RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000128165

Ensembl transcript IDs: ENST00000395737.2, ENST00000395738.2

Found 546 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTGTCTGCAGCTCCGAGGGACTGGGCTTCAGATGGGGCTCAGCTaGAGCTCTGGACGGGGGCACAGCACCCTGGCTGGGATGGGCAGG +
Preference number: 1 (lower is better)
Translates to: CCLQLRGTGLQMGLS*SSGRGHSTLAGMGR
Trigger: CCTGCCCATCCCAGCCAGGGTGCTGTGCCCCCGTCCAGAGCTGCAGCTGAGCCCCATCTGAAGCCCAGTCCCTCGGAGCTGCAGACAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 90 bp CACGGGGCCTGGCCGAGCGGAGATTTTGGCCAGAGCAGCTGGAAGTaGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGG +
Preference number: 1 (lower is better)
Translates to: HGAWPSGDFGQSSWK*VQVLLGLRVMVSGG
Trigger: CCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCACTTCCAGCTGCTCTGGCCAAAATCTCCGCTCGGCCAGGCCCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR TCA 90 bp AGGGCCTCGTGGAGTACAGGTCAGTTACGTGGACTCGGCAATCCCTaGGCTCGGGGAGCAAGCACAGGGGCGGCGCCTGGGTGGGCGCTT +
Preference number: 1 (lower is better)
Translates to: RASWSTGQLRGLGNP*ARGASTGAAPGWAL
Trigger: AAGCGCCCACCCAGGCGCCGCCCCTGTGCTTGCTCCCCGAGCTCAGGGATTGCCGAGTCCACGTAACTGACCTGTACTCCACGAGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR TCA 90 bp GGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTaGTTTCGCACCCGAGGCGACACGGAGGGTTACAGCAGGCGGCCT +
Preference number: 1 (lower is better)
Translates to: GAGAAGPPRDGVRWV*FRTRGDTEGYSRRP
Trigger: AGGCCGCCTGCTGTAACCCTCCGTGTCGCCTCGGGTGCGAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 90 bp GCTCCCCCTCCTGTCCCACAGGCAGGCACGTGGAAGGGCTGGTTGTaGATGAGAGCAGGAACAGCCCAGGCACAAGGCCGGGCTTCAGTC +
Preference number: 1 (lower is better)
Translates to: APPPVPQAGTWKGWL*MRAGTAQAQGRASV
Trigger: GACTGAAGCCCGGCCTTGTGCCTGGGCTGTTCCTGCTCTCATGCACAACCAGCCCTTCCACGTGCCTGCCTGTGGGACAGGAGGGGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 90 bp AGGAGGGAACACTTGGCCCTGACCACAGGCAGGCCCCAGACGGGGTaGCAAGCTGGACTTTGCCCAGGCAGGAGAGGAGACGTCTGGGAG +
Preference number: 1 (lower is better)
Translates to: RREHLALTTGRPQTG*QAGLCPGRRGDVWE
Trigger: CTCCCAGACGTCTCCTCTCCTGCCTGGGCAAAGTCCAGCTTGGCACCCCGTCTGGGGCCTGCCTGTGGTCAGGGCCAAGTGTTCCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 90 bp CCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCATGGGCCCTaGAGGCATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAG +
Preference number: 1 (lower is better)
Translates to: PPTPRPPTQLPMHGP*RHGGHRENKVPAAE
Trigger: CTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCATGCCTGCAGGGCCCATGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 90 bp TCACGTGCTCAGCATGCACTGGCCAGAGGGATGCAGACAGGTGCCTaGGAGGAGGCTACGGCCATCGCCCCGAAAGCAGGTGGTGCCTGG +
Preference number: 1 (lower is better)
Translates to: SRAQHALARGMQTGA*EEATAIAPKAGGAW
Trigger: CCAGGCACCACCTGCTTTCGGGGCGATGGCCGTAGCCTCCTCCCAGGCACCTGTCTGCATCCCTCTGGCCAGTGCATGCTGAGCACGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTaGAGCGTGGCCAGGGAAGTCTGGGAACAGCAGTCGGCTGGGGCA +
Preference number: 1 (lower is better)
Translates to: GGHRENKVPAAELAS*SVAREVWEQQSAGA
Trigger: TGCCCCAGCCGACTGCTGTTCCCAGACTTCCCTGGCCACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 90 bp GCCACAGAGTGTGTCAGGCTCTGGGAGAGGGGCCTCACGGAGAGTTaGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACT +
Preference number: 1 (lower is better)
Translates to: ATECVRLWERGLTES*SRHGTANTQAANAT
Trigger: AGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTCTCCCAGAGCCTGACACACTCTGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR TCA 90 bp CCCCTCCTGTCCCACAGGCAGGCACGTGGAAGGGCTGGTTGTGCATaGGAGCAGGAACAGCCCAGGCACAAGGCCGGGCTTCAGTCTGAC +
Preference number: 1 (lower is better)
Translates to: PLLSHRQARGRAGCA*EQEQPRHKAGLQSD
Trigger: GTCAGACTGAAGCCCGGCCTTGTGCCTGGGCTGTTCCTGCTCTCATGCACAACCAGCCCTTCCACGTGCCTGCCTGTGGGACAGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 90 bp CCAACACGGGTAGGTCACGTGCTCAGCATGCACTGGCCAGAGGGATaGAGACAGGTGCCTGGGAGGAGGCTACGGCCATCGCCCCGAAAG +
Preference number: 1 (lower is better)
Translates to: PTRVGHVLSMHWPEG*RQVPGRRLRPSPRK
