RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADORA2A (Homo sapiens)

Ensembl gene IDs: ENSG00000128271

Ensembl transcript IDs: ENST00000337539.12, ENST00000436735.1, ENST00000444262.6, ENST00000464977.5, ENST00000467385.5, ENST00000472248.5, ENST00000486108.1, ENST00000486351.1, ENST00000496497.1, ENST00000610595.4, ENST00000611543.4, ENST00000618076.3

Found 483 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTaGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAG +
Preference number: 1 (lower is better)
Translates to: VTAGEDCLRLPGQRL*CQVSSRTDGRPSSQ
Trigger: CTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR GCA 90 bp ACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGGTaGCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGA +
Preference number: 1 (lower is better)
Translates to: TAGEDCLRLPGQRLW*QVSSRTDGRPSSQR
Trigger: TCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR GCA 90 bp ACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGAGGGCTGGGCCCTaGCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCA +
Preference number: 1 (lower is better)
Translates to: TRWCFQMLLQWRAGP*PAKMLLVLWPPPGA
Trigger: TGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGCCCAGCCCTCCACTGCAGAAGCATCTGGAAGCACCACCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR GCA 90 bp CAGGCCAGTCTGCTGTGCCCAAGCTGCTCTGTGGAGACAAGGTGGTaGTTCCAGATGCTTCTGCAGTGGAGGGCTGGGCCCTGCCCAGCA +
Preference number: 1 (lower is better)
Translates to: QASLLCPSCSVETRW*FQMLLQWRAGPCPA
Trigger: TGCTGGGCAGGGCCCAGCCCTCCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCACAGCAGACTGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR CCA 90 bp TGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGAGGGCTaGGCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACC +
Preference number: 1 (lower is better)
Translates to: CGDKVVLPDASAVEG*ALPSKDAAGAVAPT
Trigger: GGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGCCCAGCCCTCCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR CCA 90 bp AGCACATGCCAGTGGCCTGCCAGCCCCAACCTCTCCCCTGGGACCTaGGCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTG +
Preference number: 1 (lower is better)
Translates to: STCQWPASPNLSPGT*AHALALLCYNSLSL
Trigger: CAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGAGAGGTTGGGGCTGGCAGGCCACTGGCATGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR GCA 90 bp GCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTaGAGTGGAGGGCTGGGCCCTGCCCAGCAAAGATGCTGCTGGTGC +
Preference number: 1 (lower is better)
Translates to: AQAALWRQGGASRCF*SGGLGPAQQRCCWC
Trigger: GCACCAGCAGCATCTTTGCTGGGCAGGGCCCAGCCCTCCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR CCA 90 bp CAGTGGAGGGCTGGGCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTaGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTT +
Preference number: 1 (lower is better)
Translates to: QWRAGPCPAKMLLVL*PPPGARPHSMKHLL
Trigger: AAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGCCCAGCCCTCCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR CCA 90 bp TGGGCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTaGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTCAGAACCC +
Preference number: 1 (lower is better)
Translates to: WALPSKDAAGAVAPT*CKASQHETSASSEP
Trigger: GGGTTCTGAGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR CCA 90 bp AGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTaGAGGGCTGGGCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGG +
Preference number: 1 (lower is better)
Translates to: SCSVETRWCFQMLLQ*RAGPCPAKMLLVLW
Trigger: CCACAGCACCAGCAGCATCTTTGCTGGGCAGGGCCCAGCCCTCCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR GCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTaGAAGGCCTCACAGCATGAAACATCTGCTTCCTCAGAACCCAAG +
Preference number: 1 (lower is better)
Translates to: ALPSKDAAGAVAPTW*KASQHETSASSEPK
Trigger: CTTGGGTTCTGAGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR GCA 90 bp CCTCACAGCATGAAACATCTGCTTCCTCAGAACCCAAGCCCTTCTTaGTGGGCCTCATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGT +
Preference number: 1 (lower is better)
Translates to: PHSMKHLLPQNPSPS*WASCCSSLGLPSLS
Trigger: ACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCATGAGGCCCAGCAAGAAGGGCTTGGGTTCTGAGGAAGCAGATGTTTCATGCTGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp GGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGAGGGCCAGGCCAGTCTaGTGTGCCCAAGCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: GSCDSRRGLPEAPRAEALRARPV*CAQAAL
Trigger: CAGAGCAGCTTGGGCACAGCAGACTGGCCTGGCCCT...CAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTCTTGCTGGGCCTCATaGTGCTCCAGCCTGGGGCTC +
Preference number: 2 (lower is better)
Translates to: GSGARLAAGPTADPAARESCWAS*CSSLGL
Trigger: GAGCCCCAGGCTGGAGCAGCATGAGGCCCAGCAAGA...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCCCAGCAAAGATGCTaGTGGTGCTGTGGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAEAQQRC*WCCGPH
Trigger: GTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGC...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGTGGAGGGCTGGGCCCTaGCCAGCAAAGATGCTGCTG +
Preference number: 2 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRWRAGP*PAKMLL
Trigger: CAGCAGCATCTTTGCTGGGCAGGGCCCAGCCCTCCA...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR CCA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGCAGATGCTTCTGCAGTaGAGGGCTGGGCCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: GSGARLAAGPTADPAAREQMLLQ*RAGPCP
Trigger: TGGGCAGGGCCCAGCCCTCCACTGCAGAAGCATCTG...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCAAAGATGCTGCTGGTaGTGTGGCCCCCACCTGGTG +
Preference number: 2 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRQRCCW*CGPHLV
Trigger: CACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTG...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCAGGCCAGTCTGCTGTaGCCAAGCTGCTCTGTGGAG +
Preference number: 2 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRQASLL*PSCSVE
Trigger: CTCCACAGAGCAGCTTGGGCACAGCAGACTGGCCTG...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR CCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCCCTCAGGGTCTCCTaGCACTCTCTCTCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAEALRVS*HSLSSP
Trigger: GGGAGAAGAGAGAGAGTGCCAGGAGACCCTGAGGGC...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR CCA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGCAGCAAAGATGCTGCTaGTGCTGTGGCCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: GSGARLAAGPTADPAAREQQRCC*CCGPHL
Trigger: CAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTG...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR CCA 90 bp TCCCCTGGGACCTGGGCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCCCCGGGCAGAGGCTCTaGTGCCAGGTTAGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: SPGTWAHALALLCYNSLSPGQRL*CQVSSR
Trigger: CCTGCTGCTAACCTGGCACCAGAGCCTCTGCCCGGG...GGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGTGGCCCCCACCTGGTaGAAGGCCTCACAGCATGAA +
Preference number: 2 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRAVAPTW*KASQHE
Trigger: TTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCAC...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAAAGATGCTGCTGGTaGTGTGGCCCCCACCTGGTG +
Preference number: 2 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGQRCCW*CGPHLV
Trigger: CACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTG...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGGTGGTGCTTCCAGATaGTTCTGCAGTGGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAEGGASR*FCSGGL
Trigger: CAGCCCTCCACTGCAGAAGCATCTGGAAGCACCACC...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR CCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCACAGCAAAGATGCTGCTaGTGCTGTGGCCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRAQQRCC*CCGPHL
Trigger: CAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTG...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR CCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCCGGGCAGAGGCTCTaGTGCCAGGTTAGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: DKASHWVALRYSAHASGLPGQRL*CQVSSR
Trigger: CCTGCTGCTAACCTGGCACCAGAGCCTCTGCCCGGG...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR CCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCTCTCCCCTGGGACCTaGGCCCATGCTCTGGCACTG +
Preference number: 2 (lower is better)
Translates to: DKASHWVALRYSAHASGLLSPGT*AHALAL
Trigger: CAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGAGAG...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCAGCCCAGCAAAGATGCTaGTGGTGCTGTGGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: KASHWVALRYSAHASGLPAQQRC*WCCGPH
Trigger: GTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGC...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGGCCCAGCAAAGATGCTaGTGGTGCTGTGGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: DKASHWVALRYSAHASGLAQQRC*WCCGPH
Trigger: GTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGC...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGTGGAGGGCTGGGCCCTaGCCAGCAAAGATGCTGCTG +
Preference number: 2 (lower is better)
Translates to: DKASHWVALRYSAHASGLWRAGP*PAKMLL
Trigger: CAGCAGCATCTTTGCTGGGCAGGGCCCAGCCCTCCA...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCTGCTGTGCCCAAGCTaGTCTGTGGAGACAAGGTGG +
Preference number: 2 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGLLCPS*SVETRW
Trigger: CCACCTTGTCTCCACAGAGCAGCTTGGGCACAGCAG...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCAAGGGCCAGGCCAGTCTaGTGTGCCCAAGCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: KASHWVALRYSAHASGLPRARPV*CAQAAL
Trigger: CAGAGCAGCTTGGGCACAGCAGACTGGCCTGGCCCT...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCAGGGCAGAGGCTCTGGTaGCAGGTTAGCAGCAGGACC +
Preference number: 2 (lower is better)
Translates to: KASHWVALRYSAHASGLPGQRLW*QVSSRT
Trigger: GGTCCTGCTGCTAACCTGGCACCAGAGCCTCTGCCC...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR CCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCAGATGCTTCTGCAGTaGAGGGCTGGGCCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: DKASHWVALRYSAHASGLQMLLQ*RAGPCP
Trigger: TGGGCAGGGCCCAGCCCTCCACTGCAGAAGCATCTG...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR TCA 90 bp TCCCCTGGGACCTGGGCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCAGATGGCCCTGGGACTaGGAAGTGGATGGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: SPGTWAHALALLCYNSLSRWPWD*EVDGSC
Trigger: ACAGCTGCCATCCACTTCTCAGTCCCAGGGCCATCT...GGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp TCCCCTGGGACCTGGGCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCAACCCAAGCCCTTCTTaGTGGGCCTCATGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: SPGTWAHALALLCYNSLSNPSPS*WASCCS
Trigger: GGAGCAGCATGAGGCCCAGCAAGAAGGGCTTGGGTT...GGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCAAAAGTAGGAACCGGCTaGCCTCAGGGTCTCCTGGCA +
Preference number: 2 (lower is better)
Translates to: KASHWVALRYSAHASGLPKVGTG*PQGLLA
Trigger: TGCCAGGAGACCCTGAGGGCAGCCGGTTCCTACTTT...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCAAACCCAAGCCCTTCTTaGTGGGCCTCATGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: KASHWVALRYSAHASGLPNPSPS*WASCCS
Trigger: GGAGCAGCATGAGGCCCAGCAAGAAGGGCTTGGGTT...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCAGGTGGTGCTTCCAGATaGTTCTGCAGTGGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: KASHWVALRYSAHASGLPGGASR*FCSGGL
Trigger: CAGCCCTCCACTGCAGAAGCATCTGGAAGCACCACC...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR CCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTTCTCCCAACGTGACTaGTCAAGCCAACCAGAAAGA +
Preference number: 2 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKAFSQRD*SSQPER
Trigger: TCTTTCTGGTTGGCTTGACCAGTCACGTTGGGAGAA...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR CAA 90 bp GCCTCACAGCATGAAACATCTGCTTCCTCAGAACCCAAGCCCTTCTaGCTGGGCCTCATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAG +
Preference number: 2 (lower is better)
Translates to: ASQHETSASSEPKPF*LGLMLLQPGAPFSQ
Trigger: CTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCATGAGGCCCAGCAAGAAGGGCTTGGGTTCTGAGGAAGCAGATGTTTCATGCTGTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTAAAGTAGGAACCGGCTaGCCTCAGGGTCTCCTGGCA +
Preference number: 2 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPKVGTG*PQGLLA
Trigger: TGCCAGGAGACCCTGAGGGCAGCCGGTTCCTACTTT...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGTCTTGCTGGGCCTCATaGTGCTCCAGCCTGGGGCTC +
Preference number: 2 (lower is better)
Translates to: AHALALLCYNSLSLIPALSCWAS*CSSLGL
Trigger: GAGCCCCAGGCTGGAGCAGCATGAGGCCCAGCAAGA...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGGGGCAGAGGCTCTGGTaGCAGGTTAGCAGCAGGACC +
Preference number: 2 (lower is better)
Translates to: AHALALLCYNSLSLIPALGQRLW*QVSSRT
Trigger: GGTCCTGCTGCTAACCTGGCACCAGAGCCTCTGCCC...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR TCA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATTCTCTTCTCCCAACGTaGCTGGTCAAGCCAACCAGA +
Preference number: 2 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHSLLPT*LVKPTR
Trigger: TCTGGTTGGCTTGACCAGTCACGTTGGGAGAAGAGA...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR TCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGACAACTCCCTGTCCTTaGTCCCAGCTTTGTCACTCC +
Preference number: 2 (lower is better)
Translates to: DKASHWVALRYSAHASGLTTPCP*SQLCHS
Trigger: GGAGTGACAAAGCTGGGATCAAGGACAGGGAGTTGT...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGAAAGTAGGAACCGGCTaGCCTCAGGGTCTCCTGGCA +
Preference number: 2 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWKVGTG*PQGLLA
Trigger: TGCCAGGAGACCCTGAGGGCAGCCGGTTCCTACTTT...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR TCA 90 bp AAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAATCTCTTCTCCCAACGTaGCTGGTCAAGCCAACCAGA +
Preference number: 2 (lower is better)
Translates to: KMLLVLWPPPGARPHSMKSLLPT*LVKPTR
Trigger: TCTGGTTGGCTTGACCAGTCACGTTGGGAGAAGAGA...TTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR TCA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTTCTCTTCTCCCAACGTaGCTGGTCAAGCCAACCAGA +
Preference number: 2 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPSLLPT*LVKPTR
Trigger: TCTGGTTGGCTTGACCAGTCACGTTGGGAGAAGAGA...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGAACCCAAGCCCTTCTTaGTGGGCCTCATGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: AHALALLCYNSLSLIPALNPSPS*WASCCS
Trigger: GGAGCAGCATGAGGCCCAGCAAGAAGGGCTTGGGTT...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR CCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATACAGATGCTTCTGCAGTaGAGGGCTGGGCCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIQMLLQ*RAGPCP
Trigger: TGGGCAGGGCCCAGCCCTCCACTGCAGAAGCATCTG...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR GCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATACAGGCCAGTCTGCTGTaGCCAAGCTGCTCTGTGGAG +
Preference number: 2 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIQASLL*PSCSVE
Trigger: CTCCACAGAGCAGCTTGGGCACAGCAGACTGGCCTG...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR CCA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCTTCTCCCAACGTGACTaGTCAAGCCAACCAGAAAGA +
