCTACAGGATCTCCAAGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000518621.1
ENST00000519229.5
CDS GCA 90 bp CAGGTTGGGCGCTGCTCCTGGCCCGCAGTTACCTACATTTTGAGCTaGCCCACCGAAGGCTCCTGCTCTCTCCAGCTTCTAGGAGCACAG +
Preference number: 5 (lower is better)
Translates to: QVGRCSWPAVTYILS*PTEGSCSLQLLGAQ
Trigger: CTGTGCTCCTAGAAGCTGGAGAGAGCAGGAGCCTTCGGTGGGGCAGCTCAAAATGTAGGTAACTGCGGGCCAGGAGCAGCGCCCAACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp GTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCCTGCCAGGTGGGTTaGGCTGGGGGTGAGAGCGCG +
Preference number: 5 (lower is better)
Translates to: VQWCLNRAPWCTMYPLEAPCQVG*AGGESA
Trigger: CGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGGG...GGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp AGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCCACCGGTGCCGGCGGTaGGGTGCAGTTGGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: RTSGGFHAPLPWAVRTTVHRCRR*GAVGAV
Trigger: GACAGCTCCAACTGCACCCAACCGCCGGCACCGGTG...GACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp GGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCGTCTTGAGGCCAGACTaGAGGCCCCGGCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: GFQRQWVAGPVVGFMLPFVLRPD*RPRLSL
Trigger: GAGGGAGAGCCGGGGCCTCAAGTCTGGCCTCAAGAC...GAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp GACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTTCCGACTTGTCGGTCTaGAGGCCAGACTTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: DSGSQDQWWVSCSPSLGSSDLSV*RPDLRP
Trigger: GGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGA...ACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp GACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTTGCTCCGAGTCCGACTaGTCGGTCTTGAGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: DSGSQDQWWVSCSPSLGSCSESD*SVLRPD
Trigger: GTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCA...ACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp GTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGCACCATGTCCTTGTGTaGCCCTTCCACGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: VGRRTSGGFHAPLPWAVRHHVLV*PFHGLA
Trigger: AGCCAGGCCGTGGAAGGGCAACACAAGGACATGGTG...CCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS GCA 90 bp CCCCAAGATCACCCCGAGCAGAATGGCCTTGGAAATGTTCACCGGTaGCGGCGGTTGGGTGCAGTTGGAGCTGTCGGAAGCATTTCCCGA +
Preference number: 5 (lower is better)
Translates to: PQDHPEQNGLGNVHR*RRLGAVGAVGSISR
Trigger: TCGGGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCGGCACCGGTGAACATTTCCAAGGCCATTCTGCTCGGGGTGATCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp TGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTCCCTGCCAGGTGGGTTaGGCTGGGGGTGAGAGCGCG +
Preference number: 5 (lower is better)
Translates to: WPSEKEVGWVPKIIPLSSPCQVG*AGGESA
Trigger: CGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGGG...AGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp GGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCCGAGCAGAATGGCCTaGGAAATGTTCACCGGTGCC +
Preference number: 5 (lower is better)
Translates to: GLLGWIPKTVGRRTSGGFPSRMA*EMFTGA
Trigger: GGCACCGGTGAACATTTCCAAGGCCATTCTGCTCGG...AAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp CCCCATTCCCAGCAGGTCCCCTCTTTGATTGGTCCTGTCTTGTCCTCCAAGAAGGTCTTGAGGCCAGACTaGAGGCCCCGGCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: PHSQQVPSLIGPVLSSKKVLRPD*RPRLSL
Trigger: GAGGGAGAGCCGGGGCCTCAAGTCTGGCCTCAAGAC...CTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp GATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCAAGTGCGTCTTGGTCTaGGCGCTGGCCATCCCGCTG +
Preference number: 5 (lower is better)
Translates to: DSKDSGSQDQWWVSCSPSKCVLV*ALAIPL
Trigger: CAGCGGGATGGCCAGCGCCAAGACCAAGACGCACTT...GGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp GGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTACTGAGAAGTGCGTCTaGGTCTTGGCGCTGGCCATC +
Preference number: 5 (lower is better)
Translates to: GLLGWIPKTVGRRTSGGFTEKCV*VLALAI
Trigger: GATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGT...AAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp GGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAATGCGCACCATGTCCTaGTGTTGCCCTTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: GRRTSGGFHAPLPWAVRTMRTMS*CCPSTA
Trigger: GGCCGTGGAAGGGCAACACAAGGACATGGTGCGCAT...TGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR CAA 90 bp GGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCAGCGCAGCGCTACAGGTaGGGCGCTGCTCCTGGCCCG +
Preference number: 5 (lower is better)
Translates to: GHRVTKKALAAGKCCSVSAQRYR*GAAPGP
Trigger: CGGGCCAGGAGCAGCGCCCAACCTGTAGCGCTGCGC...TGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS CCA 90 bp ACCCCGAGCAGAATGGCCTTGGAAATGTTCACCGGTGCCGGCGGTTaGGTGCAGTTGGAGCTGTCGGAAGCATTTCCCGAGAGAAACACC +
Preference number: 5 (lower is better)
Translates to: TPSRMALEMFTGAGG*VQLELSEAFPERNT
Trigger: GGTGTTTCTCTCGGGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCGGCACCGGTGAACATTTCCAAGGCCATTCTGCTCGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp GCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCAGGCGGTTGGGTGCAGTaGGAGCTGTCGGAAGCATTT +
Preference number: 5 (lower is better)
Translates to: APGVDSKDSGSQDQWWVSGGWVQ*ELSEAF
Trigger: AAATGCTTCCGACAGCTCCAACTGCACCCAACCGCC...TGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp GGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAGGCGGTTGGGTGCAGTaGGAGCTGTCGGAAGCATTT +
Preference number: 5 (lower is better)
Translates to: GRRTSGGFHAPLPWAVRTGGWVQ*ELSEAF
Trigger: AAATGCTTCCGACAGCTCCAACTGCACCCAACCGCC...TGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp TCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGACTGCCGCCCAGATGTaGCAGAAGACCCTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: SWGGFQRQWVAGPVVGFMTAAQM*QKTLPK
Trigger: CTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAGT...CATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp TCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGTCCGACTTGTCGGTCTaGAGGCCAGACTTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: SKDSGSQDQWWVSCSPSLSDLSV*RPDLRP
Trigger: GGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGA...CAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp CCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGTGCTCCGAGTCCGACTaGTCGGTCTTGAGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: PWAVRTTVVDGKLASCHGCSESD*SVLRPD
Trigger: GTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCA...CCCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp CCCCATTCCCAGCAGGTCCCCTCTTTGATTGGTCCTGTCTTGTCCTCCAAGAAGAAGTGCGTCTTGGTCTaGGCGCTGGCCATCCCGCTG +
Preference number: 5 (lower is better)
Translates to: PHSQQVPSLIGPVLSSKKKCVLV*ALAIPL
Trigger: CAGCGGGATGGCCAGCGCCAAGACCAAGACGCACTT...CTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp GGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCTGTAGAAGGTCTCTCTaGATCCCACGGGGATGCGCA +
Preference number: 5 (lower is better)
Translates to: GSWGGFQRQWVAGPVVGFCRRSL*IPRGCA
Trigger: TGCGCATCCCCGTGGGATCAAGAGAGACCTTCTACA...GAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS GCA 90 bp CGAGCAGAATGGCCTTGGAAATGTTCACCGGTGCCGGCGGTTGGGTaGAGTTGGAGCTGTCGGAAGCATTTCCCGAGAGAAACACCATGG +
Preference number: 5 (lower is better)
Translates to: RAEWPWKCSPVPAVG*SWSCRKHFPRETPW
Trigger: CCATGGTGTTTCTCTCGGGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCGGCACCGGTGAACATTTCCAAGGCCATTCTGCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CCA 90 bp GAATGGCCTTGGAAATGTTCACCGGTGCCGGCGGTTGGGTGCAGTTaGAGCTGTCGGAAGCATTTCCCGAGAGAAACACCATGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: EWPWKCSPVPAVGCS*SCRKHFPRETPWSQ
Trigger: CTGGGACCATGGTGTTTCTCTCGGGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCGGCACCGGTGAACATTTCCAAGGCCATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS-3UTR CAA 90 bp TTCTGTTTCCCATGGTGGTTTTCGTTGAAGTGGGCACAGAGTGACCAAGAAAGCCCCTGCCAGGTGGGTTaGGCTGGGGGTGAGAGCGCG +
Preference number: 5 (lower is better)
Translates to: FCFPWWFSLKWAQSDQESPCQVG*AGGESA
Trigger: CGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGGG...GCTTTCTTGGTCACTCTGTGCCCACTTCAACGAAAACCACCATGGGAAACAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp GGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCACACCGGTGCCGGCGGTaGGGTGCAGTTGGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: GHRVTKKALAAGKCCSVSHRCRR*GAVGAV
Trigger: GACAGCTCCAACTGCACCCAACCGCCGGCACCGGTG...TGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp TCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGCAGCACCGGTGCCGGCGGTaGGGTGCAGTTGGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: SNGRRPGYLSHCSARWEQHRCRR*GAVGAV
Trigger: GACAGCTCCAACTGCACCCAACCGCCGGCACCGGTG...CTGCTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CAA 90 bp ACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTCACCGGTGCCGGCGGTaGGGTGCAGTTGGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: TATEECVVQWCLNRAPWCHRCRR*GAVGAV
Trigger: GACAGCTCCAACTGCACCCAACCGCCGGCACCGGTG...ACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp TCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGCCGAGCAGAATGGCCTaGGAAATGTTCACCGGTGCC +
Preference number: 5 (lower is better)
Translates to: SKDSGSQDQWWVSCSPSLPSRMA*EMFTGA
Trigger: GGCACCGGTGAACATTTCCAAGGCCATTCTGCTCGG...CAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp AGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCGTCTTGAGGCCAGACTaGAGGCCCCGGCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: SPVVLKPCSMVYYVPSRGVLRPD*RPRLSL
Trigger: GAGGGAGAGCCGGGGCCTCAAGTCTGGCCTCAAGAC...GCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp TGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGTGTTCCGACTTGTCGGTCTaGAGGCCAGACTTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: WAVRTTVVDGKLASCHGCSDLSV*RPDLRP
Trigger: GGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGA...ACACCCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp CCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTGCTCCGAGTCCGACTaGTCGGTCTTGAGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: PVVLKPCSMVYYVPSRGPCSESD*SVLRPD
Trigger: GTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCA...GGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp AAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGTGTGTGTCCCTTGCTCCGAGTCCGACTaGTCGGTCTTGAGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: KDNSRGREAGFMSWVCVPCSESD*SVLRPD
Trigger: GTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCA...AGGGACACACACCCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp CCCCATTCCCAGCAGGTCCCCTCTTTGATTGGTCCTGTCTTGTCCTCCAAGAAGGATGCGGAGCGTCACTaGCTCCGAGTCCGACTTGTC +
Preference number: 5 (lower is better)
Translates to: PHSQQVPSLIGPVLSSKKDAERH*LRVRLV
Trigger: GACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATC...CTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp CAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGAGATGCGGAGCGTCACTaGCTCCGAGTCCGACTTGTC +
Preference number: 5 (lower is better)
Translates to: QWWVSCSPSLGSKDNSRGDAERH*LRVRLV
Trigger: GACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATC...TCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp ATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTCACCATGTCCTTGTGTaGCCCTTCCACGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: IPKTVGRRTSGGFHAPLPHHVLV*PFHGLA
Trigger: AGCCAGGCCGTGGAAGGGCAACACAAGGACATGGTG...AGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS CCA 90 bp CTGGTGACAGAGCGAGACTTCGTCCGGGCTGTGGTACAGGAGGATTaGTCTTTGGACACTGTAATCCTGGCAGATCCACGGGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: LVTERDFVRAVVQED*SLDTVILADPRGME
Trigger: TTCCATGCCCCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGACGAAGTCTCGCTCTGTCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR CAA 90 bp CAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACCCTGCCAGGTGGGTTaGGCTGGGGGTGAGAGCGCG +
Preference number: 5 (lower is better)
Translates to: QVLTMKPTGPEGWDIQFSPCQVG*AGGESA
Trigger: CGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGGG...TGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp GCGAGACTTCGTCTGATTTTCCTGGGTCAGTCCCTATTAAACATGGGTGTTTCACCCTGCCAGGTGGGTTaGGCTGGGGGTGAGAGCGCG +
Preference number: 5 (lower is better)
Translates to: ARLRLIFLGQSLLNMGVSPCQVG*AGGESA
Trigger: CGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGGG...TGAAACACCCATGTTTAATAGGGACTGACCCAGGAAAATCAGACGAAGTCTCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519096.5
CDS-3UTR CAA 90 bp ATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTCCGAGCAGAATGGCCTaGGAAATGTTCACCGGTGCC +
