RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADORA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000163485

Ensembl transcript IDs: ENST00000309502.7, ENST00000337894.9, ENST00000367235.1, ENST00000367236.8, ENST00000472535.1, ENST00000618295.1, ENST00000640524.1

Found 542 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTCCAGGCCCGGCAACGGGCAGGCCAGTGGAGCTGGTGGCCCAGATaGCAGGTAATTACACTCCAAGGCTCCTCCCCGGAAAGCTCAGGG +
Preference number: 1 (lower is better)
Translates to: VQARQRAGQWSWWPR*QVITLQGSSPESSG
Trigger: CCCTGAGCTTTCCGGGGAGGAGCCTTGGAGTGTAATTACCTGTCATCTGGGCCACCAGCTCCACTGGCCTGCCCGTTGCCGGGCCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR CCA 90 bp TGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTaGGCTGGTGGGAGCGGAAGGCGGGGTCTAGTCATCAGGCCTCTC +
Preference number: 1 (lower is better)
Translates to: WDSGHVRTGLRPHWM*AGGSGRRGLVIRPL
Trigger: GAGAGGCCTGATGACTAGACCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR GCA 90 bp GGTCCTGGGGCTGCACCACCAACATCTAAGACAAGCAGACTCCCCTaGCTCACCGCAGAAGCCCAAGCACCTTCTCCCAGCCCAGGTGGC +
Preference number: 1 (lower is better)
Translates to: GPGAAPPTSKTSRLP*LTAEAQAPSPSPGG
Trigger: GCCACCTGGGCTGGGAGAAGGTGCTTGGGCTTCTGCGGTGAGGCAGGGGAGTCTGCTTGTCTTAGATGTTGGTGGTGCAGCCCCAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR CCA 90 bp CGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTaGGAGCGGAAGGCGGGGTCTAGTCATCAGGCCTCTCTTCTGGGA +
Preference number: 1 (lower is better)
Translates to: RACEDWTETPLDVGW*ERKAGSSHQASLLG
Trigger: TCCCAGAAGAGAGGCCTGATGACTAGACCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR CCA 90 bp CAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTaGTGGGAGCGGAAGGCGGGGTCTAGTCATCAGGCCTCTCTTCTG +
Preference number: 1 (lower is better)
Translates to: QRACEDWTETPLDVG*WERKAGSSHQASLL
Trigger: CAGAAGAGAGGCCTGATGACTAGACCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR GCA 90 bp CTCGAACTCGCACTTGATCACGGGCTCCCCCATGCTGCCGTTGGCTaGCCAGGCCCGCTCCACCGCACTCAGATTGTTCCAGCCAAACAT +
Preference number: 1 (lower is better)
Translates to: LELALDHGLPHAAVG*PGPLHRTQIVPAKH
Trigger: ATGTTTGGCTGGAACAATCTGAGTGCGGTGGAGCGGGCCTGGGCAGCCAACGGCAGCATGGGGGAGCCCGTGATCAAGTGCGAGTTCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR CCA 90 bp GCTGGTGGGAGCGGAAGGCGGGGTCTAGTCATCAGGCCTCTCTTCTaGGAGATCCTCGTCAATGGGAGGTGCAGGCTGGCAGCGGAAATG +
Preference number: 1 (lower is better)
Translates to: AGGSGRRGLVIRPLF*EILVNGRCRLAAEM
Trigger: CATTTCCGCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCCCAGAAGAGAGGCCTGATGACTAGACCCCGCCTTCCGCTCCCACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR GCA 90 bp CCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCAGAATaGTCCCGAGTTGGCATGTCTAGTGTTCTCCTCTCCATCAGGCCC +
Preference number: 1 (lower is better)
Translates to: PYRHSLVHPVPRQAE*SRVGMSSVLLSIRP
Trigger: GGGCCTGATGGAGAGGAGAACACTAGACATGCCAACTCGGGAGCATTCTGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR CCA 90 bp TCAGGCCTCTCTTCTGGGAGATCCTCGTCAATGGGAGGTGCAGGCTaGCAGCGGAAATGGTCATTCCAAATCTTAAGGAAGGTGACGCGG +
Preference number: 1 (lower is better)
Translates to: SGLSSGRSSSMGGAG*QRKWSFQILRKVTR
Trigger: CCGCGTCACCTTCCTTAAGATTTGGAATGACCATTTCCGCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCCCAGAAGAGAGGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR CCA 90 bp CCTTGGGAGCCAGGGCACACCCAATTTCCAACAGAGGGAAGGGCTTaGAAGCAAGTCCTGGAGTTGACACTCATGTTCAGAAGGTCAACT +
Preference number: 1 (lower is better)
Translates to: PWEPGHTQFPTEGRA*KQVLELTLMFRRST
Trigger: AGTTGACCTTCTGAACATGAGTGTCAACTCCAGGACTTGCTTCCAAGCCCTTCCCTCTGTTGGAAATTGGGTGTGCCCTGGCTCCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR CCA 90 bp TCTGGGAGATCCTCGTCAATGGGAGGTGCAGGCTGGCAGCGGAAATaGTCATTCCAAATCTTAAGGAAGGTGACGCGGAACTTCTGGATG +
Preference number: 1 (lower is better)
Translates to: SGRSSSMGGAGWQRK*SFQILRKVTRNFWM
Trigger: CATCCAGAAGTTCCGCGTCACCTTCCTTAAGATTTGGAATGACCATTTCCGCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR TCA 90 bp TCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATaGTTACTGAACCTACCCTTTCTGCCTCTCCCACGTACAATCCTG +
Preference number: 1 (lower is better)
Translates to: SLPRAWSQHSSKYQK*LLNLPFLPLPRTIL
Trigger: CAGGATTGTACGTGGGAGAGGCAGAAAGGGTAGGTTCAGTAATCATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR GCA 90 bp CTAGTCATCAGGCCTCTCTTCTGGGAGATCCTCGTCAATGGGAGGTaGAGGCTGGCAGCGGAAATGGTCATTCCAAATCTTAAGGAAGGT +
Preference number: 1 (lower is better)
Translates to: LVIRPLFWEILVNGR*RLAAEMVIPNLKEG
Trigger: ACCTTCCTTAAGATTTGGAATGACCATTTCCGCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCCCAGAAGAGAGGCCTGATGACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR GCA 90 bp CCCCTGCCTCACCGCAGAAGCCCAAGCACCTTCTCCCAGCCCAGGTGGCTCCTCCCCTCCCAGGCCTCCTaGAGGGCCCAGAGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: PLPHRRSPSTFSQPRWLLPSQAS*RAQRCR
Trigger: CCTACACCTCTGGGCCCTGCAGGAGGCCTGGGAGGG...GAGGAGCCACCTGGGCTGGGAGAAGGTGCTTGGGCTTCTGCGGTGAGGCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR TCA 90 bp CCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCCACCTCGTGGCTGTTTaGGGCCAGCACCTACCGCAC +
Preference number: 2 (lower is better)
Translates to: PAPTAPSSLPRAWSQHSSHLVAV*GQHLPH
Trigger: GTGCGGTAGGTGCTGGCCTCAAACAGCCACGAGGTG...GCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR GCA 90 bp TCGTGGCTGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGCCCTCCCAGGCCTCCTaGAGGGCCCAGAGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: SWLFEASTYRTKLTPQGVPSQAS*RAQRCR
Trigger: CCTACACCTCTGGGCCCTGCAGGAGGCCTGGGAGGG...CACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR GCA 90 bp TCGTGGCTGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGTCAGAGCCTCCCCCATaGCCCCAGCCAACAGCCCAG +
Preference number: 2 (lower is better)
Translates to: SWLFEASTYRTKLTPQGVSEPPP*PQPTAQ
Trigger: CTGGGCTGTTGGCTGGGGGCATGGGGGAGGCTCTGA...CACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR GCA 90 bp GGTGGGAGCGGAAGGCGGGGTCTAGTCATCAGGCCTCTCTTCTGGGAGATCCTCTCACGGGCTCCCCCATaGTGCCGTTGGCTGCCCAGG +
Preference number: 2 (lower is better)
Translates to: GGSGRRGLVIRPLFWEILSRAPP*CRWLPR
Trigger: CCTGGGCAGCCAACGGCAGCATGGGGGAGCCCGTGA...GAGGATCTCCCAGAAGAGAGGCCTGATGACTAGACCCCGCCTTCCGCTCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR CCA 90 bp GGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCAACCCACTGGATGTGGGCTaGTGGGAGCGGAAGGCGGGG +
Preference number: 2 (lower is better)
Translates to: GTTLCGYLFRASPMPPANPLDVG*WERKAG
Trigger: CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGG...GTTGGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
3UTR-3UTR CCA 90 bp CCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCGCACCTGGTATGGCCTaGGGTCCAGAGTCCTCAGAG +
Preference number: 2 (lower is better)
Translates to: PAPTAPSSLPRAWSQHSSAPGMA*GPESSE
Trigger: CTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGC...GCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp TCGTGGCTGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGCAGGGGCTCCAGGCTTaGCAGGGCATGGGTTGGTCC +
Preference number: 2 (lower is better)
Translates to: SWLFEASTYRTKLTPQGVQGLQA*QGMGWS
Trigger: GGACCAACCCATGCCCTGCCAAGCCTGGAGCCCCTG...CACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR GCA 90 bp GCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGTCAGAGCCTCCCCCATaGCCCCAGCCAACAGCCCAG +
Preference number: 2 (lower is better)
Translates to: ACEDWTETPLDVGWWERKSEPPP*PQPTAQ
Trigger: CTGGGCTGTTGGCTGGGGGCATGGGGGAGGCTCTGA...CTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
3UTR-3UTR GCA 90 bp ACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATACCCTCCCAGGCCTCCTaGAGGGCCCAGAGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: TYRTKLTPQGVEPALQQIPSQAS*RAQRCR
Trigger: CCTACACCTCTGGGCCCTGCAGGAGGCCTGGGAGGG...TATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR GCA 90 bp CCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCACAAGCAGACTCCCCTaGCTCACCGCAGAAGCCCAA +
Preference number: 2 (lower is better)
Translates to: PAPTAPSSLPRAWSQHSSTSRLP*LTAEAQ
Trigger: TTGGGCTTCTGCGGTGAGGCAGGGGAGTCTGCTTGT...GCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp ACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATACCACTGGATGTGGGCTaGTGGGAGCGGAAGGCGGGG +
Preference number: 2 (lower is better)
Translates to: TYRTKLTPQGVEPALQQIPLDVG*WERKAG
Trigger: CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGG...TATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp AGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGGTGGCTCAGGGAGACCCCTaGGACAGCGGGCATGTGAGG +
Preference number: 2 (lower is better)
Translates to: RAGTLAPGMAWGPESSEVAQGDP*DSGHVR
Trigger: CCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGC...CACCTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp GGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCAACGCTCAGGGAGACCCCTaGGACAGCGGGCATGTGAGG +
Preference number: 2 (lower is better)
Translates to: GTTLCGYLFRASPMPPANAQGDP*DSGHVR
Trigger: CCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGC...GTTGGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
3UTR CAA 90 bp ACCTTCTCGAACTCGCACTTGATCACGGGCTCCCCCATGCTGCCGTaGGCTGCCCAGGCCCGCTCCACCGCACTCAGATTGTTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: TFSNSHLITGSPMLP*AAQARSTALRLFQP
Trigger: TGGCTGGAACAATCTGAGTGCGGTGGAGCGGGCCTGGGCAGCCAACGGCAGCATGGGGGAGCCCGTGATCAAGTGCGAGTTCGAGAAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR TCA 90 bp TCGTGGCTGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGGAACGGAGGCTCCTTaGTTCCTGCCCCTTAGCTGC +
Preference number: 2 (lower is better)
Translates to: SWLFEASTYRTKLTPQGVGTEAP*FLPLSC
Trigger: GCAGCTAAGGGGCAGGAATCAAGGAGCCTCCGTTCC...CACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR GCA 90 bp GGGAGCCAGGGCACACCCAATTTCCAACAGAGGGAAGGGCTTGGAAGCAAGTCCCCCTCCCAGGCCTCCTaGAGGGCCCAGAGGTGTAGG +
Preference number: 2 (lower is better)
Translates to: GSQGTPNFQQREGLGSKSPSQAS*RAQRCR
Trigger: CCTACACCTCTGGGCCCTGCAGGAGGCCTGGGAGGG...GGACTTGCTTCCAAGCCCTTCCCTCTGTTGGAAATTGGGTGTGCCCTGGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR GCA 90 bp GCGGAAGGCATAGACAATGGGGTTCATGGCCGAGTTGCCGTGCGTGAGGAAGATCATGCTGCCGTTGGCTaGCCAGGCCCGCTCCACCGC +
Preference number: 2 (lower is better)
Translates to: AEGIDNGVHGRVAVREEDHAAVG*PGPLHR
Trigger: GCGGTGGAGCGGGCCTGGGCAGCCAACGGCAGCATG...ATCTTCCTCACGCACGGCAACTCGGCCATGAACCCCATTGTCTATGCCTTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR CCA 90 bp GAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCAGGACTGAGACCCCACTaGATGTGGGCTGGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: EGPHSVGISSEPPPCPQPGLRPH*MWAGGS
Trigger: GCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCC...TGGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
3UTR-3UTR CCA 90 bp TCGTGGCTGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGTTCTCCCAGCCCAGGTaGCTCCTCTGCAGTCTCAGC +
Preference number: 2 (lower is better)
Translates to: SWLFEASTYRTKLTPQGVFSQPR*LLCSLS
Trigger: GCTGAGACTGCAGAGGAGCCACCTGGGCTGGGAGAA...CACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp GGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCCCAGGGCCCGGTGAGTaGGGAGGTGCATGTCTTTTG +
Preference number: 2 (lower is better)
Translates to: GGTTLCGYLFRASPMPPAPGPGE*GGACLL
Trigger: CAAAAGACATGCACCTCCCCACTCACCGGGCCCTGG...GGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR GCA 90 bp TCAACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCATCAGAGCCTCCCCCATaGCCCCAGCCAACAGCCCAG +
Preference number: 2 (lower is better)
Translates to: STLSPYRHSLVHPVPRQASEPPP*PQPTAQ
Trigger: CTGGGCTGTTGGCTGGGGGCATGGGGGAGGCTCTGA...TGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR GCA 90 bp TCGTGGCTGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGACAAGCAGACTCCCCTaGCTCACCGCAGAAGCCCAA +
Preference number: 2 (lower is better)
Translates to: SWLFEASTYRTKLTPQGVTSRLP*LTAEAQ
Trigger: TTGGGCTTCTGCGGTGAGGCAGGGGAGTCTGCTTGT...CACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp TGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCCTTGCTCAGGGAGACCCCTaGGACAGCGGGCATGTGAGG +
Preference number: 2 (lower is better)
Translates to: WGLRTLLPLDTWSLRRTLAQGDP*DSGHVR
Trigger: CCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGC...AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp AGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGGTGGCTCTGGACTGCTCATaGGATGGTCAGGCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: RAGTLAPGMAWGPESSEVALDCS*DGQAGG
Trigger: CCCACCTGCCTGACCATCCCATGAGCAGTCCAGAGC...CACCTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp CAGGGGCTCCAGGCTTGGCAGGGCATGGGTTGGTCCTTCCCCAGATCCCTAAAGTCACTCCCCAGGGCGTaGAGCCAGCACTCCAGCAAA +
Preference number: 2 (lower is better)
Translates to: QGLQAWQGMGWSFPRSLKSLPRA*SQHSSK
Trigger: TTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGA...CTTTAGGGATCTGGGGAAGGACCAACCCATGCCCTGCCAAGCCTGGAGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR CCA 90 bp TGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGTGGCAGGGCATGGGTTaGTCCTTCCCCAGATCCCTA +
Preference number: 2 (lower is better)
Translates to: CLRPAPTAPSSLPRAWSQWQGMG*SFPRSL
Trigger: TAGGGATCTGGGGAAGGACCAACCCATGCCCTGCCA...CTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR TCA 90 bp CCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAGCTGGTGGCCCAGATaGCAGGTAATTACACTCCAA +
Preference number: 2 (lower is better)
Translates to: PAPTAPSSLPRAWSQHSSSWWPR*QVITLQ
Trigger: TTGGAGTGTAATTACCTGTCATCTGGGCCACCAGCT...GCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR GCA 90 bp GTGTTCTCCTCTCCATCAGGCCCAGAAGCAGCAGAGATGGGGTCACCTAGGACATCAGAGCCTCCCCCATaGCCCCAGCCAACAGCCCAG +
Preference number: 2 (lower is better)
Translates to: VFSSPSGPEAAEMGSPRTSEPPP*PQPTAQ
Trigger: CTGGGCTGTTGGCTGGGGGCATGGGGGAGGCTCTGA...TGTCCTAGGTGACCCCATCTCTGCTGCTTCTGGGCCTGATGGAGAGGAGAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR GCA 90 bp TCGTGGCTGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGCCTGAAGCTCTGGACTaGTCATGGGATGGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: SWLFEASTYRTKLTPQGVPEALD*SWDGQA
Trigger: TGCCTGACCATCCCATGAGCAGTCCAGAGCTTCAGG...CACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR GCA 90 bp GCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGCTCGTCAATGGGAGGTaGAGGCTGGCAGCGGAAATG +
Preference number: 2 (lower is better)
Translates to: ACEDWTETPLDVGWWERKLVNGR*RLAAEM
Trigger: CATTTCCGCTGCCAGCCTGCACCTCCCATTGACGAG...CTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR CCA 90 bp AGGAGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGGGATGGTCAGGCAGGTaGGGGCTCAGAACACTGTTG +
Preference number: 2 (lower is better)
Translates to: RRAGTLAPGMAWGPESSEGWSGR*GLRTLL
Trigger: CAACAGTGTTCTGAGCCCCCACCTGCCTGACCATCC...CTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp GGTGGGAGCGGAAGGCGGGGTCTAGTCATCAGGCCTCTCTTCTGGGAGATCCTCGGATGGTCAGGCAGGTaGGGGCTCAGAACACTGTTG +
Preference number: 2 (lower is better)
Translates to: GGSGRRGLVIRPLFWEILGWSGR*GLRTLL
Trigger: CAACAGTGTTCTGAGCCCCCACCTGCCTGACCATCC...GAGGATCTCCCAGAAGAGAGGCCTGATGACTAGACCCCGCCTTCCGCTCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR CCA 90 bp AGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGGTGGGATGGTCAGGCAGGTaGGGGCTCAGAACACTGTTG +
Preference number: 2 (lower is better)
Translates to: RAGTLAPGMAWGPESSEVGWSGR*GLRTLL
Trigger: CAACAGTGTTCTGAGCCCCCACCTGCCTGACCATCC...CACCTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR CAA 90 bp ACTCCCTCGTCCACCCCGTTCCCAGGCAGGCAGAATGCTCCCGAGTaGGCATGTCTAGTGTTCTCCTCTCCATCAGGCCCAGAAGCAGCA +
Preference number: 2 (lower is better)
Translates to: TPSSTPFPGRQNAPE*ACLVFSSPSGPEAA
Trigger: TGCTGCTTCTGGGCCTGATGGAGAGGAGAACACTAGACATGCCAACTCGGGAGCATTCTGCCTGCCTGGGAACGGGGTGGACGAGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR GCA 90 bp GCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGCCTGAAGCTCTGGACTaGTCATGGGATGGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: ACEDWTETPLDVGWWERKPEALD*SWDGQA
Trigger: TGCCTGACCATCCCATGAGCAGTCCAGAGCTTCAGG...CTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR GCA 90 bp AGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGGTGCCTGAAGCTCTGGACTaGTCATGGGATGGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: RAGTLAPGMAWGPESSEVPEALD*SWDGQA
Trigger: TGCCTGACCATCCCATGAGCAGTCCAGAGCTTCAGG...CACCTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR GCA 90 bp TCAGGCCTCTCTTCTGGGAGATCCTCGTCAATGGGAGGTGCAGGCTGGCAGCGGCAGAGTGTGAGGATCTaGCTCCCAGCTGCCTCGAAA +
Preference number: 2 (lower is better)
Translates to: SGLSSGRSSSMGGAGWQRQSVRI*LPAASK
Trigger: TTTCGAGGCAGCTGGGAGGCAGATCCTCACACTCTG...CCGCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCCCAGAAGAGAGGCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR CCA 90 bp TCGTGGCTGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGAGGGACCACACTCTGTaGGTATCTCTTCAGAGCCTC +
Preference number: 2 (lower is better)
Translates to: SWLFEASTYRTKLTPQGVRDHTL*VSLQSL
Trigger: GAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCT...CACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp TGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCCTTGCACCTGGTATGGCCTaGGGTCCAGAGTCCTCAGAG +
Preference number: 2 (lower is better)
Translates to: WGLRTLLPLDTWSLRRTLAPGMA*GPESSE
Trigger: CTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGC...AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp GGGAGCCAGGGCACACCCAATTTCCAACAGAGGGAAGGGCTTGGAAGCAAGTCCAGGCACCCTAGCACCTaGTATGGCCTGGGGTCCAGA +
Preference number: 2 (lower is better)
Translates to: GSQGTPNFQQREGLGSKSRHPST*YGLGSR
Trigger: TCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCT...GGACTTGCTTCCAAGCCCTTCCCTCTGTTGGAAATTGGGTGTGCCCTGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR CCA 90 bp AACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCAGATCCCACGTACAATCCTaGGCTGGCCCAGGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: NTESLQTLPRPPRSQAGRSHVQS*AGPGQG
Trigger: TCCTTGCCCTGGGCCAGCCCAGGATTGTACGTGGGA...TCTGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR TCA 90 bp GTGTTCTCCTCTCCATCAGGCCCAGAAGCAGCAGAGATGGGGTCACCTAGGACAGGAACGGAGGCTCCTTaGTTCCTGCCCCTTAGCTGC +
Preference number: 2 (lower is better)
Translates to: VFSSPSGPEAAEMGSPRTGTEAP*FLPLSC
Trigger: GCAGCTAAGGGGCAGGAATCAAGGAGCCTCCGTTCC...TGTCCTAGGTGACCCCATCTCTGCTGCTTCTGGGCCTGATGGAGAGGAGAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR TCA 90 bp TGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGAGCTTCCAAAGCCCCTaGAAACCCAGCCAGATACTA +
Preference number: 2 (lower is better)
Translates to: CLRPAPTAPSSLPRAWSQSFQSP*KPSQIL
Trigger: TAGTATCTGGCTGGGTTTTCAGGGGCTTTGGAAGCT...CTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR GCA 90 bp GGGAGCCAGGGCACACCCAATTTCCAACAGAGGGAAGGGCTTGGAAGCAAGTCCCCCAGGCAGGCAGAATaGTCCCGAGTTGGCATGTCT +
Preference number: 2 (lower is better)
Translates to: GSQGTPNFQQREGLGSKSPRQAE*SRVGMS
Trigger: AGACATGCCAACTCGGGAGCATTCTGCCTGCCTGGG...GGACTTGCTTCCAAGCCCTTCCCTCTGTTGGAAATTGGGTGTGCCCTGGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR GCA 90 bp GGGAGCCAGGGCACACCCAATTTCCAACAGAGGGAAGGGCTTGGAAGCAAGTCCAGACCCCCGGACACCTaGAACAGAGCTTCCAAAGCC +
Preference number: 2 (lower is better)
Translates to: GSQGTPNFQQREGLGSKSRPPDT*NRASKA
Trigger: GGCTTTGGAAGCTCTGTTGCAGGTGTCCGGGGGTCT...GGACTTGCTTCCAAGCCCTTCCCTCTGTTGGAAATTGGGTGTGCCCTGGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR CCA 90 bp AGAGCAGATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATGGACTGAGACCCCACTaGATGTGGGCTGGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: RADALLSLSLVLGLHHQHGLRPH*MWAGGS
Trigger: GCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCC...ATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATCTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp AGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGGTGAGGGACCACACTCTGTaGGTATCTCTTCAGAGCCTC +
Preference number: 2 (lower is better)
Translates to: RAGTLAPGMAWGPESSEVRDHTL*VSLQSL
Trigger: GAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCT...CACCTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp CAGGGGCTCCAGGCTTGGCAGGGCATGGGTTGGTCCTTCCCCAGATCCCTAAAGAGGGACCACACTCTGTaGGTATCTCTTCAGAGCCTC +
Preference number: 2 (lower is better)
Translates to: QGLQAWQGMGWSFPRSLKRDHTL*VSLQSL
Trigger: GAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCT...CTTTAGGGATCTGGGGAAGGACCAACCCATGCCCTGCCAAGCCTGGAGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR CCA 90 bp TCAACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCACCAGCCCTGAAGCTCTaGACTGCTCATGGGATGGTC +
Preference number: 2 (lower is better)
Translates to: STLSPYRHSLVHPVPRQAPALKL*TAHGMV
Trigger: GACCATCCCATGAGCAGTCCAGAGCTTCAGGGCTGG...TGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR CCA 90 bp AGCGGAAGGCGGGGTCTAGTCATCAGGCCTCTCTTCTGGGAGATCCTCGTCAATTCACTCCCCAGGGCGTaGAGCCAGCACTCCAGCAAA +
Preference number: 2 (lower is better)
Translates to: SGRRGLVIRPLFWEILVNSLPRA*SQHSSK