Preference number: 2 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCFSQRD*SSQPER
Trigger: TCTTTCTGGTTGGCTTGACCAGTCACGTTGGGAGAA...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR CCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATAGCCCTCAGGGTCTCCTaGCACTCTCTCTCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIALRVS*HSLSSP
Trigger: GGGAGAAGAGAGAGAGTGCCAGGAGACCCTGAGGGC...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR TCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGTCTCTTCTCCCAACGTaGCTGGTCAAGCCAACCAGA +
Preference number: 2 (lower is better)
Translates to: AHALALLCYNSLSLIPALSLLPT*LVKPTR
Trigger: TCTGGTTGGCTTGACCAGTCACGTTGGGAGAAGAGA...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR CCA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGTTCTCCCAACGTGACTaGTCAAGCCAACCAGAAAGA +
Preference number: 2 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWFSQRD*SSQPER
Trigger: TCTTTCTGGTTGGCTTGACCAGTCACGTTGGGAGAA...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR CCA 72 bp GGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTaGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCC +
Preference number: 3 (lower is better)
Translates to: GEDCLRLPGQRL*CQVSSRTDGRP
Trigger: GGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR GCA 72 bp GGAGGGCTGGGCCCTGCCCAGCAAAGATGCTGCTGGTaGTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCA +
Preference number: 3 (lower is better)
Translates to: GGLGPAQQRCCW*CGPHLVQGLTA
Trigger: TGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGCCCAGCCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR GCA 72 bp GGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATaGCAGTGGCCTGCCAGCCCCAACCTCTCCCCTGGG +
Preference number: 3 (lower is better)
Translates to: GLSLGSSALLST*QWPASPNLSPG
Trigger: CCCAGGGGAGAGGTTGGGGCTGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR CCA 72 bp AGTGGAGGGCTGGGCCCTGCCCAGCAAAGATGCTGCTaGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACA +
Preference number: 3 (lower is better)
Translates to: SGGLGPAQQRCC*CCGPHLVQGLT
Trigger: TGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGCCCAGCCCTCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR GCA 72 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTaGCTGAGGCTCCCCGGGCAGAGGCTCTGGTGCCAG +
Preference number: 3 (lower is better)
Translates to: EKWMAAVTAGED*LRLPGQRLWCQ
Trigger: CTGGCACCAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR GCA 72 bp GCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTaGAGTGGAGGGCTGGGCCCTGCCCAGCAAAGATGC +
Preference number: 3 (lower is better)
Translates to: ALWRQGGASRCF*SGGLGPAQQRC
Trigger: GCATCTTTGCTGGGCAGGGCCCAGCCCTCCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR CCA 72 bp CCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTaGTGCAAGGCCTCACAGCATGAAACATCTGCTTCC +
Preference number: 3 (lower is better)
Translates to: PSKDAAGAVAPT*CKASQHETSAS
Trigger: GGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR-3UTR CAA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCATACAACTCCCTGTCCTaGATCCCAGCTTTGTCACTC +
Preference number: 3 (lower is better)
Translates to: KASHWVALRYSAHASGLPYNSLS*IPALSL
Trigger: GAGTGACAAAGCTGGGATCAAGGACAGGGAGTTGTA...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR TCA 72 bp TCCCAGCTTTGTCACTCCAAGAGATGGCCCTGGGACTaGGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGA +
Preference number: 3 (lower is better)
Translates to: SQLCHSKRWPWD*EVDGSCDSRRG
Trigger: TCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTCAGTCCCAGGGCCATCTCTTGGAGTGACAAAGCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR GCA 72 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTaGAAGGCCTCACAGCATGAAACATCTGCTTCCTCA +
Preference number: 3 (lower is better)
Translates to: SKDAAGAVAPTW*KASQHETSASS
Trigger: TGAGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTGCGCCCGAACCCGCTaGCTCCAGGTGCCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKACARTR*LQVPLP
Trigger: TGGCAGGGGCACCTGGAGGCAGCGGGTTCGGGCGCA...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610595.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGTGCGCCCGAACCCGCTaGCTCCAGGTGCCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAECARTR*LQVPLP
Trigger: TGGCAGGGGCACCTGGAGGCAGCGGGTTCGGGCGCA...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610595.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGCCCTCCCCGCAGCCCTaGGAGTGGTTCTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GSCDSRRGLPEAPRAEALPSPQP*EWFLPS
Trigger: GGAGGGCAAGAACCACTCCCAGGGCTGCGGGGAGGG...CAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCGGGGAGCACTGCCGTTaGCCCACACTCCTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKAGEHCR*PTLLAG
Trigger: ACCCGCCAGGAGTGTGGGCCAACGGCAGTGCTCCCC...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGGGCCTCCGCTCAGGGTaGGGAGCACTGCCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: GSGARLAAGPTADPAAREGLRSG*GALPLA
Trigger: GGCCAACGGCAGTGCTCCCCACCCTGAGCGGAGGCC...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGGGCCTCCGCTCAGGGTaGGGAGCACTGCCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRGLRSG*GALPLA
Trigger: GGCCAACGGCAGTGCTCCCCACCCTGAGCGGAGGCC...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCCTCACAGGAGCCAAGTaGAGCCCTGCTGGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKALTGAK*SPAGAL
Trigger: GAGCGCCCCAGCAGGGCTGCACTTGGCTCCTGTGAG...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGGGCGAGCACACCCACTaGGATGTCGGCCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGGEHTH*DVGRRQ
Trigger: CTGGCGGCGGCCGACATCGCAGTGGGTGTGCTCGCC...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCTGCAGTGTGGACCGTaGCCGCTCCCCCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGLQCGP*PLPRQR
Trigger: CCTCTGCCGGGGGAGCGGGCACGGTCCACACTGCAG...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCCACATGCCAGTGGCCTaGCAGCCCCAACCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKAHMPVA*QPQPLP
Trigger: GGGGAGAGGTTGGGGCTGGCAGGCCACTGGCATGTG...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGCCCTCCCCGCAGCCCTaGGAGTGGTTCTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GSGARLAAGPTADPAAREPSPQP*EWFLPS
Trigger: GGAGGGCAAGAACCACTCCCAGGGCTGCGGGGAGGG...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGCACACTCCTGGCGGGTaGCCGTTGAGACGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSCDSRRGLPEAPRAEALHTPGG*PLRRRL
Trigger: CAGCCTCCGTCTCAACGGCCACCCGCCAGGAGTGTG...CAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGGTTGGCCCACACTCCTaGCGGGTGGCCGTTGAGACG +
Preference number: 4 (lower is better)
Translates to: GSCDSRRGLPEAPRAEALVGPHS*RVAVET
Trigger: CGTCTCAACGGCCACCCGCCAGGAGTGTGGGCCAAC...CAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGGGGCCCACGCTGTGCTaGAAGCAGCTTGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGGPTLC*KQLGWG
Trigger: CCCCCAGCCAAGCTGCTTTCAGCACAGCGTGGGCCC...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337539.12
CDS-3UTR TCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGCGATGGCCAGGTACATaGGCCAGAGAGGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAERWPGT*AREGRG
Trigger: GCCACGCCCCTCTCTGGCTCATGTACCTGGCCATCG...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGAGCCAAGTGCAGCCCTaGTGGGGCGCTCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAESQVQP*WGALQG
Trigger: CCCTTGGAGAGCGCCCCAGCAGGGCTGCACTTGGCT...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCACAGGAGCCAAGTaGAGCCCTGCTGGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRLTGAK*SPAGAL
Trigger: GAGCGCCCCAGCAGGGCTGCACTTGGCTCCTGTGAG...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGCTCACGGTCCATTaGTGCAGCCCAGCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGQLTVH*CSPAAR
Trigger: GCGGGCGGCTGGGCTGCAGCAATGGACCGTGAGCTG...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCGCCCAGCAAAGATGCTaGTGGTGCTGTGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKAAQQRC*WCCGPH
Trigger: GTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGC...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGAGCACGGACGCGGGCTaGGCCAGCTCACGGTCCATT +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAESTDAG*ASSRSI
Trigger: AATGGACCGTGAGCTGGCCCAGCCCGCGTCCGTGCT...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCCCCCGGCAGAGGCTaGCTCTCCATCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKASPGRG*LSICFS
Trigger: GCTGAAGCAGATGGAGAGCCAGCCTCTGCCGGGGGA...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCCTCCTTCTGCAGTGTaGACCGTGCCCGCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGPPSAV*TVPAPP
Trigger: CGGGGGAGCGGGCACGGTCCACACTGCAGAAGGAGG...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCACACTCCTGGCGGGTaGCCGTTGAGACGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRHTPGG*PLRRRL
Trigger: CAGCCTCCGTCTCAACGGCCACCCGCCAGGAGTGTG...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCAGGCCCGTGTTCCCCTaGGACTCTTGGGCACTCCCT +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKARPVFP*DSWALP
Trigger: AGGGAGTGCCCAAGAGTCCCAGGGGAACACGGGCCT...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCCAGATGCTTCTGCAGTaGAGGGCTGGGCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKAQMLLQ*RAGPCP
Trigger: TGGGCAGGGCCCAGCCCTCCACTGCAGAAGCATCTG...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGCCCGGGCAGAGGCTCTaGTGCCAGGTTAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GSGARLAAGPTADPAAREPGQRL*CQVSSR
Trigger: CCTGCTGCTAACCTGGCACCAGAGCCTCTGCCCGGG...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCCTCAGCACATGCCAGTaGCCTGCCAGCCCCAACCTC +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKALSTCQ*PASPNL
Trigger: GAGGTTGGGGCTGGCAGGCCACTGGCATGTGCTGAG...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGACACGAGGCTTCACCTaGCAGCCCTCCTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGTRGFT*QPSSEG
Trigger: CCCCTCGGAGGAGGGCTGTCAGGTGAAGCCTCGTGT...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337539.12
CDS-3UTR TCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGGACGAAGCAGGCAATaGAGAGGCAGCCGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAEGRSRQ*RGSRGR
Trigger: CCTGCCACGGCTGCCTCTTCATTGCCTGCTTCGTCC...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCACGATGGCCAGGTACATaGGCCAGAGAGGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRARWPGT*AREGRG
Trigger: GCCACGCCCCTCTCTGGCTCATGTACCTGGCCATCG...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGTCTCCGTCACTGCCATaGGCTGCCAAGACCCGGGCA +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRSPSLP*AAKTRA
Trigger: TGCCCGGGTCTTGGCAGCTCATGGCAGTGACGGAGA...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCACCCCGCACCAAGGTaGTGGGGGCCCACGCTGTGC +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLHPAPR*WGPTLC
Trigger: GCACAGCGTGGGCCCCCAGCACCTTGGTGCGGGGTG...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337539.12
CDS-3UTR GCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAAGCCAAGTGCAGCCCTaGTGGGGCGCTCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRASQVQP*WGALQG
Trigger: CCCTTGGAGAGCGCCCCAGCAGGGCTGCACTTGGCT...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCACTCACAGGAGCCAAGTaGAGCCCTGCTGGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRALTGAK*SPAGAL
Trigger: GAGCGCCCCAGCAGGGCTGCACTTGGCTCCTGTGAG...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp TCCCCTGGGACCTGGGCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCCAGCTCACGGTCCATTaGTGCAGCCCAGCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: SPGTWAHALALLCYNSLSQLTVH*CSPAAR
Trigger: GCGGGCGGCTGGGCTGCAGCAATGGACCGTGAGCTG...GGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCGGCGAGCACACCCACTaGGATGTCGGCCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCGEHTH*DVGRRQ
Trigger: CTGGCGGCGGCCGACATCGCAGTGGGTGTGCTCGCC...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGGGCTGGCTCTCCATCTaGTTCAGCTGTCGTCGCGCC +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRGWLSI*FSCRRA
Trigger: GGCGCGACGACAGCTGAAGCAGATGGAGAGCCAGCC...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCACTGCAGTGTGGACCGTaGCCGCTCCCCCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: KASHWVALRYSAHASGLPLQCGP*PLPRQR
Trigger: CCTCTGCCGGGGGAGCGGGCACGGTCCACACTGCAG...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGGGTGGGGAGCACTaGCGTTGGCCCACACTCCTG +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGQGGEH*RWPTLL
Trigger: CAGGAGTGTGGGCCAACGGCAGTGCTCCCCACCCTG...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGTGGAGGGCTGGGCCCTaGCCAGCAAAGATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAEWRAGP*PAKMLL
Trigger: CAGCAGCATCTTTGCTGGGCAGGGCCCAGCCCTCCA...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGGGCAGAGGCTCTGGTaGCAGGTTAGCAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAEGQRLW*QVSSRT
Trigger: GGTCCTGCTGCTAACCTGGCACCAGAGCCTCTGCCC...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGACAGCAGGAGAGGACTaGCTGAGGCTCCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGTAGED*LRLPGQ
Trigger: CTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGT...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGCAAGTGCAGCCCTGCTaGGGCGCTCTCCAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: GSGARLAAGPTADPAAREQVQPC*GALQGL
Trigger: AAGCCCTTGGAGAGCGCCCCAGCAGGGCTGCACTTG...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTGGGAGTCAGGCCGATaGCAAACGACAGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKAWESGR*QTTAPS
Trigger: GCTGGGTGCTGTCGTTTGCCATCGGCCTGACTCCCA...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGTCCCCCGGCAGAGGCTaGCTCTCCATCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAESPGRG*LSICFS
Trigger: GCTGAAGCAGATGGAGAGCCAGCCTCTGCCGGGGGA...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCACCAGGGCATAGCCATTaGGCCTCCGCTCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRAPGHSH*ASAQGG
Trigger: CCCACCCTGAGCGGAGGCCCAATGGCTATGCCCTGG...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGAGGCCCGTGTTCCCCTaGGACTCTTGGGCACTCCCT +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRRPVFP*DSWALP
Trigger: AGGGAGTGCCCAAGAGTCCCAGGGGAACACGGGCCT...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGAAGGAGCTCCACGTCTaGGAGGCCCGTGTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRKELHV*EARVPL
Trigger: CAGGGGAACACGGGCCTCCCAGACGTGGAGCTCCTT...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGGCCCTCAGGGTCTCCTaGCACTCTCTCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GSCDSRRGLPEAPRAEALALRVS*HSLSSP
Trigger: GGGAGAAGAGAGAGAGTGCCAGGAGACCCTGAGGGC...CAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCACCCGGGCAGAGGCTCTaGTGCCAGGTTAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRAPGQRL*CQVSSR
Trigger: CCTGCTGCTAACCTGGCACCAGAGCCTCTGCCCGGG...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCACTCTCCCCTGGGACCTaGGCCCATGCTCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRALSPGT*AHALAL
Trigger: CAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGAGAG...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGCTCAGCACATGCCAGTaGCCTGCCAGCCCCAACCTC +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAELSTCQ*PASPNL
