RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADPRH (Homo sapiens)

Ensembl gene IDs: ENSG00000144843

Ensembl transcript IDs: ENST00000357003.7, ENST00000465513.1, ENST00000471850.1, ENST00000478399.5, ENST00000478927.5, ENST00000481816.5, ENST00000485496.1

Found 447 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACGATGGCATCTCATTTCCCAGGTGGACATGTGCTGGGCAGCATGTaGCTAGGACTGACCCAGAAGACACACAGCACCACACAACAGGAT +
Preference number: 1 (lower is better)
Translates to: TMASHFPGGHVLGSM*LGLTQKTHSTTQQD
Trigger: ATCCTGTTGTGTGGTGCTGTGTGTCTTCTGGGTCAGTCCTAGGCACATGCTGCCCAGCACATGTCCACCTGGGAAATGAGATGCCATCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR TCA 90 bp TGCCTAGGACTGACCCAGAAGACACACAGCACCACACAACAGGATTaGTGTGATGACAAGGCCAAGACAGAAGGCTGTGGGAGGAGTGAG +
Preference number: 1 (lower is better)
Translates to: CLGLTQKTHSTTQQD*CDDKAKTEGCGRSE
Trigger: CTCACTCCTCCCACAGCCTTCTGTCTTGGCCTTGTCATCACATCAATCCTGTTGTGTGGTGCTGTGTGTCTTCTGGGTCAGTCCTAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR GCA 90 bp ATACCCCAGGTTTGCTTGCCCTTCAAATGGGACAGTTCTGAGGAATaGTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACA +
Preference number: 1 (lower is better)
Translates to: IPQVCLPFKWDSSEE*FRQRTQMAECQPPT
Trigger: TGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCAAACCTGGGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR GCA 90 bp GACAGTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTaGCAACCGCCCACAGTGGAAACCTGCTCATTAACATACCCCATA +
Preference number: 1 (lower is better)
Translates to: DSSEECFRQRTQMAE*QPPTVETCSLTYPI
Trigger: TATGGGGTATGTTAATGAGCAGGTTTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR TCA 90 bp ATGAGGAGAGTACTGAGAGCAGCTCAGAGCAGCATCTCCCAGACTTaGGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGC +
Preference number: 1 (lower is better)
Translates to: MRRVLRAAQSSISQT*VAWIAEIQLKNPQC
Trigger: GCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAAGTCTGGGAGATGCTGCTCTGAGCTGCTCTCAGTACTCTCCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR GCA 90 bp ACCAGTGTCAGATGGAAGTCAGTGGATAAATACCCCAGGTTTGCTTaGCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGA +
Preference number: 1 (lower is better)
Translates to: TSVRWKSVDKYPRFA*PSNGTVLRNALGRG
Trigger: TCCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCAAACCTGGGGTATTTATCCACTGACTTCCATCTGACACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR GCA 90 bp GAGAGCAGCTCAGAGCAGCATCTCCCAGACTTGAGTAGCTTGGATTaGAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGA +
Preference number: 1 (lower is better)
Translates to: ESSSEQHLPDLSSLD*RNPAEKSSVQEGNR
Trigger: TCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAAGTCTGGGAGATGCTGCTCTGAGCTGCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR TCA 90 bp GGCAGGACTGCTATCATCAGACCTCATTTACCCACCGCTTCCAGCTaGAAACCAGGGATTTCACAAAGGAAAAATCATGAGAGTCATAGT +
Preference number: 1 (lower is better)
Translates to: GRTAIIRPHLPTASS*KPGISQRKNHESHS
Trigger: ACTATGACTCTCATGATTTTTCCTTTGTGAAATCCCTGGTTTTCAGCTGGAAGCGGTGGGTAAATGAGGTCTGATGATAGCAGTCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR CAA 90 bp AGTACTGAGAGCAGCTCAGAGCAGCATCTCCCAGACTTGAGTAGCTaGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGC +
Preference number: 2 (lower is better)
Translates to: STESSSEQHLPDLSS*DCRNPAEKSSVQEG
Trigger: GCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAAGTCTGGGAGATGCTGCTCTGAGCTGCTCTCAGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR CAA 90 bp GATGAGGAGAGTACTGAGAGCAGCTCAGAGCAGCATCTCCCAGACTaGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTG +
Preference number: 2 (lower is better)
Translates to: DEESTESSSEQHLPD*SSLDCRNPAEKSSV
Trigger: CACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAAGTCTGGGAGATGCTGCTCTGAGCTGCTCTCAGTACTCTCCTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR-3UTR GCA 90 bp TGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGAAACTGAGCTTAAGGTaGCCAAGGGACTTGTTATCT +
Preference number: 2 (lower is better)
Translates to: CPSNGTVLRNALGRGLRWKLSLR*PRDLLS
Trigger: AGATAACAAGTCCCTTGGGCACCTTAAGCTCAGTTT...CCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR-3UTR CCA 90 bp GTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACATATCGGTATTTCCTaGAATCATCTCCCATATAAA +
Preference number: 2 (lower is better)
Translates to: VLRNALGRGLRWQSANRPHIGIS*NHLPYK
Trigger: TTTATATGGGAGATGATTCCAGGAAATACCGATATG...TGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR-3UTR GCA 90 bp TTGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCTACCCCAGGTTTGCTTaGCCTTCAAATGGGACAGTT +
Preference number: 2 (lower is better)
Translates to: LSSLDCRNPAEKSSVQEGYPRFA*PSNGTV
Trigger: AACTGTCCCATTTGAAGGGCAAGCAAACCTGGGGTA...GCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR-3UTR CCA 90 bp CAGATATTGTTAGGACCCCACATATGTCCCTCACTGTTCCCATGCCCTTTACAGAAAAGGGATAGATTCTaGAAGAACAGGATGAGCCTG +
Preference number: 2 (lower is better)
Translates to: QILLGPHICPSLFPCPLQKRDRF*KNRMSL
Trigger: CAGGCTCATCCTGTTCTTCCAGAATCTATCCCTTTT...CTGTAAAGGGCATGGGAACAGTGAGGGACATATGTGGGGTCCTAACAATATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR-3UTR TCA 90 bp TTGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCGCTGACCCTATCAATTaGGCTAAAGGACTCTTCAGT +
Preference number: 2 (lower is better)
Translates to: LSSLDCRNPAEKSSVQEGADPIN*AKGLFS
Trigger: ACTGAAGAGTCCTTTAGCTCAATTGATAGGGTCAGC...GCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR-3UTR GCA 90 bp TTGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCAAACTGAGCTTAAGGTaGCCAAGGGACTTGTTATCT +
Preference number: 2 (lower is better)
Translates to: LSSLDCRNPAEKSSVQEGKLSLR*PRDLLS
Trigger: AGATAACAAGTCCCTTGGGCACCTTAAGCTCAGTTT...GCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR GCA 72 bp TCTCATTTCCCAGGTGGACATGTGCTGGGCAGCATGTaGCTAGGACTGACCCAGAAGACACACAGCACCACA +
Preference number: 3 (lower is better)
Translates to: SHFPGGHVLGSM*LGLTQKTHSTT
Trigger: TGTGGTGCTGTGTGTCTTCTGGGTCAGTCCTAGGCACATGCTGCCCAGCACATGTCCACCTGGGAAATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR CCA 72 bp ACAGTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATaGCAGAGTGCCAACCGCCCACAGTGGAAACCTGCT +
Preference number: 3 (lower is better)
Translates to: TVLRNALGRGLR*QSANRPQWKPA
Trigger: AGCAGGTTTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR TCA 72 bp CTGACCCAGAAGACACACAGCACCACACAACAGGATTaGTGTGATGACAAGGCCAAGACAGAAGGCTGTGGG +
Preference number: 3 (lower is better)
Translates to: LTQKTHSTTQQD*CDDKAKTEGCG
Trigger: CCCACAGCCTTCTGTCTTGGCCTTGTCATCACATCAATCCTGTTGTGTGGTGCTGTGTGTCTTCTGGGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR GCA 72 bp CAGATGGCAGAGTGCCAACCGCCCACAGTGGAAACCTaGTCATTAACATACCCCATACTAGCTCTCTTCCCT +
Preference number: 3 (lower is better)
Translates to: QMAECQPPTVET*SLTYPILALFP
Trigger: AGGGAAGAGAGCTAGTATGGGGTATGTTAATGAGCAGGTTTCCACTGTGGGCGGTTGGCACTCTGCCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR GCA 72 bp GAGGAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTaGCAACCGCCCACAGTGGAAACCTGCTCATTAACA +
Preference number: 3 (lower is better)
Translates to: EECFRQRTQMAE*QPPTVETCSLT
Trigger: TGTTAATGAGCAGGTTTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR CCA 72 bp CCAAATGAATGTGACGATGGCATCTCATTTCCCAGGTaGACATGTGCTGGGCAGCATGTGCCTAGGACTGAC +
Preference number: 3 (lower is better)
Translates to: PNECDDGISFPR*TCAGQHVPRTD
Trigger: GTCAGTCCTAGGCACATGCTGCCCAGCACATGTCCACCTGGGAAATGAGATGCCATCGTCACATTCATTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR GCA 72 bp GTTTGCTTGCCCTTCAAATGGGACAGTTCTGAGGAATaGTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAA +
Preference number: 3 (lower is better)
Translates to: VCLPFKWDSSEE*FRQRTQMAECQ
Trigger: TTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR-3UTR CAA 90 bp CCCAGAAGACACACAGCACCACACAACAGGATTGATGTGATGACAAGGCCAAGAGTCTCAAAGTCCACTTaGTGGGAACCCAACTTGAGA +
Preference number: 3 (lower is better)
Translates to: PRRHTAPHNRIDVMTRPRVSKST*WEPNLR
Trigger: TCTCAAGTTGGGTTCCCACAAAGTGGACTTTGAGAC...TCTTGGCCTTGTCATCACATCAATCCTGTTGTGTGGTGCTGTGTGTCTTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR-3UTR CAA 90 bp GACCAAATGAATGTGACGATGGCATCTCATTTCCCAGGTGGACATGTGCTGGGCTCAGGTAGACAAGGATaGGGAAGAGCATCAAGAAAT +
Preference number: 3 (lower is better)
Translates to: DQMNVTMASHFPGGHVLGSGRQG*GRASRN
Trigger: ATTTCTTGATGCTCTTCCCAATCCTTGTCTACCTGA...GCCCAGCACATGTCCACCTGGGAAATGAGATGCCATCGTCACATTCATTTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR TCA 72 bp GTACTGAGAGCAGCTCAGAGCAGCATCTCCCAGACTTaGGTAGCTTGGATTGCAGAAATCCAGCTGAAAAAT +
Preference number: 3 (lower is better)
Translates to: VLRAAQSSISQT*VAWIAEIQLKN
Trigger: ATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAAGTCTGGGAGATGCTGCTCTGAGCTGCTCTCAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR GCA 72 bp GCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTaGAAGAAGGCAATAGAGGTGATAGATTCAGAGTAT +
Preference number: 3 (lower is better)
Translates to: AWIAEIQLKNPQ*KKAIEVIDSEY
Trigger: ATACTCTGAATCTATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR CCA 72 bp AGTATCTCTGAGTCTTTACCTGAAGACACTAAGGTTTaGTTTGTACAAAGGGTAAGCCAAGAATTACCAGGG +
Preference number: 3 (lower is better)
Translates to: SISESLPEDTKV*FVQRVSQELPG
Trigger: CCCTGGTAATTCTTGGCTTACCCTTTGTACAAACCAAACCTTAGTGTCTTCAGGTAAAGACTCAGAGATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR TCA 72 bp CAAGGATTGGGAAGAGCATCAAGAAATGAAGAAAGGTaGTGTATTCATTGGAACATGATTAGTTTAGCATGG +
Preference number: 3 (lower is better)
Translates to: QGLGRASRNEER*CIHWNMISLAW
Trigger: CCATGCTAAACTAATCATGTTCCAATGAATACATCACCTTTCTTCATTTCTTGATGCTCTTCCCAATCCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR GCA 72 bp ATATCGGTATTTCCTGGAATCATCTCCCATATAAACTaGTTGCATTCAGATCTTTGTCTCAAAGTCCACTTT +
Preference number: 3 (lower is better)
Translates to: ISVFPGIISHIN*LHSDLCLKVHF
Trigger: AAAGTGGACTTTGAGACAAAGATCTGAATGCAAGCAGTTTATATGGGAGATGATTCCAGGAAATACCGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp GAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAACCGGGGAAGAGGCCTTaGCTGCTGCGGGTGGACGAG +
Preference number: 4 (lower is better)
Translates to: ECFRQRTQMAECQPPTVEPGKRP*LLRVDE
Trigger: CTCGTCCACCCGCAGCAGCCAAGGCCTCTTCCCCGG...TTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp TGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGCCGTGTGGCCCCGGCTaGCGCCTTCGCCCGTGCTCA +
Preference number: 4 (lower is better)
Translates to: CPSNGTVLRNALGRGLRWPCGPG*RLRPCS
Trigger: TGAGCACGGGCGAAGGCGTCAGCCGGGGCCACACGG...CCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CCA 90 bp TTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAACCTGCTCCGGCTTCAGCTGCATaGCGTTGTGCACCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LGRGLRWQSANRPQWKPAPASAA*RCAPRH
Trigger: GTGCCTCGGTGCACAACGCCATGCAGCTGAAGCCGG...AGCAGGTTTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp TGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGCCTGGCTGTGGTCAGTaGCTCCCGTGTGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: CPSNGTVLRNALGRGLRWPGCGQ*LPCGPG
Trigger: GCCGGGGCCACACGGGAGTCACTGACCACAGCCAGG...CCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR GCA 90 bp TTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAACCTGCTTTGCCCGGCTTCAGCTaGATGGCGTTGTGCACCGAG +
Preference number: 4 (lower is better)
Translates to: LGRGLRWQSANRPQWKPALPGFS*MALCTE
Trigger: CTCGGTGCACAACGCCATGCAGCTGAAGCCGGGCAA...AGCAGGTTTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp TTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAACCTGCTTCCAGCCATTGGGCTTaGCCGGCTTCAGCTGCATGG +
Preference number: 4 (lower is better)
Translates to: LGRGLRWQSANRPQWKPASSHWA*PASAAW
Trigger: CCATGCAGCTGAAGCCGGGCAAGCCCAATGGCTGGA...AGCAGGTTTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp CAGGTTTGCTTGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGGAGCCCGGAGCCTGGTaGCCGGAATGTGGCGGCACC +
Preference number: 4 (lower is better)
Translates to: QVCLPFKWDSSEECFRQREPGAW*PECGGT
Trigger: GGTGCCGCCACATTCCGGGCACCAGGCTCCGGGCTC...CCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCAAACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CCA 90 bp GACCAAATGAATGTGACGATGGCATCTCATTTCCCAGGTGGACATGTGCTGGGCTGCACATGGCCCGCATaGCAGCCCCACAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: DQMNVTMASHFPGGHVLGCTWPA*QPHSRP
Trigger: AGGGCGGCTGTGGGGCTGCCATGCGGGCCATGTGCA...GCCCAGCACATGTCCACCTGGGAAATGAGATGCCATCGTCACATTCATTTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp GCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAACCTGCTCATTGGCCATGCCCGGCTTTaGAAAGAAACGGGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: AEDSDGRVPTAHSGNLLIGHARL*KETGRL
Trigger: CAACCGCCCCGTTTCTTTCCAAAGCCGGGCATGGCC...AATGAGCAGGTTTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR GCA 90 bp GACCAAATGAATGTGACGATGGCATCTCATTTCCCAGGTGGACATGTGCTGGGCGTCGCCCGCCCCAAATaGTCTGAAGAGCCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: DQMNVTMASHFPGGHVLGVARPK*SEEPGA
Trigger: GGCTCCGGGCTCTTCAGAGCATTTGGGGCGGGCGAC...GCCCAGCACATGTCCACCTGGGAAATGAGATGCCATCGTCACATTCATTTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR GCA 90 bp GCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAACCTGCTCATTGCTGCTTCCGGGCCATaGCCGGCTTTGGAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: AEDSDGRVPTAHSGNLLIAASGP*PALERN
Trigger: GTTTCTTTCCAAAGCCGGGCATGGCCCGGAAGCAGC...AATGAGCAGGTTTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CCA 90 bp TGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGTCCAAGGCGGCTTCCTaGCACCGCCGCGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: CPSNGTVLRNALGRGLRWSKAAS*HRRALL
Trigger: CAGAAGGGCGCGGCGGTGCCAGGAAGCCGCCTTGGA...CCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR TCA 90 bp GTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACGCCCTCATGGCTGTTaGAGGGAATCCTCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: VLRNALGRGLRWQSANRPRPHGC*RESSSH
Trigger: ATGGCTGGAGGATTCCCTTCAACAGCCATGAGGGCG...TGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp GTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGGGCATCTCCAGCTaGACTCAGCACCATAGCAGC +
Preference number: 4 (lower is better)
Translates to: VLRNALGRGLRWQSANRPQGISS*TQHHSS
Trigger: GCTGCTATGGTGCTGAGTGCAGCTGGAGATGCCCTG...TGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp CAGGTTTGCTTGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGGGGCATCGTGCCCACTaGTGCCACCCCAGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: QVCLPFKWDSSEECFRQRGHRAH*CHPSQS
Trigger: ACTCTGGCTGGGGTGGCAGCAGTGGGCACGATGCCC...CCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCAAACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp GAAGGTGGCCAAGTGCCTGAACAATCAAAGCAGGTTTCACTCAGGAAGCTCTATGCACCCAAGCGAGAGTaGACGGGACCTCCGTCGCCC +
Preference number: 4 (lower is better)
Translates to: EGGQVPEQSKQVSLRKLYAPKRE*TGPPSP
Trigger: GGGCGACGGAGGTCCCGTCCACTCTCGCTTGGGTGC...ATAGAGCTTCCTGAGTGAAACCTGCTTTGATTGTTCAGGCACTTGGCCACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR TCA 90 bp GCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAACCTGCTCATTAGGGAAGGTAGGGGCTaGTTCTCCATCCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: AEDSDGRVPTAHSGNLLIREGRG*FSIQNP
Trigger: GGGATTTTGGATGGAGAATCAGCCCCTACCTTCCCT...AATGAGCAGGTTTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp CAGGTTTGCTTGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGCATCGTGCCCACTGCTaGCACCCCAGCCAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: QVCLPFKWDSSEECFRQRHRAHC*HPSQSS
Trigger: GCTACTCTGGCTGGGGTGGCAGCAGTGGGCACGATG...CCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCAAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp CCCAGAAGACACACAGCACCACACAACAGGATTGATGTGATGACAAGGCCAAGAATCATGGGGGCATCGTaGCCACTGCTGCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: PRRHTAPHNRIDVMTRPRIMGAS*PLLPPQ
Trigger: CTGGGGTGGCAGCAGTGGGCACGATGCCCCCATGAT...TCTTGGCCTTGTCATCACATCAATCCTGTTGTGTGGTGCTGTGTGTCTTCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp TGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGAGAGGCCTTGGCTGCTaGGGGTGGACGAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: CPRDLLSQNSLSTRLRLLRGLGC*GWTRAR
Trigger: CCGCGCCCTCGTCCACCCGCAGCAGCCAAGGCCTCT...CAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp TGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGCCCAGCTGGGCCAACTaGCGGTGTATCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: CPSNGTVLRNALGRGLRWPSWAN*RCIFSP
Trigger: TGGGGAGAAGATACACCGGCAGTTGGCCCAGCTGGG...CCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp GAAGGTGGCCAAGTGCCTGAACAATCAAAGCAGGTTTCACTCAGGAAGCTCTATCATCGTGCCCACTGCTaGCACCCCAGCCAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: EGGQVPEQSKQVSLRKLYHRAHC*HPSQSS
