RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADPGK (Homo sapiens)

Ensembl gene IDs: ENSG00000159322

Ensembl transcript IDs: ENST00000311669.12, ENST00000456471.3, ENST00000562286.1, ENST00000562621.1, ENST00000562823.1, ENST00000563907.5, ENST00000565814.1, ENST00000566509.5, ENST00000567733.1, ENST00000567941.5, ENST00000569058.1, ENST00000569517.5, ENST00000569534.5, ENST00000569693.5

Found 644 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCGCCAAGGGGCCAGCGCGGACAGCAGCGCCTCCCGGGGACCTCTaGGAAGCCCTGTTTCTGCGCGGCTCCGCCCGACCTCCAAGGCCG +
Preference number: 1 (lower is better)
Translates to: LAKGPARTAAPPGDL*EALFLRGSARPPRP
Trigger: CGGCCTTGGAGGTCGGGCGGAGCCGCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGGCGCTGCTGTCCGCGCTGGCCCCTTGGCGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
3UTR GCA 90 bp CGCGGACAGCAGCGCCTCCCGGGGACCTCTGAGAAGCCCTGTTTCTaGGCGGCTCCGCCCGACCTCCAAGGCCGACCTCGGAGGCTCAGA +
Preference number: 1 (lower is better)
Translates to: RGQQRLPGTSEKPCF*AAPPDLQGRPRRLR
Trigger: TCTGAGCCTCCGAGGTCGGCCTTGGAGGTCGGGCGGAGCCGCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGGCGCTGCTGTCCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
3UTR CCA 90 bp GTGTCCCAGCCACACGAGCTCCTGCAGCCACGGCTGCCAGCTGGTTaGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCG +
Preference number: 1 (lower is better)
Translates to: VSQPHELLQPRLPAG*PSVHPQLPGCGRPA
Trigger: CGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGCTGCAGGAGCTCGTGTGGCTGGGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR GCA 90 bp TATGGTTTCTGTGGCGCAGGCCTGTGTCCCAGCCACACGAGCTCCTaGAGCCACGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGT +
Preference number: 1 (lower is better)
Translates to: YGFCGAGLCPSHTSS*SHGCQLVGPVSIHS
Trigger: ACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGCTGCAGGAGCTCGTGTGGCTGGGACACAGGCCTGCGCCACAGAAACCATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR TCA 90 bp GATGAGAGAAAGGCGCAGAGGCCAGCCGAGTGGAAAGAGCAGCGGTaGCGAACCGGGTTCCACTCAGACGTCCGACACTTCTCGCCAAGG +
Preference number: 1 (lower is better)
Translates to: DERKAQRPAEWKEQR*RTGFHSDVRHFSPR
Trigger: CCTTGGCGAGAAGTGTCGGACGTCTGAGTGGAACCCGGTTCGTCACCGCTGCTCTTTCCACTCGGCTGGCCTCTGCGCCTTTCTCTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562286.1
ENST00000567941.5
ENST00000569517.5
3UTR GCA 90 bp TGCAGCCACGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTTaGCAGGATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAG +
Preference number: 1 (lower is better)
Translates to: CSHGCQLVGPVSIHS*QDVVDQRVEMDPGE
Trigger: CTCACCAGGATCCATTTCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR GCA 90 bp AATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTaGCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTGGCGCA +
Preference number: 1 (lower is better)
Translates to: NPGACLRMGSHELLG*PQRHSAGVYGFCGA
Trigger: TGCGCCACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR GCA 90 bp GGTCGGTTTAGCACAGGATGCAGAGGCTCAGGCAAGAAGATGTTCTaGCCTGTCCTACTCAAGCTGCTGCCCACATCTGAAGGGATACAG +
Preference number: 1 (lower is better)
Translates to: GRFSTGCRGSGKKMF*PVLLKLLPTSEGIQ
Trigger: CTGTATCCCTTCAGATGTGGGCAGCAGCTTGAGTAGGACAGGGCAGAACATCTTCTTGCCTGAGCCTCTGCATCCTGTGCTAAACCGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
3UTR GCA 90 bp GGTTACAACCCTGCAGCTTGCAGCCATGGTCGGTTTAGCACAGGATaGAGAGGCTCAGGCAAGAAGATGTTCTGCCCTGTCCTACTCAAG +
Preference number: 1 (lower is better)
Translates to: GYNPAACSHGRFSTG*RGSGKKMFCPVLLK
Trigger: CTTGAGTAGGACAGGGCAGAACATCTTCTTGCCTGAGCCTCTGCATCCTGTGCTAAACCGACCATGGCTGCAAGCTGCAGGGTTGTAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
3UTR TCA 90 bp TTGGGTTTAATACAATCCTGGAGCCTGCCTCCGAATGGGAAGTCATaGACTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGG +
Preference number: 1 (lower is better)
Translates to: LGLIQSWSLPPNGKS*TLGVPSETLGWCLW
Trigger: CCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTATTAAACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR CCA 90 bp GGAACCTCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTaGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGCTTTTCTCC +
Preference number: 1 (lower is better)
Translates to: GTSHEAFLETRMLGE*ACTSQVGKEELLFS
Trigger: GGAGAAAAGCAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGAGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR CCA 90 bp AATACAATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTaGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTG +
Preference number: 1 (lower is better)
Translates to: NTILEPASEWEVMNS*GALRDTRLVSMVSV
Trigger: CACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR CCA 90 bp ACTGGCTTGTTTGGGTTTAATACAATCCTGGAGCCTGCCTCCGAATaGGAAGTCATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTG +
Preference number: 1 (lower is better)
Translates to: TGLFGFNTILEPASE*EVMNSWGALRDTRL
Trigger: CAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTATTAAACCCAAACAAGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR GCA 90 bp TGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTaGTTTTCTCCAGCTGACATGCTCTCAGGGGTGAAGAAGTTTAGC +
Preference number: 1 (lower is better)
Translates to: CWVSGRALLKWARKN*FSPADMLSGVKKFS
Trigger: GCTAAACTTCTTCACCCCTGAGAGCATGTCAGCTGGAGAAAAGCAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR TCA 90 bp ATGCTGCTCATGAGCTCCCTGTTAGTCATACTGGCCAGCTCTAGGTaGACTGGAATACCAGTGGGGATGTCAGAAATGGAGGTTACAACC +
Preference number: 1 (lower is better)
Translates to: MLLMSSLLVILASSR*TGIPVGMSEMEVTT
Trigger: GGTTGTAACCTCCATTTCTGACATCCCCACTGGTATTCCAGTTCACCTAGAGCTGGCCAGTATGACTAACAGGGAGCTCATGAGCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
3UTR TCA 90 bp TTTTACTCCTCCCATGTTCTTTCAAGATCCAGAAGAGGATGTCACTaGCCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAG +
Preference number: 1 (lower is better)
Translates to: FYSSHVLSRSRRGCH*PCPHQEHRSRKREK
Trigger: CTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCTGGATCTTGAAAGAACATGGGAGGAGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
3UTR TCA 90 bp CAAGGCCTACAGTTCGAATGGGGTCTTTACACACCAATACTGGTGTaGAGTGGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCT +
Preference number: 1 (lower is better)
Translates to: QGLQFEWGLYTPILV*SGRIFPLCAILLLA
Trigger: AGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACTTCACACCAGTATTGGTGTGTAAAGACCCCATTCGAACTGTAGGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR TCA 90 bp TCCCTTCCCCATGAAGTGAATGAAGGCTTCTTCCAGATCATTCCTTaGATGCAGAATGCTGTGATCTTTCCCATTCCCAGGACTAAGGCC +
Preference number: 1 (lower is better)
Translates to: SLPHEVNEGFFQIIP*MQNAVIFPIPRTKA
Trigger: GGCCTTAGTCCTGGGAATGGGAAAGATCACAGCATTCTGCATTCAAGGAATGATCTGGAAGAAGCCTTCATTCACTTCATGGGGAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR TCA 90 bp TTATCACTGAAGAAGCGCTCAGCAGCTGCTCCCTTCCCCATGAAGTaGATGAAGGCTTCTTCCAGATCATTCCTTGAATGCAGAATGCTG +
Preference number: 1 (lower is better)
Translates to: LSLKKRSAAAPFPMK*MKASSRSFLECRML
Trigger: CAGCATTCTGCATTCAAGGAATGATCTGGAAGAAGCCTTCATTCACTTCATGGGGAAGGGAGCAGCTGCTGAGCGCTTCTTCAGTGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR TCA 90 bp TTCCTAATAGTGAGGGTGTACTTCCGAATAGAAGAGTCCTTCGGCTaGAATGGCATCTCCAAGGCCTACAGTTCGAATGGGGTCTTTACA +
Preference number: 1 (lower is better)
Translates to: FLIVRVYFRIEESFG*NGISKAYSSNGVFT
Trigger: TGTAAAGACCCCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGCCGAAGGACTCTTCTATTCGGAAGTACACCCTCACTATTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR CCA 90 bp ATCTCCAAGGCCTACAGTTCGAATGGGGTCTTTACACACCAATACTaGTGTGAAGTGGAAGGATATTCCCTCTCTGTGCCATTCTACTAC +
Preference number: 1 (lower is better)
Translates to: ISKAYSSNGVFTHQY*CEVEGYSLSVPFYY
Trigger: GTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACTTCACACCAGTATTGGTGTGTAAAGACCCCATTCGAACTGTAGGCCTTGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR GCA 90 bp AATGTCGTGAAAAGTTTCCTTATCACTGAAGAAGCGCTCAGCAGCTaGTCCCTTCCCCATGAAGTGAATGAAGGCTTCTTCCAGATCATT +
Preference number: 1 (lower is better)
Translates to: NVVKSFLITEEALSS*SLPHEVNEGFFQII
Trigger: AATGATCTGGAAGAAGCCTTCATTCACTTCATGGGGAAGGGAGCAGCTGCTGAGCGCTTCTTCAGTGATAAGGAAACTTTTCACGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR CCA 90 bp CCTACAGTTCGAATGGGGTCTTTACACACCAATACTGGTGTGAAGTaGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTTGTTT +
Preference number: 1 (lower is better)
Translates to: PTVRMGSLHTNTGVK*KDIPSLCHSTTGLF
Trigger: AAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACTTCACACCAGTATTGGTGTGTAAAGACCCCATTCGAACTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR TCA 90 bp GTTATGCTCATTAAATATTGTCATTGTAACACGGAATGGAAATCATaGTCCTTGCCCATGGGCACTGAGCTGAAAGAAAGAGGAACCTCA +
Preference number: 1 (lower is better)
Translates to: VMLIKYCHCNTEWKS*SLPMGTELKERGTS
Trigger: TGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAAGGATCATGATTTCCATTCCGTGTTACAATGACAATATTTAATGAGCATAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp GAACCGGGTTCCACTCAGACGTCCGACACTTCTCGCCAAGGGGCCAGCGCGGACCCTCCCGGGGACCTCTaGGAAGCCCTGTTTCTGCGC +
Preference number: 2 (lower is better)
Translates to: EPGSTQTSDTSRQGASADPPGDL*EALFLR
Trigger: GCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGG...GTCCGCGCTGGCCCCTTGGCGAGAAGTGTCGGACGTCTGAGTGGAACCCGGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
3UTR-3UTR GCA 90 bp GCCACGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGAGCCACACGAGCTCCTaGAGCCACGGCTGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: ATAASWLAQCPSTVARMWSHTSS*SHGCQL
Trigger: CAGCTGGCAGCCGTGGCTGCAGGAGCTCGTGTGGCT...CCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp CCACGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTGAAGAGAGAGAAGAGTaGGGTCCAGAGGCTGACTGG +
Preference number: 2 (lower is better)
Translates to: PRLPAGWPSVHPQLPGCGEEREE*GPEADW
Trigger: CCAGTCAGCCTCTGGACCTCACTCTTCTCTCTCTTC...ACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR GCA 90 bp CCACGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTCATGAACTCTTGGGGTaGCCTCAGAGACACTCGGCT +
Preference number: 2 (lower is better)
Translates to: PRLPAGWPSVHPQLPGCGHELLG*PQRHSA
Trigger: AGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATG...ACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp CTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTGGCGCAGACCAGGATGTTGGGTaGGTGGGCGTGCACTTCTCA +
Preference number: 2 (lower is better)
Translates to: LLGCPQRHSAGVYGFCGADQDVG*VGVHFS
Trigger: TGAGAAGTGCACGCCCACTCACCCAACATCCTGGTC...TGCGCCACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp GTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCCGAGGCTCTGCTTTTCCTCCCGGGGACCTCTaGGAAGCCCTGTTTCTGCGC +
Preference number: 2 (lower is better)
Translates to: VVDQRVEMDPGEIRGSAFPPGDL*EALFLR
Trigger: GCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGG...AAAAGCAGAGCCTCGGATCTCACCAGGATCCATTTCCACACGCTGGTCTACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569517.5
3UTR-3UTR CCA 90 bp TCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTGCCACGGCTGCCAGCTaGTTGGCCCAGTGTCCATCC +
Preference number: 2 (lower is better)
Translates to: SHEAFLETRMLGEWACTSATAAS*LAQCPS
Trigger: GGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGC...AGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp TCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTTCAGCCTGGGCCACGTaGACCTTTCACCAGCCAGCC +
Preference number: 2 (lower is better)
Translates to: SHEAFLETRMLGEWACTSSAWAT*TFHQPA
Trigger: GGCTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGA...AGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp CTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGGTCGTGAGAGAAGATaGATCGGTTGGCATGGGGAG +
Preference number: 2 (lower is better)
Translates to: LVGPVSIHSCQDVVDQRVGRERR*IGWHGE
Trigger: CTCCCCATGCCAACCGATTCATCTTCTCTCACGACC...CACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
3UTR-3UTR GCA 90 bp GGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTGGCGCAGGCCTGTCCTACTCAAGCTGCTaGCCACATCTGAAGGGATAC +
Preference number: 2 (lower is better)
Translates to: GCPQRHSAGVYGFCGAGLSYSSC*PHLKGY
Trigger: GTATCCCTTCAGATGTGGGCAGCAGCTTGAGTAGGA...CAGGCCTGCGCCACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
3UTR-3UTR GCA 90 bp GCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGTGGAGGTTACAACCCTaGAGCTTGCAGCCATGGTCG +
Preference number: 2 (lower is better)
Translates to: ASEWEVMNSWGALRDTRLWRLQP*SLQPWS
Trigger: CGACCATGGCTGCAAGCTGCAGGGTTGTAACCTCCA...CAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569693.5
3UTR-3UTR CCA 90 bp ATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCAGACTCGGCTGGTGTCTATaGTTTCTGTGGCGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: ILEPASEWEVMNSWGALRLGWCL*FLWRRP
Trigger: AGGCCTGCGCCACAGAAACCATAGACACCAGCCGAG...TCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp GCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCTCCAAAGCTAGGCAATaGAGTTCAGCCTGGGCCACG +
Preference number: 2 (lower is better)
Translates to: AFLETRMLGEWACTSQVGSKARQ*SSAWAT
Trigger: CGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGGA...GCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp AAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGCCTCTGGCCAGCTCTAGGTaGACTGGAATACCAGTGGGG +
Preference number: 2 (lower is better)
Translates to: KLGNEVQPGPREPFTSQPLASSR*TGIPVG
Trigger: CCCCACTGGTATTCCAGTTCACCTAGAGCTGGCCAG...AGGCTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp GCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCCCGAATGGGAAGTCATaGACTCTTGGGGTGCCCTCA +
Preference number: 2 (lower is better)
Translates to: AFLETRMLGEWACTSQVGPNGKS*TLGVPS
Trigger: TGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGG...GCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR GCA 90 bp GGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGACGGTTTAGCACAGGATaGAGAGGCTCAGGCAAGAAG +
Preference number: 2 (lower is better)
Translates to: GWPSVHPQLPGCGRPACGRFSTG*RGSGKK
Trigger: CTTCTTGCCTGAGCCTCTGCATCCTGTGCTAAACCG...TCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
3UTR-3UTR CCA 90 bp GGAAAGAGCAGCGGTGACGAACCGGGTTCCACTCAGACGTCCGACACTTCTCGCATGAATCGGTTGGCATaGGGAGCTTTTAACTGGCCC +
Preference number: 2 (lower is better)
Translates to: GKSSGDEPGSTQTSDTSRMNRLA*GAFNWP
Trigger: GGGCCAGTTAAAAGCTCCCCATGCCAACCGATTCAT...GCGAGAAGTGTCGGACGTCTGAGTGGAACCCGGTTCGTCACCGCTGCTCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR-3UTR TCA 90 bp GCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCCCATGGGCACTGAGCTaGAAGAAAGAGGAACCTCAC +
Preference number: 2 (lower is better)
Translates to: AFLETRMLGEWACTSQVGPWALS*KKEEPH
Trigger: GTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGG...GCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp GCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCCTTGCCCATGGGCACTaGGCTGAAAGAAAGAGGAAC +
Preference number: 2 (lower is better)
Translates to: AFLETRMLGEWACTSQVGLAHGH*AERKRN
Trigger: GTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAAG...GCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp CTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTGGCGCACAGACAACTGCAGAATaGAAGAGTCCCTCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: LLGCPQRHSAGVYGFCGAQTTAE*KSPSEA
Trigger: AGCCTCTGAGGGACTCTTTCATTCTGCAGTTGTCTG...TGCGCCACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp ATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTGCTGGCCAGCTCTAGGTaGACTGGAATACCAGTGGGG +
Preference number: 2 (lower is better)
Translates to: MNSWGALRDTRLVSMVSVLASSR*TGIPVG
Trigger: CCCCACTGGTATTCCAGTTCACCTAGAGCTGGCCAG...CACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp GCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGAGAAGAGGATGTCACTaGCCATGCCCACATCAGGAA +
Preference number: 2 (lower is better)
Translates to: ASEWEVMNSWGALRDTRLRRGCH*PCPHQE
Trigger: TTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCT...CAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp CAGGATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCCGAGGCTCTAAAGAAGAACCGGGATaGGAGAAAGGCGCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: QDVVDQRVEMDPGEIRGSKEEPG*EKGAEA
Trigger: GGCCTCTGCGCCTTTCTCTCATCCCGGTTCTTCTTT...AGAGCCTCGGATCTCACCAGGATCCATTTCCACACGCTGGTCTACCACATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569517.5
3UTR-3UTR GCA 90 bp TCCTTGCCCATGGGCACTGAGCTGAAAGAAAGAGGAACCTCACATGAGGCTTTCAGGCTCCCCAGCCCCTaGTGCCATCATAAAGCACGG +
Preference number: 2 (lower is better)
Translates to: SLPMGTELKERGTSHEAFRLPSP*CHHKAR
Trigger: CCGTGCTTTATGATGGCAGCAGGGGCTGGGGAGCCT...GAAAGCCTCATGTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR GCA 90 bp CTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAACATGAACTCTTGGGGTaGCCTCAGAGACACTCGGCT +
Preference number: 2 (lower is better)
Translates to: LETRMLGEWACTSQVGKEHELLG*PQRHSA
Trigger: AGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATG...TTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp GCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAGGATGTTGGGTGAGTaGGCGTGCACTTCTCAAGTG +
Preference number: 2 (lower is better)
Translates to: AFLETRMLGEWACTSQVGRMLGE*ACTSQV
Trigger: CACTTGAGAAGTGCACGCCCACTCACCCAACATCCT...GCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp CAGGATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCCGAGGCTCTCCGTTGGAGAGGTCGTaGGAGAAGATGAATCGGTTG +
Preference number: 2 (lower is better)
Translates to: QDVVDQRVEMDPGEIRGSPLERS*EKMNRL
Trigger: CAACCGATTCATCTTCTCTCACGACCTCTCCAACGG...AGAGCCTCGGATCTCACCAGGATCCATTTCCACACGCTGGTCTACCACATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
3UTR-3UTR TCA 90 bp ATAACAGCTCCTGTTCATTCAGCCCAAGGGAAGTCACCGCGGGAAAGACCTGCTGCGGGAAAGACCTGCTaGTGGACAATGCTGCTCATG +
Preference number: 2 (lower is better)
Translates to: ITAPVHSAQGKSPRERPAAGKTC*WTMLLM
Trigger: CATGAGCAGCATTGTCCATCAGCAGGTCTTTCCCGC...AGCAGGTCTTTCCCGCGGTGACTTCCCTTGGGCTGAATGAACAGGAGCTGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569517.5
ENST00000569534.5
3UTR-3UTR TCA 90 bp CATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGAGTGAGGTCCAGAGAAGAGAGAGAAGAGTaGGGTCCAGAGGCTGACTGG +
Preference number: 2 (lower is better)
Translates to: HAHIRNTVPGRERRVRSREEREE*GPEADW
Trigger: CCAGTCAGCCTCTGGACCTCACTCTTCTCTCTCTTC...TCTGGACCTCACTCTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR GCA 90 bp TCCTGCAGCCACGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGATGTTTTTATGGAGTTaGCAACAGGCTGGAATGTAC +
Preference number: 2 (lower is better)
Translates to: SCSHGCQLVGPVSIHSCQMFLWS*QQAGMY
Trigger: GTACATTCCAGCCTGTTGGCAACTCCATAAAAACAT...CTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGCTGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR GCA 90 bp ACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGAGTGAGGTTGGGTGAGTGGGCGTaGACTTCTCAAGTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: TDHAHIRNTVPGRERRVRLGEWA*TSQVGK
Trigger: CTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAA...CCTCACTCTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp CTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGGTCCAGAGGCTGACTaGGTGAGAAATAACAGCTCC +
Preference number: 2 (lower is better)
Translates to: LETRMLGEWACTSQVGKEGPEAD*VRNNSS
Trigger: GGAGCTGTTATTTCTCACCCAGTCAGCCTCTGGACC...TTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp CCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGACCAGCGTGTGGAAATaGATCCTGGTGAGATCCGAG +
Preference number: 2 (lower is better)
Translates to: PKLGNEVQPGPREPFTSQTSVWK*ILVRSE
Trigger: CTCGGATCTCACCAGGATCCATTTCCACACGCTGGT...CTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp TCCTTGCCCATGGGCACTGAGCTGAAAGAAAGAGGAACCTCACATGAGGCTTTCCTCGGCTGGTGTCTATaGTTTCTGTGGCGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: SLPMGTELKERGTSHEAFLGWCL*FLWRRP
Trigger: AGGCCTGCGCCACAGAAACCATAGACACCAGCCGAG...GAAAGCCTCATGTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp CCTTCGGCTGAAATGGCATCTCCAAGGCCTACAGTTCGAATGGGGTCTTTACACGCGGGAAAGACCTGCTaGTGGACAATGCTGCTCATG +
Preference number: 2 (lower is better)
Translates to: PSAEMASPRPTVRMGSLHAGKTC*WTMLLM
Trigger: CATGAGCAGCATTGTCCATCAGCAGGTCTTTCCCGC...GTGTAAAGACCCCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGCCGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569534.5
3UTR-3UTR TCA 90 bp GATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCCGAGGCTCTGCTCAGAGGCTGACTGGGTaGGAAATAACAGCTCCTGTT +
Preference number: 2 (lower is better)
Translates to: DVVDQRVEMDPGEIRGSAQRLTG*EITAPV
Trigger: AACAGGAGCTGTTATTTCTCACCCAGTCAGCCTCTG...AGCAGAGCCTCGGATCTCACCAGGATCCATTTCCACACGCTGGTCTACCACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp AGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGAAGAGAGAGAAGAGTaGGGTCCAGAGGCTGACTGG +
Preference number: 2 (lower is better)
Translates to: RMSLTMPTSGTPFQEEREEEREE*GPEADW
Trigger: CCAGTCAGCCTCTGGACCTCACTCTTCTCTCTCTTC...TTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp GCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCCATCAACACATGCATTaGCTCGGGATGAGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: AFLETRMLGEWACTSQVGHQHMH*LGMRER
Trigger: CCTTTCTCTCATCCCGAGTCAATGCATGTGTTGATG...GCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR-3UTR TCA 90 bp TTGCCCATGGGCACTGAGCTGAAAGAAAGAGGAACCTCACATGAGGCTTTCCTAGCTGCTGCCCACATCTaGAGGGATACAGTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: LPMGTELKERGTSHEAFLAAAHI*RDTVRC
Trigger: GCACCTCACTGTATCCCTTCAGATGTGGGCAGCAGC...TAGGAAAGCCTCATGTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
3UTR-3UTR GCA 90 bp CAAAGACATTGTCATCAAGAAGCTCATGTAGCTTTGGACCAACTGGACCGCAAAGAGAAGCCCTGTTTCTaGGCGGCTCCGCCCGACCTC +
Preference number: 2 (lower is better)
Translates to: QRHCHQEAHVALDQLDRKEKPCF*AAPPDL
Trigger: GAGGTCGGGCGGAGCCGCGCAGAAACAGGGCTTCTC...TTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATGTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
3UTR-3UTR CCA 90 bp GCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCCGTGCACTTCTCAAGTaGGCAAGGAAGAACTGCTTT +
Preference number: 2 (lower is better)
Translates to: AFLETRMLGEWACTSQVGRALLK*ARKNCF
Trigger: AAAGCAGTTCTTCCTTGCCCACTTGAGAAGTGCACG...GCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp CTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAATGAATCGGTTGGCATaGGGAGCTTTTAACTGGCCC +
Preference number: 2 (lower is better)
Translates to: LETRMLGEWACTSQVGKEMNRLA*GAFNWP
Trigger: GGGCCAGTTAAAAGCTCCCCATGCCAACCGATTCAT...TTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
3UTR-3UTR CCA 90 bp GGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGATGGGGATGTCAGAAATaGAGGTTACAACCTCCAAGA +
Preference number: 2 (lower is better)
Translates to: GWPSVHPQLPGCGRPACGWGCQK*RLQPPR
Trigger: TCTTGGAGGTTGTAACCTCCATTTCTGACATCCCCA...TCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
3UTR-3UTR CCA 90 bp CCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGGAAGTCATGAACTCTTaGGGTGCCCTCAGAGACACT +
Preference number: 2 (lower is better)
Translates to: PKLGNEVQPGPREPFTSQEVMNS*GALRDT
Trigger: AGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTC...CTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp TCCTTGCCCATGGGCACTGAGCTGAAAGAAAGAGGAACCTCACATGAGGCTTTCCTTGCCCATGGGCACTaGGCTGAAAGAAAGAGGAAC +
Preference number: 2 (lower is better)
Translates to: SLPMGTELKERGTSHEAFLAHGH*AERKRN
Trigger: GTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAAG...GAAAGCCTCATGTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp GATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGACTTGCCCATGGGCACTaGGCTGAAAGAAAGAGGAAC +
Preference number: 2 (lower is better)
Translates to: DVTDHAHIRNTVPGRERRLAHGH*AERKRN
Trigger: GTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAAG...TCTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp TCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTACGGAATGGAAATCATaGTCCTTGCCCATGGGCACT +
Preference number: 2 (lower is better)
Translates to: SHEAFLETRMLGEWACTSTEWKS*SLPMGT
Trigger: AGTGCCCATGGGCAAGGATCATGATTTCCATTCCGT...AGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp ACTTCCTGCAATGACTCTGGTGGAACAAAGACATTGTCATCAAGAAGCTCATGTCCTCCCGGGGACCTCTaGGAAGCCCTGTTTCTGCGC +
Preference number: 2 (lower is better)
Translates to: TSCNDSGGTKTLSSRSSCPPGDL*EALFLR
Trigger: GCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGG...ACATGAGCTTCTTGATGACAATGTCTTTGTTCCACCAGAGTCATTGCAGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562286.1
ENST00000567941.5
ENST00000569517.5
3UTR-3UTR GCA 90 bp CAACTGGACCGCAAAGAAGAACCTTTAAATCTGAGTTGGCTGCAAATTTCTGTCGAGAAGCCCTGTTTCTaGGCGGCTCCGCCCGACCTC +
Preference number: 2 (lower is better)
Translates to: QLDRKEEPLNLSWLQISVEKPCF*AAPPDL
Trigger: GAGGTCGGGCGGAGCCGCGCAGAAACAGGGCTTCTC...GACAGAAATTTGCAGCCAACTCAGATTTAAAGGTTCTTCTTTGCGGTCCAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562286.1
ENST00000567941.5
3UTR-3UTR GCA 90 bp CCTATAACCTATGGAGCCAGGACAGGAAAGCATGATCCTTCAGCTCATGACGCCCTGTCCTACTCAAGCTaGTGCCCACATCTGAAGGGA +
Preference number: 2 (lower is better)
Translates to: PITYGARTGKHDPSAHDALSYSS*CPHLKG
Trigger: TCCCTTCAGATGTGGGCAGCAGCTTGAGTAGGACAG...GGCGTCATGAGCTGAAGGATCATGCTTTCCTGTCCTGGCTCCATAGGTTATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
3UTR-3UTR CCA 90 bp GTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCCGAGGCTCTGCTTTTTATTCATGGCCCCGTTaGAGAGGTCGTGAGAGAAGA +
Preference number: 2 (lower is better)
Translates to: VVDQRVEMDPGEIRGSAFYSWPR*RGRERR
Trigger: TCTTCTCTCACGACCTCTCCAACGGGGCCATGAATA...AAAAGCAGAGCCTCGGATCTCACCAGGATCCATTTCCACACGCTGGTCTACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
3UTR-3UTR CCA 90 bp AAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGCCTGAACTGGAATACCAGTaGGGATGTCAGAAATGGAGG +
Preference number: 2 (lower is better)
Translates to: KLGNEVQPGPREPFTSQPELEYQ*GCQKWR
Trigger: CCTCCATTTCTGACATCCCCACTGGTATTCCAGTTC...AGGCTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp CCTATAACCTATGGAGCCAGGACAGGAAAGCATGATCCTTCAGCTCATGACGCCGGTCCAGAGGCTGACTaGGTGAGAAATAACAGCTCC +
Preference number: 2 (lower is better)
Translates to: PITYGARTGKHDPSAHDAGPEAD*VRNNSS
Trigger: GGAGCTGTTATTTCTCACCCAGTCAGCCTCTGGACC...GGCGTCATGAGCTGAAGGATCATGCTTTCCTGTCCTGGCTCCATAGGTTATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp GCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGAGGCTGGAATGTACCTaGTACAGTTTAATCTGCTTT +
Preference number: 2 (lower is better)
Translates to: ASEWEVMNSWGALRDTRLRLECT*YSLICF
Trigger: AAAGCAGATTAAACTGTATCAGGTACATTCCAGCCT...CAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp TCCTTGCCCATGGGCACTGAGCTGAAAGAAAGAGGAACCTCACATGAGGCTTTCAAGAGGAACCTCACATaGGGCTTTCCTAGAGACCAG +
Preference number: 2 (lower is better)
Translates to: SLPMGTELKERGTSHEAFKRNLT*GFPRDQ