Trigger: GAGGTTGGGGCTGGCAGGCCACTGGCATGTGCTGAG...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGACACCGAGGAGCCCATaGTGGGCATGGCCACAGACG +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGTPRSP*WAWPQT
Trigger: CGTCTGTGGCCATGCCCATCATGGGCTCCTCGGTGT...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGTCTGCAGGTTGCTGTTaGGCCACACGGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAESAGCC*ATRPST
Trigger: TGTGCTGGGCCGTGTGGCTCAACAGCAACCTGCAGA...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGACACCAGCCGCCCTGTaGAAGGACAAGCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAETPAAL*KDKPET
Trigger: GGTCTCTGGCTTGTCCTTTCACAGGGCGGCTGGTGT...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610595.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCTCACGGTCCATTGCTaGAGCCCAGCCGCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLLTVHC*SPAARL
Trigger: CAGGCGGGCGGCTGGGCTGCAGCAATGGACCGTGAG...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCACAGCTCACGGTCCATTaGTGCAGCCCAGCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: KASHWVALRYSAHASGLPQLTVH*CSPAAR
Trigger: GCGGGCGGCTGGGCTGCAGCAATGGACCGTGAGCTG...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGAGCACACCAGCACATTaGCCAGGATGGCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: GSCDSRRGLPEAPRAEALSTPAH*PGWPAQ
Trigger: CTGTGCTGGCCATCCTGGGCAATGTGCTGGTGTGCT...CAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGCCTGGGAGTGGTTCTTaGCCTCCTTTGGCTGACCGC +
Preference number: 4 (lower is better)
Translates to: GSGARLAAGPTADPAAREPGSGS*PPLADR
Trigger: GCGGTCAGCCAAAGGAGGGCAAGAACCACTCCCAGG...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACTGCAGTGTGGACCGTaGCCGCTCCCCCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: KMLLVLWPPPGARPHSMKLQCGP*PLPRQR
Trigger: CCTCTGCCGGGGGAGCGGGCACGGTCCACACTGCAG...TTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGCATGGACCTCCTTCTaGAGTGTGGACCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRAAWTSF*SVDRAR
Trigger: GCGGGCACGGTCCACACTGCAGAAGGAGGTCCATGC...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGAGAGAGGGGCGTGGCTaGAGTCGGGGCAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: GSGARLAAGPTADPAAREREGRG*SRGRRK
Trigger: CTTTCTTCTGCCCCGACTGCAGCCACGCCCCTCTCT...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGCCTGCTCTCCGTCACTaGCATGAGCTGCCAAGACCC +
Preference number: 4 (lower is better)
Translates to: GSGARLAAGPTADPAAREPALRH*HELPRP
Trigger: GGGTCTTGGCAGCTCATGGCAGTGACGGAGAGCAGG...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGTCATCAGGACACTCCTaGTCCATCCTGGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAESSGHS*SILGQG
Trigger: CCCCTGGCCCAGGATGGAGCAGGAGTGTCCTGATGA...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTGGGACCTGGGCCCATaGTCTGGCACTGCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKAWDLGP*SGTALL
Trigger: TAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCA...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCCCCTCCCCGCAGCCCTaGGAGTGGTTCTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCPSPQP*EWFLPS
Trigger: GGAGGGCAAGAACCACTCCCAGGGCTGCGGGGAGGG...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCACCCTCCCCGCAGCCCTaGGAGTGGTTCTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: KASHWVALRYSAHASGLPPSPQP*EWFLPS
Trigger: GGAGGGCAAGAACCACTCCCAGGGCTGCGGGGAGGG...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGTCCCCCGGCAGAGGCTaGCTCTCCATCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGSPGRG*LSICFS
Trigger: GCTGAAGCAGATGGAGAGCCAGCCTCTGCCGGGGGA...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTGCTGCCTCAGGACGTaGCTGCGAATGATCTTGCGG +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKACCLRT*LRMILR
Trigger: CCGCAAGATCATTCGCAGCCACGTCCTGAGGCAGCA...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TCCCCTGGGACCTGGGCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCCACACTCCTGGCGGGTaGCCGTTGAGACGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SPGTWAHALALLCYNSLSHTPGG*PLRRRL
Trigger: CAGCCTCCGTCTCAACGGCCACCCGCCAGGAGTGTG...GGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TCCCCTGGGACCTGGGCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCGTTGGCCCACACTCCTaGCGGGTGGCCGTTGAGACG +
Preference number: 4 (lower is better)
Translates to: SPGTWAHALALLCYNSLSVGPHS*RVAVET
Trigger: CGTCTCAACGGCCACCCGCCAGGAGTGTGGGCCAAC...GGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAAAGGAGCTCCACGTCTaGGAGGCCCGTGTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRAKELHV*EARVPL
Trigger: CAGGGGAACACGGGCCTCCCAGACGTGGAGCTCCTT...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGAAGGAGCTCCACGTCTaGGAGGCCCGTGTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGKELHV*EARVPL
Trigger: CAGGGGAACACGGGCCTCCCAGACGTGGAGCTCCTT...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGACTCCTGCTCCATCCTaGGCCAGGGGGTCATCTAGG +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRTPAPS*ARGSSR
Trigger: CCTAGATGACCCCCTGGCCCAGGATGGAGCAGGAGT...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGACTCCTGCTCCATCCTaGGCCAGGGGGTCATCTAGG +
Preference number: 4 (lower is better)
Translates to: GSGARLAAGPTADPAARETPAPS*ARGSSR
Trigger: CCTAGATGACCCCCTGGCCCAGGATGGAGCAGGAGT...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCAGCAAAGATGCTGCTaGTGCTGTGGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRQQRCC*CCGPHL
Trigger: CAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTG...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCGCCCAAGCTGCTCTGTaGAGACAAGGTGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKAAQAAL*RQGGAS
Trigger: GGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGC...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCACTCAGCACATGCCAGTaGCCTGCCAGCCCCAACCTC +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRALSTCQ*PASPNL
Trigger: GAGGTTGGGGCTGGCAGGCCACTGGCATGTGCTGAG...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCGGTGCCTCCCACTCTaGACTCAGGGCCAAGGATCA +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRRCLPL*TQGQGS
Trigger: TGATCCTTGGCCCTGAGTCCAGAGTGGGAGGCACCG...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610595.4
CDS-3UTR TCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGAATAGACACCCAGCATaGGCAGCAGGGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRNRHPA*AAGAPA
Trigger: TGCTGGTGCCCCTGCTGCTCATGCTGGGTGTCTATT...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATCGATGGCCAGGTACATaGGCCAGAGAGGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHRWPGT*AREGRG
Trigger: GCCACGCCCCTCTCTGGCTCATGTACCTGGCCATCG...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGGACGTGGCTGCGAATaGTCTTGCGGAAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRAGRGCE*SCGRSG
Trigger: GCCAGACCTTCCGCAAGATCATTCGCAGCCACGTCC...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp TCCCCTGGGACCTGGGCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTCTCCGTCACTGCCATaGGCTGCCAAGACCCGGGCA +
Preference number: 4 (lower is better)
Translates to: SPGTWAHALALLCYNSLSSPSLP*AAKTRA
Trigger: TGCCCGGGTCTTGGCAGCTCATGGCAGTGACGGAGA...GGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGAGATGGCCCTGGGACTaGGAAGTGGATGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAERWPWD*EVDGSC
Trigger: ACAGCTGCCATCCACTTCTCAGTCCCAGGGCCATCT...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACTCACGGTCCATTGCTaGAGCCCAGCCGCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: KMLLVLWPPPGARPHSMKLTVHC*SPAARL
Trigger: CAGGCGGGCGGCTGGGCTGCAGCAATGGACCGTGAG...TTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGAGCACACCAGCACATTaGCCAGGATGGCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRSTPAH*PGWPAQ
Trigger: CTGTGCTGGCCATCCTGGGCAATGTGCTGGTGTGCT...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGTACCGGAGCGGGATaGGGATGGCAATGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: GSGARLAAGPTADPAARECTGAG*GWQCSG
Trigger: ACCGCTACATTGCCATCCGCATCCCGCTCCGGTACA...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp TCCCCTGGGACCTGGGCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCGGCTGGCTCTCCATCTaGTTCAGCTGTCGTCGCGCC +
Preference number: 4 (lower is better)
Translates to: SPGTWAHALALLCYNSLSGWLSI*FSCRRA
Trigger: GGCGCGACGACAGCTGAAGCAGATGGAGAGCCAGCC...GGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGCTGCAGTGTGGACCGTaGCCGCTCCCCCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWLQCGP*PLPRQR
Trigger: CCTCTGCCGGGGGAGCGGGCACGGTCCACACTGCAG...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAAGAGAGGGGCGTGGCTaGAGTCGGGGCAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRAREGRG*SRGRRK
Trigger: CTTTCTTCTGCCCCGACTGCAGCCACGCCCCTCTCT...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCGGCACTGGTGCCAGCTaGCTTGAAAGGTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKAGTGAS*LERFLL
Trigger: CAGCAAGAACCTTTCAAGGCAGCTGGCACCAGTGCC...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGGGCACTGGTGCCAGCTaGCTTGAAAGGTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GSCDSRRGLPEAPRAEALGTGAS*LERFLL
Trigger: CAGCAAGAACCTTTCAAGGCAGCTGGCACCAGTGCC...CAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGGTCACTGCCATGAGCTaGCAAGACCCGGGCACTGGT +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGVTAMS*QDPGTG
Trigger: ACCAGTGCCCGGGTCTTGGCAGCTCATGGCAGTGAC...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCCTGCTCTCCGTCACTaGCATGAGCTGCCAAGACCC +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGPALRH*HELPRP
Trigger: GGGTCTTGGCAGCTCATGGCAGTGACGGAGAGCAGG...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCATCATCAGGACACTCCTaGTCCATCCTGGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRASSGHS*SILGQG
Trigger: CCCCTGGCCCAGGATGGAGCAGGAGTGTCCTGATGA...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp TCCCCTGGGACCTGGGCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTCTTGCTGGGCCTCATaGTGCTCCAGCCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SPGTWAHALALLCYNSLSSCWAS*CSSLGL
Trigger: GAGCCCCAGGCTGGAGCAGCATGAGGCCCAGCAAGA...GGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGAACCCAAGCCCTTCTTaGTGGGCCTCATGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GSGARLAAGPTADPAARENPSPS*WASCCS
Trigger: GGAGCAGCATGAGGCCCAGCAAGAAGGGCTTGGGTT...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGGTGGCCCCCACCTGGTaGAAGGCCTCACAGCATGAA +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGVAPTW*KASQHE
Trigger: TTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCAC...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGGGTGGTGCTTCCAGATaGTTCTGCAGTGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRGGASR*FCSGGL
Trigger: CAGCCCTCCACTGCAGAAGCATCTGGAAGCACCACC...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCACAGCAGGAGAGGACTaGCTGAGGCTCCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCTAGED*LRLPGQ
Trigger: CTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGT...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCACACATGCCAGTGGCCTaGCAGCCCCAACCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: KASHWVALRYSAHASGLPHMPVA*QPQPLP
Trigger: GGGGAGAGGTTGGGGCTGGCAGGCCACTGGCATGTG...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATCACATGCCAGTGGCCTaGCAGCCCCAACCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHHMPVA*QPQPLP
Trigger: GGGGAGAGGTTGGGGCTGGCAGGCCACTGGCATGTG...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGGCGCTACTCAGCACATaGCAGTGGCCTGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLALLST*QWPASP
Trigger: GGGGCTGGCAGGCCACTGGCATGTGCTGAGTAGCGC...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACCCGCTGCCTCCAGGTaGCCCTGCCAGTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KMLLVLWPPPGARPHSMKPAASR*PCQSAA
Trigger: TGCAGCTGACTGGCAGGGGCACCTGGAGGCAGCGGG...TTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000610595.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGCCTCTGCAGGGGTTCTaGCAGCAGCATCATGGCTCA +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAEPLQGF*QQHHGS
Trigger: TGAGCCATGATGCTGCTGCCAGAACCCCTGCAGAGG...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCCTCTGCAGGGGTTCTaGCAGCAGCATCATGGCTCA +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRPLQGF*QQHHGS
Trigger: TGAGCCATGATGCTGCTGCCAGAACCCCTGCAGAGG...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGGCACATTGCCCAGGATaGCCAGCACAGCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: GSGARLAAGPTADPAAREAHCPG*PAQQWP
Trigger: TGGCCATTGCTGTGCTGGCCATCCTGGGCAATGTGC...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGGCACATTGCCCAGGATaGCCAGCACAGCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRAHCPG*PAQQWP
Trigger: TGGCCATTGCTGTGCTGGCCATCCTGGGCAATGTGC...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTCCTCCTTCTGCAGTGTaGACCGTGCCCGCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPPPSAV*TVPAPP
Trigger: CGGGGGAGCGGGCACGGTCCACACTGCAGAAGGAGG...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCACAACCGAATTGGTGTaGGAGAGGACGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKATTELV*ERTMAR
Trigger: CCTGGCCATCGTCCTCTCCCACACCAATTCGGTTGT...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGATCTTGCGGAAGGTCTaGCGGAACTCGCGGATACGG +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRILRKV*RNSRIR
Trigger: CCGTATCCGCGAGTTCCGCCAGACCTTCCGCAAGAT...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGATCTTGCGGAAGGTCTaGCGGAACTCGCGGATACGG +
Preference number: 4 (lower is better)
Translates to: GSGARLAAGPTADPAAREILRKV*RNSRIR
Trigger: CCGTATCCGCGAGTTCCGCCAGACCTTCCGCAAGAT...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGTGCTGCCTCAGGACGTaGCTGCGAATGATCTTGCGG +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRCCLRT*LRMILR
Trigger: CCGCAAGATCATTCGCAGCCACGTCCTGAGGCAGCA...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTGGGGAGCACTGCCGTTaGCCCACACTCCTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPGEHCR*PTLLAG
Trigger: ACCCGCCAGGAGTGTGGGCCAACGGCAGTGCTCCCC...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCAGGGCATAGCCATTaGGCCTCCGCTCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLPGHSH*ASAQGG
Trigger: CCCACCCTGAGCGGAGGCCCAATGGCTATGCCCTGG...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGACTCCTGCTCCATCCTaGGCCAGGGGGTCATCTAGG +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGTPAPS*ARGSSR
Trigger: CCTAGATGACCCCCTGGCCCAGGATGGAGCAGGAGT...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGCCCTCAGGGTCTCCTaGCACTCTCTCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRAALRVS*HSLSSP
Trigger: GGGAGAAGAGAGAGAGTGCCAGGAGACCCTGAGGGC...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATCTCTCCCCTGGGACCTaGGCCCATGCTCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHLSPGT*AHALAL
Trigger: CAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGAGAG...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCACTCTCCCCTGGGACCTaGGCCCATGCTCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: KASHWVALRYSAHASGLPLSPGT*AHALAL
Trigger: CAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGAGAG...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGTGGCCAGCTCCACCGTaGTGTACACCGAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLWPAPP*CTPRSP