Trigger: CTTTCGGGGCGATGGCCGTAGCCTCCTCCCAGGCACCTGTCTGCATCCCTCTGGCCAGTGCATGCTGAGCACGTGACCTACCCGTGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 90 bp CCATGCATGGGCCCTGCAGGCATGGAGGACACCGTGAGAACAAAGTaGCCGCGGCAGAGCTGGCGTCTTGGAGCGTGGCCAGGGAAGTCT +
Preference number: 1 (lower is better)
Translates to: PCMGPAGMEDTVRTK*PRQSWRLGAWPGKS
Trigger: AGACTTCCCTGGCCACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCATGCCTGCAGGGCCCATGCATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 90 bp TGGAGTCTCCATGGCCACCTCGGTCTGGGCTCCAGGGTTGGCAGCTaGAGCCACAGAGGTCCCTTCATGACCTCTGGAGGGCCACCATCC +
Preference number: 1 (lower is better)
Translates to: WSLHGHLGLGSRVGS*SHRGPFMTSGGPPS
Trigger: GGATGGTGGCCCTCCAGAGGTCATGAAGGGACCTCTGTGGCTCCAGCTGCCAACCCTGGAGCCCAGACCGAGGTGGCCATGGAGACTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 90 bp ACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTaGCCAGGGAAGTCTGGGAACAGCAGTCGGCTGGGGCAGGAGAGA +
Preference number: 1 (lower is better)
Translates to: TVRTKCPRQSWRLGA*PGKSGNSSRLGQER
Trigger: TCTCTCCTGCCCCAGCCGACTGCTGTTCCCAGACTTCCCTGGCCACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 90 bp GCAGGCATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTaGCGTCTTGGAGCGTGGCCAGGGAAGTCTGGGAACAGCAGTCGG +
Preference number: 1 (lower is better)
Translates to: AGMEDTVRTKCPRQS*RLGAWPGKSGNSSR
Trigger: CCGACTGCTGTTCCCAGACTTCCCTGGCCACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCATGCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR TCA 90 bp TGCATGAGAGCAGGAACAGCCCAGGCACAAGGCCGGGCTTCAGTCTaGCTGGACCAGCAGCGGAGGGGCCACTTCTGGCCAGTTCAGCCT +
Preference number: 1 (lower is better)
Translates to: CMRAGTAQAQGRASV*LDQQRRGHFWPVQP
Trigger: AGGCTGAACTGGCCAGAAGTGGCCCCTCCGCTGCTGGTCCAGTCAGACTGAAGCCCGGCCTTGTGCCTGGGCTGTTCCTGCTCTCATGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 90 bp CAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATaGATGGGCCCTGCAGGCATGGAGGACACCGTGAGAACAAAGTGC +
Preference number: 1 (lower is better)
Translates to: QARNRQHPGRQRNFP*MGPAGMEDTVRTKC
Trigger: GCACTTTGTTCTCACGGTGTCCTCCATGCCTGCAGGGCCCATGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 90 bp CAGGTATTGTTGCTGCAGGACCTGCTGTCTGCAGCTCCGAGGGACTaGGCTTCAGATGGGGCTCAGCTGCAGCTCTGGACGGGGGCACAG +
Preference number: 1 (lower is better)
Translates to: QVLLLQDLLSAAPRD*ASDGAQLQLWTGAQ
Trigger: CTGTGCCCCCGTCCAGAGCTGCAGCTGAGCCCCATCTGAAGCCCAGTCCCTCGGAGCTGCAGACAGCAGGTCCTGCAGCAACAATACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 90 bp AGACCTCACCTGACCCAGTGCTTCTCCCAGGGAGCTGGCCTTGACTaGCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCAATC +
Preference number: 1 (lower is better)
Translates to: RPHLTQCFSQGAGLD*LAVRPITLTTFAAI
Trigger: GATTGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGCTCCCTGGGAGAAGCACTGGGTCAGGTGAGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 90 bp CGTGTGCAAAGCCGTGCAGGTATTGTTGCTGCAGGACCTGCTGTCTaGAGCTCCGAGGGACTGGGCTTCAGATGGGGCTCAGCTGCAGCT +
Preference number: 1 (lower is better)
Translates to: RVQSRAGIVAAGPAV*SSEGLGFRWGSAAA
Trigger: AGCTGCAGCTGAGCCCCATCTGAAGCCCAGTCCCTCGGAGCTGCAGACAGCAGGTCCTGCAGCAACAATACCTGCACGGCTTTGCACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 90 bp CCATCGCCCCGAAAGCAGGTGGTGCCTGGGTCAGGAGAAGGTGTCTaGATAGGTTCAGGAGGTGGGACCGGGTGGGATTCAGAGGAAGGT +
Preference number: 1 (lower is better)
Translates to: PSPRKQVVPGSGEGV*IGSGGGTGWDSEEG
Trigger: ACCTTCCTCTGAATCCCACCCGGTCCCACCTCCTGAACCTATCCAGACACCTTCTCCTGACCCAGGCACCACCTGCTTTCGGGGCGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 90 bp AGGTTTACGTGTGCAAAGCCGTGCAGGTATTGTTGCTGCAGGACCTaGTGTCTGCAGCTCCGAGGGACTGGGCTTCAGATGGGGCTCAGC +
Preference number: 1 (lower is better)
Translates to: RFTCAKPCRYCCCRT*CLQLRGTGLQMGLS
Trigger: GCTGAGCCCCATCTGAAGCCCAGTCCCTCGGAGCTGCAGACAGCAGGTCCTGCAGCAACAATACCTGCACGGCTTTGCACACGTAAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 90 bp CCAGCACTGCGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTaGAGGTATTGTTGCTGCAGGACCTGCTGTCTGCAGCTCCGAGGG +
Preference number: 1 (lower is better)
Translates to: PALRVDQPRFTCAKP*RYCCCRTCCLQLRG