Trigger: CTGGTCTCTAGGAAAGCCTCATGTGAGGTTCCTCTT...GAAAGCCTCATGTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp ATGGCATCTCCAAGGCCTACAGTTCGAATGGGGTCTTTACACACCAATACTGGTCCGAATGGGAAGTCATaGACTCTTGGGGTGCCCTCA +
Preference number: 2 (lower is better)
Translates to: MASPRPTVRMGSLHTNTGPNGKS*TLGVPS
Trigger: TGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGG...ACCAGTATTGGTGTGTAAAGACCCCATTCGAACTGTAGGCCTTGGAGATGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR GCA 90 bp GGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGAATGTTTTTATGGAGTTaGCAACAGGCTGGAATGTAC +
Preference number: 2 (lower is better)
Translates to: GWPSVHPQLPGCGRPACGMFLWS*QQAGMY
Trigger: GTACATTCCAGCCTGTTGGCAACTCCATAAAAACAT...TCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR GCA 90 bp TCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTAGGCTTCCAGACAACTaGAGAATGAAAGAGTCCCTC +
Preference number: 2 (lower is better)
Translates to: SHEAFLETRMLGEWACTSRLPDN*RMKESL
Trigger: GAGGGACTCTTTCATTCTGCAGTTGTCTGGAAGCCT...AGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR GCA 90 bp TTGCCCATGGGCACTGAGCTGAAAGAAAGAGGAACCTCACATGAGGCTTTCCTATACAACCCTGCAGCTTaGAGCCATGGTCGGTTTAGC +
Preference number: 2 (lower is better)
Translates to: LPMGTELKERGTSHEAFLYNPAA*SHGRFS
Trigger: GCTAAACCGACCATGGCTGCAAGCTGCAGGGTTGTA...TAGGAAAGCCTCATGTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
3UTR-3UTR CCA 90 bp TGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGAAATGAGTTGCCAACAGGCTaGAATGTACCTGATACAGTT +
Preference number: 2 (lower is better)
Translates to: WPSVHPQLPGCGRPACGNELPTG*NVPDTV
Trigger: AACTGTATCAGGTACATTCCAGCCTGTTGGCAACTC...ATTTCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp CAGGATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCCGAGGCTCTGAGTTGCCAACAGGCTaGAATGTACCTGATACAGTT +
Preference number: 2 (lower is better)
Translates to: QDVVDQRVEMDPGEIRGSELPTG*NVPDTV
Trigger: AACTGTATCAGGTACATTCCAGCCTGTTGGCAACTC...AGAGCCTCGGATCTCACCAGGATCCATTTCCACACGCTGGTCTACCACATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp ACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGAGTGAGGGAACTGGAATACCAGTaGGGATGTCAGAAATGGAGG +
Preference number: 2 (lower is better)
Translates to: TDHAHIRNTVPGRERRVRELEYQ*GCQKWR
Trigger: CCTCCATTTCTGACATCCCCACTGGTATTCCAGTTC...CCTCACTCTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp TGTTCTTTCAAGATCCAGAAGAGGATGTCACTGACCATGCCCACATCAGGAACACTCGGCTGGTGTCTATaGTTTCTGTGGCGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: CSFKIQKRMSLTMPTSGTLGWCL*FLWRRP
Trigger: AGGCCTGCGCCACAGAAACCATAGACACCAGCCGAG...TGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCTGGATCTTGAAAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp CCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGCAGGCTGGAATGTACCTaGTACAGTTTAATCTGCTTT +
Preference number: 2 (lower is better)
Translates to: PGCWVSGRALLKWARKNCRLECT*YSLICF
Trigger: AAAGCAGATTAAACTGTATCAGGTACATTCCAGCCT...GCAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp AATAGAAGAGTCCTTCGGCTGAAATGGCATCTCCAAGGCCTACAGTTCGAATGGCCATGGGCACTGAGCTaGAAGAAAGAGGAACCTCAC +
Preference number: 2 (lower is better)
Translates to: NRRVLRLKWHLQGLQFEWPWALS*KKEEPH
Trigger: GTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGG...CCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGCCGAAGGACTCTTCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp TCTGAAATGTTTTTATGGAGTTGCCAACAGGCTGGAATGTACCTGATACAGTTTCCTCCCGGGGACCTCTaGGAAGCCCTGTTTCTGCGC +
Preference number: 2 (lower is better)
Translates to: SEMFLWSCQQAGMYLIQFPPGDL*EALFLR
Trigger: GCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGG...AAACTGTATCAGGTACATTCCAGCCTGTTGGCAACTCCATAAAAACATTTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR-3UTR TCA 90 bp AAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGCCTTTCCAGATCATTCCTTaGATGCAGAATGCTGTGATC +
Preference number: 2 (lower is better)
Translates to: KLGNEVQPGPREPFTSQPFQIIP*MQNAVI
Trigger: GATCACAGCATTCTGCATTCAAGGAATGATCTGGAA...AGGCTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR-3UTR GCA 90 bp TCTGAAATGTTTTTATGGAGTTGCCAACAGGCTGGAATGTACCTGATACAGTTTTCCTGCAGCCACGGCTaGCAGCTGGTTGGCCCAGTG +
Preference number: 2 (lower is better)
Translates to: SEMFLWSCQQAGMYLIQFSCSHG*QLVGPV
Trigger: CACTGGGCCAACCAGCTGGCAGCCGTGGCTGCAGGA...AAACTGTATCAGGTACATTCCAGCCTGTTGGCAACTCCATAAAAACATTTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp ATGGCATCTCCAAGGCCTACAGTTCGAATGGGGTCTTTACACACCAATACTGGTAGGATGTTGGGTGAGTaGGCGTGCACTTCTCAAGTG +
Preference number: 2 (lower is better)
Translates to: MASPRPTVRMGSLHTNTGRMLGE*ACTSQV
Trigger: CACTTGAGAAGTGCACGCCCACTCACCCAACATCCT...ACCAGTATTGGTGTGTAAAGACCCCATTCGAACTGTAGGCCTTGGAGATGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR CAA 90 bp ACTCTGGTGGAACAAAGACATTGTCATCAAGAAGCTCATGTAGCTTaGGACCAACTGGACCGCAAAGAAGAACCGGGTTCCACTCAGACG +
Preference number: 2 (lower is better)
Translates to: TLVEQRHCHQEAHVA*DQLDRKEEPGSTQT
Trigger: CGTCTGAGTGGAACCCGGTTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATGTCTTTGTTCCACCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562823.1
3UTR-3UTR TCA 90 bp AACTGCTTTTCTCCAGCTGACATGCTCTCAGGGGTGAAGAAGTTTAGCTTAAAATGCATTGACTCGGGATaGGAGAAAGGCGCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: NCFSPADMLSGVKKFSLKCIDSG*EKGAEA
Trigger: GGCCTCTGCGCCTTTCTCTCATCCCGAGTCAATGCA...TTTTAAGCTAAACTTCTTCACCCCTGAGAGCATGTCAGCTGGAGAAAAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR-3UTR TCA 90 bp AATAGAAGAGTCCTTCGGCTGAAATGGCATCTCCAAGGCCTACAGTTCGAATGGCACTCCTCCCCTGCTTaGTACTCTAAAATGAGGTGG +
Preference number: 2 (lower is better)
Translates to: NRRVLRLKWHLQGLQFEWHSSPA*YSKMRW
Trigger: CCACCTCATTTTAGAGTATCAAGCAGGGGAGGAGTG...CCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGCCGAAGGACTCTTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR-3UTR GCA 90 bp AACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAAAGTCCTGCAGCCACGGCTaGCAGCTGGTTGGCCCAGTG +
Preference number: 2 (lower is better)
Translates to: NKFLEGSERTKISLYGRKSCSHG*QLVGPV
Trigger: CACTGGGCCAACCAGCTGGCAGCCGTGGCTGCAGGA...CTTTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR GCA 90 bp AACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAAAGAGCCACACGAGCTCCTaGAGCCACGGCTGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: NKFLEGSERTKISLYGRKSHTSS*SHGCQL
Trigger: CAGCTGGCAGCCGTGGCTGCAGGAGCTCGTGTGGCT...CTTTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp AATAGAAGAGTCCTTCGGCTGAAATGGCATCTCCAAGGCCTACAGTTCGAATGGTATTCATGGCCCCGTTaGAGAGGTCGTGAGAGAAGA +
Preference number: 2 (lower is better)
Translates to: NRRVLRLKWHLQGLQFEWYSWPR*RGRERR
Trigger: TCTTCTCTCACGACCTCTCCAACGGGGCCATGAATA...CCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGCCGAAGGACTCTTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
3UTR-3UTR CCA 90 bp AAAATTACCCCTAAGAATCTTCCTAATAGTGAGGGTGTACTTCCGAATAGAAGAGCCACGGCTGCCAGCTaGTTGGCCCAGTGTCCATCC +
Preference number: 2 (lower is better)
Translates to: KITPKNLPNSEGVLPNRRATAAS*LAQCPS
Trigger: GGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGC...TCTTCTATTCGGAAGTACACCCTCACTATTAGGAAGATTCTTAGGGGTAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp TCCTTGCCCATGGGCACTGAGCTGAAAGAAAGAGGAACCTCACATGAGGCTTTCGGCCTACAGTTCGAATaGGGTCTTTACACACCAATA +
Preference number: 2 (lower is better)
Translates to: SLPMGTELKERGTSHEAFGLQFE*GLYTPI
Trigger: TATTGGTGTGTAAAGACCCCATTCGAACTGTAGGCC...GAAAGCCTCATGTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp TTCTTTCAAGATCCAGAAGAGGATGTCACTGACCATGCCCACATCAGGAACACCTGGGGATGTCAGAAATaGAGGTTACAACCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: FFQDPEEDVTDHAHIRNTWGCQK*RLQPCS
Trigger: GCTGCAGGGTTGTAACCTCCATTTCTGACATCCCCA...GGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCTGGATCTTGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569693.5
3UTR CAA 90 bp AGTGGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTTGTTaGGGTTTAATACAATCCTGGAGCCTGCCTCCGAATGGGAAGTCA +
Preference number: 2 (lower is better)
Translates to: SGRIFPLCAILLLAC*GLIQSWSLPPNGKS
Trigger: TGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTATTAAACCCAAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR CAA 90 bp GTGAAGTGGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTaGTTTGGGTTTAATACAATCCTGGAGCCTGCCTCCGAATGGGAA +
Preference number: 2 (lower is better)
Translates to: VKWKDIPSLCHSTTG*FGFNTILEPASEWE
Trigger: TTCCCATTCGGAGGCAGGCTCCAGGATTGTATTAAACCCAAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp TTGCCCATGGGCACTGAGCTGAAAGAAAGAGGAACCTCACATGAGGCTTTCCTATGGGGATTTGGGAACTaGGTTTTTAGCTCTGTGACA +
Preference number: 2 (lower is better)
Translates to: LPMGTELKERGTSHEAFLWGFGN*VFSSVT
Trigger: TGTCACAGAGCTAAAAACTCAGTTCCCAAATCCCCA...TAGGAAAGCCTCATGTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR GCA 90 bp AAAACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAAAGCCACACGAGCTCCTaGAGCCACGGCTGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: KTNSLKAQNEQKSVFMAESHTSS*SHGCQL
Trigger: CAGCTGGCAGCCGTGGCTGCAGGAGCTCGTGTGGCT...TTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR GCA 90 bp TGTTCTTTCAAGATCCAGAAGAGGATGTCACTGACCATGCCCACATCAGGAACAGGCAAGAAGATGTTCTaGCCTGTCCTACTCAAGCTG +
Preference number: 2 (lower is better)
Translates to: CSFKIQKRMSLTMPTSGTGKKMF*PVLLKL
Trigger: CAGCTTGAGTAGGACAGGGCAGAACATCTTCTTGCC...TGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCTGGATCTTGAAAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
3UTR-3UTR CCA 90 bp AACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAAAGCGGCTGCCAGCTGGTTaGCCCAGTGTCCATCCACAG +
Preference number: 2 (lower is better)
Translates to: NKFLEGSERTKISLYGRKRLPAG*PSVHPQ
Trigger: CTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCG...CTTTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp CCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGTTTACACACCAATACTaGTGTGAAGTGGAAGGATAT +
Preference number: 2 (lower is better)
Translates to: PKLGNEVQPGPREPFTSQFTHQY*CEVEGY
Trigger: ATATCCTTCCACTTCACACCAGTATTGGTGTGTAAA...CTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp AAGAGTCCTTCGGCTGAAATGGCATCTCCAAGGCCTACAGTTCGAATGGGGTCTTACTCTAAAATGAGGTaGAACTCATCCACTTCCTGC +
Preference number: 2 (lower is better)
Translates to: KSPSAEMASPRPTVRMGSYSKMR*NSSTSC
Trigger: GCAGGAAGTGGATGAGTTCCACCTCATTTTAGAGTA...AGACCCCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGCCGAAGGACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR CAA 90 bp TGGAACTCATCCACTTCCTGCAATGACTCTGGTGGAACAAAGACATaGTCATCAAGAAGCTCATGTAGCTTTGGACCAACTGGACCGCAA +
Preference number: 2 (lower is better)
Translates to: WNSSTSCNDSGGTKT*SSRSSCSFGPTGPQ
Trigger: TTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATGTCTTTGTTCCACCAGAGTCATTGCAGGAAGTGGATGAGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562286.1
ENST00000567941.5
ENST00000569517.5
3UTR-3UTR GCA 90 bp CCTATAACCTATGGAGCCAGGACAGGAAAGCATGATCCTTCAGCTCATGACGCCATGTTTTTATGGAGTTaGCAACAGGCTGGAATGTAC +
Preference number: 2 (lower is better)
Translates to: PITYGARTGKHDPSAHDAMFLWS*QQAGMY
Trigger: GTACATTCCAGCCTGTTGGCAACTCCATAAAAACAT...GGCGTCATGAGCTGAAGGATCATGCTTTCCTGTCCTGGCTCCATAGGTTATAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp AAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGCCTAAAAATCAGTCTTTATaGCAGAAAGCACATCCAAAG +
Preference number: 2 (lower is better)
Translates to: KLGNEVQPGPREPFTSQPKNQSL*QKAHPK
Trigger: CTTTGGATGTGCTTTCTGCCATAAAGACTGATTTTT...AGGCTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp AATACTGGTGTGAAGTGGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCGAACTGGAATACCAGTaGGGATGTCAGAAATGGAGG +
Preference number: 2 (lower is better)
Translates to: NTGVKWKDIPSLCHSTTGELEYQ*GCQKWR
Trigger: CCTCCATTTCTGACATCCCCACTGGTATTCCAGTTC...GCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACTTCACACCAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp AAAACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAACGGCTGCCAGCTGGTTaGCCCAGTGTCCATCCACAG +
Preference number: 2 (lower is better)
Translates to: KTNSLKAQNEQKSVFMAERLPAG*PSVHPQ
Trigger: CTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCG...TTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp TCATTAAATATTGTCATTGTAACACGGAATGGAAATCATGATCCTTGCCCATGGGACCAGGATGTTGGGTaGGTGGGCGTGCACTTCTCA +
Preference number: 2 (lower is better)
Translates to: SLNIVIVTRNGNHDPCPWDQDVG*VGVHFS
Trigger: TGAGAAGTGCACGCCCACTCACCCAACATCCTGGTC...CCATGGGCAAGGATCATGATTTCCATTCCGTGTTACAATGACAATATTTAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR GCA 90 bp TCTCCAGCTGACATGCTCTCAGGGGTGAAGAAGTTTAGCTTAAAATACCTGATGAGGCTTCCAGACAACTaGAGAATGAAAGAGTCCCTC +
Preference number: 2 (lower is better)
Translates to: SPADMLSGVKKFSLKYLMRLPDN*RMKESL
Trigger: GAGGGACTCTTTCATTCTGCAGTTGTCTGGAAGCCT...CATCAGGTATTTTAAGCTAAACTTCTTCACCCCTGAGAGCATGTCAGCTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp AACTGCTTTTCTCCAGCTGACATGCTCTCAGGGGTGAAGAAGTTTAGCTTAAAAGAAGTCATGAACTCTTaGGGTGCCCTCAGAGACACT +
Preference number: 2 (lower is better)
Translates to: NCFSPADMLSGVKKFSLKEVMNS*GALRDT
Trigger: AGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTC...TTTTAAGCTAAACTTCTTCACCCCTGAGAGCATGTCAGCTGGAGAAAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp TCTCCAGCTGACATGCTCTCAGGGGTGAAGAAGTTTAGCTTAAAATACCTGATGGAGTTGCCAACAGGCTaGAATGTACCTGATACAGTT +
Preference number: 2 (lower is better)
Translates to: SPADMLSGVKKFSLKYLMELPTG*NVPDTV
Trigger: AACTGTATCAGGTACATTCCAGCCTGTTGGCAACTC...CATCAGGTATTTTAAGCTAAACTTCTTCACCCCTGAGAGCATGTCAGCTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp TTAAATATTGTCATTGTAACACGGAATGGAAATCATGATCCTTGCCCATGGGCAAGGATGTTGGGTGAGTaGGCGTGCACTTCTCAAGTG +
Preference number: 2 (lower is better)
Translates to: LNIVIVTRNGNHDPCPWARMLGE*ACTSQV
Trigger: CACTTGAGAAGTGCACGCCCACTCACCCAACATCCT...TGCCCATGGGCAAGGATCATGATTTCCATTCCGTGTTACAATGACAATATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR CAA 90 bp ACTCTGGTGGAACAAAGACATTGTCATCAAGAAGCTCATGTAGCTTaGGACCAACTGGACCGCAAAGAAGAACCTTTAAATCTGAGTTGG +
Preference number: 2 (lower is better)
Translates to: TLVEQRHCHQEAHVA*DQLDRKEEPLNLSW
Trigger: CCAACTCAGATTTAAAGGTTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATGTCTTTGTTCCACCAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562286.1
ENST00000567941.5
3UTR-3UTR TCA 90 bp TGTCATCAAGAAGCTCATGTAGCTTTGGACCAACTGGACCGCAAAGAAGAACCTAGGCTGGAATGTACCTaGTACAGTTTAATCTGCTTT +
Preference number: 2 (lower is better)
Translates to: CHQEAHVALDQLDRKEEPRLECT*YSLICF
Trigger: AAAGCAGATTAAACTGTATCAGGTACATTCCAGCCT...AGGTTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR-3UTR TCA 90 bp TCTGAAATGTTTTTATGGAGTTGCCAACAGGCTGGAATGTACCTGATACAGTTTAAGAGGAACCTCACATaGGGCTTTCCTAGAGACCAG +
Preference number: 2 (lower is better)
Translates to: SEMFLWSCQQAGMYLIQFKRNLT*GFPRDQ
Trigger: CTGGTCTCTAGGAAAGCCTCATGTGAGGTTCCTCTT...AAACTGTATCAGGTACATTCCAGCCTGTTGGCAACTCCATAAAAACATTTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp AAAATTACCCCTAAGAATCTTCCTAATAGTGAGGGTGTACTTCCGAATAGAAGAGGAAATGGATCCTGGTaGGATCCGAGGCTCTGCTTT +
Preference number: 2 (lower is better)
Translates to: KITPKNLPNSEGVLPNRRGNGSW*DPRLCF
Trigger: AAAGCAGAGCCTCGGATCTCACCAGGATCCATTTCC...TCTTCTATTCGGAAGTACACCCTCACTATTAGGAAGATTCTTAGGGGTAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR GCA 90 bp AGGTGGAACTCATCCACTTCCTGCAATGACTCTGGTGGAACAAAGACATTGTCAATGTTTTTATGGAGTTaGCAACAGGCTGGAATGTAC +
Preference number: 2 (lower is better)
Translates to: RWNSSTSCNDSGGTKTLSMFLWS*QQAGMY
Trigger: GTACATTCCAGCCTGTTGGCAACTCCATAAAAACAT...TGACAATGTCTTTGTTCCACCAGAGTCATTGCAGGAAGTGGATGAGTTCCACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR-3UTR TCA 90 bp AAAACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAAGGAAATGGATCCTGGTaGGATCCGAGGCTCTGCTTT +
Preference number: 2 (lower is better)
Translates to: KTNSLKAQNEQKSVFMAEGNGSW*DPRLCF
Trigger: AAAGCAGAGCCTCGGATCTCACCAGGATCCATTTCC...TTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp AAAACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAAGAAGTCATGAACTCTTaGGGTGCCCTCAGAGACACT +
Preference number: 2 (lower is better)
Translates to: KTNSLKAQNEQKSVFMAEEVMNS*GALRDT
Trigger: AGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTC...TTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp AAAACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAAGAGTTGCCAACAGGCTaGAATGTACCTGATACAGTT +
Preference number: 2 (lower is better)
Translates to: KTNSLKAQNEQKSVFMAEELPTG*NVPDTV
Trigger: AACTGTATCAGGTACATTCCAGCCTGTTGGCAACTC...TTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CCA 90 bp TCATTAAATATTGTCATTGTAACACGGAATGGAAATCATGATCCTTGCCCATGGAATACTGGTGTGAAGTaGAAGGATATTCCCTCTCTG +
Preference number: 2 (lower is better)
Translates to: SLNIVIVTRNGNHDPCPWNTGVK*KDIPSL
Trigger: CAGAGAGGGAATATCCTTCCACTTCACACCAGTATT...CCATGGGCAAGGATCATGATTTCCATTCCGTGTTACAATGACAATATTTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR TCA 90 bp AACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAAAGAGGCTGGAATGTACCTaGTACAGTTTAATCTGCTTT +
Preference number: 2 (lower is better)
Translates to: NKFLEGSERTKISLYGRKRLECT*YSLICF
Trigger: AAAGCAGATTAAACTGTATCAGGTACATTCCAGCCT...CTTTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR TCA 72 bp GGGCCAGCGCGGACAGCAGCGCCTCCCGGGGACCTCTaGGAAGCCCTGTTTCTGCGCGGCTCCGCCCGACCT +
Preference number: 3 (lower is better)
Translates to: GPARTAAPPGDL*EALFLRGSARP
Trigger: AGGTCGGGCGGAGCCGCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGGCGCTGCTGTCCGCGCTGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
3UTR GCA 72 bp CAGCGCCTCCCGGGGACCTCTGAGAAGCCCTGTTTCTaGGCGGCTCCGCCCGACCTCCAAGGCCGACCTCGG +
Preference number: 3 (lower is better)
Translates to: QRLPGTSEKPCF*AAPPDLQGRPR
Trigger: CCGAGGTCGGCCTTGGAGGTCGGGCGGAGCCGCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGGCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
3UTR GCA 72 bp TGTGGCGCAGGCCTGTGTCCCAGCCACACGAGCTCCTaGAGCCACGGCTGCCAGCTGGTTGGCCCAGTGTCC +
Preference number: 3 (lower is better)
Translates to: CGAGLCPSHTSS*SHGCQLVGPVS
Trigger: GGACACTGGGCCAACCAGCTGGCAGCCGTGGCTGCAGGAGCTCGTGTGGCTGGGACACAGGCCTGCGCCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR CCA 72 bp CCACACGAGCTCCTGCAGCCACGGCTGCCAGCTGGTTaGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGT +
Preference number: 3 (lower is better)
Translates to: PHELLQPRLPAG*PSVHPQLPGCG
Trigger: ACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGCTGCAGGAGCTCGTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR GCA 72 bp GGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTTaGCAGGATGTGGTAGACCAGCGTGTGGAAATGGAT +
Preference number: 3 (lower is better)
Translates to: GCQLVGPVSIHS*QDVVDQRVEMD
Trigger: ATCCATTTCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR CCA 72 bp CTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTaGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATG +
Preference number: 3 (lower is better)
Translates to: LEPASEWEVMNS*GALRDTRLVSM
Trigger: CATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR TCA 72 bp ATACAATCCTGGAGCCTGCCTCCGAATGGGAAGTCATaGACTCTTGGGGTGCCCTCAGAGACACTCGGCTGG +
Preference number: 3 (lower is better)
Translates to: IQSWSLPPNGKS*TLGVPSETLGW
Trigger: CCAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR GCA 72 bp CCTGCAGCTTGCAGCCATGGTCGGTTTAGCACAGGATaGAGAGGCTCAGGCAAGAAGATGTTCTGCCCTGTC +
Preference number: 3 (lower is better)
Translates to: PAACSHGRFSTG*RGSGKKMFCPV
Trigger: GACAGGGCAGAACATCTTCTTGCCTGAGCCTCTGCATCCTGTGCTAAACCGACCATGGCTGCAAGCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
3UTR-3UTR CAA 90 bp GCCACGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGCTACTACTGGCTTGTTaGGGTTTAATACAATCCTGG +
Preference number: 3 (lower is better)
Translates to: ATAASWLAQCPSTVARMWLLLAC*GLIQSW
Trigger: CCAGGATTGTATTAAACCCAAACAAGCCAGTAGTAG...CCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CAA 90 bp GATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCCGAGGCTCTGCTAGTGTCCATCCACAGTaGCCAGGATGTGGTAGACCA +
Preference number: 3 (lower is better)
Translates to: DVVDQRVEMDPGEIRGSASVHPQ*PGCGRP
Trigger: TGGTCTACCACATCCTGGCAACTGTGGATGGACACT...AGCAGAGCCTCGGATCTCACCAGGATCCATTTCCACACGCTGGTCTACCACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CAA 90 bp CCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGAGTGTCCATCCACAGTaGCCAGGATGTGGTAGACCA +
Preference number: 3 (lower is better)
Translates to: PKLGNEVQPGPREPFTSQSVHPQ*PGCGRP
Trigger: TGGTCTACCACATCCTGGCAACTGTGGATGGACACT...CTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR TCA 72 bp AGGACTAAGGCCAAGTGCCTGCAAGAGCTTCACCCCTaGGAGCACCACATCAACACATGCATTGACTCGGGA +
Preference number: 3 (lower is better)
Translates to: RTKAKCLQELHP*EHHINTCIDSG
Trigger: TCCCGAGTCAATGCATGTGTTGATGTGGTGCTCTCAGGGGTGAAGCTCTTGCAGGCACTTGGCCTTAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR GCA 72 bp AGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTaGTTTTCTCCAGCTGACATGCTCTCAGGGGTGAAG +
Preference number: 3 (lower is better)
Translates to: SGRALLKWARKN*FSPADMLSGVK
Trigger: CTTCACCCCTGAGAGCATGTCAGCTGGAGAAAAGCAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR GCA 72 bp AGCACAGGATGCAGAGGCTCAGGCAAGAAGATGTTCTaGCCTGTCCTACTCAAGCTGCTGCCCACATCTGAA +
Preference number: 3 (lower is better)
Translates to: STGCRGSGKKMF*PVLLKLLPTSE
Trigger: TTCAGATGTGGGCAGCAGCTTGAGTAGGACAGGGCAGAACATCTTCTTGCCTGAGCCTCTGCATCCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
3UTR CCA 72 bp CCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTaGGCAAGGAAGAACTGCTTTTCTCCAGCTGACATG +
Preference number: 3 (lower is better)
Translates to: PGCWVSGRALLK*ARKNCFSPADM
Trigger: CATGTCAGCTGGAGAAAAGCAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR CCA 72 bp CATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTaGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTG +
Preference number: 3 (lower is better)
Translates to: HEAFLETRMLGE*ACTSQVGKEEL
Trigger: CAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CAA 90 bp GGGAGGGATTGTTTTGTCCTTAGCGGCTCTGTCCTAAATTTGAGAGCAGGAGACCTAGAGACCAGGATGTaGGGTGAGTGGGCGTGCACT +
Preference number: 3 (lower is better)
Translates to: GRDCFVLSGSVLNLRAGDLETRM*GEWACT
Trigger: AGTGCACGCCCACTCACCCAACATCCTGGTCTCTAG...GTCTCCTGCTCTCAAATTTAGGACAGAGCCGCTAAGGACAAAACAATCCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR TCA 72 bp GGATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTaGGATCCGAGGCTCTGCTTTTACTCCTCCCATGTT +
Preference number: 3 (lower is better)
Translates to: GCGRPACGNGSW*DPRLCFYSSHV
Trigger: AACATGGGAGGAGTAAAAGCAGAGCCTCGGATCTCACCAGGATCCATTTCCACACGCTGGTCTACCACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
3UTR GCA 72 bp GCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTaGACTTCTCAAGTGGGCAAGGAAGAACTGCTTTTC +
Preference number: 3 (lower is better)
Translates to: AFLETRMLGEWA*TSQVGKEELLF
Trigger: GAAAAGCAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CAA 90 bp GGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCAGAGACACACCTTTAAATCTGAGTaGGCTGCAAATTTCTGTCCA +
Preference number: 3 (lower is better)
Translates to: GACLRMGSHELLGCPQRHTFKSE*AANFCP
Trigger: TGGACAGAAATTTGCAGCCAACTCAGATTTAAAGGT...GTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR TCA 72 bp GTGAGGGTGTACTTCCGAATAGAAGAGTCCTTCGGCTaGAATGGCATCTCCAAGGCCTACAGTTCGAATGGG +
Preference number: 3 (lower is better)
Translates to: VRVYFRIEESFG*NGISKAYSSNG
Trigger: CCCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGCCGAAGGACTCTTCTATTCGGAAGTACACCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR CCA 72 bp TTTGGGTTTAATACAATCCTGGAGCCTGCCTCCGAATaGGAAGTCATGAACTCTTGGGGTGCCCTCAGAGAC +
Preference number: 3 (lower is better)
Translates to: FGFNTILEPASE*EVMNSWGALRD
Trigger: GTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTATTAAACCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR TCA 72 bp ATGAGCTCCCTGTTAGTCATACTGGCCAGCTCTAGGTaGACTGGAATACCAGTGGGGATGTCAGAAATGGAG +
Preference number: 3 (lower is better)
Translates to: MSSLLVILASSR*TGIPVGMSEME
Trigger: CTCCATTTCTGACATCCCCACTGGTATTCCAGTTCACCTAGAGCTGGCCAGTATGACTAACAGGGAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
3UTR TCA 72 bp GCTCCTGGGAACTCTGATGCAACCTGGGCAATGTCGTaGAAAGTTTCCTTATCACTGAAGAAGCGCTCAGCA +
Preference number: 3 (lower is better)
Translates to: APGNSDATWAMS*KVSLSLKKRSA
Trigger: TGCTGAGCGCTTCTTCAGTGATAAGGAAACTTTTCACGACATTGCCCAGGTTGCATCAGAGTTCCCAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR TCA 72 bp ATTTCCTCCTACATAGTGCTGGGCTCCTGGGAACTCTaGTGCAACCTGGGCAATGTCGTGAAAAGTTTCCTT +
Preference number: 3 (lower is better)
Translates to: ISSYIVLGSWEL*CNLGNVVKSFL
Trigger: AAGGAAACTTTTCACGACATTGCCCAGGTTGCATCAGAGTTCCCAGGAGCCCAGCACTATGTAGGAGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR CCA 72 bp GCCTACAGTTCGAATGGGGTCTTTACACACCAATACTaGTGTGAAGTGGAAGGATATTCCCTCTCTGTGCCA +
Preference number: 3 (lower is better)
Translates to: AYSSNGVFTHQY*CEVEGYSLSVP
Trigger: TGGCACAGAGAGGGAATATCCTTCCACTTCACACCAGTATTGGTGTGTAAAGACCCCATTCGAACTGTAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CAA 90 bp TCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTAATGTTTTTATGGAGTaGCCAACAGGCTGGAATGTA +
Preference number: 3 (lower is better)
Translates to: SHEAFLETRMLGEWACTSNVFME*PTGWNV
Trigger: TACATTCCAGCCTGTTGGCAACTCCATAAAAACATT...AGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CAA 90 bp AACTGCTTTTCTCCAGCTGACATGCTCTCAGGGGTGAAGAAGTTTAGCTTAAAAACGGGAGGGATTGTTTaGTCCTTAGCGGCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: NCFSPADMLSGVKKFSLKTGGIV*SLAALS
Trigger: GGACAGAGCCGCTAAGGACAAAACAATCCCTCCCGT...TTTTAAGCTAAACTTCTTCACCCCTGAGAGCATGTCAGCTGGAGAAAAGCAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CAA 90 bp TCTGAAATGTTTTTATGGAGTTGCCAACAGGCTGGAATGTACCTGATACAGTTTCTAGAGACCAGGATGTaGGGTGAGTGGGCGTGCACT +
Preference number: 3 (lower is better)
Translates to: SEMFLWSCQQAGMYLIQFLETRM*GEWACT
Trigger: AGTGCACGCCCACTCACCCAACATCCTGGTCTCTAG...AAACTGTATCAGGTACATTCCAGCCTGTTGGCAACTCCATAAAAACATTTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR GCA 72 bp AAAAGTTTCCTTATCACTGAAGAAGCGCTCAGCAGCTaGTCCCTTCCCCATGAAGTGAATGAAGGCTTCTTC +
Preference number: 3 (lower is better)
Translates to: KSFLITEEALSS*SLPHEVNEGFF
Trigger: GAAGAAGCCTTCATTCACTTCATGGGGAAGGGAGCAGCTGCTGAGCGCTTCTTCAGTGATAAGGAAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR-3UTR CAA 90 bp GGGCTCCTGGGAACTCTGATGCAACCTGGGCAATGTCGTGAAAAGTTTCCTTATAATGTTTTTATGGAGTaGCCAACAGGCTGGAATGTA +
Preference number: 3 (lower is better)
Translates to: GLLGTLMQPGQCREKFPYNVFME*PTGWNV
Trigger: TACATTCCAGCCTGTTGGCAACTCCATAAAAACATT...ATAAGGAAACTTTTCACGACATTGCCCAGGTTGCATCAGAGTTCCCAGGAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR-3UTR CAA 90 bp AGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAACATTCTACTACTGGCTaGTTTGGGTTTAATACAATC +