Preference number: 5 (lower is better)
Translates to: IPKTVGRRTSGGFHAPLPPSRMA*EMFTGA
Trigger: GGCACCGGTGAACATTTCCAAGGCCATTCTGCTCGG...AGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp CTCACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGGTCTTGAGGCCAGACTaGAGGCCCCGGCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: LTVVQDGSRNPINSSCQKVLRPD*RPRLSL
Trigger: GAGGGAGAGCCGGGGCCTCAAGTCTGGCCTCAAGAC...CTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CAA 90 bp GTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGATGCGGAGCGTCACTaGCTCCGAGTCCGACTTGTC +
Preference number: 5 (lower is better)
Translates to: VLKPCSMVYYVPSRGPSPDAERH*LRVRLV
Trigger: GACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATC...TGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp AGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCAAGTGCGTCTTGGTCTaGGCGCTGGCCATCCCGCTG +
Preference number: 5 (lower is better)
Translates to: SPVVLKPCSMVYYVPSRGKCVLV*ALAIPL
Trigger: CAGCGGGATGGCCAGCGCCAAGACCAAGACGCACTT...GCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp CCCCATTCCCAGCAGGTCCCCTCTTTGATTGGTCCTGTCTTGTCCTCCAAGAAGACTGAGAAGTGCGTCTaGGTCTTGGCGCTGGCCATC +
Preference number: 5 (lower is better)
Translates to: PHSQQVPSLIGPVLSSKKTEKCV*VLALAI
Trigger: GATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGT...CTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp CCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCACTGAGAAGTGCGTCTaGGTCTTGGCGCTGGCCATC +
Preference number: 5 (lower is better)
Translates to: PVVLKPCSMVYYVPSRGPTEKCV*VLALAI
Trigger: GATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGT...GGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp AAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGTGTGTGTCCCTACTGAGAAGTGCGTCTaGGTCTTGGCGCTGGCCATC +
Preference number: 5 (lower is better)
Translates to: KDNSRGREAGFMSWVCVPTEKCV*VLALAI
Trigger: GATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGT...AGGGACACACACCCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp CTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTTGTAGAAGGTCTCTCTaGATCCCACGGGGATGCGCA +
Preference number: 5 (lower is better)
Translates to: LGWIPKTVGRRTSGGFHACRRSL*IPRGCA
Trigger: TGCGCATCCCCGTGGGATCAAGAGAGACCTTCTACA...AGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR CAA 90 bp GGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCAGGAGGATTGGTCTTaGGACACTGTAATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GLLGWIPKTVGRRTSGGFQEDWS*DTVILA
Trigger: TGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTG...AAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR CAA 90 bp GGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCAGGCAGGGACCGATGGTaGGGTAGCGCAGCGCTACAG +
Preference number: 5 (lower is better)
Translates to: GHRVTKKALAAGKCCSVSGRDRW*GSAALQ
Trigger: CTGTAGCGCTGCGCTACCCAACCATCGGTCCCTGCC...TGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp CAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTGGTGGTTCTGAGTGGTaGGGGTCTTACCCCACTCCC +
Preference number: 5 (lower is better)
Translates to: QWCLNRAPWCTMYPLEAPGGSEW*GSYPTP
Trigger: GGGAGTGGGGTAAGACCCCAACCACTCAGAACCACC...AGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp TGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGGGTGGTTCTGAGTGGTaGGGGTCTTACCCCACTCCC +
Preference number: 5 (lower is better)
Translates to: CLNRAPWCTMYPLEAPHQGGSEW*GSYPTP
Trigger: GGGAGTGGGGTAAGACCCCAACCACTCAGAACCACC...CTGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS CCA 90 bp CTTCATGTCATGGGTGTGTGTCCCCGGGCTGTGGTACAGGAGGATTaGTCTTTGGACACTGTAATCCTGGCAGATCCACGGGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: LHVMGVCPRAVVQED*SLDTVILADPRGME
Trigger: TTCCATGCCCCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGGGACACACACCCATGACATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380582.7
CDS CCA 90 bp GGTGACACAGCAAGACCATGTCTGTTAATGTGGCAGCCAGTGTGGTaGGGTAGAGAGTGTGGTGTGGAAGGAACCCACCAGGCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: GDTARPCLLMWQPVW*GRECGVEGTHQALC
Trigger: ACAGAGAGCCTGGTGGGTTCCTTCCACACCACACTCTCTACCCCACCACACTGGCTGCCACATTAACAGACATGGTCTTGCTGTGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518810.1
CDS-3UTR CAA 90 bp GATGATATGCTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCACCCTGCCAGGTGGGTTaGGCTGGGGGTGAGAGCGCG +
Preference number: 5 (lower is better)
Translates to: DDMLSNGRRPGYLSHCSAPCQVG*AGGESA
Trigger: CGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGGG...TGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATATCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CAA 90 bp GCGAGACTTCGTCTGATTTTCCTGGGTCAGTCCCTATTAAACATGGGTGTTTCACACCGGTGCCGGCGGTaGGGTGCAGTTGGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: ARLRLIFLGQSLLNMGVSHRCRR*GAVGAV
Trigger: GACAGCTCCAACTGCACCCAACCGCCGGCACCGGTG...TGAAACACCCATGTTTAATAGGGACTGACCCAGGAAAATCAGACGAAGTCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519096.5
CDS-3UTR CAA 90 bp GTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCACCGAGCAGAATGGCCTaGGAAATGTTCACCGGTGCC +
Preference number: 5 (lower is better)
Translates to: VLKPCSMVYYVPSRGPSPPSRMA*EMFTGA
Trigger: GGCACCGGTGAACATTTCCAAGGCCATTCTGCTCGG...TGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp CCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCGTCTTGAGGCCAGACTaGAGGCCCCGGCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: PGLNHETYWARRLGYPVFVLRPD*RPRLSL
Trigger: GAGGGAGAGCCGGGGCCTCAAGTCTGGCCTCAAGAC...GAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp ATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTGTCTTGAGGCCAGACTaGAGGCCCCGGCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: MCSPVVLKPCSMVYYVPSVLRPD*RPRLSL
Trigger: GAGGGAGAGCCGGGGCCTCAAGTCTGGCCTCAAGAC...AGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp AGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCGATGCGGAGCGTCACTaGCTCCGAGTCCGACTTGTC +
Preference number: 5 (lower is better)
Translates to: SPVVLKPCSMVYYVPSRGDAERH*LRVRLV
Trigger: GACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATC...GCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp GGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTGACTGAGAAGTGCGTCTaGGTCTTGGCGCTGGCCATC +
Preference number: 5 (lower is better)
Translates to: GLPRRKWGGYLRLFPFPLTEKCV*VLALAI
Trigger: GATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGT...CAGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp TGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGACTGAGAAGTGCGTCTaGGTCTTGGCGCTGGCCATC +
Preference number: 5 (lower is better)
Translates to: CLNRAPWCTMYPLEAPHQTEKCV*VLALAI
Trigger: GATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGT...CTGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp CCCCATTCCCAGCAGGTCCCCTCTTTGATTGGTCCTGTCTTGTCCTCCAAGAAGCAAATCCTTGTCCTTTaGCACCCGCTGACTCACCCC +
Preference number: 5 (lower is better)
Translates to: PHSQQVPSLIGPVLSSKKQILVL*HPLTHP
Trigger: GGGGTGAGTCAGCGGGTGCAAAAGGACAAGGATTTG...CTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp CCCCATTCCCAGCAGGTCCCCTCTTTGATTGGTCCTGTCTTGTCCTCCAAGAAGGCAGTTACCTACATTTaGAGCTGCCCCACCGAAGGC +
Preference number: 5 (lower is better)
Translates to: PHSQQVPSLIGPVLSSKKAVTYI*SCPTEG
Trigger: GCCTTCGGTGGGGCAGCTCAAAATGTAGGTAACTGC...CTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp GACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTCCAATCCGTTCATCCTaGCAGCTGCTTCTCAAAATC +
Preference number: 5 (lower is better)
Translates to: DSGSQDQWWVSCSPSLGSPIRSS*QLLLKI
Trigger: GATTTTGAGAAGCAGCTGCAAGGATGAACGGATTGG...ACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS TCA 90 bp TTCACAAACGCCATCCGTCTTGGAGATCCTGTAGAAGGTCTCTCTTaGTCCCACGGGGATGCGCACCATGTCCTTGTGTTGCCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: FTNAIRLGDPVEGLS*SHGDAHHVLVLPFH
Trigger: GTGGAAGGGCAACACAAGGACATGGTGCGCATCCCCGTGGGATCAAGAGAGACCTTCTACAGGATCTCCAAGACGGATGGCGTTTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000518621.1
ENST00000519229.5
CDS TCA 90 bp CCGTTCTCACTGAGGGAGATGGTGTGGACCTTAATGGTTGGAACTTaGTGGTTCTTGTCAAGGCTGGGGGTTGAGGGCCCTACACAGCAG +
Preference number: 5 (lower is better)
Translates to: PFSLREMVWTLMVGT*WFLSRLGVEGPTQQ
Trigger: CTGCTGTGTAGGGCCCTCAACCCCCAGCCTTGACAAGAACCATCAAGTTCCAACCATTAAGGTCCACACCATCTCCCTCAGTGAGAACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp GTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTCACCGGTGCCGGCGGTaGGGTGCAGTTGGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: VLTMKPTGPEGWDIQFSLHRCRR*GAVGAV
Trigger: GACAGCTCCAACTGCACCCAACCGCCGGCACCGGTG...AAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp ACTCCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCCACCGGTGCCGGCGGTaGGGTGCAGTTGGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: TPALDSSLVIHQYCLKLSHRCRR*GAVGAV
Trigger: GACAGCTCCAACTGCACCCAACCGCCGGCACCGGTG...GCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp GGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCAACTGCCGCCCAGATGTaGCAGAAGACCCTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: GHRVTKKALAAGKCCSVSTAAQM*QKTLPK
Trigger: CTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAGT...TGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp TCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGCAGACTGCCGCCCAGATGTaGCAGAAGACCCTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: SNGRRPGYLSHCSARWEQTAAQM*QKTLPK
Trigger: CTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAGT...CTGCTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CAA 90 bp AGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGCAGGAACCCAATTGCTCCGAGTCCGACTaGTCGGTCTTGAGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: RRPGYLSHCSARWEQEPNCSESD*SVLRPD
Trigger: GTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCA...ATTGGGTTCCTGCTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CAA 90 bp CAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCGATGCGGAGCGTCACTaGCTCCGAGTCCGACTTGTC +
Preference number: 5 (lower is better)
Translates to: QGNAVPYHSELVGCETPSDAERH*LRVRLV
Trigger: GACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATC...GGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp TGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGTTCTCCCGGGAGAACTaGAGGAGCCTCACTGAGAAG +
Preference number: 5 (lower is better)
Translates to: CLNRAPWCTMYPLEAPHQFSREN*RSLTEK
Trigger: CTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGAA...CTGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp CTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATTTCTCCCGGGAGAACTaGAGGAGCCTCACTGAGAAG +
Preference number: 5 (lower is better)
Translates to: LPWAVRTTVVDGKLASCHFSREN*RSLTEK
Trigger: CTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGAA...ATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp CAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCCACCATGTCCTTGTGTaGCCCTTCCACGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: QGNAVPYHSELVGCETPSHHVLV*PFHGLA
Trigger: AGCCAGGCCGTGGAAGGGCAACACAAGGACATGGTG...GGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp ACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTCACCATGTCCTTGTGTaGCCCTTCCACGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: TATEECVVQWCLNRAPWCHHVLV*PFHGLA
Trigger: AGCCAGGCCGTGGAAGGGCAACACAAGGACATGGTG...ACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR CAA 90 bp CAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCATGCGCACCATGTCCTaGTGTTGCCCTTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: QGNAVPYHSELVGCETPSMRTMS*CCPSTA
Trigger: GGCCGTGGAAGGGCAACACAAGGACATGGTGCGCAT...GGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp GGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCAATGCGCACCATGTCCTaGTGTTGCCCTTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: GHRVTKKALAAGKCCSVSMRTMS*CCPSTA
Trigger: GGCCGTGGAAGGGCAACACAAGGACATGGTGCGCAT...TGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCTGTCAAGGCTGGGGGTaGAGGGCCCTACACAGCAGC +
Preference number: 5 (lower is better)
Translates to: LKWAQSDQESISCREMLFCQGWG*RALHSS
Trigger: GCTGCTGTGTAGGGCCCTCAACCCCCAGCCTTGACA...GAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp GGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTGCAGCAGGTCCCCTCTTaGATTGGTCCTGTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: GLPRRKWGGYLRLFPFPLQQVPS*IGPVLS
Trigger: GGACAAGACAGGACCAATCAAAGAGGGGACCTGCTG...CAGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS GCA 90 bp CTCCCTCCCTACCCGAAGCTGGGTGCGAAGATCCAGGAGACTCCTTaGAACATGCAATTCCAGAATTACGAGAATCTGCTTTTCCGCGCT +