Trigger: GCTACTCTGGCTGGGGTGGCAGCAGTGGGCACGATG...ATAGAGCTTCCTGAGTGAAACCTGCTTTGATTGTTCAGGCACTTGGCCACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp GAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAACAATTGCTGGGCTCTaGAGAGGGTGTCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: ECFRQRTQMAECQPPTVETIAGL*RGCPRS
Trigger: AGACCTTGGACACCCTCTCCAGAGCCCAGCAATTGT...TTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp GAAGGTGGCCAAGTGCCTGAACAATCAAAGCAGGTTTCACTCAGGAAGCTCTATCCGGCTTCAGCTGCATaGCGTTGTGCACCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: EGGQVPEQSKQVSLRKLYPASAA*RCAPRH
Trigger: GTGCCTCGGTGCACAACGCCATGCAGCTGAAGCCGG...ATAGAGCTTCCTGAGTGAAACCTGCTTTGATTGTTCAGGCACTTGGCCACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp GACCAAATGAATGTGACGATGGCATCTCATTTCCCAGGTGGACATGTGCTGGGCCCACAGCCGCCCTCATaGCTGTTGAAGGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: DQMNVTMASHFPGGHVLGPQPPS*LLKGIL
Trigger: GAGGATTCCCTTCAACAGCCATGAGGGCGGCTGTGG...GCCCAGCACATGTCCACCTGGGAAATGAGATGCCATCGTCACATTCATTTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp CCCAGAAGACACACAGCACCACACAACAGGATTGATGTGATGACAAGGCCAAGACCTGTTGGGTGGTGGTaGGTCATCCGACCACTCTCG +
Preference number: 4 (lower is better)
Translates to: PRRHTAPHNRIDVMTRPRPVGWW*VIRPLS
Trigger: CGAGAGTGGTCGGATGACCCACCACCACCCAACAGG...TCTTGGCCTTGTCATCACATCAATCCTGTTGTGTGGTGCTGTGTGTCTTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp GACCAAATGAATGTGACGATGGCATCTCATTTCCCAGGTGGACATGTGCTGGGCATACCTGCTGTAGCCTaGACTGGAACGCGCGAGCGA +
Preference number: 4 (lower is better)
Translates to: DQMNVTMASHFPGGHVLGIPAVA*TGTRER
Trigger: TCGCTCGCGCGTTCCAGTCCAGGCTACAGCAGGTAT...GCCCAGCACATGTCCACCTGGGAAATGAGATGCCATCGTCACATTCATTTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CCA 90 bp GTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCAAATTGCAAGCTGGGATaGGGGAAGAAGACCGGCATC +
Preference number: 4 (lower is better)
Translates to: VLRNALGRGLRWQSANRPNCKLG*GKKTGI
Trigger: GATGCCGGTCTTCTTCCCCCATCCCAGCTTGCAATT...TGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR TCA 90 bp CAGGTTTGCTTGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGCGCCCTCATGGCTGTTaGAGGGAATCCTCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: QVCLPFKWDSSEECFRQRRPHGC*RESSSH
Trigger: ATGGCTGGAGGATTCCCTTCAACAGCCATGAGGGCG...CCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCAAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp CAGGTTTGCTTGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGTATGGTGTGGGAACCTaGGACCGATGCACATGGCCC +
Preference number: 4 (lower is better)
Translates to: QVCLPFKWDSSEECFRQRYGVGT*DRCTWP
Trigger: GGGCCATGTGCATCGGTCTCAGGTTCCCACACCATA...CCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCAAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp CAGGTTTGCTTGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGAAGAAACGGGGCGGTTaGCACGCTCCCACGATTTGC +
Preference number: 4 (lower is better)
Translates to: QVCLPFKWDSSEECFRQRKKRGG*HAPTIC
Trigger: GCAAATCGTGGGAGCGTGTCAACCGCCCCGTTTCTT...CCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCAAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR TCA 90 bp GTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCATTCAGAACTAAGATCTaGTCAGCTGCTTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: VLRNALGRGLRWQSANRPFRTKI*SAASGP
Trigger: TGGCCCGGAAGCAGCTGATCAGATCTTAGTTCTGAA...TGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR GCA 90 bp CAGGTTTGCTTGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGCAGGGCATCTCCAGCTaGACTCAGCACCATAGCAGC +
Preference number: 4 (lower is better)
Translates to: QVCLPFKWDSSEECFRQRQGISS*TQHHSS
Trigger: GCTGCTATGGTGCTGAGTGCAGCTGGAGATGCCCTG...CCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCAAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp GAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAATCTGCTGTGGCCAAGTaGATCACTGTGTCGTCACTA +
Preference number: 4 (lower is better)
Translates to: ECFRQRTQMAECQPPTVESAVAK*ITVSSL
Trigger: TAGTGACGACACAGTGATGCACTTGGCCACAGCAGA...TTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp GAAGGTGGCCAAGTGCCTGAACAATCAAAGCAGGTTTCACTCAGGAAGCTCTATAGCTGCATGGCGTTGTaGACCGAGGCACCACCTGGT +
Preference number: 4 (lower is better)
Translates to: EGGQVPEQSKQVSLRKLYSCMAL*TEAPPG
Trigger: ACCAGGTGGTGCCTCGGTGCACAACGCCATGCAGCT...ATAGAGCTTCCTGAGTGAAACCTGCTTTGATTGTTCAGGCACTTGGCCACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp GAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAGAGAAGGTGGCCAAGTaGCTGAACAATCAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: ECFRQRTQMAECQPPTVEEKVAK*LNNQSR
Trigger: CCTGCTTTGATTGTTCAGGCACTTGGCCACCTTCTC...TTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp CCCAGAAGACACACAGCACCACACAACAGGATTGATGTGATGACAAGGCCAAGACCCGGGACAGCGGTTTaGCCATCTGTAAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: PRRHTAPHNRIDVMTRPRPGTAV*PSVNWR
Trigger: CCTCCAGTTTACAGATGGGCAAACCGCTGTCCCGGG...TCTTGGCCTTGTCATCACATCAATCCTGTTGTGTGGTGCTGTGTGTCTTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CCA 90 bp CAGGTTTGCTTGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGGTCCCTCACAATTGCTaGGCTCTGGAGAGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: QVCLPFKWDSSEECFRQRVPHNC*ALERVS
Trigger: GGACACCCTCTCCAGAGCCCAGCAATTGTGAGGGAC...CCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCAAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp TTGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCCACCGAGGCACCACCTaGTGCCCGCCCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: LSSLDCRNPAEKSSVQEGHRGTT*CPPIHV
Trigger: GACATGGATGGGCGGGCACCAGGTGGTGCCTCGGTG...GCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp GTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCATCCCCACTGCAAGGGTaGTCTGCTATTCACAGCATA +
Preference number: 4 (lower is better)
Translates to: VLRNALGRGLRWQSANRPSPLQG*SAIHSI
Trigger: TATGCTGTGAATAGCAGACCACCCTTGCAGTGGGGA...TGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp GAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAATCTCATTTCCCAGGTaGACATGTGCTGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: ECFRQRTQMAECQPPTVEISFPR*TCAGQH
Trigger: ATGCTGCCCAGCACATGTCCACCTGGGAAATGAGAT...TTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp TTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAACCTGCTGCTGAGAGCGAAGTTTaGGGTGGAAGTTTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LGRGLRWQSANRPQWKPAAESEV*GGSFEV
Trigger: AACCTCAAAACTTCCACCCCAAACTTCGCTCTCAGC...AGCAGGTTTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp CAGGTTTGCTTGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGCCATGGAATGCAGGCTaGAGAGCCCCTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: QVCLPFKWDSSEECFRQRPWNAG*RAPGEG
Trigger: TCCTTCTCCAGGGGCTCTCCAGCCTGCATTCCATGG...CCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCAAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR TCA 90 bp GAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAAACATTCCTATGGGATaGACTAGAAGGTGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: ECFRQRTQMAECQPPTVENIPMG*TRRWQD
Trigger: GTCCTGCCACCTTCTAGTTCATCCCATAGGAATGTT...TTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAGAGGCCTTGGCTGCTaGGGGTGGACGAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGRGLGC*GWTRAR
Trigger: CCGCGCCCTCGTCCACCCGCAGCAGCCAAGGCCTCT...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp TTGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCCGAGGCACCACCTGGTaGCCGCCCATCCATGTCTTC +
Preference number: 4 (lower is better)
Translates to: LSSLDCRNPAEKSSVQEGRGTTW*PPIHVF
Trigger: GAAGACATGGATGGGCGGGCACCAGGTGGTGCCTCG...GCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp GTGGAAACCTGCTCATTAACATACCCCATACTAGCTCTCTTCCCTTCCTGGTTTAGCTGCATGGCGTTGTaGACCGAGGCACCACCTGGT +
Preference number: 4 (lower is better)
Translates to: VETCSLTYPILALFPSWFSCMAL*TEAPPG
Trigger: ACCAGGTGGTGCCTCGGTGCACAACGCCATGCAGCT...AAACCAGGAAGGGAAGAGAGCTAGTATGGGGTATGTTAATGAGCAGGTTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp GTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCAAACGACGAAGATGGATaGGTTCCACTACCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: VLRNALGRGLRWQSANRPNDEDG*VPLPSY
Trigger: GTAACTGGGTAGTGGAACGCATCCATCTTCGTCGTT...TGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR GCA 90 bp TGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGCCGGGTGTGCCCAGATaGTTGAAGAGCGTACTGAGT +
Preference number: 4 (lower is better)
Translates to: CPSNGTVLRNALGRGLRWPGVPR*LKSVLS
Trigger: ACTCAGTACGCTCTTCAAGCATCTGGGCACACCCGG...CCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGCTTGGCTGCTGCGGGTaGACGAGGGCGCGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLLGCCG*TRARVG
Trigger: CCCAACCCGCGCCCTCGTCCACCCGCAGCAGCCAAG...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp TGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGTGCTGTAGCCTGGACTaGAACGCGCGAGCGACGGGC +
Preference number: 4 (lower is better)
Translates to: CPRDLLSQNSLSTRLRLLCCSLD*NARATG
Trigger: GCCCGTCGCTCGCGCGTTCCAGTCCAGGCTACAGCA...CAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp GTGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGCCCCTGCTGTAGCCTaGACTGGAACGCGCGAGCGA +
Preference number: 4 (lower is better)
Translates to: VPKGLVISKFPEYKVKTLAPAVA*TGTRER
Trigger: TCGCTCGCGCGTTCCAGTCCAGGCTACAGCAGGGGC...AAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357003.7
CDS-3UTR CCA 90 bp TCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCTCACCGAGGCACCACCTaGTGCCCGCCCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: SLPGFISPFSYRYFLESSHRGTT*CPPIHV
Trigger: GACATGGATGGGCGGGCACCAGGTGGTGCCTCGGTG...AGATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp CAGGTTTGCTTGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGTGGAAAAAGGCTCGGTaGGCAAGCTCCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: QVCLPFKWDSSEECFRQRWKKAR*ASSFQE
Trigger: CTCCTGGAAGGAGCTTGCCCACCGAGCCTTTTTCCA...CCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCAAACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp TTCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCCTACCCCCGACCCCCTaGGGCACACACAACCCTCCT +
Preference number: 4 (lower is better)
Translates to: FPSWFHFPILISVFPGIILPPTP*GTHNPP
Trigger: AGGAGGGTTGTGTGTGCCCCAGGGGGTCGGGGGTAG...GATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp ATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATAGAAGAGCCCGGAGCCTaGTGCCCGGAATGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: IAEIQLKNPQCKKAIEVIEEPGA*CPECGG
Trigger: GCCGCCACATTCCGGGCACCAGGCTCCGGGCTCTTC...TATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CCA 90 bp GAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAAGTAAACGACGAAGATaGATGCGTTCCACTACCCAG +
Preference number: 4 (lower is better)
Translates to: ECFRQRTQMAECQPPTVESKRRR*MRSTTQ
Trigger: CTGGGTAGTGGAACGCATCCATCTTCGTCGTTTACT...TTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR TCA 90 bp CAGGTTTGCTTGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGAGGGAAGGTAGGGGCTaGTTCTCCATCCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: QVCLPFKWDSSEECFRQRREGRG*FSIQNP
Trigger: GGGATTTTGGATGGAGAATCAGCCCCTACCTTCCCT...CCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCAAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp TTGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCCTGTTGGCCATGGAATaGAGGCTGGAGAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LSSLDCRNPAEKSSVQEGLLAME*RLESPC
Trigger: GCAGGGGCTCTCCAGCCTGCATTCCATGGCCAACAG...GCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357003.7
CDS-3UTR GCA 90 bp TGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGAAGTGCTTCTGCAGCTaGACTGCTGTTGGCCATGGA +
Preference number: 4 (lower is better)
Translates to: CPSNGTVLRNALGRGLRWKCFCS*TAVGHG
Trigger: TCCATGGCCAACAGCAGTGCAGCTGCAGAAGCACTT...CCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp TGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGTTCCAGAAGTGCTTCTaGAGCTGCACTGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: CPSNGTVLRNALGRGLRWFQKCF*SCTAVG
Trigger: GCCAACAGCAGTGCAGCTGCAGAAGCACTTCTGGAA...CCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp CCCAGAAGACACACAGCACCACACAACAGGATTGATGTGATGACAAGGCCAAGATTCCAGAAGTGCTTCTaGAGCTGCACTGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: PRRHTAPHNRIDVMTRPRFQKCF*SCTAVG
Trigger: GCCAACAGCAGTGCAGCTGCAGAAGCACTTCTGGAA...TCTTGGCCTTGTCATCACATCAATCCTGTTGTGTGGTGCTGTGTGTCTTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp GAAGGTGGCCAAGTGCCTGAACAATCAAAGCAGGTTTCACTCAGGAAGCTCTATGGAGGCTTCCAGAAGTaGTTCTGCAGCTGCACTGCT +
Preference number: 4 (lower is better)
Translates to: EGGQVPEQSKQVSLRKLYGGFQK*FCSCTA
Trigger: AGCAGTGCAGCTGCAGAAGCACTTCTGGAAGCCTCC...ATAGAGCTTCCTGAGTGAAACCTGCTTTGATTGTTCAGGCACTTGGCCACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp TTGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCCCCAGCTGGGCCAACTaGCGGTGTATCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LSSLDCRNPAEKSSVQEGPSWAN*RCIFSP
Trigger: TGGGGAGAAGATACACCGGCAGTTGGCCCAGCTGGG...GCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp TTGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCTTGCCCGGCTTCAGCTaGATGGCGTTGTGCACCGAG +
Preference number: 4 (lower is better)
Translates to: LSSLDCRNPAEKSSVQEGLPGFS*MALCTE
Trigger: CTCGGTGCACAACGCCATGCAGCTGAAGCCGGGCAA...GCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp ATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATAGGGCATCGTGCCCACTaGTGCCACCCCAGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: IAEIQLKNPQCKKAIEVIGHRAH*CHPSQS
Trigger: ACTCTGGCTGGGGTGGCAGCAGTGGGCACGATGCCC...TATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp ATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATAACCGCCGCGCCCTTCTaGACCCAAGCGAGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: IAEIQLKNPQCKKAIEVITAAPF*TQARVD
Trigger: GTCCACTCTCGCTTGGGTGCAGAAGGGCGCGGCGGT...TATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAACTTGGCTGCTGCGGGTaGACGAGGGCGCGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLELGCCG*TRARVG
Trigger: CCCAACCCGCGCCCTCGTCCACCCGCAGCAGCCAAG...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp ATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATATGCTGTAGCCTGGACTaGAACGCGCGAGCGACGGGC +
Preference number: 4 (lower is better)
Translates to: IAEIQLKNPQCKKAIEVICCSLD*NARATG
Trigger: GCCCGTCGCTCGCGCGTTCCAGTCCAGGCTACAGCA...TATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp TGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGTCCAAGCCGCCCAGCTaGGCCAACTGCCGGTGTATC +
Preference number: 4 (lower is better)
Translates to: CPRDLLSQNSLSTRLRLLSKPPS*ANCRCI
Trigger: GATACACCGGCAGTTGGCCCAGCTGGGCGGCTTGGA...CAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
CDS-3UTR CCA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGATGCACATGGCCCGCATaGCAGCCCCACAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGCTWPA*QPHSRP
Trigger: AGGGCGGCTGTGGGGCTGCCATGCGGGCCATGTGCA...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp GCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAACCTGCTCATTAAAAGGGATAGATTCTaGAAGAACAGGATGAGCCTG +
Preference number: 4 (lower is better)
Translates to: AEDSDGRVPTAHSGNLLIKRDRF*KNRMSL
Trigger: CAGGCTCATCCTGTTCTTCCAGAATCTATCCCTTTT...AATGAGCAGGTTTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp AACAAAATTGGTAATGTGTTAACTGCCATGATGAGGAGAGTACTGAGAGCAGCTCTACCCCCGACCCCCTaGGGCACACACAACCCTCCT +
Preference number: 4 (lower is better)
Translates to: NKIGNVLTAMMRRVLRAALPPTP*GTHNPP
Trigger: AGGAGGGTTGTGTGTGCCCCAGGGGGTCGGGGGTAG...AGCTGCTCTCAGTACTCTCCTCATCATGGCAGTTAACACATTACCAATTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp CAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATAGATTCAGAGTATTCAGTGACTCCCGTGTaGCCCCGGCTGACGCCTTCG +
Preference number: 4 (lower is better)
Translates to: QLKNPQCKKAIEVIDSEYSVTPV*PRLTPS
Trigger: CGAAGGCGTCAGCCGGGGCCACACGGGAGTCACTGA...ATACTCTGAATCTATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CCA 90 bp GTGGAAACCTGCTCATTAACATACCCCATACTAGCTCTCTTCCCTTCCTGGTTTGACTGGGAATCCTCATaGTCGGCCACACTCGGAGAG +
Preference number: 4 (lower is better)
Translates to: VETCSLTYPILALFPSWFDWESS*SATLGE
Trigger: CTCTCCGAGTGTGGCCGACCATGAGGATTCCCAGTC...AAACCAGGAAGGGAAGAGAGCTAGTATGGGGTATGTTAATGAGCAGGTTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CCA 90 bp CCCAGAAGACACACAGCACCACACAACAGGATTGATGTGATGACAAGGCCAAGACACGATTTGCAAGACTaGGAATCCTCATGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: PRRHTAPHNRIDVMTRPRHDLQD*ESSWSA
Trigger: GGCCGACCATGAGGATTCCCAGTCTTGCAAATCGTG...TCTTGGCCTTGTCATCACATCAATCCTGTTGTGTGGTGCTGTGTGTCTTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR TCA 90 bp TTCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCCTTGGCCGCGCTGAGTaGGCTAATCTTGGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: FPSWFHFPILISVFPGIILGRAE*ANLGAS