Preference number: 3 (lower is better)
Translates to: RMSLTMPTSGTPFQEEREHSTTG*FGFNTI
Trigger: GATTGTATTAAACCCAAACAAGCCAGTAGTAGAATG...TTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR TCA 72 bp CAGTTCGAATGGGGTCTTTACACACCAATACTGGTGTaGAGTGGAAGGATATTCCCTCTCTGTGCCATTCTA +
Preference number: 3 (lower is better)
Translates to: QFEWGLYTPILV*SGRIFPLCAIL
Trigger: TAGAATGGCACAGAGAGGGAATATCCTTCCACTTCACACCAGTATTGGTGTGTAAAGACCCCATTCGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR CCA 72 bp CGAATGGGGTCTTTACACACCAATACTGGTGTGAAGTaGAAGGATATTCCCTCTCTGTGCCATTCTACTACT +
Preference number: 3 (lower is better)
Translates to: RMGSLHTNTGVK*KDIPSLCHSTT
Trigger: AGTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACTTCACACCAGTATTGGTGTGTAAAGACCCCATTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CAA 90 bp CATTGTCATCAAGAAGCTCATGTAGCTTTGGACCAACTGGACCGCAAAGAAGAAACATCAACACATGCATaGACTCGGGATGAGAGAAAG +
Preference number: 3 (lower is better)
Translates to: HCHQEAHVALDQLDRKEETSTHA*TRDERK
Trigger: CTTTCTCTCATCCCGAGTCAATGCATGTGTTGATGT...TTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR-3UTR CAA 90 bp AAAACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAAACGGGAGGGATTGTTTaGTCCTTAGCGGCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: KTNSLKAQNEQKSVFMAETGGIV*SLAALS
Trigger: GGACAGAGCCGCTAAGGACAAAACAATCCCTCCCGT...TTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CAA 90 bp AACTGCTTTTCTCCAGCTGACATGCTCTCAGGGGTGAAGAAGTTTAGCTTAAAACTACTACTGGCTTGTTaGGGTTTAATACAATCCTGG +
Preference number: 3 (lower is better)
Translates to: NCFSPADMLSGVKKFSLKLLLAC*GLIQSW
Trigger: CCAGGATTGTATTAAACCCAAACAAGCCAGTAGTAG...TTTTAAGCTAAACTTCTTCACCCCTGAGAGCATGTCAGCTGGAGAAAAGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR GCA 72 bp AATACTGGTGTGAAGTGGAAGGATATTCCCTCTCTGTaGCATTCTACTACTGGCTTGTTTGGGTTTAATACA +
Preference number: 3 (lower is better)
Translates to: NTGVKWKDIPSL*HSTTGLFGFNT
Trigger: TGTATTAAACCCAAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACTTCACACCAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR-3UTR CAA 90 bp GGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTTGTTTGGGTTTAATAAATGTTTTTATGGAGTaGCCAACAGGCTGGAATGTA +
Preference number: 3 (lower is better)
Translates to: GRIFPLCAILLLACLGLINVFME*PTGWNV
Trigger: TACATTCCAGCCTGTTGGCAACTCCATAAAAACATT...TATTAAACCCAAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR TCA 72 bp ATTAAATATTGTCATTGTAACACGGAATGGAAATCATaGTCCTTGCCCATGGGCACTGAGCTGAAAGAAAGA +
Preference number: 3 (lower is better)
Translates to: IKYCHCNTEWKS*SLPMGTELKER
Trigger: TCTTTCTTTCAGCTCAGTGCCCATGGGCAAGGATCATGATTTCCATTCCGTGTTACAATGACAATATTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp TCTGCGCGGCTCCGCCCGACCTCCAAGGCCGACCTCGGAGGCTCAGAGACCCAGTGGCACTCACCCCACTaGCACGCGGCGCCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: SARLRPTSKADLGGSETQWHSPH*HAAPAP
Trigger: CGGCGCTGGCGCCGCGTGGCAGTGGGGTGAGTGCCA...CTGGGTCTCTGAGCCTCCGAGGTCGGCCTTGGAGGTCGGGCGGAGCCGCGCAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS-3UTR GCA 90 bp TTCTGCGCGGCTCCGCCCGACCTCCAAGGCCGACCTCGGAGGCTCAGAGACCCAAAGCGCGTCCCAGGCTaGCGCCAACCGGCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: FCAAPPDLQGRPRRLRDPKRVPG*RQPALG
Trigger: CCCGAGGGCCGGTTGGCGGCAGCCTGGGACGCGCTT...TGGGTCTCTGAGCCTCCGAGGTCGGCCTTGGAGGTCGGGCGGAGCCGCGCAGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS-3UTR TCA 90 bp AGCGCGGACAGCAGCGCCTCCCGGGGACCTCTGAGAAGCCCTGTTTCTGCGCGGCCTCCCGGGGACCTCTaGGAAGCCCTGTTTCTGCGC +
Preference number: 4 (lower is better)
Translates to: SADSSASRGPLRSPVSARPPGDL*EALFLR
Trigger: GCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGG...CCGCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGGCGCTGCTGTCCGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS-3UTR CCA 90 bp TTCTGCGCGGCTCCGCCCGACCTCCAAGGCCGACCTCGGAGGCTCAGAGACCCACGAGCCTGGCAGCTCTaGCTCCAGCAGGAAGACGCA +
Preference number: 4 (lower is better)
Translates to: FCAAPPDLQGRPRRLRDPRAWQL*LQQEDA
Trigger: TGCGTCTTCCTGCTGGAGCCAGAGCTGCCAGGCTCG...TGGGTCTCTGAGCCTCCGAGGTCGGCCTTGGAGGTCGGGCGGAGCCGCGCAGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS-3UTR CCA 90 bp CAGCCGAGTGGAAAGAGCAGCGGTGACGAACCGGGTTCCACTCAGACGTCCGACGCGCCAGCGCCGGACTaGCCGCACGATAAGCGCGTC +
Preference number: 4 (lower is better)
Translates to: QPSGKSSGDEPGSTQTSDAPAPD*PHDKRV
Trigger: GACGCGCTTATCGTGCGGCCAGTCCGGCGCTGGCGC...GTCGGACGTCTGAGTGGAACCCGGTTCGTCACCGCTGCTCTTTCCACTCGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562286.1
ENST00000567941.5
ENST00000569517.5
CDS-3UTR TCA 90 bp GGACAGCAGCGCCTCCCGGGGACCTCTGAGAAGCCCTGTTTCTGCGCGGCTCCGTGGAAAGAGCAGCGGTaGCGAACCGGGTTCCACTCA +
Preference number: 4 (lower is better)
Translates to: GQQRLPGTSEKPCFCAAPWKEQR*RTGFHS
Trigger: TGAGTGGAACCCGGTTCGTCACCGCTGCTCTTTCCA...CGGAGCCGCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGGCGCTGCTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562286.1
ENST00000567941.5
ENST00000569517.5
CDS-3UTR GCA 90 bp CCCTGTTTCTGCGCGGCTCCGCCCGACCTCCAAGGCCGACCTCGGAGGCTCAGAGAAGCGCTCAGCAGCTaGTCCCTTCCCCATGAAGTG +
Preference number: 4 (lower is better)
Translates to: PCFCAAPPDLQGRPRRLREALSS*SLPHEV
Trigger: CACTTCATGGGGAAGGGAGCAGCTGCTGAGCGCTTC...TCTGAGCCTCCGAGGTCGGCCTTGGAGGTCGGGCGGAGCCGCGCAGAAACAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR TCA 90 bp CAGACGTCCGACACTTCTCGCCAAGGGGCCAGCGCGGACAGCAGCGCCTCCCGGCAAGAGCTTCACCCCTaGGAGCACCACATCAACACA +
Preference number: 4 (lower is better)
Translates to: QTSDTSRQGASADSSASRQELHP*EHHINT
Trigger: TGTGTTGATGTGGTGCTCTCAGGGGTGAAGCTCTTG...CCGGGAGGCGCTGCTGTCCGCGCTGGCCCCTTGGCGAGAAGTGTCGGACGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR TCA 90 bp TGTTTCTGCGCGGCTCCGCCCGACCTCCAAGGCCGACCTCGGAGGCTCAGAGACGACCAGGATGTTGGGTaGGTGGGCGTGCACTTCTCA +
Preference number: 4 (lower is better)
Translates to: CFCAAPPDLQGRPRRLRDDQDVG*VGVHFS
Trigger: TGAGAAGTGCACGCCCACTCACCCAACATCCTGGTC...GTCTCTGAGCCTCCGAGGTCGGCCTTGGAGGTCGGGCGGAGCCGCGCAGAAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR TCA 90 bp CACTCAGACGTCCGACACTTCTCGCCAAGGGGCCAGCGCGGACAGCAGCGCCTCCTACATAGTGCGGGATaGGAGAAAGGCGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: HSDVRHFSPRGQRGQQRLLHSAG*EKGAEA
Trigger: GGCCTCTGCGCCTTTCTCTCATCCCGCACTATGTAG...GAGGCGCTGCTGTCCGCGCTGGCCCCTTGGCGAGAAGTGTCGGACGTCTGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562286.1
CDS-3UTR GCA 90 bp GCAGAGGCCAGCCGAGTGGAAAGAGCAGCGGTGACGAACCGGGTTCCACTCAGAGAGAAGCCCTGTTTCTaGGCGGCTCCGCCCGACCTC +
Preference number: 4 (lower is better)
Translates to: AEASRVERAAVTNRVPLREKPCF*AAPPDL
Trigger: GAGGTCGGGCGGAGCCGCGCAGAAACAGGGCTTCTC...TCTGAGTGGAACCCGGTTCGTCACCGCTGCTCTTTCCACTCGGCTGGCCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562286.1
ENST00000567941.5
ENST00000569517.5
CDS-3UTR CCA 90 bp CAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGCGCCAGCGCCGGACTaGCCGCACGATAAGCGCGTC +
Preference number: 4 (lower is better)
Translates to: QLVGPVSIHSCQDVVDQRAPAPD*PHDKRV
Trigger: GACGCGCTTATCGTGCGGCCAGTCCGGCGCTGGCGC...ACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
CDS-3UTR CCA 90 bp GCCTCCCGGGGACCTCTGAGAAGCCCTGTTTCTGCGCGGCTCCGCCCGACCTCCACCAGCGTGTGGAAATaGATCCTGGTGAGATCCGAG +
Preference number: 4 (lower is better)
Translates to: ASRGPLRSPVSARLRPTSTSVWK*ILVRSE
Trigger: CTCGGATCTCACCAGGATCCATTTCCACACGCTGGT...GGAGGTCGGGCGGAGCCGCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569517.5
CDS-3UTR TCA 90 bp GCCTCCCGGGGACCTCTGAGAAGCCCTGTTTCTGCGCGGCTCCGCCCGACCTCCCAGAGGCTGACTGGGTaGGAAATAACAGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: ASRGPLRSPVSARLRPTSQRLTG*EITAPV
Trigger: AACAGGAGCTGTTATTTCTCACCCAGTCAGCCTCTG...GGAGGTCGGGCGGAGCCGCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569517.5
CDS-3UTR TCA 90 bp CACTCAGACGTCCGACACTTCTCGCCAAGGGGCCAGCGCGGACAGCAGCGCCTCGAAGAGTCCTTCGGCTaGAATGGCATCTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: HSDVRHFSPRGQRGQQRLEESFG*NGISKA
Trigger: GGCCTTGGAGATGCCATTTCAGCCGAAGGACTCTTC...GAGGCGCTGCTGTCCGCGCTGGCCCCTTGGCGAGAAGTGTCGGACGTCTGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR GCA 90 bp AGACGTCCGACACTTCTCGCCAAGGGGCCAGCGCGGACAGCAGCGCCTCCCGGGTACAATCCTGGAGCCTaGCTCCGAATGGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: RRPTLLAKGPARTAAPPGYNPGA*LRMGSH
Trigger: ATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTA...CCCGGGAGGCGCTGCTGTCCGCGCTGGCCCCTTGGCGAGAAGTGTCGGACGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR GCA 90 bp GCCACGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGAGGCTCCCCAGCCCCTaGTGCCATCATAAAGCACGG +
Preference number: 4 (lower is better)
Translates to: ATAASWLAQCPSTVARMWRLPSP*CHHKAR
Trigger: CCGTGCTTTATGATGGCAGCAGGGGCTGGGGAGCCT...CCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp GCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCGCGCCAGCGCCGGACTaGCCGCACGATAAGCGCGTC +
Preference number: 4 (lower is better)
Translates to: AFLETRMLGEWACTSQVGAPAPD*PHDKRV
Trigger: GACGCGCTTATCGTGCGGCCAGTCCGGCGCTGGCGC...GCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
CDS-3UTR CCA 90 bp AGCGCGGACAGCAGCGCCTCCCGGGGACCTCTGAGAAGCCCTGTTTCTGCGCGGACCAGCGTGTGGAAATaGATCCTGGTGAGATCCGAG +
Preference number: 4 (lower is better)
Translates to: SADSSASRGPLRSPVSARTSVWK*ILVRSE
Trigger: CTCGGATCTCACCAGGATCCATTTCCACACGCTGGT...CCGCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGGCGCTGCTGTCCGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569517.5
CDS-3UTR CCA 90 bp TCTGCGCGGCTCCGCCCGACCTCCAAGGCCGACCTCGGAGGCTCAGAGACCCAGTCAGAGACACTCGGCTaGTGTCTATGGTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SARLRPTSKADLGGSETQSETLG*CLWFLW
Trigger: CCACAGAAACCATAGACACCAGCCGAGTGTCTCTGA...CTGGGTCTCTGAGCCTCCGAGGTCGGCCTTGGAGGTCGGGCGGAGCCGCGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR TCA 90 bp AACCGGGTTCCACTCAGACGTCCGACACTTCTCGCCAAGGGGCCAGCGCGGACACTGGCCAGCTCTAGGTaGACTGGAATACCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: NRVPLRRPTLLAKGPARTLASSR*TGIPVG
Trigger: CCCCACTGGTATTCCAGTTCACCTAGAGCTGGCCAG...TGTCCGCGCTGGCCCCTTGGCGAGAAGTGTCGGACGTCTGAGTGGAACCCGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569517.5
CDS-3UTR TCA 90 bp GGACAGCAGCGCCTCCCGGGGACCTCTGAGAAGCCCTGTTTCTGCGCGGCTCCGCAGACAACTGCAGAATaGAAGAGTCCCTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GQQRLPGTSEKPCFCAAPQTTAE*KSPSEA
Trigger: AGCCTCTGAGGGACTCTTTCATTCTGCAGTTGTCTG...CGGAGCCGCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGGCGCTGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR GCA 90 bp GGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCAGAGACACCCCAGGCGCCGCACCTaGGCGAACCAACTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GACLRMGSHELLGCPQRHPRRRT*ANQLLS
Trigger: GGAAAGGAGTTGGTTCGCGCAGGTGCGGCGCCTGGG...GTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569534.5
CDS-3UTR GCA 90 bp CTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGTCCTGCAGCCACGGCTaGCAGCTGGTTGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LVGPVSIHSCQDVVDQRVSCSHG*QLVGPV
Trigger: CACTGGGCCAACCAGCTGGCAGCCGTGGCTGCAGGA...CACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp CCACGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGGCTCCCCAGCCCCTaGTGCCATCATAAAGCACGG +
Preference number: 4 (lower is better)
Translates to: PRLPAGWPSVHPQLPGCGRLPSP*CHHKAR
Trigger: CCGTGCTTTATGATGGCAGCAGGGGCTGGGGAGCCT...ACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp CAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGAGAAGCCCTGTTTCTaGGCGGCTCCGCCCGACCTC +
Preference number: 4 (lower is better)
Translates to: QLVGPVSIHSCQDVVDQREKPCF*AAPPDL
Trigger: GAGGTCGGGCGGAGCCGCGCAGAAACAGGGCTTCTC...ACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569517.5
CDS-3UTR CCA 90 bp AGAGGAACCTCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGGCGCCAGCGCCGGACTaGCCGCACGATAAGCGCGTC +
Preference number: 4 (lower is better)
Translates to: RGTSHEAFLETRMLGEWAAPAPD*PHDKRV
Trigger: GACGCGCTTATCGTGCGGCCAGTCCGGCGCTGGCGC...CGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGAGGTTCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
CDS-3UTR CCA 90 bp CAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGCCACGGCTGCCAGCTaGTTGGCCCAGTGTCCATCC +
Preference number: 4 (lower is better)
Translates to: QLVGPVSIHSCQDVVDQRATAAS*LAQCPS
Trigger: GGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGC...ACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp ACTCAGACGTCCGACACTTCTCGCCAAGGGGCCAGCGCGGACAGCAGCGCCTCCGAGCCTGCCTCCGAATaGGAAGTCATGAACTCTTGG +
Preference number: 4 (lower is better)
Translates to: TQTSDTSRQGASADSSASEPASE*EVMNSW
Trigger: CCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTC...GGAGGCGCTGCTGTCCGCGCTGGCCCCTTGGCGAGAAGTGTCGGACGTCTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR TCA 90 bp CTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGTCAGCCTGGGCCACGTaGACCTTTCACCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LVGPVSIHSCQDVVDQRVSAWAT*TFHQPA
Trigger: GGCTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGA...CACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp GAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGTGCATTGACTCCCACTaGCACGCGGCGCCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: EAFLETRMLGEWACTSQVCIDSH*HAAPAP
Trigger: CGGCGCTGGCGCCGCGTGGCAGTGGGAGTCAATGCA...CACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311669.12
CDS-3UTR GCA 90 bp GACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGAGTGAGGTCCTGCATTGACTCCCACTaGCACGCGGCGCCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: DHAHIRNTVPGRERRVRSCIDSH*HAAPAP
Trigger: CGGCGCTGGCGCCGCGTGGCAGTGGGAGTCAATGCA...GGACCTCACTCTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563907.5
CDS-3UTR GCA 90 bp GCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCTCCTGCAGCCACGGCTaGCAGCTGGTTGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: AFLETRMLGEWACTSQVGSCSHG*QLVGPV
Trigger: CACTGGGCCAACCAGCTGGCAGCCGTGGCTGCAGGA...GCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp CAGGAACACCGTTCCAGGAAGAGAGAGAAGAGTGAGGTCCAGAGGCTGACTGGGAGCCACACGAGCTCCTaGAGCCACGGCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QEHRSRKREKSEVQRLTGSHTSS*SHGCQL
Trigger: CAGCTGGCAGCCGTGGCTGCAGGAGCTCGTGTGGCT...CCCAGTCAGCCTCTGGACCTCACTCTTCTCTCTCTTCCTGGAACGGTGTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp AAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGATGGCACTCACCCCACTaGCACGCGGCGCCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: KRMSLTMPTSGTPFQEERWHSPH*HAAPAP
Trigger: CGGCGCTGGCGCCGCGTGGCAGTGGGGTGAGTGCCA...TCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569517.5
CDS-3UTR TCA 90 bp GAACCGGGTTCCACTCAGACGTCCGACACTTCTCGCCAAGGGGCCAGCGCGGACAGAAGAGGATGTCACTaGCCATGCCCACATCAGGAA +
Preference number: 4 (lower is better)
Translates to: EPGSTQTSDTSRQGASADRRGCH*PCPHQE
Trigger: TTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCT...GTCCGCGCTGGCCCCTTGGCGAGAAGTGTCGGACGTCTGAGTGGAACCCGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569517.5
CDS-3UTR TCA 90 bp GCCACGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGGGAAATGGATCCTGGTaGGATCCGAGGCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: ATAASWLAQCPSTVARMWGNGSW*DPRLCF
Trigger: AAAGCAGAGCCTCGGATCTCACCAGGATCCATTTCC...CCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp GCCTCCCGGGGACCTCTGAGAAGCCCTGTTTCTGCGCGGCTCCGCCCGACCTCCAGGTTACAACCTGCTTaGTACTCTAAAATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ASRGPLRSPVSARLRPTSRLQPA*YSKMRW
Trigger: CCACCTCATTTTAGAGTATCAAGCAGGTTGTAACCT...GGAGGTCGGGCGGAGCCGCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569517.5
CDS-3UTR GCA 90 bp GGGAGGGATTGTTTTGTCCTTAGCGGCTCTGTCCTAAATTTGAGAGCAGGAGACAAGCGCGTCCCAGGCTaGCGCCAACCGGCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: GRDCFVLSGSVLNLRAGDKRVPG*RQPALG
Trigger: CCCGAGGGCCGGTTGGCGGCAGCCTGGGACGCGCTT...GTCTCCTGCTCTCAAATTTAGGACAGAGCCGCTAAGGACAAAACAATCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
CDS-3UTR GCA 90 bp CTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAAGCCACACGAGCTCCTaGAGCCACGGCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LETRMLGEWACTSQVGKESHTSS*SHGCQL
Trigger: CAGCTGGCAGCCGTGGCTGCAGGAGCTCGTGTGGCT...TTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp CCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGAGCCACACGAGCTCCTaGAGCCACGGCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PKLGNEVQPGPREPFTSQSHTSS*SHGCQL
Trigger: CAGCTGGCAGCCGTGGCTGCAGGAGCTCGTGTGGCT...CTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp ATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCAGACGAGCCTGGCAGCTCTaGCTCCAGCAGGAAGACGCA +
Preference number: 4 (lower is better)
Translates to: ILEPASEWEVMNSWGALRRAWQL*LQQEDA
Trigger: TGCGTCTTCCTGCTGGAGCCAGAGCTGCCAGGCTCG...TCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
CDS-3UTR CCA 90 bp ACGAACCGGGTTCCACTCAGACGTCCGACACTTCTCGCCAAGGGGCCAGCGCGGTATTCATGGCCCCGTTaGAGAGGTCGTGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: TNRVPLRRPTLLAKGPARYSWPR*RGRERR
Trigger: TCTTCTCTCACGACCTCTCCAACGGGGCCATGAATA...CCGCGCTGGCCCCTTGGCGAGAAGTGTCGGACGTCTGAGTGGAACCCGGTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR CCA 90 bp ACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGGCCACGGCTGCCAGCTaGTTGGCCCAGTGTCCATCC +
Preference number: 4 (lower is better)
Translates to: TRMLGEWACTSQVGKEELATAAS*LAQCPS
Trigger: GGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGC...CAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp GGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTGGCGCAGGCCTGTGTCTATGGTTTCTGTaGCGCAGGCCTGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GCPQRHSAGVYGFCGAGLCLWFL*RRPVSQ
Trigger: CTGGGACACAGGCCTGCGCCACAGAAACCATAGACA...CAGGCCTGCGCCACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp ACGAACCGGGTTCCACTCAGACGTCCGACACTTCTCGCCAAGGGGCCAGCGCGGGGTTTAATACAATCCTaGAGCCTGCCTCCGAATGGG +
Preference number: 4 (lower is better)
Translates to: TNRVPLRRPTLLAKGPARGLIQS*SLPPNG
Trigger: CCCATTCGGAGGCAGGCTCCAGGATTGTATTAAACC...CCGCGCTGGCCCCTTGGCGAGAAGTGTCGGACGTCTGAGTGGAACCCGGTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567941.5
3UTR CAA 72 bp CGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTaGCCAGGATGTGGTAGACCAGCGTGTGGAAATGGA +
Preference number: 4 (lower is better)
Translates to: RLPAGWPSVHPQ*PGCGRPACGNG
Trigger: TCCATTTCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CAGCCGAGTGGAAAGAGCAGCGGTGACGAACCGGGTTCCACTCAGACGTCCGACCCGTTGGAGAGGTCGTaGGAGAAGATGAATCGGTTG +
Preference number: 4 (lower is better)
Translates to: QPSGKSSGDEPGSTQTSDPLERS*EKMNRL
Trigger: CAACCGATTCATCTTCTCTCACGACCTCTCCAACGG...GTCGGACGTCTGAGTGGAACCCGGTTCGTCACCGCTGCTCTTTCCACTCGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR TCA 90 bp GGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCAGAGACACCTGGCCAGCTCTAGGTaGACTGGAATACCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GACLRMGSHELLGCPQRHLASSR*TGIPVG
Trigger: CCCCACTGGTATTCCAGTTCACCTAGAGCTGGCCAG...GTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGTCAGCCTGGGCCACGTaGACCTTTCACCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PKLGNEVQPGPREPFTSQSAWAT*TFHQPA
Trigger: GGCTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGA...CTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp CATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGAGTGAGGTCCAGATCCTGCAGCCACGGCTaGCAGCTGGTTGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: HAHIRNTVPGRERRVRSRSCSHG*QLVGPV
Trigger: CACTGGGCCAACCAGCTGGCAGCCGTGGCTGCAGGA...TCTGGACCTCACTCTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp GTCATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTAGCCACACGAGCTCCTaGAGCCACGGCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VMNSWGALRDTRLVSMVSSHTSS*SHGCQL
Trigger: CAGCTGGCAGCCGTGGCTGCAGGAGCTCGTGTGGCT...AGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp GCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAGGCTCCCCAGCCCCTaGTGCCATCATAAAGCACGG +
Preference number: 4 (lower is better)
Translates to: AFLETRMLGEWACTSQVGRLPSP*CHHKAR
Trigger: CCGTGCTTTATGATGGCAGCAGGGGCTGGGGAGCCT...GCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp AATAGAAGAGTCCTTCGGCTGAAATGGCATCTCCAAGGCCTACAGTTCGAATGGTGGCACTCACCCCACTaGCACGCGGCGCCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: NRRVLRLKWHLQGLQFEWWHSPH*HAAPAP
Trigger: CGGCGCTGGCGCCGCGTGGCAGTGGGGTGAGTGCCA...CCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGCCGAAGGACTCTTCTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR CCA 90 bp AAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGCCTCGGCTGCCAGCTGGTTaGCCCAGTGTCCATCCACAG +
Preference number: 4 (lower is better)
Translates to: KLGNEVQPGPREPFTSQPRLPAG*PSVHPQ
Trigger: CTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCG...AGGCTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp GCTCCTGTTCATTCAGCCCAAGGGAAGTCACCGCGGGAAAGACCTGATGGACAACGGCTGCCAGCTGGTTaGCCCAGTGTCCATCCACAG +
Preference number: 4 (lower is better)
Translates to: APVHSAQGKSPRERPDGQRLPAG*PSVHPQ
Trigger: CTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCG...TTGTCCATCAGGTCTTTCCCGCGGTGACTTCCCTTGGGCTGAATGAACAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569693.5
CDS-3UTR CCA 90 bp GGAAAGAGCAGCGGTGACGAACCGGGTTCCACTCAGACGTCCGACACTTCTCGCTGTCTATGGTTTCTGTaGCGCAGGCCTGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GKSSGDEPGSTQTSDTSRCLWFL*RRPVSQ
Trigger: CTGGGACACAGGCCTGCGCCACAGAAACCATAGACA...GCGAGAAGTGTCGGACGTCTGAGTGGAACCCGGTTCGTCACCGCTGCTCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR TCA 90 bp GCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGGAAGAGAGAGAAGAGTaGGGTCCAGAGGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: ASEWEVMNSWGALRDTRLEEREE*GPEADW
Trigger: CCAGTCAGCCTCTGGACCTCACTCTTCTCTCTCTTC...CAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CCACGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGAAGAGGATGTCACTaGCCATGCCCACATCAGGAA +
Preference number: 4 (lower is better)
Translates to: PRLPAGWPSVHPQLPGCGRRGCH*PCPHQE
Trigger: TTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCT...ACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CGGGGACCTCTGAGAAGCCCTGTTTCTGCGCGGCTCCGCCCGACCTCCAAGGCCAGGCTGGAATGTACCTaGTACAGTTTAATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RGPLRSPVSARLRPTSKARLECT*YSLICF
Trigger: AAAGCAGATTAAACTGTATCAGGTACATTCCAGCCT...GGCCTTGGAGGTCGGGCGGAGCCGCGCAGAAACAGGGCTTCTCAGAGGTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR TCA 90 bp GCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGGCGGGAAAGACCTGCTaGTGGACAATGCTGCTCATG +
Preference number: 4 (lower is better)
Translates to: ASEWEVMNSWGALRDTRLAGKTC*WTMLLM
Trigger: CATGAGCAGCATTGTCCATCAGCAGGTCTTTCCCGC...CAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569534.5
CDS-3UTR TCA 90 bp CAAGATCCAGAAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCACCTCCCGGGGACCTCTaGGAAGCCCTGTTTCTGCGC +
Preference number: 4 (lower is better)
Translates to: QDPEEDVTDHAHIRNTVPPPGDL*EALFLR
Trigger: GCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGG...TGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCTGGATCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569517.5
CDS-3UTR GCA 90 bp GCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGCTAAGGCCAAGTGCCTaGAAGAGCTTCACCCCTGAG +
Preference number: 4 (lower is better)
Translates to: ASEWEVMNSWGALRDTRLLRPSA*KSFTPE
Trigger: CTCAGGGGTGAAGCTCTTGCAGGCACTTGGCCTTAG...CAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563907.5
ENST00000567941.5
CDS-3UTR GCA 90 bp TGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGCTTTTCTTCCTGCAGCCACGGCTaGCAGCTGGTTGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: CWVSGRALLKWARKNCFSSCSHG*QLVGPV
Trigger: CACTGGGCCAACCAGCTGGCAGCCGTGGCTGCAGGA...AGAAAAGCAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp CTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGCATGAACTCTTGGGGTaGCCTCAGAGACACTCGGCT +
Preference number: 4 (lower is better)
Translates to: LVGPVSIHSCQDVVDQRVHELLG*PQRHSA
Trigger: AGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATG...CACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp GGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGACATGAACTCTTGGGGTaGCCTCAGAGACACTCGGCT +
Preference number: 4 (lower is better)
Translates to: GWPSVHPQLPGCGRPACGHELLG*PQRHSA
Trigger: AGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATG...TCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp AATACAATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCGAGCCTGGCAGCTCTaGCTCCAGCAGGAAGACGCA +
Preference number: 4 (lower is better)
Translates to: NTILEPASEWEVMNSWGARAWQL*LQQEDA
Trigger: TGCGTCTTCCTGCTGGAGCCAGAGCTGCCAGGCTCG...GGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
CDS-3UTR CCA 90 bp GCCACGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGGAACTGGAATACCAGTaGGGATGTCAGAAATGGAGG +
Preference number: 4 (lower is better)
Translates to: ATAASWLAQCPSTVARMWELEYQ*GCQKWR
Trigger: CCTCCATTTCTGACATCCCCACTGGTATTCCAGTTC...CCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp GTCATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTCGGCTGCCAGCTGGTTaGCCCAGTGTCCATCCACAG +
Preference number: 4 (lower is better)
Translates to: VMNSWGALRDTRLVSMVSRLPAG*PSVHPQ
Trigger: CTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCG...AGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp CTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGTGTCTATGGTTTCTGTaGCGCAGGCCTGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LVGPVSIHSCQDVVDQRVCLWFL*RRPVSQ
Trigger: CTGGGACACAGGCCTGCGCCACAGAAACCATAGACA...CACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp CCACGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTGGTTTAATACAATCCTaGAGCCTGCCTCCGAATGGG +
Preference number: 4 (lower is better)
Translates to: PRLPAGWPSVHPQLPGCGGLIQS*SLPPNG
Trigger: CCCATTCGGAGGCAGGCTCCAGGATTGTATTAAACC...ACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR CAA 72 bp CCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTaGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTAT +
Preference number: 4 (lower is better)
Translates to: PGACLRMGSHEL*GCPQRHSAGVY
Trigger: ATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp GGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGACAAGAGCTTCACCCCTaGGAGCACCACATCAACACA +
Preference number: 4 (lower is better)
Translates to: GWPSVHPQLPGCGRPACGQELHP*EHHINT
Trigger: TGTGTTGATGTGGTGCTCTCAGGGGTGAAGCTCTTG...TCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563907.5
ENST00000567941.5
CDS-3UTR TCA 90 bp AAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGCCTGGCTCCTGGGAACTCTaGTGCAACCTGGGCAATGTC +
Preference number: 4 (lower is better)