Preference number: 5 (lower is better)
Translates to: LPPYPKLGAKIQETP*NMQFQNYENLLFRA
Trigger: AGCGCGGAAAAGCAGATTCTCGTAATTCTGGAATTGCATGTTGCAAGGAGTCTCCTGGATCTTCGCACCCAGCTTCGGGTAGGGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS CCA 90 bp GCTGCTTCTCAAAATCCAGAAGACCGGGCTGTGGTACAGGAGGATTaGTCTTTGGACACTGTAATCCTGGCAGATCCACGGGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: AASQNPEDRAVVQED*SLDTVILADPRGME
Trigger: TTCCATGCCCCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGTCTTCTGGATTTTGAGAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR CAA 90 bp TCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGATCCAGGAGACTCCTaGCAACATGCAATTCCAGAA +
Preference number: 5 (lower is better)
Translates to: SKDSGSQDQWWVSCSPSLDPGDS*QHAIPE
Trigger: TTCTGGAATTGCATGTTGCAAGGAGTCTCCTGGATC...CAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CAA 90 bp CCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTGCCGCCCAGATGTaGCAGAAGACCCTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: PGLNHETYWARRLGYPVFTAAQM*QKTLPK
Trigger: CTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAGT...GAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp GATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGACTGCCGCCCAGATGTaGCAGAAGACCCTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: DNCHRRMCSPVVLKPCSMTAAQM*QKTLPK
Trigger: CTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAGT...CATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCTCCGACTTGTCGGTCTaGAGGCCAGACTTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: LKWAQSDQESISCREMLFSDLSV*RPDLRP
Trigger: GGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGA...GAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp ATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTTCCGACTTGTCGGTCTaGAGGCCAGACTTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: MCSPVVLKPCSMVYYVPSSDLSV*RPDLRP
Trigger: GGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGA...AGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp CCTGGGTCAGTCCCTATTAAACATGGGTGTTTCACTTCTCAGCTGTGGATAGCATCCGACTTGTCGGTCTaGAGGCCAGACTTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: PGSVPIKHGCFTSQLWIASDLSV*RPDLRP
Trigger: GGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGA...TGCTATCCACAGCTGAGAAGTGAAACACCCATGTTTAATAGGGACTGACCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519096.5
ENST00000521711.5
CDS-3UTR CAA 90 bp TGTTCTCACTACCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATGATGCGGAGCGTCACTaGCTCCGAGTCCGACTTGTC +
Preference number: 5 (lower is better)
Translates to: CSHYQVLTMKPTGPEGWDDAERH*LRVRLV
Trigger: GACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATC...ATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGGTAGTGAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp CTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGGATGCGGAGCGTCACTaGCTCCGAGTCCGACTTGTC +
Preference number: 5 (lower is better)
Translates to: LSNGRRPGYLSHCSARWEDAERH*LRVRLV
Trigger: GACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATC...CTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CAA 90 bp CACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATAAGTGCGTCTTGGTCTaGGCGCTGGCCATCCCGCTG +
Preference number: 5 (lower is better)
Translates to: HRRMCSPVVLKPCSMVYYKCVLV*ALAIPL
Trigger: CAGCGGGATGGCCAGCGCCAAGACCAAGACGCACTT...ATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp GGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCACTGTTTCAGAGGGCTaGAAATCAGGGAAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: GVDSKDSGSQDQWWVSCSTVSEG*KSGKKD
Trigger: GTCTTTCTTCCCTGATTTCAAGCCCTCTGAAACAGT...GGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR CAA 90 bp TCATGCTCCCCTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCACTGTTTCAGAGGGCTaGAAATCAGGGAAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: SCSPSLGSKDNSRGREAGTVSEG*KSGKKD
Trigger: GTCTTTCTTCCCTGATTTCAAGCCCTCTGAAACAGT...GCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAGGGGAGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR CAA 90 bp CTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTAGGAACAAGCGATGTCCACCATGTCCTTGTGTaGCCCTTCCACGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LLGQKVGISSFHLGTSDVHHVLV*PFHGLA
Trigger: AGCCAGGCCGTGGAAGGGCAACACAAGGACATGGTG...GACATCGCTTGTTCCTAAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp GACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAATGGGGGAGGGAGGTaGTATGAAACTGATTTACAA +
Preference number: 5 (lower is better)
Translates to: DSGSQDQWWVSCSPSLGSNGGGR*YETDLQ
Trigger: TTGTAAATCAGTTTCATACAACCTCCCTCCCCCATT...ACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS GCA 90 bp TCTCTCTCTCTCTGCCTCTCTCTCTCTCTGCTGTCCACTTGGCTTTaGTATTCCATAGAAGGTGGATGCCACTCTGGAAAGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SLSLCLSLSLLSTWL*YSIEGGCHSGKEEE
Trigger: CTCCTCCTCCTTTCCAGAGTGGCATCCACCTTCTATGGAATAGCAAAGCCAAGTGGACAGCAGAGAGAGAGAGAGGCAGAGAGAGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518810.1
CDS CCA 90 bp GCTGTCCACTTGGCTTTGCTATTCCATAGAAGGTGGATGCCACTCTaGAAAGGAGGAGGAGTGTCCCCTTTAGCCAGAACAAGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: AVHLALLFHRRWMPL*KGGGVSPLARTRKR
Trigger: CCTCTTCCTTGTTCTGGCTAAAGGGGACACTCCTCCTCCTTTCCAGAGTGGCATCCACCTTCTATGGAATAGCAAAGCCAAGTGGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518810.1
CDS CCA 90 bp TGCCTCTCTCTCTCTCTCTGCCTCTCTCTCTCTCTGCTGTCCACTTaGCTTTGCTATTCCATAGAAGGTGGATGCCACTCTGGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: CLSLSLCLSLSLLST*LCYSIEGGCHSGKE
Trigger: CTCCTTTCCAGAGTGGCATCCACCTTCTATGGAATAGCAAAGCCAAGTGGACAGCAGAGAGAGAGAGAGGCAGAGAGAGAGAGAGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518810.1
CDS-3UTR CAA 90 bp TGTTCTCACTACCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATGGCGGTTGGGTGCAGTaGGAGCTGTCGGAAGCATTT +
Preference number: 5 (lower is better)
Translates to: CSHYQVLTMKPTGPEGWDGGWVQ*ELSEAF
Trigger: AAATGCTTCCGACAGCTCCAACTGCACCCAACCGCC...ATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGGTAGTGAGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp ATCTCTCTCACTGTAGTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCGGCGGTTGGGTGCAGTaGGAGCTGTCGGAAGCATTT +
Preference number: 5 (lower is better)
Translates to: ISLTVVQDGSRNPINSSCGGWVQ*ELSEAF
Trigger: AAATGCTTCCGACAGCTCCAACTGCACCCAACCGCC...GCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCACTACAGTGAGAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CAA 90 bp GACTTCAGTAGAGCGGGTTCTCAAGTTGAGGATCCCTCTCATTTCCTCATTAGCGGCGGTTGGGTGCAGTaGGAGCTGTCGGAAGCATTT +
Preference number: 5 (lower is better)
Translates to: DFSRAGSQVEDPSHFLISGGWVQ*ELSEAF
Trigger: AAATGCTTCCGACAGCTCCAACTGCACCCAACCGCC...GCTAATGAGGAAATGAGAGGGATCCTCAACTTGAGAACCCGCTCTACTGAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR CAA 90 bp CTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGCCGAGCAGAATGGCCTaGGAAATGTTCACCGGTGCC +
Preference number: 5 (lower is better)
Translates to: LSNGRRPGYLSHCSARWEPSRMA*EMFTGA
Trigger: GGCACCGGTGAACATTTCCAAGGCCATTCTGCTCGG...CTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CAA 90 bp GGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTCCGACTTGTCGGTCTaGAGGCCAGACTTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: GLNHETYWARRLGYPVFTSDLSV*RPDLRP
Trigger: GGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGA...AGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp ATGATGCTCAGGTCTATTGTTTTCTCTTGGGAAAAGCCATACCACCCTGGTTGGTCCGACTTGTCGGTCTaGAGGCCAGACTTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: MMLRSIVFSWEKPYHPGWSDLSV*RPDLRP
Trigger: GGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGA...CCAACCAGGGTGGTATGGCTTTTCCCAAGAGAAAACAATAGACCTGAGCATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp CACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATTGCTCCGAGTCCGACTaGTCGGTCTTGAGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: HRRMCSPVVLKPCSMVYYCSESD*SVLRPD
Trigger: GTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCA...ATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp GTGTCCCTGATTTTCCTGGGTCAGTCCCTATTAAACATGGGTGTTTCACTTCTCGATGCGGAGCGTCACTaGCTCCGAGTCCGACTTGTC +
Preference number: 5 (lower is better)
Translates to: VSLIFLGQSLLNMGVSLLDAERH*LRVRLV
Trigger: GACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATC...GAGAAGTGAAACACCCATGTTTAATAGGGACTGACCCAGGAAAATCAGGGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521711.5
CDS-3UTR CAA 90 bp GAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTAAGTGCGTCTTGGTCTaGGCGCTGGCCATCCCGCTG +
Preference number: 5 (lower is better)
Translates to: ESISCREMLFRIILNWLVKCVLV*ALAIPL
Trigger: CAGCGGGATGGCCAGCGCCAAGACCAAGACGCACTT...AACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp GTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATATGTATAAGTGCGTCTTGGTCTaGGCGCTGGCCATCCCGCTG +
Preference number: 5 (lower is better)
Translates to: VQDGSRNPINSSCQKNMYKCVLV*ALAIPL
Trigger: CAGCGGGATGGCCAGCGCCAAGACCAAGACGCACTT...ATACATATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CAA 90 bp TCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGCAGTTCTCCCGGGAGAACTaGAGGAGCCTCACTGAGAAG +
Preference number: 5 (lower is better)
Translates to: SNGRRPGYLSHCSARWEQFSREN*RSLTEK
Trigger: CTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGAA...CTGCTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CAA 90 bp GGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCGGGTATATGATGGGGTaGATGCAGCTGTTTAGATAT +
Preference number: 5 (lower is better)
Translates to: GVDSKDSGSQDQWWVSCSGYMMG*MQLFRY
Trigger: ATATCTAAACAGCTGCATCAACCCCATCATATACCC...GGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR CAA 90 bp GGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGGACAGGGTATATGATGGGGTaGATGCAGCTGTTTAGATAT +
Preference number: 5 (lower is better)
Translates to: GRRTSGGFHAPLPWAVRTGYMMG*MQLFRY
Trigger: ATATCTAAACAGCTGCATCAACCCCATCATATACCC...TGTCCTTACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR CAA 90 bp CAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCAATGCGCACCATGTCCTaGTGTTGCCCTTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: QVLTMKPTGPEGWDIQFSMRTMS*CCPSTA
Trigger: GGCCGTGGAAGGGCAACACAAGGACATGGTGCGCAT...TGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp CACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATATGCGCACCATGTCCTaGTGTTGCCCTTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: HRRMCSPVVLKPCSMVYYMRTMS*CCPSTA
Trigger: GGCCGTGGAAGGGCAACACAAGGACATGGTGCGCAT...ATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR CAA 90 bp AACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTGTAGAAGGTCTCTCTaGATCCCACGGGGATGCGCA +
Preference number: 5 (lower is better)
Translates to: NCHRRMCSPVVLKPCSMVCRRSL*IPRGCA
Trigger: TGCGCATCCCCGTGGGATCAAGAGAGACCTTCTACA...CACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR CAA 90 bp TGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCCCCTCACCAGCAGGAGGATTGGTCTTaGGACACTGTAATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: CLNRAPWCTMYPLEAPHQQEDWS*DTVILA
Trigger: TGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTG...CTGGTGAGGGGCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR CAA 90 bp GTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTGTGGTACAGGAGGATaGGTCTTTGGACACTGTAAT +
Preference number: 5 (lower is better)
Translates to: VDSKDSGSQDQWWVSCSPCGTGG*VFGHCN
Trigger: ATTACAGTGTCCAAAGACCAATCCTCCTGTACCACA...AGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR CAA 90 bp AAGGCTCCTGGGCTCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTAGTAACAGTAACATGTaGGATTTGTGCCTTAGTCAG +
Preference number: 5 (lower is better)
Translates to: KAPGLLGWIPKTVGRRTSSNSNM*DLCLSQ
Trigger: CTGACTAAGGCACAAATCCAACATGTTACTGTTACT...ACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGAGCCCAGGAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp GTAGAGCGGGTTCTCAAGTTGAGGATCCCTCTCATTTCCTCATTAGCCAGGCTGGAGCGGGTTCTCAAGTaGAGGATCCCTCTCATTTCC +
Preference number: 5 (lower is better)
Translates to: VERVLKLRIPLISSLARLERVLK*RIPLIS
Trigger: GGAAATGAGAGGGATCCTCAACTTGAGAACCCGCTC...CAGCCTGGCTAATGAGGAAATGAGAGGGATCCTCAACTTGAGAACCCGCTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS CCA 90 bp AAATATCTACAATCCATTCCCCTCCGGGCTGTGGTACAGGAGGATTaGTCTTTGGACACTGTAATCCTGGCAGATCCACGGGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: KYLQSIPLRAVVQED*SLDTVILADPRGME