Trigger: GGAGGCTCCAAGATTAGCTCACTCAGCGCGGCCAAG...GATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR GCA 90 bp GTGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTCCCAGCTGGGCCAACTaGCGGTGTATCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: VPKGLVISKFPEYKVKTLPSWAN*RCIFSP
Trigger: TGGGGAGAAGATACACCGGCAGTTGGCCCAGCTGGG...AAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
CDS-3UTR GCA 90 bp AACAAAATTGGTAATGTGTTAACTGCCATGATGAGGAGAGTACTGAGAGCAGCTCGAGGCACCACCTGGTaGCCGCCCATCCATGTCTTC +
Preference number: 4 (lower is better)
Translates to: NKIGNVLTAMMRRVLRAARGTTW*PPIHVF
Trigger: GAAGACATGGATGGGCGGGCACCAGGTGGTGCCTCG...AGCTGCTCTCAGTACTCTCCTCATCATGGCAGTTAACACATTACCAATTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp CCCAGAAGACACACAGCACCACACAACAGGATTGATGTGATGACAAGGCCAAGATCCGACCACTCTCGATaGTCACTTGGATCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: PRRHTAPHNRIDVMTRPRSDHSR*SLGSVC
Trigger: ACACACTGATCCAAGTGAGCATCGAGAGTGGTCGGA...TCTTGGCCTTGTCATCACATCAATCCTGTTGTGTGGTGCTGTGTGTCTTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGGGCATCGTGCCCACTaGTGCCACCCCAGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLGHRAH*CHPSQS
Trigger: ACTCTGGCTGGGGTGGCAGCAGTGGGCACGATGCCC...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp TTGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCGTGCTGGGCAGCATGTaGCTAGGACTGACCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LSSLDCRNPAEKSSVQEGVLGSM*LGLTQK
Trigger: CTTCTGGGTCAGTCCTAGGCACATGCTGCCCAGCAC...GCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp TTGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCCGGGATCGCGATACCTaGTGTAGCCTGGACTGGAAC +
Preference number: 4 (lower is better)
Translates to: LSSLDCRNPAEKSSVQEGRDRDT*CSLDWN
Trigger: GTTCCAGTCCAGGCTACAGCAGGTATCGCGATCCCG...GCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR GCA 90 bp CAGGTTTGCTTGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGCACGCTCCCACGATTTaGAAGACTGGGAATCCTCAT +
Preference number: 4 (lower is better)
Translates to: QVCLPFKWDSSEECFRQRHAPTI*KTGNPH
Trigger: ATGAGGATTCCCAGTCTTGCAAATCGTGGGAGCGTG...CCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCAAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR GCA 90 bp TGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGTGTGCTTCTGTGAATTaGAAGCTGGGATGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: CPSNGTVLRNALGRGLRWCASVN*KLGWGK
Trigger: CTTCCCCCATCCCAGCTTGCAATTCACAGAAGCACA...CCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAACTTGGCTGCTGCGGGTaGACGAGGGCGCGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTELGCCG*TRARVG
Trigger: CCCAACCCGCGCCCTCGTCCACCCGCAGCAGCCAAG...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGTGCTGTAGCCTGGACTaGAACGCGCGAGCGACGGGC +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLCCSLD*NARATG
Trigger: GCCCGTCGCTCGCGCGTTCCAGTCCAGGCTACAGCA...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp TTCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCCCATGGAATGCAGGCTaGAGAGCCCCTGCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: FPSWFHFPILISVFPGIIPWNAG*RAPAVA
Trigger: GGCTACAGCAGGGGCTCTCCAGCCTGCATTCCATGG...GATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357003.7
CDS-3UTR CCA 90 bp CCCAGAAGACACACAGCACCACACAACAGGATTGATGTGATGACAAGGCCAAGACAAGAGCTTCTGCTGTaGCCAAGTGCATCACTGTGT +
Preference number: 4 (lower is better)
Translates to: PRRHTAPHNRIDVMTRPRQELLL*PSASLC
Trigger: ACACAGTGATGCACTTGGCCACAGCAGAAGCTCTTG...TCTTGGCCTTGTCATCACATCAATCCTGTTGTGTGGTGCTGTGTGTCTTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGCACCGAGGCACCACCTaGTGCCCGCCCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLHRGTT*CPPIHV
Trigger: GACATGGATGGGCGGGCACCAGGTGGTGCCTCGGTG...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGACACCGAGGCACCACCTaGTGCCCGCCCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGHRGTT*CPPIHV
Trigger: GACATGGATGGGCGGGCACCAGGTGGTGCCTCGGTG...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp CAGGTTTGCTTGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGATCAGTGTGTCCAGTTaGCTATGGTGTGGGAACCTG +
Preference number: 4 (lower is better)
Translates to: QVCLPFKWDSSEECFRQRISVSS*LWCGNL
Trigger: CAGGTTCCCACACCATAGCCAACTGGACACACTGAT...CCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCAAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp CCCAGAAGACACACAGCACCACACAACAGGATTGATGTGATGACAAGGCCAAGACTCTCGATGCTCACTTaGATCAGTGTGTCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: PRRHTAPHNRIDVMTRPRLSMLT*ISVSSW
Trigger: CCAACTGGACACACTGATCCAAGTGAGCATCGAGAG...TCTTGGCCTTGTCATCACATCAATCCTGTTGTGTGGTGCTGTGTGTCTTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp TGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGCGCCCTCATGGCTGTTaGAGGGAATCCTCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: CPRDLLSQNSLSTRLRLLRPHGC*RESSSH
Trigger: ATGGCTGGAGGATTCCCTTCAACAGCCATGAGGGCG...CAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
CDS-3UTR TCA 90 bp TGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGACCACACAACAGGATTaGTGTGATGACAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: CPSNGTVLRNALGRGLRWTTQQD*CDDKAK
Trigger: CTTGGCCTTGTCATCACATCAATCCTGTTGTGTGGT...CCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp TGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGAACATTCCTATGGGATaGACTAGAAGGTGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: CPSNGTVLRNALGRGLRWNIPMG*TRRWQD
Trigger: GTCCTGCCACCTTCTAGTTCATCCCATAGGAATGTT...CCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAACCGCCCCAAATGCTCTaGAGAGCCCGGAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLEPPQML*RARSLV
Trigger: CACCAGGCTCCGGGCTCTTCAGAGCATTTGGGGCGG...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR GCA 90 bp GTGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTCAGGGCATCTCCAGCTaGACTCAGCACCATAGCAGC +
Preference number: 4 (lower is better)
Translates to: VPKGLVISKFPEYKVKTLQGISS*TQHHSS
Trigger: GCTGCTATGGTGCTGAGTGCAGCTGGAGATGCCCTG...AAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
CDS-3UTR GCA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGACGAGGCACCACCTGGTaGCCGCCCATCCATGTCTTC +
Preference number: 4 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGRGTTW*PPIHVF
Trigger: GAAGACATGGATGGGCGGGCACCAGGTGGTGCCTCG...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp CAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATAGATTCAGAGTATTCCAGCCATTGGGCTTaGCCGGCTTCAGCTGCATGG +
Preference number: 4 (lower is better)
Translates to: QLKNPQCKKAIEVIDSEYSSHWA*PASAAW
Trigger: CCATGCAGCTGAAGCCGGGCAAGCCCAATGGCTGGA...ATACTCTGAATCTATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp GAAGGTGGCCAAGTGCCTGAACAATCAAAGCAGGTTTCACTCAGGAAGCTCTATTCCGACCACTCTCGATaGTCACTTGGATCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: EGGQVPEQSKQVSLRKLYSDHSR*SLGSVC
Trigger: ACACACTGATCCAAGTGAGCATCGAGAGTGGTCGGA...ATAGAGCTTCCTGAGTGAAACCTGCTTTGATTGTTCAGGCACTTGGCCACCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGACATCGTGCCCACTGCTaGCACCCCAGCCAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGHRAHC*HPSQSS
Trigger: GCTACTCTGGCTGGGGTGGCAGCAGTGGGCACGATG...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAGGGCATCGTGCCCACTaGTGCCACCCCAGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLEGHRAH*CHPSQS
Trigger: ACTCTGGCTGGGGTGGCAGCAGTGGGCACGATGCCC...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAATCATGGGGGCATCGTaGCCACTGCTGCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGIMGAS*PLLPPQ
Trigger: CTGGGGTGGCAGCAGTGGGCACGATGCCCCCATGAT...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp TGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGTTAATGCCTATTGGCTaGCCAAGCACTGTGCTAGGT +
Preference number: 4 (lower is better)
Translates to: CPSNGTVLRNALGRGLRWLMPIG*PSTVLG
Trigger: ACCTAGCACAGTGCTTGGGCAGCCAATAGGCATTAA...CCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp CCTGGAATCATCTCCCATATAAACTGCTTGCATTCAGATCTTTGTCTCAAAGTCCTGTTGGCCATGGAATaGAGGCTGGAGAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PGIISHINCLHSDLCLKVLLAME*RLESPW
Trigger: CCAGGGGCTCTCCAGCCTGCATTCCATGGCCAACAG...GACTTTGAGACAAAGATCTGAATGCAAGCAGTTTATATGGGAGATGATTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CCA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAACCGGGGAAGAGGCCTTaGCTGCTGCGGGTGGACGAG +
Preference number: 4 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKPGKRP*LLRVDE
Trigger: CTCGTCCACCCGCAGCAGCCAAGGCCTCTTCCCCGG...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGTCCAAGCCGCCCAGCTaGGCCAACTGCCGGTGTATC +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLSKPPS*ANCRCI
Trigger: GATACACCGGCAGTTGGCCCAGCTGGGCGGCTTGGA...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAATGCACATGGCCCGCATaGCAGCCCCACAGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTECTWPA*QPHSRP
Trigger: AGGGCGGCTGTGGGGCTGCCATGCGGGCCATGTGCA...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp TTGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCGTGTCCAGTTGGCTATaGTGTGGGAACCTGAGACCG +
Preference number: 4 (lower is better)
Translates to: LSSLDCRNPAEKSSVQEGVSSWL*CGNLRP
Trigger: CGGTCTCAGGTTCCCACACCATAGCCAACTGGACAC...GCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp ATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATACCTGTTGGGTGGTGGTaGGTCATCCGACCACTCTCG +
Preference number: 4 (lower is better)
Translates to: IAEIQLKNPQCKKAIEVIPVGWW*VIRPLS
Trigger: CGAGAGTGGTCGGATGACCCACCACCACCCAACAGG...TATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGCTCTCGCCTGGCTGTaGTCAGTGACTCCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLALAWL*SVTPVW
Trigger: CCACACGGGAGTCACTGACCACAGCCAGGCGAGAGC...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAACTGGTGCCCGGAATGTaGCGGCACCGGAAAGCCGGC +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTELVPGM*RHRKAG
Trigger: GCCGGCTTTCCGGTGCCGCCACATTCCGGGCACCAG...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAATCCAAGGCGGCTTCCTaGCACCGCCGCGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTESKAAS*HRRALL
Trigger: CAGAAGGGCGCGGCGGTGCCAGGAAGCCGCCTTGGA...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478399.5
ENST00000478927.5
3UTR CAA 72 bp ACATATGTCCCTCACTGTTCCCATGCCCTTTACAGCTaGCCCCTGCAAGTATCTCTGAGTCTTTACCTGAAG +
Preference number: 4 (lower is better)
Translates to: TYVPHCSHALYS*PLQVSLSLYLK
Trigger: CTTCAGGTAAAGACTCAGAGATACTTGCAGGGGCAAGCTGTAAAGGGCATGGGAACAGTGAGGGACATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR CAA 72 bp AGCAGCTCAGAGCAGCATCTCCCAGACTTGAGTAGCTaGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SSSEQHLPDLSS*DCRNPAEKSSV
Trigger: CACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAAGTCTGGGAGATGCTGCTCTGAGCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp GTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACTCTACAAAGTAGCCTaGTTGGACAATGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: VLRNALGRGLRWQSANRPLYKVA*LDNVLF
Trigger: AAAAAGTACATTGTCCAATCAGGCTACTTTGTAGAG...TGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAATCATGGGGGCATCGTaGCCACTGCTGCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLEIMGAS*PLLPPQ
Trigger: CTGGGGTGGCAGCAGTGGGCACGATGCCCCCATGAT...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp CAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATAGATTCAGAGTATGTGCTGGGCAGCATGTaGCTAGGACTGACCCAGAAG +
Preference number: 4 (lower is better)
Translates to: QLKNPQCKKAIEVIDSEYVLGSM*LGLTQK
Trigger: CTTCTGGGTCAGTCCTAGGCACATGCTGCCCAGCAC...ATACTCTGAATCTATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp AACAAAATTGGTAATGTGTTAACTGCCATGATGAGGAGAGTACTGAGAGCAGCTCAGCTGCACTGCTGTTaGCCATGGAATGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: NKIGNVLTAMMRRVLRAAQLHCC*PWNAGW
Trigger: CCAGCCTGCATTCCATGGCCAACAGCAGTGCAGCTG...AGCTGCTCTCAGTACTCTCCTCATCATGGCAGTTAACACATTACCAATTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp CCTGGAATCATCTCCCATATAAACTGCTTGCATTCAGATCTTTGTCTCAAAGTCGTCCCTCACAATTGCTaGGCTCTGGAGAGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PGIISHINCLHSDLCLKVVPHNC*ALERVS
Trigger: GGACACCCTCTCCAGAGCCCAGCAATTGTGAGGGAC...GACTTTGAGACAAAGATCTGAATGCAAGCAGTTTATATGGGAGATGATTCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp AACAAAATTGGTAATGTGTTAACTGCCATGATGAGGAGAGTACTGAGAGCAGCTGAATCCTCCAGCCATTaGGCTTGCCCGGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: NKIGNVLTAMMRRVLRAAESSSH*ACPASA
Trigger: AGCTGAAGCCGGGCAAGCCCAATGGCTGGAGGATTC...AGCTGCTCTCAGTACTCTCCTCATCATGGCAGTTAACACATTACCAATTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp AACAAAATTGGTAATGTGTTAACTGCCATGATGAGGAGAGTACTGAGAGCAGCTCCACAGCCGCCCTCATaGCTGTTGAAGGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: NKIGNVLTAMMRRVLRAAPQPPS*LLKGIL
Trigger: GAGGATTCCCTTCAACAGCCATGAGGGCGGCTGTGG...AGCTGCTCTCAGTACTCTCCTCATCATGGCAGTTAACACATTACCAATTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp TTCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCGTGTCCAGTTGGCTATaGTGTGGGAACCTGAGACCG +
Preference number: 4 (lower is better)
Translates to: FPSWFHFPILISVFPGIIVSSWL*CGNLRP
Trigger: CGGTCTCAGGTTCCCACACCATAGCCAACTGGACAC...GATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGACCTGTTGGGTGGTGGTaGGTCATCCGACCACTCTCG +
Preference number: 4 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGPVGWW*VIRPLS
Trigger: CGAGAGTGGTCGGATGACCCACCACCACCCAACAGG...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGCCTGTTGGGTGGTGGTaGGTCATCCGACCACTCTCG +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLPVGWW*VIRPLS
Trigger: CGAGAGTGGTCGGATGACCCACCACCACCCAACAGG...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp GTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCAAGAGTCATAGTTCTGTaGTTTTCTCAAAAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VLRNALGRGLRWQSANRPRVIVL*FSQKEK
Trigger: CTTCTCCTTTTGAGAAAACCACAGAACTATGACTCT...TGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAGCCGGCTCTCGCCTaGCTGTGGTCAGTGACTCCC +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLEKPALA*LWSVTP
Trigger: GGGAGTCACTGACCACAGCCAGGCGAGAGCCGGCTT...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR TCA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGACGCCCTCATGGCTGTTaGAGGGAATCCTCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGRPHGC*RESSSH
Trigger: ATGGCTGGAGGATTCCCTTCAACAGCCATGAGGGCG...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR TCA 90 bp GTGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTAGGGAAGGTAGGGGCTaGTTCTCCATCCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: VPKGLVISKFPEYKVKTLREGRG*FSIQNP
Trigger: GGGATTTTGGATGGAGAATCAGCCCCTACCTTCCCT...AAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
CDS-3UTR TCA 90 bp CAGGTTTGCTTGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGAGAATCCATCAGAAGTaGACATCACGTCTCCCTAAA +
Preference number: 4 (lower is better)
Translates to: QVCLPFKWDSSEECFRQRRIHQK*TSRLPK
Trigger: TTTAGGGAGACGTGATGTTCACTTCTGATGGATTCT...CCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCAAACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp TCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCTCCCACCGCTTCCAGCTaGAAACCAGGGATTTCACAA +
Preference number: 4 (lower is better)
Translates to: SLPGFISPFSYRYFLESSPTASS*KPGISQ
Trigger: TTGTGAAATCCCTGGTTTTCAGCTGGAAGCGGTGGG...AGATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp TCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCTCTTCTGCAGCTGCACTaGTGTTGGCCATGGAATGCA +
Preference number: 4 (lower is better)
Translates to: SLPGFISPFSYRYFLESSLLQLH*CWPWNA
Trigger: TGCATTCCATGGCCAACAGCAGTGCAGCTGCAGAAG...AGATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp TGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGCTTCTGCAGCTGCACTaGTGTTGGCCATGGAATGCA +
Preference number: 4 (lower is better)
Translates to: CPRDLLSQNSLSTRLRLLLLQLH*CWPWNA
Trigger: TGCATTCCATGGCCAACAGCAGTGCAGCTGCAGAAG...CAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp ATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATAGGAGGCTTCCAGAAGTaGTTCTGCAGCTGCACTGCT +
Preference number: 4 (lower is better)
Translates to: IAEIQLKNPQCKKAIEVIGGFQK*FCSCTA
Trigger: AGCAGTGCAGCTGCAGAAGCACTTCTGGAAGCCTCC...TATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAGCTGCATGGCGTTGTaGACCGAGGCACCACCTGGT +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLESCMAL*TEAPPG
Trigger: ACCAGGTGGTGCCTCGGTGCACAACGCCATGCAGCT...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAATTGCCCGGCTTCAGCTaGATGGCGTTGTGCACCGAG +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLELPGFS*MALCTE
Trigger: CTCGGTGCACAACGCCATGCAGCTGAAGCCGGGCAA...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAACATCGTGCCCACTGCTaGCACCCCAGCCAGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKHRAHC*HPSQSS
Trigger: GCTACTCTGGCTGGGGTGGCAGCAGTGGGCACGATG...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAAATCATGGGGGCATCGTaGCCACTGCTGCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKIMGAS*PLLPPQ