Trigger: TTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGA...ATTGACGAGGATCTCCCAGAAGAGAGGCCTGATGACTAGACCCCGCCTTCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR CCA 90 bp CTGAGGGCAAAGAGGAAGAGGATGAGGGCCAGCGACTTGGCGATCTTCAGCTCCCCACCATCTTGTACCTaGGGGAGAGGAGGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: LRAKRKRMRASDLAIFSSPPSCT*GRGGQS
Trigger: ACTCTGCCCTCCTCTCCCCCAGGTACAAGATGGTGG...GGAGCTGAAGATCGCCAAGTCGCTGGCCCTCATCCTCTTCCTCTTTGCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR TCA 90 bp AGCGGAAGGCGGGGTCTAGTCATCAGGCCTCTCTTCTGGGAGATCCTCGTCAATCCGAGTTGCCGTGCGTaGGGAAGATGGCAATGTAGG +
Preference number: 2 (lower is better)
Translates to: SGRRGLVIRPLFWEILVNPSCRA*GRWQCR
Trigger: CCTACATTGCCATCTTCCTCACGCACGGCAACTCGG...ATTGACGAGGATCTCCCAGAAGAGAGGCCTGATGACTAGACCCCGCCTTCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR GCA 90 bp TCAGGCCTCTCTTCTGGGAGATCCTCGTCAATGGGAGGTGCAGGCTGGCAGCGGCCGTCTCAGAGCAGATaGTCTCCTCTCCTTAAGCTT +
Preference number: 2 (lower is better)
Translates to: SGLSSGRSSSMGGAGWQRPSQSR*SPLLKL
Trigger: AAGCTTAAGGAGAGGAGAGCATCTGCTCTGAGACGG...CCGCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCCCAGAAGAGAGGCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR GCA 90 bp CCCAGCCAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCCTCTCCTCTGCCTGCTaGAGCCTGCTAAACCCACCC +
Preference number: 2 (lower is better)
Translates to: PSQILGVLRDSHDSKAFPLSSAC*SLLNPP
Trigger: GGGTGGGTTTAGCAGGCTGCAGCAGGCAGAGGAGAG...GGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR GCA 90 bp ACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGCTCTCCTCTGCCTGCTaGAGCCTGCTAAACCCACCC +
Preference number: 2 (lower is better)
Translates to: TKLTPQGVEPALQQISEMLSSAC*SLLNPP
Trigger: GGGTGGGTTTAGCAGGCTGCAGCAGGCAGAGGAGAG...CATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR GCA 90 bp GCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGAGGTGCATGTCTTTTaGTCGAGGGCTGAGTCTTCA +
Preference number: 2 (lower is better)
Translates to: ACEDWTETPLDVGWWERKEVHVF*SRAESS
Trigger: TGAAGACTCAGCCCTCGAGCAAAAGACATGCACCTC...CTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR CCA 90 bp GCGGAAGGCATAGACAATGGGGTTCATGGCCGAGTTGCCGTGCGTGAGGAAGATCGGGCATGTGAGGACTaGACTGAGACCCCACTGGAT +
Preference number: 2 (lower is better)
Translates to: AEGIDNGVHGRVAVREEDRACED*TETPLD
Trigger: ATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCG...ATCTTCCTCACGCACGGCAACTCGGCCATGAACCCCATTGTCTATGCCTTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR CCA 90 bp TGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCCTTTTGCCTCTAGACACCTaGTCCCTCCGTAGGACCCTT +
Preference number: 2 (lower is better)
Translates to: WGLRTLLPLDTWSLRRTLLPLDT*SLRRTL
Trigger: AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAA...AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp ACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGGCTCTGGACTGCTCATaGGATGGTCAGGCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: TKLTPQGVEPALQQISEMALDCS*DGQAGG
Trigger: CCCACCTGCCTGACCATCCCATGAGCAGTCCAGAGC...CATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp ACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGTTCTCCCAGCCCAGGTaGCTCCTCTGCAGTCTCAGC +
Preference number: 2 (lower is better)
Translates to: TKLTPQGVEPALQQISEMFSQPR*LLCSLS
Trigger: GCTGAGACTGCAGAGGAGCCACCTGGGCTGGGAGAA...CATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp AGAGCAGATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATTCCCACGTACAATCCTaGGCTGGCCCAGGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: RADALLSLSLVLGLHHQHSHVQS*AGPGQG
Trigger: TCCTTGCCCTGGGCCAGCCCAGGATTGTACGTGGGA...ATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATCTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR GCA 90 bp TGGCAGCGGAAATGGTCATTCCAAATCTTAAGGAAGGTGACGCGGAACTTCTGGTCAGAGCCTCCCCCATaGCCCCAGCCAACAGCCCAG +
Preference number: 2 (lower is better)
Translates to: WQRKWSFQILRKVTRNFWSEPPP*PQPTAQ
Trigger: CTGGGCTGTTGGCTGGGGGCATGGGGGAGGCTCTGA...CCAGAAGTTCCGCGTCACCTTCCTTAAGATTTGGAATGACCATTTCCGCTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR GCA 90 bp ACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATACAGAACAGGCCAGTaGATCCTCAACCTCTCTCCT +
Preference number: 2 (lower is better)
Translates to: TYRTKLTPQGVEPALQQIYRTGQ*ILNLSP
Trigger: AGGAGAGAGGTTGAGGATGCACTGGCCTGTTCTGTA...TATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp AGAGCAGATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCCAGCCCTGAAGCTCTaGACTGCTCATGGGATGGTC +
Preference number: 2 (lower is better)
Translates to: RADALLSLSLVLGLHHQHPALKL*TAHGMV
Trigger: GACCATCCCATGAGCAGTCCAGAGCTTCAGGGCTGG...ATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATCTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR GCA 90 bp AGATCCTCGTCAATGGGAGGTGCAGGCTGGCAGCGGAAATGGTCATTCCAAATCACAAGCAGACTCCCCTaGCTCACCGCAGAAGCCCAA +
Preference number: 2 (lower is better)
Translates to: RSSSMGGAGWQRKWSFQITSRLP*LTAEAQ
Trigger: TTGGGCTTCTGCGGTGAGGCAGGGGAGTCTGCTTGT...GATTTGGAATGACCATTTCCGCTGCCAGCCTGCACCTCCCATTGACGAGGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR GCA 90 bp TGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCCTTCCGTCTCAGAGCAGATaGTCTCCTCTCCTTAAGCTT +
Preference number: 2 (lower is better)
Translates to: WGLRTLLPLDTWSLRRTLPSQSR*SPLLKL
Trigger: AAGCTTAAGGAGAGGAGAGCATCTGCTCTGAGACGG...AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR GCA 90 bp AACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCAGACCGTCTCAGAGCAGATaGTCTCCTCTCCTTAAGCTT +
Preference number: 2 (lower is better)
Translates to: NTESLQTLPRPPRSQAGRPSQSR*SPLLKL
Trigger: AAGCTTAAGGAGAGGAGAGCATCTGCTCTGAGACGG...TCTGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR CCA 90 bp AGAGCAGATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATTTGCCTCTAGACACCTaGTCCCTCCGTAGGACCCTT +
Preference number: 2 (lower is better)
Translates to: RADALLSLSLVLGLHHQHLPLDT*SLRRTL
Trigger: AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAA...ATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATCTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp AGAGCAGATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCAGAGTCCTCAGAGGTaGGAACGGAGGCTCCTTGAT +
Preference number: 2 (lower is better)
Translates to: RADALLSLSLVLGLHHQHQSPQR*ERRLLD
Trigger: ATCAAGGAGCCTCCGTTCCCACCTCTGAGGACTCTG...ATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATCTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR CAA 90 bp TCTCCTTCCATCCGTCTCAGAGCAGATGCTCTCCTCTCCTTAAGCTaGGTCCTGGGGCTGCACCACCAACATCTAAGACAAGCAGACTCC +
Preference number: 2 (lower is better)
Translates to: SPSIRLRADALLSLS*VLGLHHQHLRQADS
Trigger: GGAGTCTGCTTGTCTTAGATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATCTGCTCTGAGACGGATGGAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR GCA 90 bp GATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCTAAGACCTGAAGCTCTGGACTaGTCATGGGATGGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: DALLSLSLVLGLHHQHLRPEALD*SWDGQA
Trigger: TGCCTGACCATCCCATGAGCAGTCCAGAGCTTCAGG...TCTTAGATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR GCA 90 bp CAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCCACATGGGGGGTACTCTCCTCTaGCTGCTGCAGCCTGCTAAA +
Preference number: 2 (lower is better)
Translates to: QILGVLRDSHDSKAFPHMGGTLL*LLQPAK
Trigger: TTTAGCAGGCTGCAGCAGGCAGAGGAGAGTACCCCC...CATGTGGGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR GCA 90 bp AGATCCTCGTCAATGGGAGGTGCAGGCTGGCAGCGGAAATGGTCATTCCAAATCATGGCCGAGTTGCCGTaGGTGAGGAAGATGGCAATG +
Preference number: 2 (lower is better)
Translates to: RSSSMGGAGWQRKWSFQIMAELP*VRKMAM
Trigger: CATTGCCATCTTCCTCACGCACGGCAACTCGGCCAT...GATTTGGAATGACCATTTCCGCTGCCAGCCTGCACCTCCCATTGACGAGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR CCA 90 bp ACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGAGGGACCACACTCTGTaGGTATCTCTTCAGAGCCTC +
Preference number: 2 (lower is better)
Translates to: TKLTPQGVEPALQQISEMRDHTL*VSLQSL
Trigger: GAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCT...CATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp CAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCCACATGAGAGCTACCACCTCGTaGCTGTTTGAGGCCAGCACC +
Preference number: 2 (lower is better)
Translates to: QILGVLRDSHDSKAFPHMRATTS*LFEAST
Trigger: GGTGCTGGCCTCAAACAGCCACGAGGTGGTAGCTCT...CATGTGGGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR GCA 90 bp ACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGTACAGAACAGGCCAGTaGATCCTCAACCTCTCTCCT +
Preference number: 2 (lower is better)
Translates to: TKLTPQGVEPALQQISEMYRTGQ*ILNLSP
Trigger: AGGAGAGAGGTTGAGGATGCACTGGCCTGTTCTGTA...CATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CCA 90 bp AGATCCTCGTCAATGGGAGGTGCAGGCTGGCAGCGGAAATGGTCATTCCAAATCGGAAGGCATAGACAATaGGGTTCATGGCCGAGTTGC +
Preference number: 2 (lower is better)
Translates to: RSSSMGGAGWQRKWSFQIGRHRQ*GSWPSC
Trigger: GCAACTCGGCCATGAACCCCATTGTCTATGCCTTCC...GATTTGGAATGACCATTTCCGCTGCCAGCCTGCACCTCCCATTGACGAGGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR CAA 90 bp CCCCTGCCTCACCGCAGAAGCCCAAGCACCTTCTCCCAGCCCAGGTGGCTCCTCCCCTCCGTAGGACCCTaGCCCTCCCAGGCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: PLPHRRSPSTFSQPRWLLPSVGP*PSQASC
Trigger: GCAGGAGGCCTGGGAGGGCAAGGGTCCTACGGAGGG...GAGGAGCCACCTGGGCTGGGAGAAGGTGCTTGGGCTTCTGCGGTGAGGCAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CAA 90 bp CCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCTCACATGGGCCTCCCTaGGGAGCCAGGGCACACCCA +
Preference number: 3 (lower is better)
Translates to: PAPTAPSSLPRAWSQHSSSHGPP*GARAHP
Trigger: TGGGTGTGCCCTGGCTCCCAAGGGAGGCCCATGTGA...GCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR CAA 90 bp CCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCGGGGTCACCACCATCTaGTACCTGGGGGAGAGGAGG +
Preference number: 3 (lower is better)
Translates to: PAPTAPSSLPRAWSQHSSGVTTI*YLGERR
Trigger: CCTCCTCTCCCCCAGGTACAAGATGGTGGTGACCCC...GCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR GCA 72 bp GCACTTGATCACGGGCTCCCCCATGCTGCCGTTGGCTaGCCAGGCCCGCTCCACCGCACTCAGATTGTTCCA +
Preference number: 3 (lower is better)
Translates to: ALDHGLPHAAVG*PGPLHRTQIVP
Trigger: TGGAACAATCTGAGTGCGGTGGAGCGGGCCTGGGCAGCCAACGGCAGCATGGGGGAGCCCGTGATCAAGTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR CCA 72 bp TCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTaGACTGAGACCCCACTGGATGTGGGCTGGTGGGAG +
Preference number: 3 (lower is better)
Translates to: SGRPLGQRACED*TETPLDVGWWE
Trigger: CTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
3UTR-3UTR CAA 90 bp TGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCCTTCCCTCCGTAGGACCCTaGCCCTCCCAGGCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: WGLRTLLPLDTWSLRRTLPSVGP*PSQASC
Trigger: GCAGGAGGCCTGGGAGGGCAAGGGTCCTACGGAGGG...AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CAA 90 bp GCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGGGGCTCAGAACACTGTaGCCTCTAGACACCTGGTCC +
Preference number: 3 (lower is better)
Translates to: ASTYRTKLTPQGVEPALQGLRTL*PLDTWS
Trigger: GGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCC...CTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR CCA 72 bp AGGTGGGGGCTCAGAACACTGTTGCCTCTAGACACCTaGTCCCTCCGTAGGACCCTTGCCCTCCCAGGCCTC +
Preference number: 3 (lower is better)
Translates to: RWGLRTLLPLDT*SLRRTLALPGL
Trigger: GAGGCCTGGGAGGGCAAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR CCA 72 bp GAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTaGGAGCGGAAGGCGGGGTCTAGTCATCAGGCCTCT +
Preference number: 3 (lower is better)
Translates to: EDWTETPLDVGW*ERKAGSSHQAS
Trigger: AGAGGCCTGATGACTAGACCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR CCA 72 bp TGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTaGTGGGAGCGGAAGGCGGGGTCTAGTCATCAGGCC +
Preference number: 3 (lower is better)
Translates to: CEDWTETPLDVG*WERKAGSSHQA
Trigger: GGCCTGATGACTAGACCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR CAA 90 bp CCCCAGGGGCGCCTACAGTCAACACTGAGTCCTTACAGACACTCCCTCGTCCACCCACCTCGTGGCTGTTaGAGGCCAGCACCTACCGCA +
Preference number: 3 (lower is better)
Translates to: PQGRLQSTLSPYRHSLVHPPRGC*RPAPTA
Trigger: TGCGGTAGGTGCTGGCCTCAAACAGCCACGAGGTGG...GTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTTGACTGTAGGCGCCCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR CAA 90 bp GCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAGAATGCTCCCGAGTaGGCATGTCTAGTGTTCTCC +
Preference number: 3 (lower is better)
Translates to: ASTYRTKLTPQGVEPALQQNAPE*ACLVFS
Trigger: GGAGAACACTAGACATGCCAACTCGGGAGCATTCTG...CTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR TCA 72 bp CGGCAACGGGCAGGCCAGTGGAGCTGGTGGCCCAGATaGCAGGTAATTACACTCCAAGGCTCCTCCCCGGAA +
Preference number: 3 (lower is better)
Translates to: RQRAGQWSWWPR*QVITLQGSSPE
Trigger: TTCCGGGGAGGAGCCTTGGAGTGTAATTACCTGTCATCTGGGCCACCAGCTCCACTGGCCTGCCCGTTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR GCA 72 bp CACTCCCTCGTCCACCCCGTTCCCAGGCAGGCAGAATaGTCCCGAGTTGGCATGTCTAGTGTTCTCCTCTCC +
Preference number: 3 (lower is better)
Translates to: HSLVHPVPRQAE*SRVGMSSVLLS
Trigger: GGAGAGGAGAACACTAGACATGCCAACTCGGGAGCATTCTGCCTGCCTGGGAACGGGGTGGACGAGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR CCA 72 bp TCAGGGCAAGAAGGAGGGCTCAGAGCTACCACCTCGTaGCTGTTTGAGGCCAGCACCTACCGCACCAAGCTC +
Preference number: 3 (lower is better)
Translates to: SGQEGGLRATTS*LFEASTYRTKL
Trigger: GAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGAGGTGGTAGCTCTGAGCCCTCCTTCTTGCCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR CCA 72 bp AGCGGAAGGCGGGGTCTAGTCATCAGGCCTCTCTTCTaGGAGATCCTCGTCAATGGGAGGTGCAGGCTGGCA +
Preference number: 3 (lower is better)
Translates to: SGRRGLVIRPLF*EILVNGRCRLA
Trigger: TGCCAGCCTGCACCTCCCATTGACGAGGATCTCCCAGAAGAGAGGCCTGATGACTAGACCCCGCCTTCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR TCA 72 bp TCTGCGGGTCGCCGGAGGAGGCCGACACCTTCTTGTTaGGCTGCTTGCGGATTAGGTAGAAGACCTCCAGGT +
Preference number: 3 (lower is better)
Translates to: SAGRRRRPTPSC*AACGLGRRPPG
Trigger: ACCTGGAGGTCTTCTACCTAATCCGCAAGCAGCTCAACAAGAAGGTGTCGGCCTCCTCCGGCGACCCGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR CAA 90 bp AGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGGTGTCCACCGCACTCAGATaGTTCCAGCCAAACATAGGG +
Preference number: 3 (lower is better)
Translates to: RAGTLAPGMAWGPESSEVSTALR*FQPNIG
Trigger: CCCTATGTTTGGCTGGAACAATCTGAGTGCGGTGGA...CACCTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR CAA 90 bp ACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGCTCCTCTCCTTAAGCTaGGTCCTGGGGCTGCACCAC +
Preference number: 3 (lower is better)
Translates to: TKLTPQGVEPALQQISEMLLSLS*VLGLHH
Trigger: GTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAG...CATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CAA 90 bp GAGGGCAAAGAGGAAGAGGATGAGGGCCAGCGACTTGGCGATCTTCAGCTCCTTTTCTCGAACTCGCACTaGATCACGGGCTCCCCCATG +
Preference number: 3 (lower is better)
Translates to: EGKEEEDEGQRLGDLQLLFSNSH*ITGSPM
Trigger: CATGGGGGAGCCCGTGATCAAGTGCGAGTTCGAGAA...AAGGAGCTGAAGATCGCCAAGTCGCTGGCCCTCATCCTCTTCCTCTTTGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR CAA 90 bp ACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGGGGCTCAGAACACTGTaGCCTCTAGACACCTGGTCC +
Preference number: 3 (lower is better)
Translates to: TKLTPQGVEPALQQISEMGLRTL*PLDTWS
Trigger: GGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCC...CATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
3UTR-3UTR CAA 90 bp GGGAGCCAGGGCACACCCAATTTCCAACAGAGGGAAGGGCTTGGAAGCAAGTCCCAGAATGCTCCCGAGTaGGCATGTCTAGTGTTCTCC +
Preference number: 3 (lower is better)
Translates to: GSQGTPNFQQREGLGSKSQNAPE*ACLVFS
Trigger: GGAGAACACTAGACATGCCAACTCGGGAGCATTCTG...GGACTTGCTTCCAAGCCCTTCCCTCTGTTGGAAATTGGGTGTGCCCTGGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR-3UTR CAA 90 bp CAGGGGCTCCAGGCTTGGCAGGGCATGGGTTGGTCCTTCCCCAGATCCCTAAAGCAGATACTAGGGGTATaGAGGGATTCACATGACAGC +
Preference number: 3 (lower is better)
Translates to: QGLQAWQGMGWSFPRSLKQILGV*RDSHDS
Trigger: GCTGTCATGTGAATCCCTCAATACCCCTAGTATCTG...CTTTAGGGATCTGGGGAAGGACCAACCCATGCCCTGCCAAGCCTGGAGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR TCA 72 bp ACCCAGCCAGATACTAGGGGTATTGAGGGATTCACATaGCAGCAAGGCCTTCCCCCACATGCTCTCAGGGGG +
Preference number: 3 (lower is better)
Translates to: TQPDTRGIEGFT*QQGLPPHALRG
Trigger: CCCCCTGAGAGCATGTGGGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTGGCTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR CCA 72 bp AGTCATCAGGCCTCTCTTCTGGGAGATCCTCGTCAATaGGAGGTGCAGGCTGGCAGCGGAAATGGTCATTCC +
Preference number: 3 (lower is better)
Translates to: SHQASLLGDPRQ*EVQAGSGNGHS
Trigger: GGAATGACCATTTCCGCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCCCAGAAGAGAGGCCTGATGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR-3UTR CAA 90 bp TGGCAGCGGAAATGGTCATTCCAAATCTTAAGGAAGGTGACGCGGAACTTCTGGGGGTTCATGGCCGAGTaGCCGTGCGTGAGGAAGATG +
Preference number: 3 (lower is better)
Translates to: WQRKWSFQILRKVTRNFWGFMAE*PCVRKM
Trigger: CATCTTCCTCACGCACGGCAACTCGGCCATGAACCC...CCAGAAGTTCCGCGTCACCTTCCTTAAGATTTGGAATGACCATTTCCGCTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR GCA 72 bp AGGCCTCTCTTCTGGGAGATCCTCGTCAATGGGAGGTaGAGGCTGGCAGCGGAAATGGTCATTCCAAATCTT +
Preference number: 3 (lower is better)
Translates to: RPLFWEILVNGR*RLAAEMVIPNL
Trigger: AAGATTTGGAATGACCATTTCCGCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCCCAGAAGAGAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR CCA 72 bp TCCTCGTCAATGGGAGGTGCAGGCTGGCAGCGGAAATaGTCATTCCAAATCTTAAGGAAGGTGACGCGGAAC +
Preference number: 3 (lower is better)
Translates to: SSSMGGAGWQRK*SFQILRKVTRN
Trigger: GTTCCGCGTCACCTTCCTTAAGATTTGGAATGACCATTTCCGCTGCCAGCCTGCACCTCCCATTGACGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR CCA 72 bp CCAGGGCACACCCAATTTCCAACAGAGGGAAGGGCTTaGAAGCAAGTCCTGGAGTTGACACTCATGTTCAGA +
Preference number: 3 (lower is better)
Translates to: PGHTQFPTEGRA*KQVLELTLMFR
Trigger: TCTGAACATGAGTGTCAACTCCAGGACTTGCTTCCAAGCCCTTCCCTCTGTTGGAAATTGGGTGTGCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR CCA 72 bp TCTTCTGGGAGATCCTCGTCAATGGGAGGTGCAGGCTaGCAGCGGAAATGGTCATTCCAAATCTTAAGGAAG +
Preference number: 3 (lower is better)
Translates to: SSGRSSSMGGAG*QRKWSFQILRK
Trigger: CTTCCTTAAGATTTGGAATGACCATTTCCGCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCCCAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
3UTR TCA 72 bp GGAGCCAGCACTCCAGCAAATATCAGAAATGATTACTaGACCTACCCTTTCTGCCTCTCCCACGTACAATCC +
Preference number: 3 (lower is better)
Translates to: GASTPANIRNDY*TYPFCLSHVQS
Trigger: GGATTGTACGTGGGAGAGGCAGAAAGGGTAGGTTCAGTAATCATTTCTGATATTTGCTGGAGTGCTGGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp GCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGGGATGGCGAGGGGGATaGCCAGGGCACCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: ASTYRTKLTPQGVEPALQGWRGG*PGHPRP
Trigger: TGGCCGTGGGTGCCCTGGTCATCCCCCTCGCCATCC...CTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp GAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGGCATGCTGCCGTTGGCTaGCCAGGCCCGCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: EDWTETPLDVGWWERKAGHAAVG*PGPLHR
Trigger: GCGGTGGAGCGGGCCTGGGCAGCCAACGGCAGCATG...CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCTCCAGCAGCCGGCTATaGCCACCGCCGCCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: AGSGRPLGQRACEDWTETSSSRL*PPPPSG
Trigger: CCCGGAGGGCGGCGGTGGCCATAGCCGGCTGCTGGA...GGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGGCCCCCATGCTGCCGTTaGCTGCCCAGGCCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: EDWTETPLDVGWWERKAGPPCCR*LPRPAP
Trigger: TGGAGCGGGCCTGGGCAGCCAACGGCAGCATGGGGG...CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR GCA 90 bp GGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACATGCTGCCGTTGGCTaGCCAGGCCCGCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: GQAQGDPWDSGHVRTGLRHAAVG*PGPLHR
Trigger: GCGGTGGAGCGGGCCTGGGCAGCCAACGGCAGCATG...TCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR GCA 90 bp CAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGGCTCCCCCATGCTaGCGTTGGCTGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QRACEDWTETPLDVGWWERAPPC*RWLPRP
Trigger: GGGCCTGGGCAGCCAACGGCAGCATGGGGGAGCCCG...CTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR GCA 90 bp GGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGCGGGCTCCCCCATGCTaGCGTTGGCTGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GDPWDSGHVRTGLRPHWMRAPPC*RWLPRP
Trigger: GGGCCTGGGCAGCCAACGGCAGCATGGGGGAGCCCG...CATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR GCA 90 bp CCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTCGGGCTCCCCCATGCTaGCGTTGGCTGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PWDSGHVRTGLRPHWMWARAPPC*RWLPRP
Trigger: GGGCCTGGGCAGCCAACGGCAGCATGGGGGAGCCCG...AGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR GCA 90 bp GAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGGTCACGGGCTCCCCCATaGTGCCGTTGGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EDWTETPLDVGWWERKAGSRAPP*CRWLPR
Trigger: CCTGGGCAGCCAACGGCAGCATGGGGGAGCCCGTGA...CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR GCA 90 bp CCCCTGCCTCACCGCAGAAGCCCAAGCACCTTCTCCCAGCCCAGGTGGCTCCTCTCACGGGCTCCCCCATaGTGCCGTTGGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PLPHRRSPSTFSQPRWLLSRAPP*CRWLPR