Trigger: TTCCATGCCCCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGAGGGGAATGGATTGTAGATATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp GGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTGGATCCAGGAGACTCCTaGCAACATGCAATTCCAGAA +
Preference number: 5 (lower is better)
Translates to: GLPRRKWGGYLRLFPFPLDPGDS*QHAIPE
Trigger: TTCTGGAATTGCATGTTGCAAGGAGTCTCCTGGATC...CAGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp AAGATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCAGGCGGTTGGGTGCAGTaGGAGCTGTCGGAAGCATTT +
Preference number: 5 (lower is better)
Translates to: KITATEECVVQWCLNRAPGGWVQ*ELSEAF
Trigger: AAATGCTTCCGACAGCTCCAACTGCACCCAACCGCC...TGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp GAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTACTGCCGCCCAGATGTaGCAGAAGACCCTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: ESISCREMLFRIILNWLVTAAQM*QKTLPK
Trigger: CTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAGT...AACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp TCAGTCCCTATTAAACATGGGTGTTTCACTTCTCAGCTGTGGATAGCACACTCAACTGCCGCCCAGATGTaGCAGAAGACCCTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: SVPIKHGCFTSQLWIAHSTAAQM*QKTLPK
Trigger: CTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAGT...TGAGTGTGCTATCCACAGCTGAGAAGTGAAACACCCATGTTTAATAGGGACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519096.5
ENST00000521711.5
CDS-3UTR CAA 90 bp GCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCATTAGTGTCTTGAGGCCAGACTaGAGGCCCCGGCTCTCCCTC +
Preference number: 5 (lower is better)
Translates to: ALDSSLVIHQYCLKLSISVLRPD*RPRLSL
Trigger: GAGGGAGAGCCGGGGCCTCAAGTCTGGCCTCAAGAC...ACTAATGCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp GAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTTGCTCCGAGTCCGACTaGTCGGTCTTGAGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: ESISCREMLFRIILNWLVCSESD*SVLRPD
Trigger: GTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCA...AACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp TCACTTAGGAACAAGCGATGTCACATAATACATAGCCATAGCTTCCAGCTGACTAAGTGCGTCTTGGTCTaGGCGCTGGCCATCCCGCTG +
Preference number: 5 (lower is better)
Translates to: SLRNKRCHIIHSHSFQLTKCVLV*ALAIPL
Trigger: CAGCGGGATGGCCAGCGCCAAGACCAAGACGCACTT...AGTCAGCTGGAAGCTATGGCTATGTATTATGTGACATCGCTTGTTCCTAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp CAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCAACTGAGAAGTGCGTCTaGGTCTTGGCGCTGGCCATC +
Preference number: 5 (lower is better)
Translates to: QVLTMKPTGPEGWDIQFSTEKCV*VLALAI
Trigger: GATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGT...TGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp TTCTGTTTCCCATGGTGGTTTTCGTTGAAGTGGGCACAGAGTGACCAAGAAAGCTTCTCCCGGGAGAACTaGAGGAGCCTCACTGAGAAG +
Preference number: 5 (lower is better)
Translates to: FCFPWWFSLKWAQSDQESFSREN*RSLTEK
Trigger: CTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGAA...GCTTTCTTGGTCACTCTGTGCCCACTTCAACGAAAACCACCATGGGAAACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCTTCTCCCGGGAGAACTaGAGGAGCCTCACTGAGAAG +
Preference number: 5 (lower is better)
Translates to: LKWAQSDQESISCREMLFFSREN*RSLTEK
Trigger: CTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGAA...GAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp CCTGGGTCAGTCCCTATTAAACATGGGTGTTTCACTTCTCAGCTGTGGATAGCATTCTCCCGGGAGAACTaGAGGAGCCTCACTGAGAAG +
Preference number: 5 (lower is better)
Translates to: PGSVPIKHGCFTSQLWIAFSREN*RSLTEK
Trigger: CTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGAA...TGCTATCCACAGCTGAGAAGTGAAACACCCATGTTTAATAGGGACTGACCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519096.5
ENST00000521711.5
CDS-3UTR CAA 90 bp AAGAGCTGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTATCATTCTGAACTGGTaGGTTGTGAGACACCCTCCC +
Preference number: 5 (lower is better)
Translates to: KSWPSEKEVGWVPKIIPLIILNW*VVRHPP
Trigger: GGGAGGGTGTCTCACAACCAACCAGTTCAGAATGAT...AAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCAGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp ACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAAGTAACATGTTGGATTaGTGCCTTAGTCAGATGGAT +
Preference number: 5 (lower is better)
Translates to: TVGRRTSGGFHAPLPWAVSNMLD*CLSQMD
Trigger: ATCCATCTGACTAAGGCACAAATCCAACATGTTACT...TACTGCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp GGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCAGTAACATGTTGGATTaGTGCCTTAGTCAGATGGAT +
Preference number: 5 (lower is better)
Translates to: GVDSKDSGSQDQWWVSCSSNMLD*CLSQMD
Trigger: ATCCATCTGACTAAGGCACAAATCCAACATGTTACT...GGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp AAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGCTCCCCTTCCTTGGGCAGTAACAGTAACATGTaGGATTTGTGCCTTAGTCAG +
Preference number: 5 (lower is better)
Translates to: KDSGSQDQWWVSCSPSLGSNSNM*DLCLSQ
Trigger: CTGACTAAGGCACAAATCCAACATGTTACTGTTACT...GCCCAAGGAAGGGGAGCATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS GCA 90 bp CCTACCCGAAGCTGGGTGCGAAGATCCAGGAGACTCCTTGCAACATaGAATTCCAGAATTACGAGAATCTGCTTTTCCGCGCTGTCTTAT +
Preference number: 5 (lower is better)
Translates to: PTRSWVRRSRRLLAT*NSRITRICFSALSY
Trigger: ATAAGACAGCGCGGAAAAGCAGATTCTCGTAATTCTGGAATTGCATGTTGCAAGGAGTCTCCTGGATCTTCGCACCCAGCTTCGGGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS-3UTR CAA 90 bp GTAACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCCTGCCAGGTGGGTTaGGCTGGGGGTGAGAGCGCG +
Preference number: 5 (lower is better)
Translates to: VTCWICALVRWMLDKEVNPCQVG*AGGESA
Trigger: CGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGGG...ATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000521711.5
CDS-3UTR CAA 90 bp ACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCACACCGGTGCCGGCGGTaGGGTGCAGTTGGAGCTGTC +
Preference number: 5 (lower is better)
Translates to: TCWICALVRWMLDKEVNPHRCRR*GAVGAV
Trigger: GACAGCTCCAACTGCACCCAACCGCCGGCACCGGTG...TGGATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp CAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGCCGAGCAGAATGGCCTaGGAAATGTTCACCGGTGCC +
Preference number: 5 (lower is better)
Translates to: QESISCREMLFRIILNWLPSRMA*EMFTGA
Trigger: GGCACCGGTGAACATTTCCAAGGCCATTCTGCTCGG...CAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp TGGGAAGGTAAGATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCCGAGCAGAATGGCCTaGGAAATGTTCACCGGTGCC +
Preference number: 5 (lower is better)
Translates to: WEGKITATEECVVQWCLNPSRMA*EMFTGA
Trigger: GGCACCGGTGAACATTTCCAAGGCCATTCTGCTCGG...GTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTTACCTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp ATGATATGCTTTCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAATCCGACTTGTCGGTCTaGAGGCCAGACTTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: MICFPMVGDQVISLTVVQSDLSV*RPDLRP
Trigger: GGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGA...TTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGAAAGCATATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CAA 90 bp TCACTTAGGAACAAGCGATGTCACATAATACATAGCCATAGCTTCCAGCTGACTTGCTCCGAGTCCGACTaGTCGGTCTTGAGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: SLRNKRCHIIHSHSFQLTCSESD*SVLRPD
Trigger: GTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCA...AGTCAGCTGGAAGCTATGGCTATGTATTATGTGACATCGCTTGTTCCTAAGTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp GTGCAAGATGGGAGCAGGAACCCAATTAACAGTTCCTGCCAGAAGAATATGTATACTGAGAAGTGCGTCTaGGTCTTGGCGCTGGCCATC +
Preference number: 5 (lower is better)
Translates to: VQDGSRNPINSSCQKNMYTEKCV*VLALAI
Trigger: GATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGT...ATACATATTCTTCTGGCAGGAACTGTTAATTGGGTTCCTGCTCCCATCTTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CAA 90 bp GGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTGTAGAAGGTCTCTCTaGATCCCACGGGGATGCGCA +
Preference number: 5 (lower is better)
Translates to: GLNHETYWARRLGYPVFTCRRSL*IPRGCA
Trigger: TGCGCATCCCCGTGGGATCAAGAGAGACCTTCTACA...AGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp TCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATACCGCTGCCTGATGAGTaGGGTCTACCACCCACCCCA +
Preference number: 5 (lower is better)
Translates to: SPHFHQEIAPNLECVLKIPLPDE*GLPPTP
Trigger: TGGGGTGGGTGGTAGACCCAACTCATCAGGCAGCGG...TATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp GCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCATTAGTCCGCTGCCTGATGAGTaGGGTCTACCACCCACCCCA +
Preference number: 5 (lower is better)
Translates to: ALDSSLVIHQYCLKLSISPLPDE*GLPPTP
Trigger: TGGGGTGGGTGGTAGACCCAACTCATCAGGCAGCGG...ACTAATGCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp GGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCAATCATTCTGAACTGGTaGGTTGTGAGACACCCTCCC +
Preference number: 5 (lower is better)
Translates to: GHRVTKKALAAGKCCSVSIILNW*VVRHPP
Trigger: GGGAGGGTGTCTCACAACCAACCAGTTCAGAATGAT...TGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp TTCTGTTTCCCATGGTGGTTTTCGTTGAAGTGGGCACAGAGTGACCAAGAAAGCCCATGGTGGTTTTCGTaGAAGTGGGCACAGAGTGAC +
Preference number: 5 (lower is better)
Translates to: FCFPWWFSLKWAQSDQESPWWFS*KWAQSD
Trigger: GTCACTCTGTGCCCACTTCAACGAAAACCACCATGG...GCTTTCTTGGTCACTCTGTGCCCACTTCAACGAAAACCACCATGGGAAACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp ATGATGCTCAGGTCTATTGTTTTCTCTTGGGAAAAGCCATACCACCCTGGTTGGGCCATACCACCCTGGTaGGTTCTTTCAACCCTCTCC +
Preference number: 5 (lower is better)
Translates to: MMLRSIVFSWEKPYHPGWAIPPW*VLSTLS
Trigger: GGAGAGGGTTGAAAGAACCAACCAGGGTGGTATGGC...CCAACCAGGGTGGTATGGCTTTTCCCAAGAGAAAACAATAGACCTGAGCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp GGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTGGTCTATTGTTTTCTCTaGGGAAAAGCCATACCACCC +
Preference number: 5 (lower is better)
Translates to: GLPRRKWGGYLRLFPFPLVYCFL*GKAIPP
Trigger: GGGTGGTATGGCTTTTCCCAAGAGAAAACAATAGAC...CAGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp CCCCATTCCCAGCAGGTCCCCTCTTTGATTGGTCCTGTCTTGTCCTCCAAGAAGTCGGGAATAATGTACTaGGATCATAAGGCTCATTCC +
Preference number: 5 (lower is better)
Translates to: PHSQQVPSLIGPVLSSKKSGIMY*DHKAHS
Trigger: GGAATGAGCCTTATGATCCAAGTACATTATTCCCGA...CTTCTTGGAGGACAAGACAGGACCAATCAAAGAGGGGACCTGCTGGGAATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp TCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGAGTAACATGTTGGATTaGTGCCTTAGTCAGATGGAT +
Preference number: 5 (lower is better)
Translates to: SWGGFQRQWVAGPVVGFMSNMLD*CLSQMD
Trigger: ATCCATCTGACTAAGGCACAAATCCAACATGTTACT...CATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp TCCTGGGGTGGATTCCAAAGACAGTGGGTCGCAGGACCAGTGGTGGGTTTCATGAGTAACAGTAACATGTaGGATTTGTGCCTTAGTCAG +
Preference number: 5 (lower is better)
Translates to: SWGGFQRQWVAGPVVGFMSNSNM*DLCLSQ
Trigger: CTGACTAAGGCACAAATCCAACATGTTACTGTTACT...CATGAAACCCACCACTGGTCCTGCGACCCACTGTCTTTGGAATCCACCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp TGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATGGGTGTAATGGGGGAGGGAGGTaGTATGAAACTGATTTACAA +
Preference number: 5 (lower is better)
Translates to: WAVRTTVVDGKLASCHGCNGGGR*YETDLQ
Trigger: TTGTAAATCAGTTTCATACAACCTCCCTCCCCCATT...ACACCCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521711.5
CDS GCA 90 bp TCCAGGAGACTCCTTGCAACATGCAATTCCAGAATTACGAGAATCTaGTTTTCCGCGCTGTCTTATTCGTCCTGGCTGGGGGAAGATTCA +
Preference number: 5 (lower is better)
Translates to: SRRLLATCNSRITRI*FSALSYSSWLGEDS
Trigger: TGAATCTTCCCCCAGCCAGGACGAATAAGACAGCGCGGAAAAGCAGATTCTCGTAATTCTGGAATTGCATGTTGCAAGGAGTCTCCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS-3UTR CAA 90 bp TCCAATGGTAGGAGACCAGGTTATCTCTCTCACTGTAGTGCAAGATGGGAGCAGGATCCAGGAGACTCCTaGCAACATGCAATTCCAGAA +
Preference number: 5 (lower is better)
Translates to: SNGRRPGYLSHCSARWEQDPGDS*QHAIPE
Trigger: TTCTGGAATTGCATGTTGCAAGGAGTCTCCTGGATC...CTGCTCCCATCTTGCACTACAGTGAGAGAGATAACCTGGTCTCCTACCATTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380572.3
CDS-3UTR CAA 90 bp TCACTTAGGAACAAGCGATGTCACATAATACATAGCCATAGCTTCCAGCTGACTCCGAGCAGAATGGCCTaGGAAATGTTCACCGGTGCC +
Preference number: 5 (lower is better)
Translates to: SLRNKRCHIIHSHSFQLTPSRMA*EMFTGA
Trigger: GGCACCGGTGAACATTTCCAAGGCCATTCTGCTCGG...AGTCAGCTGGAAGCTATGGCTATGTATTATGTGACATCGCTTGTTCCTAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp AACTCCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCCGAGCAGAATGGCCTaGGAAATGTTCACCGGTGCC +
Preference number: 5 (lower is better)
Translates to: NSCVRQFFGDPSVLSEAKPSRMA*EMFTGA
Trigger: GGCACCGGTGAACATTTCCAAGGCCATTCTGCTCGG...CTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp TCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATATGCTCCGAGTCCGACTaGTCGGTCTTGAGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: SPHFHQEIAPNLECVLKICSESD*SVLRPD