Trigger: TGGGCTCCTCGGTGTACATCACGGTGGAGCTGGCCA...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATTGGCCAGCTCCACCGTaGTGTACACCGAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHWPAPP*CTPRSP
Trigger: TGGGCTCCTCGGTGTACATCACGGTGGAGCTGGCCA...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGTTGCCCTCCTTTGGCTaGCCGCAGTTGTTCCAACCT +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRLPSFG*PQLFQP
Trigger: AGGTTGGAACAACTGCGGTCAGCCAAAGGAGGGCAA...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGAATAGACACCCAGCATaGGCAGCAGGGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGNRHPA*AAGAPA
Trigger: TGCTGGTGCCCCTGCTGCTCATGCTGGGTGTCTATT...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCACAATGATGGCCAGTaGCTTGGCAGCATGGACCTC +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRHNDGQ*LGSMDL
Trigger: GAGGTCCATGCTGCCAAGTCACTGGCCATCATTGTG...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCTCTCCGTCACTGCCATaGGCTGCCAAGACCCGGGCA +
Preference number: 4 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCSPSLP*AAKTRA
Trigger: TGCCCGGGTCTTGGCAGCTCATGGCAGTGACGGAGA...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGTCTCTTCTCCCAACGTaGCTGGTCAAGCCAACCAGA +
Preference number: 4 (lower is better)
Translates to: GSCDSRRGLPEAPRAEALSLLPT*LVKPTR
Trigger: TCTGGTTGGCTTGACCAGTCACGTTGGGAGAAGAGA...CAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAAGATGGCCCTGGGACTaGGAAGTGGATGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRARWPWD*EVDGSC
Trigger: ACAGCTGCCATCCACTTCTCAGTCCCAGGGCCATCT...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGACAACTCCCTGTCCTTaGTCCCAGCTTTGTCACTCC +
Preference number: 4 (lower is better)
Translates to: GSCDSRRGLPEAPRAEALTTPCP*SQLCHS
Trigger: GGAGTGACAAAGCTGGGATCAAGGACAGGGAGTTGT...CAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACTCACAGGAGCCAAGTaGAGCCCTGCTGGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: KMLLVLWPPPGARPHSMKLTGAK*SPAGAL
Trigger: GAGCGCCCCAGCAGGGCTGCACTTGGCTCCTGTGAG...TTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGTGTACCGGAGCGGGATaGGGATGGCAATGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGCTGAG*GWQCSG
Trigger: ACCGCTACATTGCCATCCGCATCCCGCTCCGGTACA...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGGGCTGGCTCTCCATCTaGTTCAGCTGTCGTCGCGCC +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLGWLSI*FSCRRA
Trigger: GGCGCGACGACAGCTGAAGCAGATGGAGAGCCAGCC...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGGCATGGACCTCCTTCTaGAGTGTGGACCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLAWTSF*SVDRAR
Trigger: GCGGGCACGGTCCACACTGCAGAAGGAGGTCCATGC...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCAGCATGGACCTCCTTCTaGAGTGTGGACCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: KASHWVALRYSAHASGLPAWTSF*SVDRAR
Trigger: GCGGGCACGGTCCACACTGCAGAAGGAGGTCCATGC...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCGCATGGACCTCCTTCTaGAGTGTGGACCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCAWTSF*SVDRAR
Trigger: GCGGGCACGGTCCACACTGCAGAAGGAGGTCCATGC...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGTTGAAAGGTTCTTGCTaGCTCAGGACGTGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: GSCDSRRGLPEAPRAEALLKGSC*LRTWLR
Trigger: TCGCAGCCACGTCCTGAGGCAGCAAGAACCTTTCAA...CAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp TCCCCTGGGACCTGGGCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCGTCACTGCCATGAGCTaGCAAGACCCGGGCACTGGT +
Preference number: 4 (lower is better)
Translates to: SPGTWAHALALLCYNSLSVTAMS*QDPGTG
Trigger: ACCAGTGCCCGGGTCTTGGCAGCTCATGGCAGTGAC...GGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACAGGGTGGGGAGCACTaGCGTTGGCCCACACTCCTG +
Preference number: 4 (lower is better)
Translates to: KMLLVLWPPPGARPHSMKQGGEH*RWPTLL
Trigger: CAGGAGTGTGGGCCAACGGCAGTGCTCCCCACCCTG...TTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAAAAGTAGGAACCGGCTaGCCTCAGGGTCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRAKVGTG*PQGLLA
Trigger: TGCCAGGAGACCCTGAGGGCAGCCGGTTCCTACTTT...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCTCTTGCTGGGCCTCATaGTGCTCCAGCCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCSCWAS*CSSLGL
Trigger: GAGCCCCAGGCTGGAGCAGCATGAGGCCCAGCAAGA...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCTGGAGGGCTGGGCCCTaGCCAGCAAAGATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCWRAGP*PAKMLL
Trigger: CAGCAGCATCTTTGCTGGGCAGGGCCCAGCCCTCCA...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGGGTGGTGCTTCCAGATaGTTCTGCAGTGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGGGASR*FCSGGL
Trigger: CAGCCCTCCACTGCAGAAGCATCTGGAAGCACCACC...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGAGGGCCAGGCCAGTCTaGTGTGCCCAAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLRARPV*CAQAAL
Trigger: CAGAGCAGCTTGGGCACAGCAGACTGGCCTGGCCCT...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATAGGGCCAGGCCAGTCTaGTGTGCCCAAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHRARPV*CAQAAL
Trigger: CAGAGCAGCTTGGGCACAGCAGACTGGCCTGGCCCT...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGGGCAGAGGCTCTGGTaGCAGGTTAGCAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHGQRLW*QVSSRT
Trigger: GGTCCTGCTGCTAACCTGGCACCAGAGCCTCTGCCC...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCCCCATGCTCTGGCACTaGTCTGTTACAACTCCCTGT +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKAPMLWH*SVTTPC
Trigger: ACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGG...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATCAAGTGCAGCCCTGCTaGGGCGCTCTCCAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHQVQPC*GALQGL
Trigger: AAGCCCTTGGAGAGCGCCCCAGCAGGGCTGCACTTG...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTGTTCCAACCTAGCATaGGAGTCAGGCCGATGGCAA +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKACSNLA*ESGRWQ
Trigger: TTGCCATCGGCCTGACTCCCATGCTAGGTTGGAACA...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCTCCCCCGGCAGAGGCTaGCTCTCCATCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCSPGRG*LSICFS
Trigger: GCTGAAGCAGATGGAGAGCCAGCCTCTGCCGGGGGA...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGCCTCCTTCTGCAGTGTaGACCGTGCCCGCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWPPSAV*TVPAPP
Trigger: CGGGGGAGCGGGCACGGTCCACACTGCAGAAGGAGG...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAATCTTGCGGAAGGTCTaGCGGAACTCGCGGATACGG +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRAILRKV*RNSRIR
Trigger: CCGTATCCGCGAGTTCCGCCAGACCTTCCGCAAGAT...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGTGCTGCCTCAGGACGTaGCTGCGAATGATCTTGCGG +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGCCLRT*LRMILR
Trigger: CCGCAAGATCATTCGCAGCCACGTCCTGAGGCAGCA...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTCCAGGGCATAGCCATTaGGCCTCCGCTCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPPGHSH*ASAQGG
Trigger: CCCACCCTGAGCGGAGGCCCAATGGCTATGCCCTGG...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGAGGCCCGTGTTCCCCTaGGACTCTTGGGCACTCCCT +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLRPVFP*DSWALP
Trigger: AGGGAGTGCCCAAGAGTCCCAGGGGAACACGGGCCT...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCACTCCCTTGAGCTCATaGCTAAGGAGCTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKATPLSS*LRSSTS
Trigger: AGACGTGGAGCTCCTTAGCCATGAGCTCAAGGGAGT...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TCCCCTGGGACCTGGGCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCCAGCAAAGATGCTGCTaGTGCTGTGGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: SPGTWAHALALLCYNSLSQQRCC*CCGPHL
Trigger: CAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTG...GGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGGCCCAAGCTGCTCTGTaGAGACAAGGTGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGAQAAL*RQGGAS
Trigger: GGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGC...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACCCGGGCAGAGGCTCTaGTGCCAGGTTAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KMLLVLWPPPGARPHSMKPGQRL*CQVSSR
Trigger: CCTGCTGCTAACCTGGCACCAGAGCCTCTGCCCGGG...TTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATCTCAGCACATGCCAGTaGCCTGCCAGCCCCAACCTC +
Preference number: 4 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHLSTCQ*PASPNL
Trigger: GAGGTTGGGGCTGGCAGGCCACTGGCATGTGCTGAG...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGGACAAGGCCTCTCACTaGGTAGCTCTGCGCTACTCA +
Preference number: 4 (lower is better)
Translates to: GSGARLAAGPTADPAAREDKASH*VALRYS
Trigger: TGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCATGTGGGGAGCTGCCTaGTCCTGTCTCCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCMWGAA*SCLPLP
Trigger: CGGCAGTGGGAGACAGGACCAGGCAGCTCCCCACAT...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610595.4
ENST00000618076.3
CDS-3UTR TCA 90 bp AAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAAGGACGAAGCAGGCAATaGAGAGGCAGCCGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: KMLLVLWPPPGARPHSMKGRSRQ*RGSRGR
Trigger: CCTGCCACGGCTGCCTCTTCATTGCCTGCTTCGTCC...TTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCAGGACGTGGCTGCGAATaGTCTTGCGGAAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: KASHWVALRYSAHASGLPGRGCE*SCGRSG
Trigger: GCCAGACCTTCCGCAAGATCATTCGCAGCCACGTCC...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGGGACGTGGCTGCGAATaGTCTTGCGGAAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLGRGCE*SCGRSG
Trigger: GCCAGACCTTCCGCAAGATCATTCGCAGCCACGTCC...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCCAGCTTCAGGGTTCCTaGGGCACCCCAGCACTATCC +
Preference number: 4 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCQLQGS*GTPALS
Trigger: GGATAGTGCTGGGGTGCCTCAGGAACCCTGAAGCTG...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610595.4
CDS-3UTR GCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGCAGCTCACGGTCCATTaGTGCAGCCCAGCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: AHALALLCYNSLSLIPALQLTVH*CSPAAR
Trigger: GCGGGCGGCTGGGCTGCAGCAATGGACCGTGAGCTG...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp TCCCCTGGGACCTGGGCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCAGCACACCAGCACATTaGCCAGGATGGCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: SPGTWAHALALLCYNSLSSTPAH*PGWPAQ
Trigger: CTGTGCTGGCCATCCTGGGCAATGTGCTGGTGTGCT...GGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATCCTGGGAGTGGTTCTTaGCCTCCTTTGGCTGACCGC +
Preference number: 4 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHPGSGS*PPLADR
Trigger: GCGGTCAGCCAAAGGAGGGCAAGAACCACTCCCAGG...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCACCTGGGAGTGGTTCTTaGCCTCCTTTGGCTGACCGC +
Preference number: 4 (lower is better)
Translates to: KASHWVALRYSAHASGLPPGSGS*PPLADR
Trigger: GCGGTCAGCCAAAGGAGGGCAAGAACCACTCCCAGG...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGTTGAAAGGTTCTTGCTaGCTCAGGACGTGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRLKGSC*LRTWLR
Trigger: TCGCAGCCACGTCCTGAGGCAGCAAGAACCTTTCAA...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGGCCTTGAAAGGTTCTTaGTGCCTCAGGACGTGGCTG +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGALKGS*CLRTWL
Trigger: CAGCCACGTCCTGAGGCAGCAAGAACCTTTCAAGGC...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGGCACTGGTGCCAGCTaGCTTGAAAGGTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRAGTGAS*LERFLL
Trigger: CAGCAAGAACCTTTCAAGGCAGCTGGCACCAGTGCC...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGTCACTGCCATGAGCTaGCAAGACCCGGGCACTGGT +
Preference number: 4 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHVTAMS*QDPGTG
Trigger: ACCAGTGCCCGGGTCTTGGCAGCTCATGGCAGTGAC...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCCCTGCTCTCCGTCACTaGCATGAGCTGCCAAGACCC +
Preference number: 4 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCPALRH*HELPRP
Trigger: GGGTCTTGGCAGCTCATGGCAGTGACGGAGAGCAGG...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCACCTGCTCTCCGTCACTaGCATGAGCTGCCAAGACCC +
Preference number: 4 (lower is better)
Translates to: KASHWVALRYSAHASGLPPALRH*HELPRP
Trigger: GGGTCTTGGCAGCTCATGGCAGTGACGGAGAGCAGG...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGCAGGGTGGGGAGCACTaGCGTTGGCCCACACTCCTG +
Preference number: 4 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWQGGEH*RWPTLL
Trigger: CAGGAGTGTGGGCCAACGGCAGTGCTCCCCACCCTG...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCTCATCAGGACACTCCTaGTCCATCCTGGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCSSGHS*SILGQG
Trigger: CCCCTGGCCCAGGATGGAGCAGGAGTGTCCTGATGA...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAATCTTGCTGGGCCTCATaGTGCTCCAGCCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: KMLLVLWPPPGARPHSMKSCWAS*CSSLGL
Trigger: GAGCCCCAGGCTGGAGCAGCATGAGGCCCAGCAAGA...TTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGGTGGCCCCCACCTGGTaGAAGGCCTCACAGCATGAA +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLVAPTW*KASQHE
Trigger: TTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCAC...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCACAAAGATGCTGCTGGTaGTGTGGCCCCCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: KASHWVALRYSAHASGLPQRCCW*CGPHLV
Trigger: CACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTG...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTGCCCAGCAAAGATGCTaGTGGTGCTGTGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPAQQRC*WCCGPH
Trigger: GTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGC...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCACAGGCCAGTCTGCTGTaGCCAAGCTGCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: KASHWVALRYSAHASGLPQASLL*PSCSVE
Trigger: CTCCACAGAGCAGCTTGGGCACAGCAGACTGGCCTG...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATCAGGCCAGTCTGCTGTaGCCAAGCTGCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHQASLL*PSCSVE
Trigger: CTCCACAGAGCAGCTTGGGCACAGCAGACTGGCCTG...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAAGGGCAGAGGCTCTGGTaGCAGGTTAGCAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: KMLLVLWPPPGARPHSMKGQRLW*QVSSRT
Trigger: GGTCCTGCTGCTAACCTGGCACCAGAGCCTCTGCCC...TTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp TCCCCTGGGACCTGGGCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCAAGGATGTGGGGAGCTaGCTGGTCCTGTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: SPGTWAHALALLCYNSLSKDVGS*LVLSPT
Trigger: AGTGGGAGACAGGACCAGGCAGCTCCCCACATCCTT...GGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610595.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCACTGCATTCCCTGCTCTaGGCATTGTTGTCACGGTGC +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRALHSLL*ALLSRC
Trigger: GCACCGTGACAACAATGCGCAGAGCAGGGAATGCAG...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610595.4
CDS-3UTR CCA 90 bp AAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACAAGTGCAGCCCTGCTaGGGCGCTCTCCAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: KMLLVLWPPPGARPHSMKQVQPC*GALQGL
Trigger: AAGCCCTTGGAGAGCGCCCCAGCAGGGCTGCACTTG...TTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGAGCACGGACGCGGGCTaGGCCAGCTCACGGTCCATT +
Preference number: 4 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWSTDAG*ASSRSI