Translates to: KLGNEVQPGPREPFTSQPGSWEL*CNLGNV
Trigger: GACATTGCCCAGGTTGCATCAGAGTTCCCAGGAGCC...AGGCTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311669.12
ENST00000567941.5
CDS-3UTR TCA 90 bp GGACCTCTGAGAAGCCCTGTTTCTGCGCGGCTCCGCCCGACCTCCAAGGCCGACCTTGATACTCTAAAATaGGGTGGAACTCATCCACTT +
Preference number: 4 (lower is better)
Translates to: GPLRSPVSARLRPTSKADLDTLK*GGTHPL
Trigger: AAGTGGATGAGTTCCACCTCATTTTAGAGTATCAAG...GTCGGCCTTGGAGGTCGGGCGGAGCCGCGCAGAAACAGGGCTTCTCAGAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569517.5
CDS-3UTR TCA 90 bp ACAATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCGGTCGTGAGAGAAGATaGATCGGTTGGCATGGGGAG +
Preference number: 4 (lower is better)
Translates to: TILEPASEWEVMNSWGALGRERR*IGWHGE
Trigger: CTCCCCATGCCAACCGATTCATCTTCTCTCACGACC...GAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
CDS-3UTR TCA 90 bp GGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGAAATGGAAGAGAGAGAAGAGTaGGGTCCAGAGGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: GPVSIHSCQDVVDQRVEMEEREE*GPEADW
Trigger: CCAGTCAGCCTCTGGACCTCACTCTTCTCTCTCTTC...CATTTCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp TCCTGCAGCCACGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGACACCAATACTGGTGTaGAGTGGAAGGATATTCCCT +
Preference number: 4 (lower is better)
Translates to: SCSHGCQLVGPVSIHSCQTPILV*SGRIFP
Trigger: AGGGAATATCCTTCCACTTCACACCAGTATTGGTGT...CTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGCTGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp GATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCCGAGGCTCTGCTGACCAGGATGTTGGGTaGGTGGGCGTGCACTTCTCA +
Preference number: 4 (lower is better)
Translates to: DVVDQRVEMDPGEIRGSADQDVG*VGVHFS
Trigger: TGAGAAGTGCACGCCCACTCACCCAACATCCTGGTC...AGCAGAGCCTCGGATCTCACCAGGATCCATTTCCACACGCTGGTCTACCACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp GACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGAGTGAGGTCCGACCAGGATGTTGGGTaGGTGGGCGTGCACTTCTCA +
Preference number: 4 (lower is better)
Translates to: DHAHIRNTVPGRERRVRSDQDVG*VGVHFS
Trigger: TGAGAAGTGCACGCCCACTCACCCAACATCCTGGTC...GGACCTCACTCTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp ATCCAGAAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAATCAGCCTGGGCCACGTaGACCTTTCACCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: IQKRMSLTMPTSGTPFQESAWAT*TFHQPA
Trigger: GGCTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGA...TTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGCTCCAAAGCTAGGCAATaGAGTTCAGCCTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: PGCWVSGRALLKWARKNCSKARQ*SSAWAT
Trigger: CGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGGA...GCAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp ATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCAGATCCAAAGCTAGGCAATaGAGTTCAGCCTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: ILEPASEWEVMNSWGALRSKARQ*SSAWAT
Trigger: CGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGGA...TCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp AAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGCCTTGGAAAGAGCAGCGGTaGCGAACCGGGTTCCACTCA +
Preference number: 4 (lower is better)
Translates to: KLGNEVQPGPREPFTSQPWKEQR*RTGFHS
Trigger: TGAGTGGAACCCGGTTCGTCACCGCTGCTCTTTCCA...AGGCTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR GCA 90 bp CAAAGACATTGTCATCAAGAAGCTCATGTAGCTTTGGACCAACTGGACCGCAAAAAGCGCGTCCCAGGCTaGCGCCAACCGGCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: QRHCHQEAHVALDQLDRKKRVPG*RQPALG
Trigger: CCCGAGGGCCGGTTGGCGGCAGCCTGGGACGCGCTT...TTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATGTCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS-3UTR GCA 90 bp ACCTCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTGAAGCGCTCAGCAGCTaGTCCCTTCCCCATGAAGTG +
Preference number: 4 (lower is better)
Translates to: TSHEAFLETRMLGEWACTEALSS*SLPHEV
Trigger: CACTTCATGGGGAAGGGAGCAGCTGCTGAGCGCTTC...AGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311669.12
ENST00000567941.5
CDS-3UTR GCA 90 bp CAGGATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCCGAGGCTCTGAAGCGCTCAGCAGCTaGTCCCTTCCCCATGAAGTG +
Preference number: 4 (lower is better)
Translates to: QDVVDQRVEMDPGEIRGSEALSS*SLPHEV
Trigger: CACTTCATGGGGAAGGGAGCAGCTGCTGAGCGCTTC...AGAGCCTCGGATCTCACCAGGATCCATTTCCACACGCTGGTCTACCACATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563907.5
ENST00000567941.5
CDS-3UTR GCA 90 bp CAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGTCCATCCACAGTTaGCAGGATGTGGTAGACCAG +
Preference number: 4 (lower is better)
Translates to: QLVGPVSIHSCQDVVDQRVSIHS*QDVVDQ
Trigger: CTGGTCTACCACATCCTGGCAACTGTGGATGGACAC...ACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp GCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCCATCCACAGTTaGCAGGATGTGGTAGACCAG +
Preference number: 4 (lower is better)
Translates to: ASEWEVMNSWGALRDTRLVSIHS*QDVVDQ
Trigger: CTGGTCTACCACATCCTGGCAACTGTGGATGGACAC...CAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp GCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCTGGAGGTTACAACCCTaGAGCTTGCAGCCATGGTCG +
Preference number: 4 (lower is better)
Translates to: AFLETRMLGEWACTSQVGWRLQP*SLQPWS
Trigger: CGACCATGGCTGCAAGCTGCAGGGTTGTAACCTCCA...GCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
CDS-3UTR CCA 90 bp GAACAAAGACATTGTCATCAAGAAGCTCATGTAGCTTTGGACCAACTGGACCGCGCGCCAGCGCCGGACTaGCCGCACGATAAGCGCGTC +
Preference number: 4 (lower is better)
Translates to: EQRHCHQEAHVALDQLDRAPAPD*PHDKRV
Trigger: GACGCGCTTATCGTGCGGCCAGTCCGGCGCTGGCGC...GCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATGTCTTTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS-3UTR CCA 90 bp TTTGGGTTTAATACAATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTGCGCCAGCGCCGGACTaGCCGCACGATAAGCGCGTC +
Preference number: 4 (lower is better)
Translates to: FGFNTILEPASEWEVMNSAPAPD*PHDKRV
Trigger: GACGCGCTTATCGTGCGGCCAGTCCGGCGCTGGCGC...AGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTATTAAACCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
CDS-3UTR CCA 90 bp CTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTGGCGCAGGGGTTTAATACAATCCTaGAGCCTGCCTCCGAATGGG +
Preference number: 4 (lower is better)
Translates to: LGVPSETLGWCLWFLWRRGLIQS*SLPPNG
Trigger: CCCATTCGGAGGCAGGCTCCAGGATTGTATTAAACC...CCTGCGCCACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp ACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGGCCAAGATATGTCCCTaGGAGGCCAGGACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TRMLGEWACTSQVGKEELAKICP*EARTSK
Trigger: CTTGGAGGTCCTGGCCTCCCAGGGACATATCTTGGC...CAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
CDS-3UTR TCA 90 bp GCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCCAAGAGCTTCACCCCTaGGAGCACCACATCAACACA +
Preference number: 4 (lower is better)
Translates to: AFLETRMLGEWACTSQVGQELHP*EHHINT
Trigger: TGTGTTGATGTGGTGCTCTCAGGGGTGAAGCTCTTG...GCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311669.12
ENST00000567941.5
CDS-3UTR TCA 90 bp CTCCTGCAGCCACGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCATTCCAGATCATTCCTTaGATGCAGAATGCTGTGATC +
Preference number: 4 (lower is better)
Translates to: LLQPRLPAGWPSVHPQLPFQIIP*MQNAVI
Trigger: GATCACAGCATTCTGCATTCAAGGAATGATCTGGAA...TGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGCTGCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563907.5
ENST00000567941.5
CDS-3UTR TCA 90 bp CCAGAAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGACTGGCCAGCTCTAGGTaGACTGGAATACCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: PEEDVTDHAHIRNTVPGRLASSR*TGIPVG
Trigger: CCCCACTGGTATTCCAGTTCACCTAGAGCTGGCCAG...TCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp TGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGAAATGAAGAGAGAGAAGAGTaGGGTCCAGAGGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: WPSVHPQLPGCGRPACGNEEREE*GPEADW
Trigger: CCAGTCAGCCTCTGGACCTCACTCTTCTCTCTCTTC...ATTTCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGCGGAAATGGATCCTGGTaGGATCCGAGGCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PGCWVSGRALLKWARKNCGNGSW*DPRLCF
Trigger: AAAGCAGAGCCTCGGATCTCACCAGGATCCATTTCC...GCAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp ACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGCCGAATGGGAAGTCATaGACTCTTGGGGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: TRMLGEWACTSQVGKEELPNGKS*TLGVPS
Trigger: TGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGG...CAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp TTATGGCAGAAAGCACATCCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTTCAGCCTGGGCCACGTaGACCTTTCACCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LWQKAHPKLGNEVQPGPRSAWAT*TFHQPA
Trigger: GGCTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGA...ACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGGATGTGCTTTCTGCCATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAATCTGAAGGGATACAGTaGGGTGCCTCACTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LETRMLGEWACTSQVGKESEGIQ*GASLQQ
Trigger: CTGCTGCAGTGAGGCACCTCACTGTATCCCTTCAGA...TTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
CDS-3UTR GCA 90 bp CCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGCTAAGGCCAAGTGCCTaGAAGAGCTTCACCCCTGAG +
Preference number: 4 (lower is better)
Translates to: PKLGNEVQPGPREPFTSQLRPSA*KSFTPE
Trigger: CTCAGGGGTGAAGCTCTTGCAGGCACTTGGCCTTAG...CTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311669.12
ENST00000567941.5
CDS-3UTR GCA 90 bp CAGGATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCCGAGGCTCTCTAAGGCCAAGTGCCTaGAAGAGCTTCACCCCTGAG +
Preference number: 4 (lower is better)
Translates to: QDVVDQRVEMDPGEIRGSLRPSA*KSFTPE
Trigger: CTCAGGGGTGAAGCTCTTGCAGGCACTTGGCCTTAG...AGAGCCTCGGATCTCACCAGGATCCATTTCCACACGCTGGTCTACCACATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563907.5
ENST00000567941.5
CDS-3UTR GCA 90 bp AAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGCCTAGGACTAAGGCCAAGTaGCTGCAAGAGCTTCACCCC +
Preference number: 4 (lower is better)
Translates to: KLGNEVQPGPREPFTSQPRTKAK*LQELHP
Trigger: GGGGTGAAGCTCTTGCAGGCACTTGGCCTTAGTCCT...AGGCTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311669.12
ENST00000567941.5
CDS-3UTR GCA 90 bp TGGGAAGTCATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGAGGACTAAGGCCAAGTaGCTGCAAGAGCTTCACCCC +
Preference number: 4 (lower is better)
Translates to: WEVMNSWGALRDTRLVSMRTKAK*LQELHP
Trigger: GGGGTGAAGCTCTTGCAGGCACTTGGCCTTAGTCCT...CATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563907.5
ENST00000567941.5
CDS-3UTR GCA 90 bp CAGGAACACCGTTCCAGGAAGAGAGAGAAGAGTGAGGTCCAGAGGCTGACTGGGGTGTCCATCCACAGTTaGCAGGATGTGGTAGACCAG +
Preference number: 4 (lower is better)
Translates to: QEHRSRKREKSEVQRLTGVSIHS*QDVVDQ
Trigger: CTGGTCTACCACATCCTGGCAACTGTGGATGGACAC...CCCAGTCAGCCTCTGGACCTCACTCTTCTCTCTCTTCCTGGAACGGTGTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp ACCTCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTTGGGTGAGTGGGCGTaGACTTCTCAAGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: TSHEAFLETRMLGEWACTLGEWA*TSQVGK
Trigger: CTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAA...AGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp TCCTTGCCCATGGGCACTGAGCTGAAAGAAAGAGGAACCTCACATGAGGCTTTCCTCCCCAGCCCCTGCTaGCATCATAAAGCACGGGAG +
Preference number: 4 (lower is better)
Translates to: SLPMGTELKERGTSHEAFLPSPC*HHKARE
Trigger: CTCCCGTGCTTTATGATGGCAGCAGGGGCTGGGGAG...GAAAGCCTCATGTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp CAAGAAGCTCATGTAGCTTTGGACCAACTGGACCGCAAAGAAGAACCTTTAAATTGGCACTCACCCCACTaGCACGCGGCGCCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: QEAHVALDQLDRKEEPLNWHSPH*HAAPAP
Trigger: CGGCGCTGGCGCCGCGTGGCAGTGGGGTGAGTGCCA...ATTTAAAGGTTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562286.1
ENST00000567941.5
CDS-3UTR GCA 90 bp GTCATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTAGGGATACAGTGAGGTaGCTCACTGCAGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VMNSWGALRDTRLVSMVSRDTVR*LTAAGG
Trigger: GCCTCCTGCTGCAGTGAGGCACCTCACTGTATCCCT...AGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569693.5
CDS-3UTR GCA 90 bp TCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTGGCGCAGGGCAAGAAGATGTTCTaGCCTGTCCTACTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SWGALRDTRLVSMVSVAQGKKMF*PVLLKL
Trigger: CAGCTTGAGTAGGACAGGGCAGAACATCTTCTTGCC...CTGCGCCACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569693.5
CDS-3UTR CCA 90 bp ACAATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCGGTCCAGAGGCTGACTaGGTGAGAAATAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: TILEPASEWEVMNSWGALGPEAD*VRNNSS
Trigger: GGAGCTGTTATTTCTCACCCAGTCAGCCTCTGGACC...GAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp ACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGAGTGAGGCTCGGCTGGTGTCTATaGTTTCTGTGGCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TDHAHIRNTVPGRERRVRLGWCL*FLWRRP
Trigger: AGGCCTGCGCCACAGAAACCATAGACACCAGCCGAG...CCTCACTCTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp CTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGAAGTCATGAACTCTTaGGGTGCCCTCAGAGACACT +
Preference number: 4 (lower is better)
Translates to: LVGPVSIHSCQDVVDQRVEVMNS*GALRDT
Trigger: AGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTC...CACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp ACAATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCGAGCCTGCCTCCGAATaGGAAGTCATGAACTCTTGG +
Preference number: 4 (lower is better)
Translates to: TILEPASEWEVMNSWGALEPASE*EVMNSW
Trigger: CCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTC...GAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp CCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGCAGGATGTTGGGTGAGTaGGCGTGCACTTCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: PGCWVSGRALLKWARKNCRMLGE*ACTSQV
Trigger: CACTTGAGAAGTGCACGCCCACTCACCCAACATCCT...GCAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp CTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTGGCGCACCAGCCTATAACCTATaGAGCCAGGACAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: LLGCPQRHSAGVYGFCGAPAYNL*SQDRKA
Trigger: TGCTTTCCTGTCCTGGCTCCATAGGTTATAGGCTGG...TGCGCCACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp TCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTGGCGCAGGAATGCAGAATGCTGTaGTCTTTCCCATTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SWGALRDTRLVSMVSVAQECRML*SFPFPG
Trigger: TCCTGGGAATGGGAAAGATCACAGCATTCTGCATTC...CTGCGCCACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563907.5
ENST00000567941.5
CDS-3UTR TCA 90 bp GCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCCCCTTCCCCATGAAGTaGATGAAGGCTTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: AFLETRMLGEWACTSQVGPFPMK*MKASSR
Trigger: TCTGGAAGAAGCCTTCATTCACTTCATGGGGAAGGG...GCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311669.12
ENST00000567941.5
CDS-3UTR TCA 90 bp CAAGATCCAGAAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGCTCCTGGGAACTCTaGTGCAACCTGGGCAATGTC +
Preference number: 4 (lower is better)
Translates to: QDPEEDVTDHAHIRNTVPGSWEL*CNLGNV
Trigger: GACATTGCCCAGGTTGCATCAGAGTTCCCAGGAGCC...TGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCTGGATCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563907.5
ENST00000567941.5
CDS-3UTR TCA 90 bp GCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCCACTCCTCCCCTGCTTaGTACTCTAAAATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: AFLETRMLGEWACTSQVGHSSPA*YSKMRW
Trigger: CCACCTCATTTTAGAGTATCAAGCAGGGGAGGAGTG...GCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
CDS-3UTR TCA 90 bp TCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTGGTCGTGAGAGAAGATaGATCGGTTGGCATGGGGAG +
Preference number: 4 (lower is better)
Translates to: SHEAFLETRMLGEWACTSGRERR*IGWHGE
Trigger: CTCCCCATGCCAACCGATTCATCTTCTCTCACGACC...AGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
CDS-3UTR TCA 90 bp ACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGCCGTTGGAGAGGTCGTaGGAGAAGATGAATCGGTTG +
Preference number: 4 (lower is better)
Translates to: TRMLGEWACTSQVGKEELPLERS*EKMNRL
Trigger: CAACCGATTCATCTTCTCTCACGACCTCTCCAACGG...CAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
CDS-3UTR TCA 90 bp GATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGACTGGCCAGCTCTAGGTaGACTGGAATACCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: DVTDHAHIRNTVPGRERRLASSR*TGIPVG
Trigger: CCCCACTGGTATTCCAGTTCACCTAGAGCTGGCCAG...TCTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CCAGAAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGACCGAATGGGAAGTCATaGACTCTTGGGGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PEEDVTDHAHIRNTVPGRPNGKS*TLGVPS
Trigger: TGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGG...TCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp GAAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGGAAGAGTCCTTCGGCTaGAATGGCATCTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: EEDVTDHAHIRNTVPGREEESFG*NGISKA
Trigger: GGCCTTGGAGATGCCATTTCAGCCGAAGGACTCTTC...CTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCGAAGAGTCCTTCGGCTaGAATGGCATCTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: HSCQDVVDQRVEMDPGEIEESFG*NGISKA
Trigger: GGCCTTGGAGATGCCATTTCAGCCGAAGGACTCTTC...GATCTCACCAGGATCCATTTCCACACGCTGGTCTACCACATCCTGGCAACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp AAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGCCTCCATGGGCACTGAGCTaGAAGAAAGAGGAACCTCAC +
Preference number: 4 (lower is better)
Translates to: KLGNEVQPGPREPFTSQPPWALS*KKEEPH
Trigger: GTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGG...AGGCTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CAGGATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCCGAGGCTCTCTTGCCCATGGGCACTaGGCTGAAAGAAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: QDVVDQRVEMDPGEIRGSLAHGH*AERKRN
Trigger: GTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAAG...AGAGCCTCGGATCTCACCAGGATCCATTTCCACACGCTGGTCTACCACATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp GGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGAAATGCAGACAACTGCAGAATaGAAGAGTCCCTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GPVSIHSCQDVVDQRVEMQTTAE*KSPSEA
Trigger: AGCCTCTGAGGGACTCTTTCATTCTGCAGTTGTCTG...CATTTCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CCTATAACCTATGGAGCCAGGACAGGAAAGCATGATCCTTCAGCTCATGACGCCGCTGCTGCCCACATCTaGAGGGATACAGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: PITYGARTGKHDPSAHDAAAAHI*RDTVRC
Trigger: GCACCTCACTGTATCCCTTCAGATGTGGGCAGCAGC...GGCGTCATGAGCTGAAGGATCATGCTTTCCTGTCCTGGCTCCATAGGTTATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
CDS-3UTR TCA 90 bp CTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTGGCGCACATCAACACATGCATTaGCTCGGGATGAGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LLGCPQRHSAGVYGFCGAHQHMH*LGMRER
Trigger: CCTTTCTCTCATCCCGAGTCAATGCATGTGTTGATG...TGCGCCACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR TCA 90 bp ATAACAGCTCCTGTTCATTCAGCCCAAGGGAAGTCACCGCGGGAAAGACCTGCTAAAGAAGAACCGGGATaGGAGAAAGGCGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ITAPVHSAQGKSPRERPAKEEPG*EKGAEA
Trigger: GGCCTCTGCGCCTTTCTCTCATCCCGGTTCTTCTTT...AGCAGGTCTTTCCCGCGGTGACTTCCCTTGGGCTGAATGAACAGGAGCTGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569517.5
CDS-3UTR GCA 90 bp TTTGGGTTTAATACAATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTAGCCACACGAGCTCCTaGAGCCACGGCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: FGFNTILEPASEWEVMNSSHTSS*SHGCQL
Trigger: CAGCTGGCAGCCGTGGCTGCAGGAGCTCGTGTGGCT...AGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTATTAAACCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp TGGCCAGCTCTAGGTGAACTGGAATACCAGTGGGGATGTCAGAAATGGAGGTTACTCCCCAGCCCCTGCTaGCATCATAAAGCACGGGAG +
Preference number: 4 (lower is better)
Translates to: WPALGELEYQWGCQKWRLLPSPC*HHKARE
Trigger: CTCCCGTGCTTTATGATGGCAGCAGGGGCTGGGGAG...TAACCTCCATTTCTGACATCCCCACTGGTATTCCAGTTCACCTAGAGCTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp ACCTCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTACAACCCTGCAGCTTaGAGCCATGGTCGGTTTAGC +
Preference number: 4 (lower is better)
Translates to: TSHEAFLETRMLGEWACTYNPAA*SHGRFS
Trigger: GCTAAACCGACCATGGCTGCAAGCTGCAGGGTTGTA...AGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
CDS-3UTR CCA 90 bp TGTCATCAAGAAGCTCATGTAGCTTTGGACCAACTGGACCGCAAAGAAGAACCGCGAGCCTGGCAGCTCTaGCTCCAGCAGGAAGACGCA +
Preference number: 4 (lower is better)
Translates to: CHQEAHVALDQLDRKEEPRAWQL*LQQEDA
Trigger: TGCGTCTTCCTGCTGGAGCCAGAGCTGCCAGGCTCG...CGGTTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562823.1
ENST00000569517.5
CDS-3UTR CCA 90 bp CTTCCTGCAATGACTCTGGTGGAACAAAGACATTGTCATCAAGAAGCTCATGTAGCGCCAGCGCCGGACTaGCCGCACGATAAGCGCGTC +
Preference number: 4 (lower is better)
Translates to: LPAMTLVEQRHCHQEAHVAPAPD*PHDKRV
Trigger: GACGCGCTTATCGTGCGGCCAGTCCGGCGCTGGCGC...TACATGAGCTTCTTGATGACAATGTCTTTGTTCCACCAGAGTCATTGCAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS-3UTR CCA 90 bp GTGAAGTGGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTTGTTTGGGCGGCTGCCAGCTGGTTaGCCCAGTGTCCATCCACAG +
Preference number: 4 (lower is better)
Translates to: VKWKDIPSLCHSTTGLFGRLPAG*PSVHPQ
Trigger: CTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCG...CCCAAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp GTAGCTTTGGACCAACTGGACCGCAAAGAAGAACCTTTAAATCTGAGTTGGCTGGCCACGGCTGCCAGCTaGTTGGCCCAGTGTCCATCC +
Preference number: 4 (lower is better)
Translates to: VALDQLDRKEEPLNLSWLATAAS*LAQCPS
Trigger: GGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGC...CAGCCAACTCAGATTTAAAGGTTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR CCA 90 bp CCTATAACCTATGGAGCCAGGACAGGAAAGCATGATCCTTCAGCTCATGACGCCCTCGGCTGGTGTCTATaGTTTCTGTGGCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PITYGARTGKHDPSAHDALGWCL*FLWRRP
Trigger: AGGCCTGCGCCACAGAAACCATAGACACCAGCCGAG...GGCGTCATGAGCTGAAGGATCATGCTTTCCTGTCCTGGCTCCATAGGTTATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp AAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGACTCGGCTGGTGTCTATaGTTTCTGTGGCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KRMSLTMPTSGTPFQEERLGWCL*FLWRRP
Trigger: AGGCCTGCGCCACAGAAACCATAGACACCAGCCGAG...TCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp CTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAGCCTGCCTCCGAATaGGAAGTCATGAACTCTTGG +
Preference number: 4 (lower is better)
Translates to: LETRMLGEWACTSQVGKEEPASE*EVMNSW
Trigger: CCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTC...TTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp CTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAAGGATGTTGGGTGAGTaGGCGTGCACTTCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: LETRMLGEWACTSQVGKERMLGE*ACTSQV
Trigger: CACTTGAGAAGTGCACGCCCACTCACCCAACATCCT...TTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp ACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGAGGATGTTGGGTGAGTaGGCGTGCACTTCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: TRMLGEWACTSQVGKEELRMLGE*ACTSQV
Trigger: CACTTGAGAAGTGCACGCCCACTCACCCAACATCCT...CAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGCAAGTTTCCTTATCACTaGAGAAGCGCTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PGCWVSGRALLKWARKNCKFPYH*RSAQQL
Trigger: CAGCTGCTGAGCGCTTCTTCAGTGATAAGGAAACTT...GCAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311669.12
ENST00000567941.5
CDS-3UTR TCA 90 bp CAGGATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCCGAGGCTCTCACTCCTCCCCTGCTTaGTACTCTAAAATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QDVVDQRVEMDPGEIRGSHSSPA*YSKMRW
Trigger: CCACCTCATTTTAGAGTATCAAGCAGGGGAGGAGTG...AGAGCCTCGGATCTCACCAGGATCCATTTCCACACGCTGGTCTACCACATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
CDS-3UTR TCA 90 bp GAAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGCCGTTGGAGAGGTCGTaGGAGAAGATGAATCGGTTG +
Preference number: 4 (lower is better)
Translates to: EEDVTDHAHIRNTVPGREPLERS*EKMNRL
Trigger: CAACCGATTCATCTTCTCTCACGACCTCTCCAACGG...CTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
CDS-3UTR TCA 90 bp AAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAACCGCGGGAAAGACCTaGTGGACAATGCTGCTCATG +
Preference number: 4 (lower is better)
Translates to: KRMSLTMPTSGTPFQEERTAGKT*WTMLLM
Trigger: CATGAGCAGCATTGTCCATCAGGTCTTTCCCGCGGT...TCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569693.5
CDS-3UTR TCA 90 bp TGGCAGAAAGCACATCCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAAACCGCGGGAAAGACCTaGTGGACAATGCTGCTCATG +
Preference number: 4 (lower is better)
Translates to: WQKAHPKLGNEVQPGPRETAGKT*WTMLLM
Trigger: CATGAGCAGCATTGTCCATCAGGTCTTTCCCGCGGT...TTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGGATGTGCTTTCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569693.5
CDS-3UTR TCA 90 bp TGGGAAGTCATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGAGAAGAGGATGTCACTaGCCATGCCCACATCAGGAA +
Preference number: 4 (lower is better)
Translates to: WEVMNSWGALRDTRLVSMRRGCH*PCPHQE
Trigger: TTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCT...CATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp TCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGGAAATGGATCCTGGTaGGATCCGAGGCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SIHSCQDVVDQRVEMDPGGNGSW*DPRLCF
Trigger: AAAGCAGAGCCTCGGATCTCACCAGGATCCATTTCC...ACCAGGATCCATTTCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp GTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCCGAGGCTCTGCTTTTCCATGGGCACTGAGCTaGAAGAAAGAGGAACCTCAC +
Preference number: 4 (lower is better)
Translates to: VVDQRVEMDPGEIRGSAFPWALS*KKEEPH
Trigger: GTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGG...AAAAGCAGAGCCTCGGATCTCACCAGGATCCATTTCCACACGCTGGTCTACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAACGGAATGGAAATCATaGTCCTTGCCCATGGGCACT +
Preference number: 4 (lower is better)
Translates to: LETRMLGEWACTSQVGKETEWKS*SLPMGT
Trigger: AGTGCCCATGGGCAAGGATCATGATTTCCATTCCGT...TTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp ACCTCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTACGGAATGGAAATCATaGTCCTTGCCCATGGGCACT +
Preference number: 4 (lower is better)
Translates to: TSHEAFLETRMLGEWACTTEWKS*SLPMGT
Trigger: AGTGCCCATGGGCAAGGATCATGATTTCCATTCCGT...AGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp AGAGGAACCTCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGCAGACAACTGCAGAATaGAAGAGTCCCTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RGTSHEAFLETRMLGEWAQTTAE*KSPSEA