Trigger: CCTGGGCAGCCAACGGCAGCATGGGGGAGCCCGTGA...GAGGAGCCACCTGGGCTGGGAGAAGGTGCTTGGGCTTCTGCGGTGAGGCAGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp GGGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGCCCTCCCAGGCCTCCTaGAGGGCCCAGAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GAGSGRPLGQRACEDWTEPSQAS*RAQRCR
Trigger: CCTACACCTCTGGGCCCTGCAGGAGGCCTGGGAGGG...CTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGAGCGGTAGGGCTGGGCTaGGCTCTGGACAACGCGCGG +
Preference number: 4 (lower is better)
Translates to: GQAQGDPWDSGHVRTGLRAVGLG*ALDNAR
Trigger: CCGCGCGTTGTCCAGAGCCCAGCCCAGCCCTACCGC...TCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
CDS-3UTR CCA 90 bp GCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCCACTGGATGTGGGCTaGTGGGAGCGGAAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: ASTYRTKLTPQGVEPALQPLDVG*WERKAG
Trigger: CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGG...CTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GGGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGCCACTGGATGTGGGCTaGTGGGAGCGGAAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GAGSGRPLGQRACEDWTEPLDVG*WERKAG
Trigger: CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGG...CTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR TCA 90 bp GGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCGGATGGCGAGGGGGATaGCCAGGGCACCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: GGTTLCGYLFRASPMPPAGWRGG*PGHPRP
Trigger: TGGCCGTGGGTGCCCTGGTCATCCCCCTCGCCATCC...GGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp GCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGGGCGCAGGAGCTGAGTaGCAATCGGGCTCCGCACAC +
Preference number: 4 (lower is better)
Translates to: ASTYRTKLTPQGVEPALQGAGAE*QSGSAH
Trigger: GTGTGCGGAGCCCGATTGTCACTCAGCTCCTGCGCC...CTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS-3UTR GCA 90 bp TGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGCATGCTGCCGTTGGCTaGCCAGGCCCGCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: CEDWTETPLDVGWWERKAHAAVG*PGPLHR
Trigger: GCGGTGGAGCGGGCCTGGGCAGCCAACGGCAGCATG...CGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR GCA 90 bp GGGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGGAAGGGCCTGGTGTGTaGGCCCAGCCTCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: GAGSGRPLGQRACEDWTEEGPGV*AQPQDW
Trigger: CCAGTCCTGAGGCTGGGCGCACACACCAGGCCCTTC...CTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS-3UTR CCA 90 bp CCCCTGCCTCACCGCAGAAGCCCAAGCACCTTCTCCCAGCCCAGGTGGCTCCTCCTGGATGTGGGCTGGTaGGAGCGGAAGGCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PLPHRRSPSTFSQPRWLLLDVGW*ERKAGS
Trigger: AGACCCCGCCTTCCGCTCCCACCAGCCCACATCCAG...GAGGAGCCACCTGGGCTGGGAGAAGGTGCTTGGGCTTCTGCGGTGAGGCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGGGCTCAGGGAGACCCCTaGGACAGCGGGCATGTGAGG +
Preference number: 4 (lower is better)
Translates to: EDWTETPLDVGWWERKAGAQGDP*DSGHVR
Trigger: CCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGC...CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR TCA 90 bp GCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGGAGCTCCCGGCTGCCTaGCTGTTCTGTCCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: ASTYRTKLTPQGVEPALQELPAA*LFCPSA
Trigger: GGCACTTGGACAGAACAGTCAGGCAGCCGGGAGCTC...CTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp GAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGGTCCGGAGAGGGATCTTaGCCCGGAGGTAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: EDWTETPLDVGWWERKAGSGEGS*PGGSGP
Trigger: TGGACCGCTACCTCCGGGTCAAGATCCCTCTCCGGA...CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR GCA 90 bp GGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGAAGGCAAGCACCATCCTaGCTGCTGGCCGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: GQAQGDPWDSGHVRTGLRRQAPS*LLAGRG
Trigger: ACCCCTGCCGGCCAGCAGGCAGGATGGTGCTTGCCT...TCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
CDS-3UTR GCA 90 bp GGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCAACCATGCTGCCGTTGGCTaGCCAGGCCCGCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: GTTLCGYLFRASPMPPANHAAVG*PGPLHR
Trigger: GCGGTGGAGCGGGCCTGGGCAGCCAACGGCAGCATG...GTTGGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR GCA 90 bp GGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTCACGGGCTCCCCCATaGTGCCGTTGGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GDPWDSGHVRTGLRPHWMSRAPP*CRWLPR
Trigger: CCTGGGCAGCCAACGGCAGCATGGGGGAGCCCGTGA...CATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR GCA 90 bp GTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGTCAGAGCCTCCCCCATaGCCCCAGCCAACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: VRTGLRPHWMWAGGSGRRSEPPP*PQPTAQ
Trigger: CTGGGCTGTTGGCTGGGGGCATGGGGGAGGCTCTGA...CCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCGGCTGGGCTGGGCTCTaGACAACGCGCGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GGTTLCGYLFRASPMPPAGWAGL*TTRGSS
Trigger: TGAGCTGCCGCGCGTTGTCCAGAGCCCAGCCCAGCC...GGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
CDS-3UTR CCA 90 bp GGGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGCCTGGAAAGCTGAGATaGAGGGCGGCATGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GAGSGRPLGQRACEDWTEPGKLR*RAAWRA
Trigger: TGCCCGCCATGCCGCCCTCCATCTCAGCTTTCCAGG...CTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGAGCATCCCGCAGCGCCTaGTTCACCTTCACCGCCCAG +
Preference number: 4 (lower is better)
Translates to: GQAQGDPWDSGHVRTGLRASRSA*FTFTAQ
Trigger: CTGGGCGGTGAAGGTGAACCAGGCGCTGCGGGATGC...TCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp ACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCCAGCAGCCGGCTATaGCCACCGCCGCCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: TYRTKLTPQGVEPALQQISSSRL*PPPPSG
Trigger: CCCGGAGGGCGGCGGTGGCCATAGCCGGCTGCTGGA...TATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp CCGTTGGCTGCCCAGGCCCGCTCCACCGCACTCAGATTGTTCCAGCCAAACATATCCAGCAGCCGGCTATaGCCACCGCCGCCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: PLAAQARSTALRLFQPNISSSRL*PPPPSG
Trigger: CCCGGAGGGCGGCGGTGGCCATAGCCGGCTGCTGGA...TATGTTTGGCTGGAACAATCTGAGTGCGGTGGAGCGGGCCTGGGCAGCCAACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp CAGGGGCTCCAGGCTTGGCAGGGCATGGGTTGGTCCTTCCCCAGATCCCTAAAGCCCCCATGCTGCCGTTaGCTGCCCAGGCCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: QGLQAWQGMGWSFPRSLKPPCCR*LPRPAP
Trigger: TGGAGCGGGCCTGGGCAGCCAACGGCAGCATGGGGG...CTTTAGGGATCTGGGGAAGGACCAACCCATGCCCTGCCAAGCCTGGAGCCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp AGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGGTGCCCCCATGCTGCCGTTaGCTGCCCAGGCCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: RAGTLAPGMAWGPESSEVPPCCR*LPRPAP
Trigger: TGGAGCGGGCCTGGGCAGCCAACGGCAGCATGGGGG...CACCTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGCCCCCATGCTGCCGTTaGCTGCCCAGGCCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: ACEDWTETPLDVGWWERKPPCCR*LPRPAP
Trigger: TGGAGCGGGCCTGGGCAGCCAACGGCAGCATGGGGG...CTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp CAGAAGCAGCAGAGATGGGGTCACCTAGGACAGTCCAGGCCCGGCAACGGGCAGCCACTGGATGTGGGCTaGTGGGAGCGGAAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: QKQQRWGHLGQSRPGNGQPLDVG*WERKAG
Trigger: CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGG...CTGCCCGTTGCCGGGCCTGGACTGTCCTAGGTGACCCCATCTCTGCTGCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp CAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCCACTGGATGTGGGCTaGTGGGAGCGGAAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: QRACEDWTETPLDVGWWEPLDVG*WERKAG
Trigger: CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGG...CTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGGGGACTGAGACCCCACTaGATGTGGGCTGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: EDWTETPLDVGWWERKAGGLRPH*MWAGGS
Trigger: GCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCC...CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp CCCACCACGAAGGAGAGGATCCAGCAGCCGGCTATGGCCACCGCCGCCCTCCGGCGGGCATGTGAGGACTaGACTGAGACCCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: PTTKERIQQPAMATAALRRACED*TETPLD
Trigger: ATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCG...CCGGAGGGCGGCGGTGGCCATAGCCGGCTGCTGGATCCTCTCCTTCGTGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp GGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCAGCTCAGGGAGACCCCTaGGACAGCGGGCATGTGAGG +
Preference number: 4 (lower is better)
Translates to: GSGRPLGQRACEDWTETPAQGDP*DSGHVR
Trigger: CCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGC...TGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGGCAGAGGGATGGTAGCTaGCTGGGACTCGACTCGGGC +
Preference number: 4 (lower is better)
Translates to: EDWTETPLDVGWWERKAGQRDGS*LGLDSG
Trigger: GCCCGAGTCGAGTCCCAGCCAGCTACCATCCCTCTG...CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp GGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGAGAGCTCCCGGCTGCCTaGCTGTTCTGTCCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: GQAQGDPWDSGHVRTGLRELPAA*LFCPSA
Trigger: GGCACTTGGACAGAACAGTCAGGCAGCCGGGAGCTC...TCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp GCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGGCGGCCTGGAAAGCTaGGATGGAGGGCGGCATGGC +
Preference number: 4 (lower is better)
Translates to: ACEDWTETPLDVGWWERKGGLES*DGGRHG
Trigger: GCCATGCCGCCCTCCATCTCAGCTTTCCAGGCCGCC...CTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp CCCCTGCCTCACCGCAGAAGCCCAAGCACCTTCTCCCAGCCCAGGTGGCTCCTCCAGAGACCAGGGCGATaGGCACCTCGATGCCGATGT +
Preference number: 4 (lower is better)
Translates to: PLPHRRSPSTFSQPRWLLQRPGR*APRCRC
Trigger: ACATCGGCATCGAGGTGCTCATCGCCCTGGTCTCTG...GAGGAGCCACCTGGGCTGGGAGAAGGTGCTTGGGCTTCTGCGGTGAGGCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp CCGTTGGCTGCCCAGGCCCGCTCCACCGCACTCAGATTGTTCCAGCCAAACATAGGATGGCGAGGGGGATaGCCAGGGCACCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: PLAAQARSTALRLFQPNIGWRGG*PGHPRP
Trigger: TGGCCGTGGGTGCCCTGGTCATCCCCCTCGCCATCC...TATGTTTGGCTGGAACAATCTGAGTGCGGTGGAGCGGGCCTGGGCAGCCAACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR TCA 90 bp GCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCACCGGAGAGGGATCTTaGCCCGGAGGTAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: AGSGRPLGQRACEDWTETTGEGS*PGGSGP
Trigger: TGGACCGCTACCTCCGGGTCAAGATCCCTCTCCGGT...GGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp GGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCATCTTCCAGGGCCCGGTaGGTGGGGAGGTGCATGTCT +
Preference number: 4 (lower is better)
Translates to: GSGRPLGQRACEDWTETPSSRAR*VGRCMS
Trigger: AGACATGCACCTCCCCACTCACCGGGCCCTGGAAGA...TGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR GCA 90 bp GGGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGGCGGTCCACAGCAATTaGCAGCAGGGCCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: GAGSGRPLGQRACEDWTEAVHSN*QQGQDG
Trigger: TCCATCCTGGCCCTGCTGGCAATTGCTGTGGACCGC...CTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp TCAACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCACGGGCTCCCCCATGCTaGCGTTGGCTGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: STLSPYRHSLVHPVPRQARAPPC*RWLPRP
Trigger: GGGCCTGGGCAGCCAACGGCAGCATGGGGGAGCCCG...TGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp CAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGTCAGAGCCTCCCCCATaGCCCCAGCCAACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QRACEDWTETPLDVGWWESEPPP*PQPTAQ
Trigger: CTGGGCTGTTGGCTGGGGGCATGGGGGAGGCTCTGA...CTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR GCA 90 bp CAGAAGCAGCAGAGATGGGGTCACCTAGGACAGTCCAGGCCCGGCAACGGGCAGTCAGAGCCTCCCCCATaGCCCCAGCCAACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QKQQRWGHLGQSRPGNGQSEPPP*PQPTAQ
Trigger: CTGGGCTGTTGGCTGGGGGCATGGGGGAGGCTCTGA...CTGCCCGTTGCCGGGCCTGGACTGTCCTAGGTGACCCCATCTCTGCTGCTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp GAGCACCCTCCTCTTCCAGGGCCCGGTGAGTGGGGAGGTGCATGTCTTTTGCTCCCCTCCCAGGCCTCCTaGAGGGCCCAGAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: EHPPLPGPGEWGGACLLLPSQAS*RAQRCR
Trigger: CCTACACCTCTGGGCCCTGCAGGAGGCCTGGGAGGG...GAGCAAAAGACATGCACCTCCCCACTCACCGGGCCCTGGAAGAGGAGGGTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp TGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGGCATCCCGCAGCGCCTaGTTCACCTTCACCGCCCAG +
Preference number: 4 (lower is better)
Translates to: CLRPAPTAPSSLPRAWSQASRSA*FTFTAQ
Trigger: CTGGGCGGTGAAGGTGAACCAGGCGCTGCGGGATGC...CTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GGGGCCTCTAAGAGGAGCACCCTCCTCTTCCAGGGCCCGGTGAGTGGGGAGGTGGCCAGGATGGAGCTCTaGGTGAGGATGAGGACCGGA +
Preference number: 4 (lower is better)
Translates to: GASKRSTLLFQGPVSGEVARMEL*VRMRTG
Trigger: TCCGGTCCTCATCCTCACCCAGAGCTCCATCCTGGC...CACCTCCCCACTCACCGGGCCCTGGAAGAGGAGGGTGCTCCTCTTAGAGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp GCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGGGAGATCCTCGTCAATaGGAGGTGCAGGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ASTYRTKLTPQGVEPALQGDPRQ*EVQAGS
Trigger: GCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCC...CTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCAGGACTGAGACCCCACTaGATGTGGGCTGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GSGRPLGQRACEDWTETPGLRPH*MWAGGS
Trigger: GCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCC...TGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGAGGACTGAGACCCCACTaGATGTGGGCTGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GQAQGDPWDSGHVRTGLRGLRPH*MWAGGS
Trigger: GCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCC...TCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp TCGTGGCTGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGCTCAGGGAGACCCCTaGGACAGCGGGCATGTGAGG +
Preference number: 4 (lower is better)
Translates to: SWLFEASTYRTKLTPQGVAQGDP*DSGHVR
Trigger: CCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGC...CACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp CCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCGCTCTGGACTGCTCATaGGATGGTCAGGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PAPTAPSSLPRAWSQHSSALDCS*DGQAGG
Trigger: CCCACCTGCCTGACCATCCCATGAGCAGTCCAGAGC...GCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGGCACCTGGTATGGCCTaGGGTCCAGAGTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: ASTYRTKLTPQGVEPALQAPGMA*GPESSE
Trigger: CTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGC...CTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp CCCCTGCCTCACCGCAGAAGCCCAAGCACCTTCTCCCAGCCCAGGTGGCTCCTCAGGCACCCTAGCACCTaGTATGGCCTGGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PLPHRRSPSTFSQPRWLLRHPST*YGLGSR
Trigger: TCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCT...GAGGAGCCACCTGGGCTGGGAGAAGGTGCTTGGGCTTCTGCGGTGAGGCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GGGGCCTCTAAGAGGAGCACCCTCCTCTTCCAGGGCCCGGTGAGTGGGGAGGTGTCACTCCCCAGGGCGTaGAGCCAGCACTCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: GASKRSTLLFQGPVSGEVSLPRA*SQHSSK
Trigger: TTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGA...CACCTCCCCACTCACCGGGCCCTGGAAGAGGAGGGTGCTCCTCTTAGAGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp CCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGGATGGTAGCTGGCTaGGACTCGACTCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: PWDSGHVRTGLRPHWMWAGMVAG*DSTRAP
Trigger: AGGCGCCCGAGTCGAGTCCCAGCCAGCTACCATCCC...AGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp CAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGAGCTCCAGGGATTCCTaGGGAAGCCAAGGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: QRACEDWTETPLDVGWWESSRDS*GSQGRP
Trigger: CGGCCGGCCTTGGCTTCCCCAGGAATCCCTGGAGCT...CTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp GGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGCCGCCAGCGACACGATaGAGCAGAAGGTGGCATCCC +
Preference number: 4 (lower is better)
Translates to: GDPWDSGHVRTGLRPHWMPPATR*SRRWHP
Trigger: GGGATGCCACCTTCTGCTTCATCGTGTCGCTGGCGG...CATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp AACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCAGAGGATGGCGAGGGGGATaGCCAGGGCACCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: NTESLQTLPRPPRSQAGRGWRGG*PGHPRP
Trigger: TGGCCGTGGGTGCCCTGGTCATCCCCCTCGCCATCC...TCTGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp GGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCGGACAGGCAACCATaGGGCAGGTGTGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: GQAQGDPWDSGHVRTGLRPDRQP*GRCGSR
Trigger: CCTACTTCCACACCTGCCTCATGGTTGCCTGTCCGG...TCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp GGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCACCGGAGAGGGATCTTaGCCCGGAGGTAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: GGTTLCGYLFRASPMPPATGEGS*PGGSGP
Trigger: TGGACCGCTACCTCCGGGTCAAGATCCCTCTCCGGT...GGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp GGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGACCGGAGAGGGATCTTaGCCCGGAGGTAGCGGTCCA +
Preference number: 4 (lower is better)
Translates to: GDPWDSGHVRTGLRPHWMTGEGS*PGGSGP
Trigger: TGGACCGCTACCTCCGGGTCAAGATCCCTCTCCGGT...CATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp GCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCTCTCGAACTCGCACTTaGTCACGGGCTCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: AGSGRPLGQRACEDWTETSRTRT*SRAPPC
Trigger: GCATGGGGGAGCCCGTGATCAAGTGCGAGTTCGAGA...GGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR TCA 90 bp GCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGGCAAAGGCAGCCAGCTaGGGGCAAAGAGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: ASTYRTKLTPQGVEPALQAKAAS*GQRGRG
Trigger: TCCTCTTCCTCTTTGCCCTCAGCTGGCTGCCTTTGC...CTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp GGGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGCCGAGTTGCCGTGCGTaGGGAAGATGGCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: GAGSGRPLGQRACEDWTEPSCRA*GRWQCR
Trigger: CCTACATTGCCATCTTCCTCACGCACGGCAACTCGG...CTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR TCA 90 bp TGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCCTTCCCCGGCGCAGGAGCTaGGTGACAATCGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: WGLRTLLPLDTWSLRRTLPRRRS*VTIGLR
Trigger: GCGGAGCCCGATTGTCACTCAGCTCCTGCGCCGGGG...AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS-3UTR GCA 90 bp GGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCAACAGGCAAGCACCATCCTaGCTGCTGGCCGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: GTTLCGYLFRASPMPPANRQAPS*LLAGRG
Trigger: ACCCCTGCCGGCCAGCAGGCAGGATGGTGCTTGCCT...GTTGGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
CDS-3UTR GCA 90 bp GGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCAGCGGTCCACAGCAATTaGCAGCAGGGCCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: GSGRPLGQRACEDWTETPAVHSN*QQGQDG
Trigger: TCCATCCTGGCCCTGCTGGCAATTGCTGTGGACCGC...TGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp GAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGGCTCGTCAATGGGAGGTaGAGGCTGGCAGCGGAAATG +
Preference number: 4 (lower is better)
Translates to: EDWTETPLDVGWWERKAGLVNGR*RLAAEM
Trigger: CATTTCCGCTGCCAGCCTGCACCTCCCATTGACGAG...CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR GCA 90 bp TCAGGCCTCTCTTCTGGGAGATCCTCGTCAATGGGAGGTGCAGGCTGGCAGCGGTCAGAGCCTCCCCCATaGCCCCAGCCAACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SGLSSGRSSSMGGAGWQRSEPPP*PQPTAQ
Trigger: CTGGGCTGTTGGCTGGGGGCATGGGGGAGGCTCTGA...CCGCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCCCAGAAGAGAGGCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR GCA 90 bp CCCCAGGGGCGCCTACAGTCAACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCTCCCAGGCCTCCTaGAGGGCCCAGAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: PQGRLQSTLSPYRHSLVHPSQAS*RAQRCR
Trigger: CCTACACCTCTGGGCCCTGCAGGAGGCCTGGGAGGG...GTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTTGACTGTAGGCGCCCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp GCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCTCTCCTCTGCCTGCTaGAGCCTGCTAAACCCACCC +
Preference number: 4 (lower is better)
Translates to: AGSGRPLGQRACEDWTETLSSAC*SLLNPP
Trigger: GGGTGGGTTTAGCAGGCTGCAGCAGGCAGAGGAGAG...GGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp GGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTCTCCTCTGCCTGCTaGAGCCTGCTAAACCCACCC +
Preference number: 4 (lower is better)
Translates to: GSGRPLGQRACEDWTETPLSSAC*SLLNPP
Trigger: GGGTGGGTTTAGCAGGCTGCAGCAGGCAGAGGAGAG...TGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp CCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAGACCCCCGGACACCTaGAACAGAGCTTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: PAPTAPSSLPRAWSQHSSRPPDT*NRASKA
Trigger: GGCTTTGGAAGCTCTGTTGCAGGTGTCCGGGGGTCT...GCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp CCCCAGGGGCGCCTACAGTCAACACTGAGTCCTTACAGACACTCCCTCGTCCACGGCTGGGCTGGGCTCTaGACAACGCGCGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PQGRLQSTLSPYRHSLVHGWAGL*TTRGSS