Trigger: CTGGGGTGGCAGCAGTGGGCACGATGCCCCCATGAT...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp TTGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCGAGAAGGTGGCCAAGTaGCTGAACAATCAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LSSLDCRNPAEKSSVQEGEKVAK*LNNQSR
Trigger: CCTGCTTTGATTGTTCAGGCACTTGGCCACCTTCTC...GCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp CAGATATTGTTAGGACCCCACATATGTCCCTCACTGTTCCCATGCCCTTTACAGAGAAGGTGGCAGGACTaGTATCATCAGACCTCATTT +
Preference number: 4 (lower is better)
Translates to: QILLGPHICPSLFPCPLQRRWQD*YHQTSF
Trigger: AAATGAGGTCTGATGATAGCAGTCCTGCCACCTTCT...CTGTAAAGGGCATGGGAACAGTGAGGGACATATGTGGGGTCCTAACAATATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp TCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCTAGTTCCGTCCTGCGCTaGGATTTTCAGACACTAGGC +
Preference number: 4 (lower is better)
Translates to: SLPGFISPFSYRYFLESSSSVLR*DFQTLG
Trigger: GCCTAGTGTCTGAAAATCGCAGCGCAGGACGGAACT...AGATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CCA 90 bp TTCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCACAATTGCTGGGCTCTaGAGAGGGTGTCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: FPSWFHFPILISVFPGIITIAGL*RGCPRS
Trigger: AGACCTTGGACACCCTCTCCAGAGCCCAGCAATTGT...GATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAATCCAAGCCGCCCAGCTaGGCCAACTGCCGGTGTATC +
Preference number: 4 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKSKPPS*ANCRCI
Trigger: GATACACCGGCAGTTGGCCCAGCTGGGCGGCTTGGA...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAATCCAAGCCGCCCAGCTaGGCCAACTGCCGGTGTATC +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTESKPPS*ANCRCI
Trigger: GATACACCGGCAGTTGGCCCAGCTGGGCGGCTTGGA...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAACCGGCTTCAGCTGCATaGCGTTGTGCACCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKPASAA*RCAPRH
Trigger: GTGCCTCGGTGCACAACGCCATGCAGCTGAAGCCGG...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAGAATCCTCCAGCCATTaGGCTTGCCCGGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGESSSH*ACPASA
Trigger: AGCTGAAGCCGGGCAAGCCCAATGGCTGGAGGATTC...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGACCACAGCCGCCCTCATaGCTGTTGAAGGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGPQPPS*LLKGIL
Trigger: GAGGATTCCCTTCAACAGCCATGAGGGCGGCTGTGG...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp GACCAAATGAATGTGACGATGGCATCTCATTTCCCAGGTGGACATGTGCTGGGCGGTAATTTTCCCATTTaGTTTGGAAGTAGGACCAGT +
Preference number: 4 (lower is better)
Translates to: DQMNVTMASHFPGGHVLGGNFPI*FGSRTS
Trigger: ACTGGTCCTACTTCCAAACCAAATGGGAAAATTACC...GCCCAGCACATGTCCACCTGGGAAATGAGATGCCATCGTCACATTCATTTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp CCTGGAATCATCTCCCATATAAACTGCTTGCATTCAGATCTTTGTCTCAAAGTCTGGAAAAAGGCTCGGTaGGCAAGCTCCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PGIISHINCLHSDLCLKVWKKAR*ASSFQE
Trigger: CTCCTGGAAGGAGCTTGCCCACCGAGCCTTTTTCCA...GACTTTGAGACAAAGATCTGAATGCAAGCAGTTTATATGGGAGATGATTCCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp ATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATAAGGCTGGAGAGCCCCTaGAGAAGGAGTAAACGACGA +
Preference number: 4 (lower is better)
Translates to: IAEIQLKNPQCKKAIEVIRLESP*RRSKRR
Trigger: TCGTCGTTTACTCCTTCTCCAGGGGCTCTCCAGCCT...TATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478399.5
3UTR CAA 72 bp AGTACTGAGAGCAGCTCAGAGCAGCATCTCCCAGACTaGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: STESSSEQHLPD*SSLDCRNPAEK
Trigger: TTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAAGTCTGGGAGATGCTGCTCTGAGCTGCTCTCAGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp TTGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCAGCATCTCCCAGACTTaGGTAGCTTGGATTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LSSLDCRNPAEKSSVQEGSISQT*VAWIAE
Trigger: TTCTGCAATCCAAGCTACTCAAGTCTGGGAGATGCT...GCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp TTGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCGCCTGTGATGAAGAGTaGCAATCGGCAAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: LSSLDCRNPAEKSSVQEGACDEE*QSAKQI
Trigger: GATTTGCTTTGCCGATTGTCACTCTTCATCACAGGC...GCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp CCCAGAAGACACACAGCACCACACAACAGGATTGATGTGATGACAAGGCCAAGAAGTCTAACCTCTTTTTaGAATGTGCCTGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: PRRHTAPHNRIDVMTRPRSLTSF*NVPVMK
Trigger: CTTCATCACAGGCACATTTCAAAAAGAGGTTAGACT...TCTTGGCCTTGTCATCACATCAATCCTGTTGTGTGGTGCTGTGTGTCTTCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAACTTGGCCGCGCTGAGTaGGCTAATCTTGGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKLGRAE*ANLGAS
Trigger: GGAGGCTCCAAGATTAGCTCACTCAGCGCGGCCAAG...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAACAGGGCATCTCCAGCTaGACTCAGCACCATAGCAGC +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLEQGISS*TQHHSS
Trigger: GCTGCTATGGTGCTGAGTGCAGCTGGAGATGCCCTG...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAACCCAGCTGGGCCAACTaGCGGTGTATCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTEPSWAN*RCIFSP
Trigger: TGGGGAGAAGATACACCGGCAGTTGGCCCAGCTGGG...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp TGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGTCTGCTGTGGCCAAGTaGATCACTGTGTCGTCACTA +
Preference number: 4 (lower is better)
Translates to: CPRDLLSQNSLSTRLRLLSAVAK*ITVSSL
Trigger: TAGTGACGACACAGTGATGCACTTGGCCACAGCAGA...CAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
CDS-3UTR GCA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAAAGCTGCATGGCGTTGTaGACCGAGGCACCACCTGGT +
Preference number: 4 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKSCMAL*TEAPPG
Trigger: ACCAGGTGGTGCCTCGGTGCACAACGCCATGCAGCT...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAATTGCCCGGCTTCAGCTaGATGGCGTTGTGCACCGAG +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTELPGFS*MALCTE
Trigger: CTCGGTGCACAACGCCATGCAGCTGAAGCCGGGCAA...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAATCCAGCCATTGGGCTTaGCCGGCTTCAGCTGCATGG +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTESSHWA*PASAAW
Trigger: CCATGCAGCTGAAGCCGGGCAAGCCCAATGGCTGGA...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp ATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATATCGGAAGTTCCGTCCTaGGCTGCGATTTTCAGACAC +
Preference number: 4 (lower is better)
Translates to: IAEIQLKNPQCKKAIEVISEVPS*AAIFRH
Trigger: GTGTCTGAAAATCGCAGCGCAGGACGGAACTTCCGA...TATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAACCACAGCCGCCCTCATaGCTGTTGAAGGGAATCCTC +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLEPQPPS*LLKGIL
Trigger: GAGGATTCCCTTCAACAGCCATGAGGGCGGCTGTGG...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp TGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGATCAGTGTGTCCAGTTaGCTATGGTGTGGGAACCTG +
Preference number: 4 (lower is better)
Translates to: CPRDLLSQNSLSTRLRLLISVSS*LWCGNL
Trigger: CAGGTTCCCACACCATAGCCAACTGGACACACTGAT...CAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
CDS-3UTR CCA 90 bp GTGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTCTCTCGATGCTCACTTaGATCAGTGTGTCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: VPKGLVISKFPEYKVKTLLSMLT*ISVSSW
Trigger: CCAACTGGACACACTGATCCAAGTGAGCATCGAGAG...AAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
CDS-3UTR CCA 90 bp TGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGCTCTCGATGCTCACTTaGATCAGTGTGTCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: CPRDLLSQNSLSTRLRLLLSMLT*ISVSSW
Trigger: CCAACTGGACACACTGATCCAAGTGAGCATCGAGAG...CAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
CDS-3UTR CCA 90 bp GTGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTTCCCCACTGCAAGGGTaGTCTGCTATTCACAGCATA +
Preference number: 4 (lower is better)
Translates to: VPKGLVISKFPEYKVKTLSPLQG*SAIHSI
Trigger: TATGCTGTGAATAGCAGACCACCCTTGCAGTGGGGA...AAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
CDS-3UTR CCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGTGGAAAAAGGCTCGGTaGGCAAGCTCCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLWKKAR*ASSFQE
Trigger: CTCCTGGAAGGAGCTTGCCCACCGAGCCTTTTTCCA...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp TTGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCTGCTTGCCCTTCAAATaGGACAGTTCTGAGGAATGC +
Preference number: 4 (lower is better)
Translates to: LSSLDCRNPAEKSSVQEGCLPFK*DSSEEC
Trigger: GCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCA...GCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp TCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCTATCTCATTTCCCAGGTaGACATGTGCTGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SLPGFISPFSYRYFLESSISFPR*TCAGQH
Trigger: ATGCTGCCCAGCACATGTCCACCTGGGAAATGAGAT...AGATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp CAGGTTTGCTTGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGTGTTGTTTACAATTGTaGCTAAAGCCCTGCACTAGA +
Preference number: 4 (lower is better)
Translates to: QVCLPFKWDSSEECFRQRCCLQL*LKPCTR
Trigger: TCTAGTGCAGGGCTTTAGCCACAATTGTAAACAACA...CCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCAAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAACCCTTGCCAGGGTTCTaGGCCCTCACGCATAAAGTG +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLEPLPGF*ALTHKV
Trigger: CACTTTATGCGTGAGGGCCCAGAACCCTGGCAAGGG...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CCA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAAGTGTCTGCTGTAGCCTaGACTGGAACGCGCGAGCGA +
Preference number: 4 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKVSAVA*TGTRER
Trigger: TCGCTCGCGCGTTCCAGTCCAGGCTACAGCAGACAC...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478927.5
CDS-3UTR TCA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAGTGAAGCCTAGGCACTaGGATTCTGGGCTACTAGAC +
Preference number: 4 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGVKPRH*DSGLLD
Trigger: GTCTAGTAGCCCAGAATCTCAGTGCCTAGGCTTCAC...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR GCA 90 bp ATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATATCTGCTGTGGCCAAGTaGATCACTGTGTCGTCACTA +
Preference number: 4 (lower is better)
Translates to: IAEIQLKNPQCKKAIEVISAVAK*ITVSSL
Trigger: TAGTGACGACACAGTGATGCACTTGGCCACAGCAGA...TATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp CCTGGAATCATCTCCCATATAAACTGCTTGCATTCAGATCTTTGTCTCAAAGTCACTGCAAGGGTGGTCTaGTATTCACAGCATAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGIISHINCLHSDLCLKVTARVV*YSQHRL
Trigger: CAGCCTATGCTGTGAATAGCAGACCACCCTTGCAGT...GACTTTGAGACAAAGATCTGAATGCAAGCAGTTTATATGGGAGATGATTCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp TTCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCTTAATGCCTATTGGCTaGCCAAGCACTGTGCTAGGT +
Preference number: 4 (lower is better)
Translates to: FPSWFHFPILISVFPGIILMPIG*PSTVLG
Trigger: ACCTAGCACAGTGCTTGGGCAGCCAATAGGCATTAA...GATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAACAGCTGCACTGCTGTTaGCCATGGAATGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTEQLHCC*PWNAGW
Trigger: CCAGCCTGCATTCCATGGCCAACAGCAGTGCAGCTG...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAAGAATCCTCCAGCCATTaGGCTTGCCCGGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKESSSH*ACPASA
Trigger: AGCTGAAGCCGGGCAAGCCCAATGGCTGGAGGATTC...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAGTGTCCAGTTGGCTATaGTGTGGGAACCTGAGACCG +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLEVSSWL*CGNLRP
Trigger: CGGTCTCAGGTTCCCACACCATAGCCAACTGGACAC...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp TCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCTTGCTTGCCCTTCAAATaGGACAGTTCTGAGGAATGC +
Preference number: 4 (lower is better)
Translates to: SLPGFISPFSYRYFLESSCLPFK*DSSEEC
Trigger: GCATTCCTCAGAACTGTCCCATTTGAAGGGCAAGCA...AGATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAGCAAGCCCACTGGCTaGACTGAGGGTGACCAAATG +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLESKPTG*TEGDQM
Trigger: CATTTGGTCACCCTCAGTCCAGCCAGTGGGCTTGCT...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp TCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCTGCTGAGAGCGAAGTTTaGGGTGGAAGTTTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SLPGFISPFSYRYFLESSAESEV*GGSFEV
Trigger: AACCTCAAAACTTCCACCCCAAACTTCGCTCTCAGC...AGATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAACAATTGCTGGGCTCTaGAGAGGGTGTCTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGTIAGL*RGCLCG
Trigger: CCCACAAAGACACCCTCTCCAGAGCCCAGCAATTGT...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465513.1
CDS-3UTR CCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAGTCCCTCACAATTGCTaGGCTCTGGAGAGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLEVPHNC*ALERVS
Trigger: AGACACCCTCTCCAGAGCCCAGCAATTGTGAGGGAC...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465513.1
ENST00000478927.5
CDS-3UTR TCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAGGGAAGGTAGGGGCTaGTTCTCCATCCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLEREGRG*FSIQNP
Trigger: GGGATTTTGGATGGAGAATCAGCCCCTACCTTCCCT...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGTCTGCTGTGGCCAAGTaGATCACTGTGTCGTCACTA +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLSAVAK*ITVSSL
Trigger: TAGTGACGACACAGTGATGCACTTGGCCACAGCAGA...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGTCCGACCACTCTCGATaGTCACTTGGATCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLSDHSR*SLGSVC
Trigger: ACACACTGATCCAAGTGAGCATCGAGAGTGGTCGGA...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGACTGCAAGGGTGGTCTaGTATTCACAGCATAGGCTG +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLTARVV*YSQHRL
Trigger: CAGCCTATGCTGTGAATAGCAGACCACCCTTGCAGT...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp TCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCTCCCACAGTGGAAACCTaGTCATTAACATACCCCATA +
Preference number: 4 (lower is better)
Translates to: SLPGFISPFSYRYFLESSPTVET*SLTYPI
Trigger: TATGGGGTATGTTAATGAGCAGGTTTCCACTGTGGG...AGATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp CCTGGAATCATCTCCCATATAAACTGCTTGCATTCAGATCTTTGTCTCAAAGTCGACAGTTCTGAGGAATaGTTTAGGCAGAGGACTCAG +
Preference number: 4 (lower is better)
Translates to: PGIISHINCLHSDLCLKVDSSEE*FRQRTQ
Trigger: CTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGTC...GACTTTGAGACAAAGATCTGAATGCAAGCAGTTTATATGGGAGATGATTCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp CCTGGAATCATCTCCCATATAAACTGCTTGCATTCAGATCTTTGTCTCAAAGTCTACCCCAGGTTTGCTTaGCCTTCAAATGGGACAGTT +
Preference number: 4 (lower is better)
Translates to: PGIISHINCLHSDLCLKVYPRFA*PSNGTV
Trigger: AACTGTCCCATTTGAAGGGCAAGCAAACCTGGGGTA...GACTTTGAGACAAAGATCTGAATGCAAGCAGTTTATATGGGAGATGATTCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp CAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATAGATTCAGAGTATTACCCCAGGTTTGCTTaGCCTTCAAATGGGACAGTT +
Preference number: 4 (lower is better)
Translates to: QLKNPQCKKAIEVIDSEYYPRFA*PSNGTV
Trigger: AACTGTCCCATTTGAAGGGCAAGCAAACCTGGGGTA...ATACTCTGAATCTATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAATCTGGAGAGGGTGTCTaGTGTAGCCTGGACTGGAAC +
Preference number: 4 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKSGEGV*CSLDWN
Trigger: GTTCCAGTCCAGGCTACAGCAGACACCCTCTCCAGA...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478927.5
CDS-3UTR CCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGCAAGAGCTTCTGCTGTaGCCAAGTGCATCACTGTGT +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLQELLL*PSASLC
Trigger: ACACAGTGATGCACTTGGCCACAGCAGAAGCTCTTG...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAGTGTCCAGTTGGCTATaGTGTGGGAACCTGAGACCG +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTEVSSWL*CGNLRP
Trigger: CGGTCTCAGGTTCCCACACCATAGCCAACTGGACAC...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGATCAGTGTGTCCAGTTaGCTATGGTGTGGGAACCTG +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLISVSS*LWCGNL
Trigger: CAGGTTCCCACACCATAGCCAACTGGACACACTGAT...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAATCAGTGTGTCCAGTTaGCTATGGTGTGGGAACCTG +
Preference number: 4 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGISVSS*LWCGNL
Trigger: CAGGTTCCCACACCATAGCCAACTGGACACACTGAT...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGCTCTCGATGCTCACTTaGATCAGTGTGTCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLLSMLT*ISVSSW
Trigger: CCAACTGGACACACTGATCCAAGTGAGCATCGAGAG...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGATCCCCACTGCAAGGGTaGTCTGCTATTCACAGCATA +
Preference number: 4 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGSPLQG*SAIHSI
Trigger: TATGCTGTGAATAGCAGACCACCCTTGCAGTGGGGA...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAATGGAAAAAGGCTCGGTaGGCAAGCTCCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKWKKAR*ASSFQE