Trigger: AGCCTCTGAGGGACTCTTTCATTCTGCAGTTGTCTG...CGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGAGGTTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CAAGATCCAGAAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGCGGGAAAGACCTGCTaGTGGACAATGCTGCTCATG +
Preference number: 4 (lower is better)
Translates to: QDPEEDVTDHAHIRNTVPAGKTC*WTMLLM
Trigger: CATGAGCAGCATTGTCCATCAGCAGGTCTTTCCCGC...TGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCTGGATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000569517.5
ENST00000569534.5
CDS-3UTR TCA 90 bp GTGGAACAAAGACATTGTCATCAAGAAGCTCATGTAGCTTTGGACCAACTGGACCCTCCCGGGGACCTCTaGGAAGCCCTGTTTCTGCGC +
Preference number: 4 (lower is better)
Translates to: VEQRHCHQEAHVALDQLDPPGDL*EALFLR
Trigger: GCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGG...GTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATGTCTTTGTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS-3UTR GCA 90 bp AAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGCCTCACCACATCAACACATaGATTGACTCCCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: KLGNEVQPGPREPFTSQPHHINT*IDSHCH
Trigger: GTGGCAGTGGGAGTCAATGCATGTGTTGATGTGGTG...AGGCTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311669.12
CDS-3UTR GCA 90 bp ATCCAGAAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAAGGACTAAGGCCAAGTaGCTGCAAGAGCTTCACCCC +
Preference number: 4 (lower is better)
Translates to: IQKRMSLTMPTSGTPFQERTKAK*LQELHP
Trigger: GGGGTGAAGCTCTTGCAGGCACTTGGCCTTAGTCCT...TTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563907.5
ENST00000567941.5
CDS-3UTR GCA 90 bp TGGCAGAAAGCACATCCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACATGAACTCTTGGGGTaGCCTCAGAGACACTCGGCT +
Preference number: 4 (lower is better)
Translates to: WQKAHPKLGNEVQPGPREHELLG*PQRHSA
Trigger: AGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATG...TTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGGATGTGCTTTCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp CCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGTACAATCCTGGAGCCTaGCTCCGAATGGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: PKLGNEVQPGPREPFTSQYNPGA*LRMGSH
Trigger: ATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTA...CTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp ACCTCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTACAATCCTGGAGCCTaGCTCCGAATGGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: TSHEAFLETRMLGEWACTYNPGA*LRMGSH
Trigger: ATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTA...AGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp CATTGTCATCAAGAAGCTCATGTAGCTTTGGACCAACTGGACCGCAAAGAAGAAGAGAAGCCCTGTTTCTaGGCGGCTCCGCCCGACCTC +
Preference number: 4 (lower is better)
Translates to: HCHQEAHVALDQLDRKEEEKPCF*AAPPDL
Trigger: GAGGTCGGGCGGAGCCGCGCAGAAACAGGGCTTCTC...TTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS-3UTR GCA 90 bp CAAGATCCAGAAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAAGCTCCACAGCCAGCTaGCAAGATATGTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QDPEEDVTDHAHIRNTVPSSTAS*QDMSLG
Trigger: TCCCAGGGACATATCTTGGCAGCTGGCTGTGGAGCT...TGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCTGGATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
CDS-3UTR GCA 90 bp TTGCCCATGGGCACTGAGCTGAAAGAAAGAGGAACCTCACATGAGGCTTTCCTAAGTGAGGTGCCTCACTaGAGCAGGAGGCAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPMGTELKERGTSHEAFLSEVPH*SRRQAP
Trigger: TGGAGCTTGCCTCCTGCTGCAGTGAGGCACCTCACT...TAGGAAAGCCTCATGTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
CDS-3UTR GCA 90 bp ACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGAGTGAGGCTGTCCTACTCAAGCTaGTGCCCACATCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: TDHAHIRNTVPGRERRVRLSYSS*CPHLKG
Trigger: TCCCTTCAGATGTGGGCAGCAGCTTGAGTAGGACAG...CCTCACTCTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
CDS-3UTR GCA 90 bp CCCCTAAGAATCTTCCTAATAGTGAGGGTGTACTTCCGAATAGAAGAGTCCTTCAAAGAAGAACCCCACTaGCACGCGGCGCCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: PLRIFLIVRVYFRIEESFKEEPH*HAAPAP
Trigger: CGGCGCTGGCGCCGCGTGGCAGTGGGGTTCTTCTTT...GAAGGACTCTTCTATTCGGAAGTACACCCTCACTATTAGGAAGATTCTTAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569534.5
CDS-3UTR CCA 90 bp AGAGGAACCTCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTATTCATGGCCCCGTTaGAGAGGTCGTGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: RGTSHEAFLETRMLGEWAYSWPR*RGRERR
Trigger: TCTTCTCTCACGACCTCTCCAACGGGGCCATGAATA...CGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGAGGTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
CDS-3UTR CCA 90 bp GAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGAAGTCATGAACTCTTaGGGTGCCCTCAGAGACACT +
Preference number: 4 (lower is better)
Translates to: EAFLETRMLGEWACTSQVEVMNS*GALRDT
Trigger: AGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTC...CACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp GATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCCGAGGCTCTGCTGAAGTCATGAACTCTTaGGGTGCCCTCAGAGACACT +
Preference number: 4 (lower is better)
Translates to: DVVDQRVEMDPGEIRGSAEVMNS*GALRDT
Trigger: AGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTC...AGCAGAGCCTCGGATCTCACCAGGATCCATTTCCACACGCTGGTCTACCACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp ACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGAGTGAGGGAGCCTGCCTCCGAATaGGAAGTCATGAACTCTTGG +
Preference number: 4 (lower is better)
Translates to: TDHAHIRNTVPGRERRVREPASE*EVMNSW
Trigger: CCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTC...CCTCACTCTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp AAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGCCTGGTTTAATACAATCCTaGAGCCTGCCTCCGAATGGG +
Preference number: 4 (lower is better)
Translates to: KLGNEVQPGPREPFTSQPGLIQS*SLPPNG
Trigger: CCCATTCGGAGGCAGGCTCCAGGATTGTATTAAACC...AGGCTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp TCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTGGCGCAGGGCCTACAGTTCGAATaGGGTCTTTACACACCAATA +
Preference number: 4 (lower is better)
Translates to: SWGALRDTRLVSMVSVAQGLQFE*GLYTPI
Trigger: TATTGGTGTGTAAAGACCCCATTCGAACTGTAGGCC...CTGCGCCACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp AGAGGAACCTCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGCCAGCCTATAACCTATaGAGCCAGGACAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: RGTSHEAFLETRMLGEWAPAYNL*SQDRKA
Trigger: TGCTTTCCTGTCCTGGCTCCATAGGTTATAGGCTGG...CGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGAGGTTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp ACCTCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTGAATGCAGAATGCTGTaGTCTTTCCCATTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TSHEAFLETRMLGEWACTECRML*SFPFPG
Trigger: TCCTGGGAATGGGAAAGATCACAGCATTCTGCATTC...AGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311669.12
ENST00000567941.5
CDS-3UTR TCA 90 bp CACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCCCCTTCCCCATGAAGTaGATGAAGGCTTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: HSCQDVVDQRVEMDPGEIPFPMK*MKASSR
Trigger: TCTGGAAGAAGCCTTCATTCACTTCATGGGGAAGGG...GATCTCACCAGGATCCATTTCCACACGCTGGTCTACCACATCCTGGCAACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563907.5
ENST00000567941.5
CDS-3UTR TCA 90 bp TACTGGCCAGCTCTAGGTGAACTGGAATACCAGTGGGGATGTCAGAAATGGAGGGGAAATGGATCCTGGTaGGATCCGAGGCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: YWPALGELEYQWGCQKWRGNGSW*DPRLCF
Trigger: AAAGCAGAGCCTCGGATCTCACCAGGATCCATTTCC...CCTCCATTTCTGACATCCCCACTGGTATTCCAGTTCACCTAGAGCTGGCCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCAAGAGGAACCTCACATaGGGCTTTCCTAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: HSCQDVVDQRVEMDPGEIKRNLT*GFPRDQ
Trigger: CTGGTCTCTAGGAAAGCCTCATGTGAGGTTCCTCTT...GATCTCACCAGGATCCATTTCCACACGCTGGTCTACCACATCCTGGCAACTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp AACTGCTTTTCTCCAGCTGACATGCTCTCAGGGGTGAAGAAGTTTAGCTTAAAACCCAGGCGCCGCACCTaGGCGAACCAACTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: NCFSPADMLSGVKKFSLKPRRRT*ANQLLS
Trigger: GGAAAGGAGTTGGTTCGCGCAGGTGCGGCGCCTGGG...TTTTAAGCTAAACTTCTTCACCCCTGAGAGCATGTCAGCTGGAGAAAAGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311669.12
ENST00000569534.5
CDS-3UTR GCA 90 bp TGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGCTTTTCTGTGTCCATCCACAGTTaGCAGGATGTGGTAGACCAG +
Preference number: 4 (lower is better)
Translates to: CWVSGRALLKWARKNCFSVSIHS*QDVVDQ
Trigger: CTGGTCTACCACATCCTGGCAACTGTGGATGGACAC...AGAAAAGCAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp GTCATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTTACAATCCTGGAGCCTaGCTCCGAATGGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: VMNSWGALRDTRLVSMVSYNPGA*LRMGSH
Trigger: ATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTA...AGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp GGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTTGTTTGGGTTTAATAGCCACGGCTGCCAGCTaGTTGGCCCAGTGTCCATCC +
Preference number: 4 (lower is better)
Translates to: GRIFPLCAILLLACLGLIATAAS*LAQCPS
Trigger: GGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGC...TATTAAACCCAAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp GCTGAAATGGCATCTCCAAGGCCTACAGTTCGAATGGGGTCTTTACACACCAATCTCGGCTGGTGTCTATaGTTTCTGTGGCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: AEMASPRPTVRMGSLHTNLGWCL*FLWRRP
Trigger: AGGCCTGCGCCACAGAAACCATAGACACCAGCCGAG...ATTGGTGTGTAAAGACCCCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp GGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGAAATACTGGTGTGAAGTaGAAGGATATTCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GWPSVHPQLPGCGRPACGNTGVK*KDIPSL
Trigger: CAGAGAGGGAATATCCTTCCACTTCACACCAGTATT...TCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp AAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGCCTCGTGCACTTCTCAAGTaGGCAAGGAAGAACTGCTTT +
Preference number: 4 (lower is better)
Translates to: KLGNEVQPGPREPFTSQPRALLK*ARKNCF
Trigger: AAAGCAGTTCTTCCTTGCCCACTTGAGAAGTGCACG...AGGCTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGCTTGATACTCTAAAATaGGGTGGAACTCATCCACTT +
Preference number: 4 (lower is better)
Translates to: LVGPVSIHSCQDVVDQRVLDTLK*GGTHPL
Trigger: AAGTGGATGAGTTCCACCTCATTTTAGAGTATCAAG...CACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
CDS-3UTR TCA 90 bp AGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAACAGAGGCTGACTGGGTaGGAAATAACAGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: RMSLTMPTSGTPFQEEREQRLTG*EITAPV
Trigger: AACAGGAGCTGTTATTTCTCACCCAGTCAGCCTCTG...TTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGACACCAATACTGGTGTaGAGTGGAAGGATATTCCCT +
Preference number: 4 (lower is better)
Translates to: PKLGNEVQPGPREPFTSQTPILV*SGRIFP
Trigger: AGGGAATATCCTTCCACTTCACACCAGTATTGGTGT...CTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp GATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGAAAGAGGAACCTCACATaGGGCTTTCCTAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: DVTDHAHIRNTVPGRERRKRNLT*GFPRDQ
Trigger: CTGGTCTCTAGGAAAGCCTCATGTGAGGTTCCTCTT...TCTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CCTATAACCTATGGAGCCAGGACAGGAAAGCATGATCCTTCAGCTCATGACGCCCAGACAACTGCAGAATaGAAGAGTCCCTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PITYGARTGKHDPSAHDAQTTAE*KSPSEA
Trigger: AGCCTCTGAGGGACTCTTTCATTCTGCAGTTGTCTG...GGCGTCATGAGCTGAAGGATCATGCTTTCCTGTCCTGGCTCCATAGGTTATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp GCTGAAATGGCATCTCCAAGGCCTACAGTTCGAATGGGGTCTTTACACACCAATTTGGGTGAGTGGGCGTaGACTTCTCAAGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: AEMASPRPTVRMGSLHTNLGEWA*TSQVGK
Trigger: CTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAA...ATTGGTGTGTAAAGACCCCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp AATAGAAGAGTCCTTCGGCTGAAATGGCATCTCCAAGGCCTACAGTTCGAATGGTTGGGTGAGTGGGCGTaGACTTCTCAAGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: NRRVLRLKWHLQGLQFEWLGEWA*TSQVGK
Trigger: CTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAA...CCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGCCGAAGGACTCTTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp CCACTTCCTGCAATGACTCTGGTGGAACAAAGACATTGTCATCAAGAAGCTCATCTCCCCAGCCCCTGCTaGCATCATAAAGCACGGGAG +
Preference number: 4 (lower is better)
Translates to: PLPAMTLVEQRHCHQEAHLPSPC*HHKARE
Trigger: CTCCCGTGCTTTATGATGGCAGCAGGGGCTGGGGAG...ATGAGCTTCTTGATGACAATGTCTTTGTTCCACCAGAGTCATTGCAGGAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR CCA 90 bp ATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCAGATACTCTAAAATGAGGTaGAACTCATCCACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: ILEPASEWEVMNSWGALRYSKMR*NSSTSC
Trigger: GCAGGAAGTGGATGAGTTCCACCTCATTTTAGAGTA...TCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
CDS-3UTR CCA 90 bp CCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGTGGGGATGTCAGAAATaGAGGTTACAACCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: PKLGNEVQPGPREPFTSQWGCQK*RLQPPR
Trigger: TCTTGGAGGTTGTAACCTCCATTTCTGACATCCCCA...CTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
CDS-3UTR CCA 90 bp TCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAACTGGAATACCAGTaGGGATGTCAGAAATGGAGG +
Preference number: 4 (lower is better)
Translates to: SIHSCQDVVDQRVEMDPGELEYQ*GCQKWR
Trigger: CCTCCATTTCTGACATCCCCACTGGTATTCCAGTTC...ACCAGGATCCATTTCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp TTATGGCAGAAAGCACATCCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGGTCCAGAGGCTGACTaGGTGAGAAATAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LWQKAHPKLGNEVQPGPRGPEAD*VRNNSS
Trigger: GGAGCTGTTATTTCTCACCCAGTCAGCCTCTGGACC...ACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGGATGTGCTTTCTGCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp GGGAGGGATTGTTTTGTCCTTAGCGGCTCTGTCCTAAATTTGAGAGCAGGAGACACCAGCGTGTGGAAATaGATCCTGGTGAGATCCGAG +
Preference number: 4 (lower is better)
Translates to: GRDCFVLSGSVLNLRAGDTSVWK*ILVRSE
Trigger: CTCGGATCTCACCAGGATCCATTTCCACACGCTGGT...GTCTCCTGCTCTCAAATTTAGGACAGAGCCGCTAAGGACAAAACAATCCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp AGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAATCAGAGACACTCGGCTaGTGTCTATGGTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RMSLTMPTSGTPFQEERESETLG*CLWFLW
Trigger: CCACAGAAACCATAGACACCAGCCGAGTGTCTCTGA...TTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp CAAGATCCAGAAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGAAGTCATGAACTCTTaGGGTGCCCTCAGAGACACT +
Preference number: 4 (lower is better)
Translates to: QDPEEDVTDHAHIRNTVPEVMNS*GALRDT
Trigger: AGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTC...TGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCTGGATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp ATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCAGAAATACTGGTGTGAAGTaGAAGGATATTCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ILEPASEWEVMNSWGALRNTGVK*KDIPSL
Trigger: CAGAGAGGGAATATCCTTCCACTTCACACCAGTATT...TCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp AAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGCCTGGCCTACAGTTCGAATaGGGTCTTTACACACCAATA +
Preference number: 4 (lower is better)
Translates to: KLGNEVQPGPREPFTSQPGLQFE*GLYTPI
Trigger: TATTGGTGTGTAAAGACCCCATTCGAACTGTAGGCC...AGGCTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp TCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCGTGCACTTCTCAAGTaGGCAAGGAAGAACTGCTTT +
Preference number: 4 (lower is better)
Translates to: SHEAFLETRMLGEWACTSRALLK*ARKNCF
Trigger: AAAGCAGTTCTTCCTTGCCCACTTGAGAAGTGCACG...AGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp CATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGAGTGAGGTCCAGACGTGCACTTCTCAAGTaGGCAAGGAAGAACTGCTTT +
Preference number: 4 (lower is better)
Translates to: HAHIRNTVPGRERRVRSRRALLK*ARKNCF
Trigger: AAAGCAGTTCTTCCTTGCCCACTTGAGAAGTGCACG...TCTGGACCTCACTCTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp TTGCCCATGGGCACTGAGCTGAAAGAAAGAGGAACCTCACATGAGGCTTTCCTAAGGATGTTGGGTGAGTaGGCGTGCACTTCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: LPMGTELKERGTSHEAFLRMLGE*ACTSQV
Trigger: CACTTGAGAAGTGCACGCCCACTCACCCAACATCCT...TAGGAAAGCCTCATGTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp AAGAGTCCTTCGGCTGAAATGGCATCTCCAAGGCCTACAGTTCGAATGGGGTCTCCAGCCTATAACCTATaGAGCCAGGACAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: KSPSAEMASPRPTVRMGSPAYNL*SQDRKA
Trigger: TGCTTTCCTGTCCTGGCTCCATAGGTTATAGGCTGG...AGACCCCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGCCGAAGGACTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp TACTGGCCAGCTCTAGGTGAACTGGAATACCAGTGGGGATGTCAGAAATGGAGGTGGGGATGTCAGAAATaGAGGTTACAACCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: YWPALGELEYQWGCQKWRWGCQK*RLQPCS
Trigger: GCTGCAGGGTTGTAACCTCCATTTCTGACATCCCCA...CCTCCATTTCTGACATCCCCACTGGTATTCCAGTTCACCTAGAGCTGGCCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569693.5
CDS-3UTR TCA 90 bp ACCTCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTTCCAGATCATTCCTTaGATGCAGAATGCTGTGATC +
Preference number: 4 (lower is better)
Translates to: TSHEAFLETRMLGEWACTFQIIP*MQNAVI
Trigger: GATCACAGCATTCTGCATTCAAGGAATGATCTGGAA...AGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311669.12
ENST00000567941.5
CDS-3UTR TCA 90 bp AAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAAAGTTTCCTTATCACTaGAGAAGCGCTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: KRMSLTMPTSGTPFQEERKFPYH*RSAQQL
Trigger: CAGCTGCTGAGCGCTTCTTCAGTGATAAGGAAACTT...TCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563907.5
ENST00000567941.5
CDS-3UTR TCA 90 bp GTGGAACAAAGACATTGTCATCAAGAAGCTCATGTAGCTTTGGACCAACTGGACGGCTCCTGGGAACTCTaGTGCAACCTGGGCAATGTC +
Preference number: 4 (lower is better)
Translates to: VEQRHCHQEAHVALDQLDGSWEL*CNLGNV
Trigger: GACATTGCCCAGGTTGCATCAGAGTTCCCAGGAGCC...GTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATGTCTTTGTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR TCA 90 bp TTGCCCATGGGCACTGAGCTGAAAGAAAGAGGAACCTCACATGAGGCTTTCCTACAGAGGCTGACTGGGTaGGAAATAACAGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LPMGTELKERGTSHEAFLQRLTG*EITAPV
Trigger: AACAGGAGCTGTTATTTCTCACCCAGTCAGCCTCTG...TAGGAAAGCCTCATGTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp AGGTGGAACTCATCCACTTCCTGCAATGACTCTGGTGGAACAAAGACATTGTCAGAAGAGAGAGAAGAGTaGGGTCCAGAGGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: RWNSSTSCNDSGGTKTLSEEREE*GPEADW
Trigger: CCAGTCAGCCTCTGGACCTCACTCTTCTCTCTCTTC...TGACAATGTCTTTGTTCCACCAGAGTCATTGCAGGAAGTGGATGAGTTCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569517.5
CDS-3UTR TCA 90 bp TTGCCCATGGGCACTGAGCTGAAAGAAAGAGGAACCTCACATGAGGCTTTCCTAAGAAGAGGATGTCACTaGCCATGCCCACATCAGGAA +
Preference number: 4 (lower is better)
Translates to: LPMGTELKERGTSHEAFLRRGCH*PCPHQE
Trigger: TTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCT...TAGGAAAGCCTCATGTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp GGTGTGAAGTGGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTTGTTTCCGAATGGGAAGTCATaGACTCTTGGGGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GVKWKDIPSLCHSTTGLFPNGKS*TLGVPS
Trigger: TGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGG...AAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACTTCACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGAGTGAGGTCCAGAACACCAATACTGGTGTaGAGTGGAAGGATATTCCCT +
Preference number: 4 (lower is better)
Translates to: HAHIRNTVPGRERRVRSRTPILV*SGRIFP
Trigger: AGGGAATATCCTTCCACTTCACACCAGTATTGGTGT...TCTGGACCTCACTCTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp GTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCCGAGGCTCTGCTTTTTGGGGATTTGGGAACTaGGTTTTTAGCTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: VVDQRVEMDPGEIRGSAFWGFGN*VFSSVT
Trigger: TGTCACAGAGCTAAAAACTCAGTTCCCAAATCCCCA...AAAAGCAGAGCCTCGGATCTCACCAGGATCCATTTCCACACGCTGGTCTACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp TTGCCCATGGGCACTGAGCTGAAAGAAAGAGGAACCTCACATGAGGCTTTCCTAAAGAGGAACCTCACATaGGGCTTTCCTAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: LPMGTELKERGTSHEAFLKRNLT*GFPRDQ
Trigger: CTGGTCTCTAGGAAAGCCTCATGTGAGGTTCCTCTT...TAGGAAAGCCTCATGTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp ATGGCATCTCCAAGGCCTACAGTTCGAATGGGGTCTTTACACACCAATACTGGTCCATGGGCACTGAGCTaGAAGAAAGAGGAACCTCAC +
Preference number: 4 (lower is better)
Translates to: MASPRPTVRMGSLHTNTGPWALS*KKEEPH
Trigger: GTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGG...ACCAGTATTGGTGTGTAAAGACCCCATTCGAACTGTAGGCCTTGGAGATGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp GGTGAACTGGAATACCAGTGGGGATGTCAGAAATGGAGGTTACAACCTCCAAGACTTGCCCATGGGCACTaGGCTGAAAGAAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: GELEYQWGCQKWRLQPPRLAHGH*AERKRN
Trigger: GTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAAG...TCTTGGAGGTTGTAACCTCCATTTCTGACATCCCCACTGGTATTCCAGTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
CDS-3UTR TCA 90 bp CATTGTCATCAAGAAGCTCATGTAGCTTTGGACCAACTGGACCGCAAAGAAGAATGGAAAGAGCAGCGGTaGCGAACCGGGTTCCACTCA +
Preference number: 4 (lower is better)
Translates to: HCHQEAHVALDQLDRKEEWKEQR*RTGFHS
Trigger: TGAGTGGAACCCGGTTCGTCACCGCTGCTCTTTCCA...TTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562286.1
ENST00000567941.5
ENST00000569517.5
CDS-3UTR GCA 90 bp CAAGAAGCTCATGTAGCTTTGGACCAACTGGACCGCAAAGAAGAACCTTTAAATAGGCTCCCCAGCCCCTaGTGCCATCATAAAGCACGG +
Preference number: 4 (lower is better)
Translates to: QEAHVALDQLDRKEEPLNRLPSP*CHHKAR
Trigger: CCGTGCTTTATGATGGCAGCAGGGGCTGGGGAGCCT...ATTTAAAGGTTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR GCA 90 bp TGGCAGAAAGCACATCCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAAAGGCTTCCAGACAACTaGAGAATGAAAGAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: WQKAHPKLGNEVQPGPRERLPDN*RMKESL
Trigger: GAGGGACTCTTTCATTCTGCAGTTGTCTGGAAGCCT...TTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGGATGTGCTTTCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp CCTTCGGCTGAAATGGCATCTCCAAGGCCTACAGTTCGAATGGGGTCTTTACACAGGCTTCCAGACAACTaGAGAATGAAAGAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PSAEMASPRPTVRMGSLHRLPDN*RMKESL
Trigger: GAGGGACTCTTTCATTCTGCAGTTGTCTGGAAGCCT...GTGTAAAGACCCCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGCCGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp GGGAAAGACCTGCTGATGGACAATGCTGCTCATGAGCTCCCTGTTAGTCATACTATGAATCGGTTGGCATaGGGAGCTTTTAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: GKDLLMDNAAHELPVSHTMNRLA*GAFNWP
Trigger: GGGCCAGTTAAAAGCTCCCCATGCCAACCGATTCAT...AGTATGACTAACAGGGAGCTCATGAGCAGCATTGTCCATCAGCAGGTCTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569534.5
CDS-3UTR CCA 90 bp AGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGAACTGGAATACCAGTaGGGATGTCAGAAATGGAGG +
Preference number: 4 (lower is better)
Translates to: RMSLTMPTSGTPFQEEREELEYQ*GCQKWR
Trigger: CCTCCATTTCTGACATCCCCACTGGTATTCCAGTTC...TTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp AGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTTGTTTGGGTTTAATACAACGGCTGCCAGCTGGTTaGCCCAGTGTCCATCCACAG +
Preference number: 4 (lower is better)
Translates to: RIFPLCAILLLACLGLIQRLPAG*PSVHPQ
Trigger: CTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCG...TTGTATTAAACCCAAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp TTAAATATTGTCATTGTAACACGGAATGGAAATCATGATCCTTGCCCATGGGCAGCCACGGCTGCCAGCTaGTTGGCCCAGTGTCCATCC +
Preference number: 4 (lower is better)
Translates to: LNIVIVTRNGNHDPCPWAATAAS*LAQCPS
Trigger: GGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGC...TGCCCATGGGCAAGGATCATGATTTCCATTCCGTGTTACAATGACAATATTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp TTTACTCCTCCCATGTTCTTTCAAGATCCAGAAGAGGATGTCACTGACCATGCCTGTCTATGGTTTCTGTaGCGCAGGCCTGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: FTPPMFFQDPEEDVTDHACLWFL*RRPVSQ
Trigger: CTGGGACACAGGCCTGCGCCACAGAAACCATAGACA...GGCATGGTCAGTGACATCCTCTTCTGGATCTTGAAAGAACATGGGAGGAGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp TTATGGCAGAAAGCACATCCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTTCAGAGACACTCGGCTaGTGTCTATGGTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LWQKAHPKLGNEVQPGPRSETLG*CLWFLW
Trigger: CCACAGAAACCATAGACACCAGCCGAGTGTCTCTGA...ACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGGATGTGCTTTCTGCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp ACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGAATACTGGTGTGAAGTaGAAGGATATTCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TRMLGEWACTSQVGKEELNTGVK*KDIPSL
Trigger: CAGAGAGGGAATATCCTTCCACTTCACACCAGTATT...CAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACCTTTCACCAGCCAGAGGCTGGAATGTACCTaGTACAGTTTAATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PKLGNEVQPGPREPFTSQRLECT*YSLICF
Trigger: AAAGCAGATTAAACTGTATCAGGTACATTCCAGCCT...CTGGCTGGTGAAAGGTTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp AACTCATCCACTTCCTGCAATGACTCTGGTGGAACAAAGACATTGTCATCAAGATGCATTGACTCGGGATaGGAGAAAGGCGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: NSSTSCNDSGGTKTLSSRCIDSG*EKGAEA
Trigger: GGCCTCTGCGCCTTTCTCTCATCCCGAGTCAATGCA...TCTTGATGACAATGTCTTTGTTCCACCAGAGTCATTGCAGGAAGTGGATGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR GCA 90 bp TTTAATACAATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTCACCACATCAACACATaGATTGACTCCCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: FNTILEPASEWEVMNSWGHHINT*IDSHCH
Trigger: GTGGCAGTGGGAGTCAATGCATGTGTTGATGTGGTG...ACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563907.5
CDS-3UTR GCA 90 bp ACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGAGTGAGGTCCTTGAATGCAGAATaGTGTGATCTTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: TDHAHIRNTVPGRERRVRSLNAE*CDLSHS
Trigger: GGAATGGGAAAGATCACAGCATTCTGCATTCAAGGA...CCTCACTCTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563907.5
ENST00000567941.5
CDS-3UTR GCA 90 bp GTCATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTTCCTTGAATGCAGAATaGTGTGATCTTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: VMNSWGALRDTRLVSMVSSLNAE*CDLSHS
Trigger: GGAATGGGAAAGATCACAGCATTCTGCATTCAAGGA...AGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563907.5
ENST00000567941.5
CDS-3UTR GCA 90 bp AAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAAACTCATCCACTTCCTaGAATGACTCTGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: KRMSLTMPTSGTPFQEERNSSTS*NDSGGT
Trigger: TGTTCCACCAGAGTCATTGCAGGAAGTGGATGAGTT...TCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
CDS-3UTR GCA 90 bp AAAATTACCCCTAAGAATCTTCCTAATAGTGAGGGTGTACTTCCGAATAGAAGATCCTGCAGCCACGGCTaGCAGCTGGTTGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: KITPKNLPNSEGVLPNRRSCSHG*QLVGPV