Trigger: TGAGCTGCCGCGCGTTGTCCAGAGCCCAGCCCAGCC...GTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTTGACTGTAGGCGCCCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309502.7
ENST00000337894.9
CDS-3UTR CCA 90 bp CAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCCTGGAAAGCTGAGATaGAGGGCGGCATGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: QRACEDWTETPLDVGWWEPGKLR*RAAWRA
Trigger: TGCCCGCCATGCCGCCCTCCATCTCAGCTTTCCAGG...CTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp CCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTCCTGGAAAGCTGAGATaGAGGGCGGCATGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PWDSGHVRTGLRPHWMWAPGKLR*RAAWRA
Trigger: TGCCCGCCATGCCGCCCTCCATCTCAGCTTTCCAGG...AGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp CAGGGGCTCCAGGCTTGGCAGGGCATGGGTTGGTCCTTCCCCAGATCCCTAAAGGCATCCCGCAGCGCCTaGTTCACCTTCACCGCCCAG +
Preference number: 4 (lower is better)
Translates to: QGLQAWQGMGWSFPRSLKASRSA*FTFTAQ
Trigger: CTGGGCGGTGAAGGTGAACCAGGCGCTGCGGGATGC...CTTTAGGGATCTGGGGAAGGACCAACCCATGCCCTGCCAAGCCTGGAGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp GTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGCCAGGATGGAGCTCTaGGTGAGGATGAGGACCGGA +
Preference number: 4 (lower is better)
Translates to: VRTGLRPHWMWAGGSGRRARMEL*VRMRTG
Trigger: TCCGGTCCTCATCCTCACCCAGAGCTCCATCCTGGC...CCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp TGGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCTGGATGTGGGCTGGTaGGAGCGGAAGGCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: WRDHTLWVSLQSLPHAPSLDVGW*ERKAGS
Trigger: AGACCCCGCCTTCCGCTCCCACCAGCCCACATCCAG...GCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp CCCCAGGGGCGCCTACAGTCAACACTGAGTCCTTACAGACACTCCCTCGTCCACCCACTGGATGTGGGCTaGTGGGAGCGGAAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PQGRLQSTLSPYRHSLVHPLDVG*WERKAG
Trigger: CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGG...GTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTTGACTGTAGGCGCCCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp TGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGGGACTGAGACCCCACTaGATGTGGGCTGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: CLRPAPTAPSSLPRAWSQGLRPH*MWAGGS
Trigger: GCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCC...CTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCGGACTGAGACCCCACTaGATGTGGGCTGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GGTTLCGYLFRASPMPPAGLRPH*MWAGGS
Trigger: GCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCC...GGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGGCGGGCATGTGAGGACTaGACTGAGACCCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: EDWTETPLDVGWWERKAGRACED*TETPLD
Trigger: ATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCG...CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCAGCTCAGGGAGACCCCTaGGACAGCGGGCATGTGAGG +
Preference number: 4 (lower is better)
Translates to: EGPHSVGISSEPPPCPQPAQGDP*DSGHVR
Trigger: CCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGC...TGGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GGGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGAGAGCTACCACCTCGTaGCTGTTTGAGGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GAGSGRPLGQRACEDWTERATTS*LFEAST
Trigger: GGTGCTGGCCTCAAACAGCCACGAGGTGGTAGCTCT...CTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp CCCCTGCCTCACCGCAGAAGCCCAAGCACCTTCTCCCAGCCCAGGTGGCTCCTCAGAGCTACCACCTCGTaGCTGTTTGAGGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: PLPHRRSPSTFSQPRWLLRATTS*LFEAST
Trigger: GGTGCTGGCCTCAAACAGCCACGAGGTGGTAGCTCT...GAGGAGCCACCTGGGCTGGGAGAAGGTGCTTGGGCTTCTGCGGTGAGGCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp AGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGGTGCAGGGGCTCCAGGCTTaGCAGGGCATGGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: RAGTLAPGMAWGPESSEVQGLQA*QGMGWS
Trigger: GGACCAACCCATGCCCTGCCAAGCCTGGAGCCCCTG...CACCTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp TGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACATGGGCCTCCCTTaGGAGCCAGGGCACACCCAA +
Preference number: 4 (lower is better)
Translates to: CLRPAPTAPSSLPRAWSQHMGLP*EPGHTQ
Trigger: TTGGGTGTGCCCTGGCTCCCAAGGGAGGCCCATGTG...CTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp CAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCACATGGGCCTCCCTTaGGAGCCAGGGCACACCCAA +
Preference number: 4 (lower is better)
Translates to: QRACEDWTETPLDVGWWEHMGLP*EPGHTQ
Trigger: TTGGGTGTGCCCTGGCTCCCAAGGGAGGCCCATGTG...CTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp GCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGAGCTCCAGGGATTCCTaGGGAAGCCAAGGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: ACEDWTETPLDVGWWERKSSRDS*GSQGRP
Trigger: CGGCCGGCCTTGGCTTCCCCAGGAATCCCTGGAGCT...CTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp TCAGGCCTCTCTTCTGGGAGATCCTCGTCAATGGGAGGTGCAGGCTGGCAGCGGCCGCCAGCGACACGATaGAGCAGAAGGTGGCATCCC +
Preference number: 4 (lower is better)
Translates to: SGLSSGRSSSMGGAGWQRPPATR*SRRWHP
Trigger: GGGATGCCACCTTCTGCTTCATCGTGTCGCTGGCGG...CCGCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCCCAGAAGAGAGGCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR TCA 90 bp TGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGCCGGACAGGCAACCATaGGGCAGGTGTGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: CEDWTETPLDVGWWERKAPDRQP*GRCGSR
Trigger: CCTACTTCCACACCTGCCTCATGGTTGCCTGTCCGG...CGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp TGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCCGGACAGGCAACCATaGGGCAGGTGTGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: CLRPAPTAPSSLPRAWSQPDRQP*GRCGSR
Trigger: CCTACTTCCACACCTGCCTCATGGTTGCCTGTCCGG...CTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp GGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTCTCGAACTCGCACTTaGTCACGGGCTCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: GDPWDSGHVRTGLRPHWMSRTRT*SRAPPC
Trigger: GCATGGGGGAGCCCGTGATCAAGTGCGAGTTCGAGA...CATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR TCA 90 bp GGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCAGCAAAGGCAGCCAGCTaGGGGCAAAGAGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: GSGRPLGQRACEDWTETPAKAAS*GQRGRG
Trigger: TCCTCTTCCTCTTTGCCCTCAGCTGGCTGCCTTTGC...TGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR TCA 90 bp GCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCGAGTTGCCGTGCGTaGGGAAGATGGCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: AGSGRPLGQRACEDWTETPSCRA*GRWQCR
Trigger: CCTACATTGCCATCTTCCTCACGCACGGCAACTCGG...GGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR TCA 90 bp GTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGCCGAGTTGCCGTGCGTaGGGAAGATGGCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: VRTGLRPHWMWAGGSGRRPSCRA*GRWQCR
Trigger: CCTACATTGCCATCTTCCTCACGCACGGCAACTCGG...CCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR TCA 90 bp CTCCTCTTCCAGGGCCCGGTGAGTGGGGAGGTGCATGTCTTTTGCTCGAGGGCTCACCTCGTGGCTGTTTaGGGCCAGCACCTACCGCAC +
Preference number: 4 (lower is better)
Translates to: LLFQGPVSGEVHVFCSRAHLVAV*GQHLPH
Trigger: GTGCGGTAGGTGCTGGCCTCAAACAGCCACGAGGTG...AGCCCTCGAGCAAAAGACATGCACCTCCCCACTCACCGGGCCCTGGAAGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR TCA 90 bp AGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGGTGCACCTCGTGGCTGTTTaGGGCCAGCACCTACCGCAC +
Preference number: 4 (lower is better)
Translates to: RAGTLAPGMAWGPESSEVHLVAV*GQHLPH
Trigger: GTGCGGTAGGTGCTGGCCTCAAACAGCCACGAGGTG...CACCTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp CAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGGGCAGAGCTCCCGGCTaGCTGACTGTTCTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: QRACEDWTETPLDVGWWEGRAPG*LTVLSK
Trigger: CTTGGACAGAACAGTCAGGCAGCCGGGAGCTCTGCC...CTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp ACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATAAAGCACCATCCTGCCTaGTGGCCGGCAGGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: TYRTKLTPQGVEPALQQIKHHPA*WPAGVP
Trigger: TGGGACCCCTGCCGGCCAGCAGGCAGGATGGTGCTT...TATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
CDS-3UTR GCA 90 bp TCAACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCATCACGGGCTCCCCCATaGTGCCGTTGGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: STLSPYRHSLVHPVPRQASRAPP*CRWLPR
Trigger: CCTGGGCAGCCAACGGCAGCATGGGGGAGCCCGTGA...TGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp GGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACTCGTCAATGGGAGGTaGAGGCTGGCAGCGGAAATG +
Preference number: 4 (lower is better)
Translates to: GQAQGDPWDSGHVRTGLRLVNGR*RLAAEM
Trigger: CATTTCCGCTGCCAGCCTGCACCTCCCATTGACGAG...TCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR GCA 90 bp GCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCCTGAAGCTCTGGACTaGTCATGGGATGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: ASTYRTKLTPQGVEPALQPEALD*SWDGQA
Trigger: TGCCTGACCATCCCATGAGCAGTCCAGAGCTTCAGG...CTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp GCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCGGGGGTACTCTCCTCTaGCTGCTGCAGCCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: AGSGRPLGQRACEDWTETGGTLL*LLQPAK
Trigger: TTTAGCAGGCTGCAGCAGGCAGAGGAGAGTACCCCC...GGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp GAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCATTGTACCATCCTGCCTaGTGGCCGGCAGGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: EGPHSVGISSEPPPCPQPLYHPA*WPAGVP
Trigger: TGGGACCCCTGCCGGCCAGCAGGCAGGATGGTACAA...TGGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000618295.1
CDS-3UTR CCA 90 bp GCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCAGGGAGAGGAGGCTCTaGGATTCAGAACAGGCACCC +
Preference number: 4 (lower is better)
Translates to: AGSGRPLGQRACEDWTETRERRL*DSEQAP
Trigger: GGGTGCCTGTTCTGAATCCCAGAGCCTCCTCTCCCT...GGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309502.7
CDS-3UTR CCA 90 bp AACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCAGAGGCTGGGCTGGGCTCTaGACAACGCGCGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: NTESLQTLPRPPRSQAGRGWAGL*TTRGSS
Trigger: TGAGCTGCCGCGCGTTGTCCAGAGCCCAGCCCAGCC...TCTGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309502.7
ENST00000337894.9
CDS-3UTR CCA 90 bp CCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGCCAGGATGGAGCTCTaGGTGAGGATGAGGACCGGA +
Preference number: 4 (lower is better)
Translates to: PWDSGHVRTGLRPHWMWAARMEL*VRMRTG
Trigger: TCCGGTCCTCATCCTCACCCAGAGCTCCATCCTGGC...AGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp TTGGGAGCCAGGGCACACCCAATTTCCAACAGAGGGAAGGGCTTGGAAGCAAGTTCCAGCAGCCGGCTATaGCCACCGCCGCCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LGARAHPISNRGKGLEASSSSRL*PPPPSG
Trigger: CCCGGAGGGCGGCGGTGGCCATAGCCGGCTGCTGGA...ACTTGCTTCCAAGCCCTTCCCTCTGTTGGAAATTGGGTGTGCCCTGGCTCCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp CCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCATGGGAGGTGCAGGCTaGCAGCGGAAATGGTCATTC +
Preference number: 4 (lower is better)
Translates to: PAPTAPSSLPRAWSQHSSMGGAG*QRKWSF
Trigger: GAATGACCATTTCCGCTGCCAGCCTGCACCTCCCAT...GCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp TGGTGGGAGCGGAAGGCGGGGTCTAGTCATCAGGCCTCTCTTCTGGGAGATCCTCTGGATGTGGGCTGGTaGGAGCGGAAGGCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: WWERKAGSSHQASLLGDPLDVGW*ERKAGS
Trigger: AGACCCCGCCTTCCGCTCCCACCAGCCCACATCCAG...AGGATCTCCCAGAAGAGAGGCCTGATGACTAGACCCCGCCTTCCGCTCCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp GGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGGCACCTGGTATGGCCTaGGGTCCAGAGTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: GDPWDSGHVRTGLRPHWMAPGMA*GPESSE
Trigger: CTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGC...CATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp CAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGTCCCACGTACAATCCTaGGCTGGCCCAGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: QRACEDWTETPLDVGWWESHVQS*AGPGQG
Trigger: TCCTTGCCCTGGGCCAGCCCAGGATTGTACGTGGGA...CTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp CAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGTCACTCCCCAGGGCGTaGAGCCAGCACTCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: QRACEDWTETPLDVGWWESLPRA*SQHSSK
Trigger: TTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGA...CTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp CCCCAGGGGCGCCTACAGTCAACACTGAGTCCTTACAGACACTCCCTCGTCCACCAGGGGCTCCAGGCTTaGCAGGGCATGGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: PQGRLQSTLSPYRHSLVHQGLQA*QGMGWS
Trigger: GGACCAACCCATGCCCTGCCAAGCCTGGAGCCCCTG...GTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTTGACTGTAGGCGCCCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp TGGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCACATGGGCCTCCCTTaGGAGCCAGGGCACACCCAA +
Preference number: 4 (lower is better)
Translates to: WRDHTLWVSLQSLPHAPSHMGLP*EPGHTQ
Trigger: TTGGGTGTGCCCTGGCTCCCAAGGGAGGCCCATGTG...GCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp GGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCACCATCTTGTACCTaGGGGAGAGGAGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GQAQGDPWDSGHVRTGLRPPSCT*GRGGQS
Trigger: ACTCTGCCCTCCTCTCCCCCAGGTACAAGATGGTGG...TCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp AACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCAGAGACTCCTGGGAGCCCTaGTCTGGCCTCCAGCGACCC +
Preference number: 4 (lower is better)
Translates to: NTESLQTLPRPPRSQAGRDSWEP*SGLQRP
Trigger: GGGTCGCTGGAGGCCAGACCAGGGCTCCCAGGAGTC...TCTGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS-3UTR TCA 90 bp ACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATAGAGCTCCCGGCTGCCTaGCTGTTCTGTCCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: TYRTKLTPQGVEPALQQIELPAA*LFCPSA
Trigger: GGCACTTGGACAGAACAGTCAGGCAGCCGGGAGCTC...TATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp AGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGGTGCAGAGACCAGGGCGATaGGCACCTCGATGCCGATGT +
Preference number: 4 (lower is better)
Translates to: RAGTLAPGMAWGPESSEVQRPGR*APRCRC
Trigger: ACATCGGCATCGAGGTGCTCATCGCCCTGGTCTCTG...CACCTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp GAGCACCCTCCTCTTCCAGGGCCCGGTGAGTGGGGAGGTGCATGTCTTTTGCTCTCTCGAACTCGCACTTaGTCACGGGCTCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: EHPPLPGPGEWGGACLLLSRTRT*SRAPPC
Trigger: GCATGGGGGAGCCCGTGATCAAGTGCGAGTTCGAGA...GAGCAAAAGACATGCACCTCCCCACTCACCGGGCCCTGGAAGAGGAGGGTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR TCA 90 bp GCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGTCTCGAACTCGCACTTaGTCACGGGCTCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: ACEDWTETPLDVGWWERKSRTRT*SRAPPC
Trigger: GCATGGGGGAGCCCGTGATCAAGTGCGAGTTCGAGA...CTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR TCA 90 bp GCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCCGACACCTTCTTGTTaGGCTGCTTGCGGATTAGGT +
Preference number: 4 (lower is better)
Translates to: ASTYRTKLTPQGVEPALQPTPSC*AACGLG
Trigger: ACCTAATCCGCAAGCAGCTCAACAAGAAGGTGTCGG...CTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp GGGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGCCGACACCTTCTTGTTaGGCTGCTTGCGGATTAGGT +
Preference number: 4 (lower is better)
Translates to: GAGSGRPLGQRACEDWTEPTPSC*AACGLG
Trigger: ACCTAATCCGCAAGCAGCTCAACAAGAAGGTGTCGG...CTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR TCA 90 bp GGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCCAAAGAGGAAGAGGATaGGGGCCAGCGACTTGGCGA +
Preference number: 4 (lower is better)
Translates to: GGTTLCGYLFRASPMPPAQRGRG*GPATWR
Trigger: TCGCCAAGTCGCTGGCCCTCATCCTCTTCCTCTTTG...GGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR TCA 90 bp CCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTCAAAGAGGAAGAGGATaGGGGCCAGCGACTTGGCGA +
Preference number: 4 (lower is better)
Translates to: PWDSGHVRTGLRPHWMWAQRGRG*GPATWR
Trigger: TCGCCAAGTCGCTGGCCCTCATCCTCTTCCTCTTTG...AGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR TCA 90 bp CAGGGGCTCCAGGCTTGGCAGGGCATGGGTTGGTCCTTCCCCAGATCCCTAAAGGGAACGGAGGCTCCTTaGTTCCTGCCCCTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: QGLQAWQGMGWSFPRSLKGTEAP*FLPLSC
Trigger: GCAGCTAAGGGGCAGGAATCAAGGAGCCTCCGTTCC...CTTTAGGGATCTGGGGAAGGACCAACCCATGCCCTGCCAAGCCTGGAGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp GGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGGGGTCCCAGAGGCAGTaGCCAAAGTTCCAGGGAACA +
Preference number: 4 (lower is better)
Translates to: GDPWDSGHVRTGLRPHWMGSQRQ*PKFQGT
Trigger: TGTTCCCTGGAACTTTGGGCACTGCCTCTGGGACCC...CATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000618295.1
CDS-3UTR GCA 90 bp TGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCCTTAAGCACCATCCTGCCTaGTGGCCGGCAGGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: WGLRTLLPLDTWSLRRTLKHHPA*WPAGVP
Trigger: TGGGACCCCTGCCGGCCAGCAGGCAGGATGGTGCTT...AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
CDS-3UTR GCA 90 bp GGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCAACGCGGTCCACAGCAATTaGCAGCAGGGCCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: GTTLCGYLFRASPMPPANAVHSN*QQGQDG
Trigger: TCCATCCTGGCCCTGCTGGCAATTGCTGTGGACCGC...GTTGGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp GGGGCCTCTAAGAGGAGCACCCTCCTCTTCCAGGGCCCGGTGAGTGGGGAGGTGCGCGGAACTTCTGGATaGGGAAGGCATAGACAATGG +
Preference number: 4 (lower is better)
Translates to: GASKRSTLLFQGPVSGEVRGTSG*GRHRQW
Trigger: CCATTGTCTATGCCTTCCGCATCCAGAAGTTCCGCG...CACCTCCCCACTCACCGGGCCCTGGAAGAGGAGGGTGCTCCTCTTAGAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR GCA 90 bp CAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCTCGTCAATGGGAGGTaGAGGCTGGCAGCGGAAATG +
Preference number: 4 (lower is better)
Translates to: QRACEDWTETPLDVGWWELVNGR*RLAAEM
Trigger: CATTTCCGCTGCCAGCCTGCACCTCCCATTGACGAG...CTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR GCA 90 bp GTGTTCTCCTCTCCATCAGGCCCAGAAGCAGCAGAGATGGGGTCACCTAGGACACCCTCCCAGGCCTCCTaGAGGGCCCAGAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: VFSSPSGPEAAEMGSPRTPSQAS*RAQRCR
Trigger: CCTACACCTCTGGGCCCTGCAGGAGGCCTGGGAGGG...TGTCCTAGGTGACCCCATCTCTGCTGCTTCTGGGCCTGATGGAGAGGAGAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp GGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGACAAGCAGACTCCCCTaGCTCACCGCAGAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: GDPWDSGHVRTGLRPHWMTSRLP*LTAEAQ
Trigger: TTGGGCTTCTGCGGTGAGGCAGGGGAGTCTGCTTGT...CATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp GCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGCTCTCCTCTGCCTGCTaGAGCCTGCTAAACCCACCC +
Preference number: 4 (lower is better)
Translates to: ACEDWTETPLDVGWWERKLSSAC*SLLNPP
Trigger: GGGTGGGTTTAGCAGGCTGCAGCAGGCAGAGGAGAG...CTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp GGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCAGACCCCCGGACACCTaGAACAGAGCTTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GGTTLCGYLFRASPMPPARPPDT*NRASKA
Trigger: GGCTTTGGAAGCTCTGTTGCAGGTGTCCGGGGGTCT...GGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp GGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGATCTCTCCCTTCTCAATaGAGGACTCCTGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GQAQGDPWDSGHVRTGLRSLPSQ*RTPGSP
Trigger: AGGGCTCCCAGGAGTCCTGCATTGAGAAGGGAGAGA...TCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS-3UTR GCA 90 bp GCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGCATCTTGTACCATCCTaGCTGCTGGCCGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: ACEDWTETPLDVGWWERKHLVPS*LLAGRG
Trigger: ACCCCTGCCGGCCAGCAGGCAGGATGGTACAAGATG...CTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618295.1
CDS-3UTR CCA 90 bp CCCCAGGGGCGCCTACAGTCAACACTGAGTCCTTACAGACACTCCCTCGTCCACCCTGGAAAGCTGAGATaGAGGGCGGCATGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PQGRLQSTLSPYRHSLVHPGKLR*RAAWRA
Trigger: TGCCCGCCATGCCGCCCTCCATCTCAGCTTTCCAGG...GTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTTGACTGTAGGCGCCCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp GAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCAGGAGATCCTCGTCAATaGGAGGTGCAGGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: EGPHSVGISSEPPPCPQPGDPRQ*EVQAGS
Trigger: GCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCC...TGGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp CAGGGGCTCCAGGCTTGGCAGGGCATGGGTTGGTCCTTCCCCAGATCCCTAAAGGGAGATCCTCGTCAATaGGAGGTGCAGGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: QGLQAWQGMGWSFPRSLKGDPRQ*EVQAGS
Trigger: GCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCC...CTTTAGGGATCTGGGGAAGGACCAACCCATGCCCTGCCAAGCCTGGAGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp TGGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCGGAGATCCTCGTCAATaGGAGGTGCAGGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: WRDHTLWVSLQSLPHAPSGDPRQ*EVQAGS
Trigger: GCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCC...GCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGGATCAGGCCTCTCTTCTaGGAGATCCTCGTCAATGGG +
Preference number: 4 (lower is better)