Trigger: AATGGACCGTGAGCTGGCCCAGCCCGCGTCCGTGCT...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCTGGGAGTCAGGCCGATaGCAAACGACAGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCWESGR*QTTAPS
Trigger: GCTGGGTGCTGTCGTTTGCCATCGGCCTGACTCCCA...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGTGGGAGTCAGGCCGATaGCAAACGACAGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLWESGR*QTTAPS
Trigger: GCTGGGTGCTGTCGTTTGCCATCGGCCTGACTCCCA...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGTGTTCCAACCTAGCATaGGAGTCAGGCCGATGGCAA +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAECSNLA*ESGRWQ
Trigger: TTGCCATCGGCCTGACTCCCATGCTAGGTTGGAACA...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGTTCTTGCCCTCCTTTaGCTGACCGCAGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAEVLALL*LTAVVP
Trigger: TGGAACAACTGCGGTCAGCCAAAGGAGGGCAAGAAC...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGACAACCGAATTGGTGTaGGAGAGGACGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGTTELV*ERTMAR
Trigger: CCTGGCCATCGTCCTCTCCCACACCAATTCGGTTGT...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGACTCCCTTGAGCTCATaGCTAAGGAGCTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRTPLSS*LRSSTS
Trigger: AGACGTGGAGCTCCTTAGCCATGAGCTCAAGGGAGT...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATACTCCTGCTCCATCCTaGGCCAGGGGGTCATCTAGG +
Preference number: 4 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHTPAPS*ARGSSR
Trigger: CCTAGATGACCCCCTGGCCCAGGATGGAGCAGGAGT...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTCAGATGCTTCTGCAGTaGAGGGCTGGGCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPQMLLQ*RAGPCP
Trigger: TGGGCAGGGCCCAGCCCTCCACTGCAGAAGCATCTG...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCACCTGGAGCTCGGATGTaGAAGGATGTGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KASHWVALRYSAHASGLPPGARM*KDVGSC
Trigger: GCAGCTCCCCACATCCTTCCACATCCGAGCTCCAGG...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610595.4
ENST00000618076.3
CDS-3UTR TCA 90 bp AAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAATCTGCAGGTTGCTGTTaGGCCACACGGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: KMLLVLWPPPGARPHSMKSAGCC*ATRPST
Trigger: TGTGCTGGGCCGTGTGGCTCAACAGCAACCTGCAGA...TTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGCCACAAAGTAGTTGGTaGCGTTCTGCAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAEPQSSW*RSAGCC
Trigger: ACAGCAACCTGCAGAACGTCACCAACTACTTTGTGG...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGGGACGAAGCAGGCAATaGAGAGGCAGCCGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWGRSRQ*RGSRGR
Trigger: CCTGCCACGGCTGCCTCTTCATTGCCTGCTTCGTCC...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGTACGGTAGGCGTAGATaGAGGGATTCACAACCGAAT +
Preference number: 4 (lower is better)
Translates to: GSCDSRRGLPEAPRAEALYGRRR*RDSQPN
Trigger: ATTCGGTTGTGAATCCCTTCATCTACGCCTACCGTA...CAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTACGGTAGGCGTAGATaGAGGGATTCACAACCGAAT +
Preference number: 4 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKAYGRRR*RDSQPN
Trigger: ATTCGGTTGTGAATCCCTTCATCTACGCCTACCGTA...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCATCTCTTCTCCCAACGTaGCTGGTCAAGCCAACCAGA +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRASLLPT*LVKPTR
Trigger: TCTGGTTGGCTTGACCAGTCACGTTGGGAGAAGAGA...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGAGATGGCCCTGGGACTaGGAAGTGGATGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLRWPWD*EVDGSC
Trigger: ACAGCTGCCATCCACTTCTCAGTCCCAGGGCCATCT...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGACAACTCCCTGTCCTTaGTCCCAGCTTTGTCACTCC +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGTTPCP*SQLCHS
Trigger: GGAGTGACAAAGCTGGGATCAAGGACAGGGAGTTGT...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGGCTGGGGGCGGCTCCTaGTCCATGTCACAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: AHALALLCYNSLSLIPALAGGGS*SMSQSL
Trigger: CAGGGACTGTGACATGGAGCAGGAGCCGCCCCCAGC...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337539.12
CDS-3UTR GCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATAGGCGAGCACACCCACTaGGATGTCGGCCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIGEHTH*DVGRRQ
Trigger: CTGGCGGCGGCCGACATCGCAGTGGGTGTGCTCGCC...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGTGTACCGGAGCGGGATaGGGATGGCAATGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLCTGAG*GWQCSG
Trigger: ACCGCTACATTGCCATCCGCATCCCGCTCCGGTACA...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAAAGAGAGGGGCGTGGCTaGAGTCGGGGCAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: KMLLVLWPPPGARPHSMKREGRG*SRGRRK
Trigger: CTTTCTTCTGCCCCGACTGCAGCCACGCCCCTCTCT...TTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTAGAGAGGGGCGTGGCTaGAGTCGGGGCAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPREGRG*SRGRRK
Trigger: CTTTCTTCTGCCCCGACTGCAGCCACGCCCCTCTCT...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCATTGAAAGGTTCTTGCTaGCTCAGGACGTGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRALKGSC*LRTWLR
Trigger: TCGCAGCCACGTCCTGAGGCAGCAAGAACCTTTCAA...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTTCATCAGGACACTCCTaGTCCATCCTGGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPSSGHS*SILGQG
Trigger: CCCCTGGCCCAGGATGGAGCAGGAGTGTCCTGATGA...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCAAAGTAGGAACCGGCTaGCCTCAGGGTCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCKVGTG*PQGLLA
Trigger: TGCCAGGAGACCCTGAGGGCAGCCGGTTCCTACTTT...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTGTGGCCCCCACCTGGTaGAAGGCCTCACAGCATGAA +
Preference number: 4 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPVAPTW*KASQHE
Trigger: TTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCAC...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGGCCCAGCAAAGATGCTaGTGGTGCTGTGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWAQQRC*WCCGPH
Trigger: GTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGC...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCTGCTGTGCCCAAGCTaGTCTGTGGAGACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLLLCPS*SVETRW
Trigger: CCACCTTGTCTCCACAGAGCAGCTTGGGCACAGCAG...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCACTGCTGTGCCCAAGCTaGTCTGTGGAGACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: KASHWVALRYSAHASGLPLLCPS*SVETRW
Trigger: CCACCTTGTCTCCACAGAGCAGCTTGGGCACAGCAG...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGAGGGCCAGGCCAGTCTaGTGTGCCCAAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWRARPV*CAQAAL
Trigger: CAGAGCAGCTTGGGCACAGCAGACTGGCCTGGCCCT...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGACAGCAGGAGAGGACTaGCTGAGGCTCCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: AHALALLCYNSLSLIPALTAGED*LRLPGQ
Trigger: CTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGT...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCCCATGCTCTGGCACTaGTCTGTTACAACTCCCTGT +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGPMLWH*SVTTPC
Trigger: ACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGG...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGTGGGACCTGGGCCCATaGTCTGGCACTGCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLWDLGP*SGTALL
Trigger: TAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCA...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGGCGCTACTCAGCACATaGCAGTGGCCTGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: AHALALLCYNSLSLIPALALLST*QWPASP
Trigger: GGGGCTGGCAGGCCACTGGCATGTGCTGAGTAGCGC...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp TCCCCTGGGACCTGGGCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCGCTCCCTGCATTCCCTaGTCTGCGCATTGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: SPGTWAHALALLCYNSLSAPCIP*SAHCCH
Trigger: GTGACAACAATGCGCAGAGCAGGGAATGCAGGGAGC...GGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610595.4
CDS-3UTR CCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGGTTCTTGCCCTCCTTTaGCTGACCGCAGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGVLALL*LTAVVP
Trigger: TGGAACAACTGCGGTCAGCCAAAGGAGGGCAAGAAC...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGGTTGGCCCACACTCCTaGCGGGTGGCCGTTGAGACG +
Preference number: 4 (lower is better)
Translates to: AHALALLCYNSLSLIPALVGPHS*RVAVET
Trigger: CGTCTCAACGGCCACCCGCCAGGAGTGTGGGCCAAC...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAACTCCCTTGAGCTCATaGCTAAGGAGCTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRATPLSS*LRSSTS
Trigger: AGACGTGGAGCTCCTTAGCCATGAGCTCAAGGGAGT...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGTTCTCCCAACGTGACTaGTCAAGCCAACCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GSCDSRRGLPEAPRAEALFSQRD*SSQPER
Trigger: TCTTTCTGGTTGGCTTGACCAGTCACGTTGGGAGAA...CAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTCAGCAAAGATGCTGCTaGTGCTGTGGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPQQRCC*CCGPHL
Trigger: CAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTG...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGCCCGGGCAGAGGCTCTaGTGCCAGGTTAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AHALALLCYNSLSLIPALPGQRL*CQVSSR
Trigger: CCTGCTGCTAACCTGGCACCAGAGCCTCTGCCCGGG...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGATGTGGGGAGCTGCCTaGTCCTGTCTCCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWMWGAA*SCLPLP
Trigger: CGGCAGTGGGAGACAGGACCAGGCAGCTCCCCACAT...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610595.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCAGGATGTGGAAGGATGTaGGGAGCTGCCTGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: KASHWVALRYSAHASGLPGCGRM*GAAWSC
Trigger: ACAGGACCAGGCAGCTCCCCACATCCTTCCACATCC...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610595.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGGGATGTGGAAGGATGTaGGGAGCTGCCTGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLGCGRM*GAAWSC
Trigger: ACAGGACCAGGCAGCTCCCCACATCCTTCCACATCC...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610595.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGACACCGAGGAGCCCATaGTGGGCATGGCCACAGACG +
Preference number: 4 (lower is better)
Translates to: AHALALLCYNSLSLIPALTPRSP*WAWPQT
Trigger: CGTCTGTGGCCATGCCCATCATGGGCTCCTCGGTGT...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATTTGCCCTCCTTTGGCTaGCCGCAGTTGTTCCAACCT +
Preference number: 4 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHLPSFG*PQLFQP
Trigger: AGGTTGGAACAACTGCGGTCAGCCAAAGGAGGGCAA...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCATTGCCCTCCTTTGGCTaGCCGCAGTTGTTCCAACCT +
Preference number: 4 (lower is better)
Translates to: KASHWVALRYSAHASGLPLPSFG*PQLFQP
Trigger: AGGTTGGAACAACTGCGGTCAGCCAAAGGAGGGCAA...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCACACAATGATGGCCAGTaGCTTGGCAGCATGGACCTC +
Preference number: 4 (lower is better)
Translates to: KASHWVALRYSAHASGLPHNDGQ*LGSMDL
Trigger: GAGGTCCATGCTGCCAAGTCACTGGCCATCATTGTG...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATACTCACGGTCCATTGCTaGAGCCCAGCCGCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKILTVHC*SPAARL
Trigger: CAGGCGGGCGGCTGGGCTGCAGCAATGGACCGTGAG...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGGGCACTGGTGCCAGCTaGCTTGAAAGGTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLGTGAS*LERFLL
Trigger: CAGCAAGAACCTTTCAAGGCAGCTGGCACCAGTGCC...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAAAACCCAAGCCCTTCTTaGTGGGCCTCATGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KMLLVLWPPPGARPHSMKNPSPS*WASCCS
Trigger: GGAGCAGCATGAGGCCCAGCAAGAAGGGCTTGGGTT...TTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGGTGGCCCCCACCTGGTaGAAGGCCTCACAGCATGAA +
Preference number: 4 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWVAPTW*KASQHE
Trigger: TTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCAC...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTCTGCTGTGCCCAAGCTaGTCTGTGGAGACAAGGTGG +
Preference number: 4 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPLLCPS*SVETRW
Trigger: CCACCTTGTCTCCACAGAGCAGCTTGGGCACAGCAG...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTAAGGATGTGGGGAGCTaGCTGGTCCTGTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPKDVGS*LVLSPT
Trigger: AGTGGGAGACAGGACCAGGCAGCTCCCCACATCCTT...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610595.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTGCACATTGCCCAGGATaGCCAGCACAGCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPAHCPG*PAQQWP
Trigger: TGGCCATTGCTGTGCTGGCCATCCTGGGCAATGTGC...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGACACCATGTAGTTCATaGGGACCACATCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GSCDSRRGLPEAPRAEALTPCSS*GPHPQR
Trigger: TCTTTGAGGATGTGGTCCCCATGAACTACATGGTGT...CAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGGATTCACAACCGAATTaGTGTGGGAGAGGACGATGG +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGDSQPN*CGRGRW
Trigger: CCATCGTCCTCTCCCACACCAATTCGGTTGTGAATC...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATAGGGGAGCACTGCCGTTaGCCCACACTCCTGGCGGGT +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIGEHCR*PTLLAG
Trigger: ACCCGCCAGGAGTGTGGGCCAACGGCAGTGCTCCCC...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGTTCCCCTGGGACTCTTaGGCACTCCCTCCACTCACC +
Preference number: 4 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWFPWDS*ALPPLT
Trigger: GGTGAGTGGAGGGAGTGCCCAAGAGTCCCAGGGGAA...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGTTCTCCCAACGTGACTaGTCAAGCCAACCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRFSQRD*SSQPER
Trigger: TCTTTCTGGTTGGCTTGACCAGTCACGTTGGGAGAA...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCACCTGGGCCCATGCTCTaGCACTGCTCTGTTACAACT +
Preference number: 4 (lower is better)
Translates to: KASHWVALRYSAHASGLPPGPML*HCSVTT
Trigger: AGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGG...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCTGGGCCCATGCTCTaGCACTGCTCTGTTACAACT +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLPGPML*HCSVTT
Trigger: AGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGG...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCAGACAAGGCCTCTCACTaGGTAGCTCTGCGCTACTCA +
Preference number: 4 (lower is better)
Translates to: KASHWVALRYSAHASGLPDKASH*VALRYS
Trigger: TGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp TCCCCTGGGACCTGGGCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCCCACAAAGTAGTTGGTaGCGTTCTGCAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SPGTWAHALALLCYNSLSPQSSW*RSAGCC
Trigger: ACAGCAACCTGCAGAACGTCACCAACTACTTTGTGG...GGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGCACAGGCAAAGAAGTTaGAGTACACCATGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: GSCDSRRGLPEAPRAEALHRQRS*STPCSS
Trigger: TGAACTACATGGTGTACTTCAACTTCTTTGCCTGTG...CAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGAATAGACACCCAGCATaGGCAGCAGGGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWNRHPA*AAGAPA
Trigger: TGCTGGTGCCCCTGCTGCTCATGCTGGGTGTCTATT...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCTCTCTTCTCCCAACGTaGCTGGTCAAGCCAACCAGA +
Preference number: 4 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCSLLPT*LVKPTR