Trigger: GTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCA...TATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp GTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTTTCTCCCGGGAGAACTaGAGGAGCCTCACTGAGAAG +
Preference number: 5 (lower is better)
Translates to: VLTMKPTGPEGWDIQFSLFSREN*RSLTEK
Trigger: CTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGAA...AAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp TCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATACACCATGTCCTTGTGTaGCCCTTCCACGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: SPHFHQEIAPNLECVLKIHHVLV*PFHGLA
Trigger: AGCCAGGCCGTGGAAGGGCAACACAAGGACATGGTG...TATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp AGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGTACCCTCTAGAGGCTGTGGTACAGGAGGATaGGTCTTTGGACACTGTAAT +
Preference number: 5 (lower is better)
Translates to: SPVVLKPCSMVYYVPSRGCGTGG*VFGHCN
Trigger: ATTACAGTGTCCAAAGACCAATCCTCCTGTACCACA...GCCTCTAGAGGGTACATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR CAA 90 bp CGTGGACGGGAAGCTGGCTTCATGTCATGGGTGTGTGTCCCTTTAAAACACAAGTGTGGTACAGGAGGATaGGTCTTTGGACACTGTAAT +
Preference number: 5 (lower is better)
Translates to: RGREAGFMSWVCVPLKHKCGTGG*VFGHCN
Trigger: ATTACAGTGTCCAAAGACCAATCCTCCTGTACCACA...CTTGTGTTTTAAAGGGACACACACCCATGACATGAAGCCAGCTTCCCGTCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS GCA 90 bp CTTCTTTTTAATTTGGGCCAACACCAATCCGTTCATCCTTGCAGCTaGTTCTCAAAATCCAGAAGACCGGGCTGTGGTACAGGAGGATTG +
Preference number: 5 (lower is better)
Translates to: LLFNLGQHQSVHPCS*FSKSRRPGCGTGGL
Trigger: CAATCCTCCTGTACCACAGCCCGGTCTTCTGGATTTTGAGAAGCAGCTGCAAGGATGAACGGATTGGTGTTGGCCCAAATTAAAAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR CAA 90 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCGATCCAGGAGACTCCTaGCAACATGCAATTCCAGAA +
Preference number: 5 (lower is better)
Translates to: LKWAQSDQESISCREMLFDPGDS*QHAIPE
Trigger: TTCTGGAATTGCATGTTGCAAGGAGTCTCCTGGATC...GAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp TCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATAGGCGGTTGGGTGCAGTaGGAGCTGTCGGAAGCATTT +
Preference number: 5 (lower is better)
Translates to: SPHFHQEIAPNLECVLKIGGWVQ*ELSEAF
Trigger: AAATGCTTCCGACAGCTCCAACTGCACCCAACCGCC...TATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp TGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCAAGTGTCGATGCGGAGCGTCACTaGCTCCGAGTCCGACTTGTC +
Preference number: 5 (lower is better)
Translates to: WICALVRWMLDKEVNPSVDAERH*LRVRLV
Trigger: GACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATC...GACACTTGGATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp CAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCACTGTTTCAGAGGGCTaGAAATCAGGGAAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: QGNAVPYHSELVGCETPSTVSEG*KSGKKD
Trigger: GTCTTTCTTCCCTGATTTCAAGCCCTCTGAAACAGT...GGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp AACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGACTGTTTCAGAGGGCTaGAAATCAGGGAAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: NCHRRMCSPVVLKPCSMVTVSEG*KSGKKD
Trigger: GTCTTTCTTCCCTGATTTCAAGCCCTCTGAAACAGT...CACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR CAA 90 bp AATGAGGAGCAGCATCCATTCAAAGTGCAGTCAAAGGTAAACCTCACTGCCAAGCAGGAGGATTGGTCTTaGGACACTGTAATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: NEEQHPFKVQSKVNLTAKQEDWS*DTVILA
Trigger: TGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTG...CTTGGCAGTGAGGTTTACCTTTGACTGCACTTTGAATGGATGCTGCTCCTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp CAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCTGTGGTACAGGAGGATaGGTCTTTGGACACTGTAAT +
Preference number: 5 (lower is better)
Translates to: QGNAVPYHSELVGCETPSCGTGG*VFGHCN
Trigger: ATTACAGTGTCCAAAGACCAATCCTCCTGTACCACA...GGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp CACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATATTCATGTGTCAAGGCTGGGGGTaGAGGGCCCTACACAGCAGC +
Preference number: 5 (lower is better)
Translates to: HFHQEIAPNLECVLKIFMCQGWG*RALHSS
Trigger: GCTGCTGTGTAGGGCCCTCAACCCCCAGCCTTGACA...CATGAATATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp GGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCAGTGGCTGTCAGTAGGTaGAGCCTGAAAATAAAATCC +
Preference number: 5 (lower is better)
Translates to: GHRVTKKALAAGKCCSVSVAVSR*SLKIKS
Trigger: GGATTTTATTTTCAGGCTCAACCTACTGACAGCCAC...TGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp TGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTTCCTCTATGTTCCCCAAGCTCTaGCAGAAAAGTAGGAATAGA +
Preference number: 5 (lower is better)
Translates to: WPSEKEVGWVPKIIPLSSMFPKL*QKSRNR
Trigger: TCTATTCCTACTTTTCTGCAAGAGCTTGGGGAACAT...AGAGGAAAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp CTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATACTCTTCTTTTTAATTaGGGCCAACACCAATCCGTT +
Preference number: 5 (lower is better)
Translates to: LPWAVRTTVVDGKLASCHTLLFN*GQHQSV
Trigger: AACGGATTGGTGTTGGCCCAAATTAAAAAGAAGAGT...ATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR CAA 90 bp CTTCCTTGGGCAGTAAGGACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATTGTGAGATGATGCTTTaGGTCTTCTTTCTCCAAACA +
Preference number: 5 (lower is better)
Translates to: LPWAVRTTVVDGKLASCHCEMML*VFFLQT
Trigger: TGTTTGGAGAAAGAAGACCAAAAGCATCATCTCACA...ATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTCCTTACTGCCCAAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR CAA 90 bp CACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACCGTGCTCCATGGTGTACTATGATCCAGGAGACTCCTaGCAACATGCAATTCCAGAA +
Preference number: 5 (lower is better)
Translates to: HRRMCSPVVLKPCSMVYYDPGDS*QHAIPE
Trigger: TTCTGGAATTGCATGTTGCAAGGAGTCTCCTGGATC...ATAGTACACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380586.5
ENST00000519096.5
CDS-3UTR CAA 90 bp AATAAAATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTGGCGGTTGGGTGCAGTaGGAGCTGTCGGAAGCATTT +
Preference number: 5 (lower is better)
Translates to: NKIPSLPSRNSSKLRVCAGGWVQ*ELSEAF
Trigger: AAATGCTTCCGACAGCTCCAACTGCACCCAACCGCC...AGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGATTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp TCCTTTTGTAGAGTAAGAATTCTTACTCCAAACCCAATGTGTCCATTTTTCCAAAAGTGCGTCTTGGTCTaGGCGCTGGCCATCCCGCTG +
Preference number: 5 (lower is better)
Translates to: SFCRVRILTPNPMCPFFQKCVLV*ALAIPL
Trigger: CAGCGGGATGGCCAGCGCCAAGACCAAGACGCACTT...TTGGAAAAATGGACACATTGGGTTTGGAGTAAGAATTCTTACTCTACAAAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS-3UTR CAA 90 bp ATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATTGTAGAAGGTCTCTCTaGATCCCACGGGGATGCGCA +
Preference number: 5 (lower is better)
Translates to: IPSLPSRNSSKLRVCAQNCRRSL*IPRGCA
Trigger: TGCGCATCCCCGTGGGATCAAGAGAGACCTTCTACA...ATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp GAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTCAGGAGGATTGGTCTTaGGACACTGTAATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: ESISCREMLFRIILNWLVQEDWS*DTVILA
Trigger: TGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTG...AACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp GTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTCAGGAGGATTGGTCTTaGGACACTGTAATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: VLTMKPTGPEGWDIQFSLQEDWS*DTVILA
Trigger: TGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTG...AAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp CTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTAGGAACAAGCGATGTCTGTGGTACAGGAGGATaGGTCTTTGGACACTGTAAT +
Preference number: 5 (lower is better)
Translates to: LLGQKVGISSFHLGTSDVCGTGG*VFGHCN
Trigger: ATTACAGTGTCCAAAGACCAATCCTCCTGTACCACA...GACATCGCTTGTTCCTAAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCTGTGGTACAGGAGGATaGGTCTTTGGACACTGTAAT +
Preference number: 5 (lower is better)
Translates to: LKWAQSDQESISCREMLFCGTGG*VFGHCN
Trigger: ATTACAGTGTCCAAAGACCAATCCTCCTGTACCACA...GAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp GGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCACTTAATGGTTGGAACTaGATGGTTCTTGTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: GHRVTKKALAAGKCCSVSLNGWN*MVLVKA
Trigger: AGCCTTGACAAGAACCATCAAGTTCCAACCATTAAG...TGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp ACTCCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCTTGATTGGTCCTGTCTaGTCCTCCAAGAAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: TPALDSSLVIHQYCLKLSLIGPV*SSKKSW
Trigger: CCAGCTCTTCTTGGAGGACAAGACAGGACCAATCAA...GCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp CCTGCGTTAGACAGTTCTTTGGTGATCCATCAGTATTGTCTGAAGCTAAGCATTCCATGGTGGTTTTCGTaGAAGTGGGCACAGAGTGAC +
Preference number: 5 (lower is better)
Translates to: PALDSSLVIHQYCLKLSIPWWFS*KWAQSD
Trigger: GTCACTCTGTGCCCACTTCAACGAAAACCACCATGG...AATGCTTAGCTTCAGACAATACTGATGGATCACCAAAGAACTGTCTAACGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp CAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGCCCTCACTCTCATCTTaGGGAAATGAGGAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: QESISCREMLFRIILNWLPSLSS*GNEEQH
Trigger: ATGCTGCTCCTCATTTCCCAAAGATGAGAGTGAGGG...CAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp ACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCAACTGAGAAGTGCGTCTaGGTCTTGGCGCTGGCCATC +
Preference number: 5 (lower is better)
Translates to: TCWICALVRWMLDKEVNPTEKCV*VLALAI
Trigger: GATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGT...TGGATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp TGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAAGTAAATCCAAGTGTCTTCTCCCGGGAGAACTaGAGGAGCCTCACTGAGAAG +
Preference number: 5 (lower is better)
Translates to: WICALVRWMLDKEVNPSVFSREN*RSLTEK
Trigger: CTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGAGAA...GACACTTGGATTTACTTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380582.7
ENST00000519229.5
ENST00000521711.5
CDS-3UTR CAA 90 bp TACCAGGTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTACTGTTTCAGAGGGCTaGAAATCAGGGAAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: YQVLTMKPTGPEGWDIQFTVSEG*KSGKKD
Trigger: GTCTTTCTTCCCTGATTTCAAGCCCTCTGAAACAGT...AAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGACCTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp AATAAAATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTTGTAGAAGGTCTCTCTaGATCCCACGGGGATGCGCA +
Preference number: 5 (lower is better)
Translates to: NKIPSLPSRNSSKLRVCACRRSL*IPRGCA
Trigger: TGCGCATCCCCGTGGGATCAAGAGAGACCTTCTACA...AGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGATTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp TTCCGTATCATTCTGAACTGGTTGGTTGTGAGACACCCTCCCTCTTCCCTGTGCGAACAGGTAAGTGATTaGTCAAGAAAGGCTTTTGTA +
Preference number: 5 (lower is better)
Translates to: FRIILNWLVVRHPPSSLCEQVSD*SRKAFV
Trigger: TACAAAAGCCTTTCTTGACAAATCACTTACCTGTTC...GCACAGGGAAGAGGGAGGGTGTCTCACAACCAACCAGTTCAGAATGATACGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp TTGAAGTGGGCACAGAGTGACCAAGAAAGCATTAGCTGCAGGGAAATGCTGTTCGCGTTAGACAGTTCTTaGGTGATCCATCAGTATTGT +
Preference number: 5 (lower is better)
Translates to: LKWAQSDQESISCREMLFALDSS*VIHQYC
Trigger: ACAATACTGATGGATCACCAAAGAACTGTCTAACGC...GAACAGCATTTCCCTGCAGCTAATGCTTTCTTGGTCACTCTGTGCCCACTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp AAGAGCTGGCCTTCCGAGAAGGAAGTGGGGTGGGTACCTAAGATTATTCCCCTTATAGATGAAGTTGAGTaGACTACTGGATCTTTTACC +
Preference number: 5 (lower is better)
Translates to: KSWPSEKEVGWVPKIIPLIDEVE*TTGSFT
Trigger: GGTAAAAGATCCAGTAGTCAACTCAACTTCATCTAT...AAGGGGAATAATCTTAGGTACCCACCCCACTTCCTTCTCGGAAGGCCAGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp GAAAGCATTAGCTGCAGGGAAATGCTGTTCCGTATCATTCTGAACTGGTTGGTTGTGGCTGTCAGTAGGTaGAGCCTGAAAATAAAATCC +
Preference number: 5 (lower is better)
Translates to: ESISCREMLFRIILNWLVVAVSR*SLKIKS
Trigger: GGATTTTATTTTCAGGCTCAACCTACTGACAGCCAC...AACCAACCAGTTCAGAATGATACGGAACAGCATTTCCCTGCAGCTAATGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp GTGAACAGCCTCTATCTTTGCAAGAAATTAACAGCCACACCAACCTCTTGCTCTCCTCAAGCTGAGAAATaGGATGTATCAGAAAGGGTG +
Preference number: 5 (lower is better)
Translates to: VNSLYLCKKLTATPTSCSPQAEK*DVSERV
Trigger: CACCCTTTCTGATACATCCAATTTCTCAGCTTGAGG...AGAGCAAGAGGTTGGTGTGGCTGTTAATTTCTTGCAAAGATAGAGGCTGTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp TCAGGACTTGCTCTAAAAATAATGTGTCTGGATCTCGGCCACCATCTTAATGCTACTGTTTCAGAGGGCTaGAAATCAGGGAAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: SGLALKIMCLDLGHHLNATVSEG*KSGKKD