Trigger: CCCTCGGAGCTGCAGACAGCAGGTCCTGCAGCAACAATACCTGCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACGCAGTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 90 bp GACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCAGGTATTGTTGCTaGAGGACCTGCTGTCTGCAGCTCCGAGGGACTGGGCTTCAGATG +
Preference number: 1 (lower is better)
Translates to: DQPRFTCAKPCRYCC*RTCCLQLRGTGLQM
Trigger: CATCTGAAGCCCAGTCCCTCGGAGCTGCAGACAGCAGGTCCTGCAGCAACAATACCTGCACGGCTTTGCACACGTAAACCTAGGCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 90 bp GTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCAGGTATTGTTaGTGCAGGACCTGCTGTCTGCAGCTCCGAGGGACTGGGCTTCAG +
Preference number: 1 (lower is better)
Translates to: VDQPRFTCAKPCRYC*CRTCCLQLRGTGLQ
Trigger: CTGAAGCCCAGTCCCTCGGAGCTGCAGACAGCAGGTCCTGCAGCAACAATACCTGCACGGCTTTGCACACGTAAACCTAGGCTGGTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 90 bp GTGAAGATCAGAGTTCTGGGCTTCAGGGGTCAGGCAAGAGGGCTGTaGGCAGCTGACCTGACTCAACAAGATCCTGGCACAGCTGAGCTG +
Preference number: 1 (lower is better)
Translates to: VKIRVLGFRGQARGL*AADLTQQDPGTAEL
Trigger: CAGCTCAGCTGTGCCAGGATCTTGTTGAGTCAGGTCAGCTGCCCACAGCCCTCTTGCCTGACCCCTGAAGCCCAGAACTCTGATCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR TCA 90 bp AAATTAAATGCTCAGTGTTCGCTAAATAGCAGAAGGAGCCCTTTCTaGACCCCGTGTTCTGCTGGACGGTTGAGAGGCTCCAGTGGCAGG +
Preference number: 1 (lower is better)
Translates to: KLNAQCSLNSRRSPF*TPCSAGRLRGSSGR
Trigger: CCTGCCACTGGAGCCTCTCAACCGTCCAGCAGAACACGGGGTTCAGAAAGGGCTCCTTCTGCTATTTAGCGAACACTGAGCATTTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp AGCAAGCACAGGGGCGGCGCCTGGGTGGGCGCTTCCAGGACCCTCCCCCTTGGACAGATGGGGCTCAGCTaGAGCTCTGGACGGGGGCAC +
Preference number: 2 (lower is better)
Translates to: SKHRGGAWVGASRTLPLGQMGLS*SSGRGH
Trigger: GTGCCCCCGTCCAGAGCTGCAGCTGAGCCCCATCTG...TCCAAGGGGGAGGGTCCTGGAAGCGCCCACCCAGGCGCCGCCCCTGTGCTTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGCACAGGGGCGGCGCCTaGGTGGGCGCTTCCAGGACC +
Preference number: 2 (lower is better)
Translates to: CAPGALALPAPSPREGLLHRGGA*VGASRT
Trigger: GGTCCTGGAAGCGCCCACCCAGGCGCCGCCCCTGTG...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp AGCAAGCACAGGGGCGGCGCCTGGGTGGGCGCTTCCAGGACCCTCCCCCTTGGAGTTCTGCTGGACGGTTaGGAGGCTCCAGTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: SKHRGGAWVGASRTLPLGVLLDG*EAPVAG
Trigger: GCCTGCCACTGGAGCCTCTCAACCGTCCAGCAGAAC...TCCAAGGGGGAGGGTCCTGGAAGCGCCCACCCAGGCGCCGCCCCTGTGCTTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTCCAGGGAGCTGGCCTTaGCTGCCTCGCTGTGCGGCC +
Preference number: 2 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPPGSWP*LPRCAA
Trigger: GGCCGCACAGCGAGGCAGTCAAGGCCAGCTCCCTGG...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp AGCAAGCACAGGGGCGGCGCCTGGGTGGGCGCTTCCAGGACCCTCCCCCTTGGACGGAGGGGCCACTTCTaGCCAGTTCAGCCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: SKHRGGAWVGASRTLPLGRRGHF*PVQPLS
Trigger: GGAGAGAGGCTGAACTGGCCAGAAGTGGCCCCTCCG...TCCAAGGGGGAGGGTCCTGGAAGCGCCCACCCAGGCGCCGCCCCTGTGCTTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCGGTGTCAGGTGGGTCTaGTTTCGCACCCGAGGCGAC +
Preference number: 2 (lower is better)
Translates to: EGPHGELEQARNRQHPGRGVRWV*FRTRGD
Trigger: GTCGCCTCGGGTGCGAAATCAGACCCACCTGACACC...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCAGTGGTGGGGCGCCTGTaGTGCCTGTGGAGCCCCACC +
Preference number: 2 (lower is better)
Translates to: WSRHGTANTQAANATSHAVVGRL*CLWSPT
Trigger: GGTGGGGCTCCACAGGCAGCACAGGCGCCCCACCAC...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGGGGGGCACAGCACCCTaGCTGGGATGGGCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: GGHRENKVPAAELASWSVGGTAP*LGWAGV
Trigger: CACCCCTGCCCATCCCAGCCAGGGTGCTGTGCCCCC...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCAGCCGCCAGCTGTGTCTaGCAGCTGTCCCCCAGGGGG +
Preference number: 2 (lower is better)
Translates to: AGLDCLAVRPITLTTFAAAASCV*QLSPRG
Trigger: CCCCCTGGGGGACAGCTGCCAGACACAGCTGGCGGC...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGGCCGCCAGCTGTGTCTaGCAGCTGTCCCCCAGGGGG +
Preference number: 2 (lower is better)
Translates to: GGHRENKVPAAELASWSVAASCV*QLSPRG