Trigger: TCTGGTTGGCTTGACCAGTCACGTTGGGAGAAGAGA...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGACACCAGCCGCCCTGTaGAAGGACAAGCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: AHALALLCYNSLSLIPALTPAAL*KDKPET
Trigger: GGTCTCTGGCTTGTCCTTTCACAGGGCGGCTGGTGT...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610595.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATAAGCCAAGTGCAGCCCTaGTGGGGCGCTCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKISQVQP*WGALQG
Trigger: CCCTTGGAGAGCGCCCCAGCAGGGCTGCACTTGGCT...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAAGCCTTGAAAGGTTCTTaGTGCCTCAGGACGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KMLLVLWPPPGARPHSMKALKGS*CLRTWL
Trigger: CAGCCACGTCCTGAGGCAGCAAGAACCTTTCAAGGC...TTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATAGCGCTACTCAGCACATaGCAGTGGCCTGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIALLST*QWPASP
Trigger: GGGGCTGGCAGGCCACTGGCATGTGCTGAGTAGCGC...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGGCACATTGCCCAGGATaGCCAGCACAGCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWAHCPG*PAQQWP
Trigger: TGGCCATTGCTGTGCTGGCCATCCTGGGCAATGTGC...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGTGTTCCAACCTAGCATaGGAGTCAGGCCGATGGCAA +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLCSNLA*ESGRWQ
Trigger: TTGCCATCGGCCTGACTCCCATGCTAGGTTGGAACA...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCGTTCTTGCCCTCCTTTaGCTGACCGCAGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCVLALL*LTAVVP
Trigger: TGGAACAACTGCGGTCAGCCAAAGGAGGGCAAGAAC...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGGTTCTTGCCCTCCTTTaGCTGACCGCAGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLVLALL*LTAVVP
Trigger: TGGAACAACTGCGGTCAGCCAAAGGAGGGCAAGAAC...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGACACCATGTAGTTCATaGGGACCACATCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRTPCSS*GPHPQR
Trigger: TCTTTGAGGATGTGGTCCCCATGAACTACATGGTGT...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGACACCATGTAGTTCATaGGGACCACATCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAETPCSS*GPHPQR
Trigger: TCTTTGAGGATGTGGTCCCCATGAACTACATGGTGT...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATAGTGACTTGGCAGCATaGACCTCCTTCTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHSDLAA*TSFCSV
Trigger: CACACTGCAGAAGGAGGTCCATGCTGCCAAGTCACT...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGATCTTGCGGAAGGTCTaGCGGAACTCGCGGATACGG +
Preference number: 4 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWILRKV*RNSRIR
Trigger: CCGTATCCGCGAGTTCCGCCAGACCTTCCGCAAGAT...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGAGGCCTCCGCTCAGGGTaGGGAGCACTGCCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGGLRSG*GALPLA
Trigger: GGCCAACGGCAGTGCTCCCCACCCTGAGCGGAGGCC...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGTTCCCCTGGGACTCTTaGGCACTCCCTCCACTCACC +
Preference number: 4 (lower is better)
Translates to: AHALALLCYNSLSLIPALFPWDS*ALPPLT
Trigger: GGTGAGTGGAGGGAGTGCCCAAGAGTCCCAGGGGAA...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATACTCCCTTGAGCTCATaGCTAAGGAGCTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHTPLSS*LRSSTS
Trigger: AGACGTGGAGCTCCTTAGCCATGAGCTCAAGGGAGT...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGTTCTCCCAACGTGACTaGTCAAGCCAACCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGFSQRD*SSQPER
Trigger: TCTTTCTGGTTGGCTTGACCAGTCACGTTGGGAGAA...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGGCCCTCAGGGTCTCCTaGCACTCTCTCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: AHALALLCYNSLSLIPALALRVS*HSLSSP
Trigger: GGGAGAAGAGAGAGAGTGCCAGGAGACCCTGAGGGC...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGGCCCAAGCTGCTCTGTaGAGACAAGGTGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWAQAAL*RQGGAS
Trigger: GGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGC...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTCCTGGGCCCATGCTCTaGCACTGCTCTGTTACAACT +
Preference number: 4 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPPGPML*HCSVTT
Trigger: AGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGG...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCACAAAGTAGTTGGTaGCGTTCTGCAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLPQSSW*RSAGCC
Trigger: ACAGCAACCTGCAGAACGTCACCAACTACTTTGTGG...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATAGGACGAAGCAGGCAATaGAGAGGCAGCCGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIGRSRQ*RGSRGR
Trigger: CCTGCCACGGCTGCCTCTTCATTGCCTGCTTCGTCC...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGCACAGGCAAAGAAGTTaGAGTACACCATGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAEHRQRS*STPCSS
Trigger: TGAACTACATGGTGTACTTCAACTTCTTTGCCTGTG...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGCACAATGATGGCCAGTaGCTTGGCAGCATGGACCTC +
Preference number: 4 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWHNDGQ*LGSMDL
Trigger: GAGGTCCATGCTGCCAAGTCACTGGCCATCATTGTG...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGAGCACACCAGCACATTaGCCAGGATGGCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: AHALALLCYNSLSLIPALSTPAH*PGWPAQ
Trigger: CTGTGCTGGCCATCCTGGGCAATGTGCTGGTGTGCT...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATAGGCTGGCTCTCCATCTaGTTCAGCTGTCGTCGCGCC +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIGWLSI*FSCRRA
Trigger: GGCGCGACGACAGCTGAAGCAGATGGAGAGCCAGCC...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGGGTGGTGCTTCCAGATaGTTCTGCAGTGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AHALALLCYNSLSLIPALGGASR*FCSGGL
Trigger: CAGCCCTCCACTGCAGAAGCATCTGGAAGCACCACC...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGTGGGACCTGGGCCCATaGTCTGGCACTGCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: AHALALLCYNSLSLIPALWDLGP*SGTALL
Trigger: TAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCA...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATAGTGCTGAAAGCAGCTTaGCTGGGGGCGGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIVLKAA*LGAAPA
Trigger: AGCAGGAGCCGCCCCCAGCCAAGCTGCTTTCAGCAC...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337539.12
CDS-3UTR CCA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTTGTTCCAACCTAGCATaGGAGTCAGGCCGATGGCAA +
Preference number: 4 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPCSNLA*ESGRWQ
Trigger: TTGCCATCGGCCTGACTCCCATGCTAGGTTGGAACA...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTAGTGACTTGGCAGCATaGACCTCCTTCTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPSDLAA*TSFCSV
Trigger: CACACTGCAGAAGGAGGTCCATGCTGCCAAGTCACT...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCGATTCACAACCGAATTaGTGTGGGAGAGGACGATGG +
Preference number: 4 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCDSQPN*CGRGRW
Trigger: CCATCGTCCTCTCCCACACCAATTCGGTTGTGAATC...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGGCCCAAGCTGCTCTGTaGAGACAAGGTGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: AHALALLCYNSLSLIPALAQAAL*RQGGAS
Trigger: GGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGC...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTCCACAAAGTAGTTGGTaGCGTTCTGCAGGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPPQSSW*RSAGCC
Trigger: ACAGCAACCTGCAGAACGTCACCAACTACTTTGTGG...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCACAGGCAAAGAAGTTaGAGTACACCATGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGHRQRS*STPCSS
Trigger: TGAACTACATGGTGTACTTCAACTTCTTTGCCTGTG...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATTACGGTAGGCGTAGATaGAGGGATTCACAACCGAAT +
Preference number: 4 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHYGRRR*RDSQPN
Trigger: ATTCGGTTGTGAATCCCTTCATCTACGCCTACCGTA...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATAGGACGTGGCTGCGAATaGTCTTGCGGAAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIGRGCE*SCGRSG
Trigger: GCCAGACCTTCCGCAAGATCATTCGCAGCCACGTCC...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGGCCTTGAAAGGTTCTTaGTGCCTCAGGACGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AHALALLCYNSLSLIPALALKGS*CLRTWL
Trigger: CAGCCACGTCCTGAGGCAGCAAGAACCTTTCAAGGC...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGACAGGGTGGGGAGCACTaGCGTTGGCCCACACTCCTG +
Preference number: 4 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGQGGEH*RWPTLL
Trigger: CAGGAGTGTGGGCCAACGGCAGTGCTCCCCACCCTG...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATACAAAGATGCTGCTGGTaGTGTGGCCCCCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIQRCCW*CGPHLV
Trigger: CACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTG...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGAACAGCAGGAGAGGACTaGCTGAGGCTCCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGTAGED*LRLPGQ
Trigger: CTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGT...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGAAGCACGGACGCGGGCTaGGCCAGCTCACGGTCCATT +
Preference number: 4 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGSTDAG*ASSRSI
Trigger: AATGGACCGTGAGCTGGCCCAGCCCGCGTCCGTGCT...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TCCCCTGGGACCTGGGCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCACACCATGTAGTTCATaGGGACCACATCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SPGTWAHALALLCYNSLSTPCSS*GPHPQR
Trigger: TCTTTGAGGATGTGGTCCCCATGAACTACATGGTGT...GGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGAGTGACTTGGCAGCATaGACCTCCTTCTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWSDLAA*TSFCSV
Trigger: CACACTGCAGAAGGAGGTCCATGCTGCCAAGTCACT...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATATTCCCCTGGGACTCTTaGGCACTCCCTCCACTCACC +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIFPWDS*ALPPLT
Trigger: GGTGAGTGGAGGGAGTGCCCAAGAGTCCCAGGGGAA...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGGACAAGGCCTCTCACTaGGTAGCTCTGCGCTACTCA +
Preference number: 4 (lower is better)
Translates to: AHALALLCYNSLSLIPALDKASH*VALRYS
Trigger: TGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATACCTGGAGCTCGGATGTaGAAGGATGTGGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIPGARM*KDVGSC
Trigger: GCAGCTCCCCACATCCTTCCACATCCGAGCTCCAGG...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610595.4
ENST00000618076.3
CDS-3UTR TCA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGACAGCTTCAGGGTTCCTaGGGCACCCCCTCACACGAG +
Preference number: 4 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGQLQGS*GTPSHE
Trigger: CTCGTGTGAGGGGGTGCCTCAGGAACCCTGAAGCTG...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337539.12
CDS-3UTR TCA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGATGGCCAGCTCCACCGTaGTGTACACCGAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGWPAPP*CTPRSP
Trigger: TGGGCTCCTCGGTGTACATCACGGTGGAGCTGGCCA...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATAAATAGACACCCAGCATaGGCAGCAGGGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKINRHPA*AAGAPA
Trigger: TGCTGGTGCCCCTGCTGCTCATGCTGGGTGTCTATT...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATATGTACCGGAGCGGGATaGGGATGGCAATGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKICTGAG*GWQCSG
Trigger: ACCGCTACATTGCCATCCGCATCCCGCTCCGGTACA...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATAAAAGTAGGAACCGGCTaGCCTCAGGGTCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIKVGTG*PQGLLA
Trigger: TGCCAGGAGACCCTGAGGGCAGCCGGTTCCTACTTT...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATAGGTGGTGCTTCCAGATaGTTCTGCAGTGGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIGGASR*FCSGGL
Trigger: CAGCCCTCCACTGCAGAAGCATCTGGAAGCACCACC...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATATGGGACCTGGGCCCATaGTCTGGCACTGCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIWDLGP*SGTALL
Trigger: TAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCA...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATACCTCTGCAGGGGTTCTaGCAGCAGCATCATGGCTCA +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIPLQGF*QQHHGS
Trigger: TGAGCCATGATGCTGCTGCCAGAACCCCTGCAGAGG...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGACAGATGCTTCTGCAGTaGAGGGCTGGGCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGQMLLQ*RAGPCP
Trigger: TGGGCAGGGCCCAGCCCTCCACTGCAGAAGCATCTG...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
3UTR CAA 72 bp CATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTaGATCCCAGCTTTGTCACTCCAAGAGATGGCCCTG +
Preference number: 4 (lower is better)
Translates to: HALALLCYNSLS*IPALSLQEMAL
Trigger: CAGGGCCATCTCTTGGAGTGACAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGATCTGCAGGTTGCTGTTaGGCCACACGGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGSAGCC*ATRPST
Trigger: TGTGCTGGGCCGTGTGGCTCAACAGCAACCTGCAGA...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCACAGGCAAAGAAGTTaGAGTACACCATGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: DKASHWVALRYSAHASGLHRQRS*STPCSS
Trigger: TGAACTACATGGTGTACTTCAACTTCTTTGCCTGTG...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATACACAATGATGGCCAGTaGCTTGGCAGCATGGACCTC +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIHNDGQ*LGSMDL
Trigger: GAGGTCCATGCTGCCAAGTCACTGGCCATCATTGTG...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGACAGCTTCAGGGTTCCTaGGGCACCTCCCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGQLQGS*GTSLPG
Trigger: TCCTGGAAGGGAGGTGCCTCAGGAACCCTGAAGCTG...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611543.4
CDS-3UTR GCA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGACCTGGGAGTGGTTCTTaGCCTCCTTTGGCTGACCGC +
Preference number: 4 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGPGSGS*PPLADR
Trigger: GCGGTCAGCCAAAGGAGGGCAAGAACCACTCCCAGG...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATAGCCTTGAAAGGTTCTTaGTGCCTCAGGACGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIALKGS*CLRTWL
Trigger: CAGCCACGTCCTGAGGCAGCAAGAACCTTTCAAGGC...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGACAGGCCAGTCTGCTGTaGCCAAGCTGCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGQASLL*PSCSVE
Trigger: CTCCACAGAGCAGCTTGGGCACAGCAGACTGGCCTG...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGATGGGAGTCAGGCCGATaGCAAACGACAGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGWESGR*QTTAPS
Trigger: GCTGGGTGCTGTCGTTTGCCATCGGCCTGACTCCCA...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGATTCCCCTGGGACTCTTaGGCACTCCCTCCACTCACC +
Preference number: 4 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGFPWDS*ALPPLT
Trigger: GGTGAGTGGAGGGAGTGCCCAAGAGTCCCAGGGGAA...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATACCTGGGCCCATGCTCTaGCACTGCTCTGTTACAACT +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIPGPML*HCSVTT
Trigger: AGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGG...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGAAACCCAAGCCCTTCTTaGTGGGCCTCATGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGNPSPS*WASCCS
Trigger: GGAGCAGCATGAGGCCCAGCAAGAAGGGCTTGGGTT...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGACCTCTGCAGGGGTTCTaGCAGCAGCATCATGGCTCA +