Trigger: GTCTTTCTTCCCTGATTTCAAGCCCTCTGAAACAGT...AGCATTAAGATGGTGGCCGAGATCCAGACACATTATTTTTAGAGCAAGTCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp GTCTTAACCATGAAACCTACTGGGCCAGAAGGTTGGGATATCCAGTTTTCACTTGGGTATATGATGGGGTaGATGCAGCTGTTTAGATAT +
Preference number: 5 (lower is better)
Translates to: VLTMKPTGPEGWDIQFSLGYMMG*MQLFRY
Trigger: ATATCTAAACAGCTGCATCAACCCCATCATATACCC...AAGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTAGGTTTCATGGTTAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp TGGGAAGGTAAGATAACTGCCACAGAAGAATGTGTAGTCCAGTGGTGCTTAAACGGGTATATGATGGGGTaGATGCAGCTGTTTAGATAT +
Preference number: 5 (lower is better)
Translates to: WEGKITATEECVVQWCLNGYMMG*MQLFRY
Trigger: ATATCTAAACAGCTGCATCAACCCCATCATATACCC...GTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTTACCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS-3UTR CAA 90 bp TTTTCACTTAGGAACAAGCGATGTCACATAATACATAGCCATAGCTTCCAGCTGTACTGGGCCAGAAGGTaGGGATATCCAGTTTTCACT +
Preference number: 5 (lower is better)
Translates to: FSLRNKRCHIIHSHSFQLYWARR*GYPVFT
Trigger: AGTGAAAACTGGATATCCCAACCTTCTGGCCCAGTA...CAGCTGGAAGCTATGGCTATGTATTATGTGACATCGCTTGTTCCTAAGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp TTGTTTTCTCTTGGGAAAAGCCATACCACCCTGGTTGGTTCTTTCAACCCTCTCAGCCACACCAACCTCTaGCTCTTTAAAGATATTAGA +
Preference number: 5 (lower is better)
Translates to: LFSLGKSHTTLVGSFNPLSHTNL*LFKDIR
Trigger: TCTAATATCTTTAAAGAGCAAGAGGTTGGTGTGGCT...GAGAGGGTTGAAAGAACCAACCAGGGTGGTATGGCTTTTCCCAAGAGAAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS-3UTR CAA 90 bp GTAACAGTAACATGTTGGATTTGTGCCTTAGTCAGATGGATGCTTGATAAAGAACAGGAGGATTGGTCTTaGGACACTGTAATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: VTVTCWICALVRWMLDKEQEDWS*DTVILA
Trigger: TGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTG...TTCTTTATCAAGCATCCATCTGACTAAGGCACAAATCCAACATGTTACTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380582.7
ENST00000519229.5
CDS-3UTR CAA 90 bp CACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATATTCATGTTGATTGGTCCTGTCTaGTCCTCCAAGAAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: HFHQEIAPNLECVLKIFMLIGPV*SSKKSW
Trigger: CCAGCTCTTCTTGGAGGACAAGACAGGACCAATCAA...CATGAATATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS GCA 90 bp CAGCATTCTGAACCCTTTCTCCACGGTGGCATCATAAAATTCACATaGTTGATATGCTCTCTGCAATTCTTGGTGAAATATCTACAATCC +
Preference number: 5 (lower is better)
Translates to: QHSEPFLHGGIIKFT*LICSLQFLVKYLQS
Trigger: GGATTGTAGATATTTCACCAAGAATTGCAGAGAGCATATCAAGCATGTGAATTTTATGATGCCACCGTGGAGAAAGGGTTCAGAATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS-3UTR CAA 90 bp TCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATAGGGTATATGATGGGGTaGATGCAGCTGTTTAGATAT +
Preference number: 5 (lower is better)
Translates to: SPHFHQEIAPNLECVLKIGYMMG*MQLFRY
Trigger: ATATCTAAACAGCTGCATCAACCCCATCATATACCC...TATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp ATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATGGGTATATGATGGGGTaGATGCAGCTGTTTAGATAT +
Preference number: 5 (lower is better)
Translates to: IPSLPSRNSSKLRVCAQNGYMMG*MQLFRY
Trigger: ATATCTAAACAGCTGCATCAACCCCATCATATACCC...ATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp ATCCCCTCACTTCCATCAAGAAATAGCTCCAAACTTAGAGTGTGTGCTCAAAATCTTAATGGTTGGAACTaGATGGTTCTTGTCAAGGCT +
Preference number: 5 (lower is better)
Translates to: IPSLPSRNSSKLRVCAQNLNGWN*MVLVKA
Trigger: AGCCTTGACAAGAACCATCAAGTTCCAACCATTAAG...ATTTTGAGCACACACTCTAAGTTTGGAGCTATTTCTTGATGGAAGTGAGGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276393.8
ENST00000380573.4
CDS-3UTR CAA 90 bp TTTTCACTTAGGAACAAGCGATGTCACATAATACATAGCCATAGCTTCCAGCTGTGCTCTCTGCAATTCTaGGTGAAATATCTACAATCC +
Preference number: 5 (lower is better)
Translates to: FSLRNKRCHIIHSHSFQLCSLQF*VKYLQS
Trigger: GGATTGTAGATATTTCACCAAGAATTGCAGAGAGCA...CAGCTGGAAGCTATGGCTATGTATTATGTGACATCGCTTGTTCCTAAGTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS CCA 72 bp CGCGGGGCTGCCGGGGACCCTCTCCACCTGCCGGGCTaGCCTAGCCCGGGACCCGGACTCCCTCCCTACCCG +
Preference number: 6 (lower is better)
Translates to: RGAAGDPLHLPG*PSPGPGLPPYP
Trigger: CGGGTAGGGAGGGAGTCCGGGTCCCGGGCTAGGCCAGCCCGGCAGGTGGAGAGGGTCCCCGGCAGCCCCGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS CCA 72 bp GCCGCTGCTGAGCCACCAGCTCGCGCGCGGGGGATGTaGACCCGGCTTCGGTCCCGGGAGCTGCCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: AAAEPPARARGM*TRLRSRELPAC
Trigger: GCAGGCAGGCAGCTCCCGGGACCGAAGCCGGGTCCACATCCCCCGCGCGCGAGCTGGTGGCTCAGCAGCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS GCA 72 bp CGCGGGGGATGTGGACCCGGCTTCGGTCCCGGGAGCTaGCTGCCTGCTCTTCTCTGGAGGCGGAGAGGGGAC +
Preference number: 6 (lower is better)
Translates to: RGGCGPGFGPGS*LPALLWRRRGD
Trigger: GTCCCCTCTCCGCCTCCAGAGAAGAGCAGGCAGGCAGCTCCCGGGACCGAAGCCGGGTCCACATCCCCCGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS GCA 72 bp GGGGATGTGGACCCGGCTTCGGTCCCGGGAGCTGCCTaGCTGCTCTTCTCTGGAGGCGGAGAGGGGACCGTG +
Preference number: 6 (lower is better)
Translates to: GDVDPASVPGAA*LLFSGGGEGTV
Trigger: CACGGTCCCCTCTCCGCCTCCAGAGAAGAGCAGGCAGGCAGCTCCCGGGACCGAAGCCGGGTCCACATCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS CCA 72 bp GCGCGCGCGCGGGTGGGAAACAACCCTGGCCAGCCCTaGGAACCCTCAGAAGGCCACATGAAGGGGCAGGGC +
Preference number: 6 (lower is better)
Translates to: ARARVGNNPGQP*EPSEGHMKGQG
Trigger: GCCCTGCCCCTTCATGTGGCCTTCTGAGGGTTCCCAGGGCTGGCCAGGGTTGTTTCCCACCCGCGCGCGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS CCA 72 bp AAGGTCTCGGCTGGAGGGAGCCCTGCCAGGTGGGTTTaGCTGGGGGTGAGAGCGCGCGCGCGGGTGGGAAAC +
Preference number: 6 (lower is better)
Translates to: KVSAGGSPARWV*LGVRARARVGN
Trigger: GTTTCCCACCCGCGCGCGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGGGCTCCCTCCAGCCGAGACCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS CAA 90 bp CGGGAATCAAAAGGTCTCGGCTGGAGGGAGCCCTGCCAGGTGGGTTaGGCTGGGGGTGAGAGCGCGCGCGCGGGTGGGAAACAACCCTGG +
Preference number: 6 (lower is better)
Translates to: RESKGLGWREPCQVG*AGGESARAGGKQPW
Trigger: CCAGGGTTGTTTCCCACCCGCGCGCGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGGGCTCCCTCCAGCCGAGACCTTTTGATTCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS GCA 72 bp AGCCGGGAATCAAAAGGTCTCGGCTGGAGGGAGCCCTaGCAGGTGGGTTTGGCTGGGGGTGAGAGCGCGCGC +
Preference number: 6 (lower is better)
Translates to: SRESKGLGWREP*QVGLAGGESAR
Trigger: GCGCGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGGGCTCCCTCCAGCCGAGACCTTTTGATTCCCGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS CCA 72 bp GGGGGTGAGAGCGCGCGCGCGGGTGGGAAACAACCCTaGCCAGCCCTGGGAACCCTCAGAAGGCCACATGAA +
Preference number: 6 (lower is better)
Translates to: GGESARAGGKQP*PALGTLRRPHE
Trigger: TTCATGTGGCCTTCTGAGGGTTCCCAGGGCTGGCCAGGGTTGTTTCCCACCCGCGCGCGCGCTCTCACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS TCA 72 bp CCAGCGCTGAGAAGAGCACGTAGCCCGGCTCCTCGTTaGTCTGGCAGATGGTCTCGTCCTCGGGGGCCGGCT +
Preference number: 6 (lower is better)
Translates to: PALRRARSPAPR*SGRWSRPRGPA
Trigger: AGCCGGCCCCCGAGGACGAGACCATCTGCCAGATCAACGAGGAGCCGGGCTACGTGCTCTTCTCAGCGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS GCA 72 bp CGTCTTGGTCTTGGCGCTGGCCATCCCGCTGCCTCCTaGCGGGGCGTTTTTCCGATGGATGCGGAGCGTCAC +
Preference number: 6 (lower is better)
Translates to: RLGLGAGHPAAS*RGVFPMDAERH
Trigger: GTGACGCTCCGCATCCATCGGAAAAACGCCCCGGCAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS GCA 72 bp CTTGATCCCACGGGGATGCGCACCATGTCCTTGTGTTaGCCTTCCACGGCCTGGCTGGGCGGGTGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: LDPTGMRTMSLC*PSTAWLGGCRV
Trigger: CACCCTGCACCCGCCCAGCCAGGCCGTGGAAGGGCAACACAAGGACATGGTGCGCATCCCCGTGGGATCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000518621.1
ENST00000519229.5
CDS CCA 72 bp TGGAGCTGTCGGAAGCATTTCCCGAGAGAAACACCATaGTCCCAGCCGGGGCCGGGCGAGGTCCGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: WSCRKHFPRETP*SQPGPGEVRLS
Trigger: GGACAGCCGGACCTCGCCCGGCCCCGGCTGGGACCATGGTGTTTCTCTCGGGAAATGCTTCCGACAGCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS GCA 72 bp TCCCGCTGCCTCCTGCCGGGGCGTTTTTCCGATGGATaGGGAGCGTCACTTGCTCCGAGTCCGACTTGTCGG +
Preference number: 6 (lower is better)
Translates to: SRCLLPGRFSDG*GASLAPSPTCR
Trigger: CCGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATCCATCGGAAAAACGCCCCGGCAGGAGGCAGCGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CCA 72 bp GGAGCCTCACTGAGAAGTGCGTCTTGGTCTTGGCGCTaGCCATCCCGCTGCCTCCTGCCGGGGCGTTTTTCC +
Preference number: 6 (lower is better)
Translates to: GASLRSASWSWR*PSRCLLPGRFS
Trigger: GGAAAAACGCCCCGGCAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CCA 72 bp GCACCATGTCCTTGTGTTGCCCTTCCACGGCCTGGCTaGGCGGGTGCAGGGTGTAGCCCAGGGCATGTTTGG +
Preference number: 6 (lower is better)
Translates to: APCPCVALPRPG*AGAGCSPGHVW
Trigger: CCAAACATGCCCTGGGCTACACCCTGCACCCGCCCAGCCAGGCCGTGGAAGGGCAACACAAGGACATGGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000518621.1
ENST00000519229.5
CDS CAA 72 bp GTCTCTCTTGATCCCACGGGGATGCGCACCATGTCCTaGTGTTGCCCTTCCACGGCCTGGCTGGGCGGGTGC +
Preference number: 6 (lower is better)
Translates to: VSLDPTGMRTMS*CCPSTAWLGGC
Trigger: GCACCCGCCCAGCCAGGCCGTGGAAGGGCAACACAAGGACATGGTGCGCATCCCCGTGGGATCAAGAGAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000518621.1
ENST00000519229.5
CDS CAA 72 bp GATCAGCCGTCGACGCTCAAAGGCAGGGACCGATGGTaGGGTAGCGCAGCGCTACAGGTTGGGCGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: DQPSTLKGRDRW*GSAALQVGRCS
Trigger: GGAGCAGCGCCCAACCTGTAGCGCTGCGCTACCCAACCATCGGTCCCTGCCTTTGAGCGTCGACGGCTGATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS CAA 90 bp CGATGGATGCGGAGCGTCACTTGCTCCGAGTCCGACTTGTCGGTCTaGAGGCCAGACTTGAGGCCCCGGCTCTCCCTCTTGGCCACCACG +
Preference number: 6 (lower is better)
Translates to: RWMRSVTCSESDLSV*RPDLRPRLSLLATT
Trigger: CGTGGTGGCCAAGAGGGAGAGCCGGGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATCCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS TCA 72 bp ACCCTGGCCAGCCCTGGGAACCCTCAGAAGGCCACATaGAGGGGCAGGGCATTAAAGACATGGCCAGGGGCG +
Preference number: 6 (lower is better)
Translates to: TLASPGNPQKAT*RGRALKTWPGA
Trigger: CGCCCCTGGCCATGTCTTTAATGCCCTGCCCCTTCATGTGGCCTTCTGAGGGTTCCCAGGGCTGGCCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS GCA 72 bp AGAAGTGCGTCTTGGTCTTGGCGCTGGCCATCCCGCTaGCTCCTGCCGGGGCGTTTTTCCGATGGATGCGGA +
Preference number: 6 (lower is better)
Translates to: RSASWSWRWPSR*LLPGRFSDGCG
Trigger: TCCGCATCCATCGGAAAAACGCCCCGGCAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGACGCACTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CCA 72 bp CTAGCCCGGGACCCGGACTCCCTCCCTACCCGAAGCTaGGTGCGAAGATCCAGGAGACTCCTTGCAACATGC +
Preference number: 6 (lower is better)
Translates to: LARDPDSLPTRS*VRRSRRLLATC
Trigger: GCATGTTGCAAGGAGTCTCCTGGATCTTCGCACCCAGCTTCGGGTAGGGAGGGAGTCCGGGTCCCGGGCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS CCA 72 bp ATCAGCCGTCGACGCTCAAAGGCAGGGACCGATGGTTaGGTAGCGCAGCGCTACAGGTTGGGCGCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: ISRRRSKAGTDG*VAQRYRLGAAP
Trigger: AGGAGCAGCGCCCAACCTGTAGCGCTGCGCTACCCAACCATCGGTCCCTGCCTTTGAGCGTCGACGGCTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS CAA 72 bp CGGAGCGTCACTTGCTCCGAGTCCGACTTGTCGGTCTaGAGGCCAGACTTGAGGCCCCGGCTCTCCCTCTTG +
Preference number: 6 (lower is better)
Translates to: RSVTCSESDLSV*RPDLRPRLSLL
Trigger: CAAGAGGGAGAGCCGGGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCAAGTGACGCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CAA 72 bp CGATGGATGCGGAGCGTCACTTGCTCCGAGTCCGACTaGTCGGTCTTGAGGCCAGACTTGAGGCCCCGGCTC +
Preference number: 6 (lower is better)
Translates to: RWMRSVTCSESD*SVLRPDLRPRL
Trigger: GAGCCGGGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATCCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CAA 72 bp CGGGAGAACTTGAGGAGCCTCACTGAGAAGTGCGTCTaGGTCTTGGCGCTGGCCATCCCGCTGCCTCCTGCC +
Preference number: 6 (lower is better)
Translates to: RENLRSLTEKCV*VLALAIPLPPA
Trigger: GGCAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGCTCCTCAAGTTCTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CAA 90 bp GCTGCCTCCTGCCGGGGCGTTTTTCCGATGGATGCGGAGCGTCACTaGCTCCGAGTCCGACTTGTCGGTCTTGAGGCCAGACTTGAGGCC +
Preference number: 6 (lower is better)
Translates to: AASCRGVFPMDAERH*LRVRLVGLEARLEA
Trigger: GGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATCCATCGGAAAAACGCCCCGGCAGGAGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CAA 90 bp TCCCGGGAGAACTTGAGGAGCCTCACTGAGAAGTGCGTCTTGGTCTaGGCGCTGGCCATCCCGCTGCCTCCTGCCGGGGCGTTTTTCCGA +
Preference number: 6 (lower is better)
Translates to: SRENLRSLTEKCVLV*ALAIPLPPAGAFFR