Trigger: CCCCCTGGGGGACAGCTGCCAGACACAGCTGGCGGC...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCATGGCCACCTCGGTCTaGGCTCCAGGGTTGGCAGCT +
Preference number: 2 (lower is better)
Translates to: EGPHGELEQARNRQHPGRMATSV*APGLAA
Trigger: AGCTGCCAACCCTGGAGCCCAGACCGAGGTGGCCAT...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCGCACCTGGTCCCACTaGGTCCCCAAACTGGGTGGT +
Preference number: 2 (lower is better)
Translates to: EGPHGELEQARNRQHPGRRTWSH*VPKLGG
Trigger: ACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGCG...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCCTCTAGAGTTGGGGTaGTCATGGCGACCCTCGTGG +
Preference number: 2 (lower is better)
Translates to: EGPHGELEQARNRQHPGRPLELG*SWRPSW
Trigger: CCACGAGGGTCGCCATGATCACCCCAACTCTAGAGG...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTGCAGGACCTGCTGTCTaGAGCTCCGAGGGACTGGGC +
Preference number: 2 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPAGPAV*SSEGLG
Trigger: GCCCAGTCCCTCGGAGCTGCAGACAGCAGGTCCTGC...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp AGCAAGCACAGGGGCGGCGCCTGGGTGGGCGCTTCCAGGACCCTCCCCCTTGGAGAAGCGCTTAGCATCTaGTGCTGCCGCCAGCTGTGT +
Preference number: 2 (lower is better)
Translates to: SKHRGGAWVGASRTLPLGEALSI*CCRQLC
Trigger: ACACAGCTGGCGGCAGCACCAGATGCTAAGCGCTTC...TCCAAGGGGGAGGGTCCTGGAAGCGCCCACCCAGGCGCCGCCCCTGTGCTTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCACCCCAAACTGGGTGGTaGTGGGGCGCCTGTGCTGCC +
Preference number: 2 (lower is better)
Translates to: AGLDCLAVRPITLTTFAAPQTGW*WGACAA
Trigger: GGCAGCACAGGCGCCCCACCACCACCCAGTTTGGGG...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTGGTCCCCAAACTGGGTaGTGGTGGGGCGCCTGTGCT +
Preference number: 2 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPGPQTG*WWGACA
Trigger: AGCACAGGCGCCCCACCACCACCCAGTTTGGGGACC...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGAGGGCAGGACCAGCCTaGACCGTTCCCACAGGGCCT +
Preference number: 2 (lower is better)
Translates to: CAPGALALPAPSPREGLLRAGPA*TVPTGP
Trigger: AGGCCCTGTGGGAACGGTCCAGGCTGGTCCTGCCCT...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCATGCAGACAGGTGCCTaGGAGGAGGCTACGGCCATC +
Preference number: 2 (lower is better)
Translates to: EGPHGELEQARNRQHPGRMQTGA*EEATAI
Trigger: GATGGCCGTAGCCTCCTCCCAGGCACCTGTCTGCAT...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCATGCCCGCGGCAGAGCTaGCGTCTTGGAGCGTGGCCA +
Preference number: 2 (lower is better)
Translates to: WSRHGTANTQAANATSHACPRQS*RLGAWP
Trigger: TGGCCACGCTCCAAGACGCCAGCTCTGCCGCGGGCA...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CAA 90 bp CACGCTCCCCCTCCTGTCCCACAGGCAGGCACGTGGAAGGGCTGGTaGTGCATGAGAGCAGGAACAGCCCAGGCACAAGGCCGGGCTTCA +
Preference number: 2 (lower is better)
Translates to: HAPPPVPQAGTWKGW*CMRAGTAQAQGRAS
Trigger: TGAAGCCCGGCCTTGTGCCTGGGCTGTTCCTGCTCTCATGCACAACCAGCCCTTCCACGTGCCTGCCTGTGGGACAGGAGGGGGAGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTGGCTCCTGAACTGCTaGGTTCCCCTCCCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: CAPGALALPAPSPREGLLWLLNC*VPLPGL
Trigger: GAGGCCAGGGAGGGGAACTCAGCAGTTCAGGAGCCA...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp AGCAAGCACAGGGGCGGCGCCTGGGTGGGCGCTTCCAGGACCCTCCCCCTTGGACACACACCAAGTCTGTaGACGCCGGCAGTGGTTCTT +
Preference number: 2 (lower is better)
Translates to: SKHRGGAWVGASRTLPLGHTPSL*TPAVVL
Trigger: AAGAACCACTGCCGGCGTGCACAGACTTGGTGTGTG...TCCAAGGGGGAGGGTCCTGGAAGCGCCCACCCAGGCGCCGCCCCTGTGCTTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCGAAGCGCTTAGCATCTaGTGCTGCCGCCAGCTGTGT +
Preference number: 2 (lower is better)
Translates to: EGPHGELEQARNRQHPGREALSI*CCRQLC
Trigger: ACACAGCTGGCGGCAGCACCAGATGCTAAGCGCTTC...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCAAGCCCTGCCCTGCCCTaGGGTAGAAAGGGGTGTCCC +
Preference number: 2 (lower is better)
Translates to: AGLDCLAVRPITLTTFAASPALP*GRKGCP
Trigger: GGGACACCCCTTTCTACCCCAGGGCAGGGCAGGGCT...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAGGCAAGAGGGCTGTaGGCAGCTGACCTGACTCAA +
Preference number: 2 (lower is better)
Translates to: EGPHGELEQARNRQHPGRQARGL*AADLTQ
Trigger: TTGAGTCAGGTCAGCTGCCCACAGCCCTCTTGCCTG...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp CCTCGTGGAGTACAGGTCAGTTACGTGGACTCGGCAATCCCTGAGCTCGGGGAGGGCCGGGCTTCAGTCTaGCTGGACCAGCAGCGGAGG +