Preference number: 4 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGPLQGF*QQHHGS
Trigger: TGAGCCATGATGCTGCTGCCAGAACCCCTGCAGAGG...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATAAGTGACTTGGCAGCATaGACCTCCTTCTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKISDLAA*TSFCSV
Trigger: CACACTGCAGAAGGAGGTCCATGCTGCCAAGTCACT...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR TCA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGATTGCCCTCCTTTGGCTaGCCGCAGTTGTTCCAACCT +
Preference number: 4 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGLPSFG*PQLFQP
Trigger: AGGTTGGAACAACTGCGGTCAGCCAAAGGAGGGCAA...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CCA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATAGATTCACAACCGAATTaGTGTGGGAGAGGACGATGG +
Preference number: 4 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIDSQPN*CGRGRW
Trigger: CCATCGTCCTCTCCCACACCAATTCGGTTGTGAATC...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGATTGAAAGGTTCTTGCTaGCTCAGGACGTGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGLKGSC*LRTWLR
Trigger: TCGCAGCCACGTCCTGAGGCAGCAAGAACCTTTCAA...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR GCA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGACCCATGCTCTGGCACTaGTCTGTTACAACTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGPMLWH*SVTTPC
Trigger: ACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGG...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS CCA 90 bp GGAGGGGGACCCGAGGCATCGGCCCGCGAGGCCCGCAGGCGATCCTaGAAGGACGATCCCGCAGGTGTCCCTGTCAGGACGAGGCCGCGA +
Preference number: 5 (lower is better)
Translates to: GGGPEASAREARRRS*KDDPAGVPVRTRPR
Trigger: TCGCGGCCTCGTCCTGACAGGGACACCTGCGGGATCGTCCTTCCAGGATCGCCTGCGGGCCTCGCGGGCCGATGCCTCGGGTCCCCCTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486108.1
CDS CCA 90 bp GGGCCTCCGCTCAGGGTGGGGAGCACTGCCGTTGGCCCACACTCCTaGCGGGTGGCCGTTGAGACGGAGGCTGACCTGCTCTCCGTCACT +
Preference number: 5 (lower is better)
Translates to: GPPLRVGSTAVGPHS*RVAVETEADLLSVT
Trigger: AGTGACGGAGAGCAGGTCAGCCTCCGTCTCAACGGCCACCCGCCAGGAGTGTGGGCCAACGGCAGTGCTCCCCACCCTGAGCGGAGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp GGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGCCTGGCGGGTGGCCGTaGAGACGGAGGCTGACCTGC +
Preference number: 5 (lower is better)
Translates to: GSCDSRRGLPEAPRAEALPGGWP*RRRLTC
Trigger: GCAGGTCAGCCTCCGTCTCAACGGCCACCCGCCAGG...CAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS GCA 90 bp TACTGCGCCCGAACCCGCTGCCTCCAGGTGCCCCTGCCAGTCAGCTaGAGTCAGGGCAGGGGCGGCGCTGCAGCTGACTGTGAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: YCARTRCLQVPLPVS*SQGRGGAAADCELP
Trigger: TGGAAGCTCACAGTCAGCTGCAGCGCCGCCCCTGCCCTGACTGCAGCTGACTGGCAGGGGCACCTGGAGGCAGCGGGTTCGGGCGCAGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000472248.5
ENST00000610595.4
ENST00000618076.3
CDS GCA 90 bp CTCTCTCTCTTCCAGGACATGAGGGATGGAGCAGGACTGGCAACCTaGCGCTCGCACGCCGGCTCCCGCTGTCTCGGCGGCCGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: LSLFQDMRDGAGLAT*RSHAGSRCLGGRWV
Trigger: GACCCAGCGGCCGCCGAGACAGCGGGAGCCGGCGTGCGAGCGGCAGGTTGCCAGTCCTGCTCCATCCCTCATGTCCTGGAAGAGAGAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486351.1
CDS-3UTR CAA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCCTGGCGGGTGGCCGTaGAGACGGAGGCTGACCTGC +
Preference number: 5 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGPGGWP*RRRLTC
Trigger: GCAGGTCAGCCTCCGTCTCAACGGCCACCCGCCAGG...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS CCA 90 bp ACCTCCTTCTGCAGTGTGGACCGTGCCCGCTCCCCCGGCAGAGGCTaGCTCTCCATCTGCTTCAGCTGTCGTCGCGCCGCCAGGAAGATC +
Preference number: 5 (lower is better)
Translates to: TSFCSVDRARSPGRG*LSICFSCRRAARKI
Trigger: GATCTTCCTGGCGGCGCGACGACAGCTGAAGCAGATGGAGAGCCAGCCTCTGCCGGGGGAGCGGGCACGGTCCACACTGCAGAAGGAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000496497.1
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS CCA 90 bp TCGGGCAGCCACCTCGTCTCTCTCTCTCTTCCAGGACATGAGGGATaGAGCAGGACTGGCAACCTGCCGCTCGCACGCCGGCTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: SGSHLVSLSLPGHEG*SRTGNLPLARRLPL
Trigger: CAGCGGGAGCCGGCGTGCGAGCGGCAGGTTGCCAGTCCTGCTCCATCCCTCATGTCCTGGAAGAGAGAGAGAGACGAGGTGGCTGCCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486351.1
CDS-3UTR CAA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGTGCTGAAAGCAGCTaGGCTGGGGGCGGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GSGARLAAGPTADPAARECAESS*AGGGSC
Trigger: GCAGGAGCCGCCCCCAGCCAAGCTGCTTTCAGCACA...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337539.12
CDS CCA 90 bp GGGTCATCTAGGCCAGGGGGCTCTGGGCACACTCCCTTGAGCTCATaGCTAAGGAGCTCCACGTCTGGGAGGCCCGTGTTCCCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: GSSRPGGSGHTPLSS*LRSSTSGRPVFPWD
Trigger: GTCCCAGGGGAACACGGGCCTCCCAGACGTGGAGCTCCTTAGCCATGAGCTCAAGGGAGTGTGCCCAGAGCCCCCTGGCCTAGATGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp GCCCTGCCCAGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCGTGACGTTCTGCAGGTaGCTGTTGAGCCACACGGCC +
Preference number: 5 (lower is better)
Translates to: ALPSKDAAGAVAPTWCKAVTFCR*LLSHTA
Trigger: GGCCGTGTGGCTCAACAGCAACCTGCAGAACGTCAC...GGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCCGGTCACCAAGCCATaGTACCGGAGCGGGATGCGG +
Preference number: 5 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGPVTKP*YRSGMR
Trigger: CCGCATCCCGCTCCGGTACAATGGCTTGGTGACCGG...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATTGGGGAGCACTGCCGTaGGCCCACACTCCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHWGALP*AHTPGG
Trigger: CCCGCCAGGAGTGTGGGCCAACGGCAGTGCTCCCCA...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS TCA 90 bp GGGTGGCCGTTGAGACGGAGGCTGACCTGCTCTCCGTCACTGCCATaGGCTGCCAAGACCCGGGCACTGGTGCCAGCTGCCTTGAAAGGT +
Preference number: 5 (lower is better)
Translates to: GWPLRRRLTCSPSLP*AAKTRALVPAALKG
Trigger: ACCTTTCAAGGCAGCTGGCACCAGTGCCCGGGTCTTGGCAGCTCATGGCAGTGACGGAGAGCAGGTCAGCCTCCGTCTCAACGGCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGGTGACGTTCTGCAGGTaGCTGTTGAGCCACACGGCC +
Preference number: 5 (lower is better)
Translates to: GSGARLAAGPTADPAAREVTFCR*LLSHTA
Trigger: GGCCGTGTGGCTCAACAGCAACCTGCAGAACGTCAC...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTCCTGGCGGGTGGCCGTaGAGACGGAGGCTGACCTGC +
Preference number: 5 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPPGGWP*RRRLTC
Trigger: GCAGGTCAGCCTCCGTCTCAACGGCCACCCGCCAGG...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS CCA 90 bp CTCTGGGCACACTCCCTTGAGCTCATGGCTAAGGAGCTCCACGTCTaGGAGGCCCGTGTTCCCCTGGGACTCTTGGGCACTCCCTCCACT +
Preference number: 5 (lower is better)
Translates to: LWAHSLELMAKELHV*EARVPLGLLGTPST
Trigger: AGTGGAGGGAGTGCCCAAGAGTCCCAGGGGAACACGGGCCTCCCAGACGTGGAGCTCCTTAGCCATGAGCTCAAGGGAGTGTGCCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGTGGCTGCGAATGATCTaGCGGAAGGTCTGGCGGAAC +
Preference number: 5 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAEWLRMI*RKVWRN
Trigger: GTTCCGCCAGACCTTCCGCAAGATCATTCGCAGCCA...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp GGCTCTGGTGCCAGGTTAGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTCTGGGCACACTCCCTaGAGCTCATGGCTAAGGAGC +
Preference number: 5 (lower is better)
Translates to: GSGARLAAGPTADPAARESGHTP*SSWLRS
Trigger: GCTCCTTAGCCATGAGCTCAAGGGAGTGTGCCCAGA...CTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS GCA 90 bp AGAGACAGGCCACTTGGCCCTCCCCGCAGCCCTGGGAGTGGTTCTTaGCCTCCTTTGGCTGACCGCAGTTGTTCCAACCTAGCATGGGAG +
Preference number: 5 (lower is better)
Translates to: RDRPLGPPRSPGSGS*PPLADRSCSNLAWE
Trigger: CTCCCATGCTAGGTTGGAACAACTGCGGTCAGCCAAAGGAGGGCAAGAACCACTCCCAGGGCTGCGGGGAGGGCCAAGTGGCCTGTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000496497.1
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS GCA 90 bp GCCAAGACCCGGGCACTGGTGCCAGCTGCCTTGAAAGGTTCTTGCTaGCTCAGGACGTGGCTGCGAATGATCTTGCGGAAGGTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: AKTRALVPAALKGSC*LRTWLRMILRKVWR
Trigger: CCGCCAGACCTTCCGCAAGATCATTCGCAGCCACGTCCTGAGGCAGCAAGAACCTTTCAAGGCAGCTGGCACCAGTGCCCGGGTCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS GCA 90 bp GCCGTTGAGACGGAGGCTGACCTGCTCTCCGTCACTGCCATGAGCTaGCAAGACCCGGGCACTGGTGCCAGCTGCCTTGAAAGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: AVETEADLLSVTAMS*QDPGTGASCLERFL
Trigger: CAAGAACCTTTCAAGGCAGCTGGCACCAGTGCCCGGGTCTTGGCAGCTCATGGCAGTGACGGAGAGCAGGTCAGCCTCCGTCTCAACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS GCA 90 bp AAGCCAGAGACCCCTGGAGCTCGGATGTGGAAGGATGTGGGGAGCTaGCTGGTCCTGTCTCCCACTGCCGCAGAGGGTAAGCCCTCTCAT +
Preference number: 5 (lower is better)
Translates to: KPETPGARMWKDVGS*LVLSPTAAEGKPSH
Trigger: ATGAGAGGGCTTACCCTCTGCGGCAGTGGGAGACAGGACCAGGCAGCTCCCCACATCCTTCCACATCCGAGCTCCAGGGGTCTCTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000436735.1
ENST00000472248.5
ENST00000610595.4
ENST00000618076.3
CDS CCA 90 bp GAAAGGACAAGCCAGAGACCCCTGGAGCTCGGATGTGGAAGGATGTaGGGAGCTGCCTGGTCCTGTCTCCCACTGCCGCAGAGGGTAAGC +
Preference number: 5 (lower is better)
Translates to: ERTSQRPLELGCGRM*GAAWSCLPLPQRVS
Trigger: GCTTACCCTCTGCGGCAGTGGGAGACAGGACCAGGCAGCTCCCCACATCCTTCCACATCCGAGCTCCAGGGGTCTCTGGCTTGTCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000436735.1
ENST00000472248.5
ENST00000610595.4
ENST00000618076.3
CDS CCA 90 bp CTAAGGGACACCAGCCGCCCTGTGAAAGGACAAGCCAGAGACCCCTaGAGCTCGGATGTGGAAGGATGTGGGGAGCTGCCTGGTCCTGTC +
Preference number: 5 (lower is better)
Translates to: LRDTSRPVKGQARDP*SSDVEGCGELPGPV
Trigger: GACAGGACCAGGCAGCTCCCCACATCCTTCCACATCCGAGCTCCAGGGGTCTCTGGCTTGTCCTTTCACAGGGCGGCTGGTGTCCCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000436735.1
ENST00000472248.5
ENST00000610595.4
ENST00000618076.3
CDS CCA 90 bp CCAGGGGTGCAGCTCCCAAGCACTTGCAGGTCACAGTGCAACTCCTaGCTTACTCAGGGCCAAGGCAGTTGCTGGGCTCCCAACCCTGAG +
Preference number: 5 (lower is better)
Translates to: PGVQLPSTCRSQCNS*LTQGQGSCWAPNPE
Trigger: CTCAGGGTTGGGAGCCCAGCAACTGCCTTGGCCCTGAGTAAGCCAGGAGTTGCACTGTGACCTGCAAGTGCTTGGGAGCTGCACCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467385.5
CDS-3UTR CAA 90 bp GAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCATGGCTGCGAATGATCTaGCGGAAGGTCTGGCGGAAC +
Preference number: 5 (lower is better)
Translates to: EVDGSCDSRRGLPEAPRAWLRMI*RKVWRN
Trigger: GTTCCGCCAGACCTTCCGCAAGATCATTCGCAGCCA...TGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp GAGAAGTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCTGGTGCCAGCTGCCTaGAAAGGTTCTTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: EKWMAAVTAGEDCLRLPGLVPAA*KGSCCL
Trigger: GAGGCAGCAAGAACCTTTCAAGGCAGCTGGCACCAG...CCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCACTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp GCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTTGATCCCAGCTTTGTGGGGAGCACTGCCGTaGGCCCACACTCCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: AHALALLCYNSLSLIPALWGALP*AHTPGG
Trigger: CCCGCCAGGAGTGTGGGCCAACGGCAGTGCTCCCCA...CAAAGCTGGGATCAAGGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS GCA 90 bp CTGAGGCACCCCAGCACTATCCATGGCTCCCTGCATTCCCTGCTCTaGGCATTGTTGTCACGGTGCCTCCCACTCTGGACTCAGGGCCAA +
Preference number: 5 (lower is better)
Translates to: LRHPSTIHGSLHSLL*ALLSRCLPLWTQGQ
Trigger: TTGGCCCTGAGTCCAGAGTGGGAGGCACCGTGACAACAATGCGCAGAGCAGGGAATGCAGGGAGCCATGGATAGTGCTGGGGTGCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464977.5
ENST00000467385.5
ENST00000472248.5
ENST00000610595.4
CDS-3UTR CAA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCAGTGACGTTCTGCAGGTaGCTGTTGAGCCACACGGCC +
Preference number: 5 (lower is better)
Translates to: KASHWVALRYSAHASGLPVTFCR*LLSHTA
Trigger: GGCCGTGTGGCTCAACAGCAACCTGCAGAACGTCAC...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp TGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGGGATTCACAACCGAATaGGTGTGGGAGAGGACGATG +
Preference number: 5 (lower is better)
Translates to: WMAAVTAGEDCLRLPGQRGFTTE*VWERTM
Trigger: CATCGTCCTCTCCCACACCAATTCGGTTGTGAATCC...CCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp GTGGATGGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGGATTCACAACCGAATaGGTGTGGGAGAGGACGATG +
Preference number: 5 (lower is better)
Translates to: VDGSCDSRRGLPEAPRAEGFTTE*VWERTM
Trigger: CATCGTCCTCTCCCACACCAATTCGGTTGTGAATCC...CTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCCATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS GCA 90 bp TCCGTCACTGCCATGAGCTGCCAAGACCCGGGCACTGGTGCCAGCTaGCTTGAAAGGTTCTTGCTGCCTCAGGACGTGGCTGCGAATGAT +
Preference number: 5 (lower is better)
Translates to: SVTAMSCQDPGTGAS*LERFLLPQDVAAND
Trigger: ATCATTCGCAGCCACGTCCTGAGGCAGCAAGAACCTTTCAAGGCAGCTGGCACCAGTGCCCGGGTCTTGGCAGCTCATGGCAGTGACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp GGCAGCTGTGACAGCAGGAGAGGACTGCCTGAGGCTCCCCGGGCAGAGGCTCTGAAGAAAGTGAAGCAGTaGATGATGTGTAGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GSCDSRRGLPEAPRAEALKKVKQ*MMCRGS
Trigger: GCTGCCCCTACACATCATCAACTGCTTCACTTTCTT...CAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCTCCTGCTGTCACAGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATTGGCTGCGAATGATCTaGCGGAAGGTCTGGCGGAAC +
Preference number: 5 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHWLRMI*RKVWRN
Trigger: GTTCCGCCAGACCTTCCGCAAGATCATTCGCAGCCA...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATCTGGTGCCAGCTGCCTaGAAAGGTTCTTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHLVPAA*KGSCCL
Trigger: GAGGCAGCAAGAACCTTTCAAGGCAGCTGGCACCAG...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATACCTGGCGGGTGGCCGTaGAGACGGAGGCTGACCTGC +
Preference number: 5 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIPGGWP*RRRLTC
Trigger: GCAGGTCAGCCTCCGTCTCAACGGCCACCCGCCAGG...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATATGGGGAGCACTGCCGTaGGCCCACACTCCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIWGALP*AHTPGG
Trigger: CCCGCCAGGAGTGTGGGCCAACGGCAGTGCTCCCCA...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCATCTGGGCACACTCCCTaGAGCTCATGGCTAAGGAGC +
Preference number: 5 (lower is better)
Translates to: KASHWVALRYSAHASGLPSGHTP*SSWLRS
Trigger: GCTCCTTAGCCATGAGCTCAAGGGAGTGTGCCCAGA...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTTCCCTGCTCTGCGCATaGTTGTCACGGTGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPSLLCA*LSRCLP
Trigger: TGGGAGGCACCGTGACAACAATGCGCAGAGCAGGGA...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610595.4
CDS CCA 90 bp GCACTGGTGCCAGCTGCCTTGAAAGGTTCTTGCTGCCTCAGGACGTaGCTGCGAATGATCTTGCGGAAGGTCTGGCGGAACTCGCGGATA +
Preference number: 5 (lower is better)
Translates to: ALVPAALKGSCCLRT*LRMILRKVWRNSRI
Trigger: TATCCGCGAGTTCCGCCAGACCTTCCGCAAGATCATTCGCAGCCACGTCCTGAGGCAGCAAGAACCTTTCAAGGCAGCTGGCACCAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp GTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGAAACATCTGCTTCCTCTGGTGCCAGCTGCCTaGAAAGGTTCTTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: VLWPPPGARPHSMKHLLPLVPAA*KGSCCL
Trigger: GAGGCAGCAAGAACCTTTCAAGGCAGCTGGCACCAG...AGGAAGCAGATGTTTCATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGCTGCTCTGCGCATTGTaGTCACGGTGCCTCCCACTC +
Preference number: 5 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWLLCAL*SRCLPL