Trigger: TCGGAAAAACGCCCCGGCAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGCTCCTCAAGTTCTCCCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CAA 90 bp AAACCAAAAGATCAGCCGTCGACGCTCAAAGGCAGGGACCGATGGTaGGGTAGCGCAGCGCTACAGGTTGGGCGCTGCTCCTGGCCCGCA +
Preference number: 6 (lower is better)
Translates to: KPKDQPSTLKGRDRW*GSAALQVGRCSWPA
Trigger: TGCGGGCCAGGAGCAGCGCCCAACCTGTAGCGCTGCGCTACCCAACCATCGGTCCCTGCCTTTGAGCGTCGACGGCTGATCTTTTGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS TCA 72 bp TTGGGCGCTGCTCCTGGCCCGCAGTTACCTACATTTTaGGCTGCCCCACCGAAGGCTCCTGCTCTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: LGAAPGPQLPTF*AAPPKAPALSS
Trigger: GCTGGAGAGAGCAGGAGCCTTCGGTGGGGCAGCTCAAAATGTAGGTAACTGCGGGCCAGGAGCAGCGCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS GCA 72 bp CACCCCGAGCAGAATGGCCTTGGAAATGTTCACCGGTaGCGGCGGTTGGGTGCAGTTGGAGCTGTCGGAAGC +
Preference number: 6 (lower is better)
Translates to: HPEQNGLGNVHR*RRLGAVGAVGS
Trigger: GCTTCCGACAGCTCCAACTGCACCCAACCGCCGGCACCGGTGAACATTTCCAAGGCCATTCTGCTCGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS GCA 72 bp TTGATCTGGCAGATGGTCTCGTCCTCGGGGGCCGGCTaGCTCCAGCCGAACAGGGGTCCAATGGATATGACC +
Preference number: 6 (lower is better)
Translates to: LIWQMVSSSGAG*LQPNRGPMDMT
Trigger: GGTCATATCCATTGGACCCCTGTTCGGCTGGAGGCAGCCGGCCCCCGAGGACGAGACCATCTGCCAGATCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS GCA 72 bp GCCGGGGCGTTTTTCCGATGGATGCGGAGCGTCACTTaGTCCGAGTCCGACTTGTCGGTCTTGAGGCCAGAC +
Preference number: 6 (lower is better)
Translates to: AGAFFRWMRSVT*SESDLSVLRPD
Trigger: GTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATCCATCGGAAAAACGCCCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CCA 72 bp TTGGGTAGCGCAGCGCTACAGGTTGGGCGCTGCTCCTaGCCCGCAGTTACCTACATTTTGAGCTGCCCCACC +
Preference number: 6 (lower is better)
Translates to: LGSAALQVGRCS*PAVTYILSCPT
Trigger: GGTGGGGCAGCTCAAAATGTAGGTAACTGCGGGCCAGGAGCAGCGCCCAACCTGTAGCGCTGCGCTACCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS CCA 72 bp AAAGATCAGCCGTCGACGCTCAAAGGCAGGGACCGATaGTTGGGTAGCGCAGCGCTACAGGTTGGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: KDQPSTLKGRDR*LGSAALQVGRC
Trigger: GCAGCGCCCAACCTGTAGCGCTGCGCTACCCAACCATCGGTCCCTGCCTTTGAGCGTCGACGGCTGATCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS CAA 72 bp GTTGGGCGCTGCTCCTGGCCCGCAGTTACCTACATTTaGAGCTGCCCCACCGAAGGCTCCTGCTCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: VGRCSWPAVTYI*SCPTEGSCSLQ
Trigger: CTGGAGAGAGCAGGAGCCTTCGGTGGGGCAGCTCAAAATGTAGGTAACTGCGGGCCAGGAGCAGCGCCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS CAA 72 bp GCAGGGACCGATGGTTGGGTAGCGCAGCGCTACAGGTaGGGCGCTGCTCCTGGCCCGCAGTTACCTACATTT +
Preference number: 6 (lower is better)
Translates to: AGTDGWVAQRYR*GAAPGPQLPTF
Trigger: AAATGTAGGTAACTGCGGGCCAGGAGCAGCGCCCAACCTGTAGCGCTGCGCTACCCAACCATCGGTCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS CAA 90 bp GCGTTTTTCCGATGGATGCGGAGCGTCACTTGCTCCGAGTCCGACTaGTCGGTCTTGAGGCCAGACTTGAGGCCCCGGCTCTCCCTCTTG +
Preference number: 6 (lower is better)
Translates to: AFFRWMRSVTCSESD*SVLRPDLRPRLSLL
Trigger: CAAGAGGGAGAGCCGGGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATCCATCGGAAAAACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CAA 90 bp GCGCTACAGGTTGGGCGCTGCTCCTGGCCCGCAGTTACCTACATTTaGAGCTGCCCCACCGAAGGCTCCTGCTCTCTCCAGCTTCTAGGA +
Preference number: 6 (lower is better)
Translates to: ALQVGRCSWPAVTYI*SCPTEGSCSLQLLG
Trigger: TCCTAGAAGCTGGAGAGAGCAGGAGCCTTCGGTGGGGCAGCTCAAAATGTAGGTAACTGCGGGCCAGGAGCAGCGCCCAACCTGTAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS GCA 72 bp GCACATCCACTGCCGCCCAGATGTTGCAGAAGACCCTaGCGAAGGCCCAGTAGCCTAGGACCTCGAAGATGG +
Preference number: 6 (lower is better)
Translates to: AHPLPPRCCRRP*RRPSSLGPRRW
Trigger: CCATCTTCGAGGTCCTAGGCTACTGGGCCTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAGTGGATGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS GCA 72 bp CGATGGTTGGGTAGCGCAGCGCTACAGGTTGGGCGCTaGTCCTGGCCCGCAGTTACCTACATTTTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: RWLGSAALQVGR*SWPAVTYILSC
Trigger: GCAGCTCAAAATGTAGGTAACTGCGGGCCAGGAGCAGCGCCCAACCTGTAGCGCTGCGCTACCCAACCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS CAA 72 bp TGCCGGGGCGTTTTTCCGATGGATGCGGAGCGTCACTaGCTCCGAGTCCGACTTGTCGGTCTTGAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: CRGVFPMDAERH*LRVRLVGLEAR
Trigger: TCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATCCATCGGAAAAACGCCCCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS GCA 72 bp CGCTGCTCCTGGCCCGCAGTTACCTACATTTTGAGCTaGCCCACCGAAGGCTCCTGCTCTCTCCAGCTTCTA +
Preference number: 6 (lower is better)
Translates to: RCSWPAVTYILS*PTEGSCSLQLL
Trigger: TAGAAGCTGGAGAGAGCAGGAGCCTTCGGTGGGGCAGCTCAAAATGTAGGTAACTGCGGGCCAGGAGCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS CAA 72 bp GGGACCGTGTCTCCGAGGCACCAAATCCTTGTCCTTTaGCACCCGCTGACTCACCCCTCCACCACTGATGTC +
Preference number: 6 (lower is better)
Translates to: GTVSPRHQILVL*HPLTHPSTTDV
Trigger: GACATCAGTGGTGGAGGGGTGAGTCAGCGGGTGCAAAAGGACAAGGATTTGGTGCCTCGGAGACACGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS CAA 90 bp CACCCCGAGCAGAATGGCCTTGGAAATGTTCACCGGTGCCGGCGGTaGGGTGCAGTTGGAGCTGTCGGAAGCATTTCCCGAGAGAAACAC +
Preference number: 6 (lower is better)
Translates to: HPEQNGLGNVHRCRR*GAVGAVGSISREKH
Trigger: GTGTTTCTCTCGGGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCGGCACCGGTGAACATTTCCAAGGCCATTCTGCTCGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CAA 90 bp GGCGGAGAGGGGACCGTGTCTCCGAGGCACCAAATCCTTGTCCTTTaGCACCCGCTGACTCACCCCTCCACCACTGATGTCTTTAAGCTC +
Preference number: 6 (lower is better)
Translates to: GGEGTVSPRHQILVL*HPLTHPSTTDVFKL
Trigger: GAGCTTAAAGACATCAGTGGTGGAGGGGTGAGTCAGCGGGTGCAAAAGGACAAGGATTTGGTGCCTCGGAGACACGGTCCCCTCTCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS CAA 90 bp CCTGGTGACAGAGCGAGACTTCGTCCGGGCTGTGGTACAGGAGGATaGGTCTTTGGACACTGTAATCCTGGCAGATCCACGGGGCATGGA +
Preference number: 6 (lower is better)
Translates to: PGDRARLRPGCGTGG*VFGHCNPGRSTGHG
Trigger: TCCATGCCCCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGACGAAGTCTCGCTCTGTCACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS GCA 72 bp TGGCCTTGGAAATGTTCACCGGTGCCGGCGGTTGGGTaGAGTTGGAGCTGTCGGAAGCATTTCCCGAGAGAA +
Preference number: 6 (lower is better)
Translates to: WPWKCSPVPAVG*SWSCRKHFPRE
Trigger: TTCTCTCGGGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCGGCACCGGTGAACATTTCCAAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CCA 72 bp AGAATGGCCTTGGAAATGTTCACCGGTGCCGGCGGTTaGGTGCAGTTGGAGCTGTCGGAAGCATTTCCCGAG +
Preference number: 6 (lower is better)
Translates to: RMALEMFTGAGG*VQLELSEAFPE
Trigger: CTCGGGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCGGCACCGGTGAACATTTCCAAGGCCATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CCA 72 bp GGCTGGGCGGGTGCAGGGTGTAGCCCAGGGCATGTTTaGAAGACTGCTTTCTGCAGAGACACTGGATTCTCA +
Preference number: 6 (lower is better)
Translates to: GWAGAGCSPGHV*KTAFCRDTGFS
Trigger: TGAGAATCCAGTGTCTCTGCAGAAAGCAGTCTTCCAAACATGCCCTGGGCTACACCCTGCACCCGCCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000518621.1
ENST00000519229.5
CDS CCA 72 bp GACAACAGTCGTGGACGGGAAGCTGGCTTCATGTCATaGGTGTGTGTCCCCGGGCTGTGGTACAGGAGGATT +
Preference number: 6 (lower is better)
Translates to: DNSRGREAGFMS*VCVPGLWYRRI
Trigger: AATCCTCCTGTACCACAGCCCGGGGACACACACCCATGACATGAAGCCAGCTTCCCGTCCACGACTGTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380582.7
CDS CAA 72 bp CAGAATGGCCTTGGAAATGTTCACCGGTGCCGGCGGTaGGGTGCAGTTGGAGCTGTCGGAAGCATTTCCCGA +
Preference number: 6 (lower is better)
Translates to: QNGLGNVHRCRR*GAVGAVGSISR
Trigger: TCGGGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCGGCACCGGTGAACATTTCCAAGGCCATTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CAA 72 bp GTGTGTCCCCGGGCTGTGGTACAGGAGGATTGGTCTTaGGACACTGTAATCCTGGCAGATCCACGGGGCATG +
Preference number: 6 (lower is better)
Translates to: VCPRAVVQEDWS*DTVILADPRGM
Trigger: CATGCCCCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGGGACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380582.7
CDS CAA 90 bp AGAATGGCCTTGGAAATGTTCACCGGTGCCGGCGGTTGGGTGCAGTaGGAGCTGTCGGAAGCATTTCCCGAGAGAAACACCATGGTCCCA +
Preference number: 6 (lower is better)
Translates to: RMALEMFTGAGGWVQ*ELSEAFPERNTMVP
Trigger: TGGGACCATGGTGTTTCTCTCGGGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCGGCACCGGTGAACATTTCCAAGGCCATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS GCA 72 bp AGATCCTGTAGAAGGTCTCTCTTGATCCCACGGGGATaGGCACCATGTCCTTGTGTTGCCCTTCCACGGCCT +
Preference number: 6 (lower is better)
Translates to: RSCRRSLLIPRG*APCPCVALPRP
Trigger: AGGCCGTGGAAGGGCAACACAAGGACATGGTGCGCATCCCCGTGGGATCAAGAGAGACCTTCTACAGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000518621.1
ENST00000519229.5
CDS CCA 72 bp TGGAAATGTTCACCGGTGCCGGCGGTTGGGTGCAGTTaGAGCTGTCGGAAGCATTTCCCGAGAGAAACACCA +
Preference number: 6 (lower is better)
Translates to: WKCSPVPAVGCS*SCRKHFPRETP
Trigger: TGGTGTTTCTCTCGGGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCGGCACCGGTGAACATTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CCA 72 bp GAGCGAGACTTCGTCCGGGCTGTGGTACAGGAGGATTaGTCTTTGGACACTGTAATCCTGGCAGATCCACGG +
Preference number: 6 (lower is better)
Translates to: ERDFVRAVVQED*SLDTVILADPR
Trigger: CCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGACGAAGTCTCGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS CCA 72 bp ATGGGTGTGTGTCCCCGGGCTGTGGTACAGGAGGATTaGTCTTTGGACACTGTAATCCTGGCAGATCCACGG +
Preference number: 6 (lower is better)
Translates to: MGVCPRAVVQED*SLDTVILADPR
Trigger: CCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGGGACACACACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380582.7
CDS CAA 72 bp TTGGAAATGTTCACCGGTGCCGGCGGTTGGGTGCAGTaGGAGCTGTCGGAAGCATTTCCCGAGAGAAACACC +
Preference number: 6 (lower is better)
Translates to: LEMFTGAGGWVQ*ELSEAFPERNT
Trigger: GGTGTTTCTCTCGGGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCGGCACCGGTGAACATTTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000519229.5
ENST00000521711.5
CDS CAA 72 bp CTTCTCACCCGGGCTGTGGTACAGGAGGATTGGTCTTaGGACACTGTAATCCTGGCAGATCCACGGGGCATG +
Preference number: 6 (lower is better)
Translates to: LLTRAVVQEDWS*DTVILADPRGM
Trigger: CATGCCCCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGGTGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276393.8
ENST00000380573.4
ENST00000518621.1
CDS CAA 72 bp ATTCCCCTCCGGGCTGTGGTACAGGAGGATTGGTCTTaGGACACTGTAATCCTGGCAGATCCACGGGGCATG +
Preference number: 6 (lower is better)
Translates to: IPLRAVVQEDWS*DTVILADPRGM
Trigger: CATGCCCCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGAGGGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS CAA 72 bp GACTTCGTCCGGGCTGTGGTACAGGAGGATTGGTCTTaGGACACTGTAATCCTGGCAGATCCACGGGGCATG +
Preference number: 6 (lower is better)
Translates to: DFVRAVVQEDWS*DTVILADPRGM
Trigger: CATGCCCCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGACGAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS CAA 72 bp CATGGGTGTGTGTCCCCGGGCTGTGGTACAGGAGGATaGGTCTTTGGACACTGTAATCCTGGCAGATCCACG +
Preference number: 6 (lower is better)
Translates to: HGCVSPGCGTGG*VFGHCNPGRST
Trigger: CGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGGGACACACACCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380582.7
CDS CAA 72 bp CCAGAAGACCGGGCTGTGGTACAGGAGGATTGGTCTTaGGACACTGTAATCCTGGCAGATCCACGGGGCATG +
Preference number: 6 (lower is better)
Translates to: PEDRAVVQEDWS*DTVILADPRGM
Trigger: CATGCCCCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGTCTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS CAA 90 bp GTCATGGGTGTGTGTCCCCGGGCTGTGGTACAGGAGGATTGGTCTTaGGACACTGTAATCCTGGCAGATCCACGGGGCATGGAAGAGAAA +
Preference number: 6 (lower is better)
Translates to: VMGVCPRAVVQEDWS*DTVILADPRGMEEK
Trigger: TTTCTCTTCCATGCCCCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGGGACACACACCCATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380582.7
CDS TCA 72 bp GCCATCCGTCTTGGAGATCCTGTAGAAGGTCTCTCTTaGTCCCACGGGGATGCGCACCATGTCCTTGTGTTG +
Preference number: 6 (lower is better)
Translates to: AIRLGDPVEGLS*SHGDAHHVLVL
Trigger: CAACACAAGGACATGGTGCGCATCCCCGTGGGATCAAGAGAGACCTTCTACAGGATCTCCAAGACGGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000518621.1
ENST00000519229.5
CDS TCA 72 bp CTCCGAGGCACCAAATCCTTGTCCTTTTGCACCCGCTaGCTCACCCCTCCACCACTGATGTCTTTAAGCTCC +
Preference number: 6 (lower is better)
Translates to: LRGTKSLSFCTR*LTPPPLMSLSS