Trigger: CACTGGGCCAACCAGCTGGCAGCCGTGGCTGCAGGA...TCTTCTATTCGGAAGTACACCCTCACTATTAGGAAGATTCTTAGGGGTAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp CCTATAACCTATGGAGCCAGGACAGGAAAGCATGATCCTTCAGCTCATGACGCCGATATTCCCTCTCTGTaGCATTCTACTACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PITYGARTGKHDPSAHDADIPSL*HSTTGL
Trigger: CAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATC...GGCGTCATGAGCTGAAGGATCATGCTTTCCTGTCCTGGCTCCATAGGTTATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp GATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGAGATATTCCCTCTCTGTaGCATTCTACTACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: DVTDHAHIRNTVPGRERRDIPSL*HSTTGL
Trigger: CAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATC...TCTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp AAGAGTCCTTCGGCTGAAATGGCATCTCCAAGGCCTACAGTTCGAATGGGGTCTGATATTCCCTCTCTGTaGCATTCTACTACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: KSPSAEMASPRPTVRMGSDIPSL*HSTTGL
Trigger: CAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATC...AGACCCCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGCCGAAGGACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp TGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGAAATATGTTTTTATGGAGTTaGCAACAGGCTGGAATGTAC +
Preference number: 4 (lower is better)
Translates to: WPSVHPQLPGCGRPACGNMFLWS*QQAGMY
Trigger: GTACATTCCAGCCTGTTGGCAACTCCATAAAAACAT...ATTTCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp TTTAATACAATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTTCCTACTCAAGCTGCTaGCCACATCTGAAGGGATAC +
Preference number: 4 (lower is better)
Translates to: FNTILEPASEWEVMNSWGSYSSC*PHLKGY
Trigger: GTATCCCTTCAGATGTGGGCAGCAGCTTGAGTAGGA...ACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569693.5
CDS-3UTR CCA 90 bp TCTGAAATGTTTTTATGGAGTTGCCAACAGGCTGGAATGTACCTGATACAGTTTCGAGCCTGGCAGCTCTaGCTCCAGCAGGAAGACGCA +
Preference number: 4 (lower is better)
Translates to: SEMFLWSCQQAGMYLIQFRAWQL*LQQEDA
Trigger: TGCGTCTTCCTGCTGGAGCCAGAGCTGCCAGGCTCG...AAACTGTATCAGGTACATTCCAGCCTGTTGGCAACTCCATAAAAACATTTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
CDS-3UTR CCA 90 bp TGTTCTTTCAAGATCCAGAAGAGGATGTCACTGACCATGCCCACATCAGGAACAGGTCCAGAGGCTGACTaGGTGAGAAATAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: CSFKIQKRMSLTMPTSGTGPEAD*VRNNSS
Trigger: GGAGCTGTTATTTCTCACCCAGTCAGCCTCTGGACC...TGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCTGGATCTTGAAAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp GGTGTGAAGTGGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTTGTTTACCAGCGTGTGGAAATaGATCCTGGTGAGATCCGAG +
Preference number: 4 (lower is better)
Translates to: GVKWKDIPSLCHSTTGLFTSVWK*ILVRSE
Trigger: CTCGGATCTCACCAGGATCCATTTCCACACGCTGGT...AAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACTTCACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp AATACTGGTGTGAAGTGGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCACCAGCGTGTGGAAATaGATCCTGGTGAGATCCGAG +
Preference number: 4 (lower is better)
Translates to: NTGVKWKDIPSLCHSTTGTSVWK*ILVRSE
Trigger: CTCGGATCTCACCAGGATCCATTTCCACACGCTGGT...GCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACTTCACACCAGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp AATAGAAGAGTCCTTCGGCTGAAATGGCATCTCCAAGGCCTACAGTTCGAATGGGGTTTAATACAATCCTaGAGCCTGCCTCCGAATGGG +
Preference number: 4 (lower is better)
Translates to: NRRVLRLKWHLQGLQFEWGLIQS*SLPPNG
Trigger: CCCATTCGGAGGCAGGCTCCAGGATTGTATTAAACC...CCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGCCGAAGGACTCTTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp CAGGAACACCGTTCCAGGAAGAGAGAGAAGAGTGAGGTCCAGAGGCTGACTGGGTTTACACACCAATACTaGTGTGAAGTGGAAGGATAT +
Preference number: 4 (lower is better)
Translates to: QEHRSRKREKSEVQRLTGFTHQY*CEVEGY
Trigger: ATATCCTTCCACTTCACACCAGTATTGGTGTGTAAA...CCCAGTCAGCCTCTGGACCTCACTCTTCTCTCTCTTCCTGGAACGGTGTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp TGGCAGAAAGCACATCCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAAGGCCTACAGTTCGAATaGGGTCTTTACACACCAATA +
Preference number: 4 (lower is better)
Translates to: WQKAHPKLGNEVQPGPREGLQFE*GLYTPI
Trigger: TATTGGTGTGTAAAGACCCCATTCGAACTGTAGGCC...TTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGGATGTGCTTTCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp CCTATAACCTATGGAGCCAGGACAGGAAAGCATGATCCTTCAGCTCATGACGCCGAGTTGCCAACAGGCTaGAATGTACCTGATACAGTT +
Preference number: 4 (lower is better)
Translates to: PITYGARTGKHDPSAHDAELPTG*NVPDTV
Trigger: AACTGTATCAGGTACATTCCAGCCTGTTGGCAACTC...GGCGTCATGAGCTGAAGGATCATGCTTTCCTGTCCTGGCTCCATAGGTTATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp TGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGCTTTTCTTTCCAGATCATTCCTTaGATGCAGAATGCTGTGATC +
Preference number: 4 (lower is better)
Translates to: CWVSGRALLKWARKNCFSFQIIP*MQNAVI
Trigger: GATCACAGCATTCTGCATTCAAGGAATGATCTGGAA...AGAAAAGCAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311669.12
ENST00000567941.5
CDS-3UTR TCA 90 bp AATACTGGTGTGAAGTGGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCCCCTTCCCCATGAAGTaGATGAAGGCTTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: NTGVKWKDIPSLCHSTTGPFPMK*MKASSR
Trigger: TCTGGAAGAAGCCTTCATTCACTTCATGGGGAAGGG...GCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACTTCACACCAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563907.5
ENST00000567941.5
CDS-3UTR TCA 90 bp GAAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGCTTGATACTCTAAAATaGGGTGGAACTCATCCACTT +
Preference number: 4 (lower is better)
Translates to: EEDVTDHAHIRNTVPGRELDTLK*GGTHPL
Trigger: AAGTGGATGAGTTCCACCTCATTTTAGAGTATCAAG...CTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
CDS-3UTR TCA 90 bp GGTGTGAAGTGGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTTGTTTCACTCCTCCCCTGCTTaGTACTCTAAAATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GVKWKDIPSLCHSTTGLFHSSPA*YSKMRW
Trigger: CCACCTCATTTTAGAGTATCAAGCAGGGGAGGAGTG...AAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACTTCACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
CDS-3UTR TCA 90 bp TTTACTCCTCCCATGTTCTTTCAAGATCCAGAAGAGGATGTCACTGACCATGCCCAGAGGCTGACTGGGTaGGAAATAACAGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: FTPPMFFQDPEEDVTDHAQRLTG*EITAPV
Trigger: AACAGGAGCTGTTATTTCTCACCCAGTCAGCCTCTG...GGCATGGTCAGTGACATCCTCTTCTGGATCTTGAAAGAACATGGGAGGAGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp GGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTTGTTTGGGTTTAATAGAAGAGAGAGAAGAGTaGGGTCCAGAGGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: GRIFPLCAILLLACLGLIEEREE*GPEADW
Trigger: CCAGTCAGCCTCTGGACCTCACTCTTCTCTCTCTTC...TATTAAACCCAAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp AATACTGGTGTGAAGTGGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCAGAAGAGGATGTCACTaGCCATGCCCACATCAGGAA +
Preference number: 4 (lower is better)
Translates to: NTGVKWKDIPSLCHSTTGRRGCH*PCPHQE
Trigger: TTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCT...GCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACTTCACACCAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CATCCACTTCCTGCAATGACTCTGGTGGAACAAAGACATTGTCATCAAGAAGCTGGAAATGGATCCTGGTaGGATCCGAGGCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: HPLPAMTLVEQRHCHQEAGNGSW*DPRLCF
Trigger: AAAGCAGAGCCTCGGATCTCACCAGGATCCATTTCC...AGCTTCTTGATGACAATGTCTTTGTTCCACCAGAGTCATTGCAGGAAGTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569517.5
CDS-3UTR TCA 90 bp CCCCTAAGAATCTTCCTAATAGTGAGGGTGTACTTCCGAATAGAAGAGTCCTTCGGAAATGGATCCTGGTaGGATCCGAGGCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PLRIFLIVRVYFRIEESFGNGSW*DPRLCF
Trigger: AAAGCAGAGCCTCGGATCTCACCAGGATCCATTTCC...GAAGGACTCTTCTATTCGGAAGTACACCCTCACTATTAGGAAGATTCTTAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp TCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTAGGCTGGAATGTACCTaGTACAGTTTAATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SHEAFLETRMLGEWACTSRLECT*YSLICF
Trigger: AAAGCAGATTAAACTGTATCAGGTACATTCCAGCCT...AGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp GTCATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTAGGCTGGAATGTACCTaGTACAGTTTAATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VMNSWGALRDTRLVSMVSRLECT*YSLICF
Trigger: AAAGCAGATTAAACTGTATCAGGTACATTCCAGCCT...AGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp TTTACTCCTCCCATGTTCTTTCAAGATCCAGAAGAGGATGTCACTGACCATGCCAAGAGGAACCTCACATaGGGCTTTCCTAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: FTPPMFFQDPEEDVTDHAKRNLT*GFPRDQ
Trigger: CTGGTCTCTAGGAAAGCCTCATGTGAGGTTCCTCTT...GGCATGGTCAGTGACATCCTCTTCTGGATCTTGAAAGAACATGGGAGGAGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp CCTGCAATGACTCTGGTGGAACAAAGACATTGTCATCAAGAAGCTCATGTAGCTCCATGGGCACTGAGCTaGAAGAAAGAGGAACCTCAC +
Preference number: 4 (lower is better)
Translates to: PAMTLVEQRHCHQEAHVAPWALS*KKEEPH
Trigger: GTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGG...AGCTACATGAGCTTCTTGATGACAATGTCTTTGTTCCACCAGAGTCATTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR TCA 90 bp AATACTGGTGTGAAGTGGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCACGGAATGGAAATCATaGTCCTTGCCCATGGGCACT +
Preference number: 4 (lower is better)
Translates to: NTGVKWKDIPSLCHSTTGTEWKS*SLPMGT
Trigger: AGTGCCCATGGGCAAGGATCATGATTTCCATTCCGT...GCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACTTCACACCAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp TCATCAAGAAGCTCATGTAGCTTTGGACCAACTGGACCGCAAAGAAGAACCGGGAACTCATCCACTTCCTaGAATGACTCTGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: SSRSSCSFGPTGPQRRTGNSSTS*NDSGGT
Trigger: TGTTCCACCAGAGTCATTGCAGGAAGTGGATGAGTT...CCCGGTTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569517.5
CDS-3UTR GCA 90 bp AGTGGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTTGTTTGGGTTTAGTGTCCATCCACAGTTaGCAGGATGTGGTAGACCAG +
Preference number: 4 (lower is better)
Translates to: SGRIFPLCAILLLACLGLVSIHS*QDVVDQ
Trigger: CTGGTCTACCACATCCTGGCAACTGTGGATGGACAC...TAAACCCAAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp AACTGCTTTTCTCCAGCTGACATGCTCTCAGGGGTGAAGAAGTTTAGCTTAAAACATGAACTCTTGGGGTaGCCTCAGAGACACTCGGCT +
Preference number: 4 (lower is better)
Translates to: NCFSPADMLSGVKKFSLKHELLG*PQRHSA
Trigger: AGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATG...TTTTAAGCTAAACTTCTTCACCCCTGAGAGCATGTCAGCTGGAGAAAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp CACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCATGTTTTTATGGAGTTaGCAACAGGCTGGAATGTAC +
Preference number: 4 (lower is better)
Translates to: HSCQDVVDQRVEMDPGEIMFLWS*QQAGMY
Trigger: GTACATTCCAGCCTGTTGGCAACTCCATAAAAACAT...GATCTCACCAGGATCCATTTCCACACGCTGGTCTACCACATCCTGGCAACTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp ACTTCCTGCAATGACTCTGGTGGAACAAAGACATTGTCATCAAGAAGCTCATGTTTGGGTGAGTGGGCGTaGACTTCTCAAGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: TSCNDSGGTKTLSSRSSCLGEWA*TSQVGK
Trigger: CTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAA...ACATGAGCTTCTTGATGACAATGTCTTTGTTCCACCAGAGTCATTGCAGGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR GCA 90 bp TCTGAAATGTTTTTATGGAGTTGCCAACAGGCTGGAATGTACCTGATACAGTTTCTCCCCAGCCCCTGCTaGCATCATAAAGCACGGGAG +
Preference number: 4 (lower is better)
Translates to: SEMFLWSCQQAGMYLIQFLPSPC*HHKARE
Trigger: CTCCCGTGCTTTATGATGGCAGCAGGGGCTGGGGAG...AAACTGTATCAGGTACATTCCAGCCTGTTGGCAACTCCATAAAAACATTTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp TTTAATACAATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTAGGCTTCCAGACAACTaGAGAATGAAAGAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: FNTILEPASEWEVMNSWGRLPDN*RMKESL
Trigger: GAGGGACTCTTTCATTCTGCAGTTGTCTGGAAGCCT...ACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp GATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGATACTCTAAAATGAGGTaGAACTCATCCACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: DVTDHAHIRNTVPGRERRYSKMR*NSSTSC
Trigger: GCAGGAAGTGGATGAGTTCCACCTCATTTTAGAGTA...TCTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
CDS-3UTR CCA 90 bp TGGCCAGCTCTAGGTGAACTGGAATACCAGTGGGGATGTCAGAAATGGAGGTTATGGGGATGTCAGAAATaGAGGTTACAACCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: WPALGELEYQWGCQKWRLWGCQK*RLQPPR
Trigger: TCTTGGAGGTTGTAACCTCCATTTCTGACATCCCCA...TAACCTCCATTTCTGACATCCCCACTGGTATTCCAGTTCACCTAGAGCTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
CDS-3UTR CCA 90 bp CAAAGACATTGTCATCAAGAAGCTCATGTAGCTTTGGACCAACTGGACCGCAAAGGTCCAGAGGCTGACTaGGTGAGAAATAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: QRHCHQEAHVALDQLDRKGPEAD*VRNNSS
Trigger: GGAGCTGTTATTTCTCACCCAGTCAGCCTCTGGACC...TTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATGTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569517.5
CDS-3UTR CCA 90 bp TGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGCTTTTCTAATACTGGTGTGAAGTaGAAGGATATTCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: CWVSGRALLKWARKNCFSNTGVK*KDIPSL
Trigger: CAGAGAGGGAATATCCTTCCACTTCACACCAGTATT...AGAAAAGCAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp TACTGGCCAGCTCTAGGTGAACTGGAATACCAGTGGGGATGTCAGAAATGGAGGAATACTGGTGTGAAGTaGAAGGATATTCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: YWPALGELEYQWGCQKWRNTGVK*KDIPSL
Trigger: CAGAGAGGGAATATCCTTCCACTTCACACCAGTATT...CCTCCATTTCTGACATCCCCACTGGTATTCCAGTTCACCTAGAGCTGGCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp GCTGAAATGGCATCTCCAAGGCCTACAGTTCGAATGGGGTCTTTACACACCAATCGTGCACTTCTCAAGTaGGCAAGGAAGAACTGCTTT +
Preference number: 4 (lower is better)
Translates to: AEMASPRPTVRMGSLHTNRALLK*ARKNCF
Trigger: AAAGCAGTTCTTCCTTGCCCACTTGAGAAGTGCACG...ATTGGTGTGTAAAGACCCCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp TACTGGCCAGCTCTAGGTGAACTGGAATACCAGTGGGGATGTCAGAAATGGAGGCTTGATACTCTAAAATaGGGTGGAACTCATCCACTT +
Preference number: 4 (lower is better)
Translates to: YWPALGELEYQWGCQKWRLDTLK*GGTHPL
Trigger: AAGTGGATGAGTTCCACCTCATTTTAGAGTATCAAG...CCTCCATTTCTGACATCCCCACTGGTATTCCAGTTCACCTAGAGCTGGCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
CDS-3UTR TCA 90 bp ACTTCCTGCAATGACTCTGGTGGAACAAAGACATTGTCATCAAGAAGCTCATGTCTTGCCCATGGGCACTaGGCTGAAAGAAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: TSCNDSGGTKTLSSRSSCLAHGH*AERKRN
Trigger: GTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAAG...ACATGAGCTTCTTGATGACAATGTCTTTGTTCCACCAGAGTCATTGCAGGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR TCA 90 bp AGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTTGTTTGGGTTTAATACAATCCAAAGCTAGGCAATaGAGTTCAGCCTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: RIFPLCAILLLACLGLIQSKARQ*SSAWAT
Trigger: CGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGGA...TTGTATTAAACCCAAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp TTTAATACAATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGAAAGACCTGCTGCTTaGTACTCTAAAATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FNTILEPASEWEVMNSWGERPAA*YSKMRW
Trigger: CCACCTCATTTTAGAGTATCAAGCAGCAGGTCTTTC...ACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563907.5
CDS-3UTR GCA 90 bp GCTGAAATGGCATCTCCAAGGCCTACAGTTCGAATGGGGTCTTTACACACCAATAACTCATCCACTTCCTaGAATGACTCTGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: AEMASPRPTVRMGSLHTNNSSTS*NDSGGT
Trigger: TGTTCCACCAGAGTCATTGCAGGAAGTGGATGAGTT...ATTGGTGTGTAAAGACCCCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
CDS-3UTR GCA 90 bp TGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGCTTTTCTATGTTTTTATGGAGTTaGCAACAGGCTGGAATGTAC +
Preference number: 4 (lower is better)
Translates to: CWVSGRALLKWARKNCFSMFLWS*QQAGMY
Trigger: GTACATTCCAGCCTGTTGGCAACTCCATAAAAACAT...AGAAAAGCAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp TGTTCTTTCAAGATCCAGAAGAGGATGTCACTGACCATGCCCACATCAGGAACAAGGCTTCCAGACAACTaGAGAATGAAAGAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: CSFKIQKRMSLTMPTSGTRLPDN*RMKESL
Trigger: GAGGGACTCTTTCATTCTGCAGTTGTCTGGAAGCCT...TGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCTGGATCTTGAAAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp TCATCAAGAAGCTCATGTAGCTTTGGACCAACTGGACCGCAAAGAAGAACCGGGTACTCTAAAATGAGGTaGAACTCATCCACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SSRSSCSFGPTGPQRRTGYSKMR*NSSTSC
Trigger: GCAGGAAGTGGATGAGTTCCACCTCATTTTAGAGTA...CCCGGTTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569517.5
CDS-3UTR CCA 90 bp CCCCTAAGAATCTTCCTAATAGTGAGGGTGTACTTCCGAATAGAAGAGTCCTTCATGAATCGGTTGGCATaGGGAGCTTTTAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: PLRIFLIVRVYFRIEESFMNRLA*GAFNWP
Trigger: GGGCCAGTTAAAAGCTCCCCATGCCAACCGATTCAT...GAAGGACTCTTCTATTCGGAAGTACACCCTCACTATTAGGAAGATTCTTAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
CDS-3UTR CCA 90 bp CCCCTAAGAATCTTCCTAATAGTGAGGGTGTACTTCCGAATAGAAGAGTCCTTCTCAGAGACACTCGGCTaGTGTCTATGGTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: PLRIFLIVRVYFRIEESFSETLG*CLWFLW
Trigger: CCACAGAAACCATAGACACCAGCCGAGTGTCTCTGA...GAAGGACTCTTCTATTCGGAAGTACACCCTCACTATTAGGAAGATTCTTAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp AATACAATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCTTTACACACCAATACTaGTGTGAAGTGGAAGGATAT +
Preference number: 4 (lower is better)
Translates to: NTILEPASEWEVMNSWGAFTHQY*CEVEGY
Trigger: ATATCCTTCCACTTCACACCAGTATTGGTGTGTAAA...GGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp GCTGAAATGGCATCTCCAAGGCCTACAGTTCGAATGGGGTCTTTACACACCAATGAGTTGCCAACAGGCTaGAATGTACCTGATACAGTT +
Preference number: 4 (lower is better)
Translates to: AEMASPRPTVRMGSLHTNELPTG*NVPDTV
Trigger: AACTGTATCAGGTACATTCCAGCCTGTTGGCAACTC...ATTGGTGTGTAAAGACCCCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp ACAAAGACATTGTCATCAAGAAGCTCATGTAGCTTTGGACCAACTGGACCGCAACCAGCCTATAACCTATaGAGCCAGGACAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: TKTLSSRSSCSFGPTGPQPAYNL*SQDRKA
Trigger: TGCTTTCCTGTCCTGGCTCCATAGGTTATAGGCTGG...TTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATGTCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR CCA 90 bp TGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGAAATAAAAATCAGTCTTTATaGCAGAAAGCACATCCAAAG +
Preference number: 4 (lower is better)
Translates to: WPSVHPQLPGCGRPACGNKNQSL*QKAHPK
Trigger: CTTTGGATGTGCTTTCTGCCATAAAGACTGATTTTT...ATTTCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR CAA 72 bp AAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTaGTTTGGGTTTAATACAATCCTGGAGCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: KDIPSLCHSTTG*FGFNTILEPAS
Trigger: GGAGGCAGGCTCCAGGATTGTATTAAACCCAAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR CAA 72 bp GAACAAAGACATTGTCATCAAGAAGCTCATGTAGCTTaGGACCAACTGGACCGCAAAGAAGAACCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: EQRHCHQEAHVA*DQLDRKEEPGS
Trigger: GGAACCCGGTTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATGTCTTTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562823.1
CDS-3UTR TCA 90 bp TCTGAAATGTTTTTATGGAGTTGCCAACAGGCTGGAATGTACCTGATACAGTTTGAAGAGAGAGAAGAGTaGGGTCCAGAGGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: SEMFLWSCQQAGMYLIQFEEREE*GPEADW
Trigger: CCAGTCAGCCTCTGGACCTCACTCTTCTCTCTCTTC...AAACTGTATCAGGTACATTCCAGCCTGTTGGCAACTCCATAAAAACATTTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp AATACTGGTGTGAAGTGGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCAACTCATCCACTTCCTaGAATGACTCTGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: NTGVKWKDIPSLCHSTTGNSSTS*NDSGGT
Trigger: TGTTCCACCAGAGTCATTGCAGGAAGTGGATGAGTT...GCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACTTCACACCAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
CDS-3UTR GCA 90 bp AGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTTGTTTGGGTTTAATACAACGGTTTAGCACAGGATaGAGAGGCTCAGGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: RIFPLCAILLLACLGLIQRFSTG*RGSGKK
Trigger: CTTCTTGCCTGAGCCTCTGCATCCTGTGCTAAACCG...TTGTATTAAACCCAAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569693.5
CDS-3UTR CCA 90 bp TGTTCTTTCAAGATCCAGAAGAGGATGTCACTGACCATGCCCACATCAGGAACATGGGGATGTCAGAAATaGAGGTTACAACCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: CSFKIQKRMSLTMPTSGTWGCQK*RLQPPR
Trigger: TCTTGGAGGTTGTAACCTCCATTTCTGACATCCCCA...TGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCTGGATCTTGAAAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
CDS-3UTR CCA 90 bp GGAACTCATCCACTTCCTGCAATGACTCTGGTGGAACAAAGACATTGTCATCAAGAACTGGAATACCAGTaGGGATGTCAGAAATGGAGG +
Preference number: 4 (lower is better)
Translates to: GTHPLPAMTLVEQRHCHQELEYQ*GCQKWR
Trigger: CCTCCATTTCTGACATCCCCACTGGTATTCCAGTTC...TTGATGACAATGTCTTTGTTCCACCAGAGTCATTGCAGGAAGTGGATGAGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569517.5
CDS-3UTR CCA 90 bp TGCAATGACTCTGGTGGAACAAAGACATTGTCATCAAGAAGCTCATGTAGCTTTGGTCCAGAGGCTGACTaGGTGAGAAATAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: CNDSGGTKTLSSRSSCSFGPEAD*VRNNSS
Trigger: GGAGCTGTTATTTCTCACCCAGTCAGCCTCTGGACC...AAAGCTACATGAGCTTCTTGATGACAATGTCTTTGTTCCACCAGAGTCATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569517.5
CDS-3UTR CCA 90 bp TTAAATATTGTCATTGTAACACGGAATGGAAATCATGATCCTTGCCCATGGGCATGTCTATGGTTTCTGTaGCGCAGGCCTGTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LNIVIVTRNGNHDPCPWACLWFL*RRPVSQ
Trigger: CTGGGACACAGGCCTGCGCCACAGAAACCATAGACA...TGCCCATGGGCAAGGATCATGATTTCCATTCCGTGTTACAATGACAATATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp TGGCAGAAAGCACATCCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAATTTACACACCAATACTaGTGTGAAGTGGAAGGATAT +
Preference number: 4 (lower is better)
Translates to: WQKAHPKLGNEVQPGPREFTHQY*CEVEGY
Trigger: ATATCCTTCCACTTCACACCAGTATTGGTGTGTAAA...TTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGGATGTGCTTTCTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp TTTACTCCTCCCATGTTCTTTCAAGATCCAGAAGAGGATGTCACTGACCATGCCGAGTTGCCAACAGGCTaGAATGTACCTGATACAGTT +
Preference number: 4 (lower is better)
Translates to: FTPPMFFQDPEEDVTDHAELPTG*NVPDTV
Trigger: AACTGTATCAGGTACATTCCAGCCTGTTGGCAACTC...GGCATGGTCAGTGACATCCTCTTCTGGATCTTGAAAGAACATGGGAGGAGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR CAA 72 bp ATATTCCCTCTCTGTGCCATTCTACTACTGGCTTGTTaGGGTTTAATACAATCCTGGAGCCTGCCTCCGAAT +
Preference number: 4 (lower is better)
Translates to: IFPLCAILLLAC*GLIQSWSLPPN
Trigger: ATTCGGAGGCAGGCTCCAGGATTGTATTAAACCCAAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp AAAATTACCCCTAAGAATCTTCCTAATAGTGAGGGTGTACTTCCGAATAGAAGAGGTCGTGAGAGAAGATaGATCGGTTGGCATGGGGAG +
Preference number: 4 (lower is better)
Translates to: KITPKNLPNSEGVLPNRRGRERR*IGWHGE
Trigger: CTCCCCATGCCAACCGATTCATCTTCTCTCACGACC...TCTTCTATTCGGAAGTACACCCTCACTATTAGGAAGATTCTTAGGGGTAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
CDS-3UTR TCA 90 bp TCATTAAATATTGTCATTGTAACACGGAATGGAAATCATGATCCTTGCCCATGGACCGCGGGAAAGACCTaGTGGACAATGCTGCTCATG +
Preference number: 4 (lower is better)
Translates to: SLNIVIVTRNGNHDPCPWTAGKT*WTMLLM
Trigger: CATGAGCAGCATTGTCCATCAGGTCTTTCCCGCGGT...CCATGGGCAAGGATCATGATTTCCATTCCGTGTTACAATGACAATATTTAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569693.5
CDS-3UTR TCA 90 bp GGACCGCAAAGAAGAACCTTTAAATCTGAGTTGGCTGCAAATTTCTGTCCAATTCAGAGGCTGACTGGGTaGGAAATAACAGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: GPQRRTFKSELAANFCPIQRLTG*EITAPV
Trigger: AACAGGAGCTGTTATTTCTCACCCAGTCAGCCTCTG...AATTGGACAGAAATTTGCAGCCAACTCAGATTTAAAGGTTCTTCTTTGCGGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR TCA 90 bp AGCTCATGTAGCTTTGGACCAACTGGACCGCAAAGAAGAACCTTTAAATCTGAGACACCAATACTGGTGTaGAGTGGAAGGATATTCCCT +
Preference number: 4 (lower is better)
Translates to: SSCSFGPTGPQRRTFKSETPILV*SGRIFP
Trigger: AGGGAATATCCTTCCACTTCACACCAGTATTGGTGT...CTCAGATTTAAAGGTTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR TCA 90 bp GGAACTCATCCACTTCCTGCAATGACTCTGGTGGAACAAAGACATTGTCATCAATGGGGATTTGGGAACTaGGTTTTTAGCTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: GTHPLPAMTLVEQRHCHQWGFGN*VFSSVT
Trigger: TGTCACAGAGCTAAAAACTCAGTTCCCAAATCCCCA...TTGATGACAATGTCTTTGTTCCACCAGAGTCATTGCAGGAAGTGGATGAGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR TCA 90 bp AAAACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAAGACCAGGATGTTGGGTaGGTGGGCGTGCACTTCTCA +
Preference number: 4 (lower is better)
Translates to: KTNSLKAQNEQKSVFMAEDQDVG*VGVHFS
Trigger: TGAGAAGTGCACGCCCACTCACCCAACATCCTGGTC...TTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp TCTGAAATGTTTTTATGGAGTTGCCAACAGGCTGGAATGTACCTGATACAGTTTCTTGCCCATGGGCACTaGGCTGAAAGAAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: SEMFLWSCQQAGMYLIQFLAHGH*AERKRN
Trigger: GTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAAG...AAACTGTATCAGGTACATTCCAGCCTGTTGGCAACTCCATAAAAACATTTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp AACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAAAGCATGAACTCTTGGGGTaGCCTCAGAGACACTCGGCT +
Preference number: 4 (lower is better)
Translates to: NKFLEGSERTKISLYGRKHELLG*PQRHSA
Trigger: AGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATG...CTTTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp CCCCTAAGAATCTTCCTAATAGTGAGGGTGTACTTCCGAATAGAAGAGTCCTTCGATATTCCCTCTCTGTaGCATTCTACTACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PLRIFLIVRVYFRIEESFDIPSL*HSTTGL
Trigger: CAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATC...GAAGGACTCTTCTATTCGGAAGTACACCCTCACTATTAGGAAGATTCTTAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp AGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTTGTTTGGGTTTAATACAATATTCATGGCCCCGTTaGAGAGGTCGTGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: RIFPLCAILLLACLGLIQYSWPR*RGRERR
Trigger: TCTTCTCTCACGACCTCTCCAACGGGGCCATGAATA...TTGTATTAAACCCAAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569534.5
CDS-3UTR CCA 90 bp TTAAATATTGTCATTGTAACACGGAATGGAAATCATGATCCTTGCCCATGGGCAGAGCCTGCCTCCGAATaGGAAGTCATGAACTCTTGG +
Preference number: 4 (lower is better)
Translates to: LNIVIVTRNGNHDPCPWAEPASE*EVMNSW
Trigger: CCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTC...TGCCCATGGGCAAGGATCATGATTTCCATTCCGTGTTACAATGACAATATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp TGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGCTTTTCTAAAAATCAGTCTTTATaGCAGAAAGCACATCCAAAG +
Preference number: 4 (lower is better)
Translates to: CWVSGRALLKWARKNCFSKNQSL*QKAHPK
Trigger: CTTTGGATGTGCTTTCTGCCATAAAGACTGATTTTT...AGAAAAGCAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
3UTR CAA 72 bp TCCACTTCCTGCAATGACTCTGGTGGAACAAAGACATaGTCATCAAGAAGCTCATGTAGCTTTGGACCAACT +
Preference number: 4 (lower is better)
Translates to: STSCNDSGGTKT*SSRSSCSFGPT
Trigger: AGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATGTCTTTGTTCCACCAGAGTCATTGCAGGAAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562286.1
ENST00000567941.5
ENST00000569517.5
CDS-3UTR TCA 90 bp AAAACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAACCGAATGGGAAGTCATaGACTCTTGGGGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: KTNSLKAQNEQKSVFMAEPNGKS*TLGVPS