Trigger: CTCCTGGAAGGAGCTTGCCCACCGAGCCTTTTTCCA...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp GTGGAAACCTGCTCATTAACATACCCCATACTAGCTCTCTTCCCTTCCTGGTTTTCAACCAGTGTCAGATaGAAGTCAGTGGATAAATAC +
Preference number: 4 (lower is better)
Translates to: VETCSLTYPILALFPSWFSTSVR*KSVDKY
Trigger: GTATTTATCCACTGACTTCCATCTGACACTGGTTGA...AAACCAGGAAGGGAAGAGAGCTAGTATGGGGTATGTTAATGAGCAGGTTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAAAGCAAGCCCACTGGCTaGACTGAGGGTGACCAAATG +
Preference number: 4 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKSKPTG*TEGDQM
Trigger: CATTTGGTCACCCTCAGTCCAGCCAGTGGGCTTGCT...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAAGTCCCTCACAATTGCTaGGCTCTGGAGAGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKVPHNC*ALERVS
Trigger: AGACACCCTCTCCAGAGCCCAGCAATTGTGAGGGAC...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465513.1
ENST00000478927.5
CDS-3UTR CCA 90 bp AACAAAATTGGTAATGTGTTAACTGCCATGATGAGGAGAGTACTGAGAGCAGCTAGACACTCTGCTTCTTaGCCTCGGAGGACTAACTTT +
Preference number: 4 (lower is better)
Translates to: NKIGNVLTAMMRRVLRAARHSAS*PRRTNF
Trigger: AAAGTTAGTCCTCCGAGGCCAAGAAGCAGAGTGTCT...AGCTGCTCTCAGTACTCTCCTCATCATGGCAGTTAACACATTACCAATTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR TCA 90 bp ATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATAGCTGACCCTATCAATTaGGCTAAAGGACTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: IAEIQLKNPQCKKAIEVIADPIN*AKGLFS
Trigger: ACTGAAGAGTCCTTTAGCTCAATTGATAGGGTCAGC...TATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAACCCACCGCTTCCAGCTaGAAACCAGGGATTTCACAA +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTEPTASS*KPGISQ
Trigger: TTGTGAAATCCCTGGTTTTCAGCTGGAAGCGGTGGG...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGCCTGTGATGAAGAGTaGCAATCGGCAAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLACDEE*QSAKQI
Trigger: GATTTGCTTTGCCGATTGTCACTCTTCATCACAGGC...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAAAGTGCTTCTGCAGCTaGACTGCTGTTGGCCATGGA +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTEKCFCS*TAVGHG
Trigger: TCCATGGCCAACAGCAGTGCAGCTGCAGAAGCACTT...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAATCCGACCACTCTCGATaGTCACTTGGATCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLESDHSR*SLGSVC
Trigger: ACACACTGATCCAAGTGAGCATCGAGAGTGGTCGGA...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp CCTGGAATCATCTCCCATATAAACTGCTTGCATTCAGATCTTTGTCTCAAAGTCCCCACAGTGGAAACCTaGTCATTAACATACCCCATA +
Preference number: 4 (lower is better)
Translates to: PGIISHINCLHSDLCLKVPTVET*SLTYPI
Trigger: TATGGGGTATGTTAATGAGCAGGTTTCCACTGTGGG...GACTTTGAGACAAAGATCTGAATGCAAGCAGTTTATATGGGAGATGATTCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAACAAGAGCTTCTGCTGTaGCCAAGTGCATCACTGTGT +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLEQELLL*PSASLC
Trigger: ACACAGTGATGCACTTGGCCACAGCAGAAGCTCTTG...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAATCCCCACTGCAAGGGTaGTCTGCTATTCACAGCATA +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLESPLQG*SAIHSI
Trigger: TATGCTGTGAATAGCAGACCACCCTTGCAGTGGGGA...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp GTGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTAAAAGGGATAGATTCTaGAAGAACAGGATGAGCCTG +
Preference number: 4 (lower is better)
Translates to: VPKGLVISKFPEYKVKTLKRDRF*KNRMSL
Trigger: CAGGCTCATCCTGTTCTTCCAGAATCTATCCCTTTT...AAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp TTGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCGAAGACACTAAGGTTTaGTTTGTACAAAGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: LSSLDCRNPAEKSSVQEGEDTKV*FVQRVS
Trigger: GCTTACCCTTTGTACAAACCAAACCTTAGTGTCTTC...GCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp CAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATAGATTCAGAGTATAGAATCCATCAGAAGTaGACATCACGTCTCCCTAAA +
Preference number: 4 (lower is better)
Translates to: QLKNPQCKKAIEVIDSEYRIHQK*TSRLPK
Trigger: TTTAGGGAGACGTGATGTTCACTTCTGATGGATTCT...ATACTCTGAATCTATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAGCATCTCCCAGACTTaGGTAGCTTGGATTGCAGAA +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLESISQT*VAWIAE
Trigger: TTCTGCAATCCAAGCTACTCAAGTCTGGGAGATGCT...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp GTGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGTAATGCTGAGTTTCTaGGCTCACAAAGGATATTTG +
Preference number: 4 (lower is better)
Translates to: VPKGLVISKFPEYKVKTLVMLSF*AHKGYL
Trigger: CAAATATCCTTTGTGAGCTCAGAAACTCAGCATTAC...AAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR GCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAACTGCAAGGGTGGTCTaGTATTCACAGCATAGGCTG +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTETARVV*YSQHRL
Trigger: CAGCCTATGCTGTGAATAGCAGACCACCCTTGCAGT...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAAACTGCAAGGGTGGTCTaGTATTCACAGCATAGGCTG +
Preference number: 4 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKTARVV*YSQHRL
Trigger: CAGCCTATGCTGTGAATAGCAGACCACCCTTGCAGT...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR GCA 90 bp AACAAAATTGGTAATGTGTTAACTGCCATGATGAGGAGAGTACTGAGAGCAGCTAAACTGAGCTTAAGGTaGCCAAGGGACTTGTTATCT +
Preference number: 4 (lower is better)
Translates to: NKIGNVLTAMMRRVLRAAKLSLR*PRDLLS
Trigger: AGATAACAAGTCCCTTGGGCACCTTAAGCTCAGTTT...AGCTGCTCTCAGTACTCTCCTCATCATGGCAGTTAACACATTACCAATTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp TTGAGTAGCTTGGATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCTTGAGTAGCTTGGATTaGAGAAATCCAGCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: LSSLDCRNPAEKSSVQEGLSSLD*RNPAEK
Trigger: TTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA...GCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAACAAGAGCTTCTGCTGTaGCCAAGTGCATCACTGTGT +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTEQELLL*PSASLC
Trigger: ACACAGTGATGCACTTGGCCACAGCAGAAGCTCTTG...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp TCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCTGGTAATTTTCCCATTTaGTTTGGAAGTAGGACCAGT +
Preference number: 4 (lower is better)
Translates to: SLPGFISPFSYRYFLESSGNFPI*FGSRTS
Trigger: ACTGGTCCTACTTCCAAACCAAATGGGAAAATTACC...AGATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp TGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGGAAGACACTAAGGTTTaGTTTGTACAAAGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: CPRDLLSQNSLSTRLRLLEDTKV*FVQRVS
Trigger: GCTTACCCTTTGTACAAACCAAACCTTAGTGTCTTC...CAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp TGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGTGTTGTTTACAATTGTaGCTAAAGCCCTGCACTAGA +
Preference number: 4 (lower is better)
Translates to: CPRDLLSQNSLSTRLRLLCCLQL*LKPCTR
Trigger: TCTAGTGCAGGGCTTTAGCCACAATTGTAAACAACA...CAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAATTCCGTAATTCCTTCTaGCTCCACCCTAATGTGTGC +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLEFRNSF*LHPNVC
Trigger: GCACACATTAGGGTGGAGCCAGAAGGAATTACGGAA...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR TCA 90 bp GTGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTCTCTACAAAGTAGCCTaGTTGGACAATGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: VPKGLVISKFPEYKVKTLLYKVA*LDNVLF
Trigger: AAAAAGTACATTGTCCAATCAGGCTACTTTGTAGAG...AAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
CDS-3UTR TCA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAGAATCCATCAGAAGTaGACATCACGTCTCCCTAAA +
Preference number: 4 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGRIHQK*TSRLPK
Trigger: TTTAGGGAGACGTGATGTTCACTTCTGATGGATTCT...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR TCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGAGAATCCATCAGAAGTaGACATCACGTCTCCCTAAA +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLRIHQK*TSRLPK
Trigger: TTTAGGGAGACGTGATGTTCACTTCTGATGGATTCT...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR TCA 90 bp CCTGGAATCATCTCCCATATAAACTGCTTGCATTCAGATCTTTGTCTCAAAGTCACACTCAATAGATACTaGTTAATGCCTATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PGIISHINCLHSDLCLKVTLNRY*LMPIGC
Trigger: GCAGCCAATAGGCATTAATCAGTATCTATTGAGTGT...GACTTTGAGACAAAGATCTGAATGCAAGCAGTTTATATGGGAGATGATTCCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAACCACACAACAGGATTaGTGTGATGACAAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTETTQQD*CDDKAK
Trigger: CTTGGCCTTGTCATCACATCAATCCTGTTGTGTGGT...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAACTGAGCTTAAGGTaGCCAAGGGACTTGTTATCT +
Preference number: 4 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGKLSLR*PRDLLS
Trigger: AGATAACAAGTCCCTTGGGCACCTTAAGCTCAGTTT...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
CDS-3UTR GCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAGACAGTTCTGAGGAATaGTTTAGGCAGAGGACTCAG +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTEDSSEE*FRQRTQ
Trigger: CTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGTC...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp GTGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTTTGAGTAGCTTGGATTaGAGAAATCCAGCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: VPKGLVISKFPEYKVKTLLSSLD*RNPAEK
Trigger: TTTTTCAGCTGGATTTCTGCAATCCAAGCTACTCAA...AAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAACTCCACCCTAATGTGTaGTTCTGTGAATTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLELHPNV*FCELQA
Trigger: AGCTTGCAATTCACAGAAGCACACATTAGGGTGGAG...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CCA 90 bp AACAAAATTGGTAATGTGTTAACTGCCATGATGAGGAGAGTACTGAGAGCAGCTTCAACCAGTGTCAGATaGAAGTCAGTGGATAAATAC +
Preference number: 4 (lower is better)
Translates to: NKIGNVLTAMMRRVLRAASTSVR*KSVDKY
Trigger: GTATTTATCCACTGACTTCCATCTGACACTGGTTGA...AGCTGCTCTCAGTACTCTCCTCATCATGGCAGTTAACACATTACCAATTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp TCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCTAGAGTCATAGTTCTGTaGTTTTCTCAAAAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SLPGFISPFSYRYFLESSRVIVL*FSQKEK
Trigger: CTTCTCCTTTTGAGAAAACCACAGAACTATGACTCT...AGATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGCCCTCACGCATAAAGTaGGATAATAATATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLPSRIK*DNNICL
Trigger: GAGGCAGATATTATTATCCCACTTTATGCGTGAGGG...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR TCA 90 bp ATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATACTCTACAAAGTAGCCTaGTTGGACAATGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: IAEIQLKNPQCKKAIEVILYKVA*LDNVLF
Trigger: AAAAAGTACATTGTCCAATCAGGCTACTTTGTAGAG...TATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGAGTCTAACCTCTTTTTaGAATGTGCCTGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLSLTSF*NVPVMK
Trigger: CTTCATCACAGGCACATTTCAAAAAGAGGTTAGACT...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR GCA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAGCTTAAGGTaGCCAAGGGACTTGTTATCT +
Preference number: 4 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLEKLSLR*PRDLLS
Trigger: AGATAACAAGTCCCTTGGGCACCTTAAGCTCAGTTT...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
CDS-3UTR GCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAAGAAGGTGGCAGGACTaGTATCATCAGACCTCATTT +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTERRWQD*YHQTSF
Trigger: AAATGAGGTCTGATGATAGCAGTCCTGCCACCTTCT...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGGTAATTTTCCCATTTaGTTTGGAAGTAGGACCAGT +
Preference number: 4 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLGNFPI*FGSRTS
Trigger: ACTGGTCCTACTTCCAAACCAAATGGGAAAATTACC...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp TTCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCCATATCGGTATTTCCTaGAATCATCTCCCATATAAA +
Preference number: 4 (lower is better)
Translates to: FPSWFHFPILISVFPGIIHIGIS*NHLPYK
Trigger: TTTATATGGGAGATGATTCCAGGAAATACCGATATG...GATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
3UTR CAA 72 bp AAGCAGGTTTCACTCAGGAAGCTCTATCTATCTGAGTaGGGTCTTGAAGGACAAGTAAGAATTTATTATCAG +
Preference number: 4 (lower is better)
Translates to: KQVSLRKLYLSE*GLEGQVRIYYQ
Trigger: CTGATAATAAATTCTTACTTGTCCTTCAAGACCCAACTCAGATAGATAGAGCTTCCTGAGTGAAACCTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR TCA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGACTCTACAAAGTAGCCTaGTTGGACAATGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGLYKVA*LDNVLF
Trigger: AAAAAGTACATTGTCCAATCAGGCTACTTTGTAGAG...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CCA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAAGGAAAAACATTCCTATaGGATGAACTAGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKGKTFL*DELEGG
Trigger: GCCACCTTCTAGTTCATCCCATAGGAATGTTTTTCC...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAGGAAAAACATTCCTATaGGATGAACTAGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTEGKTFL*DELEGG
Trigger: GCCACCTTCTAGTTCATCCCATAGGAATGTTTTTCC...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CCA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAGGTAATTTTCCCATTTaGTTTGGAAGTAGGACCAGT +
Preference number: 4 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTEGNFPI*FGSRTS
Trigger: ACTGGTCCTACTTCCAAACCAAATGGGAAAATTACC...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR TCA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAAGTTTATTATTTACAGTaGAGCCTAGGCACTGAGATT +
Preference number: 4 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKVYYLQ*SLGTEI
Trigger: AATCTCAGTGCCTAGGCTTCACTGTAAATAATAAAC...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS CCA 90 bp GGGAGCGCGGGGCCGAGGGCCGGGATCGCGATACCTGCTGTAGCCTaGACTGGAACGCGCGAGCGACGGGCGTGGCGCGGGCTCCCGGGG +
Preference number: 5 (lower is better)
Translates to: GSAGPRAGIAIPAVA*TGTRERRAWRGLPG
Trigger: CCCCGGGAGCCCGCGCCACGCCCGTCGCTCGCGCGTTCCAGTCCAGGCTACAGCAGGTATCGCGATCCCGGCCCTCGGCCCCGCGCTCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS TCA 90 bp AGGGTGGCGGCGAGGGCCCCCGCACCTGCGCTTGGCCGCGCTGAGTaGGCTAATCTTGGAGCCTCCAAGGCGGCTTCCTGGCACCGCCGC +
Preference number: 5 (lower is better)
Translates to: RVAARAPAPALGRAE*ANLGASKAASWHRR
Trigger: GCGGCGGTGCCAGGAAGCCGCCTTGGAGGCTCCAAGATTAGCTCACTCAGCGCGGCCAAGCGCAGGTGCGGGGGCCCTCGCCGCCACCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
ENST00000485496.1
CDS CCA 90 bp GGGACCTCCGTCGCCCGCCCCAAATGCTCTGAAGAGCCCGGAGCCTaGTGCCCGGAATGTGGCGGCACCGGAAAGCCGGCTCTCGCCTGG +
Preference number: 5 (lower is better)
Translates to: GTSVARPKCSEEPGA*CPECGGTGKPALAW
Trigger: CCAGGCGAGAGCCGGCTTTCCGGTGCCGCCACATTCCGGGCACCAGGCTCCGGGCTCTTCAGAGCATTTGGGGCGGGCGACGGAGGTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471850.1
ENST00000478399.5
ENST00000481816.5
CDS CCA 90 bp GGCGGCTTCCTGGCACCGCCGCGCCCTTCTGCACCCAAGCGAGAGTaGACGGGACCTCCGTCGCCCGCCCCAAATGCTCTGAAGAGCCCG +
Preference number: 5 (lower is better)
Translates to: GGFLAPPRPSAPKRE*TGPPSPAPNALKSP
Trigger: CGGGCTCTTCAGAGCATTTGGGGCGGGCGACGGAGGTCCCGTCCACTCTCGCTTGGGTGCAGAAGGGCGCGGCGGTGCCAGGAAGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471850.1
ENST00000478399.5
ENST00000481816.5
ENST00000485496.1
CDS CCA 90 bp GCCTGGTGCCCGGAATGTGGCGGCACCGGAAAGCCGGCTCTCGCCTaGCTGTGGTCAGTGACTCCCGTGTGGCCCCGGCTGACGCCTTCG +
Preference number: 5 (lower is better)
Translates to: AWCPECGGTGKPALA*LWSVTPVWPRLTPS
Trigger: CGAAGGCGTCAGCCGGGGCCACACGGGAGTCACTGACCACAGCCAGGCGAGAGCCGGCTTTCCGGTGCCGCCACATTCCGGGCACCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478399.5
ENST00000481816.5
CDS GCA 90 bp ACCTCCGTCGCCCGCCCCAAATGCTCTGAAGAGCCCGGAGCCTGGTaGCCGGAATGTGGCGGCACCGGAAAGCCGGCTCTCGCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: TSVARPKCSEEPGAW*PECGGTGKPALAWL
Trigger: CAGCCAGGCGAGAGCCGGCTTTCCGGTGCCGCCACATTCCGGGCACCAGGCTCCGGGCTCTTCAGAGCATTTGGGGCGGGCGACGGAGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471850.1
ENST00000478399.5
ENST00000481816.5
CDS GCA 90 bp ATCTTGGAGCCTCCAAGGCGGCTTCCTGGCACCGCCGCGCCCTTCTaGACCCAAGCGAGAGTGGACGGGACCTCCGTCGCCCGCCCCAAA +
Preference number: 5 (lower is better)
Translates to: ILEPPRRLPGTAAPF*TQARVDGTSVARPK
Trigger: TTTGGGGCGGGCGACGGAGGTCCCGTCCACTCTCGCTTGGGTGCAGAAGGGCGCGGCGGTGCCAGGAAGCCGCCTTGGAGGCTCCAAGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471850.1
ENST00000478399.5
ENST00000481816.5
ENST00000485496.1
CDS CCA 90 bp ACCGGAAAGCCGGCTCTCGCCTGGCTGTGGTCAGTGACTCCCGTGTaGCCCCGGCTGACGCCTTCGCCCGTGCTCACGTCCGACTTTGTA +
Preference number: 5 (lower is better)
Translates to: TGKPALAWLWSVTPV*PRLTPSPVLTSDFV
Trigger: TACAAAGTCGGACGTGAGCACGGGCGAAGGCGTCAGCCGGGGCCACACGGGAGTCACTGACCACAGCCAGGCGAGAGCCGGCTTTCCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS TCA 90 bp TGCACATGGCCCGCATGGCAGCCCCACAGCCGCCCTCATGGCTGTTaGAGGGAATCCTCCAGCCATTGGGCTTGCCCGGCTTCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: CTWPAWQPHSRPHGC*RESSSHWACPASAA
Trigger: TGCAGCTGAAGCCGGGCAAGCCCAATGGCTGGAGGATTCCCTTCAACAGCCATGAGGGCGGCTGTGGGGCTGCCATGCGGGCCATGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000485496.1