Trigger: GAGTGGGAGGCACCGTGACAACAATGCGCAGAGCAG...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610595.4
CDS TCA 90 bp TGCCCTCGTGTGCAGGAAGCACCACCACCATGGGCCTTTTGCATGTaGCGTGGACAAGGTGGTAAGTGTTCTCCAGGCCAGCTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: CPRVQEAPPPWAFCM*RGQGGKCSPGQLSA
Trigger: TGCACTGAGCTGGCCTGGAGAACACTTACCACCTTGTCCACGTCACATGCAAAAGGCCCATGGTGGTGGTGCTTCCTGCACACGAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467385.5
CDS GCA 90 bp ATCCATGGCTCCCTGCATTCCCTGCTCTGCGCATTGTTGTCACGGTaGCTCCCACTCTGGACTCAGGGCCAAGGATCAGATGTGGTCTGT +
Preference number: 5 (lower is better)
Translates to: IHGSLHSLLCALLSR*LPLWTQGQGSDVVC
Trigger: ACAGACCACATCTGATCCTTGGCCCTGAGTCCAGAGTGGGAGGCACCGTGACAACAATGCGCAGAGCAGGGAATGCAGGGAGCCATGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464977.5
ENST00000467385.5
ENST00000472248.5
ENST00000610595.4
CDS CCA 90 bp GGTTCTTGCCCTCCTTTGGCTGACCGCAGTTGTTCCAACCTAGCATaGGAGTCAGGCCGATGGCAAACGACAGCACCCAGCAGATGGCAA +
Preference number: 5 (lower is better)
Translates to: GSCPPLADRSCSNLA*ESGRWQTTAPSRWQ
Trigger: TTGCCATCTGCTGGGTGCTGTCGTTTGCCATCGGCCTGACTCCCATGCTAGGTTGGAACAACTGCGGTCAGCCAAAGGAGGGCAAGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000496497.1
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS CCA 90 bp GTGTGGGAGAGGACGATGGCCAGGTACATGAGCCAGAGAGGGGCGTaGCTGCAGTCGGGGCAGAAGAAAGTGAAGCAGTTGATGATGTGT +
Preference number: 5 (lower is better)
Translates to: VWERTMARYMSQRGA*LQSGQKKVKQLMMC
Trigger: ACACATCATCAACTGCTTCACTTTCTTCTGCCCCGACTGCAGCCACGCCCCTCTCTGGCTCATGTACCTGGCCATCGTCCTCTCCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000496497.1
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp AGCAAAGATGCTGCTGGTGCTGTGGCCCCCACCTGGTGCAAGGCCTCACAGCATGGATTCACAACCGAATaGGTGTGGGAGAGGACGATG +
Preference number: 5 (lower is better)
Translates to: SKDAAGAVAPTWCKASQHGFTTE*VWERTM
Trigger: CATCGTCCTCTCCCACACCAATTCGGTTGTGAATCC...ATGCTGTGAGGCCTTGCACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp AAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGCCAGGATTCACAACCGAATaGGTGTGGGAGAGGACGATG +
Preference number: 5 (lower is better)
Translates to: KASHWVALRYSAHASGLPGFTTE*VWERTM
Trigger: CATCGTCCTCTCCCACACCAATTCGGTTGTGAATCC...TGGCAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp TCCCCTGGGACCTGGGCCCATGCTCTGGCACTGCTCTGTTACAACTCCCTGTCCTACAACTCCCTGTCCTaGATCCCAGCTTTGTCACTC +
Preference number: 5 (lower is better)
Translates to: SPGTWAHALALLCYNSLSYNSLS*IPALSL
Trigger: GAGTGACAAAGCTGGGATCAAGGACAGGGAGTTGTA...GGACAGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS TCA 90 bp TCTTGCGGAAGGTCTGGCGGAACTCGCGGATACGGTAGGCGTAGATaGAGGGATTCACAACCGAATTGGTGTGGGAGAGGACGATGGCCA +
Preference number: 5 (lower is better)
Translates to: SCGRSGGTRGYGRRR*RDSQPNWCGRGRWP
Trigger: TGGCCATCGTCCTCTCCCACACCAATTCGGTTGTGAATCCCTTCATCTACGCCTACCGTATCCGCGAGTTCCGCCAGACCTTCCGCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000496497.1
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp GACAAGGCCTCTCACTGGGTAGCTCTGCGCTACTCAGCACATGCCAGTGGCCTGTACAACTCCCTGTCCTaGATCCCAGCTTTGTCACTC +
Preference number: 5 (lower is better)
Translates to: DKASHWVALRYSAHASGLYNSLS*IPALSL
Trigger: GAGTGACAAAGCTGGGATCAAGGACAGGGAGTTGTA...CAGGCCACTGGCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp ATGCTGCTCCAGCCTGGGGCTCCCTTCTCTCAGTCCAAAGTAGGAACCGGCTGCTACAACTCCCTGTCCTaGATCCCAGCTTTGTCACTC +
Preference number: 5 (lower is better)
Translates to: MLLQPGAPFSQSKVGTGCYNSLS*IPALSL
Trigger: GAGTGACAAAGCTGGGATCAAGGACAGGGAGTTGTA...GCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAGGCTGGAGCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATATGGCTGCGAATGATCTaGCGGAAGGTCTGGCGGAAC +
Preference number: 5 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIWLRMI*RKVWRN
Trigger: GTTCCGCCAGACCTTCCGCAAGATCATTCGCAGCCA...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATATCTGGGCACACTCCCTaGAGCTCATGGCTAAGGAGC +
Preference number: 5 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKISGHTP*SSWLRS
Trigger: GCTCCTTAGCCATGAGCTCAAGGGAGTGTGCCCAGA...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp TGCCCAAGCTGCTCTGTGGAGACAAGGTGGTGCTTCCAGATGCTTCTGCAGTGGAAGAAAGTGAAGCAGTaGATGATGTGTAGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: CPSCSVETRWCFQMLLQWKKVKQ*MMCRGS
Trigger: GCTGCCCCTACACATCATCAACTGCTTCACTTTCTT...CCACTGCAGAAGCATCTGGAAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGACTGGTGCCAGCTGCCTaGAAAGGTTCTTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGLVPAA*KGSCCL
Trigger: GAGGCAGCAAGAACCTTTCAAGGCAGCTGGCACCAG...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp AGCAGCAGGACCGACGGCAGACCCAGCAGCCAGAGAGTGAAAGGTAATAAAATATACAACTCCCTGTCCTaGATCCCAGCTTTGTCACTC +
Preference number: 5 (lower is better)
Translates to: SSRTDGRPSSQRVKGNKIYNSLS*IPALSL
Trigger: GAGTGACAAAGCTGGGATCAAGGACAGGGAGTTGTA...TATTTTATTACCTTTCACTCTCTGGCTGCTGGGTCTGCCGTCGGTCCTGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS-3UTR CAA 90 bp CCCAACGTGACTGGTCAAGCCAACCAGAAAGATAAAGATCTCCTTCCCTTAGGAAAGAAAGTGAAGCAGTaGATGATGTGTAGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PNVTGQANQKDKDLLPLGKKVKQ*MMCRGS
Trigger: GCTGCCCCTACACATCATCAACTGCTTCACTTTCTT...TCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS CCA 72 bp CCCGAGGCATCGGCCCGCGAGGCCCGCAGGCGATCCTaGAAGGACGATCCCGCAGGTGTCCCTGTCAGGACG +
Preference number: 6 (lower is better)
Translates to: PEASAREARRRS*KDDPAGVPVRT
Trigger: CGTCCTGACAGGGACACCTGCGGGATCGTCCTTCCAGGATCGCCTGCGGGCCTCGCGGGCCGATGCCTCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486108.1
CDS GCA 72 bp CCCTCAGGAAGCGCCTCTGCGCCCCCGGTCCATCCCTaGTGGAGGAGCTCGCGAAGGTTCATGCGAGCGCGC +
Preference number: 6 (lower is better)
Translates to: PSGSASAPPVHP*WRSSRRFMRAR
Trigger: GCGCGCTCGCATGAACCTTCGCGAGCTCCTCCAGCAGGGATGGACCGGGGGCGCAGAGGCGCTTCCTGAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444262.6
ENST00000464977.5
CDS CCA 72 bp TCAGGAAGCGCCTCTGCGCCCCCGGTCCATCCCTGCTaGAGGAGCTCGCGAAGGTTCATGCGAGCGCGCGGG +
Preference number: 6 (lower is better)
Translates to: SGSASAPPVHPC*RSSRRFMRARG
Trigger: CCCGCGCGCTCGCATGAACCTTCGCGAGCTCCTCCAGCAGGGATGGACCGGGGGCGCAGAGGCGCTTCCTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464977.5
CDS CAA 72 bp CCATTGGGCCTCCGCTCAGGGTGGGGAGCACTGCCGTaGGCCCACACTCCTGGCGGGTGGCCGTTGAGACGG +
Preference number: 6 (lower is better)
Translates to: PLGLRSGWGALP*AHTPGGWPLRR
Trigger: CCGTCTCAACGGCCACCCGCCAGGAGTGTGGGCCAACGGCAGTGCTCCCCACCCTGAGCGGAGGCCCAATGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS GCA 72 bp TTCCAGGACATGAGGGATGGAGCAGGACTGGCAACCTaGCGCTCGCACGCCGGCTCCCGCTGTCTCGGCGGC +
Preference number: 6 (lower is better)
Translates to: FQDMRDGAGLAT*RSHAGSRCLGG
Trigger: GCCGCCGAGACAGCGGGAGCCGGCGTGCGAGCGGCAGGTTGCCAGTCCTGCTCCATCCCTCATGTCCTGGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486351.1
CDS CCA 72 bp CTCAGGGTGGGGAGCACTGCCGTTGGCCCACACTCCTaGCGGGTGGCCGTTGAGACGGAGGCTGACCTGCTC +
Preference number: 6 (lower is better)
Translates to: LRVGSTAVGPHS*RVAVETEADLL
Trigger: GAGCAGGTCAGCCTCCGTCTCAACGGCCACCCGCCAGGAGTGTGGGCCAACGGCAGTGCTCCCCACCCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS CCA 72 bp TGGGGAGCACTGCCGTTGGCCCACACTCCTGGCGGGTaGCCGTTGAGACGGAGGCTGACCTGCTCTCCGTCA +
Preference number: 6 (lower is better)
Translates to: WGALPLAHTPGG*PLRRRLTCSPS
Trigger: TGACGGAGAGCAGGTCAGCCTCCGTCTCAACGGCCACCCGCCAGGAGTGTGGGCCAACGGCAGTGCTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS CAA 72 bp GCACTGCCGTTGGCCCACACTCCTGGCGGGTGGCCGTaGAGACGGAGGCTGACCTGCTCTCCGTCACTGCCA +
Preference number: 6 (lower is better)
Translates to: ALPLAHTPGGWP*RRRLTCSPSLP
Trigger: TGGCAGTGACGGAGAGCAGGTCAGCCTCCGTCTCAACGGCCACCCGCCAGGAGTGTGGGCCAACGGCAGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS CAA 90 bp TGGGCCAGGGGGTCATCTAGGCCAGGGGGCTCTGGGCACACTCCCTaGAGCTCATGGCTAAGGAGCTCCACGTCTGGGAGGCCCGTGTTC +
Preference number: 6 (lower is better)
Translates to: WARGSSRPGGSGHTP*SSWLRSSTSGRPVF
Trigger: GAACACGGGCCTCCCAGACGTGGAGCTCCTTAGCCATGAGCTCAAGGGAGTGTGCCCAGAGCCCCCTGGCCTAGATGACCCCCTGGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS TCA 72 bp TTGAGACGGAGGCTGACCTGCTCTCCGTCACTGCCATaGGCTGCCAAGACCCGGGCACTGGTGCCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: LRRRLTCSPSLP*AAKTRALVPAA
Trigger: GGCAGCTGGCACCAGTGCCCGGGTCTTGGCAGCTCATGGCAGTGACGGAGAGCAGGTCAGCCTCCGTCTCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS CCA 72 bp AGCCAGAGACCCCTGGAGCTCGGATGTGGAAGGATGTaGGGAGCTGCCTGGTCCTGTCTCCCACTGCCGCAG +
Preference number: 6 (lower is better)
Translates to: SQRPLELGCGRM*GAAWSCLPLPQ
Trigger: CTGCGGCAGTGGGAGACAGGACCAGGCAGCTCCCCACATCCTTCCACATCCGAGCTCCAGGGGTCTCTGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000436735.1
ENST00000472248.5
ENST00000610595.4
ENST00000618076.3
CDS TCA 72 bp CCGAATTGGTGTGGGAGAGGACGATGGCCAGGTACATaGGCCAGAGAGGGGCGTGGCTGCAGTCGGGGCAGA +
Preference number: 6 (lower is better)
Translates to: PNWCGRGRWPGT*AREGRGCSRGR
Trigger: TCTGCCCCGACTGCAGCCACGCCCCTCTCTGGCTCATGTACCTGGCCATCGTCCTCTCCCACACCAATTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000496497.1
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS GCA 72 bp ACGGAGGCTGACCTGCTCTCCGTCACTGCCATGAGCTaGCAAGACCCGGGCACTGGTGCCAGCTGCCTTGAA +
Preference number: 6 (lower is better)
Translates to: TEADLLSVTAMS*QDPGTGASCLE
Trigger: TTCAAGGCAGCTGGCACCAGTGCCCGGGTCTTGGCAGCTCATGGCAGTGACGGAGAGCAGGTCAGCCTCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS GCA 72 bp ACCCCTGGAGCTCGGATGTGGAAGGATGTGGGGAGCTaGCTGGTCCTGTCTCCCACTGCCGCAGAGGGTAAG +
Preference number: 6 (lower is better)
Translates to: TPGARMWKDVGS*LVLSPTAAEGK
Trigger: CTTACCCTCTGCGGCAGTGGGAGACAGGACCAGGCAGCTCCCCACATCCTTCCACATCCGAGCTCCAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000436735.1
ENST00000472248.5
ENST00000610595.4
ENST00000618076.3
CDS CCA 72 bp CACCTCGTCTCTCTCTCTCTTCCAGGACATGAGGGATaGAGCAGGACTGGCAACCTGCCGCTCGCACGCCGG +
Preference number: 6 (lower is better)
Translates to: HLVSLSLPGHEG*SRTGNLPLARR
Trigger: CCGGCGTGCGAGCGGCAGGTTGCCAGTCCTGCTCCATCCCTCATGTCCTGGAAGAGAGAGAGAGACGAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486351.1
CDS CAA 90 bp CCACTTGGCCCTCCCCGCAGCCCTGGGAGTGGTTCTTGCCCTCCTTaGGCTGACCGCAGTTGTTCCAACCTAGCATGGGAGTCAGGCCGA +
Preference number: 6 (lower is better)
Translates to: PLGPPRSPGSGSCPP*ADRSCSNLAWESGR
Trigger: TCGGCCTGACTCCCATGCTAGGTTGGAACAACTGCGGTCAGCCAAAGGAGGGCAAGAACCACTCCCAGGGCTGCGGGGAGGGCCAAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000496497.1
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS CCA 72 bp CACTCCCTTGAGCTCATGGCTAAGGAGCTCCACGTCTaGGAGGCCCGTGTTCCCCTGGGACTCTTGGGCACT +
Preference number: 6 (lower is better)
Translates to: HSLELMAKELHV*EARVPLGLLGT
Trigger: AGTGCCCAAGAGTCCCAGGGGAACACGGGCCTCCCAGACGTGGAGCTCCTTAGCCATGAGCTCAAGGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337539.12
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS CCA 72 bp ACCAGCCGCCCTGTGAAAGGACAAGCCAGAGACCCCTaGAGCTCGGATGTGGAAGGATGTGGGGAGCTGCCT +
Preference number: 6 (lower is better)
Translates to: TSRPVKGQARDP*SSDVEGCGELP
Trigger: AGGCAGCTCCCCACATCCTTCCACATCCGAGCTCCAGGGGTCTCTGGCTTGTCCTTTCACAGGGCGGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000436735.1
ENST00000472248.5
ENST00000610595.4
ENST00000618076.3
CDS CCA 72 bp TGCAACTCCTGGCTTACTCAGGGCCAAGGCAGTTGCTaGGCTCCCAACCCTGAGGAGTCTCCACCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: CNSWLTQGQGSC*APNPEESPPGK
Trigger: CTTCCCAGGTGGAGACTCCTCAGGGTTGGGAGCCCAGCAACTGCCTTGGCCCTGAGTAAGCCAGGAGTTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467385.5
CDS CCA 72 bp CAGCTCCCAAGCACTTGCAGGTCACAGTGCAACTCCTaGCTTACTCAGGGCCAAGGCAGTTGCTGGGCTCCC +
Preference number: 6 (lower is better)
Translates to: QLPSTCRSQCNS*LTQGQGSCWAP
Trigger: GGGAGCCCAGCAACTGCCTTGGCCCTGAGTAAGCCAGGAGTTGCACTGTGACCTGCAAGTGCTTGGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467385.5
CDS CAA 90 bp CACCCCAGCACTATCCATGGCTCCCTGCATTCCCTGCTCTGCGCATaGTTGTCACGGTGCCTCCCACTCTGGACTCAGGGCCAAGGATCA +
Preference number: 6 (lower is better)
Translates to: HPSTIHGSLHSLLCA*LSRCLPLWTQGQGS
Trigger: TGATCCTTGGCCCTGAGTCCAGAGTGGGAGGCACCGTGACAACAATGCGCAGAGCAGGGAATGCAGGGAGCCATGGATAGTGCTGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464977.5
ENST00000467385.5
ENST00000472248.5
ENST00000610595.4
CDS GCA 72 bp CGGGCACTGGTGCCAGCTGCCTTGAAAGGTTCTTGCTaGCTCAGGACGTGGCTGCGAATGATCTTGCGGAAG +
Preference number: 6 (lower is better)
Translates to: RALVPAALKGSC*LRTWLRMILRK
Trigger: CTTCCGCAAGATCATTCGCAGCCACGTCCTGAGGCAGCAAGAACCTTTCAAGGCAGCTGGCACCAGTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS CCA 72 bp CCTCCTTTGGCTGACCGCAGTTGTTCCAACCTAGCATaGGAGTCAGGCCGATGGCAAACGACAGCACCCAGC +
Preference number: 6 (lower is better)
Translates to: PPLADRSCSNLA*ESGRWQTTAPS
Trigger: GCTGGGTGCTGTCGTTTGCCATCGGCCTGACTCCCATGCTAGGTTGGAACAACTGCGGTCAGCCAAAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000496497.1
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3
CDS CAA 72 bp ATCCATGGCTCCCTGCATTCCCTGCTCTGCGCATTGTaGTCACGGTGCCTCCCACTCTGGACTCAGGGCCAA +
Preference number: 6 (lower is better)
Translates to: IHGSLHSLLCAL*SRCLPLWTQGQ
Trigger: TTGGCCCTGAGTCCAGAGTGGGAGGCACCGTGACAACAATGCGCAGAGCAGGGAATGCAGGGAGCCATGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464977.5
ENST00000467385.5
ENST00000472248.5
ENST00000610595.4
CDS CAA 90 bp CCCAGCACTATCCATGGCTCCCTGCATTCCCTGCTCTGCGCATTGTaGTCACGGTGCCTCCCACTCTGGACTCAGGGCCAAGGATCAGAT +
Preference number: 6 (lower is better)
Translates to: PSTIHGSLHSLLCAL*SRCLPLWTQGQGSD
Trigger: ATCTGATCCTTGGCCCTGAGTCCAGAGTGGGAGGCACCGTGACAACAATGCGCAGAGCAGGGAATGCAGGGAGCCATGGATAGTGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464977.5
ENST00000467385.5
ENST00000472248.5
ENST00000610595.4
CDS GCA 72 bp TCCCTGCATTCCCTGCTCTGCGCATTGTTGTCACGGTaGCTCCCACTCTGGACTCAGGGCCAAGGATCAGAT +
Preference number: 6 (lower is better)
Translates to: SLHSLLCALLSR*LPLWTQGQGSD
Trigger: ATCTGATCCTTGGCCCTGAGTCCAGAGTGGGAGGCACCGTGACAACAATGCGCAGAGCAGGGAATGCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464977.5
ENST00000467385.5
ENST00000472248.5
ENST00000610595.4
CDS TCA 72 bp GTGCAGGAAGCACCACCACCATGGGCCTTTTGCATGTaGCGTGGACAAGGTGGTAAGTGTTCTCCAGGCCAG +
Preference number: 6 (lower is better)
Translates to: VQEAPPPWAFCM*RGQGGKCSPGQ
Trigger: CTGGCCTGGAGAACACTTACCACCTTGTCCACGTCACATGCAAAAGGCCCATGGTGGTGGTGCTTCCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467385.5
CDS GCA 72 bp TCCACCTGGGAAGGGCATTCACTACATGCCCTCGTGTaGAGGAAGCACCACCACCATGGGCCTTTTGCATGT +
Preference number: 6 (lower is better)
Translates to: STWEGHSLHALV*RKHHHHGPFAC
Trigger: ACATGCAAAAGGCCCATGGTGGTGGTGCTTCCTGCACACGAGGGCATGTAGTGAATGCCCTTCCCAGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467385.5
CDS TCA 72 bp AGGTCTGGCGGAACTCGCGGATACGGTAGGCGTAGATaGAGGGATTCACAACCGAATTGGTGTGGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: RSGGTRGYGRRR*RDSQPNWCGRG
Trigger: TCCTCTCCCACACCAATTCGGTTGTGAATCCCTTCATCTACGCCTACCGTATCCGCGAGTTCCGCCAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337539.12
ENST00000444262.6
ENST00000496497.1
ENST00000610595.4
ENST00000611543.4
ENST00000618076.3