Preference number: 2 (lower is better)
Translates to: PRGVQVSYVDSAIPELGEGRASV*LDQQRR
Trigger: CCTCCGCTGCTGGTCCAGTCAGACTGAAGCCCGGCC...CTCCCCGAGCTCAGGGATTGCCGAGTCCACGTAACTGACCTGTACTCCACGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCACTCACCCCCTTCAGGTaGGGTGGGTCTAGTCGGGCT +
Preference number: 2 (lower is better)
Translates to: WSRHGTANTQAANATSHALTPFR*GGSSRA
Trigger: AGCCCGACTAGACCCACCTCACCTGAAGGGGGTGAG...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTCGGACGCTGAGCTCCTaGCCCCCGAGCCTTGCCCCA +
Preference number: 2 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQARTLSS*PPSLAP
Trigger: TGGGGCAAGGCTCGGGGGTCAGGAGCTCAGCGTCCG...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCAGCAGGCGGCCTCCTaGCTACAGGGCATGAGGAGG +
Preference number: 2 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVQQAAS*LQGMRR
Trigger: CCTCCTCATGCCCTGTAGTCAGGAGGCCGCCTGCTG...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGGCGCTTAGCATCTGGTaGTGCCGCCAGCTGTGTCTG +
Preference number: 2 (lower is better)
Translates to: CAPGALALPAPSPREGLLALSIW*CRQLCL
Trigger: CAGACACAGCTGGCGGCAGCACCAGATGCTAAGCGC...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCACCCAGCCCTGCCCTaGCCTGGGGTAGAAAGGGGT +
Preference number: 2 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRHPALP*PGVERG
Trigger: ACCCCTTTCTACCCCAGGGCAGGGCAGGGCTGGGTG...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTGGAGCTGGCCTTGACTaGCTCGCTGTGCGGCCCATC +
Preference number: 2 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVGAGLD*LAVRPI
Trigger: GATGGGCCGCACAGCGAGGCAGTCAAGGCCAGCTCC...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGCAGCCACGCCTCCTGTaGACCTGGGGCCTTGGCACT +
Preference number: 2 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGAQPRLL*TWGLGT
Trigger: AGTGCCAAGGCCCCAGGTGCACAGGAGGCGTGGCTG...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCAGCCACGCCTCCTGTaGACCTGGGGCCTTGGCACT +
Preference number: 2 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVQPRLL*TWGLGT
Trigger: AGTGCCAAGGCCCCAGGTGCACAGGAGGCGTGGCTG...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTCTGACCCCCGAGCCTTaGCCCAGGGCCCCCTCCTTC +
Preference number: 2 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQALTPEP*PRAPSF
Trigger: GAAGGAGGGGGCCCTGGGGCAAGGCTCGGGGGTCAG...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTGGGGGCACAGCACCCTaGCTGGGATGGGCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: GDHGDPRGMAERVTLANIGGTAP*LGWAGV
Trigger: CACCCCTGCCCATCCCAGCCAGGGTGCTGTGCCCCC...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGCTGCTCGTCCAGACATaGCCCCGTGTGTTCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GGHRENKVPAAELASWSVLLVQT*PRVFRA
Trigger: GGCCCTGAACACACGGGGCCATGTCTGGACGAGCAG...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGAGCCCTGCCCTGCCCTaGGGTAGAAAGGGGTGTCCC +
Preference number: 2 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRSPALP*GRKGCP
Trigger: GGGACACCCCTTTCTACCCCAGGGCAGGGCAGGGCT...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGCAAACTGGGTGGTGGTaGGGCGCCTGTGCTGCCTGT +
Preference number: 2 (lower is better)
Translates to: GGHRENKVPAAELASWSVQTGWW*GACAAC
Trigger: ACAGGCAGCACAGGCGCCCCACCACCACCCAGTTTG...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCACAAACTGGGTGGTGGTaGGGCGCCTGTGCTGCCTGT +
Preference number: 2 (lower is better)
Translates to: AGLDCLAVRPITLTTFAAQTGWW*GACAAC
Trigger: ACAGGCAGCACAGGCGCCCCACCACCACCCAGTTTG...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGGGTCCCCAAACTGGGTaGTGGTGGGGCGCCTGTGCT +
Preference number: 2 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGAGPQTG*WWGACA
Trigger: AGCACAGGCGCCCCACCACCACCCAGTTTGGGGACC...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTACTGGGTCCCCAAACTaGGTGGTGGTGGGGCGCCTG +
Preference number: 2 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVTGSPN*VVVGRL
Trigger: CAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGT...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCACGCACCTGGTCCCACTaGGTCCCCAAACTGGGTGGT +