Trigger: TGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGG...TTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp AAAACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAAGAAGAGTCCTTCGGCTaGAATGGCATCTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: KTNSLKAQNEQKSVFMAEEESFG*NGISKA
Trigger: GGCCTTGGAGATGCCATTTCAGCCGAAGGACTCTTC...TTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp AAAATTACCCCTAAGAATCTTCCTAATAGTGAGGGTGTACTTCCGAATAGAAGAGTGTCCATCCACAGTTaGCAGGATGTGGTAGACCAG +
Preference number: 4 (lower is better)
Translates to: KITPKNLPNSEGVLPNRRVSIHS*QDVVDQ
Trigger: CTGGTCTACCACATCCTGGCAACTGTGGATGGACAC...TCTTCTATTCGGAAGTACACCCTCACTATTAGGAAGATTCTTAGGGGTAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp CAACTGGACCGCAAAGAAGAACCTTTAAATCTGAGTTGGCTGCAAATTTCTGTCGATATTCCCTCTCTGTaGCATTCTACTACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: QLDRKEEPLNLSWLQISVDIPSL*HSTTGL
Trigger: CAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATC...GACAGAAATTTGCAGCCAACTCAGATTTAAAGGTTCTTCTTTGCGGTCCAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR CCA 90 bp TCATTAAATATTGTCATTGTAACACGGAATGGAAATCATGATCCTTGCCCATGGGGTCCAGAGGCTGACTaGGTGAGAAATAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLNIVIVTRNGNHDPCPWGPEAD*VRNNSS
Trigger: GGAGCTGTTATTTCTCACCCAGTCAGCCTCTGGACC...CCATGGGCAAGGATCATGATTTCCATTCCGTGTTACAATGACAATATTTAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp TCATTAAATATTGTCATTGTAACACGGAATGGAAATCATGATCCTTGCCCATGGACCAGCGTGTGGAAATaGATCCTGGTGAGATCCGAG +
Preference number: 4 (lower is better)
Translates to: SLNIVIVTRNGNHDPCPWTSVWK*ILVRSE
Trigger: CTCGGATCTCACCAGGATCCATTTCCACACGCTGGT...CCATGGGCAAGGATCATGATTTCCATTCCGTGTTACAATGACAATATTTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp TCTGAAATGTTTTTATGGAGTTGCCAACAGGCTGGAATGTACCTGATACAGTTTTCAGAGACACTCGGCTaGTGTCTATGGTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SEMFLWSCQQAGMYLIQFSETLG*CLWFLW
Trigger: CCACAGAAACCATAGACACCAGCCGAGTGTCTCTGA...AAACTGTATCAGGTACATTCCAGCCTGTTGGCAACTCCATAAAAACATTTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp AATAGAAGAGTCCTTCGGCTGAAATGGCATCTCCAAGGCCTACAGTTCGAATGGTTTACACACCAATACTaGTGTGAAGTGGAAGGATAT +
Preference number: 4 (lower is better)
Translates to: NRRVLRLKWHLQGLQFEWFTHQY*CEVEGY
Trigger: ATATCCTTCCACTTCACACCAGTATTGGTGTGTAAA...CCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGCCGAAGGACTCTTCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp AACTGCTTTTCTCCAGCTGACATGCTCTCAGGGGTGAAGAAGTTTAGCTTAAAAGGCCTACAGTTCGAATaGGGTCTTTACACACCAATA +
Preference number: 4 (lower is better)
Translates to: NCFSPADMLSGVKKFSLKGLQFE*GLYTPI
Trigger: TATTGGTGTGTAAAGACCCCATTCGAACTGTAGGCC...TTTTAAGCTAAACTTCTTCACCCCTGAGAGCATGTCAGCTGGAGAAAAGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp TTAAATATTGTCATTGTAACACGGAATGGAAATCATGATCCTTGCCCATGGGCAAAGTTTCCTTATCACTaGAGAAGCGCTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LNIVIVTRNGNHDPCPWAKFPYH*RSAQQL
Trigger: CAGCTGCTGAGCGCTTCTTCAGTGATAAGGAAACTT...TGCCCATGGGCAAGGATCATGATTTCCATTCCGTGTTACAATGACAATATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311669.12
ENST00000567941.5
CDS-3UTR TCA 90 bp AACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAAAGACGGAATGGAAATCATaGTCCTTGCCCATGGGCACT +
Preference number: 4 (lower is better)
Translates to: NKFLEGSERTKISLYGRKTEWKS*SLPMGT
Trigger: AGTGCCCATGGGCAAGGATCATGATTTCCATTCCGT...CTTTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp AATGACTCTGGTGGAACAAAGACATTGTCATCAAGAAGCTCATGTAGCTTTGGAAACTCATCCACTTCCTaGAATGACTCTGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: NDSGGTKTLSSRSSCSFGNSSTS*NDSGGT
Trigger: TGTTCCACCAGAGTCATTGCAGGAAGTGGATGAGTT...TCCAAAGCTACATGAGCTTCTTGATGACAATGTCTTTGTTCCACCAGAGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562286.1
ENST00000567941.5
ENST00000569517.5
CDS-3UTR CCA 90 bp CAAGAAGCTCATGTAGCTTTGGACCAACTGGACCGCAAAGAAGAACCTTTAAATTACTCTAAAATGAGGTaGAACTCATCCACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QEAHVALDQLDRKEEPLNYSKMR*NSSTSC
Trigger: GCAGGAAGTGGATGAGTTCCACCTCATTTTAGAGTA...ATTTAAAGGTTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR CCA 90 bp AACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAAAGATGAATCGGTTGGCATaGGGAGCTTTTAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: NKFLEGSERTKISLYGRKMNRLA*GAFNWP
Trigger: GGGCCAGTTAAAAGCTCCCCATGCCAACCGATTCAT...CTTTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
CDS-3UTR CCA 90 bp TCTGAAATGTTTTTATGGAGTTGCCAACAGGCTGGAATGTACCTGATACAGTTTGAACTGGAATACCAGTaGGGATGTCAGAAATGGAGG +
Preference number: 4 (lower is better)
Translates to: SEMFLWSCQQAGMYLIQFELEYQ*GCQKWR
Trigger: CCTCCATTTCTGACATCCCCACTGGTATTCCAGTTC...AAACTGTATCAGGTACATTCCAGCCTGTTGGCAACTCCATAAAAACATTTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp AACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAAAGGAAGTCATGAACTCTTaGGGTGCCCTCAGAGACACT +
Preference number: 4 (lower is better)
Translates to: NKFLEGSERTKISLYGRKEVMNS*GALRDT
Trigger: AGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTC...CTTTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp TCTGAAATGTTTTTATGGAGTTGCCAACAGGCTGGAATGTACCTGATACAGTTTTGGGGATTTGGGAACTaGGTTTTTAGCTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: SEMFLWSCQQAGMYLIQFWGFGN*VFSSVT
Trigger: TGTCACAGAGCTAAAAACTCAGTTCCCAAATCCCCA...AAACTGTATCAGGTACATTCCAGCCTGTTGGCAACTCCATAAAAACATTTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp AAAACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAATACAATCCTGGAGCCTaGCTCCGAATGGGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: KTNSLKAQNEQKSVFMAEYNPGA*LRMGSH
Trigger: ATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTA...TTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp TCATTAAATATTGTCATTGTAACACGGAATGGAAATCATGATCCTTGCCCATGGTGGGGATTTGGGAACTaGGTTTTTAGCTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: SLNIVIVTRNGNHDPCPWWGFGN*VFSSVT
Trigger: TGTCACAGAGCTAAAAACTCAGTTCCCAAATCCCCA...CCATGGGCAAGGATCATGATTTCCATTCCGTGTTACAATGACAATATTTAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR GCA 90 bp TCTGAAATGTTTTTATGGAGTTGCCAACAGGCTGGAATGTACCTGATACAGTTTTCCTTGAATGCAGAATaGTGTGATCTTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: SEMFLWSCQQAGMYLIQFSLNAE*CDLSHS
Trigger: GGAATGGGAAAGATCACAGCATTCTGCATTCAAGGA...AAACTGTATCAGGTACATTCCAGCCTGTTGGCAACTCCATAAAAACATTTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311669.12
ENST00000567941.5
CDS-3UTR CCA 90 bp TTAAATATTGTCATTGTAACACGGAATGGAAATCATGATCCTTGCCCATGGGCATACTCTAAAATGAGGTaGAACTCATCCACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LNIVIVTRNGNHDPCPWAYSKMR*NSSTSC
Trigger: GCAGGAAGTGGATGAGTTCCACCTCATTTTAGAGTA...TGCCCATGGGCAAGGATCATGATTTCCATTCCGTGTTACAATGACAATATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
3UTR CAA 72 bp GAACAAAGACATTGTCATCAAGAAGCTCATGTAGCTTaGGACCAACTGGACCGCAAAGAAGAACCTTTAAAT +
Preference number: 4 (lower is better)
Translates to: EQRHCHQEAHVA*DQLDRKEEPLN
Trigger: ATTTAAAGGTTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATGTCTTTGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562286.1
ENST00000567941.5
CDS-3UTR GCA 90 bp AAAACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAAAACTCATCCACTTCCTaGAATGACTCTGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: KTNSLKAQNEQKSVFMAENSSTS*NDSGGT
Trigger: TGTTCCACCAGAGTCATTGCAGGAAGTGGATGAGTT...TTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
CDS-3UTR GCA 90 bp TTAAATATTGTCATTGTAACACGGAATGGAAATCATGATCCTTGCCCATGGGCAATGTTTTTATGGAGTTaGCAACAGGCTGGAATGTAC +
Preference number: 4 (lower is better)
Translates to: LNIVIVTRNGNHDPCPWAMFLWS*QQAGMY
Trigger: GTACATTCCAGCCTGTTGGCAACTCCATAAAAACAT...TGCCCATGGGCAAGGATCATGATTTCCATTCCGTGTTACAATGACAATATTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp AACTGCTTTTCTCCAGCTGACATGCTCTCAGGGGTGAAGAAGTTTAGCTTAAAAAAAAATCAGTCTTTATaGCAGAAAGCACATCCAAAG +
Preference number: 4 (lower is better)
Translates to: NCFSPADMLSGVKKFSLKKNQSL*QKAHPK
Trigger: CTTTGGATGTGCTTTCTGCCATAAAGACTGATTTTT...TTTTAAGCTAAACTTCTTCACCCCTGAGAGCATGTCAGCTGGAGAAAAGCAGTT
39% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CCA 90 bp AGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTTGTTTGGGTTTAATACAAAAAAATCAGTCTTTATaGCAGAAAGCACATCCAAAG +
Preference number: 4 (lower is better)
Translates to: RIFPLCAILLLACLGLIQKNQSL*QKAHPK
Trigger: CTTTGGATGTGCTTTCTGCCATAAAGACTGATTTTT...TTGTATTAAACCCAAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR TCA 90 bp AAAACAAATTCCTTGAAGGCTCAGAACGAACAAAAATCAGTCTTTATGGCAGAACTTGATACTCTAAAATaGGGTGGAACTCATCCACTT +
Preference number: 4 (lower is better)
Translates to: KTNSLKAQNEQKSVFMAELDTLK*GGTHPL
Trigger: AAGTGGATGAGTTCCACCTCATTTTAGAGTATCAAG...TTCTGCCATAAAGACTGATTTTTGTTCGTTCTGAGCCTTCAAGGAATTTGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
CDS GCA 90 bp GCGGCGCCAGCGCCGGACTGGCCGCACGATAAGCGCGTCCCAGGCTaGCGCCAACCGGCCCTCGGGGGAGACGGGTCCCGGGGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: AAPAPDWPHDKRVPG*RQPALGGDGSRGRR
Trigger: CCTGCGCCCCCGGGACCCGTCTCCCCCGAGGGCCGGTTGGCGGCAGCCTGGGACGCGCTTATCGTGCGGCCAGTCCGGCGCTGGCGCCGC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000311669.12
ENST00000456471.3
ENST00000562286.1
ENST00000562823.1
ENST00000563907.5
ENST00000567733.1
ENST00000567941.5
ENST00000569058.1
ENST00000569517.5
ENST00000569534.5
CDS CCA 90 bp CCCCGTTGGCACTCACCCCACTGCCACGCGGCGCCAGCGCCGGACTaGCCGCACGATAAGCGCGTCCCAGGCTGCCGCCAACCGGCCCTC +
Preference number: 5 (lower is better)
Translates to: PRWHSPHCHAAPAPD*PHDKRVPGCRQPAL
Trigger: GAGGGCCGGTTGGCGGCAGCCTGGGACGCGCTTATCGTGCGGCCAGTCCGGCGCTGGCGCCGCGTGGCAGTGGGGTGAGTGCCAACGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS CCA 90 bp CGACCTCCAAGGCCGACCTCGGAGGCTCAGAGACCCAGGCCCCGTTaGCACTCACCCCACTGCCACGCGGCGCCAGCGCCGGACTGGCCG +
Preference number: 5 (lower is better)
Translates to: RPPRPTSEAQRPRPR*HSPHCHAAPAPDWP
Trigger: CGGCCAGTCCGGCGCTGGCGCCGCGTGGCAGTGGGGTGAGTGCCAACGGGGCCTGGGTCTCTGAGCCTCCGAGGTCGGCCTTGGAGGTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS GCA 90 bp ACCTCGGAGGCTCAGAGACCCAGGCCCCGTTGGCACTCACCCCACTaGCACGCGGCGCCAGCGCCGGACTGGCCGCACGATAAGCGCGTC +
Preference number: 5 (lower is better)
Translates to: TSEAQRPRPRWHSPH*HAAPAPDWPHDKRV
Trigger: GACGCGCTTATCGTGCGGCCAGTCCGGCGCTGGCGCCGCGTGGCAGTGGGGTGAGTGCCAACGGGGCCTGGGTCTCTGAGCCTCCGAGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS CCA 90 bp GACCGCAAAGAAGAACCCCACTGCCACGCGGCGCCAGCGCCGGACTaGCCGCACGATAAGCGCGTCCCAGGCTGCCGCCAACCGGCCCTC +
Preference number: 5 (lower is better)
Translates to: DRKEEPHCHAAPAPD*PHDKRVPGCRQPAL
Trigger: GAGGGCCGGTTGGCGGCAGCCTGGGACGCGCTTATCGTGCGGCCAGTCCGGCGCTGGCGCCGCGTGGCAGTGGGGTTCTTCTTTGCGGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569058.1
ENST00000569534.5
CDS-3UTR CAA 90 bp GTCCGACACTTCTCGCCAAGGGGCCAGCGCGGACAGCAGCGCCTCCCGGGGACCGAGACCCAGGCCCCGTaGGCACTCACCCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: VRHFSPRGQRGQQRLPGTETQAP*ALTPLP
Trigger: TGGCAGTGGGGTGAGTGCCAACGGGGCCTGGGTCTC...GGTCCCCGGGAGGCGCTGCTGTCCGCGCTGGCCCCTTGGCGAGAAGTGTCGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS CCA 90 bp AACACATGCATTGACTCCCACTGCCACGCGGCGCCAGCGCCGGACTaGCCGCACGATAAGCGCGTCCCAGGCTGCCGCCAACCGGCCCTC +
Preference number: 5 (lower is better)
Translates to: NTCIDSHCHAAPAPD*PHDKRVPGCRQPAL
Trigger: GAGGGCCGGTTGGCGGCAGCCTGGGACGCGCTTATCGTGCGGCCAGTCCGGCGCTGGCGCCGCGTGGCAGTGGGAGTCAATGCATGTGTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000456471.3
ENST00000563907.5
ENST00000567733.1
CDS-3UTR CAA 90 bp GGCCAGCGCGGACAGCAGCGCCTCCCGGGGACCTCTGAGAAGCCCTGTTTCTGCGAGACCCAGGCCCCGTaGGCACTCACCCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: GQRGQQRLPGTSEKPCFCETQAP*ALTPLP
Trigger: TGGCAGTGGGGTGAGTGCCAACGGGGCCTGGGTCTC...GCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGGCGCTGCTGTCCGCGCTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS-3UTR CAA 90 bp AAGAACCGGGTTCCACTCAGACGTCCGACACTTCTCGCCAAGGGGCCAGCGCGGGAGACCCAGGCCCCGTaGGCACTCACCCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: KNRVPLRRPTLLAKGPARETQAP*ALTPLP
Trigger: TGGCAGTGGGGTGAGTGCCAACGGGGCCTGGGTCTC...CCGCGCTGGCCCCTTGGCGAGAAGTGTCGGACGTCTGAGTGGAACCCGGTTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562823.1
CDS-3UTR CAA 90 bp CAGCGCGGACAGCAGCGCCTCCCGGGGACCTCTGAGAAGCCCTGTTTCTGCGCGGAAGCTCATGTAGCTTaGGACCAACTGGACCGCAAA +
Preference number: 5 (lower is better)
Translates to: QRGQQRLPGTSEKPCFCAEAHVA*DQLDRK
Trigger: TTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTC...CGCGCAGAAACAGGGCTTCTCAGAGGTCCCCGGGAGGCGCTGCTGTCCGCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS-3UTR CAA 90 bp CGGGTTCCACTCAGACGTCCGACACTTCTCGCCAAGGGGCCAGCGCGGACAGCAAGTGTCCATCCACAGTaGCCAGGATGTGGTAGACCA +
Preference number: 5 (lower is better)
Translates to: RVPLRRPTLLAKGPARTASVHPQ*PGCGRP
Trigger: TGGTCTACCACATCCTGGCAACTGTGGATGGACACT...TGCTGTCCGCGCTGGCCCCTTGGCGAGAAGTGTCGGACGTCTGAGTGGAACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569517.5
CDS-3UTR CAA 90 bp TGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGAAATGAGACCCAGGCCCCGTaGGCACTCACCCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: WPSVHPQLPGCGRPACGNETQAP*ALTPLP
Trigger: TGGCAGTGGGGTGAGTGCCAACGGGGCCTGGGTCTC...ATTTCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567941.5
ENST00000569517.5
CDS CCA 90 bp GCCGCAGGAGGTGAAGAACAGAACACCAGGGACAGTTGCCAGGCCTaGCGGAGCCTGATGTGGCTTCTGGTCACATACAGAGTCACAGGG +
Preference number: 5 (lower is better)
Translates to: AAGGEEQNTRDSCQA*RSLMWLLVTYRVTG
Trigger: CCCTGTGACTCTGTATGTGACCAGAAGCCACATCAGGCTCCGCCAGGCCTGGCAACTGTCCCTGGTGTTCTGTTCTTCACCTCCTGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565814.1
CDS GCA 90 bp GAGTCAGGAGCCGCAGGAGGTGAAGAACAGAACACCAGGGACAGTTaGCAGGCCTGGCGGAGCCTGATGTGGCTTCTGGTCACATACAGA +
Preference number: 5 (lower is better)
Translates to: ESGAAGGEEQNTRDS*QAWRSLMWLLVTYR
Trigger: TCTGTATGTGACCAGAAGCCACATCAGGCTCCGCCAGGCCTGGCAACTGTCCCTGGTGTTCTGTTCTTCACCTCCTGCGGCTCCTGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565814.1
CDS-3UTR CAA 90 bp TCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTGGCGCAGCTAGAGACCAGGATGTaGGGTGAGTGGGCGTGCACT +
Preference number: 5 (lower is better)
Translates to: SWGALRDTRLVSMVSVAQLETRM*GEWACT
Trigger: AGTGCACGCCCACTCACCCAACATCCTGGTCTCTAG...CTGCGCCACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS TCA 90 bp CCCATTCCCAGGACTAAGGCCAAGTGCCTGCAAGAGCTTCACCCCTaGGAGCACCACATCAACACATGCATTGACTCCCACTGCCACGCG +
Preference number: 5 (lower is better)
Translates to: PIPRTKAKCLQELHP*EHHINTCIDSHCHA
Trigger: CGCGTGGCAGTGGGAGTCAATGCATGTGTTGATGTGGTGCTCTCAGGGGTGAAGCTCTTGCAGGCACTTGGCCTTAGTCCTGGGAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000456471.3
ENST00000563907.5
ENST00000567733.1
CDS GCA 90 bp TCAAGCTGCTGCCCACATCTGAAGGGATACAGTGAGGTGCCTCACTaGAGCAGGAGGCAAGCTCCACAGCCAGCTGCCAAGATATGTCCC +
Preference number: 5 (lower is better)
Translates to: SSCCPHLKGYSEVPH*SRRQAPQPAAKICP
Trigger: GGGACATATCTTGGCAGCTGGCTGTGGAGCTTGCCTCCTGCTGCAGTGAGGCACCTCACTGTATCCCTTCAGATGTGGGCAGCAGCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562621.1
ENST00000569693.5
CDS CCA 90 bp TTTCAGGCACCTCACAGGAGCCTTGGCTCCAAGCAGGCTGGTTTCTaGCTGAGGAGACCCCAGCAACAATGGCCTAAGGTCAGCATGGCA +
Preference number: 5 (lower is better)
Translates to: FQAPHRSLGSKQAGF*LRRPQQQWPKVSMA
Trigger: TGCCATGCTGACCTTAGGCCATTGTTGCTGGGGTCTCCTCAGCCAGAAACCAGCCTGCTTGGAGCCAAGGCTCCTGTGAGGTGCCTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS-3UTR CAA 90 bp CTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTGGCGCAGGAGTGTCCATCCACAGTaGCCAGGATGTGGTAGACCA +
Preference number: 5 (lower is better)
Translates to: LGVPSETLGWCLWFLWRRSVHPQ*PGCGRP
Trigger: TGGTCTACCACATCCTGGCAACTGTGGATGGACACT...CCTGCGCCACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CAA 90 bp GGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGAGGAAGTCATGAACTCTaGGGGTGCCCTCAGAGACAC +
Preference number: 5 (lower is better)
Translates to: GWPSVHPQLPGCGRPACGGSHEL*GCPQRH
Trigger: GTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCC...TCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CAA 90 bp GGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTAGACCAGCGTGTGGAACGGGAGGGATTGTTTaGTCCTTAGCGGCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: GWPSVHPQLPGCGRPACGTGGIV*SLAALS
Trigger: GGACAGAGCCGCTAAGGACAAAACAATCCCTCCCGT...TCCACACGCTGGTCTACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS GCA 90 bp GAGGCTCAGGCAAGAAGATGTTCTGCCCTGTCCTACTCAAGCTGCTaGCCACATCTGAAGGGATACAGTGAGGTGCCTCACTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: EAQARRCSALSYSSC*PHLKGYSEVPHCSR
Trigger: CCTGCTGCAGTGAGGCACCTCACTGTATCCCTTCAGATGTGGGCAGCAGCTTGAGTAGGACAGGGCAGAACATCTTCTTGCCTGAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562621.1
ENST00000569693.5
CDS GCA 90 bp GCAGAGGCTCAGGCAAGAAGATGTTCTGCCCTGTCCTACTCAAGCTaGTGCCCACATCTGAAGGGATACAGTGAGGTGCCTCACTGCAGC +
Preference number: 5 (lower is better)
Translates to: AEAQARRCSALSYSS*CPHLKGYSEVPHCS
Trigger: GCTGCAGTGAGGCACCTCACTGTATCCCTTCAGATGTGGGCAGCAGCTTGAGTAGGACAGGGCAGAACATCTTCTTGCCTGAGCCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562621.1
ENST00000569693.5
CDS GCA 90 bp TCAGATCCTGAGAGGCGGTTCCTCCTGGTAATGGCCTTCTTTGCATaGTCACGGGAGCTACAAGCAATGTGGGTCCCCACCACCTCTGTG +
Preference number: 5 (lower is better)
Translates to: SDPERRFLLVMAFFA*SRELQAMWVPTTSV
Trigger: CACAGAGGTGGTGGGGACCCACATTGCTTGTAGCTCCCGTGAGCATGCAAAGAAGGCCATTACCAGGAGGAACCGCCTCTCAGGATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS CCA 90 bp CTGGTAATGGCCTTCTTTGCATGCTCACGGGAGCTACAAGCAATGTaGGTCCCCACCACCTCTGTGGACAAGGGACACTCTTCCCACCAG +
Preference number: 5 (lower is better)
Translates to: LVMAFFACSRELQAM*VPTTSVDKGHSSHQ
Trigger: CTGGTGGGAAGAGTGTCCCTTGTCCACAGAGGTGGTGGGGACCCACATTGCTTGTAGCTCCCGTGAGCATGCAAAGAAGGCCATTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS-3UTR CAA 90 bp GGAAAGAGCAGCGGTGACGAACCGGGTTCCACTCAGACGTCCGACACTTCTCGCGAAGCTCATGTAGCTTaGGACCAACTGGACCGCAAA +
Preference number: 5 (lower is better)
Translates to: GKSSGDEPGSTQTSDTSREAHVA*DQLDRK
Trigger: TTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTC...GCGAGAAGTGTCGGACGTCTGAGTGGAACCCGGTTCGTCACCGCTGCTCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562286.1
ENST00000567941.5
ENST00000569517.5
CDS TCA 90 bp CAAGAAGATGTTCTGCCCTGTCCTACTCAAGCTGCTGCCCACATCTaGAGGGATACAGTGAGGTGCCTCACTGCAGCAGGAGGCAAGCTC +
Preference number: 5 (lower is better)
Translates to: QEDVLPCPTQAAAHI*RDTVRCLTAAGGKL
Trigger: GAGCTTGCCTCCTGCTGCAGTGAGGCACCTCACTGTATCCCTTCAGATGTGGGCAGCAGCTTGAGTAGGACAGGGCAGAACATCTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562621.1
ENST00000569693.5
CDS CCA 90 bp TGCCCTCAGCCAGTAAGTCAGCAAAACCTCTGCGTAGTGACTCACTaGATTCCCAGCCCAAGCCTGACAATGGGCTTCTCTGGGGAGATC +
Preference number: 5 (lower is better)
Translates to: CPQPVSQQNLCVVTH*IPSPSLTMGFSGEI
Trigger: GATCTCCCCAGAGAAGCCCATTGTCAGGCTTGGGCTGGGAATCCAGTGAGTCACTACGCAGAGGTTTTGCTGACTTACTGGCTGAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS CCA 90 bp GAACAGAACACCAGGGACAGTTGCCAGGCCTGGCGGAGCCTGATGTaGCTTCTGGTCACATACAGAGTCACAGGGCCCTTAATTCCTTCT +
Preference number: 5 (lower is better)
Translates to: EQNTRDSCQAWRSLM*LLVTYRVTGPLIPS
Trigger: AGAAGGAATTAAGGGCCCTGTGACTCTGTATGTGACCAGAAGCCACATCAGGCTCCGCCAGGCCTGGCAACTGTCCCTGGTGTTCTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565814.1
CDS-3UTR CAA 90 bp CAGGATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCCGAGGCTCTGGAAGTCATGAACTCTaGGGGTGCCCTCAGAGACAC +
Preference number: 5 (lower is better)
Translates to: QDVVDQRVEMDPGEIRGSGSHEL*GCPQRH
Trigger: GTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCC...AGAGCCTCGGATCTCACCAGGATCCATTTCCACACGCTGGTCTACCACATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CAA 90 bp GAAGTCATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTCTAGAGACCAGGATGTaGGGTGAGTGGGCGTGCACT +
Preference number: 5 (lower is better)
Translates to: EVMNSWGALRDTRLVSMVLETRM*GEWACT
Trigger: AGTGCACGCCCACTCACCCAACATCCTGGTCTCTAG...AACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CAA 90 bp ACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGACGGGAGGGATTGTTTaGTCCTTAGCGGCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: TRMLGEWACTSQVGKEELTGGIV*SLAALS
Trigger: GGACAGAGCCGCTAAGGACAAAACAATCCCTCCCGT...CAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CAA 90 bp CAGGATGTGGTAGACCAGCGTGTGGAAATGGATCCTGGTGAGATCCGAGGCTCTACGGGAGGGATTGTTTaGTCCTTAGCGGCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: QDVVDQRVEMDPGEIRGSTGGIV*SLAALS
Trigger: GGACAGAGCCGCTAAGGACAAAACAATCCCTCCCGT...AGAGCCTCGGATCTCACCAGGATCCATTTCCACACGCTGGTCTACCACATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CAA 90 bp CCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGCGAAGCTCATGTAGCTTaGGACCAACTGGACCGCAAA +
Preference number: 5 (lower is better)
Translates to: PGCWVSGRALLKWARKNCEAHVA*DQLDRK
Trigger: TTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTC...GCAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
CDS-3UTR CAA 90 bp GCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCGAAGCTCATGTAGCTTaGGACCAACTGGACCGCAAA +
Preference number: 5 (lower is better)
Translates to: AFLETRMLGEWACTSQVGEAHVA*DQLDRK
Trigger: TTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTC...GCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
CDS-3UTR CAA 90 bp CCACGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTCTACTACTGGCTTGTTaGGGTTTAATACAATCCTGG +
Preference number: 5 (lower is better)
Translates to: PRLPAGWPSVHPQLPGCGLLLAC*GLIQSW
Trigger: CCAGGATTGTATTAAACCCAAACAAGCCAGTAGTAG...ACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CAA 90 bp CCTATAACCTATGGAGCCAGGACAGGAAAGCATGATCCTTCAGCTCATGACGCCCTAGAGACCAGGATGTaGGGTGAGTGGGCGTGCACT +
Preference number: 5 (lower is better)
Translates to: PITYGARTGKHDPSAHDALETRM*GEWACT
Trigger: AGTGCACGCCCACTCACCCAACATCCTGGTCTCTAG...GGCGTCATGAGCTGAAGGATCATGCTTTCCTGTCCTGGCTCCATAGGTTATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS TCA 90 bp AGAACCTGGGCTCCTGGGAACTCTGATGCAACCTGGGCAATGTCGTaGAAAGTTTCCTTATCACTGAAGAAGCGCTCAGCAGCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: RTWAPGNSDATWAMS*KVSLSLKKRSAAAP
Trigger: GGGAGCAGCTGCTGAGCGCTTCTTCAGTGATAAGGAAACTTTTCACGACATTGCCCAGGTTGCATCAGAGTTCCCAGGAGCCCAGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567733.1
CDS GCA 90 bp ACTACAAACCCTGCAGCTTGCAGCCATGGTCGGTTTAGCACAGGATaGAGAGGCTCAGGCAAGAAGATGTTCTGCCCTGTCCTACTCAAG +
Preference number: 5 (lower is better)
Translates to: TTNPAACSHGRFSTG*RGSGKKMFCPVLLK
Trigger: CTTGAGTAGGACAGGGCAGAACATCTTCTTGCCTGAGCCTCTGCATCCTGTGCTAAACCGACCATGGCTGCAAGCTGCAGGGTTTGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS CCA 90 bp GGCTCCAAGCAGGCTGGTTTCTGGCTGAGGAGACCCCAGCAACAATaGCCTAAGGTCAGCATGGCACTGCAAGAAACAAACCAAAAACCT +
Preference number: 5 (lower is better)
Translates to: GSKQAGFWLRRPQQQ*PKVSMALQETNQKP
Trigger: AGGTTTTTGGTTTGTTTCTTGCAGTGCCATGCTGACCTTAGGCCATTGTTGCTGGGGTCTCCTCAGCCAGAAACCAGCCTGCTTGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS-3UTR CAA 90 bp CCTATAACCTATGGAGCCAGGACAGGAAAGCATGATCCTTCAGCTCATGACGCCACATCAACACATGCATaGACTCCCACTGCCACGCGG +
Preference number: 5 (lower is better)
Translates to: PITYGARTGKHDPSAHDATSTHA*TPTATR
Trigger: CCGCGTGGCAGTGGGAGTCAATGCATGTGTTGATGT...GGCGTCATGAGCTGAAGGATCATGCTTTCCTGTCCTGGCTCCATAGGTTATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311669.12
CDS-3UTR CAA 90 bp CCACGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGTACCTTTAAATCTGAGTaGGCTGCAAATTTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: PRLPAGWPSVHPQLPGCGTFKSE*AANFCP
Trigger: TGGACAGAAATTTGCAGCCAACTCAGATTTAAAGGT...ACCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563907.5
ENST00000567941.5
CDS-3UTR CAA 90 bp AATACAATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCAGTGTCCATCCACAGTaGCCAGGATGTGGTAGACCA +
Preference number: 5 (lower is better)
Translates to: NTILEPASEWEVMNSWGASVHPQ*PGCGRP
Trigger: TGGTCTACCACATCCTGGCAACTGTGGATGGACACT...GGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CAA 90 bp ACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGAGTGAGGAGTGTCCATCCACAGTaGCCAGGATGTGGTAGACCA +
Preference number: 5 (lower is better)
Translates to: TDHAHIRNTVPGRERRVRSVHPQ*PGCGRP
Trigger: TGGTCTACCACATCCTGGCAACTGTGGATGGACACT...CCTCACTCTTCTCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CAA 90 bp GCCACGGCTGCCAGCTGGTTGGCCCAGTGTCCATCCACAGTTGCCAGGATGTGGCATTCTACTACTGGCTaGTTTGGGTTTAATACAATC +
Preference number: 5 (lower is better)
Translates to: ATAASWLAQCPSTVARMWHSTTG*FGFNTI
Trigger: GATTGTATTAAACCCAAACAAGCCAGTAGTAGAATG...CCACATCCTGGCAACTGTGGATGGACACTGGGCCAACCAGCTGGCAGCCGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS TCA 90 bp CCCATTCCCAGGACTAAGGCCAAGTGCCTGCAAGAGCTTCACCCCTaGGAGCACCACATCAACACATGCATTGACTCTCAATTCCAACTG +
Preference number: 5 (lower is better)
Translates to: PIPRTKAKCLQELHP*EHHINTCIDSQFQL
Trigger: CAGTTGGAATTGAGAGTCAATGCATGTGTTGATGTGGTGCTCTCAGGGGTGAAGCTCTTGCAGGCACTTGGCCTTAGTCCTGGGAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565814.1
CDS TCA 90 bp CCCATTCCCAGGACTAAGGCCAAGTGCCTGCAAGAGCTTCACCCCTaGGAGCACCACATCAACACATGCATTGACTCTAGAAGGAGGAAA +
Preference number: 5 (lower is better)
Translates to: PIPRTKAKCLQELHP*EHHINTCIDSRRRK
Trigger: TTTCCTCCTTCTAGAGTCAATGCATGTGTTGATGTGGTGCTCTCAGGGGTGAAGCTCTTGCAGGCACTTGGCCTTAGTCCTGGGAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566509.5
CDS GCA 90 bp AACAGGCTCTTCTGCAAGGCAAGGATGAGAAGAACCGTGCAGAGCTaGTTGCTGTTTCCACAGGAAACAAGGCAGCAGATGCCAAGAGAG +
Preference number: 5 (lower is better)
Translates to: NRLFCKARMRRTVQS*LLFPQETRQQMPRE
Trigger: CTCTCTTGGCATCTGCTGCCTTGTTTCCTGTGGAAACAGCAAGCAGCTCTGCACGGTTCTTCTCATCCTTGCCTTGCAGAAGAGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS GCA 90 bp CTGAATTTCTTCCCAACAGCCAAGCTCACTGCATCTCCTCTTCCCTaGTGCCCATCAGTGGTTTCTGGGCACCTGATCCAAAGGATCAGA +
Preference number: 5 (lower is better)
Translates to: LNFFPTAKLTASPLP*CPSVVSGHLIQRIR
Trigger: TCTGATCCTTTGGATCAGGTGCCCAGAAACCACTGATGGGCAGCAGGGAAGAGGAGATGCAGTGAGCTTGGCTGTTGGGAAGAAATTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS GCA 90 bp TTGGAACTTAAGCAGGCTGAATTTCTTCCCAACAGCCAAGCTCACTaGATCTCCTCTTCCCTGCTGCCCATCAGTGGTTTCTGGGCACCT +
Preference number: 5 (lower is better)
Translates to: LELKQAEFLPNSQAH*ISSSLLPISGFWAP
Trigger: AGGTGCCCAGAAACCACTGATGGGCAGCAGGGAAGAGGAGATGCAGTGAGCTTGGCTGTTGGGAAGAAATTCAGCCTGCTTAAGTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS-3UTR CAA 90 bp GGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCAGAGACACCTACTACTGGCTTGTTaGGGTTTAATACAATCCTGG +
Preference number: 5 (lower is better)
Translates to: GACLRMGSHELLGCPQRHLLLAC*GLIQSW