Trigger: GGAGCTTAAAGACATCAGTGGTGGAGGGGTGAGTCAGCGGGTGCAAAAGGACAAGGATTTGGTGCCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380573.4
CDS CCA 72 bp CAATCCATTCCCCTCCGGGCTGTGGTACAGGAGGATTaGTCTTTGGACACTGTAATCCTGGCAGATCCACGG +
Preference number: 6 (lower is better)
Translates to: QSIPLRAVVQED*SLDTVILADPR
Trigger: CCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGAGGGGAATGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS CAA 72 bp CGCCATCCGTCTTGGAGATCCTGTAGAAGGTCTCTCTaGATCCCACGGGGATGCGCACCATGTCCTTGTGTT +
Preference number: 6 (lower is better)
Translates to: RHPSWRSCRRSL*IPRGCAPCPCV
Trigger: AACACAAGGACATGGTGCGCATCCCCGTGGGATCAAGAGAGACCTTCTACAGGATCTCCAAGACGGATGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000518621.1
ENST00000519229.5
CDS CAA 72 bp AGAGCGAGACTTCGTCCGGGCTGTGGTACAGGAGGATaGGTCTTTGGACACTGTAATCCTGGCAGATCCACG +
Preference number: 6 (lower is better)
Translates to: RARLRPGCGTGG*VFGHCNPGRST
Trigger: CGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGACGAAGTCTCGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS CAA 90 bp ACAGAGCGAGACTTCGTCCGGGCTGTGGTACAGGAGGATTGGTCTTaGGACACTGTAATCCTGGCAGATCCACGGGGCATGGAAGAGAAA +
Preference number: 6 (lower is better)
Translates to: TERDFVRAVVQEDWS*DTVILADPRGMEEK
Trigger: TTTCTCTTCCATGCCCCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGACGAAGTCTCGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380586.5
CDS CAA 72 bp ACAATCCATTCCCCTCCGGGCTGTGGTACAGGAGGATaGGTCTTTGGACACTGTAATCCTGGCAGATCCACG +
Preference number: 6 (lower is better)
Translates to: TIHSPPGCGTGG*VFGHCNPGRST
Trigger: CGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGAGGGGAATGGATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS CAA 90 bp ACTCCCTCCCTACCCGAAGCTGGGTGCGAAGATCCAGGAGACTCCTaGCAACATGCAATTCCAGAATTACGAGAATCTGCTTTTCCGCGC +
Preference number: 6 (lower is better)
Translates to: TPSLPEAGCEDPGDS*QHAIPELRESAFPR
Trigger: GCGCGGAAAAGCAGATTCTCGTAATTCTGGAATTGCATGTTGCAAGGAGTCTCCTGGATCTTCGCACCCAGCTTCGGGTAGGGAGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS CAA 90 bp ATTCACAAACGCCATCCGTCTTGGAGATCCTGTAGAAGGTCTCTCTaGATCCCACGGGGATGCGCACCATGTCCTTGTGTTGCCCTTCCA +
Preference number: 6 (lower is better)
Translates to: IHKRHPSWRSCRRSL*IPRGCAPCPCVALP
Trigger: TGGAAGGGCAACACAAGGACATGGTGCGCATCCCCGTGGGATCAAGAGAGACCTTCTACAGGATCTCCAAGACGGATGGCGTTTGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000518621.1
ENST00000519229.5
CDS CAA 90 bp CTACAATCCATTCCCCTCCGGGCTGTGGTACAGGAGGATTGGTCTTaGGACACTGTAATCCTGGCAGATCCACGGGGCATGGAAGAGAAA +
Preference number: 6 (lower is better)
Translates to: LQSIPLRAVVQEDWS*DTVILADPRGMEEK
Trigger: TTTCTCTTCCATGCCCCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGAGGGGAATGGATTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS CCA 72 bp CTTTTACTTCTCACCCGGGCTGTGGTACAGGAGGATTaGTCTTTGGACACTGTAATCCTGGCAGATCCACGG +
Preference number: 6 (lower is better)
Translates to: LLLLTRAVVQED*SLDTVILADPR
Trigger: CCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGGTGAGAAGTAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276393.8
ENST00000380573.4
ENST00000518621.1
CDS CCA 72 bp TCTGCTGTCCACTTGGCTTTGCTATTCCATAGAAGGTaGATGCCACTCTGGAAAGGAGGAGGAGTGTCCCCT +
Preference number: 6 (lower is better)
Translates to: SAVHLALLFHRR*MPLWKGGGVSP
Trigger: AGGGGACACTCCTCCTCCTTTCCAGAGTGGCATCCACCTTCTATGGAATAGCAAAGCCAAGTGGACAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518810.1
CDS CCA 72 bp CAAAATCCAGAAGACCGGGCTGTGGTACAGGAGGATTaGTCTTTGGACACTGTAATCCTGGCAGATCCACGG +
Preference number: 6 (lower is better)
Translates to: QNPEDRAVVQED*SLDTVILADPR
Trigger: CCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGTCTTCTGGATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS CAA 72 bp GCTTTTACTTCTCACCCGGGCTGTGGTACAGGAGGATaGGTCTTTGGACACTGTAATCCTGGCAGATCCACG +
Preference number: 6 (lower is better)
Translates to: AFTSHPGCGTGG*VFGHCNPGRST
Trigger: CGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGGTGAGAAGTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276393.8
ENST00000380573.4
ENST00000518621.1
CDS CAA 90 bp GAAATATCTACAATCCATTCCCCTCCGGGCTGTGGTACAGGAGGATaGGTCTTTGGACACTGTAATCCTGGCAGATCCACGGGGCATGGA +
Preference number: 6 (lower is better)
Translates to: EISTIHSPPGCGTGG*VFGHCNPGRSTGHG
Trigger: TCCATGCCCCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGAGGGGAATGGATTGTAGATATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS CAA 90 bp CTCTCTCTCTCTCTGCCTCTCTCTCTCTCTGCTGTCCACTTGGCTTaGCTATTCCATAGAAGGTGGATGCCACTCTGGAAAGGAGGAGGA +
Preference number: 6 (lower is better)
Translates to: LSLSLPLSLSAVHLA*LFHRRWMPLWKGGG
Trigger: TCCTCCTCCTTTCCAGAGTGGCATCCACCTTCTATGGAATAGCAAAGCCAAGTGGACAGCAGAGAGAGAGAGAGGCAGAGAGAGAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518810.1
CDS CAA 90 bp CTGCCTCTCTCTCTCTCTCTGCCTCTCTCTCTCTCTGCTGTCCACTaGGCTTTGCTATTCCATAGAAGGTGGATGCCACTCTGGAAAGGA +
Preference number: 6 (lower is better)
Translates to: LPLSLSLPLSLSAVH*ALLFHRRWMPLWKG
Trigger: TCCTTTCCAGAGTGGCATCCACCTTCTATGGAATAGCAAAGCCAAGTGGACAGCAGAGAGAGAGAGAGGCAGAGAGAGAGAGAGAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518810.1
CDS CAA 90 bp AAGCTTTTACTTCTCACCCGGGCTGTGGTACAGGAGGATTGGTCTTaGGACACTGTAATCCTGGCAGATCCACGGGGCATGGAAGAGAAA +
Preference number: 6 (lower is better)
Translates to: KLLLLTRAVVQEDWS*DTVILADPRGMEEK
Trigger: TTTCTCTTCCATGCCCCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGGTGAGAAGTAAAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276393.8
ENST00000380573.4
ENST00000518621.1
CDS CAA 90 bp TCTCAAAATCCAGAAGACCGGGCTGTGGTACAGGAGGATTGGTCTTaGGACACTGTAATCCTGGCAGATCCACGGGGCATGGAAGAGAAA +
Preference number: 6 (lower is better)
Translates to: SQNPEDRAVVQEDWS*DTVILADPRGMEEK
Trigger: TTTCTCTTCCATGCCCCGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGTCTTCTGGATTTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS GCA 72 bp AGAGTGTGGTGTGGAAGGAACCCACCAGGCTCTCTGTaGCCTGAGACTGGGATGGAAACATTGTTGAGAATT +
Preference number: 6 (lower is better)
Translates to: RVWCGRNPPGSL*PETGMETLLRI
Trigger: AATTCTCAACAATGTTTCCATCCCAGTCTCAGGGCACAGAGAGCCTGGTGGGTTCCTTCCACACCACACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518810.1
CDS CCA 72 bp CTCTCTCTCTGCCTCTCTCTCTCTCTGCTGTCCACTTaGCTTTGCTATTCCATAGAAGGTGGATGCCACTCT +
Preference number: 6 (lower is better)
Translates to: LSLCLSLSLLST*LCYSIEGGCHS
Trigger: AGAGTGGCATCCACCTTCTATGGAATAGCAAAGCCAAGTGGACAGCAGAGAGAGAGAGAGGCAGAGAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518810.1
CDS CAA 72 bp TCTCTCTCTCTGCCTCTCTCTCTCTCTGCTGTCCACTaGGCTTTGCTATTCCATAGAAGGTGGATGCCACTC +
Preference number: 6 (lower is better)
Translates to: SLSLPLSLSAVH*ALLFHRRWMPL
Trigger: GAGTGGCATCCACCTTCTATGGAATAGCAAAGCCAAGTGGACAGCAGAGAGAGAGAGAGGCAGAGAGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518810.1
CDS CAA 72 bp TCAAAATCCAGAAGACCGGGCTGTGGTACAGGAGGATaGGTCTTTGGACACTGTAATCCTGGCAGATCCACG +
Preference number: 6 (lower is better)
Translates to: SKSRRPGCGTGG*VFGHCNPGRST
Trigger: CGTGGATCTGCCAGGATTACAGTGTCCAAAGACCAATCCTCCTGTACCACAGCCCGGTCTTCTGGATTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS TCA 72 bp CTGCCTAGGTCTCCAGCTACCTGGAGATCAGCATTCTaGACCCTTTCTCCACGGTGGCATCATAAAATTCAC +
Preference number: 6 (lower is better)
Translates to: LPRSPATWRSAF*TLSPRWHHKIH
Trigger: GTGAATTTTATGATGCCACCGTGGAGAAAGGGTTCAGAATGCTGATCTCCAGGTAGCTGGAGACCTAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS GCA 72 bp CTCCTTGCAACATGCAATTCCAGAATTACGAGAATCTaGTTTTCCGCGCTGTCTTATTCGTCCTGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: LLATCNSRITRI*FSALSYSSWLG
Trigger: CCCCAGCCAGGACGAATAAGACAGCGCGGAAAAGCAGATTCTCGTAATTCTGGAATTGCATGTTGCAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS GCA 72 bp AGCTGGGTGCGAAGATCCAGGAGACTCCTTGCAACATaGAATTCCAGAATTACGAGAATCTGCTTTTCCGCG +
Preference number: 6 (lower is better)
Translates to: SWVRRSRRLLAT*NSRITRICFSA
Trigger: CGCGGAAAAGCAGATTCTCGTAATTCTGGAATTGCATGTTGCAAGGAGTCTCCTGGATCTTCGCACCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS GCA 72 bp AATTTGGGCCAACACCAATCCGTTCATCCTTGCAGCTaGTTCTCAAAATCCAGAAGACCGGGCTGTGGTACA +
Preference number: 6 (lower is better)
Translates to: NLGQHQSVHPCS*FSKSRRPGCGT
Trigger: TGTACCACAGCCCGGTCTTCTGGATTTTGAGAAGCAGCTGCAAGGATGAACGGATTGGTGTTGGCCCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519229.5
CDS CCA 72 bp GAATCTGCTTTTCCGCGCTGTCTTATTCGTCCTGGCTaGGGGAAGATTCAGCATTCTGCACATGATTCGGAA +
Preference number: 6 (lower is better)
Translates to: ESAFPRCLIRPG*GKIQHSAHDSE
Trigger: TTCCGAATCATGTGCAGAATGCTGAATCTTCCCCCAGCCAGGACGAATAAGACAGCGCGGAAAAGCAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS CCA 72 bp TTGGCTTTGCTATTCCATAGAAGGTGGATGCCACTCTaGAAAGGAGGAGGAGTGTCCCCTTTAGCCAGAACA +
Preference number: 6 (lower is better)
Translates to: LALLFHRRWMPL*KGGGVSPLART
Trigger: TGTTCTGGCTAAAGGGGACACTCCTCCTCCTTTCCAGAGTGGCATCCACCTTCTATGGAATAGCAAAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518810.1
CDS CAA 72 bp CTACCCGAAGCTGGGTGCGAAGATCCAGGAGACTCCTaGCAACATGCAATTCCAGAATTACGAGAATCTGCT +
Preference number: 6 (lower is better)
Translates to: LPEAGCEDPGDS*QHAIPELRESA
Trigger: AGCAGATTCTCGTAATTCTGGAATTGCATGTTGCAAGGAGTCTCCTGGATCTTCGCACCCAGCTTCGGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000380572.3
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000519096.5
ENST00000521711.5
CDS CAA 72 bp CCAGGCTCTCTGTGCCCTGAGACTGGGATGGAAACATaGTTGAGAATTTGGTGCAGGAGGTTGTCAAAGTTG +
Preference number: 6 (lower is better)
Translates to: PGSLCPETGMET*LRIWCRRLSKL
Trigger: CAACTTTGACAACCTCCTGCACCAAATTCTCAACAATGTTTCCATCCCAGTCTCAGGGCACAGAGAGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518810.1
CDS CAA 72 bp TCTCTGCCTCTCTCTCTCTCTGCTGTCCACTTGGCTTaGCTATTCCATAGAAGGTGGATGCCACTCTGGAAA +
Preference number: 6 (lower is better)
Translates to: SLPLSLSAVHLA*LFHRRWMPLWK
Trigger: TTTCCAGAGTGGCATCCACCTTCTATGGAATAGCAAAGCCAAGTGGACAGCAGAGAGAGAGAGAGGCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518810.1
CDS CCA 72 bp TGCCCTGAGACTGGGATGGAAACATTGTTGAGAATTTaGTGCAGGAGGTTGTCAAAGTTGTTCACAGGGCTG +
Preference number: 6 (lower is better)
Translates to: CPETGMETLLRI*CRRLSKLFTGL
Trigger: CAGCCCTGTGAACAACTTTGACAACCTCCTGCACCAAATTCTCAACAATGTTTCCATCCCAGTCTCAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518810.1
CDS CAA 72 bp GGCTCTCTGTGCCCTGAGACTGGGATGGAAACATTGTaGAGAATTTGGTGCAGGAGGTTGTCAAAGTTGTTC +
Preference number: 6 (lower is better)
Translates to: GSLCPETGMETL*RIWCRRLSKLF
Trigger: GAACAACTTTGACAACCTCCTGCACCAAATTCTCAACAATGTTTCCATCCCAGTCTCAGGGCACAGAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518810.1
CDS TCA 72 bp GCTCTCTGTGCCCTGAGACTGGGATGGAAACATTGTTaGGAATTTGGTGCAGGAGGTTGTCAAAGTTGTTCA +
Preference number: 6 (lower is better)
Translates to: ALCALRLGWKHC*EFGAGGCQSCS
Trigger: TGAACAACTTTGACAACCTCCTGCACCAAATTCTCAACAATGTTTCCATCCCAGTCTCAGGGCACAGAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518810.1
CDS CCA 72 bp AAGAGAAAAATTTCCATTCACAAACGCCATCCGTCTTaGAGATCCTGTAGAAGGTCTCTCTTGATCCCACGG +
Preference number: 6 (lower is better)
Translates to: KRKISIHKRHPS*RSCRRSLLIPR
Trigger: CCGTGGGATCAAGAGAGACCTTCTACAGGATCTCCAAGACGGATGGCGTTTGTGAATGGAAATTTTTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000276393.8
ENST00000354550.4
ENST00000380573.4
ENST00000380582.7
ENST00000380586.5
ENST00000518621.1
ENST00000519229.5
CDS GCA 72 bp CTCCACGGTGGCATCATAAAATTCACATGCTTGATATaGTCTCTGCAATTCTTGGTGAAATATCTACAATCC +
Preference number: 6 (lower is better)
Translates to: LHGGIIKFTCLI*SLQFLVKYLQS
Trigger: GGATTGTAGATATTTCACCAAGAATTGCAGAGAGCATATCAAGCATGTGAATTTTATGATGCCACCGTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS GCA 72 bp GAACCCTTTCTCCACGGTGGCATCATAAAATTCACATaGTTGATATGCTCTCTGCAATTCTTGGTGAAATAT +
Preference number: 6 (lower is better)
Translates to: EPFLHGGIIKFT*LICSLQFLVKY
Trigger: ATATTTCACCAAGAATTGCAGAGAGCATATCAAGCATGTGAATTTTATGATGCCACCGTGGAGAAAGGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS CAA 72 bp CCCTTTCTCCACGGTGGCATCATAAAATTCACATGCTaGATATGCTCTCTGCAATTCTTGGTGAAATATCTA +
Preference number: 6 (lower is better)
Translates to: PFLHGGIIKFTC*ICSLQFLVKYL
Trigger: TAGATATTTCACCAAGAATTGCAGAGAGCATATCAAGCATGTGAATTTTATGATGCCACCGTGGAGAAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354550.4
CDS CAA 90 bp TTCTTTCTCCAAACACTGAAAGAACTGAATACTCTTCTTTTTAATTaGGGCCAACACCAATCCGTTCATCCTTGCAGCTGCTTCTCAAAA +
Preference number: 6 (lower is better)
Translates to: FFLQTLKELNTLLFN*GQHQSVHPCSCFSK
Trigger: TTTTGAGAAGCAGCTGCAAGGATGAACGGATTGGTGTTGGCCCAAATTAAAAAGAAGAGTATTCAGTTCTTTCAGTGTTTGGAGAAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519229.5