CDS GCA 90 bp CTGTTGAAGGGAATCCTCCAGCCATTGGGCTTGCCCGGCTTCAGCTaGATGGCGTTGTGCACCGAGGCACCACCTGGTGCCCGCCCATCC +
Preference number: 5 (lower is better)
Translates to: LLKGILQPLGLPGFS*MALCTEAPPGARPS
Trigger: GGATGGGCGGGCACCAGGTGGTGCCTCGGTGCACAACGCCATGCAGCTGAAGCCGGGCAAGCCCAATGGCTGGAGGATTCCCTTCAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
CDS CCA 90 bp AGACCGATGCACATGGCCCGCATGGCAGCCCCACAGCCGCCCTCATaGCTGTTGAAGGGAATCCTCCAGCCATTGGGCTTGCCCGGCTTC +
Preference number: 5 (lower is better)
Translates to: RPMHMARMAAPQPPS*LLKGILQPLGLPGF
Trigger: GAAGCCGGGCAAGCCCAATGGCTGGAGGATTCCCTTCAACAGCCATGAGGGCGGCTGTGGGGCTGCCATGCGGGCCATGTGCATCGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000485496.1
CDS GCA 90 bp CACCTTCCCACGTCTAGGGCATCCAAGCCGCCCAGCTGGGCCAACTaGCGGTGTATCTTCTCCCCATCCTGGAGGAACTCCCACTTCCCA +
Preference number: 5 (lower is better)
Translates to: HLPTSRASKPPSWAN*RCIFSPSWRNSHFP
Trigger: TGGGAAGTGGGAGTTCCTCCAGGATGGGGAGAAGATACACCGGCAGTTGGCCCAGCTGGGCGGCTTGGATGCCCTAGACGTGGGAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
CDS CCA 90 bp TGGAAAGAAACGGGGCGGTTGACACGCTCCCACGATTTGCAAGACTaGGAATCCTCATGGTCGGCCACACTCGGAGAGCGCCAGGGGCGG +
Preference number: 5 (lower is better)
Translates to: WKETGRLTRSHDLQD*ESSWSATLGERQGR
Trigger: CCGCCCCTGGCGCTCTCCGAGTGTGGCCGACCATGAGGATTCCCAGTCTTGCAAATCGTGGGAGCGTGTCAACCGCCCCGTTTCTTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS TCA 90 bp TGCTCACTTGGATCAGTGTGTCCAGTTGGCTATGGTGTGGGAACCTaGGACCGATGCACATGGCCCGCATGGCAGCCCCACAGCCGCCCT +
Preference number: 5 (lower is better)
Translates to: CSLGSVCPVGYGVGT*DRCTWPAWQPHSRP
Trigger: AGGGCGGCTGTGGGGCTGCCATGCGGGCCATGTGCATCGGTCTCAGGTTCCCACACCATAGCCAACTGGACACACTGATCCAAGTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000485496.1
CDS GCA 90 bp CTGTTGAAGGGAATCCTCCAGCCATTGGGCTTGCCCGGCTTCAGCTaGATGGCGTTGTGCACCGAGGCACCACCTGCTGTAGCCTGGACT +
Preference number: 5 (lower is better)
Translates to: LLKGILQPLGLPGFS*MALCTEAPPAVAWT
Trigger: AGTCCAGGCTACAGCAGGTGGTGCCTCGGTGCACAACGCCATGCAGCTGAAGCCGGGCAAGCCCAATGGCTGGAGGATTCCCTTCAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471850.1
ENST00000485496.1
CDS CCA 90 bp CTAACTCTCCACCTTCCCACGTCTAGGGCATCCAAGCCGCCCAGCTaGGCCAACTGCCGGTGTATCTTCTCCCCATCCTGGAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: LTLHLPTSRASKPPS*ANCRCIFSPSWRNS
Trigger: GGAGTTCCTCCAGGATGGGGAGAAGATACACCGGCAGTTGGCCCAGCTGGGCGGCTTGGATGCCCTAGACGTGGGAAGGTGGAGAGTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
CDS TCA 90 bp AGCTGCTTCCGGGCCATGCCCGGCTTTGGAAAGAAACGGGGCGGTTaGCACGCTCCCACGATTTGCAAGACTGGGAATCCTCATGGTCGG +
Preference number: 5 (lower is better)
Translates to: SCFRAMPGFGKKRGG*HAPTICKTGNPHGR
Trigger: CCGACCATGAGGATTCCCAGTCTTGCAAATCGTGGGAGCGTGTCAACCGCCCCGTTTCTTTCCAAAGCCGGGCATGGCCCGGAAGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CAA 90 bp GACCAAATGAATGTGACGATGGCATCTCATTTCCCAGGTGGACATGTGCTGGGCGCCGGGGAAGAGGCCTaGGCTGCTGCGGGTGGACGA +
Preference number: 5 (lower is better)
Translates to: DQMNVTMASHFPGGHVLGAGEEA*AAAGGR
Trigger: TCGTCCACCCGCAGCAGCCAAGGCCTCTTCCCCGGC...GCCCAGCACATGTCCACCTGGGAAATGAGATGCCATCGTCACATTCATTTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp GCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAACCTGCTCATTCTCCAGCCATTGGGCTaGCCCGGCTTCAGCTGCATG +
Preference number: 5 (lower is better)
Translates to: AEDSDGRVPTAHSGNLLILQPLG*PGFSCM
Trigger: CATGCAGCTGAAGCCGGGCAAGCCCAATGGCTGGAG...AATGAGCAGGTTTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS CCA 90 bp CAAGTCAGGAGGCTTCCAGAAGTGCTTCTGCAGCTGCACTGCTGTTaGCCATGGAATGCAGGCTGGAGAGCCCCTGCTGTAGCCTGGACT +
Preference number: 5 (lower is better)
Translates to: QVRRLPEVLLQLHCC*PWNAGWRAPAVAWT
Trigger: AGTCCAGGCTACAGCAGGGGCTCTCCAGCCTGCATTCCATGGCCAACAGCAGTGCAGCTGCAGAAGCACTTCTGGAAGCCTCCTGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357003.7
CDS CCA 90 bp CGACCACTCTCGATGCTCACTTGGATCAGTGTGTCCAGTTGGCTATaGTGTGGGAACCTGAGACCGATGCACATGGCCCGCATGGCAGCC +
Preference number: 5 (lower is better)
Translates to: RPLSMLTWISVSSWL*CGNLRPMHMARMAA
Trigger: GGCTGCCATGCGGGCCATGTGCATCGGTCTCAGGTTCCCACACCATAGCCAACTGGACACACTGATCCAAGTGAGCATCGAGAGTGGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000485496.1
CDS CCA 90 bp ACACCCGGGACAGCGGTTTGCCCATCTGTAAACTGGAGGGGGAAGTaGGGAGGTATAGGCTCTCGGAAGTTCCGTCCTGCGCTGCGATTT +
Preference number: 5 (lower is better)
Translates to: TPGTAVCPSVNWRGK*GGIGSRKFRPALRF
Trigger: AAATCGCAGCGCAGGACGGAACTTCCGAGAGCCTATACCTCCCCACTTCCCCCTCCAGTTTACAGATGGGCAAACCGCTGTCCCGGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CAA 90 bp GCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAACCTGCTCATTTTCAGCTGCATGGCGTaGTGCACCGAGGCACCACCT +
Preference number: 5 (lower is better)
Translates to: AEDSDGRVPTAHSGNLLIFSCMA*CTEAPP
Trigger: AGGTGGTGCCTCGGTGCACAACGCCATGCAGCTGAA...AATGAGCAGGTTTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS GCA 90 bp CTAGTTCAAGTCAGGAGGCTTCCAGAAGTGCTTCTGCAGCTGCACTaGTGTTGGCCATGGAATGCAGGCTGGAGAGCCCCTGCTGTAGCC +
Preference number: 5 (lower is better)
Translates to: LVQVRRLPEVLLQLH*CWPWNAGWRAPAVA
Trigger: GGCTACAGCAGGGGCTCTCCAGCCTGCATTCCATGGCCAACAGCAGTGCAGCTGCAGAAGCACTTCTGGAAGCCTCCTGACTTGAACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357003.7
CDS CCA 90 bp GCAGCTGCACTGCTGTTGGCCATGGAATGCAGGCTGGAGAGCCCCTaGAGAAGGAGTAAACGACGAAGATGGATGCGTTCCACTACCCAG +
Preference number: 5 (lower is better)
Translates to: AAALLLAMECRLESP*RRSKRRRWMRSTTQ
Trigger: CTGGGTAGTGGAACGCATCCATCTTCGTCGTTTACTCCTTCTCCAGGGGCTCTCCAGCCTGCATTCCATGGCCAACAGCAGTGCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478399.5
ENST00000481816.5
CDS GCA 90 bp GCTTCCAGAAGTGCTTCTGCAGCTGCACTGCTGTTGGCCATGGAATaGAGGCTGGAGAGCCCCTGGAGAAGGAGTAAACGACGAAGATGG +
Preference number: 5 (lower is better)
Translates to: ASRSASAAALLLAME*RLESPWRRSKRRRW
Trigger: CCATCTTCGTCGTTTACTCCTTCTCCAGGGGCTCTCCAGCCTGCATTCCATGGCCAACAGCAGTGCAGCTGCAGAAGCACTTCTGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478399.5
ENST00000481816.5
CDS GCA 90 bp CTAGTTCAAGTCAGGAGGCTTCCAGAAGTGCTTCTGCAGCTGCACTaGTGTTGGCCATGGAATGCAGGCTGGAGAGCCCCTGGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: LVQVRRLPEVLLQLH*CWPWNAGWRAPGEG
Trigger: TCCTTCTCCAGGGGCTCTCCAGCCTGCATTCCATGGCCAACAGCAGTGCAGCTGCAGAAGCACTTCTGGAAGCCTCCTGACTTGAACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478399.5
ENST00000481816.5
CDS CCA 90 bp GTCATCCGACCACTCTCGATGCTCACTTGGATCAGTGTGTCCAGTTaGCTATGGTGTGGGAACCTGAGACCGATGCACATGGCCCGCATG +
Preference number: 5 (lower is better)
Translates to: VIRPLSMLTWISVSS*LWCGNLRPMHMARM
Trigger: CATGCGGGCCATGTGCATCGGTCTCAGGTTCCCACACCATAGCCAACTGGACACACTGATCCAAGTGAGCATCGAGAGTGGTCGGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000485496.1
CDS CCA 90 bp CAAGTCAGGAGGCTTCCAGAAGTGCTTCTGCAGCTGCACTGCTGTTaGCCATGGAATGCAGGCTGGAGAGCCCCTGGAGAAGGAGTAAAC +
Preference number: 5 (lower is better)
Translates to: QVRRLPEVLLQLHCC*PWNAGWRAPGEGVN
Trigger: GTTTACTCCTTCTCCAGGGGCTCTCCAGCCTGCATTCCATGGCCAACAGCAGTGCAGCTGCAGAAGCACTTCTGGAAGCCTCCTGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478399.5
ENST00000481816.5
CDS-3UTR CAA 90 bp CCCAGAAGACACACAGCACCACACAACAGGATTGATGTGATGACAAGGCCAAGACCCCCAGGTAGCCTGTaGGGTGGTGGTGGGTCATCC +
Preference number: 5 (lower is better)
Translates to: PRRHTAPHNRIDVMTRPRPPGSL*GGGGSS
Trigger: GGATGACCCACCACCACCCAACAGGCTACCTGGGGG...TCTTGGCCTTGTCATCACATCAATCCTGTTGTGTGGTGCTGTGTGTCTTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp GTGGAAACCTGCTCATTAACATACCCCATACTAGCTCTCTTCCCTTCCTGGTTTCCCCCGCACCTGCGCTaGGCCGCGCTGAGTGAGCTA +
Preference number: 5 (lower is better)
Translates to: VETCSLTYPILALFPSWFPPHLR*AALSEL
Trigger: TAGCTCACTCAGCGCGGCCAAGCGCAGGTGCGGGGG...AAACCAGGAAGGGAAGAGAGCTAGTATGGGGTATGTTAATGAGCAGGTTTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS CCA 90 bp GAAGTGCTTCTGCAGCTGCACTGCTGTTGGCCATGGAATGCAGGCTaGAGAGCCCCTGGAGAAGGAGTAAACGACGAAGATGGATGCGTT +
Preference number: 5 (lower is better)
Translates to: EVLLQLHCCWPWNAG*RAPGEGVNDEDGCV
Trigger: AACGCATCCATCTTCGTCGTTTACTCCTTCTCCAGGGGCTCTCCAGCCTGCATTCCATGGCCAACAGCAGTGCAGCTGCAGAAGCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478399.5
ENST00000481816.5
CDS CCA 90 bp TCAGAACTAAGATCTGATCAGCTGCTTCCGGGCCATGCCCGGCTTTaGAAAGAAACGGGGCGGTTGACACGCTCCCACGATTTGCAAGAC +
Preference number: 5 (lower is better)
Translates to: SELRSDQLLPGHARL*KETGRLTRSHDLQD
Trigger: GTCTTGCAAATCGTGGGAGCGTGTCAACCGCCCCGTTTCTTTCCAAAGCCGGGCATGGCCCGGAAGCAGCTGATCAGATCTTAGTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CAA 90 bp GACCAAATGAATGTGACGATGGCATCTCATTTCCCAGGTGGACATGTGCTGGGCCCGCCCTCATGGCTGTaGAAGGGAATCCTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: DQMNVTMASHFPGGHVLGPPSWL*KGILQP
Trigger: TGGCTGGAGGATTCCCTTCAACAGCCATGAGGGCGG...GCCCAGCACATGTCCACCTGGGAAATGAGATGCCATCGTCACATTCATTTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp GAATGCTTTAGGCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAAAAGAAACGGGGCGGTaGACACGCTCCCACGATTTG +
Preference number: 5 (lower is better)
Translates to: ECFRQRTQMAECQPPTVEKETGR*TRSHDL
Trigger: CAAATCGTGGGAGCGTGTCAACCGCCCCGTTTCTTT...TTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGCCTAAAGCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CAA 90 bp GCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAACCTGCTCATTGTGTGCTTCTGTGAATaGCAAGCTGGGATGGGGGAA +
Preference number: 5 (lower is better)
Translates to: AEDSDGRVPTAHSGNLLIVCFCE*QAGMGE
Trigger: TTCCCCCATCCCAGCTTGCAATTCACAGAAGCACAC...AATGAGCAGGTTTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS GCA 90 bp TTAGGGGCTTTCCCAGCTTCCACAAGAGCTTCTGCTGTGGCCAAGTaGATCACTGTGTCGTCACTAACTCTCCACCTTCCCACGTCTAGG +
Preference number: 5 (lower is better)
Translates to: LGAFPASTRASAVAK*ITVSSLTLHLPTSR
Trigger: CCTAGACGTGGGAAGGTGGAGAGTTAGTGACGACACAGTGATGCACTTGGCCACAGCAGAAGCTCTTGTGGAAGCTGGGAAAGCCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
CDS-3UTR CAA 90 bp GAAGGTGGCCAAGTGCCTGAACAATCAAAGCAGGTTTCACTCAGGAAGCTCTATCTCCAGCCATTGGGCTaGCCCGGCTTCAGCTGCATG +
Preference number: 5 (lower is better)
Translates to: EGGQVPEQSKQVSLRKLYLQPLG*PGFSCM
Trigger: CATGCAGCTGAAGCCGGGCAAGCCCAATGGCTGGAG...ATAGAGCTTCCTGAGTGAAACCTGCTTTGATTGTTCAGGCACTTGGCCACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp CCTGGAATCATCTCCCATATAAACTGCTTGCATTCAGATCTTTGTCTCAAAGTCGCCGGGGAAGAGGCCTaGGCTGCTGCGGGTGGACGA +
Preference number: 5 (lower is better)
Translates to: PGIISHINCLHSDLCLKVAGEEA*AAAGGR
Trigger: TCGTCCACCCGCAGCAGCCAAGGCCTCTTCCCCGGC...GACTTTGAGACAAAGATCTGAATGCAAGCAGTTTATATGGGAGATGATTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp GTGGAAACCTGCTCATTAACATACCCCATACTAGCTCTCTTCCCTTCCTGGTTTGGAATCCTCCAGCCATaGGGCTTGCCCGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: VETCSLTYPILALFPSWFGILQP*GLPGFS
Trigger: GCTGAAGCCGGGCAAGCCCAATGGCTGGAGGATTCC...AAACCAGGAAGGGAAGAGAGCTAGTATGGGGTATGTTAATGAGCAGGTTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS GCA 90 bp CAGTTGAGTCAACTTAGGGGCTTTCCCAGCTTCCACAAGAGCTTCTaGTGTGGCCAAGTGCATCACTGTGTCGTCACTAACTCTCCACCT +
Preference number: 5 (lower is better)
Translates to: QLSQLRGFPSFHKSF*CGQVHHCVVTNSPP
Trigger: AGGTGGAGAGTTAGTGACGACACAGTGATGCACTTGGCCACAGCAGAAGCTCTTGTGGAAGCTGGGAAAGCCCCTAAGTTGACTCAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
CDS CCA 90 bp GAATGCAGGCTGGAGAGCCCCTGGAGAAGGAGTAAACGACGAAGATaGATGCGTTCCACTACCCAGTTACTGGTAATGCTGAGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: ECRLESPWRRSKRRR*MRSTTQLLVMLSFC
Trigger: GCAGAAACTCAGCATTACCAGTAACTGGGTAGTGGAACGCATCCATCTTCGTCGTTTACTCCTTCTCCAGGGGCTCTCCAGCCTGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481816.5
CDS-3UTR CAA 90 bp TGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGCCCCCAGGTAGCCTGTaGGGTGGTGGTGGGTCATCC +
Preference number: 5 (lower is better)
Translates to: CPRDLLSQNSLSTRLRLLPPGSL*GGGGSS
Trigger: GGATGACCCACCACCACCCAACAGGCTACCTGGGGG...CAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
CDS-3UTR CAA 90 bp GCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAACCTGCTCATTTCCTGTTGTTTACAATaGTGGCTAAAGCCCTGCACT +
Preference number: 5 (lower is better)
Translates to: AEDSDGRVPTAHSGNLLISCCLQ*WLKPCT
Trigger: AGTGCAGGGCTTTAGCCACAATTGTAAACAACAGGA...AATGAGCAGGTTTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp GCAGAGGACTCAGATGGCAGAGTGCCAACCGCCCACAGTGGAAACCTGCTCATTAAAGACTGGAAGGACTaGGAAAAACATTCCTATGGG +
Preference number: 5 (lower is better)
Translates to: AEDSDGRVPTAHSGNLLIKDWKD*EKHSYG
Trigger: CCCATAGGAATGTTTTTCCAAGTCCTTCCAGTCTTT...AATGAGCAGGTTTCCACTGTGGGCGGTTGGCACTCTGCCATCTGAGTCCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp GAAGGTGGCCAAGTGCCTGAACAATCAAAGCAGGTTTCACTCAGGAAGCTCTATGGTGTGCCCAGATGCTaGAAGAGCGTACTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: EGGQVPEQSKQVSLRKLYGVPRC*KSVLSV
Trigger: CACACTCAGTACGCTCTTCAAGCATCTGGGCACACC...ATAGAGCTTCCTGAGTGAAACCTGCTTTGATTGTTCAGGCACTTGGCCACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CAA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAGCCGGGGAAGAGGCCTaGGCTGCTGCGGGTGGACGA +
Preference number: 5 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTEAGEEA*AAAGGR
Trigger: TCGTCCACCCGCAGCAGCCAAGGCCTCTTCCCCGGC...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CAA 90 bp GTGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGCAGCTGCACTGCTGTaGGCCATGGAATGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: VPKGLVISKFPEYKVKTLAAALL*AMECRL
Trigger: CAGCCTGCATTCCATGGCCAACAGCAGTGCAGCTGC...AAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp CAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATAGATTCAGAGTATGGAATCCTCCAGCCATaGGGCTTGCCCGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: QLKNPQCKKAIEVIDSEYGILQP*GLPGFS
Trigger: GCTGAAGCCGGGCAAGCCCAATGGCTGGAGGATTCC...ATACTCTGAATCTATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp TGCCCTTCAAATGGGACAGTTCTGAGGAATGCTTTAGGCAGAGGACTCAGATGGCAGCATCTCCCAGACTaGAGTAGCTTGGATTGCAGA +
Preference number: 5 (lower is better)
Translates to: CPSNGTVLRNALGRGLRWQHLPD*SSLDCR
Trigger: TCTGCAATCCAAGCTACTCAAGTCTGGGAGATGCTG...CCATCTGAGTCCTCTGCCTAAAGCATTCCTCAGAACTGTCCCATTTGAAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAACCCCCGCACCTGCGCTaGGCCGCGCTGAGTGAGCTA +
Preference number: 5 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTEPPHLR*AALSEL
Trigger: TAGCTCACTCAGCGCGGCCAAGCGCAGGTGCGGGGG...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000478399.5
ENST00000478927.5
CDS CCA 90 bp TACCCTCCCTCTCAATGTCCTCATTGTCCTTTCCGTAATTCCTTCTaGCTCCACCCTAATGTGTGCTTCTGTGAATTGCAAGCTGGGATG +
Preference number: 5 (lower is better)
Translates to: YPPSQCPHCPFRNSF*LHPNVCFCELQAGM
Trigger: CATCCCAGCTTGCAATTCACAGAAGCACACATTAGGGTGGAGCCAGAAGGAATTACGGAAAGGACAATGAGGACATTGAGAGGGAGGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CAA 90 bp AACAAAATTGGTAATGTGTTAACTGCCATGATGAGGAGAGTACTGAGAGCAGCTGCAGCTGCACTGCTGTaGGCCATGGAATGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: NKIGNVLTAMMRRVLRAAAAALL*AMECRL
Trigger: CAGCCTGCATTCCATGGCCAACAGCAGTGCAGCTGC...AGCTGCTCTCAGTACTCTCCTCATCATGGCAGTTAACACATTACCAATTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp ATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATATTCAGCTGCATGGCGTaGTGCACCGAGGCACCACCT +
Preference number: 5 (lower is better)
Translates to: IAEIQLKNPQCKKAIEVIFSCMA*CTEAPP
Trigger: AGGTGGTGCCTCGGTGCACAACGCCATGCAGCTGAA...TATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGGAATCCTCCAGCCATaGGGCTTGCCCGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLGILQP*GLPGFS
Trigger: GCTGAAGCCGGGCAAGCCCAATGGCTGGAGGATTCC...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CAA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAACTGAGTGTGCCGCCCTaGCCAGGGTTCTGGGCCCTC +
Preference number: 5 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTELSVPP*PGFWAL
Trigger: GAGGGCCCAGAACCCTGGCAAGGGCGGCACACTCAG...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CAA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGGGCCATGCCCGGCTTaGGAAAGAAACGGGGCGGTT +
Preference number: 5 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLGPCPA*ERNGAV
Trigger: AACCGCCCCGTTTCTTTCCAAAGCCGGGCATGGCCC...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CAA 90 bp TCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCTACCCGGGACAGCGGTTaGCCCATCTGTAAACTGGAG +
Preference number: 5 (lower is better)
Translates to: SLPGFISPFSYRYFLESSTRDSG*PICKLE
Trigger: CTCCAGTTTACAGATGGGCAAACCGCTGTCCCGGGT...AGATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CAA 90 bp GTGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTATCAGTCCCTCACAATaGCTGGGCTCTGGAGAGGGT +
Preference number: 5 (lower is better)
Translates to: VPKGLVISKFPEYKVKTLISPSQ*LGSGEG
Trigger: ACCCTCTCCAGAGCCCAGCAATTGTGAGGGACTGAT...AAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
CDS-3UTR CAA 90 bp GACCAAATGAATGTGACGATGGCATCTCATTTCCCAGGTGGACATGTGCTGGGCAAGGAGGTAATACAGTaGAGTCAACTTAGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: DQMNVTMASHFPGGHVLGKEVIQ*SQLRGF