Translates to: EDWTETPLDVGWWERKAGIRPLF*EILVNG
Trigger: CCCATTGACGAGGATCTCCCAGAAGAGAGGCCTGAT...CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGATCAGGCCTCTCTTCTaGGAGATCCTCGTCAATGGG +
Preference number: 4 (lower is better)
Translates to: ASTYRTKLTPQGVEPALQIRPLF*EILVNG
Trigger: CCCATTGACGAGGATCTCCCAGAAGAGAGGCCTGAT...CTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp TGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGCGGGCATGTGAGGACTaGACTGAGACCCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: CEDWTETPLDVGWWERKARACED*TETPLD
Trigger: ATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCG...CGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCCGGGCATGTGAGGACTaGACTGAGACCCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: GGTTLCGYLFRASPMPPARACED*TETPLD
Trigger: ATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCG...GGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGGAGGGACCACACTCTGTaGGTATCTCTTCAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: EDWTETPLDVGWWERKAGRDHTL*VSLQSL
Trigger: GAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCT...CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp CAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGGGATGGTCAGGCAGGTaGGGGCTCAGAACACTGTTG +
Preference number: 4 (lower is better)
Translates to: QRACEDWTETPLDVGWWEGWSGR*GLRTLL
Trigger: CAACAGTGTTCTGAGCCCCCACCTGCCTGACCATCC...CTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GAGCACCCTCCTCTTCCAGGGCCCGGTGAGTGGGGAGGTGCATGTCTTTTGCTCGCTCTGGACTGCTCATaGGATGGTCAGGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: EHPPLPGPGEWGGACLLLALDCS*DGQAGG
Trigger: CCCACCTGCCTGACCATCCCATGAGCAGTCCAGAGC...GAGCAAAAGACATGCACCTCCCCACTCACCGGGCCCTGGAAGAGGAGGGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp GGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACAGAGTCCTCAGAGGTaGGAACGGAGGCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: GQAQGDPWDSGHVRTGLRQSPQR*ERRLLD
Trigger: ATCAAGGAGCCTCCGTTCCCACCTCTGAGGACTCTG...TCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp ATAGGGGTCAGTCCCACCACGAAGGAGAGGATCCAGCAGCCGGCTATGGCCACCGCACCTGGTATGGCCTaGGGTCCAGAGTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: IGVSPTTKERIQQPAMATAPGMA*GPESSE
Trigger: CTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGC...GGTGGCCATAGCCGGCTGCTGGATCCTCTCCTTCGTGGTGGGACTGACCCCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp CAGGGGCTCCAGGCTTGGCAGGGCATGGGTTGGTCCTTCCCCAGATCCCTAAAGTCCCACGTACAATCCTaGGCTGGCCCAGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: QGLQAWQGMGWSFPRSLKSHVQS*AGPGQG
Trigger: TCCTTGCCCTGGGCCAGCCCAGGATTGTACGTGGGA...CTTTAGGGATCTGGGGAAGGACCAACCCATGCCCTGCCAAGCCTGGAGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp TGGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCTCACTCCCCAGGGCGTaGAGCCAGCACTCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: WRDHTLWVSLQSLPHAPSSLPRA*SQHSSK
Trigger: TTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGA...GCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGGACAGAGGGAAGGGCTTaGAAGCAAGTCCTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: EDWTETPLDVGWWERKAGTEGRA*KQVLEL
Trigger: CAACTCCAGGACTTGCTTCCAAGCCCTTCCCTCTGT...CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp ACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATACAGAGGGATGGTAGCTaGCTGGGACTCGACTCGGGC +
Preference number: 4 (lower is better)
Translates to: TYRTKLTPQGVEPALQQIQRDGS*LGLDSG
Trigger: GCCCGAGTCGAGTCCCAGCCAGCTACCATCCCTCTG...TATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp GGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGCTTCCCAGGATCTCCTaGCAGTGTAACCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GDPWDSGHVRTGLRPHWMLPRIS*QCNPLC
Trigger: GCAGAGCGGGTTACACTGCCAGGAGATCCTGGGAAG...CATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS-3UTR CCA 90 bp CAGGGGCTCCAGGCTTGGCAGGGCATGGGTTGGTCCTTCCCCAGATCCCTAAAGTCAATGCAGGACTCCTaGGAGCCCTGGTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QGLQAWQGMGWSFPRSLKSMQDS*EPWSGL
Trigger: GAGGCCAGACCAGGGCTCCCAGGAGTCCTGCATTGA...CTTTAGGGATCTGGGGAAGGACCAACCCATGCCCTGCCAAGCCTGGAGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS-3UTR TCA 90 bp ACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATACCGGACAGGCAACCATaGGGCAGGTGTGGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: TYRTKLTPQGVEPALQQIPDRQP*GRCGSR
Trigger: CCTACTTCCACACCTGCCTCATGGTTGCCTGTCCGG...TATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp TCAGGCCTCTCTTCTGGGAGATCCTCGTCAATGGGAGGTGCAGGCTGGCAGCGGGCAAAGGCAGCCAGCTaGGGGCAAAGAGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SGLSSGRSSSMGGAGWQRAKAAS*GQRGRG
Trigger: TCCTCTTCCTCTTTGCCCTCAGCTGGCTGCCTTTGC...CCGCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCCCAGAAGAGAGGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR TCA 90 bp AGGAGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGCCGAGTTGCCGTGCGTaGGGAAGATGGCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: RRAGTLAPGMAWGPESSEPSCRA*GRWQCR
Trigger: CCTACATTGCCATCTTCCTCACGCACGGCAACTCGG...CTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp TGGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCCGAGTTGCCGTGCGTaGGGAAGATGGCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: WRDHTLWVSLQSLPHAPSPSCRA*GRWQCR
Trigger: CCTACATTGCCATCTTCCTCACGCACGGCAACTCGG...GCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR TCA 90 bp GGGGCCTCTAAGAGGAGCACCCTCCTCTTCCAGGGCCCGGTGAGTGGGGAGGTGAGCTGGTGGCCCAGATaGCAGGTAATTACACTCCAA +
Preference number: 4 (lower is better)
Translates to: GASKRSTLLFQGPVSGEVSWWPR*QVITLQ
Trigger: TTGGAGTGTAATTACCTGTCATCTGGGCCACCAGCT...CACCTCCCCACTCACCGGGCCCTGGAAGAGGAGGGTGCTCCTCTTAGAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR TCA 90 bp GGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCAACCCTGCTCTCTCCATaGAACCAGTCCCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: GSGRPLGQRACEDWTETPTLLSP*NQSLHL
Trigger: AAGATGCAGGGACTGGTTTCATGGAGAGAGCAGGGT...TGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS-3UTR GCA 90 bp AGGAGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGACTGTTCTGTCCAAGTaGCCCCACACCTCGACGCCT +
Preference number: 4 (lower is better)
Translates to: RRAGTLAPGMAWGPESSETVLSK*PHTSTP
Trigger: AGGCGTCGAGGTGTGGGGGCACTTGGACAGAACAGT...CTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp AAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGATTCGGGCTCCCCCATGCTaGCGTTGGCTGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: KLTPQGVEPALQQISEMIRAPPC*RWLPRP
Trigger: GGGCCTGGGCAGCCAACGGCAGCATGGGGGAGCCCG...AATCATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp TGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGATGGCCGAGTTGCCGTaGGTGAGGAAGATGGCAATG +
Preference number: 4 (lower is better)
Translates to: CEDWTETPLDVGWWERKAMAELP*VRKMAM
Trigger: CATTGCCATCTTCCTCACGCACGGCAACTCGGCCAT...CGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR GCA 90 bp CAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGATGGCCGAGTTGCCGTaGGTGAGGAAGATGGCAATG +
Preference number: 4 (lower is better)
Translates to: QRACEDWTETPLDVGWWEMAELP*VRKMAM
Trigger: CATTGCCATCTTCCTCACGCACGGCAACTCGGCCAT...CTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR GCA 90 bp CTCCTCTTCCAGGGCCCGGTGAGTGGGGAGGTGCATGTCTTTTGCTCGAGGGCTCTCGTCAATGGGAGGTaGAGGCTGGCAGCGGAAATG +
Preference number: 4 (lower is better)
Translates to: LLFQGPVSGEVHVFCSRALVNGR*RLAAEM
Trigger: CATTTCCGCTGCCAGCCTGCACCTCCCATTGACGAG...AGCCCTCGAGCAAAAGACATGCACCTCCCCACTCACCGGGCCCTGGAAGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR GCA 90 bp GGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGCCTGAAGCTCTGGACTaGTCATGGGATGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GDPWDSGHVRTGLRPHWMPEALD*SWDGQA
Trigger: TGCCTGACCATCCCATGAGCAGTCCAGAGCTTCAGG...CATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp GAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCACCCAGGCAGGCAGAATaGTCCCGAGTTGGCATGTCT +
Preference number: 4 (lower is better)
Translates to: EGPHSVGISSEPPPCPQPPRQAE*SRVGMS
Trigger: AGACATGCCAACTCGGGAGCATTCTGCCTGCCTGGG...TGGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp GCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGCCCAGGCAGGCAGAATaGTCCCGAGTTGGCATGTCT +
Preference number: 4 (lower is better)
Translates to: ACEDWTETPLDVGWWERKPRQAE*SRVGMS
Trigger: AGACATGCCAACTCGGGAGCATTCTGCCTGCCTGGG...CTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp AGGAGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGGGGGGTACTCTCCTCTaGCTGCTGCAGCCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: RRAGTLAPGMAWGPESSEGGTLL*LLQPAK
Trigger: TTTAGCAGGCTGCAGCAGGCAGAGGAGAGTACCCCC...CTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCTCCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp AAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGATTTCCAGCAGCCGGCTATaGCCACCGCCGCCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: KLTPQGVEPALQQISEMISSSRL*PPPPSG
Trigger: CCCGGAGGGCGGCGGTGGCCATAGCCGGCTGCTGGA...AATCATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCGGAAGGCATAGACAATaGGGTTCATGGCCGAGTTGC +
Preference number: 4 (lower is better)
Translates to: AGSGRPLGQRACEDWTETGRHRQ*GSWPSC
Trigger: GCAACTCGGCCATGAACCCCATTGTCTATGCCTTCC...GGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGGAAGGCATAGACAATaGGGTTCATGGCCGAGTTGC +
Preference number: 4 (lower is better)
Translates to: VRTGLRPHWMWAGGSGRRGRHRQ*GSWPSC
Trigger: GCAACTCGGCCATGAACCCCATTGTCTATGCCTTCC...CCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp TGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGATGGGAGGTGCAGGCTaGCAGCGGAAATGGTCATTC +
Preference number: 4 (lower is better)
Translates to: CLRPAPTAPSSLPRAWSQMGGAG*QRKWSF
Trigger: GAATGACCATTTCCGCTGCCAGCCTGCACCTCCCAT...CTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGATGGGAGGTGCAGGCTaGCAGCGGAAATGGTCATTC +
Preference number: 4 (lower is better)
Translates to: GDPWDSGHVRTGLRPHWMMGGAG*QRKWSF
Trigger: GAATGACCATTTCCGCTGCCAGCCTGCACCTCCCAT...CATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCTTGCCTCTAGACACCTaGTCCCTCCGTAGGACCCTT +
Preference number: 4 (lower is better)
Translates to: GGTTLCGYLFRASPMPPALPLDT*SLRRTL
Trigger: AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAA...GGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCAGGATGGTCAGGCAGGTaGGGGCTCAGAACACTGTTG +
Preference number: 4 (lower is better)
Translates to: EGPHSVGISSEPPPCPQPGWSGR*GLRTLL
Trigger: CAACAGTGTTCTGAGCCCCCACCTGCCTGACCATCC...TGGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp TGGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCCAGCCCTGAAGCTCTaGACTGCTCATGGGATGGTC +
Preference number: 4 (lower is better)
Translates to: WRDHTLWVSLQSLPHAPSPALKL*TAHGMV
Trigger: GACCATCCCATGAGCAGTCCAGAGCTTCAGGGCTGG...GCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp TCAGGCCTCTCTTCTGGGAGATCCTCGTCAATGGGAGGTGCAGGCTGGCAGCGGCCAGCCCTGAAGCTCTaGACTGCTCATGGGATGGTC +
Preference number: 4 (lower is better)
Translates to: SGLSSGRSSSMGGAGWQRPALKL*TAHGMV
Trigger: GACCATCCCATGAGCAGTCCAGAGCTTCAGGGCTGG...CCGCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCCCAGAAGAGAGGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp CTTCAGCTCCTTCCCATAGTACTTCTGCGGGTCGCCGGAGGAGGCCGACACCTTTTCTCCCAGCCCAGGTaGCTCCTCTGCAGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LQLLPIVLLRVAGGGRHLFSQPR*LLCSLS
Trigger: GCTGAGACTGCAGAGGAGCCACCTGGGCTGGGAGAA...AAGGTGTCGGCCTCCTCCGGCGACCCGCAGAAGTACTATGGGAAGGAGCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp TCAGGCCTCTCTTCTGGGAGATCCTCGTCAATGGGAGGTGCAGGCTGGCAGCGGAGAGCTACCACCTCGTaGCTGTTTGAGGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: SGLSSGRSSSMGGAGWQRRATTS*LFEAST
Trigger: GGTGCTGGCCTCAAACAGCCACGAGGTGGTAGCTCT...CCGCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCCCAGAAGAGAGGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp TGGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCTGGCAGGGCATGGGTTaGTCCTTCCCCAGATCCCTA +
Preference number: 4 (lower is better)
Translates to: WRDHTLWVSLQSLPHAPSWQGMG*SFPRSL
Trigger: TAGGGATCTGGGGAAGGACCAACCCATGCCCTGCCA...GCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
3UTR CAA 72 bp AAGAAGGAGGGCTCAGAGCTACCACCTCGTGGCTGTTaGAGGCCAGCACCTACCGCACCAAGCTCACTCCCC +
Preference number: 4 (lower is better)
Translates to: KKEGSELPPRGC*RPAPTAPSSLP
Trigger: GGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGAGGTGGTAGCTCTGAGCCCTCCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp AACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCAGACAGAGACCAGGGCGATaGGCACCTCGATGCCGATGT +
Preference number: 4 (lower is better)
Translates to: NTESLQTLPRPPRSQAGRQRPGR*APRCRC
Trigger: ACATCGGCATCGAGGTGCTCATCGCCCTGGTCTCTG...TCTGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp GTGTTCTCCTCTCCATCAGGCCCAGAAGCAGCAGAGATGGGGTCACCTAGGACACCGCCAGCGACACGATaGAGCAGAAGGTGGCATCCC +
Preference number: 4 (lower is better)
Translates to: VFSSPSGPEAAEMGSPRTPPATR*SRRWHP
Trigger: GGGATGCCACCTTCTGCTTCATCGTGTCGCTGGCGG...TGTCCTAGGTGACCCCATCTCTGCTGCTTCTGGGCCTGATGGAGAGGAGAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp AGGTGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCGCAAAGGCAGCCAGCTaGGGGCAAAGAGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: RWGLRTLLPLDTWSLRRTAKAAS*GQRGRG
Trigger: TCCTCTTCCTCTTTGCCCTCAGCTGGCTGCCTTTGC...GGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp CAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGATTGAGGGATTCACATaGCAGCAAGGCCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: QRACEDWTETPLDVGWWEIEGFT*QQGLPP
Trigger: TGGGGGAAGGCCTTGCTGTCATGTGAATCCCTCAAT...CTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp AGGAGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGAAACCCTTCCTCACCTaGCAGCCTCACAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: RRAGTLAPGMAWGPESSEKPFLT*QPHRGR
Trigger: TCTCCCTCTGTGAGGCTGGCAGGTGAGGAAGGGTTT...CTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309502.7
CDS-3UTR GCA 90 bp AGGTGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCACTGTTCTGTCCAAGTaGCCCCACACCTCGACGCCT +
Preference number: 4 (lower is better)
Translates to: RWGLRTLLPLDTWSLRRTTVLSK*PHTSTP
Trigger: AGGCGTCGAGGTGTGGGGGCACTTGGACAGAACAGT...GGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp AGGTGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCGGGTCCCAGAGGCAGTaGCCAAAGTTCCAGGGAACA +
Preference number: 4 (lower is better)
Translates to: RWGLRTLLPLDTWSLRRTGSQRQ*PKFQGT
Trigger: TGTTCCCTGGAACTTTGGGCACTGCCTCTGGGACCC...GGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
CDS-3UTR GCA 90 bp ACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGAAGCACCATCCTGCCTaGTGGCCGGCAGGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: TKLTPQGVEPALQQISEMKHHPA*WPAGVP
Trigger: TGGGACCCCTGCCGGCCAGCAGGCAGGATGGTGCTT...CATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
CDS-3UTR GCA 90 bp CAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCCACATGCATGCTGCCGTTGGCTaGCCAGGCCCGCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: QILGVLRDSHDSKAFPHMHAAVG*PGPLHR
Trigger: GCGGTGGAGCGGGCCTGGGCAGCCAACGGCAGCATG...CATGTGGGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp GAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCAATGGCCGAGTTGCCGTaGGTGAGGAAGATGGCAATG +
Preference number: 4 (lower is better)
Translates to: EGPHSVGISSEPPPCPQPMAELP*VRKMAM
Trigger: CATTGCCATCTTCCTCACGCACGGCAACTCGGCCAT...TGGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR GCA 90 bp AGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGGTGATGGCCGAGTTGCCGTaGGTGAGGAAGATGGCAATG +
Preference number: 4 (lower is better)
Translates to: RAGTLAPGMAWGPESSEVMAELP*VRKMAM
Trigger: CATTGCCATCTTCCTCACGCACGGCAACTCGGCCAT...CACCTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp TCGTGGCTGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGCGCGGAACTTCTGGATaGGGAAGGCATAGACAATGG +
Preference number: 4 (lower is better)
Translates to: SWLFEASTYRTKLTPQGVRGTSG*GRHRQW
Trigger: CCATTGTCTATGCCTTCCGCATCCAGAAGTTCCGCG...CACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp CCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTCGCGGAACTTCTGGATaGGGAAGGCATAGACAATGG +
Preference number: 4 (lower is better)
Translates to: PWDSGHVRTGLRPHWMWARGTSG*GRHRQW
Trigger: CCATTGTCTATGCCTTCCGCATCCAGAAGTTCCGCG...AGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR GCA 90 bp TGGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCCTGAAGCTCTGGACTaGTCATGGGATGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: WRDHTLWVSLQSLPHAPSPEALD*SWDGQA
Trigger: TGCCTGACCATCCCATGAGCAGTCCAGAGCTTCAGG...GCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp CCCCAGGGGCGCCTACAGTCAACACTGAGTCCTTACAGACACTCCCTCGTCCACACAAGCAGACTCCCCTaGCTCACCGCAGAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: PQGRLQSTLSPYRHSLVHTSRLP*LTAEAQ
Trigger: TTGGGCTTCTGCGGTGAGGCAGGGGAGTCTGCTTGT...GTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTTGACTGTAGGCGCCCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp GGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACCGTCTCAGAGCAGATaGTCTCCTCTCCTTAAGCTT +
Preference number: 4 (lower is better)
Translates to: GSGRPLGQRACEDWTETPPSQSR*SPLLKL
Trigger: AAGCTTAAGGAGAGGAGAGCATCTGCTCTGAGACGG...TGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp GCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCGAGGTGCATGTCTTTTaGTCGAGGGCTGAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: AGSGRPLGQRACEDWTETEVHVF*SRAESS
Trigger: TGAAGACTCAGCCCTCGAGCAAAAGACATGCACCTC...GGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR GCA 90 bp GGTGGGAGCGGAAGGCGGGGTCTAGTCATCAGGCCTCTCTTCTGGGAGATCCTCCAGAGTGTGAGGATCTaGCTCCCAGCTGCCTCGAAA +
Preference number: 4 (lower is better)
Translates to: GGSGRRGLVIRPLFWEILQSVRI*LPAASK
Trigger: TTTCGAGGCAGCTGGGAGGCAGATCCTCACACTCTG...GAGGATCTCCCAGAAGAGAGGCCTGATGACTAGACCCCGCCTTCCGCTCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp AGAGCTACCACCTCGTGGCTGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTGCCAGGATGGAGCTCTaGGTGAGGATGAGGACCGGA +
Preference number: 4 (lower is better)
Translates to: RATTSWLFEASTYRTKLTARMEL*VRMRTG
Trigger: TCCGGTCCTCATCCTCACCCAGAGCTCCATCCTGGC...AGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGAGGTGGTAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp CCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGAAGGCATAGACAATaGGGTTCATGGCCGAGTTGC +
Preference number: 4 (lower is better)
Translates to: PWDSGHVRTGLRPHWMWAGRHRQ*GSWPSC
Trigger: GCAACTCGGCCATGAACCCCATTGTCTATGCCTTCC...AGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp CCCCTGCCTCACCGCAGAAGCCCAAGCACCTTCTCCCAGCCCAGGTGGCTCCTCGGCTGGCAGCGGAAATaGTCATTCCAAATCTTAAGG +
Preference number: 4 (lower is better)
Translates to: PLPHRRSPSTFSQPRWLLGWQRK*SFQILR
Trigger: CCTTAAGATTTGGAATGACCATTTCCGCTGCCAGCC...GAGGAGCCACCTGGGCTGGGAGAAGGTGCTTGGGCTTCTGCGGTGAGGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGGGGCTGGCAGCGGAAATaGTCATTCCAAATCTTAAGG +
Preference number: 4 (lower is better)
Translates to: EDWTETPLDVGWWERKAGGWQRK*SFQILR
Trigger: CCTTAAGATTTGGAATGACCATTTCCGCTGCCAGCC...CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGATGGGAGGTGCAGGCTaGCAGCGGAAATGGTCATTC +
Preference number: 4 (lower is better)
Translates to: ACEDWTETPLDVGWWERKMGGAG*QRKWSF
Trigger: GAATGACCATTTCCGCTGCCAGCCTGCACCTCCCAT...CTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGATCAGGCCTCTCTTCTaGGAGATCCTCGTCAATGGG +
Preference number: 4 (lower is better)
Translates to: GDPWDSGHVRTGLRPHWMIRPLF*EILVNG
Trigger: CCCATTGACGAGGATCTCCCAGAAGAGAGGCCTGAT...CATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp CAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGATCAGGCCTCTCTTCTaGGAGATCCTCGTCAATGGG +
Preference number: 4 (lower is better)
Translates to: QRACEDWTETPLDVGWWEIRPLF*EILVNG
Trigger: CCCATTGACGAGGATCTCCCAGAAGAGAGGCCTGAT...CTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp TTGGGAGCCAGGGCACACCCAATTTCCAACAGAGGGAAGGGCTTGGAAGCAAGTCTGGATGTGGGCTGGTaGGAGCGGAAGGCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LGARAHPISNRGKGLEASLDVGW*ERKAGS
Trigger: AGACCCCGCCTTCCGCTCCCACCAGCCCACATCCAG...ACTTGCTTCCAAGCCCTTCCCTCTGTTGGAAATTGGGTGTGCCCTGGCTCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp CAGGGGCTCCAGGCTTGGCAGGGCATGGGTTGGTCCTTCCCCAGATCCCTAAAGTTGCCTCTAGACACCTaGTCCCTCCGTAGGACCCTT +
Preference number: 4 (lower is better)
Translates to: QGLQAWQGMGWSFPRSLKLPLDT*SLRRTL
Trigger: AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAA...CTTTAGGGATCTGGGGAAGGACCAACCCATGCCCTGCCAAGCCTGGAGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp ATAGGGGTCAGTCCCACCACGAAGGAGAGGATCCAGCAGCCGGCTATGGCCACCTTGCCTCTAGACACCTaGTCCCTCCGTAGGACCCTT +
Preference number: 4 (lower is better)
Translates to: IGVSPTTKERIQQPAMATLPLDT*SLRRTL
Trigger: AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAA...GGTGGCCATAGCCGGCTGCTGGATCCTCTCCTTCGTGGTGGGACTGACCCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp TCAACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCAGCTCTGGACTGCTCATaGGATGGTCAGGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: STLSPYRHSLVHPVPRQAALDCS*DGQAGG