Preference number: 2 (lower is better)
Translates to: WSRHGTANTQAANATSHARTWSH*VPKLGG
Trigger: ACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGCG...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCATCATGGCGACCCTCGTaGGATGGCCGAGAGGGTGAC +
Preference number: 2 (lower is better)
Translates to: AGLDCLAVRPITLTTFAASWRPS*DGREGD
Trigger: GTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGA...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCGATAGGTTCAGGAGGTaGGACCGGGTGGGATTCAGA +
Preference number: 2 (lower is better)
Translates to: EGPHGELEQARNRQHPGRDRFRR*DRVGFR
Trigger: TCTGAATCCCACCCGGTCCCACCTCCTGAACCTATC...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCAAGGGCTGGTTGTGCATaGGAGCAGGAACAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: WSRHGTANTQAANATSHARAGCA*EQEQPR
Trigger: CCTGGGCTGTTCCTGCTCTCATGCACAACCAGCCCT...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTGTTCTGCTGGACGGTTaGGAGGCTCCAGTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVVLLDG*EAPVAG
Trigger: GCCTGCCACTGGAGCCTCTCAACCGTCCAGCAGAAC...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCACTTGGAGGTAGGAACTaGGGGGCAAGCTCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: WSRHGTANTQAANATSHALGGRN*GASSVG
Trigger: CCCCACAGAGCTTGCCCCTCAGTTCCTACCTCCAAG...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCATGCGGCCCATCACCCTaGCCACCTTTGCTGCAATCC +
Preference number: 2 (lower is better)
Translates to: WSRHGTANTQAANATSHACGPSP*PPLLQS
Trigger: GGATTGCAGCAAAGGTGGTCAGGGTGATGGGCCGCA...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp GGATTCTCACTGGAGTGGCTCAATGAGGATCTTGCAGGAGGCCGGCAGGGTGATCGGACGCTGAGCTCCTaGCCCCCGAGCCTTGCCCCA +
Preference number: 2 (lower is better)
Translates to: GFSLEWLNEDLAGGRQGDRTLSS*PPSLAP
Trigger: TGGGGCAAGGCTCGGGGGTCAGGAGCTCAGCGTCCG...ATCACCCTGCCGGCCTCCTGCAAGATCCTCATTGAGCCACTCCAGTGAGAATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCGGGTTTTGGCTGGGCTaGGTAGCGGACGCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFGFWLG*VADAEL
Trigger: GAGCTCAGCGTCCGCTACTCAGCCCAGCCAAAACCC...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCAGGGCCCAGCTTCTaGTCCACATCTCTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: CAPGALALPAPSPREGLLSGPSF*STSLGR
Trigger: TCTGCCCAGAGATGTGGAGCAGAAGCTGGGCCCTGA...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCTCAGCCTCTCTCCCCTaGTCGTCCAGACATGGCCCC +
Preference number: 2 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFSASLP*SSRHGP
Trigger: GGGGCCATGTCTGGACGAGCAGGGGAGAGAGGCTGA...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCACTCCTTCACTCCCCGTaGCCCTCCCTCTGTCCTCAT +
Preference number: 2 (lower is better)
Translates to: WSRHGTANTQAANATSHALLHSP*PSLCPH
Trigger: ATGAGGACAGAGGGAGGGGCACGGGGAGTGAAGGAG...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGGCAGCTGGAAGTGGGTaGAGGTGCTGCTGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQAAGSG*RCCWAS
Trigger: GGAGGCCCAGCAGCACCTGCACCCACTTCCAGCTGC...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCACCCGAAAGCAGGTGGTaGCTGGGTCAGGAGAAGGTG +
Preference number: 2 (lower is better)
Translates to: WSRHGTANTQAANATSHAPESRW*LGQEKV
Trigger: CACCTTCTCCTGACCCAGGCACCACCTGCTTTCGGG...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTTCCCTTCATGACCTCTaGAGGGCCACCATCCTTCCC +
Preference number: 2 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPSLHDL*RATILP
Trigger: GGGAAGGATGGTGGCCCTCCAGAGGTCATGAAGGGA...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGATGGCCACCTCGGTCTaGGCTCCAGGGTTGGCAGCT +
Preference number: 2 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRMATSV*APGLAA
Trigger: AGCTGCCAACCCTGGAGCCCAGACCGAGGTGGCCAT...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTCATGGCGACCCTCGTaGGATGGCCGAGAGGGTGAC +
Preference number: 2 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGASWRPS*DGREGD
Trigger: GTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGA...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGCCCCGAAAGCAGGTaGTGCCTGGGTCAGGAGAAG +
Preference number: 2 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVRPESR*CLGQEK