Trigger: AAAGCCCCTAAGTTGACTCAACTGTATTACCTCCTT...GCCCAGCACATGTCCACCTGGGAAATGAGATGCCATCGTCACATTCATTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAACCCCCAGGTAGCCTGTaGGGTGGTGGTGGGTCATCC +
Preference number: 5 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKPPGSL*GGGGSS
Trigger: GGATGACCCACCACCACCCAACAGGCTACCTGGGGG...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CAA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAACCCCCAGGTAGCCTGTaGGGTGGTGGTGGGTCATCC +
Preference number: 5 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTEPPGSL*GGGGSS
Trigger: GGATGACCCACCACCACCCAACAGGCTACCTGGGGG...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CAA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAATTCAGCTGCATGGCGTaGTGCACCGAGGCACCACCT +
Preference number: 5 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLEFSCMA*CTEAPP
Trigger: AGGTGGTGCCTCGGTGCACAACGCCATGCAGCTGAA...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CAA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAACTCCAGCCATTGGGCTaGCCCGGCTTCAGCTGCATG +
Preference number: 5 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTELQPLG*PGFSCM
Trigger: CATGCAGCTGAAGCCGGGCAAGCCCAATGGCTGGAG...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CAA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAACTCCAGCCATTGGGCTaGCCCGGCTTCAGCTGCATG +
Preference number: 5 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKLQPLG*PGFSCM
Trigger: CATGCAGCTGAAGCCGGGCAAGCCCAATGGCTGGAG...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CAA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAAGGAATCCTCCAGCCATaGGGCTTGCCCGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKGILQP*GLPGFS
Trigger: GCTGAAGCCGGGCAAGCCCAATGGCTGGAGGATTCC...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CAA 90 bp TCCCTTCCTGGTTTCATTTCCCCATTCTCATATCGGTATTTCCTGGAATCATCTGATCAGTGTGTCCAGTaGGCTATGGTGTGGGAACCT +
Preference number: 5 (lower is better)
Translates to: SLPGFISPFSYRYFLESSDQCVQ*AMVWEP
Trigger: AGGTTCCCACACCATAGCCAACTGGACACACTGATC...AGATGATTCCAGGAAATACCGATATGAGAATGGGGAAATGAAACCAGGAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAATCAGTCCCTCACAATaGCTGGGCTCTGGAGAGGGT +
Preference number: 5 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGISPSQ*LGSGEG
Trigger: ACCCTCTCCAGAGCCCAGCAATTGTGAGGGACTGAT...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CAA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAATTCAGCTGCATGGCGTaGTGCACCGAGGCACCACCT +
Preference number: 5 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTEFSCMA*CTEAPP
Trigger: AGGTGGTGCCTCGGTGCACAACGCCATGCAGCTGAA...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CAA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAACCGCCCTCATGGCTGTaGAAGGGAATCCTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKPPSWL*KGILQP
Trigger: TGGCTGGAGGATTCCCTTCAACAGCCATGAGGGCGG...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CAA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAACCGCCCTCATGGCTGTaGAAGGGAATCCTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTEPPSWL*KGILQP
Trigger: TGGCTGGAGGATTCCCTTCAACAGCCATGAGGGCGG...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CAA 90 bp ATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATAGATCAGTGTGTCCAGTaGGCTATGGTGTGGGAACCT +
Preference number: 5 (lower is better)
Translates to: IAEIQLKNPQCKKAIEVIDQCVQ*AMVWEP
Trigger: AGGTTCCCACACCATAGCCAACTGGACACACTGATC...TATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp CAGATATTGTTAGGACCCCACATATGTCCCTCACTGTTCCCATGCCCTTTACAGCTCTATCTATCTGAGTaGGGTCTTGAAGGACAAGTA +
Preference number: 5 (lower is better)
Translates to: QILLGPHICPSLFPCPLQLYLSE*GLEGQV
Trigger: TACTTGTCCTTCAAGACCCAACTCAGATAGATAGAG...CTGTAAAGGGCATGGGAACAGTGAGGGACATATGTGGGGTCCTAACAATATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp TGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGGTCTTCCATGCAGTCTaGGTAATGCTTAGCAAGGAG +
Preference number: 5 (lower is better)
Translates to: CPRDLLSQNSLSTRLRLLVFHAV*VMLSKE
Trigger: CTCCTTGCTAAGCATTACCAAGACTGCATGGAAGAC...CAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
CDS-3UTR CAA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAGATCAGTGTGTCCAGTaGGCTATGGTGTGGGAACCT +
Preference number: 5 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGDQCVQ*AMVWEP
Trigger: AGGTTCCCACACCATAGCCAACTGGACACACTGATC...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CAA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGATCAGTGTGTCCAGTaGGCTATGGTGTGGGAACCT +
Preference number: 5 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLDQCVQ*AMVWEP
Trigger: AGGTTCCCACACCATAGCCAACTGGACACACTGATC...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CAA 90 bp AACAAAATTGGTAATGTGTTAACTGCCATGATGAGGAGAGTACTGAGAGCAGCTCAGCATCTCCCAGACTaGAGTAGCTTGGATTGCAGA +
Preference number: 5 (lower is better)
Translates to: NKIGNVLTAMMRRVLRAAQHLPD*SSLDCR
Trigger: TCTGCAATCCAAGCTACTCAAGTCTGGGAGATGCTG...AGCTGCTCTCAGTACTCTCCTCATCATGGCAGTTAACACATTACCAATTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp TCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAAAATCAGTCCCTCACAATaGCTGGGCTCTGGAGAGGGT +
Preference number: 5 (lower is better)
Translates to: SQNSLSTRLRLLTLEKLKISPSQ*LGSGEG
Trigger: ACCCTCTCCAGAGCCCAGCAATTGTGAGGGACTGAT...TTTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CAA 90 bp AACAAAATTGGTAATGTGTTAACTGCCATGATGAGGAGAGTACTGAGAGCAGCTGTCTTCCATGCAGTCTaGGTAATGCTTAGCAAGGAG +
Preference number: 5 (lower is better)
Translates to: NKIGNVLTAMMRRVLRAAVFHAV*VMLSKE
Trigger: CTCCTTGCTAAGCATTACCAAGACTGCATGGAAGAC...AGCTGCTCTCAGTACTCTCCTCATCATGGCAGTTAACACATTACCAATTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp CAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATAGATTCAGAGTATGTCTCAAAGTCCACTTaGTGGGAACCCAACTTGAGA +
Preference number: 5 (lower is better)
Translates to: QLKNPQCKKAIEVIDSEYVSKST*WEPNLR
Trigger: TCTCAAGTTGGGTTCCCACAAAGTGGACTTTGAGAC...ATACTCTGAATCTATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp ATTGCAGAAATCCAGCTGAAAAATCCTCAGTGCAAGAAGGCAATAGAGGTGATAGTCTCAAAGTCCACTTaGTGGGAACCCAACTTGAGA +
Preference number: 5 (lower is better)
Translates to: IAEIQLKNPQCKKAIEVIVSKST*WEPNLR
Trigger: TCTCAAGTTGGGTTCCCACAAAGTGGACTTTGAGAC...TATCACCTCTATTGCCTTCTTGCACTGAGGATTTTTCAGCTGGATTTCTGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAACACGCTCCCACGATTaGCAAGACTGGGAATCCTCA +
Preference number: 5 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLETRSHD*QDWESS
Trigger: TGAGGATTCCCAGTCTTGCAAATCGTGGGAGCGTGT...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CAA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGTCTTCCATGCAGTCTaGGTAATGCTTAGCAAGGAG +
Preference number: 5 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLVFHAV*VMLSKE
Trigger: CTCCTTGCTAAGCATTACCAAGACTGCATGGAAGAC...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CAA 90 bp GTGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTCTCTATCTATCTGAGTaGGGTCTTGAAGGACAAGTA +
Preference number: 5 (lower is better)
Translates to: VPKGLVISKFPEYKVKTLLYLSE*GLEGQV
Trigger: TACTTGTCCTTCAAGACCCAACTCAGATAGATAGAG...AAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp CCTGGAATCATCTCCCATATAAACTGCTTGCATTCAGATCTTTGTCTCAAAGTCTCCTGTTGTTTACAATaGTGGCTAAAGCCCTGCACT +
Preference number: 5 (lower is better)
Translates to: PGIISHINCLHSDLCLKVSCCLQ*WLKPCT
Trigger: AGTGCAGGGCTTTAGCCACAATTGTAAACAACAGGA...GACTTTGAGACAAAGATCTGAATGCAAGCAGTTTATATGGGAGATGATTCCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp CCTGGAATCATCTCCCATATAAACTGCTTGCATTCAGATCTTTGTCTCAAAGTCAAGGAGGTAATACAGTaGAGTCAACTTAGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: PGIISHINCLHSDLCLKVKEVIQ*SQLRGF
Trigger: AAAGCCCCTAAGTTGACTCAACTGTATTACCTCCTT...GACTTTGAGACAAAGATCTGAATGCAAGCAGTTTATATGGGAGATGATTCCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAGTCTTCCATGCAGTCTaGGTAATGCTTAGCAAGGAG +
Preference number: 5 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLEVFHAV*VMLSKE
Trigger: CTCCTTGCTAAGCATTACCAAGACTGCATGGAAGAC...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS GCA 90 bp TGCCAGGGTTCTGGGCCCTCACGCATAAAGTGGGATAATAATATCTaGCTCTTAGAATGGTTGTTAAGGATTCAGTTAGTTAATTTTAAC +
Preference number: 5 (lower is better)
Translates to: CQGSGPSRIKWDNNI*LLEWLLRIQLVNFN
Trigger: GTTAAAATTAACTAACTGAATCCTTAACAACCATTCTAAGAGGCAGATATTATTATCCCACTTTATGCGTGAGGGCCCAGAACCCTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CAA 90 bp AGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGAAGGAGGTAATACAGTaGAGTCAACTTAGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: RDLLSQNSLSTRLRLLTLKEVIQ*SQLRGF
Trigger: AAAGCCCCTAAGTTGACTCAACTGTATTACCTCCTT...CAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
CDS-3UTR CAA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAACCAGACTTGAGTAGCTaGGATTGCAGAAATCCAGCT +
Preference number: 5 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTEPDLSS*DCRNPA
Trigger: AGCTGGATTTCTGCAATCCAAGCTACTCAAGTCTGG...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp GGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAGACTGGAAGGACTaGGAAAAACATTCCTATGGG +
Preference number: 5 (lower is better)
Translates to: GLVISKFPEYKVKTLDFGKDWKD*EKHSYG
Trigger: CCCATAGGAATGTTTTTCCAAGTCCTTCCAGTCTTT...TCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp GTGCCCAAGGGACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTTGCCTCTTAGAATGGTaGTTAAGGATTCAGTTAGTT +
Preference number: 5 (lower is better)
Translates to: VPKGLVISKFPEYKVKTLCLLEW*LRIQLV
Trigger: AACTAACTGAATCCTTAACAACCATTCTAAGAGGCA...AAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTCCCTTGGGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS-3UTR CAA 90 bp GACTTGTTATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAATCAGGTAGACAAGGATaGGGAAGAGCATCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: DLLSQNSLSTRLRLLTLESGRQG*GRASRN
Trigger: ATTTCTTGATGCTCTTCCCAATCCTTGTCTACCTGA...TTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGATAACAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS-3UTR CAA 90 bp ATCTCAAAATTCCCTGAGTACAAGGTTAAGACTCTTGACTTTGGAAAAACTGAATCAGGTAGACAAGGATaGGGAAGAGCATCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: ISKFPEYKVKTLDFGKTESGRQG*GRASRN
Trigger: ATTTCTTGATGCTCTTCCCAATCCTTGTCTACCTGA...TTCAGTTTTTCCAAAGTCAAGAGTCTTAACCTTGTACTCAGGGAATTTTGAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357003.7
ENST00000478399.5
CDS GCA 72 bp GGGGAGCGCGGGGCCGAGGGCCGGGATCGCGATACCTaGTGTAGCCTGGACTGGAACGCGCGAGCGACGGGC +
Preference number: 6 (lower is better)
Translates to: GERGAEGRDRDT*CSLDWNARATG
Trigger: GCCCGTCGCTCGCGCGTTCCAGTCCAGGCTACAGCAGGTATCGCGATCCCGGCCCTCGGCCCCGCGCTCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS CCA 72 bp AGGCCTTGGCTGCTGCGGGTGGACGAGGGCGCGGGTTaGGGCGGAGCCGGGTCACCGGGTTCCGGGACTGTC +
Preference number: 6 (lower is better)
Translates to: RPWLLRVDEGAG*GGAGSPGSGTV
Trigger: GACAGTCCCGGAACCCGGTGACCCGGCTCCGCCCCAACCCGCGCCCTCGTCCACCCGCAGCAGCCAAGGCCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357003.7
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
ENST00000485496.1
CDS CCA 72 bp GGGCCGAGGGCCGGGATCGCGATACCTGCTGTAGCCTaGACTGGAACGCGCGAGCGACGGGCGTGGCGCGGG +
Preference number: 6 (lower is better)
Translates to: GPRAGIAIPAVA*TGTRERRAWRG
Trigger: CCCGCGCCACGCCCGTCGCTCGCGCGTTCCAGTCCAGGCTACAGCAGGTATCGCGATCCCGGCCCTCGGCCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS CCA 72 bp GAGGGCCGGGATCGCGATACCTGCTGTAGCCTGGACTaGAACGCGCGAGCGACGGGCGTGGCGCGGGCTCCC +
Preference number: 6 (lower is better)
Translates to: EGRDRDTCCSLD*NARATGVARAP
Trigger: GGGAGCCCGCGCCACGCCCGTCGCTCGCGCGTTCCAGTCCAGGCTACAGCAGGTATCGCGATCCCGGCCCTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS GCA 72 bp CCTCCAAGGCGGCTTCCTGGCACCGCCGCGCCCTTCTaGACCCAAGCGAGAGTGGACGGGACCTCCGTCGCC +
Preference number: 6 (lower is better)
Translates to: PPRRLPGTAAPF*TQARVDGTSVA
Trigger: GGCGACGGAGGTCCCGTCCACTCTCGCTTGGGTGCAGAAGGGCGCGGCGGTGCCAGGAAGCCGCCTTGGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471850.1
ENST00000478399.5
ENST00000481816.5
ENST00000485496.1
CDS CCA 72 bp GAATGCAGGCTGGAGAGCCCCTGCTGTAGCCTGGACTaGAACGCGCGAGCGACGGGCGTGGCGCGGGCTCCC +
Preference number: 6 (lower is better)
Translates to: ECRLESPCCSLD*NARATGVARAP
Trigger: GGGAGCCCGCGCCACGCCCGTCGCTCGCGCGTTCCAGTCCAGGCTACAGCAGGGGCTCTCCAGCCTGCATTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357003.7
CDS CCA 72 bp GTTGTGCACCGAGGCACCACCTGCTGTAGCCTGGACTaGAACGCGCGAGCGACGGGCGTGGCGCGGGCTCCC +
Preference number: 6 (lower is better)
Translates to: VVHRGTTCCSLD*NARATGVARAP
Trigger: GGGAGCCCGCGCCACGCCCGTCGCTCGCGCGTTCCAGTCCAGGCTACAGCAGGTGGTGCCTCGGTGCACAAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471850.1
ENST00000485496.1
CDS CCA 72 bp CCGGCTCTCGCCTGGCTGTGGTCAGTGACTCCCGTGTaGCCCCGGCTGACGCCTTCGCCCGTGCTCACGTCC +
Preference number: 6 (lower is better)
Translates to: PALAWLWSVTPV*PRLTPSPVLTS
Trigger: GGACGTGAGCACGGGCGAAGGCGTCAGCCGGGGCCACACGGGAGTCACTGACCACAGCCAGGCGAGAGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478399.5
ENST00000481816.5
CDS CAA 90 bp CGAGGGCCCCCGCACCTGCGCTTGGCCGCGCTGAGTGAGCTAATCTaGGAGCCTCCAAGGCGGCTTCCTGGCACCGCCGCGCCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: RGPPHLRLAALSELI*EPPRRLPGTAAPFC
Trigger: GCAGAAGGGCGCGGCGGTGCCAGGAAGCCGCCTTGGAGGCTCCAAGATTAGCTCACTCAGCGCGGCCAAGCGCAGGTGCGGGGGCCCTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
ENST00000485496.1
CDS CCA 72 bp CTGGCACCGCCGCGCCCTTCTGCACCCAAGCGAGAGTaGACGGGACCTCCGTCGCCCGCCCCAAATGCTCTG +
Preference number: 6 (lower is better)
Translates to: LAPPRPSAPKRE*TGPPSPAPNAL
Trigger: CAGAGCATTTGGGGCGGGCGACGGAGGTCCCGTCCACTCTCGCTTGGGTGCAGAAGGGCGCGGCGGTGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471850.1
ENST00000478399.5
ENST00000481816.5
ENST00000485496.1
CDS CCA 72 bp CCGGAATGTGGCGGCACCGGAAAGCCGGCTCTCGCCTaGCTGTGGTCAGTGACTCCCGTGTGGCCCCGGCTG +
Preference number: 6 (lower is better)
Translates to: PECGGTGKPALA*LWSVTPVWPRL
Trigger: CAGCCGGGGCCACACGGGAGTCACTGACCACAGCCAGGCGAGAGCCGGCTTTCCGGTGCCGCCACATTCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478399.5
ENST00000481816.5
CDS TCA 72 bp GCGAGGGCCCCCGCACCTGCGCTTGGCCGCGCTGAGTaGGCTAATCTTGGAGCCTCCAAGGCGGCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: ARAPAPALGRAE*ANLGASKAASW
Trigger: CCAGGAAGCCGCCTTGGAGGCTCCAAGATTAGCTCACTCAGCGCGGCCAAGCGCAGGTGCGGGGGCCCTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
ENST00000485496.1
CDS GCA 72 bp GCCCGCCCCAAATGCTCTGAAGAGCCCGGAGCCTGGTaGCCGGAATGTGGCGGCACCGGAAAGCCGGCTCTC +
Preference number: 6 (lower is better)
Translates to: ARPKCSEEPGAW*PECGGTGKPAL
Trigger: GAGAGCCGGCTTTCCGGTGCCGCCACATTCCGGGCACCAGGCTCCGGGCTCTTCAGAGCATTTGGGGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471850.1
ENST00000478399.5
ENST00000481816.5
CDS CCA 72 bp GTCGCCCGCCCCAAATGCTCTGAAGAGCCCGGAGCCTaGTGCCCGGAATGTGGCGGCACCGGAAAGCCGGCT +
Preference number: 6 (lower is better)
Translates to: VARPKCSEEPGA*CPECGGTGKPA
Trigger: AGCCGGCTTTCCGGTGCCGCCACATTCCGGGCACCAGGCTCCGGGCTCTTCAGAGCATTTGGGGCGGGCGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471850.1
ENST00000478399.5
ENST00000481816.5
CDS CAA 72 bp CCGCACCTGCGCTTGGCCGCGCTGAGTGAGCTAATCTaGGAGCCTCCAAGGCGGCTTCCTGGCACCGCCGCG +
Preference number: 6 (lower is better)
Translates to: PHLRLAALSELI*EPPRRLPGTAA
Trigger: CGCGGCGGTGCCAGGAAGCCGCCTTGGAGGCTCCAAGATTAGCTCACTCAGCGCGGCCAAGCGCAGGTGCGG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
ENST00000485496.1
CDS GCA 72 bp GCGAGAGTGGACGGGACCTCCGTCGCCCGCCCCAAATaGTCTGAAGAGCCCGGAGCCTGGTGCCCGGAATGT +
Preference number: 6 (lower is better)
Translates to: ARVDGTSVARPK*SEEPGAWCPEC
Trigger: ACATTCCGGGCACCAGGCTCCGGGCTCTTCAGAGCATTTGGGGCGGGCGACGGAGGTCCCGTCCACTCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471850.1
ENST00000478399.5
ENST00000481816.5
CDS CCA 72 bp TCCTCCAGCCATTGGGCTTGCCCGGCTTCAGCTGCATaGCGTTGTGCACCGAGGCACCACCTGGTGCCCGCC +
Preference number: 6 (lower is better)
Translates to: SSSHWACPASAA*RCAPRHHLVPA
Trigger: GGCGGGCACCAGGTGGTGCCTCGGTGCACAACGCCATGCAGCTGAAGCCGGGCAAGCCCAATGGCTGGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
CDS CAA 72 bp CAGCCATTGGGCTTGCCCGGCTTCAGCTGCATGGCGTaGTGCACCGAGGCACCACCTGGTGCCCGCCCATCC +
Preference number: 6 (lower is better)
Translates to: QPLGLPGFSCMA*CTEAPPGARPS
Trigger: GGATGGGCGGGCACCAGGTGGTGCCTCGGTGCACAACGCCATGCAGCTGAAGCCGGGCAAGCCCAATGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
CDS CAA 72 bp GCCCGCATGGCAGCCCCACAGCCGCCCTCATGGCTGTaGAAGGGAATCCTCCAGCCATTGGGCTTGCCCGGC +
Preference number: 6 (lower is better)
Translates to: ARMAAPQPPSWL*KGILQPLGLPG
Trigger: GCCGGGCAAGCCCAATGGCTGGAGGATTCCCTTCAACAGCCATGAGGGCGGCTGTGGGGCTGCCATGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000485496.1