Trigger: CCCACCTGCCTGACCATCCCATGAGCAGTCCAGAGC...TGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp TGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCCTTTTCTCCCAGCCCAGGTaGCTCCTCTGCAGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: WGLRTLLPLDTWSLRRTLFSQPR*LLCSLS
Trigger: GCTGAGACTGCAGAGGAGCCACCTGGGCTGGGAGAA...AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp AACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCAGATTCTCCCAGCCCAGGTaGCTCCTCTGCAGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: NTESLQTLPRPPRSQAGRFSQPR*LLCSLS
Trigger: GCTGAGACTGCAGAGGAGCCACCTGGGCTGGGAGAA...TCTGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp TGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCCTTTCCCACGTACAATCCTaGGCTGGCCCAGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: WGLRTLLPLDTWSLRRTLSHVQS*AGPGQG
Trigger: TCCTTGCCCTGGGCCAGCCCAGGATTGTACGTGGGA...AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp CAGGGGCTCCAGGCTTGGCAGGGCATGGGTTGGTCCTTCCCCAGATCCCTAAAGTCAGAATGCCCCCTCTaGGATCTCCCAAAGCAGTCG +
Preference number: 4 (lower is better)
Translates to: QGLQAWQGMGWSFPRSLKSECPL*DLPKQS
Trigger: CGACTGCTTTGGGAGATCCCAGAGGGGGCATTCTGA...CTTTAGGGATCTGGGGAAGGACCAACCCATGCCCTGCCAAGCCTGGAGCCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367236.8
3UTR CAA 72 bp TCCACCCCGTTCCCAGGCAGGCAGAATGCTCCCGAGTaGGCATGTCTAGTGTTCTCCTCTCCATCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: STPFPGRQNAPE*ACLVFSSPSGP
Trigger: TGGGCCTGATGGAGAGGAGAACACTAGACATGCCAACTCGGGAGCATTCTGCCTGCCTGGGAACGGGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp CAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCCACATGGGCGGCCTGGAAAGCTaGGATGGAGGGCGGCATGGC +
Preference number: 4 (lower is better)
Translates to: QILGVLRDSHDSKAFPHMGGLES*DGGRHG
Trigger: GCCATGCCGCCCTCCATCTCAGCTTTCCAGGCCGCC...CATGTGGGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp CCCAGCCAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCCCGCCAGCGACACGATaGAGCAGAAGGTGGCATCCC +
Preference number: 4 (lower is better)
Translates to: PSQILGVLRDSHDSKAFPPPATR*SRRWHP
Trigger: GGGATGCCACCTTCTGCTTCATCGTGTCGCTGGCGG...GGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTGGCTGGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp CCCCTGCCTCACCGCAGAAGCCCAAGCACCTTCTCCCAGCCCAGGTGGCTCCTCCCCACACAAAGAAGTTaGAGTAGACCATGTACTCCA +
Preference number: 4 (lower is better)
Translates to: PLPHRRSPSTFSQPRWLLPTQRS*SRPCTP
Trigger: TGGAGTACATGGTCTACTTCAACTTCTTTGTGTGGG...GAGGAGCCACCTGGGCTGGGAGAAGGTGCTTGGGCTTCTGCGGTGAGGCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp CAGGGGCTCCAGGCTTGGCAGGGCATGGGTTGGTCCTTCCCCAGATCCCTAAAGCCGACACCTTCTTGTTaGGCTGCTTGCGGATTAGGT +
Preference number: 4 (lower is better)
Translates to: QGLQAWQGMGWSFPRSLKPTPSC*AACGLG
Trigger: ACCTAATCCGCAAGCAGCTCAACAAGAAGGTGTCGG...CTTTAGGGATCTGGGGAAGGACCAACCCATGCCCTGCCAAGCCTGGAGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp AACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCAGACAAAGAGGAAGAGGATaGGGGCCAGCGACTTGGCGA +
Preference number: 4 (lower is better)
Translates to: NTESLQTLPRPPRSQAGRQRGRG*GPATWR
Trigger: TCGCCAAGTCGCTGGCCCTCATCCTCTTCCTCTTTG...TCTGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp CAGAAGCAGCAGAGATGGGGTCACCTAGGACAGTCCAGGCCCGGCAACGGGCAGAGCTGGTGGCCCAGATaGCAGGTAATTACACTCCAA +
Preference number: 4 (lower is better)
Translates to: QKQQRWGHLGQSRPGNGQSWWPR*QVITLQ
Trigger: TTGGAGTGTAATTACCTGTCATCTGGGCCACCAGCT...CTGCCCGTTGCCGGGCCTGGACTGTCCTAGGTGACCCCATCTCTGCTGCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp CCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTAGCTGGTGGCCCAGATaGCAGGTAATTACACTCCAA +
Preference number: 4 (lower is better)
Translates to: PWDSGHVRTGLRPHWMWASWWPR*QVITLQ
Trigger: TTGGAGTGTAATTACCTGTCATCTGGGCCACCAGCT...AGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp CCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTAGCTTCCAAAGCCCCTaGAAACCCAGCCAGATACTA +
Preference number: 4 (lower is better)
Translates to: PWDSGHVRTGLRPHWMWASFQSP*KPSQIL
Trigger: TAGTATCTGGCTGGGTTTTCAGGGGCTTTGGAAGCT...AGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp CTGAGGGCAAAGAGGAAGAGGATGAGGGCCAGCGACTTGGCGATCTTCAGCTCCGGGTCCCAGAGGCAGTaGCCAAAGTTCCAGGGAACA +
Preference number: 4 (lower is better)
Translates to: LRAKRKRMRASDLAIFSSGSQRQ*PKFQGT
Trigger: TGTTCCCTGGAACTTTGGGCACTGCCTCTGGGACCC...GGAGCTGAAGATCGCCAAGTCGCTGGCCCTCATCCTCTTCCTCTTTGCCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR GCA 90 bp ACCATGTACTCCATGCTGATGACCTTCTCGAACTCGCACTTGATCACGGGCTCCAGGCAAGCACCATCCTaGCTGCTGGCCGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: TMYSMLMTFSNSHLITGSRQAPS*LLAGRG
Trigger: ACCCCTGCCGGCCAGCAGGCAGGATGGTGCTTGCCT...GGAGCCCGTGATCAAGTGCGAGTTCGAGAAGGTCATCAGCATGGAGTACATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR GCA 90 bp AGAGCTACCACCTCGTGGCTGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCTCGTCAATGGGAGGTaGAGGCTGGCAGCGGAAATG +
Preference number: 4 (lower is better)
Translates to: RATTSWLFEASTYRTKLTLVNGR*RLAAEM
Trigger: CATTTCCGCTGCCAGCCTGCACCTCCCATTGACGAG...AGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGAGGTGGTAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp GATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCTAAGATCAGAGCCTCCCCCATaGCCCCAGCCAACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: DALLSLSLVLGLHHQHLRSEPPP*PQPTAQ
Trigger: CTGGGCTGTTGGCTGGGGGCATGGGGGAGGCTCTGA...TCTTAGATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp TGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCCTTACAAGCAGACTCCCCTaGCTCACCGCAGAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: WGLRTLLPLDTWSLRRTLTSRLP*LTAEAQ
Trigger: TTGGGCTTCTGCGGTGAGGCAGGGGAGTCTGCTTGT...AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp CAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGTACAGAACAGGCCAGTaGATCCTCAACCTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: QRACEDWTETPLDVGWWEYRTGQ*ILNLSP
Trigger: AGGAGAGAGGTTGAGGATGCACTGGCCTGTTCTGTA...CTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp ACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATACAGTGTAACCCGCTCTaGGCTCCTTTTCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TYRTKLTPQGVEPALQQIQCNPL*APFPSS
Trigger: GGAGGAAGGAAAAGGAGCGCAGAGCGGGTTACACTG...TATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS-3UTR CCA 90 bp GCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCGTGGAAGTAGGTCTGTaGCCCAATGTTGATGAGGAT +
Preference number: 4 (lower is better)
Translates to: AGSGRPLGQRACEDWTETVEVGL*PNVDED
Trigger: ATCCTCATCAACATTGGGCCACAGACCTACTTCCAC...GGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp TGGCAGCGGAAATGGTCATTCCAAATCTTAAGGAAGGTGACGCGGAACTTCTGGCCCCCATGCTGCCGTTaGCTGCCCAGGCCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: WQRKWSFQILRKVTRNFWPPCCR*LPRPAP
Trigger: TGGAGCGGGCCTGGGCAGCCAACGGCAGCATGGGGG...CCAGAAGTTCCGCGTCACCTTCCTTAAGATTTGGAATGACCATTTCCGCTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp GTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGGCTGGCAGCGGAAATaGTCATTCCAAATCTTAAGG +
Preference number: 4 (lower is better)
Translates to: VRTGLRPHWMWAGGSGRRGWQRK*SFQILR
Trigger: CCTTAAGATTTGGAATGACCATTTCCGCTGCCAGCC...CCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCAGGCTGGCAGCGGAAATaGTCATTCCAAATCTTAAGG +
Preference number: 4 (lower is better)
Translates to: GSGRPLGQRACEDWTETPGWQRK*SFQILR
Trigger: CCTTAAGATTTGGAATGACCATTTCCGCTGCCAGCC...TGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CCA 90 bp GATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCTAAGACTGGATGTGGGCTGGTaGGAGCGGAAGGCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: DALLSLSLVLGLHHQHLRLDVGW*ERKAGS
Trigger: AGACCCCGCCTTCCGCTCCCACCAGCCCACATCCAG...TCTTAGATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp TCAACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCAGGATGGTCAGGCAGGTaGGGGCTCAGAACACTGTTG +
Preference number: 4 (lower is better)
Translates to: STLSPYRHSLVHPVPRQAGWSGR*GLRTLL
Trigger: CAACAGTGTTCTGAGCCCCCACCTGCCTGACCATCC...TGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp AGAGCTACCACCTCGTGGCTGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCAGCCCTGAAGCTCTaGACTGCTCATGGGATGGTC +
Preference number: 4 (lower is better)
Translates to: RATTSWLFEASTYRTKLTPALKL*TAHGMV
Trigger: GACCATCCCATGAGCAGTCCAGAGCTTCAGGGCTGG...AGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGAGGTGGTAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp TGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCCTTCCAGCCCTGAAGCTCTaGACTGCTCATGGGATGGTC +
Preference number: 4 (lower is better)
Translates to: WGLRTLLPLDTWSLRRTLPALKL*TAHGMV
Trigger: GACCATCCCATGAGCAGTCCAGAGCTTCAGGGCTGG...AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp CCCCAGGGGCGCCTACAGTCAACACTGAGTCCTTACAGACACTCCCTCGTCCACCAGAGTCCTCAGAGGTaGGAACGGAGGCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: PQGRLQSTLSPYRHSLVHQSPQR*ERRLLD
Trigger: ATCAAGGAGCCTCCGTTCCCACCTCTGAGGACTCTG...GTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTTGACTGTAGGCGCCCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp GTGTTCTCCTCTCCATCAGGCCCAGAAGCAGCAGAGATGGGGTCACCTAGGACATCCCACGTACAATCCTaGGCTGGCCCAGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: VFSSPSGPEAAEMGSPRTSHVQS*AGPGQG
Trigger: TCCTTGCCCTGGGCCAGCCCAGGATTGTACGTGGGA...TGTCCTAGGTGACCCCATCTCTGCTGCTTCTGGGCCTGATGGAGAGGAGAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp GATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCTAAGACAGGGGCTCCAGGCTTaGCAGGGCATGGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: DALLSLSLVLGLHHQHLRQGLQA*QGMGWS
Trigger: GGACCAACCCATGCCCTGCCAAGCCTGGAGCCCCTG...TCTTAGATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp TGGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCACAGAGGGAAGGGCTTaGAAGCAAGTCCTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: WRDHTLWVSLQSLPHAPSTEGRA*KQVLEL
Trigger: CAACTCCAGGACTTGCTTCCAAGCCCTTCCCTCTGT...GCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp GATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCTAAGAGGGATGGTAGCTGGCTaGGACTCGACTCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: DALLSLSLVLGLHHQHLRGMVAG*DSTRAP
Trigger: AGGCGCCCGAGTCGAGTCCCAGCCAGCTACCATCCC...TCTTAGATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp GAGGGCAAAGAGGAAGAGGATGAGGGCCAGCGACTTGGCGATCTTCAGCTCCTTCCAGGGCCCGGTGAGTaGGGAGGTGCATGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: EGKEEEDEGQRLGDLQLLPGPGE*GGACLL
Trigger: CAAAAGACATGCACCTCCCCACTCACCGGGCCCTGG...AAGGAGCTGAAGATCGCCAAGTCGCTGGCCCTCATCCTCTTCCTCTTTGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp AGAGCAGATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATGCCCAGCCTCAGGACTaGACAGAGGCGCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: RADALLSLSLVLGLHHQHAQPQD*TEAHPS
Trigger: GGAAGGATGCGCCTCTGTCCAGTCCTGAGGCTGGGC...ATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATCTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS-3UTR TCA 90 bp AGGTGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCCCGACACCTTCTTGTTaGGCTGCTTGCGGATTAGGT +
Preference number: 4 (lower is better)
Translates to: RWGLRTLLPLDTWSLRRTPTPSC*AACGLG
Trigger: ACCTAATCCGCAAGCAGCTCAACAAGAAGGTGTCGG...GGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp ACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGGGAACGGAGGCTCCTTaGTTCCTGCCCCTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: TKLTPQGVEPALQQISEMGTEAP*FLPLSC
Trigger: GCAGCTAAGGGGCAGGAATCAAGGAGCCTCCGTTCC...CATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp GATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCTAAGACACCTCGTGGCTGTTTaGGGCCAGCACCTACCGCAC +
Preference number: 4 (lower is better)
Translates to: DALLSLSLVLGLHHQHLRHLVAV*GQHLPH
Trigger: GTGCGGTAGGTGCTGGCCTCAAACAGCCACGAGGTG...TCTTAGATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp CCCCTGCCTCACCGCAGAAGCCCAAGCACCTTCTCCCAGCCCAGGTGGCTCCTCTTGCAGGCTCTACCCTaGGTCATTATATTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: PLPHRRSPSTFSQPRWLLLQALP*VIIFLS
Trigger: AGAAAGGAATATAATGACTCAGGGTAGAGCCTGCAA...GAGGAGCCACCTGGGCTGGGAGAAGGTGCTTGGGCTTCTGCGGTGAGGCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS-3UTR GCA 90 bp CCCAGCCAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCGCGGTCCACAGCAATTaGCAGCAGGGCCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: PSQILGVLRDSHDSKAFPAVHSN*QQGQDG
Trigger: TCCATCCTGGCCCTGCTGGCAATTGCTGTGGACCGC...GGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp CCCCAGGGGCGCCTACAGTCAACACTGAGTCCTTACAGACACTCCCTCGTCCACCGCGGAACTTCTGGATaGGGAAGGCATAGACAATGG +
Preference number: 4 (lower is better)
Translates to: PQGRLQSTLSPYRHSLVHRGTSG*GRHRQW
Trigger: CCATTGTCTATGCCTTCCGCATCCAGAAGTTCCGCG...GTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTTGACTGTAGGCGCCCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp GGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCAACCCGTCTCAGAGCAGATaGTCTCCTCTCCTTAAGCTT +
Preference number: 4 (lower is better)
Translates to: GTTLCGYLFRASPMPPANPSQSR*SPLLKL
Trigger: AAGCTTAAGGAGAGGAGAGCATCTGCTCTGAGACGG...GTTGGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp AGGAGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGCCGTCTCAGAGCAGATaGTCTCCTCTCCTTAAGCTT +
Preference number: 4 (lower is better)
Translates to: RRAGTLAPGMAWGPESSEPSQSR*SPLLKL
Trigger: AAGCTTAAGGAGAGGAGAGCATCTGCTCTGAGACGG...CTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp GGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCAACTACAGAACAGGCCAGTaGATCCTCAACCTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GTTLCGYLFRASPMPPANYRTGQ*ILNLSP
Trigger: AGGAGAGAGGTTGAGGATGCACTGGCCTGTTCTGTA...GTTGGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp GCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGTACAGAACAGGCCAGTaGATCCTCAACCTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: ACEDWTETPLDVGWWERKYRTGQ*ILNLSP
Trigger: AGGAGAGAGGTTGAGGATGCACTGGCCTGTTCTGTA...CTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCGTGGAAGTAGGTCTGTaGCCCAATGTTGATGAGGAT +
Preference number: 4 (lower is better)
Translates to: GGTTLCGYLFRASPMPPAVEVGL*PNVDED
Trigger: ATCCTCATCAACATTGGGCCACAGACCTACTTCCAC...GGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGGTGGAAGTAGGTCTGTaGCCCAATGTTGATGAGGAT +
Preference number: 4 (lower is better)
Translates to: GDPWDSGHVRTGLRPHWMVEVGL*PNVDED
Trigger: ATCCTCATCAACATTGGGCCACAGACCTACTTCCAC...CATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp CTTCAGCTCCTTCCCATAGTACTTCTGCGGGTCGCCGGAGGAGGCCGACACCTTATCAGGCCTCTCTTCTaGGAGATCCTCGTCAATGGG +
Preference number: 4 (lower is better)
Translates to: LQLLPIVLLRVAGGGRHLIRPLF*EILVNG
Trigger: CCCATTGACGAGGATCTCCCAGAAGAGAGGCCTGAT...AAGGTGTCGGCCTCCTCCGGCGACCCGCAGAAGTACTATGGGAAGGAGCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp GGGAGCCAGGGCACACCCAATTTCCAACAGAGGGAAGGGCTTGGAAGCAAGTCCTTGCCTCTAGACACCTaGTCCCTCCGTAGGACCCTT +
Preference number: 4 (lower is better)
Translates to: GSQGTPNFQQREGLGSKSLPLDT*SLRRTL
Trigger: AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAA...GGACTTGCTTCCAAGCCCTTCCCTCTGTTGGAAATTGGGTGTGCCCTGGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp AGAGCTACCACCTCGTGGCTGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCAGAGTCCTCAGAGGTaGGAACGGAGGCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: RATTSWLFEASTYRTKLTQSPQR*ERRLLD
Trigger: ATCAAGGAGCCTCCGTTCCCACCTCTGAGGACTCTG...AGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGAGGTGGTAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp AGAGCAGATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATAGGCACCCTAGCACCTaGTATGGCCTGGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: RADALLSLSLVLGLHHQHRHPST*YGLGSR
Trigger: TCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCT...ATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATCTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp CCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTTTTTTATTAGTCACATaGGCCTCCCTTGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PWDSGHVRTGLRPHWMWAFLLVT*ASLGSQ
Trigger: CTGGCTCCCAAGGGAGGCCCATGTGACTAATAAAAA...AGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp CTTCAGCTCCTTCCCATAGTACTTCTGCGGGTCGCCGGAGGAGGCCGACACCTTGTGCTTGCCATGCATTaGCTTATTCTCCGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LQLLPIVLLRVAGGGRHLVLAMH*LILRRG
Trigger: CCCTCTCCGGAGAATAAGCCAATGCATGGCAAGCAC...AAGGTGTCGGCCTCCTCCGGCGACCCGCAGAAGTACTATGGGAAGGAGCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp CCCAGCCAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCGCTTTTCGAAGGGCCTaGTGTGTGCGCCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PSQILGVLRDSHDSKAFPAFRRA*CVRPAS
Trigger: TGAGGCTGGGCGCACACACCAGGCCCTTCGAAAAGC...GGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367236.8
3UTR CAA 72 bp ATGTACTCCATGCTGATGACCTTCTCGAACTCGCACTaGATCACGGGCTCCCCCATGCTGCCGTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: MYSMLMTFSNSH*ITGSPMLPLAA
Trigger: GGCAGCCAACGGCAGCATGGGGGAGCCCGTGATCAAGTGCGAGTTCGAGAAGGTCATCAGCATGGAGTACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR TCA 90 bp GATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCTAAGACAGAGACCAGGGCGATaGGCACCTCGATGCCGATGT +
Preference number: 4 (lower is better)
Translates to: DALLSLSLVLGLHHQHLRQRPGR*APRCRC
Trigger: ACATCGGCATCGAGGTGCTCATCGCCCTGGTCTCTG...TCTTAGATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp GGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGCCCACACAAAGAAGTTaGAGTAGACCATGTACTCCA +
Preference number: 4 (lower is better)
Translates to: GDPWDSGHVRTGLRPHWMPTQRS*SRPCTP
Trigger: TGGAGTACATGGTCTACTTCAACTTCTTTGTGTGGG...CATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR TCA 90 bp TCAACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCAATTGAGGGATTCACATaGCAGCAAGGCCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: STLSPYRHSLVHPVPRQAIEGFT*QQGLPP
Trigger: TGGGGGAAGGCCTTGCTGTCATGTGAATCCCTCAAT...TGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp CCCAGCCAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCACTGTTCTGTCCAAGTaGCCCCACACCTCGACGCCT +
Preference number: 4 (lower is better)
Translates to: PSQILGVLRDSHDSKAFPTVLSK*PHTSTP
Trigger: AGGCGTCGAGGTGTGGGGGCACTTGGACAGAACAGT...GGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp CCCAGCCAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCGGGTCCCAGAGGCAGTaGCCAAAGTTCCAGGGAACA +
Preference number: 4 (lower is better)
Translates to: PSQILGVLRDSHDSKAFPGSQRQ*PKFQGT
Trigger: TGTTCCCTGGAACTTTGGGCACTGCCTCTGGGACCC...GGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309502.7
ENST00000337894.9
CDS-3UTR GCA 90 bp GTGTTCTCCTCTCCATCAGGCCCAGAAGCAGCAGAGATGGGGTCACCTAGGACAATGGCCGAGTTGCCGTaGGTGAGGAAGATGGCAATG +
Preference number: 4 (lower is better)
Translates to: VFSSPSGPEAAEMGSPRTMAELP*VRKMAM
Trigger: CATTGCCATCTTCCTCACGCACGGCAACTCGGCCAT...TGTCCTAGGTGACCCCATCTCTGCTGCTTCTGGGCCTGATGGAGAGGAGAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp ACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGGGGGGTACTCTCCTCTaGCTGCTGCAGCCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: TKLTPQGVEPALQQISEMGGTLL*LLQPAK
Trigger: TTTAGCAGGCTGCAGCAGGCAGAGGAGAGTACCCCC...CATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp ACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGAGACCCCCGGACACCTaGAACAGAGCTTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: TKLTPQGVEPALQQISEMRPPDT*NRASKA
Trigger: GGCTTTGGAAGCTCTGTTGCAGGTGTCCGGGGGTCT...CATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp GAGCACCCTCCTCTTCCAGGGCCCGGTGAGTGGGGAGGTGCATGTCTTTTGCTCGTGGAAGTAGGTCTGTaGCCCAATGTTGATGAGGAT +
Preference number: 4 (lower is better)
Translates to: EHPPLPGPGEWGGACLLLVEVGL*PNVDED
Trigger: ATCCTCATCAACATTGGGCCACAGACCTACTTCCAC...GAGCAAAAGACATGCACCTCCCCACTCACCGGGCCCTGGAAGAGGAGGGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp CAGGGGCTCCAGGCTTGGCAGGGCATGGGTTGGTCCTTCCCCAGATCCCTAAAGGGCTGGCAGCGGAAATaGTCATTCCAAATCTTAAGG +
Preference number: 4 (lower is better)
Translates to: QGLQAWQGMGWSFPRSLKGWQRK*SFQILR
Trigger: CCTTAAGATTTGGAATGACCATTTCCGCTGCCAGCC...CTTTAGGGATCTGGGGAAGGACCAACCCATGCCCTGCCAAGCCTGGAGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp ACCATGTACTCCATGCTGATGACCTTCTCGAACTCGCACTTGATCACGGGCTCCGGAGATCCTCGTCAATaGGAGGTGCAGGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TMYSMLMTFSNSHLITGSGDPRQ*EVQAGS
Trigger: GCTGCCAGCCTGCACCTCCCATTGACGAGGATCTCC...GGAGCCCGTGATCAAGTGCGAGTTCGAGAAGGTCATCAGCATGGAGTACATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp AGAGCAGATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCGGGCATGTGAGGACTaGACTGAGACCCCACTGGAT +
Preference number: 4 (lower is better)
Translates to: RADALLSLSLVLGLHHQHRACED*TETPLD
Trigger: ATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCG...ATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATCTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp AACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCAGAAGGGACCACACTCTGTaGGTATCTCTTCAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: NTESLQTLPRPPRSQAGRRDHTL*VSLQSL