Trigger: CTTCTCCTGACCCAGGCACCACCTGCTTTCGGGGCG...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGGGAACAGCAGTCGGCTaGGGCAGGAGAGAGGGCAGT +
Preference number: 2 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGAGTAVG*GRREGS
Trigger: ACTGCCCTCTCTCCTGCCCCAGCCGACTGCTGTTCC...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTGTGGCCAGGGAAGTCTaGGAACAGCAGTCGGCTGGG +
Preference number: 2 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVVAREV*EQQSAG
Trigger: CCCAGCCGACTGCTGTTCCCAGACTTCCCTGGCCAC...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp GAAAGGGGTGTCCCTGTCCCAGAATGGTTTGGGGTGGCTCCTGAACTGCTGAGTGGCCGGGCTTCAGTCTaGCTGGACCAGCAGCGGAGG +
Preference number: 2 (lower is better)
Translates to: ERGVPVPEWFGVAPELLSGRASV*LDQQRR
Trigger: CCTCCGCTGCTGGTCCAGTCAGACTGAAGCCCGGCC...ACTCAGCAGTTCAGGAGCCACCCCAAACCATTCTGGGACAGGGACACCCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGCGGCCCATCACCCTaGCCACCTTTGCTGCAATCC +
Preference number: 2 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGACGPSP*PPLLQS
Trigger: GGATTGCAGCAAAGGTGGTCAGGGTGATGGGCCGCA...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCATGCCGTGTGCTCTGCTaGCACCCTTCAGTGGTCACA +
Preference number: 2 (lower is better)
Translates to: WSRHGTANTQAANATSHACRVLC*HPSVVT
Trigger: TGTGACCACTGAAGGGTGTCAGCAGAGCACACGGCA...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCAACTCCTGAACTCAGGTaGTGTGCCTGCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: WSRHGTANTQAANATSHATPELR*CACLGL
Trigger: GAGGCCAAGGCAGGCACATCACCTGAGTTCAGGAGT...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCAAGGGCTGTGGGCAGCTaGCCTGACTCAACAAGATCC +
Preference number: 2 (lower is better)
Translates to: WSRHGTANTQAANATSHARAVGS*PDSTRS
Trigger: GGATCTTGTTGAGTCAGGTCAGCTGCCCACAGCCCT...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTCAGATGGGGCTCAGCTaGAGCTCTGGACGGGGGCAC +
Preference number: 2 (lower is better)
Translates to: GDHGDPRGMAERVTLANIQMGLS*SSGRGH
Trigger: GTGCCCCCGTCCAGAGCTGCAGCTGAGCCCCATCTG...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTTGTTGCTGCAGGACCTaGTGTCTGCAGCTCCGAGGG +
Preference number: 2 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVCCCRT*CLQLRG
Trigger: CCCTCGGAGCTGCAGACAGCAGGTCCTGCAGCAACA...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCCCACCCTTGTCTGGCTaGCAACAAGGGTCTCACCCC +
Preference number: 2 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFPPLSG*QQGSHP
Trigger: GGGGTGAGACCCTTGTTGGCAGCCAGACAAGGGTGG...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGCCCGAAAGCAGGTGGTaGCTGGGTCAGGAGAAGGTG +
Preference number: 2 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGAPESRW*LGQEKV
Trigger: CACCTTCTCCTGACCCAGGCACCACCTGCTTTCGGG...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCAGCACTCAGCACTCCCTaGCACTCCACCACCCACTTA +
Preference number: 2 (lower is better)
Translates to: WSRHGTANTQAANATSHAALSTP*HSTTHL
Trigger: TAAGTGGGTGGTGGAGTGGCAGGGAGTGCTGAGTGC...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTGCTCAGCTGCAGCTCTaGACGGGGGCACAGCACCCT +
Preference number: 2 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQAAQLQL*TGAQHP
Trigger: AGGGTGCTGTGCCCCCGTCCAGAGCTGCAGCTGAGC...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp CCTCGTGGAGTACAGGTCAGTTACGTGGACTCGGCAATCCCTGAGCTCGGGGAGCGGAGGGGCCACTTCTaGCCAGTTCAGCCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: PRGVQVSYVDSAIPELGERRGHF*PVQPLS
Trigger: GGAGAGAGGCTGAACTGGCCAGAAGTGGCCCCTCCG...CTCCCCGAGCTCAGGGATTGCCGAGTCCACGTAACTGACCTGTACTCCACGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTGGGCTTCAGTCTGACTaGACCAGCAGCGGAGGGGCC +
Preference number: 2 (lower is better)
Translates to: GDHGDPRGMAERVTLANIGLQSD*TSSGGA
Trigger: GGCCCCTCCGCTGCTGGTCCAGTCAGACTGAAGCCC...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp AATGTCCTGAGCTCTGCTGCGGCCTCTAGAGTTGGGGTGATCATGGCGACCCTCGGGCTTCAGTCTGACTaGACCAGCAGCGGAGGGGCC +
Preference number: 2 (lower is better)
Translates to: NVLSSAAASRVGVIMATLGLQSD*TSSGGA
Trigger: GGCCCCTCCGCTGCTGGTCCAGTCAGACTGAAGCCC...GAGGGTCGCCATGATCACCCCAACTCTAGAGGCCGCAGCAGAGCTCAGGACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGCCACAGGCAGGCACGTaGAAGGGCTGGTTGTGCATG +