CDS TCA 72 bp CCCGCATGGCAGCCCCACAGCCGCCCTCATGGCTGTTaGAGGGAATCCTCCAGCCATTGGGCTTGCCCGGCT +
Preference number: 6 (lower is better)
Translates to: PAWQPHSRPHGC*RESSSHWACPA
Trigger: AGCCGGGCAAGCCCAATGGCTGGAGGATTCCCTTCAACAGCCATGAGGGCGGCTGTGGGGCTGCCATGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000485496.1
CDS GCA 72 bp CCATTGGGCTTGCCCGGCTTCAGCTGCATGGCGTTGTaGACCGAGGCACCACCTGGTGCCCGCCCATCCATG +
Preference number: 6 (lower is better)
Translates to: PLGLPGFSCMAL*TEAPPGARPSM
Trigger: CATGGATGGGCGGGCACCAGGTGGTGCCTCGGTGCACAACGCCATGCAGCTGAAGCCGGGCAAGCCCAATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
CDS GCA 72 bp GGAATCCTCCAGCCATTGGGCTTGCCCGGCTTCAGCTaGATGGCGTTGTGCACCGAGGCACCACCTGGTGCC +
Preference number: 6 (lower is better)
Translates to: GILQPLGLPGFS*MALCTEAPPGA
Trigger: GGCACCAGGTGGTGCCTCGGTGCACAACGCCATGCAGCTGAAGCCGGGCAAGCCCAATGGCTGGAGGATTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
CDS CCA 72 bp ACACGCTCCCACGATTTGCAAGACTGGGAATCCTCATaGTCGGCCACACTCGGAGAGCGCCAGGGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: TRSHDLQDWESS*SATLGERQGRG
Trigger: CCCCCGCCCCTGGCGCTCTCCGAGTGTGGCCGACCATGAGGATTCCCAGTCTTGCAAATCGTGGGAGCGTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS CAA 90 bp GCCCCACAGCCGCCCTCATGGCTGTTGAAGGGAATCCTCCAGCCATaGGGCTTGCCCGGCTTCAGCTGCATGGCGTTGTGCACCGAGGCA +
Preference number: 6 (lower is better)
Translates to: APQPPSWLLKGILQP*GLPGFSCMALCTEA
Trigger: TGCCTCGGTGCACAACGCCATGCAGCTGAAGCCGGGCAAGCCCAATGGCTGGAGGATTCCCTTCAACAGCCATGAGGGCGGCTGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000485496.1
CDS CAA 90 bp ATGCACATGGCCCGCATGGCAGCCCCACAGCCGCCCTCATGGCTGTaGAAGGGAATCCTCCAGCCATTGGGCTTGCCCGGCTTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: MHMARMAAPQPPSWL*KGILQPLGLPGFSC
Trigger: GCAGCTGAAGCCGGGCAAGCCCAATGGCTGGAGGATTCCCTTCAACAGCCATGAGGGCGGCTGTGGGGCTGCCATGCGGGCCATGTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000485496.1
CDS GCA 72 bp CCATTGGGCTTGCCCGGCTTCAGCTGCATGGCGTTGTaGACCGAGGCACCACCTGCTGTAGCCTGGACTGGA +
Preference number: 6 (lower is better)
Translates to: PLGLPGFSCMAL*TEAPPAVAWTG
Trigger: TCCAGTCCAGGCTACAGCAGGTGGTGCCTCGGTGCACAACGCCATGCAGCTGAAGCCGGGCAAGCCCAATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471850.1
ENST00000485496.1
CDS CCA 72 bp CACCTTCCCACGTCTAGGGCATCCAAGCCGCCCAGCTaGGCCAACTGCCGGTGTATCTTCTCCCCATCCTGG +
Preference number: 6 (lower is better)
Translates to: HLPTSRASKPPS*ANCRCIFSPSW
Trigger: CCAGGATGGGGAGAAGATACACCGGCAGTTGGCCCAGCTGGGCGGCTTGGATGCCCTAGACGTGGGAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
CDS CCA 72 bp CACATGGCCCGCATGGCAGCCCCACAGCCGCCCTCATaGCTGTTGAAGGGAATCCTCCAGCCATTGGGCTTG +
Preference number: 6 (lower is better)
Translates to: HMARMAAPQPPS*LLKGILQPLGL
Trigger: CAAGCCCAATGGCTGGAGGATTCCCTTCAACAGCCATGAGGGCGGCTGTGGGGCTGCCATGCGGGCCATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000485496.1
CDS CAA 72 bp CAGCCATTGGGCTTGCCCGGCTTCAGCTGCATGGCGTaGTGCACCGAGGCACCACCTGCTGTAGCCTGGACT +
Preference number: 6 (lower is better)
Translates to: QPLGLPGFSCMA*CTEAPPAVAWT
Trigger: AGTCCAGGCTACAGCAGGTGGTGCCTCGGTGCACAACGCCATGCAGCTGAAGCCGGGCAAGCCCAATGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471850.1
ENST00000485496.1
CDS CAA 90 bp CAGCCGCCCTCATGGCTGTTGAAGGGAATCCTCCAGCCATTGGGCTaGCCCGGCTTCAGCTGCATGGCGTTGTGCACCGAGGCACCACCT +
Preference number: 6 (lower is better)
Translates to: QPPSWLLKGILQPLG*PGFSCMALCTEAPP
Trigger: AGGTGGTGCCTCGGTGCACAACGCCATGCAGCTGAAGCCGGGCAAGCCCAATGGCTGGAGGATTCCCTTCAACAGCCATGAGGGCGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000485496.1
CDS GCA 72 bp ACGTCTAGGGCATCCAAGCCGCCCAGCTGGGCCAACTaGCGGTGTATCTTCTCCCCATCCTGGAGGAACTCC +
Preference number: 6 (lower is better)
Translates to: TSRASKPPSWAN*RCIFSPSWRNS
Trigger: GGAGTTCCTCCAGGATGGGGAGAAGATACACCGGCAGTTGGCCCAGCTGGGCGGCTTGGATGCCCTAGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
CDS GCA 72 bp GGAATCCTCCAGCCATTGGGCTTGCCCGGCTTCAGCTaGATGGCGTTGTGCACCGAGGCACCACCTGCTGTA +
Preference number: 6 (lower is better)
Translates to: GILQPLGLPGFS*MALCTEAPPAV
Trigger: TACAGCAGGTGGTGCCTCGGTGCACAACGCCATGCAGCTGAAGCCGGGCAAGCCCAATGGCTGGAGGATTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471850.1
ENST00000485496.1
CDS CCA 72 bp ACGGGGCGGTTGACACGCTCCCACGATTTGCAAGACTaGGAATCCTCATGGTCGGCCACACTCGGAGAGCGC +
Preference number: 6 (lower is better)
Translates to: TGRLTRSHDLQD*ESSWSATLGER
Trigger: GCGCTCTCCGAGTGTGGCCGACCATGAGGATTCCCAGTCTTGCAAATCGTGGGAGCGTGTCAACCGCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS CAA 72 bp CCGCCCTCATGGCTGTTGAAGGGAATCCTCCAGCCATaGGGCTTGCCCGGCTTCAGCTGCATGGCGTTGTGC +
Preference number: 6 (lower is better)
Translates to: PPSWLLKGILQP*GLPGFSCMALC
Trigger: GCACAACGCCATGCAGCTGAAGCCGGGCAAGCCCAATGGCTGGAGGATTCCCTTCAACAGCCATGAGGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000485496.1
CDS CAA 90 bp GCCCGGCTTTGGAAAGAAACGGGGCGGTTGACACGCTCCCACGATTaGCAAGACTGGGAATCCTCATGGTCGGCCACACTCGGAGAGCGC +
Preference number: 6 (lower is better)
Translates to: ARLWKETGRLTRSHD*QDWESSWSATLGER
Trigger: GCGCTCTCCGAGTGTGGCCGACCATGAGGATTCCCAGTCTTGCAAATCGTGGGAGCGTGTCAACCGCCCCGTTTCTTTCCAAAGCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS CAA 72 bp CCGGGCCATGCCCGGCTTTGGAAAGAAACGGGGCGGTaGACACGCTCCCACGATTTGCAAGACTGGGAATCC +
Preference number: 6 (lower is better)
Translates to: PGHARLWKETGR*TRSHDLQDWES
Trigger: GGATTCCCAGTCTTGCAAATCGTGGGAGCGTGTCAACCGCCCCGTTTCTTTCCAAAGCCGGGCATGGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS CAA 90 bp CAGCTGCTTCCGGGCCATGCCCGGCTTTGGAAAGAAACGGGGCGGTaGACACGCTCCCACGATTTGCAAGACTGGGAATCCTCATGGTCG +
Preference number: 6 (lower is better)
Translates to: QLLPGHARLWKETGR*TRSHDLQDWESSWS
Trigger: CGACCATGAGGATTCCCAGTCTTGCAAATCGTGGGAGCGTGTCAACCGCCCCGTTTCTTTCCAAAGCCGGGCATGGCCCGGAAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS TCA 72 bp CGGGCCATGCCCGGCTTTGGAAAGAAACGGGGCGGTTaGCACGCTCCCACGATTTGCAAGACTGGGAATCCT +
Preference number: 6 (lower is better)
Translates to: RAMPGFGKKRGG*HAPTICKTGNP
Trigger: AGGATTCCCAGTCTTGCAAATCGTGGGAGCGTGTCAACCGCCCCGTTTCTTTCCAAAGCCGGGCATGGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS GCA 72 bp GTCAGGAGGCTTCCAGAAGTGCTTCTGCAGCTGCACTaGTGTTGGCCATGGAATGCAGGCTGGAGAGCCCCT +
Preference number: 6 (lower is better)
Translates to: VRRLPEVLLQLH*CWPWNAGWRAP
Trigger: AGGGGCTCTCCAGCCTGCATTCCATGGCCAACAGCAGTGCAGCTGCAGAAGCACTTCTGGAAGCCTCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000478399.5
ENST00000481816.5
CDS CCA 72 bp AGATCTGATCAGCTGCTTCCGGGCCATGCCCGGCTTTaGAAAGAAACGGGGCGGTTGACACGCTCCCACGAT +
Preference number: 6 (lower is better)
Translates to: RSDQLLPGHARL*KETGRLTRSHD
Trigger: ATCGTGGGAGCGTGTCAACCGCCCCGTTTCTTTCCAAAGCCGGGCATGGCCCGGAAGCAGCTGATCAGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS CCA 72 bp CAGACACCCGGGACAGCGGTTTGCCCATCTGTAAACTaGAGGGGGAAGTGGGGAGGTATAGGCTCTCGGAAG +
Preference number: 6 (lower is better)
Translates to: QTPGTAVCPSVN*RGKWGGIGSRK
Trigger: CTTCCGAGAGCCTATACCTCCCCACTTCCCCCTCCAGTTTACAGATGGGCAAACCGCTGTCCCGGGTGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS CAA 72 bp TCATGGCTGTTGAAGGGAATCCTCCAGCCATTGGGCTaGCCCGGCTTCAGCTGCATGGCGTTGTGCACCGAG +
Preference number: 6 (lower is better)
Translates to: SWLLKGILQPLG*PGFSCMALCTE
Trigger: CTCGGTGCACAACGCCATGCAGCTGAAGCCGGGCAAGCCCAATGGCTGGAGGATTCCCTTCAACAGCCATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
ENST00000485496.1
CDS CAA 72 bp CCCAGATGCTTGAAGAGCGTACTGAGTGTGCCGCCCTaGCCAGGGTTCTGGGCCCTCACGCATAAAGTGGGA +
Preference number: 6 (lower is better)
Translates to: PRCLKSVLSVPP*PGFWALTHKVG
Trigger: TCCCACTTTATGCGTGAGGGCCCAGAACCCTGGCAAGGGCGGCACACTCAGTACGCTCTTCAAGCATCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS CCA 72 bp AGGCTTCCAGAAGTGCTTCTGCAGCTGCACTGCTGTTaGCCATGGAATGCAGGCTGGAGAGCCCCTGCTGTA +
Preference number: 6 (lower is better)
Translates to: RLPEVLLQLHCC*PWNAGWRAPAV
Trigger: TACAGCAGGGGCTCTCCAGCCTGCATTCCATGGCCAACAGCAGTGCAGCTGCAGAAGCACTTCTGGAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357003.7
CDS CCA 72 bp GCTCACTTGGATCAGTGTGTCCAGTTGGCTATGGTGTaGGAACCTGAGACCGATGCACATGGCCCGCATGGC +
Preference number: 6 (lower is better)
Translates to: AHLDQCVQLAMV*EPETDAHGPHG
Trigger: GCCATGCGGGCCATGTGCATCGGTCTCAGGTTCCCACACCATAGCCAACTGGACACACTGATCCAAGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000485496.1
CDS CCA 72 bp AGGCTTCCAGAAGTGCTTCTGCAGCTGCACTGCTGTTaGCCATGGAATGCAGGCTGGAGAGCCCCTGGAGAA +
Preference number: 6 (lower is better)
Translates to: RLPEVLLQLHCC*PWNAGWRAPGE
Trigger: TTCTCCAGGGGCTCTCCAGCCTGCATTCCATGGCCAACAGCAGTGCAGCTGCAGAAGCACTTCTGGAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478399.5
ENST00000481816.5
CDS CCA 72 bp ACAGCGGTTTGCCCATCTGTAAACTGGAGGGGGAAGTaGGGAGGTATAGGCTCTCGGAAGTTCCGTCCTGCG +
Preference number: 6 (lower is better)
Translates to: TAVCPSVNWRGK*GGIGSRKFRPA
Trigger: CGCAGGACGGAACTTCCGAGAGCCTATACCTCCCCACTTCCCCCTCCAGTTTACAGATGGGCAAACCGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS CAA 90 bp GGTCATCCGACCACTCTCGATGCTCACTTGGATCAGTGTGTCCAGTaGGCTATGGTGTGGGAACCTGAGACCGATGCACATGGCCCGCAT +
Preference number: 6 (lower is better)
Translates to: GHPTTLDAHLDQCVQ*AMVWEPETDAHGPH
Trigger: ATGCGGGCCATGTGCATCGGTCTCAGGTTCCCACACCATAGCCAACTGGACACACTGATCCAAGTGAGCATCGAGAGTGGTCGGATGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000485496.1
CDS GCA 72 bp AGTGCTTCTGCAGCTGCACTGCTGTTGGCCATGGAATaGAGGCTGGAGAGCCCCTGGAGAAGGAGTAAACGA +
Preference number: 6 (lower is better)
Translates to: SASAAALLLAME*RLESPWRRSKR
Trigger: TCGTTTACTCCTTCTCCAGGGGCTCTCCAGCCTGCATTCCATGGCCAACAGCAGTGCAGCTGCAGAAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478399.5
ENST00000481816.5
CDS CCA 72 bp TCGATGCTCACTTGGATCAGTGTGTCCAGTTGGCTATaGTGTGGGAACCTGAGACCGATGCACATGGCCCGC +
Preference number: 6 (lower is better)
Translates to: SMLTWISVSSWL*CGNLRPMHMAR
Trigger: GCGGGCCATGTGCATCGGTCTCAGGTTCCCACACCATAGCCAACTGGACACACTGATCCAAGTGAGCATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000485496.1
CDS CCA 72 bp CTGCTGTTGGCCATGGAATGCAGGCTGGAGAGCCCCTaGAGAAGGAGTAAACGACGAAGATGGATGCGTTCC +
Preference number: 6 (lower is better)
Translates to: LLLAMECRLESP*RRSKRRRWMRS
Trigger: GGAACGCATCCATCTTCGTCGTTTACTCCTTCTCCAGGGGCTCTCCAGCCTGCATTCCATGGCCAACAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478399.5
ENST00000481816.5
CDS CCA 72 bp CTGCAGCTGCACTGCTGTTGGCCATGGAATGCAGGCTaGAGAGCCCCTGGAGAAGGAGTAAACGACGAAGAT +
Preference number: 6 (lower is better)
Translates to: LQLHCCWPWNAG*RAPGEGVNDED
Trigger: ATCTTCGTCGTTTACTCCTTCTCCAGGGGCTCTCCAGCCTGCATTCCATGGCCAACAGCAGTGCAGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478399.5
ENST00000481816.5
CDS CAA 72 bp TGGAAAGAAACGGGGCGGTTGACACGCTCCCACGATTaGCAAGACTGGGAATCCTCATGGTCGGCCACACTC +
Preference number: 6 (lower is better)
Translates to: WKETGRLTRSHD*QDWESSWSATL
Trigger: GAGTGTGGCCGACCATGAGGATTCCCAGTCTTGCAAATCGTGGGAGCGTGTCAACCGCCCCGTTTCTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS GCA 72 bp TTCAAGTCAGGAGGCTTCCAGAAGTGCTTCTGCAGCTaGACTGCTGTTGGCCATGGAATGCAGGCTGGAGAG +
Preference number: 6 (lower is better)
Translates to: FKSGGFQKCFCS*TAVGHGMQAGE
Trigger: CTCTCCAGCCTGCATTCCATGGCCAACAGCAGTGCAGCTGCAGAAGCACTTCTGGAAGCCTCCTGACTTGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000478399.5
ENST00000481816.5
CDS CCA 72 bp CAGCCACATACTTCTCCATCAGTCCCTCACAATTGCTaGGCTCTGGAGAGGGTGTCTGCTGTAGCCTGGACT +
Preference number: 6 (lower is better)
Translates to: QPHTSPSVPHNC*ALERVSAVAWT
Trigger: AGTCCAGGCTACAGCAGACACCCTCTCCAGAGCCCAGCAATTGTGAGGGACTGATGGAGAAGTATGTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478927.5
CDS GCA 72 bp CCACTTCCCATTGTAGTACCCCAGGGCATCTCCAGCTaGACTCAGCACCATAGCAGCCACATACTTCTCCAT +
Preference number: 6 (lower is better)
Translates to: PLPIVVPQGISS*TQHHSSHILLH
Trigger: ATGGAGAAGTATGTGGCTGCTATGGTGCTGAGTGCAGCTGGAGATGCCCTGGGGTACTACAATGGGAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
CDS GCA 72 bp TTCCCAGCTTCCACAAGAGCTTCTGCTGTGGCCAAGTaGATCACTGTGTCGTCACTAACTCTCCACCTTCCC +
Preference number: 6 (lower is better)
Translates to: FPASTRASAVAK*ITVSSLTLHLP
Trigger: GGGAAGGTGGAGAGTTAGTGACGACACAGTGATGCACTTGGCCACAGCAGAAGCTCTTGTGGAAGCTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
CDS CCA 72 bp CCACTCTCGATGCTCACTTGGATCAGTGTGTCCAGTTaGCTATGGTGTGGGAACCTGAGACCGATGCACATG +
Preference number: 6 (lower is better)
Translates to: PLSMLTWISVSS*LWCGNLRPMHM
Trigger: CATGTGCATCGGTCTCAGGTTCCCACACCATAGCCAACTGGACACACTGATCCAAGTGAGCATCGAGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000471850.1
ENST00000478399.5
ENST00000478927.5
ENST00000485496.1
CDS CCA 72 bp CTGGAGAGCCCCTGGAGAAGGAGTAAACGACGAAGATaGATGCGTTCCACTACCCAGTTACTGGTAATGCTG +
Preference number: 6 (lower is better)
Translates to: LESPWRRSKRRR*MRSTTQLLVML
Trigger: CAGCATTACCAGTAACTGGGTAGTGGAACGCATCCATCTTCGTCGTTTACTCCTTCTCCAGGGGCTCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478399.5
ENST00000481816.5
CDS CAA 72 bp TCCTTCTGGCTCCACCCTAATGTGTGCTTCTGTGAATaGCAAGCTGGGATGGGGGAAGAAGACCGGCATCTT +
Preference number: 6 (lower is better)
Translates to: SFWLHPNVCFCE*QAGMGEEDRHL
Trigger: AAGATGCCGGTCTTCTTCCCCCATCCCAGCTTGCAATTCACAGAAGCACACATTAGGGTGGAGCCAGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS CCA 72 bp ATACTTCTCCATCAGTCCCTCACAATTGCTGGGCTCTaGAGAGGGTGTCCAAGGTCTAGTTCAAGTCAGGAG +
Preference number: 6 (lower is better)
Translates to: ILLHQSLTIAGL*RGCPRSSSSQE
Trigger: CTCCTGACTTGAACTAGACCTTGGACACCCTCTCCAGAGCCCAGCAATTGTGAGGGACTGATGGAGAAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357003.7
ENST00000478399.5
ENST00000481816.5
CDS CAA 72 bp ATAGCAGCCACATACTTCTCCATCAGTCCCTCACAATaGCTGGGCTCTGGAGAGGGTGTCTTTGTGGGGAAA +
Preference number: 6 (lower is better)
Translates to: IAATYFSISPSQ*LGSGEGVFVGK
Trigger: TTTCCCCACAAAGACACCCTCTCCAGAGCCCAGCAATTGTGAGGGACTGATGGAGAAGTATGTGGCTGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465513.1
CDS TCA 72 bp TTCTCGTACCCGAACTATACATTCAGAACTAAGATCTaGTCAGCTGCTTCCGGGCCATGCCCGGCTTTGGAA +
Preference number: 6 (lower is better)
Translates to: FSYPNYTFRTKI*SAASGPCPALE
Trigger: TTCCAAAGCCGGGCATGGCCCGGAAGCAGCTGATCAGATCTTAGTTCTGAATGTATAGTTCGGGTACGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS GCA 72 bp CCTTTCCGTAATTCCTTCTGGCTCCACCCTAATGTGTaGTTCTGTGAATTGCAAGCTGGGATGGGGGAAGAA +
Preference number: 6 (lower is better)
Translates to: PFRNSFWLHPNV*FCELQAGMGEE
Trigger: TTCTTCCCCCATCCCAGCTTGCAATTCACAGAAGCACACATTAGGGTGGAGCCAGAAGGAATTACGGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS CCA 72 bp CGCCCTTGCCAGGGTTCTGGGCCCTCACGCATAAAGTaGGATAATAATATCTGCCTCTTAGAATGGTTGTTA +
Preference number: 6 (lower is better)
Translates to: RPCQGSGPSRIK*DNNICLLEWLL
Trigger: TAACAACCATTCTAAGAGGCAGATATTATTATCCCACTTTATGCGTGAGGGCCCAGAACCCTGGCAAGGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS CAA 90 bp GTCTTCCATGCAGTCTTGGTAATGCTTAGCAAGGAGGTAATACAGTaGAGTCAACTTAGGGGCTTTCCCAGCTTCCACAAGAGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: VFHAVLVMLSKEVIQ*SQLRGFPSFHKSFC
Trigger: GCAGAAGCTCTTGTGGAAGCTGGGAAAGCCCCTAAGTTGACTCAACTGTATTACCTCCTTGCTAAGCATTACCAAGACTGCATGGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
CDS CCA 72 bp ATACTTCTCCATCAGTCCCTCACAATTGCTGGGCTCTaGAGAGGGTGTCTTTGTGGGGAAATTAAGACAAAG +
Preference number: 6 (lower is better)
Translates to: ILLHQSLTIAGL*RGCLCGEIKTK
Trigger: CTTTGTCTTAATTTCCCCACAAAGACACCCTCTCCAGAGCCCAGCAATTGTGAGGGACTGATGGAGAAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465513.1
CDS CAA 72 bp GCAGTCTTGGTAATGCTTAGCAAGGAGGTAATACAGTaGAGTCAACTTAGGGGCTTTCCCAGCTTCCACAAG +
Preference number: 6 (lower is better)
Translates to: AVLVMLSKEVIQ*SQLRGFPSFHK
Trigger: CTTGTGGAAGCTGGGAAAGCCCCTAAGTTGACTCAACTGTATTACCTCCTTGCTAAGCATTACCAAGACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357003.7
ENST00000465513.1
ENST00000478399.5
ENST00000478927.5
ENST00000481816.5
CDS TCA 72 bp TTACATAGTTTATTATTTACAGTGAAGCCTAGGCACTaGGATTCTGGGCTACTAGACCTGACAGACACCCGG +
Preference number: 6 (lower is better)
Translates to: LHSLLFTVKPRH*DSGLLDLTDTR
Trigger: CCGGGTGTCTGTCAGGTCTAGTAGCCCAGAATCTCAGTGCCTAGGCTTCACTGTAAATAATAAACTATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS CCA 72 bp TCTCAATGTCCTCATTGTCCTTTCCGTAATTCCTTCTaGCTCCACCCTAATGTGTGCTTCTGTGAATTGCAA +
Preference number: 6 (lower is better)
Translates to: SQCPHCPFRNSF*LHPNVCFCELQ
Trigger: TTGCAATTCACAGAAGCACACATTAGGGTGGAGCCAGAAGGAATTACGGAAAGGACAATGAGGACATTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5
CDS GCA 72 bp TCTGGGCCCTCACGCATAAAGTGGGATAATAATATCTaGCTCTTAGAATGGTTGTTAAGGATTCAGTTAGTT +
Preference number: 6 (lower is better)
Translates to: SGPSRIKWDNNI*LLEWLLRIQLV
Trigger: AACTAACTGAATCCTTAACAACCATTCTAAGAGGCAGATATTATTATCCCACTTTATGCGTGAGGGCCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478399.5