Trigger: GAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCT...TCTGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp TTGGGAGCCAGGGCACACCCAATTTCCAACAGAGGGAAGGGCTTGGAAGCAAGTGGATGGTCAGGCAGGTaGGGGCTCAGAACACTGTTG +
Preference number: 4 (lower is better)
Translates to: LGARAHPISNRGKGLEASGWSGR*GLRTLL
Trigger: CAACAGTGTTCTGAGCCCCCACCTGCCTGACCATCC...ACTTGCTTCCAAGCCCTTCCCTCTGTTGGAAATTGGGTGTGCCCTGGCTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp GATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCTAAGATTCTCCCAGCCCAGGTaGCTCCTCTGCAGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: DALLSLSLVLGLHHQHLRFSQPR*LLCSLS
Trigger: GCTGAGACTGCAGAGGAGCCACCTGGGCTGGGAGAA...TCTTAGATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GAGGGCAAAGAGGAAGAGGATGAGGGCCAGCGACTTGGCGATCTTCAGCTCCTTCAGAGTCCTCAGAGGTaGGAACGGAGGCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: EGKEEEDEGQRLGDLQLLQSPQR*ERRLLD
Trigger: ATCAAGGAGCCTCCGTTCCCACCTCTGAGGACTCTG...AAGGAGCTGAAGATCGCCAAGTCGCTGGCCCTCATCCTCTTCCTCTTTGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp GATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCTAAGATCACTCCCCAGGGCGTaGAGCCAGCACTCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: DALLSLSLVLGLHHQHLRSLPRA*SQHSSK
Trigger: TTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGA...TCTTAGATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp AAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGATTGGAACGGAGGCTCCTTaGTTCCTGCCCCTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: KLTPQGVEPALQQISEMIGTEAP*FLPLSC
Trigger: GCAGCTAAGGGGCAGGAATCAAGGAGCCTCCGTTCC...AATCATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp CAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGATCAGAAATGATTACTaGACCTACCCTTTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: QRACEDWTETPLDVGWWEIRNDY*TYPFCL
Trigger: GAGGCAGAAAGGGTAGGTTCAGTAATCATTTCTGAT...CTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp AGAGCTACCACCTCGTGGCTGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTAGCTGGTGGCCCAGATaGCAGGTAATTACACTCCAA +
Preference number: 4 (lower is better)
Translates to: RATTSWLFEASTYRTKLTSWWPR*QVITLQ
Trigger: TTGGAGTGTAATTACCTGTCATCTGGGCCACCAGCT...AGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGAGGTGGTAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp ACCATGTACTCCATGCTGATGACCTTCTCGAACTCGCACTTGATCACGGGCTCCACAAGCAGACTCCCCTaGCTCACCGCAGAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: TMYSMLMTFSNSHLITGSTSRLP*LTAEAQ
Trigger: TTGGGCTTCTGCGGTGAGGCAGGGGAGTCTGCTTGT...GGAGCCCGTGATCAAGTGCGAGTTCGAGAAGGTCATCAGCATGGAGTACATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR GCA 90 bp CCCAGCCAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCTGCAGGACTTCAGAATaGCCCCTCTGGGATCTCCCA +
Preference number: 4 (lower is better)
Translates to: PSQILGVLRDSHDSKAFPCRTSE*PLWDLP
Trigger: TGGGAGATCCCAGAGGGGGCATTCTGAAGTCCTGCA...GGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS-3UTR CCA 90 bp GAGGGCAAAGAGGAAGAGGATGAGGGCCAGCGACTTGGCGATCTTCAGCTCCTTAGGGACCACACTCTGTaGGTATCTCTTCAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: EGKEEEDEGQRLGDLQLLRDHTL*VSLQSL
Trigger: GAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCT...AAGGAGCTGAAGATCGCCAAGTCGCTGGCCCTCATCCTCTTCCTCTTTGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CCA 90 bp CAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCCACATGGCACCTGGTATGGCCTaGGGTCCAGAGTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: QILGVLRDSHDSKAFPHMAPGMA*GPESSE
Trigger: CTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGC...CATGTGGGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp GATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCTAAGATGGCAGGGCATGGGTTaGTCCTTCCCCAGATCCCTA +
Preference number: 4 (lower is better)
Translates to: DALLSLSLVLGLHHQHLRWQGMG*SFPRSL
Trigger: TAGGGATCTGGGGAAGGACCAACCCATGCCCTGCCA...TCTTAGATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp CAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCCACATGCAAAGAGGAAGAGGATaGGGGCCAGCGACTTGGCGA +
Preference number: 4 (lower is better)
Translates to: QILGVLRDSHDSKAFPHMQRGRG*GPATWR
Trigger: TCGCCAAGTCGCTGGCCCTCATCCTCTTCCTCTTTG...CATGTGGGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp CAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCCACATGGCAAAGGCAGCCAGCTaGGGGCAAAGAGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: QILGVLRDSHDSKAFPHMAKAAS*GQRGRG
Trigger: TCCTCTTCCTCTTTGCCCTCAGCTGGCTGCCTTTGC...CATGTGGGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp GGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCAACATCAGAAATGATTACTaGACCTACCCTTTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GTTLCGYLFRASPMPPANIRNDY*TYPFCL
Trigger: GAGGCAGAAAGGGTAGGTTCAGTAATCATTTCTGAT...GTTGGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp CCCAGCCAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCATTGAGGGATTCACATaGCAGCAAGGCCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: PSQILGVLRDSHDSKAFPIEGFT*QQGLPP
Trigger: TGGGGGAAGGCCTTGCTGTCATGTGAATCCCTCAAT...GGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTGGCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp GTGTTCTCCTCTCCATCAGGCCCAGAAGCAGCAGAGATGGGGTCACCTAGGACAAGCTTCCAAAGCCCCTaGAAACCCAGCCAGATACTA +
Preference number: 4 (lower is better)
Translates to: VFSSPSGPEAAEMGSPRTSFQSP*KPSQIL
Trigger: TAGTATCTGGCTGGGTTTTCAGGGGCTTTGGAAGCT...TGTCCTAGGTGACCCCATCTCTGCTGCTTCTGGGCCTGATGGAGAGGAGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp GTGTTCTCCTCTCCATCAGGCCCAGAAGCAGCAGAGATGGGGTCACCTAGGACACCGTCTCAGAGCAGATaGTCTCCTCTCCTTAAGCTT +
Preference number: 4 (lower is better)
Translates to: VFSSPSGPEAAEMGSPRTPSQSR*SPLLKL
Trigger: AAGCTTAAGGAGAGGAGAGCATCTGCTCTGAGACGG...TGTCCTAGGTGACCCCATCTCTGCTGCTTCTGGGCCTGATGGAGAGGAGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp AAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGATTCCCAGGCAGGCAGAATaGTCCCGAGTTGGCATGTCT +
Preference number: 4 (lower is better)
Translates to: KLTPQGVEPALQQISEMIPRQAE*SRVGMS
Trigger: AGACATGCCAACTCGGGAGCATTCTGCCTGCCTGGG...AATCATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp TGGCAGCGGAAATGGTCATTCCAAATCTTAAGGAAGGTGACGCGGAACTTCTGGAGGCACCCTAGCACCTaGTATGGCCTGGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: WQRKWSFQILRKVTRNFWRHPST*YGLGSR
Trigger: TCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCT...CCAGAAGTTCCGCGTCACCTTCCTTAAGATTTGGAATGACCATTTCCGCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR TCA 90 bp TGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCCTTCCCACACAAAGAAGTTaGAGTAGACCATGTACTCCA +
Preference number: 4 (lower is better)
Translates to: WGLRTLLPLDTWSLRRTLPTQRS*SRPCTP
Trigger: TGGAGTACATGGTCTACTTCAACTTCTTTGTGTGGG...AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp AACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCAGACCCACACAAAGAAGTTaGAGTAGACCATGTACTCCA +
Preference number: 4 (lower is better)
Translates to: NTESLQTLPRPPRSQAGRPTQRS*SRPCTP
Trigger: TGGAGTACATGGTCTACTTCAACTTCTTTGTGTGGG...TCTGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp GATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCTAAGACCGACACCTTCTTGTTaGGCTGCTTGCGGATTAGGT +
Preference number: 4 (lower is better)
Translates to: DALLSLSLVLGLHHQHLRPTPSC*AACGLG
Trigger: ACCTAATCCGCAAGCAGCTCAACAAGAAGGTGTCGG...TCTTAGATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp TTGGGAGCCAGGGCACACCCAATTTCCAACAGAGGGAAGGGCTTGGAAGCAAGTAGCTTCCAAAGCCCCTaGAAACCCAGCCAGATACTA +
Preference number: 4 (lower is better)
Translates to: LGARAHPISNRGKGLEASSFQSP*KPSQIL
Trigger: TAGTATCTGGCTGGGTTTTCAGGGGCTTTGGAAGCT...ACTTGCTTCCAAGCCCTTCCCTCTGTTGGAAATTGGGTGTGCCCTGGCTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp AAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGATTCCTGAAGCTCTGGACTaGTCATGGGATGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: KLTPQGVEPALQQISEMIPEALD*SWDGQA
Trigger: TGCCTGACCATCCCATGAGCAGTCCAGAGCTTCAGG...AATCATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp AGAGCAGATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATTACAGAACAGGCCAGTaGATCCTCAACCTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RADALLSLSLVLGLHHQHYRTGQ*ILNLSP
Trigger: AGGAGAGAGGTTGAGGATGCACTGGCCTGTTCTGTA...ATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATCTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp GATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCTAAGAGGAAGGCATAGACAATaGGGTTCATGGCCGAGTTGC +
Preference number: 4 (lower is better)
Translates to: DALLSLSLVLGLHHQHLRGRHRQ*GSWPSC
Trigger: GCAACTCGGCCATGAACCCCATTGTCTATGCCTTCC...TCTTAGATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR TCA 90 bp GGGAGCCAGGGCACACCCAATTTCCAACAGAGGGAAGGGCTTGGAAGCAAGTCCATCAGAAATGATTACTaGACCTACCCTTTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GSQGTPNFQQREGLGSKSIRNDY*TYPFCL
Trigger: GAGGCAGAAAGGGTAGGTTCAGTAATCATTTCTGAT...GGACTTGCTTCCAAGCCCTTCCCTCTGTTGGAAATTGGGTGTGCCCTGGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR GCA 90 bp GGGAGCCAGGGCACACCCAATTTCCAACAGAGGGAAGGGCTTGGAAGCAAGTCCCATGAAACCAGTCCCTaGATCTTCTCATCCCATATT +
Preference number: 4 (lower is better)
Translates to: GSQGTPNFQQREGLGSKSHETSP*IFSSHI
Trigger: AATATGGGATGAGAAGATGCAGGGACTGGTTTCATG...GGACTTGCTTCCAAGCCCTTCCCTCTGTTGGAAATTGGGTGTGCCCTGGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS-3UTR CCA 90 bp CAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCCACATGGGAAGGCATAGACAATaGGGTTCATGGCCGAGTTGC +
Preference number: 4 (lower is better)
Translates to: QILGVLRDSHDSKAFPHMGRHRQ*GSWPSC
Trigger: GCAACTCGGCCATGAACCCCATTGTCTATGCCTTCC...CATGTGGGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp CAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCCACATGAGGGACCACACTCTGTaGGTATCTCTTCAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: QILGVLRDSHDSKAFPHMRDHTL*VSLQSL
Trigger: GAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCT...CATGTGGGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp CAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCCACATGACAGAGGGAAGGGCTTaGAAGCAAGTCCTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: QILGVLRDSHDSKAFPHMTEGRA*KQVLEL
Trigger: CAACTCCAGGACTTGCTTCCAAGCCCTTCCCTCTGT...CATGTGGGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CCA 90 bp CCCAGCCAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCTTTTTATTAGTCACATaGGCCTCCCTTGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PSQILGVLRDSHDSKAFPFLLVT*ASLGSQ
Trigger: CTGGCTCCCAAGGGAGGCCCATGTGACTAATAAAAA...GGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTGGCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR TCA 90 bp ACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGCCCACACAAAGAAGTTaGAGTAGACCATGTACTCCA +
Preference number: 4 (lower is better)
Translates to: TKLTPQGVEPALQQISEMPTQRS*SRPCTP
Trigger: TGGAGTACATGGTCTACTTCAACTTCTTTGTGTGGG...CATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CCA 90 bp CAGCGGAAATGGTCATTCCAAATCTTAAGGAAGGTGACGCGGAACTTCTGGATGATGGGAGGTGCAGGCTaGCAGCGGAAATGGTCATTC +
Preference number: 4 (lower is better)
Translates to: QRKWSFQILRKVTRNFWMMGGAG*QRKWSF
Trigger: GAATGACCATTTCCGCTGCCAGCCTGCACCTCCCAT...CATCCAGAAGTTCCGCGTCACCTTCCTTAAGATTTGGAATGACCATTTCCGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR TCA 90 bp AGAGCAGATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATATCAGAAATGATTACTaGACCTACCCTTTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RADALLSLSLVLGLHHQHIRNDY*TYPFCL
Trigger: GAGGCAGAAAGGGTAGGTTCAGTAATCATTTCTGAT...ATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATCTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR GCA 90 bp GATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCTAAGACTAAGATTTAGTGCTTaGCATGCATTGGCTTATTCT +
Preference number: 4 (lower is better)
Translates to: DALLSLSLVLGLHHQHLRLRFSA*HALAYS
Trigger: AGAATAAGCCAATGCATGGCAAGCACTAAATCTTAG...TCTTAGATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS CCA 90 bp CTGGGGAAGCCAAGGCCGGCCGGTAAGCTCCAGAGGGATGGTAGCTaGCTGGGACTCGACTCGGGCGCCTGCGGCTCTGTCGCCCCCGGC +
Preference number: 5 (lower is better)
Translates to: LGKPRPAGKLQRDGS*LGLDSGACGSVAPG
Trigger: GCCGGGGGCGACAGAGCCGCAGGCGCCCGAGTCGAGTCCCAGCCAGCTACCATCCCTCTGGAGCTTACCGGCCGGCCTTGGCTTCCCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337894.9
ENST00000367236.8
ENST00000640524.1
CDS-3UTR CAA 90 bp CCCACCACGAAGGAGAGGATCCAGCAGCCGGCTATGGCCACCGCCGCCCTCCGGCCCTCCGTAGGACCCTaGCCCTCCCAGGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: PTTKERIQQPAMATAALRPSVGP*PSQASC
Trigger: GCAGGAGGCCTGGGAGGGCAAGGGTCCTACGGAGGG...CCGGAGGGCGGCGGTGGCCATAGCCGGCTGCTGGATCCTCTCCTTCGTGGTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS GCA 90 bp GCAAGCACCATCCTGCCTGCTGGCCGGCAGGGGTCCCAGAGGCAGTaGCCAAAGTTCCAGGGAACAGAGCTCCGGGCCGCGCGCGGTAGG +
Preference number: 5 (lower is better)
Translates to: ASTILPAGRQGSQRQ*PKFQGTELRAARGR
Trigger: CCTACCGCGCGCGGCCCGGAGCTCTGTTCCCTGGAACTTTGGGCACTGCCTCTGGGACCCCTGCCGGCCAGCAGGCAGGATGGTGCTTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
CDS CCA 90 bp GCGGCCTGGAAAGCTGAGATGGAGGGCGGCATGGCGGGCACAGGCTaGGCACATCAGCAGACGGGCACCAAGGGGCACGAGGCAAGCACC +
Preference number: 5 (lower is better)
Translates to: AAWKAEMEGGMAGTG*AHQQTGTKGHEAST
Trigger: GGTGCTTGCCTCGTGCCCCTTGGTGCCCGTCTGCTGATGTGCCCAGCCTGTGCCCGCCATGCCGCCCTCCATCTCAGCTTTCCAGGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000640524.1
CDS-3UTR CAA 90 bp GGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCTCCGTAGGACCCTaGCCCTCCCAGGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GQAQGDPWDSGHVRTGLRPSVGP*PSQASC
Trigger: GCAGGAGGCCTGGGAGGGCAAGGGTCCTACGGAGGG...TCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp CCCCTGCCTCACCGCAGAAGCCCAAGCACCTTCTCCCAGCCCAGGTGGCTCCTCTCACATGGGCCTCCCTaGGGAGCCAGGGCACACCCA +
Preference number: 5 (lower is better)
Translates to: PLPHRRSPSTFSQPRWLLSHGPP*GARAHP
Trigger: TGGGTGTGCCCTGGCTCCCAAGGGAGGCCCATGTGA...GAGGAGCCACCTGGGCTGGGAGAAGGTGCTTGGGCTTCTGCGGTGAGGCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CAA 90 bp GAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCACCCTCCGTAGGACCCTaGCCCTCCCAGGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: EGPHSVGISSEPPPCPQPPSVGP*PSQASC
Trigger: GCAGGAGGCCTGGGAGGGCAAGGGTCCTACGGAGGG...TGGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp GAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGGCCACCTCGTGGCTGTTaGAGGCCAGCACCTACCGCA +
Preference number: 5 (lower is better)
Translates to: EDWTETPLDVGWWERKAGPPRGC*RPAPTA
Trigger: TGCGGTAGGTGCTGGCCTCAAACAGCCACGAGGTGG...CCCCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp GTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGTCACATGGGCCTCCCTaGGGAGCCAGGGCACACCCA +
Preference number: 5 (lower is better)
Translates to: VRTGLRPHWMWAGGSGRRSHGPP*GARAHP
Trigger: TGGGTGTGCCCTGGCTCCCAAGGGAGGCCCATGTGA...CCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS CCA 90 bp CCCCACACCTCGACGCCTTCAGCAGCCGCTAGCTCCAGGGATTCCTaGGGAAGCCAAGGCCGGCCGGTAAGCTCCAGAGGGATGGTAGCT +
Preference number: 5 (lower is better)
Translates to: PHTSTPSAAASSRDS*GSQGRPVSSRGMVA
Trigger: AGCTACCATCCCTCTGGAGCTTACCGGCCGGCCTTGGCTTCCCCAGGAATCCCTGGAGCTAGCGGCTGCTGAAGGCGTCGAGGTGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337894.9
ENST00000367236.8
ENST00000640524.1
CDS-3UTR CAA 90 bp GCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGGTAAGGATGCTGGGCTaGTGGCAGGACGGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: ASTYRTKLTPQGVEPALQVRMLG*WQDGQK
Trigger: CTTCTGCCCGTCCTGCCACAAGCCCAGCATCCTTAC...CTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp ACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATACCCTCCGTAGGACCCTaGCCCTCCCAGGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TYRTKLTPQGVEPALQQIPSVGP*PSQASC
Trigger: GCAGGAGGCCTGGGAGGGCAAGGGTCCTACGGAGGG...TATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS TCA 90 bp CCGCCCAGATCACCAGCACGTTCCCGGGCACAGAGACCAGGGCGATaGGCACCTCGATGCCGATGTAGGCGGCCTGGAAAGCTGAGATGG +
Preference number: 5 (lower is better)
Translates to: PPRSPARSRAQRPGR*APRCRCRRPGKLRW
Trigger: CCATCTCAGCTTTCCAGGCCGCCTACATCGGCATCGAGGTGCTCATCGCCCTGGTCTCTGTGCCCGGGAACGTGCTGGTGATCTGGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000640524.1
CDS-3UTR CAA 90 bp GTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGTCTGTGGCCCAATGTaGATGAGGATGGCGAGGGGG +
Preference number: 5 (lower is better)
Translates to: VRTGLRPHWMWAGGSGRRVCGPM*MRMARG
Trigger: CCCCCTCGCCATCCTCATCAACATTGGGCCACAGAC...CCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp GTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGTAAGGATGCTGGGCTaGTGGCAGGACGGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: VRTGLRPHWMWAGGSGRRVRMLG*WQDGQK
Trigger: CTTCTGCCCGTCCTGCCACAAGCCCAGCATCCTTAC...CCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CAA 90 bp CAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCCACCTCGTGGCTGTTaGAGGCCAGCACCTACCGCA +
Preference number: 5 (lower is better)
Translates to: QRACEDWTETPLDVGWWEPPRGC*RPAPTA
Trigger: TGCGGTAGGTGCTGGCCTCAAACAGCCACGAGGTGG...CTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp GGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCCCACCTCGTGGCTGTTaGAGGCCAGCACCTACCGCA +
Preference number: 5 (lower is better)
Translates to: GGTTLCGYLFRASPMPPAPPRGC*RPAPTA
Trigger: TGCGGTAGGTGCTGGCCTCAAACAGCCACGAGGTGG...GGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS GCA 90 bp ACCAAAGCTGGCAGAGCTCCCGGCTGCCTGACTGTTCTGTCCAAGTaGCCCCACACCTCGACGCCTTCAGCAGCCGCTAGCTCCAGGGAT +
Preference number: 5 (lower is better)
Translates to: TKAGRAPGCLTVLSK*PHTSTPSAAASSRD
Trigger: ATCCCTGGAGCTAGCGGCTGCTGAAGGCGTCGAGGTGTGGGGGCACTTGGACAGAACAGTCAGGCAGCCGGGAGCTCTGCCAGCTTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
ENST00000640524.1
CDS-3UTR CAA 90 bp CCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGTCTGTGGCCCAATGTaGATGAGGATGGCGAGGGGG +
Preference number: 5 (lower is better)
Translates to: PWDSGHVRTGLRPHWMWAVCGPM*MRMARG
Trigger: CCCCCTCGCCATCCTCATCAACATTGGGCCACAGAC...AGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp TGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGGTCTGTGGCCCAATGTaGATGAGGATGGCGAGGGGG +
Preference number: 5 (lower is better)
Translates to: CLRPAPTAPSSLPRAWSQVCGPM*MRMARG
Trigger: CCCCCTCGCCATCCTCATCAACATTGGGCCACAGAC...CTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp GCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCGGGGTCACCACCATCTaGTACCGGAGAGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: AGSGRPLGQRACEDWTETGVTTI*YRRGIL
Trigger: CAAGATCCCTCTCCGGTACAAGATGGTGGTGACCCC...GGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CAA 90 bp GTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGTTCTCGAACTCGCACTaGATCACGGGCTCCCCCATG +
Preference number: 5 (lower is better)
Translates to: VRTGLRPHWMWAGGSGRRFSNSH*ITGSPM
Trigger: CATGGGGGAGCCCGTGATCAAGTGCGAGTTCGAGAA...CCGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CAA 90 bp GCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCATGAGGGCCAGCGACTaGGCGATCTTCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: AGSGRPLGQRACEDWTETMRASD*AIFSSF
Trigger: GAAGGAGCTGAAGATCGCCAAGTCGCTGGCCCTCAT...GGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CAA 90 bp GGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCAATGAGGGCCAGCGACTaGGCGATCTTCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GSGRPLGQRACEDWTETPMRASD*AIFSSF
Trigger: GAAGGAGCTGAAGATCGCCAAGTCGCTGGCCCTCAT...TGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CAA 90 bp GGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCGGGTTCATGGCCGAGTaGCCGTGCGTGAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: GGTTLCGYLFRASPMPPAGFMAE*PCVRKM
Trigger: CATCTTCCTCACGCACGGCAACTCGGCCATGAACCC...GGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CAA 90 bp TCGTGGCTGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGCTCCTCTCCTTAAGCTaGGTCCTGGGGCTGCACCAC +
Preference number: 5 (lower is better)
Translates to: SWLFEASTYRTKLTPQGVLLSLS*VLGLHH
Trigger: GTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAG...CACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp GAGCACCCTCCTCTTCCAGGGCCCGGTGAGTGGGGAGGTGCATGTCTTTTGCTCGGGGTCACCACCATCTaGTACCTGGGGGAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: EHPPLPGPGEWGGACLLLGVTTI*YLGERR
Trigger: CCTCCTCTCCCCCAGGTACAAGATGGTGGTGACCCC...GAGCAAAAGACATGCACCTCCCCACTCACCGGGCCCTGGAAGAGGAGGGTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CAA 90 bp TGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGGGGTCACCACCATCTaGTACCATCCTGCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: CEDWTETPLDVGWWERKAGVTTI*YHPACW
Trigger: CCAGCAGGCAGGATGGTACAAGATGGTGGTGACCCC...CGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618295.1
CDS GCA 90 bp CCCTCACCCCTCACGGCACAGCATCTCTTCTGCAGGACTTCAGAATaGCCCCTCTGGGATCTCCCAAAGCAGTCGGTAGCCCTGGCACCC +