Trigger: CCAGGATTGTATTAAACCCAAACAAGCCAGTAGTAG...GTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CAA 90 bp CTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTGGCGCACTACTACTGGCTTGTTaGGGTTTAATACAATCCTGG +
Preference number: 5 (lower is better)
Translates to: LLGCPQRHSAGVYGFCGALLLAC*GLIQSW
Trigger: CCAGGATTGTATTAAACCCAAACAAGCCAGTAGTAG...TGCGCCACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS TCA 90 bp TACTTGAGCTCTCAAACACAGGAGAGACAGTACAGAATGGCAGCATaGCTTCCAAATACCAGCATACAGTGTGCAGCACGCACGCCCTGC +
Preference number: 5 (lower is better)
Translates to: YLSSQTQERQYRMAA*LPNTSIQCAARTPC
Trigger: GCAGGGCGTGCGTGCTGCACACTGTATGCTGGTATTTGGAAGTCATGCTGCCATTCTGTACTGTCTCTCCTGTGTTTGAGAGCTCAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS GCA 90 bp AATTTCTTCCCAACAGCCAAGCTCACTGCATCTCCTCTTCCCTGCTaGCCATCAGTGGTTTCTGGGCACCTGATCCAAAGGATCAGACTA +
Preference number: 5 (lower is better)
Translates to: NFFPTAKLTASPLPC*PSVVSGHLIQRIRL
Trigger: TAGTCTGATCCTTTGGATCAGGTGCCCAGAAACCACTGATGGGCAGCAGGGAAGAGGAGATGCAGTGAGCTTGGCTGTTGGGAAGAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS CCA 90 bp GGAAGACTAGGCTGTGCAGAGCCATCAGGGATACAGAATCAGAGATaGCAGTTCACTTCGACTGCTGTACGAATCTGTAGGAGTTGCAGC +
Preference number: 5 (lower is better)
Translates to: GRLGCAEPSGIQNQR*QFTSTAVRICRSCS
Trigger: GCTGCAACTCCTACAGATTCGTACAGCAGTCGAAGTGAACTGCCATCTCTGATTCTGTATCCCTGATGGCTCTGCACAGCCTAGTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS-3UTR CAA 90 bp TTTAATACAATCCTGGAGCCTGCCTCCGAATGGGAAGTCATGAACTCTTGGGGTACATCAACACATGCATaGACTCCCACTGCCACGCGG +
Preference number: 5 (lower is better)
Translates to: FNTILEPASEWEVMNSWGTSTHA*TPTATR
Trigger: CCGCGTGGCAGTGGGAGTCAATGCATGTGTTGATGT...ACCCCAAGAGTTCATGACTTCCCATTCGGAGGCAGGCTCCAGGATTGTATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563907.5
CDS-3UTR CAA 90 bp GCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCCTTCCAGATCATTCCTaGAATGCAGAATGCTGTGAT +
Preference number: 5 (lower is better)
Translates to: AFLETRMLGEWACTSQVGLPDHS*NAECCD
Trigger: ATCACAGCATTCTGCATTCAAGGAATGATCTGGAAG...GCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311669.12
ENST00000567941.5
CDS-3UTR CAA 90 bp CAAGATCCAGAAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGAAGCTCATGTAGCTTaGGACCAACTGGACCGCAAA +
Preference number: 5 (lower is better)
Translates to: QDPEEDVTDHAHIRNTVPEAHVA*DQLDRK
Trigger: TTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTC...TGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCTGGATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
CDS-3UTR CAA 90 bp AAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAGAGAGAGAAGCTCATGTAGCTTaGGACCAACTGGACCGCAAA +
Preference number: 5 (lower is better)
Translates to: KRMSLTMPTSGTPFQEEREAHVA*DQLDRK
Trigger: TTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTC...TCTCTCTTCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569517.5
ENST00000569534.5
CDS-3UTR CAA 90 bp GCCTCCGAATGGGAAGTCATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGAATGTTTTTATGGAGTaGCCAACAGGCTGGAATGTA +
Preference number: 5 (lower is better)
Translates to: ASEWEVMNSWGALRDTRLNVFME*PTGWNV
Trigger: TACATTCCAGCCTGTTGGCAACTCCATAAAAACATT...CAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCCCATTCGGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CAA 90 bp CTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTGGCGCAAATGTTTTTATGGAGTaGCCAACAGGCTGGAATGTA +
Preference number: 5 (lower is better)
Translates to: LLGCPQRHSAGVYGFCGANVFME*PTGWNV
Trigger: TACATTCCAGCCTGTTGGCAACTCCATAAAAACATT...TGCGCCACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS CCA 90 bp ATGGACAAATCCCTTGGAATTTCCCTATTGAGGTCAGAGACAAGCTaGGAATGGATTTCTGTTGAGAGAGCTGAGCCCAGGGCTACTGCC +
Preference number: 5 (lower is better)
Translates to: MDKSLGISLLRSETS*EWISVERAEPRATA
Trigger: GGCAGTAGCCCTGGGCTCAGCTCTCTCAACAGAAATCCATTCCCAGCTTGTCTCTGACCTCAATAGGGAAATTCCAAGGGATTTGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS-3UTR CAA 90 bp ACCTCACATGAGGCTTTCCTAGAGACCAGGATGTTGGGTGAGTGGGCGTGCACTCTTCCAGATCATTCCTaGAATGCAGAATGCTGTGAT +
Preference number: 5 (lower is better)
Translates to: TSHEAFLETRMLGEWACTLPDHS*NAECCD
Trigger: ATCACAGCATTCTGCATTCAAGGAATGATCTGGAAG...AGTGCACGCCCACTCACCCAACATCCTGGTCTCTAGGAAAGCCTCATGTGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311669.12
ENST00000567941.5
CDS-3UTR CAA 90 bp GGGAGGGATTGTTTTGTCCTTAGCGGCTCTGTCCTAAATTTGAGAGCAGGAGACGAAGCTCATGTAGCTTaGGACCAACTGGACCGCAAA +
Preference number: 5 (lower is better)
Translates to: GRDCFVLSGSVLNLRAGDEAHVA*DQLDRK
Trigger: TTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTC...GTCTCCTGCTCTCAAATTTAGGACAGAGCCGCTAAGGACAAAACAATCCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
CDS-3UTR CAA 90 bp AGGTGGAACTCATCCACTTCCTGCAATGACTCTGGTGGAACAAAGACATTGTCAGGAAGTCATGAACTCTaGGGGTGCCCTCAGAGACAC +
Preference number: 5 (lower is better)
Translates to: RWNSSTSCNDSGGTKTLSGSHEL*GCPQRH
Trigger: GTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCC...TGACAATGTCTTTGTTCCACCAGAGTCATTGCAGGAAGTGGATGAGTTCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR CAA 90 bp TCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTGGCGCAGCATTCTACTACTGGCTaGTTTGGGTTTAATACAATC +
Preference number: 5 (lower is better)
Translates to: SWGALRDTRLVSMVSVAQHSTTG*FGFNTI
Trigger: GATTGTATTAAACCCAAACAAGCCAGTAGTAGAATG...CTGCGCCACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CAA 90 bp CCAGGATGTTGGGTGAGTGGGCGTGCACTTCTCAAGTGGGCAAGGAAGAACTGCAATGTTTTTATGGAGTaGCCAACAGGCTGGAATGTA +
Preference number: 5 (lower is better)
Translates to: PGCWVSGRALLKWARKNCNVFME*PTGWNV
Trigger: TACATTCCAGCCTGTTGGCAACTCCATAAAAACATT...GCAGTTCTTCCTTGCCCACTTGAGAAGTGCACGCCCACTCACCCAACATCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS CCA 90 bp AAATCCCTTGGAATTTCCCTATTGAGGTCAGAGACAAGCTGGGAATaGATTTCTGTTGAGAGAGCTGAGCCCAGGGCTACTGCCACTAGA +
Preference number: 5 (lower is better)
Translates to: KSLGISLLRSETSWE*ISVERAEPRATATR
Trigger: TCTAGTGGCAGTAGCCCTGGGCTCAGCTCTCTCAACAGAAATCCATTCCCAGCTTGTCTCTGACCTCAATAGGGAAATTCCAAGGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS-3UTR CAA 90 bp ATGAACTCTTGGGGTGCCCTCAGAGACACTCGGCTGGTGTCTATGGTTTCTGTGCTTCCAGATCATTCCTaGAATGCAGAATGCTGTGAT +
Preference number: 5 (lower is better)
Translates to: MNSWGALRDTRLVSMVSVLPDHS*NAECCD
Trigger: ATCACAGCATTCTGCATTCAAGGAATGATCTGGAAG...CACAGAAACCATAGACACCAGCCGAGTGTCTCTGAGGGCACCCCAAGAGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563907.5
ENST00000567941.5
CDS-3UTR CAA 90 bp CTTCCTGCAATGACTCTGGTGGAACAAAGACATTGTCATCAAGAAGCTCATGTACTAGAGACCAGGATGTaGGGTGAGTGGGCGTGCACT +
Preference number: 5 (lower is better)
Translates to: LPAMTLVEQRHCHQEAHVLETRM*GEWACT
Trigger: AGTGCACGCCCACTCACCCAACATCCTGGTCTCTAG...TACATGAGCTTCTTGATGACAATGTCTTTGTTCCACCAGAGTCATTGCAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS-3UTR CAA 90 bp CCCCTAAGAATCTTCCTAATAGTGAGGGTGTACTTCCGAATAGAAGAGTCCTTCACGGGAGGGATTGTTTaGTCCTTAGCGGCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: PLRIFLIVRVYFRIEESFTGGIV*SLAALS
Trigger: GGACAGAGCCGCTAAGGACAAAACAATCCCTCCCGT...GAAGGACTCTTCTATTCGGAAGTACACCCTCACTATTAGGAAGATTCTTAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CAA 90 bp AAGAGTCCTTCGGCTGAAATGGCATCTCCAAGGCCTACAGTTCGAATGGGGTCTACATCAACACATGCATaGACTCGGGATGAGAGAAAG +
Preference number: 5 (lower is better)
Translates to: KSPSAEMASPRPTVRMGSTSTHA*TRDERK
Trigger: CTTTCTCTCATCCCGAGTCAATGCATGTGTTGATGT...AGACCCCATTCGAACTGTAGGCCTTGGAGATGCCATTTCAGCCGAAGGACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS TCA 90 bp ATAGTATGGGTGCTATATGCCTTTTTCAAGGTAATTAGCTCCCCCTaGGTCCCAGGAGAGCCCTACTTGAGCTCTCAAACACAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: IVWVLYAFFKVISSP*VPGEPYLSSQTQER
Trigger: TCTCTCCTGTGTTTGAGAGCTCAAGTAGGGCTCTCCTGGGACTCAGGGGGAGCTAATTACCTTGAAAAAGGCATATAGCACCCATACTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS-3UTR CAA 90 bp GGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTTGTTTGGGTTTAATAGGAAGTCATGAACTCTaGGGGTGCCCTCAGAGACAC +
Preference number: 5 (lower is better)
Translates to: GRIFPLCAILLLACLGLIGSHEL*GCPQRH
Trigger: GTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCC...TATTAAACCCAAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CAA 90 bp GATCCAGAAGAGGATGTCACTGACCATGCCCACATCAGGAACACCGTTCCAGGAAATGTTTTTATGGAGTaGCCAACAGGCTGGAATGTA +
Preference number: 5 (lower is better)
Translates to: DPEEDVTDHAHIRNTVPGNVFME*PTGWNV
Trigger: TACATTCCAGCCTGTTGGCAACTCCATAAAAACATT...TCCTGGAACGGTGTTCCTGATGTGGGCATGGTCAGTGACATCCTCTTCTGGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS CCA 90 bp GCACATTCTTCCTCACAGCATTGCCCTGAGCATCTTTCATTCAGTTaGAACTTAAGCAGGCTGAATTTCTTCCCAACAGCCAAGCTCACT +
Preference number: 5 (lower is better)
Translates to: AHSSSQHCPEHLSFS*NLSRLNFFPTAKLT
Trigger: AGTGAGCTTGGCTGTTGGGAAGAAATTCAGCCTGCTTAAGTTCCAACTGAATGAAAGATGCTCAGGGCAATGCTGTGAGGAAGAATGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS-3UTR CAA 90 bp TTGCCCATGGGCACTGAGCTGAAAGAAAGAGGAACCTCACATGAGGCTTTCCTACTACTACTGGCTTGTTaGGGTTTAATACAATCCTGG +
Preference number: 5 (lower is better)
Translates to: LPMGTELKERGTSHEAFLLLLAC*GLIQSW
Trigger: CCAGGATTGTATTAAACCCAAACAAGCCAGTAGTAG...TAGGAAAGCCTCATGTGAGGTTCCTCTTTCTTTCAGCTCAGTGCCCATGGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS GCA 90 bp TCAGTGGTTTCTGGGCACCTGATCCAAAGGATCAGACTATCTAGCTaGTCCAGTTGCTTCTATGTGAGTTGCTTTAGAGGAATGACTGTT +
Preference number: 5 (lower is better)
Translates to: SVVSGHLIQRIRLSS*SSCFYVSCFRGMTV
Trigger: AACAGTCATTCCTCTAAAGCAACTCACATAGAAGCAACTGGAGCAGCTAGATAGTCTGATCCTTTGGATCAGGTGCCCAGAAACCACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS-3UTR CAA 90 bp TTATGGCAGAAAGCACATCCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTACCTTTAAATCTGAGTaGGCTGCAAATTTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: LWQKAHPKLGNEVQPGPRTFKSE*AANFCP
Trigger: TGGACAGAAATTTGCAGCCAACTCAGATTTAAAGGT...ACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGGATGTGCTTTCTGCCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311669.12
ENST00000567941.5
CDS-3UTR CAA 90 bp TCTGAAATGTTTTTATGGAGTTGCCAACAGGCTGGAATGTACCTGATACAGTTTGGAAGTCATGAACTCTaGGGGTGCCCTCAGAGACAC +
Preference number: 5 (lower is better)
Translates to: SEMFLWSCQQAGMYLIQFGSHEL*GCPQRH
Trigger: GTGTCTCTGAGGGCACCCCAAGAGTTCATGACTTCC...AAACTGTATCAGGTACATTCCAGCCTGTTGGCAACTCCATAAAAACATTTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CAA 90 bp TGGCAGAAAGCACATCCAAAGCTAGGCAATGAAGTTCAGCCTGGGCCACGTGAACATTCTACTACTGGCTaGTTTGGGTTTAATACAATC +
Preference number: 5 (lower is better)
Translates to: WQKAHPKLGNEVQPGPREHSTTG*FGFNTI
Trigger: GATTGTATTAAACCCAAACAAGCCAGTAGTAGAATG...TTCACGTGGCCCAGGCTGAACTTCATTGCCTAGCTTTGGATGTGCTTTCTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CAA 90 bp TTTACTCCTCCCATGTTCTTTCAAGATCCAGAAGAGGATGTCACTGACCATGCCACCTTTAAATCTGAGTaGGCTGCAAATTTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: FTPPMFFQDPEEDVTDHATFKSE*AANFCP
Trigger: TGGACAGAAATTTGCAGCCAACTCAGATTTAAAGGT...GGCATGGTCAGTGACATCCTCTTCTGGATCTTGAAAGAACATGGGAGGAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563907.5
ENST00000567941.5
CDS-3UTR CAA 90 bp TCATTAAATATTGTCATTGTAACACGGAATGGAAATCATGATCCTTGCCCATGGAGTGTCCATCCACAGTaGCCAGGATGTGGTAGACCA +
Preference number: 5 (lower is better)
Translates to: SLNIVIVTRNGNHDPCPWSVHPQ*PGCGRP
Trigger: TGGTCTACCACATCCTGGCAACTGTGGATGGACACT...CCATGGGCAAGGATCATGATTTCCATTCCGTGTTACAATGACAATATTTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS-3UTR CAA 90 bp GTGAAGTGGAAGGATATTCCCTCTCTGTGCCATTCTACTACTGGCTTGTTTGGGCATTCTACTACTGGCTaGTTTGGGTTTAATACAATC +
Preference number: 5 (lower is better)
Translates to: VKWKDIPSLCHSTTGLFGHSTTG*FGFNTI
Trigger: GATTGTATTAAACCCAAACAAGCCAGTAGTAGAATG...CCCAAACAAGCCAGTAGTAGAATGGCACAGAGAGGGAATATCCTTCCACTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563907.5
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS GCA 90 bp CAGTATAGGCTGTCATTGTTTAAAGCACATTCTTCCTCACAGCATTaGCCTGAGCATCTTTCATTCAGTTGGAACTTAAGCAGGCTGAAT +
Preference number: 5 (lower is better)
Translates to: QYRLSLFKAHSSSQH*PEHLSFSWNLSRLN
Trigger: ATTCAGCCTGCTTAAGTTCCAACTGAATGAAAGATGCTCAGGGCAATGCTGTGAGGAAGAATGTGCTTTAAACAATGACAGCCTATACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS-3UTR CAA 90 bp ACTTCCTGCAATGACTCTGGTGGAACAAAGACATTGTCATCAAGAAGCTCATGTACCTTTAAATCTGAGTaGGCTGCAAATTTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: TSCNDSGGTKTLSSRSSCTFKSE*AANFCP
Trigger: TGGACAGAAATTTGCAGCCAACTCAGATTTAAAGGT...ACATGAGCTTCTTGATGACAATGTCTTTGTTCCACCAGAGTCATTGCAGGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562286.1
ENST00000567941.5
CDS-3UTR CAA 90 bp AGACATTGTCATCAAGAAGCTCATGTAGCTTTGGACCAACTGGACCGCAAAGAACATTCTACTACTGGCTaGTTTGGGTTTAATACAATC +
Preference number: 5 (lower is better)
Translates to: RHCHQEAHVALDQLDRKEHSTTG*FGFNTI
Trigger: GATTGTATTAAACCCAAACAAGCCAGTAGTAGAATG...TTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567941.5
CDS TCA 90 bp TGCAAATCAACAAAGACTCTGTACGATGGGAAAAATACATTACATTaGCATTCTCCAGAGAGCAAGACGTGGACTCAACCCTTGAATAGT +
Preference number: 5 (lower is better)
Translates to: CKSTKTLYDGKNTLH*HSPESKTWTQPLNS
Trigger: ACTATTCAAGGGTTGAGTCCACGTCTTGCTCTCTGGAGAATGTCAATGTAATGTATTTTTCCCATCGTACAGAGTCTTTGTTGATTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS-3UTR CAA 90 bp AAAATTACCCCTAAGAATCTTCCTAATAGTGAGGGTGTACTTCCGAATAGAAGACTACTACTGGCTTGTTaGGGTTTAATACAATCCTGG +
Preference number: 5 (lower is better)
Translates to: KITPKNLPNSEGVLPNRRLLLAC*GLIQSW
Trigger: CCAGGATTGTATTAAACCCAAACAAGCCAGTAGTAG...TCTTCTATTCGGAAGTACACCCTCACTATTAGGAAGATTCTTAGGGGTAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567941.5
ENST00000569534.5
ENST00000569693.5
CDS GCA 72 bp GCGCCGGACTGGCCGCACGATAAGCGCGTCCCAGGCTaGCGCCAACCGGCCCTCGGGGGAGACGGGTCCCGG +
Preference number: 6 (lower is better)
Translates to: APDWPHDKRVPG*RQPALGGDGSR
Trigger: CCGGGACCCGTCTCCCCCGAGGGCCGGTTGGCGGCAGCCTGGGACGCGCTTATCGTGCGGCCAGTCCGGCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000311669.12
ENST00000456471.3
ENST00000562286.1
ENST00000562823.1
ENST00000563907.5
ENST00000567733.1
ENST00000567941.5
ENST00000569058.1
ENST00000569517.5
ENST00000569534.5
CDS CCA 72 bp GGAAGCCCGCGTACGCGGAGCCGCGCCACAGCGCCATaGGGACCCAGGCGCCGCACCTGCGCGAACCAACTC +
Preference number: 6 (lower is better)
Translates to: GSPRTRSRATAP*GPRRRTCANQL
Trigger: GAGTTGGTTCGCGCAGGTGCGGCGCCTGGGTCCCCATGGCGCTGTGGCGCGGCTCCGCGTACGCGGGCTTCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311669.12
ENST00000456471.3
ENST00000562823.1
ENST00000567941.5
ENST00000569058.1
ENST00000569534.5
CDS CAA 90 bp CCGACCTCCAAGGCCGACCTCGGAGGCTCAGAGACCCAGGCCCCGTaGGCACTCACCCCACTGCCACGCGGCGCCAGCGCCGGACTGGCC +
Preference number: 6 (lower is better)
Translates to: PTSKADLGGSETQAP*ALTPLPRGASAGLA
Trigger: GGCCAGTCCGGCGCTGGCGCCGCGTGGCAGTGGGGTGAGTGCCAACGGGGCCTGGGTCTCTGAGCCTCCGAGGTCGGCCTTGGAGGTCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS GCA 72 bp GCTCAGAGACCCAGGCCCCGTTGGCACTCACCCCACTaGCACGCGGCGCCAGCGCCGGACTGGCCGCACGAT +
Preference number: 6 (lower is better)
Translates to: AQRPRPRWHSPH*HAAPAPDWPHD
Trigger: ATCGTGCGGCCAGTCCGGCGCTGGCGCCGCGTGGCAGTGGGGTGAGTGCCAACGGGGCCTGGGTCTCTGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS CCA 72 bp CACTCACCCCACTGCCACGCGGCGCCAGCGCCGGACTaGCCGCACGATAAGCGCGTCCCAGGCTGCCGCCAA +
Preference number: 6 (lower is better)
Translates to: HSPHCHAAPAPD*PHDKRVPGCRQ
Trigger: TTGGCGGCAGCCTGGGACGCGCTTATCGTGCGGCCAGTCCGGCGCTGGCGCCGCGTGGCAGTGGGGTGAGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS CAA 72 bp AAGGCCGACCTCGGAGGCTCAGAGACCCAGGCCCCGTaGGCACTCACCCCACTGCCACGCGGCGCCAGCGCC +
Preference number: 6 (lower is better)
Translates to: KADLGGSETQAP*ALTPLPRGASA
Trigger: GGCGCTGGCGCCGCGTGGCAGTGGGGTGAGTGCCAACGGGGCCTGGGTCTCTGAGCCTCCGAGGTCGGCCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562286.1
ENST00000562823.1
ENST00000567941.5
ENST00000569517.5
CDS CCA 72 bp GAAGAACCCCACTGCCACGCGGCGCCAGCGCCGGACTaGCCGCACGATAAGCGCGTCCCAGGCTGCCGCCAA +
Preference number: 6 (lower is better)
Translates to: EEPHCHAAPAPD*PHDKRVPGCRQ
Trigger: TTGGCGGCAGCCTGGGACGCGCTTATCGTGCGGCCAGTCCGGCGCTGGCGCCGCGTGGCAGTGGGGTTCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569058.1
ENST00000569534.5
CDS CCA 72 bp ATTGACTCCCACTGCCACGCGGCGCCAGCGCCGGACTaGCCGCACGATAAGCGCGTCCCAGGCTGCCGCCAA +
Preference number: 6 (lower is better)
Translates to: IDSHCHAAPAPD*PHDKRVPGCRQ
Trigger: TTGGCGGCAGCCTGGGACGCGCTTATCGTGCGGCCAGTCCGGCGCTGGCGCCGCGTGGCAGTGGGAGTCAAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000456471.3
ENST00000563907.5
ENST00000567733.1
CDS GCA 72 bp GCCGCAGGAGGTGAAGAACAGAACACCAGGGACAGTTaGCAGGCCTGGCGGAGCCTGATGTGGCTTCTGGTC +
Preference number: 6 (lower is better)
Translates to: AAGGEEQNTRDS*QAWRSLMWLLV
Trigger: GACCAGAAGCCACATCAGGCTCCGCCAGGCCTGGCAACTGTCCCTGGTGTTCTGTTCTTCACCTCCTGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565814.1
CDS GCA 72 bp TGCCCACATCTGAAGGGATACAGTGAGGTGCCTCACTaGAGCAGGAGGCAAGCTCCACAGCCAGCTGCCAAG +
Preference number: 6 (lower is better)
Translates to: CPHLKGYSEVPH*SRRQAPQPAAK
Trigger: CTTGGCAGCTGGCTGTGGAGCTTGCCTCCTGCTGCAGTGAGGCACCTCACTGTATCCCTTCAGATGTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562621.1
ENST00000569693.5
CDS CCA 72 bp CCTCACAGGAGCCTTGGCTCCAAGCAGGCTGGTTTCTaGCTGAGGAGACCCCAGCAACAATGGCCTAAGGTC +
Preference number: 6 (lower is better)
Translates to: PHRSLGSKQAGF*LRRPQQQWPKV
Trigger: GACCTTAGGCCATTGTTGCTGGGGTCTCCTCAGCCAGAAACCAGCCTGCTTGGAGCCAAGGCTCCTGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS CCA 72 bp ACCAGGGACAGTTGCCAGGCCTGGCGGAGCCTGATGTaGCTTCTGGTCACATACAGAGTCACAGGGCCCTTA +
Preference number: 6 (lower is better)
Translates to: TRDSCQAWRSLM*LLVTYRVTGPL
Trigger: TAAGGGCCCTGTGACTCTGTATGTGACCAGAAGCCACATCAGGCTCCGCCAGGCCTGGCAACTGTCCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565814.1
CDS GCA 72 bp GAGAGGCGGTTCCTCCTGGTAATGGCCTTCTTTGCATaGTCACGGGAGCTACAAGCAATGTGGGTCCCCACC +
Preference number: 6 (lower is better)
Translates to: ERRFLLVMAFFA*SRELQAMWVPT
Trigger: GGTGGGGACCCACATTGCTTGTAGCTCCCGTGAGCATGCAAAGAAGGCCATTACCAGGAGGAACCGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS TCA 72 bp GTTCTGCCCTGTCCTACTCAAGCTGCTGCCCACATCTaGAGGGATACAGTGAGGTGCCTCACTGCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: VLPCPTQAAAHI*RDTVRCLTAAG
Trigger: TCCTGCTGCAGTGAGGCACCTCACTGTATCCCTTCAGATGTGGGCAGCAGCTTGAGTAGGACAGGGCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562621.1
ENST00000569693.5
CDS GCA 72 bp CCAACAGCCAAGCTCACTGCATCTCCTCTTCCCTGCTaGCCATCAGTGGTTTCTGGGCACCTGATCCAAAGG +
Preference number: 6 (lower is better)
Translates to: PTAKLTASPLPC*PSVVSGHLIQR
Trigger: CCTTTGGATCAGGTGCCCAGAAACCACTGATGGGCAGCAGGGAAGAGGAGATGCAGTGAGCTTGGCTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS CCA 72 bp GCCTTCTTTGCATGCTCACGGGAGCTACAAGCAATGTaGGTCCCCACCACCTCTGTGGACAAGGGACACTCT +
Preference number: 6 (lower is better)
Translates to: AFFACSRELQAM*VPTTSVDKGHS
Trigger: AGAGTGTCCCTTGTCCACAGAGGTGGTGGGGACCCACATTGCTTGTAGCTCCCGTGAGCATGCAAAGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS CCA 72 bp GGTGAAGAACAGAACACCAGGGACAGTTGCCAGGCCTaGCGGAGCCTGATGTGGCTTCTGGTCACATACAGA +
Preference number: 6 (lower is better)
Translates to: GEEQNTRDSCQA*RSLMWLLVTYR
Trigger: TCTGTATGTGACCAGAAGCCACATCAGGCTCCGCCAGGCCTGGCAACTGTCCCTGGTGTTCTGTTCTTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565814.1
CDS GCA 72 bp TCATCCTGCCCTCAGCCAGTAAGTCAGCAAAACCTCTaGGTAGTGACTCACTGGATTCCCAGCCCAAGCCTG +
Preference number: 6 (lower is better)
Translates to: SSCPQPVSQQNL*VVTHWIPSPSL
Trigger: CAGGCTTGGGCTGGGAATCCAGTGAGTCACTACGCAGAGGTTTTGCTGACTTACTGGCTGAGGGCAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS TCA 72 bp AGGACTAAGGCCAAGTGCCTGCAAGAGCTTCACCCCTaGGAGCACCACATCAACACATGCATTGACTCCCAC +
Preference number: 6 (lower is better)
Translates to: RTKAKCLQELHP*EHHINTCIDSH
Trigger: GTGGGAGTCAATGCATGTGTTGATGTGGTGCTCTCAGGGGTGAAGCTCTTGCAGGCACTTGGCCTTAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311669.12
ENST00000456471.3
ENST00000563907.5
ENST00000567733.1
CDS GCA 72 bp GCAAGAAGATGTTCTGCCCTGTCCTACTCAAGCTGCTaGCCACATCTGAAGGGATACAGTGAGGTGCCTCAC +
Preference number: 6 (lower is better)
Translates to: ARRCSALSYSSC*PHLKGYSEVPH
Trigger: GTGAGGCACCTCACTGTATCCCTTCAGATGTGGGCAGCAGCTTGAGTAGGACAGGGCAGAACATCTTCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562621.1
ENST00000569693.5
CDS GCA 72 bp CAGGCAAGAAGATGTTCTGCCCTGTCCTACTCAAGCTaGTGCCCACATCTGAAGGGATACAGTGAGGTGCCT +
Preference number: 6 (lower is better)
Translates to: QARRCSALSYSS*CPHLKGYSEVP
Trigger: AGGCACCTCACTGTATCCCTTCAGATGTGGGCAGCAGCTTGAGTAGGACAGGGCAGAACATCTTCTTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562621.1
ENST00000569693.5
CDS CAA 72 bp TGCAAGGCAAGGATGAGAAGAACCGTGCAGAGCTGCTaGCTGTTTCCACAGGAAACAAGGCAGCAGATGCCA +
Preference number: 6 (lower is better)
Translates to: CKARMRRTVQSC*LFPQETRQQMP
Trigger: TGGCATCTGCTGCCTTGTTTCCTGTGGAAACAGCAAGCAGCTCTGCACGGTTCTTCTCATCCTTGCCTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS CAA 90 bp ACTCTGGTGGAACAAAGACATTGTCATCAAGAAGCTCATGTAGCTTaGGACCAACTGGACCGCAAAGAAGAACCCCACTGCCACGCGGCG +
Preference number: 6 (lower is better)
Translates to: TLVEQRHCHQEAHVA*DQLDRKEEPHCHAA
Trigger: CGCCGCGTGGCAGTGGGGTTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATGTCTTTGTTCCACCAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569058.1
ENST00000569534.5
CDS TCA 72 bp AGGACTAAGGCCAAGTGCCTGCAAGAGCTTCACCCCTaGGAGCACCACATCAACACATGCATTGACTCTCAA +
Preference number: 6 (lower is better)
Translates to: RTKAKCLQELHP*EHHINTCIDSQ
Trigger: TTGAGAGTCAATGCATGTGTTGATGTGGTGCTCTCAGGGGTGAAGCTCTTGCAGGCACTTGGCCTTAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565814.1
CDS TCA 72 bp AGGACTAAGGCCAAGTGCCTGCAAGAGCTTCACCCCTaGGAGCACCACATCAACACATGCATTGACTCTAGA +
Preference number: 6 (lower is better)
Translates to: RTKAKCLQELHP*EHHINTCIDSR
Trigger: TCTAGAGTCAATGCATGTGTTGATGTGGTGCTCTCAGGGGTGAAGCTCTTGCAGGCACTTGGCCTTAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566509.5
CDS GCA 72 bp TTCTGCAAGGCAAGGATGAGAAGAACCGTGCAGAGCTaGTTGCTGTTTCCACAGGAAACAAGGCAGCAGATG +
Preference number: 6 (lower is better)
Translates to: FCKARMRRTVQS*LLFPQETRQQM
Trigger: CATCTGCTGCCTTGTTTCCTGTGGAAACAGCAAGCAGCTCTGCACGGTTCTTCTCATCCTTGCCTTGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS CCA 72 bp GGCTGTGCAGAGCCATCAGGGATACAGAATCAGAGATaGCAGTTCACTTCGACTGCTGTACGAATCTGTAGG +
Preference number: 6 (lower is better)
Translates to: GCAEPSGIQNQR*QFTSTAVRICR
Trigger: CCTACAGATTCGTACAGCAGTCGAAGTGAACTGCCATCTCTGATTCTGTATCCCTGATGGCTCTGCACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS CAA 72 bp GCAGCACGCACGCCCTGCAGACAGTATAGGCTGTCATaGTTTAAAGCACATTCTTCCTCACAGCATTGCCCT +
Preference number: 6 (lower is better)
Translates to: AARTPCRQYRLS*FKAHSSSQHCP
Trigger: AGGGCAATGCTGTGAGGAAGAATGTGCTTTAAACAATGACAGCCTATACTGTCTGCAGGGCGTGCGTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS TCA 72 bp CACCGCGGGAAAGACCTGCTGCTTGATACTCTAAAATaGGGTGGAACTCATCCACTTCCTGCAATGACTCTG +
Preference number: 6 (lower is better)
Translates to: HRGKDLLLDTLK*GGTHPLPAMTL
Trigger: CAGAGTCATTGCAGGAAGTGGATGAGTTCCACCTCATTTTAGAGTATCAAGCAGCAGGTCTTTCCCGCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563907.5
CDS GCA 72 bp ATAACACAAAGGACACAAACTACAAACCCTGCAGCTTaGAGCCATGGTCGGTTTAGCACAGGATGCAGAGGC +
Preference number: 6 (lower is better)
Translates to: ITQRTQTTNPAA*SHGRFSTGCRG
Trigger: GCCTCTGCATCCTGTGCTAAACCGACCATGGCTGCAAGCTGCAGGGTTTGTAGTTTGTGTCCTTTGTGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS CAA 90 bp ATACAGTGTGCAGCACGCACGCCCTGCAGACAGTATAGGCTGTCATaGTTTAAAGCACATTCTTCCTCACAGCATTGCCCTGAGCATCTT +
Preference number: 6 (lower is better)
Translates to: IQCAARTPCRQYRLS*FKAHSSSQHCPEHL
Trigger: AAGATGCTCAGGGCAATGCTGTGAGGAAGAATGTGCTTTAAACAATGACAGCCTATACTGTCTGCAGGGCGTGCGTGCTGCACACTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS CAA 90 bp ACTCTGGTGGAACAAAGACATTGTCATCAAGAAGCTCATGTAGCTTaGGACCAACTGGACCGCAAAGAAGAACCTGGGCTCCTGGGAACT +
Preference number: 6 (lower is better)
Translates to: TLVEQRHCHQEAHVA*DQLDRKEEPGLLGT
Trigger: AGTTCCCAGGAGCCCAGGTTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATGTCTTTGTTCCACCAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567733.1
CDS TCA 72 bp GTGCTATATGCCTTTTTCAAGGTAATTAGCTCCCCCTaGGTCCCAGGAGAGCCCTACTTGAGCTCTCAAACA +
Preference number: 6 (lower is better)
Translates to: VLYAFFKVISSP*VPGEPYLSSQT
Trigger: TGTTTGAGAGCTCAAGTAGGGCTCTCCTGGGACTCAGGGGGAGCTAATTACCTTGAAAAAGGCATATAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS GCA 72 bp CCAAATACCAGCATACAGTGTGCAGCACGCACGCCCTaGAGACAGTATAGGCTGTCATTGTTTAAAGCACAT +
Preference number: 6 (lower is better)
Translates to: PNTSIQCAARTP*RQYRLSLFKAH
Trigger: ATGTGCTTTAAACAATGACAGCCTATACTGTCTGCAGGGCGTGCGTGCTGCACACTGTATGCTGGTATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS GCA 72 bp TCTGGGCACCTGATCCAAAGGATCAGACTATCTAGCTaGTCCAGTTGCTTCTATGTGAGTTGCTTTAGAGGA +
Preference number: 6 (lower is better)
Translates to: SGHLIQRIRLSS*SSCFYVSCFRG
Trigger: TCCTCTAAAGCAACTCACATAGAAGCAACTGGAGCAGCTAGATAGTCTGATCCTTTGGATCAGGTGCCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS CAA 72 bp GAACAAAGACATTGTCATCAAGAAGCTCATGTAGCTTaGGACCAACTGGACCGCAAAGAAGAACCCCACTGC +
Preference number: 6 (lower is better)
Translates to: EQRHCHQEAHVA*DQLDRKEEPHC
Trigger: GCAGTGGGGTTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATGTCTTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569058.1
ENST00000569534.5
CDS CAA 72 bp GAACAAAGACATTGTCATCAAGAAGCTCATGTAGCTTaGGACCAACTGGACCGCAAAGAAGAACCTGGGCTC +
Preference number: 6 (lower is better)
Translates to: EQRHCHQEAHVA*DQLDRKEEPGL
Trigger: GAGCCCAGGTTCTTCTTTGCGGTCCAGTTGGTCCAAAGCTACATGAGCTTCTTGATGACAATGTCTTTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567733.1
CDS GCA 72 bp CATTCCTGTAAGCAATCTCTTCTCAATGTATCATCCTaGCCTCAGCCAGTAAGTCAGCAAAACCTCTGCGTA +
Preference number: 6 (lower is better)
Translates to: HSCKQSLLNVSS*PQPVSQQNLCV
Trigger: TACGCAGAGGTTTTGCTGACTTACTGGCTGAGGGCAGGATGATACATTGAGAAGAGATTGCTTACAGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562621.1
CDS TCA 72 bp ACTTACTCATTTCCTTACCTGCTTGATACTCTAAAATaGGGTGGAACTCATCCACTTCCTGCAATGACTCTG +
Preference number: 6 (lower is better)
Translates to: TYSFPYLLDTLK*GGTHPLPAMTL
Trigger: CAGAGTCATTGCAGGAAGTGGATGAGTTCCACCTCATTTTAGAGTATCAAGCAGGTAAGGAAATGAGTAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566509.5
ENST00000569058.1
CDS GCA 72 bp ATACCAGTGGGGATGTCAGAAATGGAGGTTACAACCTaGAAAGAGAAGAAGATAAGCACTGCCATTAGAAAT +
Preference number: 6 (lower is better)
Translates to: IPVGMSEMEVTT*KEKKISTAIRN
Trigger: ATTTCTAATGGCAGTGCTTATCTTCTTCTCTTTGCAGGTTGTAACCTCCATTTCTGACATCCCCACTGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562621.1