Preference number: 5 (lower is better)
Translates to: PSPLTAQHLFCRTSE*PLWDLPKQSVALAP
Trigger: GGGTGCCAGGGCTACCGACTGCTTTGGGAGATCCCAGAGGGGGCATTCTGAAGTCCTGCAGAAGAGATGCTGTGCCGTGAGGGGTGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS-3UTR CAA 90 bp GGGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGTCCACCGCACTCAGATaGTTCCAGCCAAACATAGGG +
Preference number: 5 (lower is better)
Translates to: GAGSGRPLGQRACEDWTESTALR*FQPNIG
Trigger: CCCTATGTTTGGCTGGAACAATCTGAGTGCGGTGGA...CTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CAA 90 bp TGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGATGAGGGCCAGCGACTaGGCGATCTTCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: CLRPAPTAPSSLPRAWSQMRASD*AIFSSF
Trigger: GAAGGAGCTGAAGATCGCCAAGTCGCTGGCCCTCAT...CTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp AGGAGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGGGGTTCATGGCCGAGTaGCCGTGCGTGAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: RRAGTLAPGMAWGPESSEGFMAE*PCVRKM
Trigger: CATCTTCCTCACGCACGGCAACTCGGCCATGAACCC...CTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp TGGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCGGGTTCATGGCCGAGTaGCCGTGCGTGAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: WRDHTLWVSLQSLPHAPSGFMAE*PCVRKM
Trigger: CATCTTCCTCACGCACGGCAACTCGGCCATGAACCC...GCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CAA 90 bp AGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGGTGCTCCTCTCCTTAAGCTaGGTCCTGGGGCTGCACCAC +
Preference number: 5 (lower is better)
Translates to: RAGTLAPGMAWGPESSEVLLSLS*VLGLHH
Trigger: GTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAG...CACCTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS CCA 90 bp GAGGACCGGACAGGCAACCATGAGGCAGGTGTGGAAGTAGGTCTGTaGCCCAATGTTGATGAGGATGGCGAGGGGGATGACCAGGGCACC +
Preference number: 5 (lower is better)
Translates to: EDRTGNHEAGVEVGL*PNVDEDGEGDDQGT
Trigger: GGTGCCCTGGTCATCCCCCTCGCCATCCTCATCAACATTGGGCCACAGACCTACTTCCACACCTGCCTCATGGTTGCCTGTCCGGTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000640524.1
CDS-3UTR CAA 90 bp GGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCATCCACCGCACTCAGATaGTTCCAGCCAAACATAGGG +
Preference number: 5 (lower is better)
Translates to: GSGRPLGQRACEDWTETPSTALR*FQPNIG
Trigger: CCCTATGTTTGGCTGGAACAATCTGAGTGCGGTGGA...TGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CAA 90 bp TGGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCTTCTCGAACTCGCACTaGATCACGGGCTCCCCCATG +
Preference number: 5 (lower is better)
Translates to: WRDHTLWVSLQSLPHAPSFSNSH*ITGSPM
Trigger: CATGGGGGAGCCCGTGATCAAGTGCGAGTTCGAGAA...GCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CAA 90 bp TGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGCGGCCGACACCTTCTTGTaGAGCTGCTTGCGGATTAGG +
Preference number: 5 (lower is better)
Translates to: CEDWTETPLDVGWWERKAADTFL*SCLRIR
Trigger: CCTAATCCGCAAGCAGCTCAACAAGAAGGTGTCGGC...CGCCTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CAA 90 bp GGAGGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCGAGGCCGACACCTTCTaGTTGAGCTGCTTGCGGATT +
Preference number: 5 (lower is better)
Translates to: GGTTLCGYLFRASPMPPAEADTF*LSCLRI
Trigger: AATCCGCAAGCAGCTCAACAAGAAGGTGTCGGCCTC...GGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CAA 90 bp AGGTGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCGTAAGGATGCTGGGCTaGTGGCAGGACGGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: RWGLRTLLPLDTWSLRRTVRMLG*WQDGQK
Trigger: CTTCTGCCCGTCCTGCCACAAGCCCAGCATCCTTAC...GGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp GCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGGGCTCAGAACACTGTaGCCTCTAGACACCTGGTCC +
Preference number: 5 (lower is better)
Translates to: ACEDWTETPLDVGWWERKGLRTL*PLDTWS
Trigger: GGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCC...CTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp TGGTGGGAGCGGAAGGCGGGGTCTAGTCATCAGGCCTCTCTTCTGGGAGATCCTCTCCTCTCCTTAAGCTaGGTCCTGGGGCTGCACCAC +
Preference number: 5 (lower is better)
Translates to: WWERKAGSSHQASLLGDPLLSLS*VLGLHH
Trigger: GTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAG...AGGATCTCCCAGAAGAGAGGCCTGATGACTAGACCCCGCCTTCCGCTCCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CAA 90 bp GGGCAGGCTCAGGGAGACCCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGAAGTGCTTGCCATGCATaGGCTTATTCTCCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: GQAQGDPWDSGHVRTGLRSACHA*AYSPER
Trigger: CCTCTCCGGAGAATAAGCCAATGCATGGCAAGCACT...TCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGGGTCTCCCTGAGCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS CCA 90 bp CTCACGGCACAGCATCTCTTCTGCAGGACTTCAGAATGCCCCCTCTaGGATCTCCCAAAGCAGTCGGTAGCCCTGGCACCCTCCCCCAAT +
Preference number: 5 (lower is better)
Translates to: LTAQHLFCRTSECPL*DLPKQSVALAPSPN
Trigger: ATTGGGGGAGGGTGCCAGGGCTACCGACTGCTTTGGGAGATCCCAGAGGGGGCATTCTGAAGTCCTGCAGAAGAGATGCTGTGCCGTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS-3UTR CAA 90 bp TGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGTCCACCGCACTCAGATaGTTCCAGCCAAACATAGGG +
Preference number: 5 (lower is better)
Translates to: CLRPAPTAPSSLPRAWSQSTALR*FQPNIG
Trigger: CCCTATGTTTGGCTGGAACAATCTGAGTGCGGTGGA...CTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp CCCTGGGACAGCGGGCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTTCCACCGCACTCAGATaGTTCCAGCCAAACATAGGG +
Preference number: 5 (lower is better)
Translates to: PWDSGHVRTGLRPHWMWASTALR*FQPNIG
Trigger: CCCTATGTTTGGCTGGAACAATCTGAGTGCGGTGGA...AGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGCCCGCTGTCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CAA 90 bp AGGTGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCTTCTCGAACTCGCACTaGATCACGGGCTCCCCCATG +
Preference number: 5 (lower is better)
Translates to: RWGLRTLLPLDTWSLRRTFSNSH*ITGSPM
Trigger: CATGGGGGAGCCCGTGATCAAGTGCGAGTTCGAGAA...GGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp GGGACCACACTCTGTGGGTATCTCTTCAGAGCCTCCCCCATGCCCCCAGCCAACGCCGACACCTTCTTGTaGAGCTGCTTGCGGATTAGG +
Preference number: 5 (lower is better)
Translates to: GTTLCGYLFRASPMPPANADTFL*SCLRIR
Trigger: CCTAATCCGCAAGCAGCTCAACAAGAAGGTGTCGGC...GTTGGCTGGGGGCATGGGGGAGGCTCTGAAGAGATACCCACAGAGTGTGGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CAA 90 bp GCATGTGAGGACTGGACTGAGACCCCACTGGATGTGGGCTGGTGGGAGCGGAAGGAGGCCGACACCTTCTaGTTGAGCTGCTTGCGGATT +
Preference number: 5 (lower is better)
Translates to: ACEDWTETPLDVGWWERKEADTF*LSCLRI
Trigger: AATCCGCAAGCAGCTCAACAAGAAGGTGTCGGCCTC...CTTCCGCTCCCACCAGCCCACATCCAGTGGGGTCTCAGTCCAGTCCTCACATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000618295.1
CDS-3UTR CAA 90 bp TGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCCTTGGGTTCATGGCCGAGTaGCCGTGCGTGAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: WGLRTLLPLDTWSLRRTLGFMAE*PCVRKM
Trigger: CATCTTCCTCACGCACGGCAACTCGGCCATGAACCC...AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp CCGTTGGCTGCCCAGGCCCGCTCCACCGCACTCAGATTGTTCCAGCCAAACATAGGGCTCAGAACACTGTaGCCTCTAGACACCTGGTCC +
Preference number: 5 (lower is better)
Translates to: PLAAQARSTALRLFQPNIGLRTL*PLDTWS
Trigger: GGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCC...TATGTTTGGCTGGAACAATCTGAGTGCGGTGGAGCGGGCCTGGGCAGCCAACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CAA 90 bp CAGAAGCAGCAGAGATGGGGTCACCTAGGACAGTCCAGGCCCGGCAACGGGCAGCAGAATGCTCCCGAGTaGGCATGTCTAGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: QKQQRWGHLGQSRPGNGQQNAPE*ACLVFS
Trigger: GGAGAACACTAGACATGCCAACTCGGGAGCATTCTG...CTGCCCGTTGCCGGGCCTGGACTGTCCTAGGTGACCCCATCTCTGCTGCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CAA 90 bp ACCTACCGCACCAAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATAGCCGACACCTTCTTGTaGAGCTGCTTGCGGATTAGG +
Preference number: 5 (lower is better)
Translates to: TYRTKLTPQGVEPALQQIADTFL*SCLRIR
Trigger: CCTAATCCGCAAGCAGCTCAACAAGAAGGTGTCGGC...TATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp TCAACACTGAGTCCTTACAGACACTCCCTCGTCCACCCCGTTCCCAGGCAGGCAATGAGGGCCAGCGACTaGGCGATCTTCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: STLSPYRHSLVHPVPRQAMRASD*AIFSSF
Trigger: GAAGGAGCTGAAGATCGCCAAGTCGCTGGCCCTCAT...TGCCTGCCTGGGAACGGGGTGGACGAGGGAGTGTCTGTAAGGACTCAGTGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CAA 90 bp AGAGCAGATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCCACCTCGTGGCTGTTaGAGGCCAGCACCTACCGCA +
Preference number: 5 (lower is better)
Translates to: RADALLSLSLVLGLHHQHPPRGC*RPAPTA
Trigger: TGCGGTAGGTGCTGGCCTCAAACAGCCACGAGGTGG...ATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATCTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp AGGAGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGCAGAATGCTCCCGAGTaGGCATGTCTAGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: RRAGTLAPGMAWGPESSEQNAPE*ACLVFS
Trigger: GGAGAACACTAGACATGCCAACTCGGGAGCATTCTG...CTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CAA 90 bp TTGGGAGCCAGGGCACACCCAATTTCCAACAGAGGGAAGGGCTTGGAAGCAAGTGTCTGTGGCCCAATGTaGATGAGGATGGCGAGGGGG +
Preference number: 5 (lower is better)
Translates to: LGARAHPISNRGKGLEASVCGPM*MRMARG
Trigger: CCCCCTCGCCATCCTCATCAACATTGGGCCACAGAC...ACTTGCTTCCAAGCCCTTCCCTCTGTTGGAAATTGGGTGTGCCCTGGCTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CAA 90 bp CTGAGGGCAAAGAGGAAGAGGATGAGGGCCAGCGACTTGGCGATCTTCAGCTCCGCCGACACCTTCTTGTaGAGCTGCTTGCGGATTAGG +
Preference number: 5 (lower is better)
Translates to: LRAKRKRMRASDLAIFSSADTFL*SCLRIR
Trigger: CCTAATCCGCAAGCAGCTCAACAAGAAGGTGTCGGC...GGAGCTGAAGATCGCCAAGTCGCTGGCCCTCATCCTCTTCCTCTTTGCCCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1
CDS-3UTR CAA 90 bp TCGTGGCTGTTTGAGGCCAGCACCTACCGCACCAAGCTCACTCCCCAGGGCGTGAAGCAAGTCCTGGAGTaGACACTCATGTTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: SWLFEASTYRTKLTPQGVKQVLE*TLMFRR
Trigger: CCTTCTGAACATGAGTGTCAACTCCAGGACTTGCTT...CACGCCCTGGGGAGTGAGCTTGGTGCGGTAGGTGCTGGCCTCAAACAGCCACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CAA 90 bp AAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGATTTCACATGGGCCTCCCTaGGGAGCCAGGGCACACCCA +
Preference number: 5 (lower is better)
Translates to: KLTPQGVEPALQQISEMISHGPP*GARAHP
Trigger: TGGGTGTGCCCTGGCTCCCAAGGGAGGCCCATGTGA...AATCATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CAA 90 bp GATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCTAAGAGGGTTCATGGCCGAGTaGCCGTGCGTGAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: DALLSLSLVLGLHHQHLRGFMAE*PCVRKM
Trigger: CATCTTCCTCACGCACGGCAACTCGGCCATGAACCC...TCTTAGATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp GATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCTAAGACTCCTCTCCTTAAGCTaGGTCCTGGGGCTGCACCAC +
Preference number: 5 (lower is better)
Translates to: DALLSLSLVLGLHHQHLRLLSLS*VLGLHH
Trigger: GTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAG...TCTTAGATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp AGGAGAGCAGGCACCCTAGCACCTGGTATGGCCTGGGGTCCAGAGTCCTCAGAGCAGATACTAGGGGTATaGAGGGATTCACATGACAGC +
Preference number: 5 (lower is better)
Translates to: RRAGTLAPGMAWGPESSEQILGV*RDSHDS
Trigger: GCTGTCATGTGAATCCCTCAATACCCCTAGTATCTG...CTCTGAGGACTCTGGACCCCAGGCCATACCAGGTGCTAGGGTGCCTGCTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CAA 90 bp GATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATCTAAGATTCTCGAACTCGCACTaGATCACGGGCTCCCCCATG +
Preference number: 5 (lower is better)
Translates to: DALLSLSLVLGLHHQHLRFSNSH*ITGSPM
Trigger: CATGGGGGAGCCCGTGATCAAGTGCGAGTTCGAGAA...TCTTAGATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp AGAGCAGATGCTCTCCTCTCCTTAAGCTTGGTCCTGGGGCTGCACCACCAACATGAGGCCGACACCTTCTaGTTGAGCTGCTTGCGGATT +
Preference number: 5 (lower is better)
Translates to: RADALLSLSLVLGLHHQHEADTF*LSCLRI
Trigger: AATCCGCAAGCAGCTCAACAAGAAGGTGTCGGCCTC...ATGTTGGTGGTGCAGCCCCAGGACCAAGCTTAAGGAGAGGAGAGCATCTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp TTGGGAGCCAGGGCACACCCAATTTCCAACAGAGGGAAGGGCTTGGAAGCAAGTGAGGCCGACACCTTCTaGTTGAGCTGCTTGCGGATT +
Preference number: 5 (lower is better)
Translates to: LGARAHPISNRGKGLEASEADTF*LSCLRI
Trigger: AATCCGCAAGCAGCTCAACAAGAAGGTGTCGGCCTC...ACTTGCTTCCAAGCCCTTCCCTCTGTTGGAAATTGGGTGTGCCCTGGCTCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CAA 90 bp AAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGATTGTAAGGATGCTGGGCTaGTGGCAGGACGGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: KLTPQGVEPALQQISEMIVRMLG*WQDGQK
Trigger: CTTCTGCCCGTCCTGCCACAAGCCCAGCATCCTTAC...AATCATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
CDS-3UTR CAA 90 bp CCCAGCCAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCTCCACCGCACTCAGATaGTTCCAGCCAAACATAGGG +
Preference number: 5 (lower is better)
Translates to: PSQILGVLRDSHDSKAFPSTALR*FQPNIG
Trigger: CCCTATGTTTGGCTGGAACAATCTGAGTGCGGTGGA...GGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CAA 90 bp CAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCCACATGGGGCTCAGAACACTGTaGCCTCTAGACACCTGGTCC +
Preference number: 5 (lower is better)
Translates to: QILGVLRDSHDSKAFPHMGLRTL*PLDTWS
Trigger: GGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCC...CATGTGGGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CAA 90 bp TTGGGAGCCAGGGCACACCCAATTTCCAACAGAGGGAAGGGCTTGGAAGCAAGTCAGAATGCTCCCGAGTaGGCATGTCTAGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: LGARAHPISNRGKGLEASQNAPE*ACLVFS
Trigger: GGAGAACACTAGACATGCCAACTCGGGAGCATTCTG...ACTTGCTTCCAAGCCCTTCCCTCTGTTGGAAATTGGGTGTGCCCTGGCTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CAA 90 bp TGGGGGCTCAGAACACTGTTGCCTCTAGACACCTGGTCCCTCCGTAGGACCCTTCAGATACTAGGGGTATaGAGGGATTCACATGACAGC +
Preference number: 5 (lower is better)
Translates to: WGLRTLLPLDTWSLRRTLQILGV*RDSHDS
Trigger: GCTGTCATGTGAATCCCTCAATACCCCTAGTATCTG...AAGGGTCCTACGGAGGGACCAGGTGTCTAGAGGCAACAGTGTTCTGAGCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CAA 90 bp CAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCCACATGGCCGACACCTTCTTGTaGAGCTGCTTGCGGATTAGG +
Preference number: 5 (lower is better)
Translates to: QILGVLRDSHDSKAFPHMADTFL*SCLRIR
Trigger: CCTAATCCGCAAGCAGCTCAACAAGAAGGTGTCGGC...CATGTGGGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CAA 90 bp CAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCCACATGGAGGCCGACACCTTCTaGTTGAGCTGCTTGCGGATT +
Preference number: 5 (lower is better)
Translates to: QILGVLRDSHDSKAFPHMEADTF*LSCLRI
Trigger: AATCCGCAAGCAGCTCAACAAGAAGGTGTCGGCCTC...CATGTGGGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CAA 90 bp TTGGGAGCCAGGGCACACCCAATTTCCAACAGAGGGAAGGGCTTGGAAGCAAGTCAGATACTAGGGGTATaGAGGGATTCACATGACAGC +
Preference number: 5 (lower is better)
Translates to: LGARAHPISNRGKGLEASQILGV*RDSHDS
Trigger: GCTGTCATGTGAATCCCTCAATACCCCTAGTATCTG...ACTTGCTTCCAAGCCCTTCCCTCTGTTGGAAATTGGGTGTGCCCTGGCTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CAA 90 bp CCCAGCCAGATACTAGGGGTATTGAGGGATTCACATGACAGCAAGGCCTTCCCCAAGCAAGTCCTGGAGTaGACACTCATGTTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: PSQILGVLRDSHDSKAFPKQVLE*TLMFRR
Trigger: CCTTCTGAACATGAGTGTCAACTCCAGGACTTGCTT...GGGGAAGGCCTTGCTGTCATGTGAATCCCTCAATACCCCTAGTATCTGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS-3UTR CAA 90 bp AAGCTCACTCCCCAGGGCGTGGAGCCAGCACTCCAGCAAATATCAGAAATGATTAAGCAAGTCCTGGAGTaGACACTCATGTTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: KLTPQGVEPALQQISEMIKQVLE*TLMFRR
Trigger: CCTTCTGAACATGAGTGTCAACTCCAGGACTTGCTT...AATCATTTCTGATATTTGCTGGAGTGCTGGCTCCACGCCCTGGGGAGTGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
CDS TCA 72 bp GCCTGCGGCTCTGTCGCCCCCGGCGCAGGAGCTGAGTaGCAATCGGGCTCCGCACACCGGGAGGGGGCGGGG +
Preference number: 6 (lower is better)
Translates to: ACGSVAPGAGAE*QSGSAHREGAG
Trigger: CCCCGCCCCCTCCCGGTGTGCGGAGCCCGATTGTCACTCAGCTCCTGCGCCGGGGGCGACAGAGCCGCAGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS CCA 72 bp GGCCGGCCGGTAAGCTCCAGAGGGATGGTAGCTGGCTaGGACTCGACTCGGGCGCCTGCGGCTCTGTCGCCC +
Preference number: 6 (lower is better)
Translates to: GRPVSSRGMVAG*DSTRAPAALSP
Trigger: GGGCGACAGAGCCGCAGGCGCCCGAGTCGAGTCCCAGCCAGCTACCATCCCTCTGGAGCTTACCGGCCGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337894.9
ENST00000367236.8
ENST00000640524.1
CDS GCA 72 bp ATCCTGCCTGCTGGCCGGCAGGGGTCCCAGAGGCAGTaGCCAAAGTTCCAGGGAACAGAGCTCCGGGCCGCG +
Preference number: 6 (lower is better)
Translates to: ILPAGRQGSQRQ*PKFQGTELRAA
Trigger: CGCGGCCCGGAGCTCTGTTCCCTGGAACTTTGGGCACTGCCTCTGGGACCCCTGCCGGCCAGCAGGCAGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
CDS GCA 72 bp GGCAGAGCTCCCGGCTGCCTGACTGTTCTGTCCAAGTaGCCCCACACCTCGACGCCTTCAGCAGCCGCTAGC +
Preference number: 6 (lower is better)
Translates to: GRAPGCLTVLSK*PHTSTPSAAAS
Trigger: GCTAGCGGCTGCTGAAGGCGTCGAGGTGTGGGGGCACTTGGACAGAACAGTCAGGCAGCCGGGAGCTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367236.8
ENST00000640524.1
CDS CCA 72 bp TCGACGCCTTCAGCAGCCGCTAGCTCCAGGGATTCCTaGGGAAGCCAAGGCCGGCCGGTAAGCTCCAGAGGG +
Preference number: 6 (lower is better)
Translates to: STPSAAASSRDS*GSQGRPVSSRG
Trigger: CCCTCTGGAGCTTACCGGCCGGCCTTGGCTTCCCCAGGAATCCCTGGAGCTAGCGGCTGCTGAAGGCGTCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337894.9
ENST00000367236.8
ENST00000640524.1
CDS TCA 72 bp CACCCACGGCCACATCAGCCACCGCCAGCGACACGATaGAGCAGAAGGTGGCATCCCGCAGCGCCTGGTTCA +
Preference number: 6 (lower is better)
Translates to: HPRPHQPPPATR*SRRWHPAAPGS
Trigger: TGAACCAGGCGCTGCGGGATGCCACCTTCTGCTTCATCGTGTCGCTGGCGGTGGCTGATGTGGCCGTGGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000640524.1
CDS GCA 72 bp CGGCCCAAGGTCACCAAAGCTGGCAGAGCTCCCGGCTaGCTGACTGTTCTGTCCAAGTGCCCCCACACCTCG +
Preference number: 6 (lower is better)
Translates to: RPKVTKAGRAPG*LTVLSKCPHTS
Trigger: CGAGGTGTGGGGGCACTTGGACAGAACAGTCAGGCAGCCGGGAGCTCTGCCAGCTTTGGTGACCTTGGGCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309502.7
ENST00000337894.9
CDS TCA 72 bp TCACCAGCACGTTCCCGGGCACAGAGACCAGGGCGATaGGCACCTCGATGCCGATGTAGGCGGCCTGGAAAG +
Preference number: 6 (lower is better)
Translates to: SPARSRAQRPGR*APRCRCRRPGK
Trigger: CTTTCCAGGCCGCCTACATCGGCATCGAGGTGCTCATCGCCCTGGTCTCTGTGCCCGGGAACGTGCTGGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000640524.1
CDS CCA 72 bp CTGTGTCCACTCTCTCCCTTCTCAATGCAGGACTCCTaGGAGCCCTGGTCTGGCCTCCAGCGACCCCTCACC +
Preference number: 6 (lower is better)
Translates to: LCPLSPFSMQDS*EPWSGLQRPLT
Trigger: GGTGAGGGGTCGCTGGAGGCCAGACCAGGGCTCCCAGGAGTCCTGCATTGAGAAGGGAGAGAGTGGACACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS CCA 72 bp TTCGAAGGGCCTGGTGTGTGCGCCCAGCCTCAGGACTaGACAGAGGCGCATCCTTCCTGTGTCCACTCTCTC +
Preference number: 6 (lower is better)
Translates to: FEGPGVCAQPQD*TEAHPSCVHSL
Trigger: GAGAGAGTGGACACAGGAAGGATGCGCCTCTGTCCAGTCCTGAGGCTGGGCGCACACACCAGGCCCTTCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS CCA 72 bp CAGCATCTCTTCTGCAGGACTTCAGAATGCCCCCTCTaGGATCTCCCAAAGCAGTCGGTAGCCCTGGCACCC +
Preference number: 6 (lower is better)
Translates to: QHLFCRTSECPL*DLPKQSVALAP
Trigger: GGGTGCCAGGGCTACCGACTGCTTTGGGAGATCCCAGAGGGGGCATTCTGAAGTCCTGCAGAAGAGATGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS GCA 72 bp CTCACGGCACAGCATCTCTTCTGCAGGACTTCAGAATaGCCCCTCTGGGATCTCCCAAAGCAGTCGGTAGCC +
Preference number: 6 (lower is better)
Translates to: LTAQHLFCRTSE*PLWDLPKQSVA
Trigger: GGCTACCGACTGCTTTGGGAGATCCCAGAGGGGGCATTCTGAAGTCCTGCAGAAGAGATGCTGTGCCGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367236.8
CDS CCA 72 bp CCTCACCTGCCAGCCTCACAGAGGGAGAGGAGGCTCTaGGATTCAGAACAGGCACCCTTCACACTTCTGACA +
Preference number: 6 (lower is better)
Translates to: PHLPASQRERRL*DSEQAPFTLLT
Trigger: TGTCAGAAGTGTGAAGGGTGCCTGTTCTGAATCCCAGAGCCTCCTCTCCCTCTGTGAGGCTGGCAGGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309502.7
CDS CCA 72 bp ACAGGCAACCATGAGGCAGGTGTGGAAGTAGGTCTGTaGCCCAATGTTGATGAGGATGGCGAGGGGGATGAC +
Preference number: 6 (lower is better)
Translates to: TGNHEAGVEVGL*PNVDEDGEGDD
Trigger: GTCATCCCCCTCGCCATCCTCATCAACATTGGGCCACAGACCTACTTCCACACCTGCCTCATGGTTGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309502.7
ENST00000337894.9
ENST00000367235.1
ENST00000367236.8
ENST00000640524.1
CDS GCA 72 bp TCCACCCCCACACTCAGCTCCGCATTCCACAGCTTGTaGTTCCACATTAGAAAGTCCTTCCCAGAGTCTAAC +
Preference number: 6 (lower is better)
Translates to: STPTLSSAFHSL*FHIRKSFPESN
Trigger: GTTAGACTCTGGGAAGGACTTTCTAATGTGGAAGCACAAGCTGTGGAATGCGGAGCTGAGTGTGGGGGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472535.1
CDS CAA 90 bp CCAAAGAAAGAGTCCACCCCCACACTCAGCTCCGCATTCCACAGCTaGTGCTTCCACATTAGAAAGTCCTTCCCAGAGTCTAACTTCAGT +
Preference number: 6 (lower is better)
Translates to: PKKESTPTLSSAFHS*CFHIRKSFPESNFS
Trigger: ACTGAAGTTAGACTCTGGGAAGGACTTTCTAATGTGGAAGCACAAGCTGTGGAATGCGGAGCTGAGTGTGGGGGTGGACTCTTTCTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472535.1
CDS GCA 72 bp CGAGGGCTGAGTCTTCAGGATCTAAGATTTAGTGCTTaGCATGCATTGGCTTATTCTCCGGAGAGGGATCTT +
Preference number: 6 (lower is better)
Translates to: RGLSLQDLRFSA*HALAYSPERDL
Trigger: AAGATCCCTCTCCGGAGAATAAGCCAATGCATGGCAAGCACTAAATCTTAGATCCTGAAGACTCAGCCCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367235.1