Preference number: 2 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGAPQAGT*KGWLCM
Trigger: CATGCACAACCAGCCCTTCCACGTGCCTGCCTGTGG...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCTGAGTTCCCCTCCCTaGCCTCCTACAGGGGATCCA +
Preference number: 2 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVLSSPP*PPTGDP
Trigger: TGGATCCCCTGTAGGAGGCCAGGGAGGGGAACTCAG...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCAAGCCCCACCCTTGTCTaGCTGCCAACAAGGGTCTCA +
Preference number: 2 (lower is better)
Translates to: WSRHGTANTQAANATSHASPTLV*LPTRVS
Trigger: TGAGACCCTTGTTGGCAGCCAGACAAGGGTGGGGCT...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTCGCCTGTGCTGCCTGTaGAGCCCCACCCTTGTCTGG +
Preference number: 2 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQARLCCL*SPTLVW
Trigger: CCAGACAAGGGTGGGGCTCCACAGGCAGCACAGGCG...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTGTTCTTGCTGTCACTTaGGCCTGGGCTGCCCTCCCT +
Preference number: 2 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVVLAVT*AWAALP
Trigger: AGGGAGGGCAGCCCAGGCCCAAGTGACAGCAAGAAC...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGAACCCCGTGTTCTGCTaGACGGTTGAGAGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: GGHRENKVPAAELASWSVNPVFC*TVERLQ
Trigger: CTGGAGCCTCTCAACCGTCCAGCAGAACACGGGGTT...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCAGAGGGGCAAGCTCTGTaGGGGAATGTCCTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: AGLDCLAVRPITLTTFAAEGQAL*GNVLSS
Trigger: AGAGCTCAGGACATTCCCCCACAGAGCTTGCCCCTC...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGGTGCTCAGCATGCACTaGCCAGAGGGATGCAGACAG +
Preference number: 2 (lower is better)
Translates to: GGHRENKVPAAELASWSVVLSMH*PEGCRQ
Trigger: CTGTCTGCATCCCTCTGGCCAGTGCATGCTGAGCAC...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGCAGGCAAGAGGGCTGTaGGCAGCTGACCTGACTCAA +
Preference number: 2 (lower is better)
Translates to: GGHRENKVPAAELASWSVQARGL*AADLTQ
Trigger: TTGAGTCAGGTCAGCTGCCCACAGCCCTCTTGCCTG...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp GGATTCTCACTGGAGTGGCTCAATGAGGATCTTGCAGGAGGCCGGCAGGGTGATCAGCAGGCGGCCTCCTaGCTACAGGGCATGAGGAGG +
Preference number: 2 (lower is better)
Translates to: GFSLEWLNEDLAGGRQGDQQAAS*LQGMRR
Trigger: CCTCCTCATGCCCTGTAGTCAGGAGGCCGCCTGCTG...ATCACCCTGCCGGCCTCCTGCAAGATCCTCATTGAGCCACTCCAGTGAGAATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTAGGGCTGTGGGCAGCTaGCCTGACTCAACAAGATCC +
Preference number: 2 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVRAVGS*PDSTRS
Trigger: GGATCTTGTTGAGTCAGGTCAGCTGCCCACAGCCCT...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCACCGTGCAGGTATTGTTaGTGCAGGACCTGCTGTCTG +
Preference number: 2 (lower is better)
Translates to: WSRHGTANTQAANATSHAPCRYC*CRTCCL
Trigger: CAGACAGCAGGTCCTGCAGCAACAATACCTGCACGG...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCCTTAGCATCTGGTGCTaGCGCCAGCTGTGTCTGGCA +
Preference number: 2 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFLSIWC*RQLCLA
Trigger: TGCCAGACACAGCTGGCGGCAGCACCAGATGCTAAG...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCATGGAAGGGCTGGTTGTaGATGAGAGCAGGAACAGCC +
Preference number: 2 (lower is better)
Translates to: WSRHGTANTQAANATSHAWKGWL*MRAGTA
Trigger: GGCTGTTCCTGCTCTCATGCACAACCAGCCCTTCCA...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp AATGTCCTGAGCTCTGCTGCGGCCTCTAGAGTTGGGGTGATCATGGCGACCCTCCCACCATCCTTCCCTTaGCCAACCCCGGGGGCTACA +
Preference number: 2 (lower is better)
Translates to: NVLSSAAASRVGVIMATLPPSFP*PTPGAT
Trigger: TGTAGCCCCCGGGGTTGGGCAAGGGAAGGATGGTGG...GAGGGTCGCCATGATCACCCCAACTCTAGAGGCCGCAGCAGAGCTCAGGACATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCACACACACCAAGTCTGTaGACGCCGGCAGTGGTTCTT +
Preference number: 2 (lower is better)
Translates to: WSRHGTANTQAANATSHAHTPSL*TPAVVL
Trigger: AAGAACCACTGCCGGCGTGCACAGACTTGGTGTGTG...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGCTGAACCCCGTGTTCTaGTGGACGGTTGAGAGGCTC +
Preference number: 2 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGALNPVF*WTVERL
Trigger: GAGCCTCTCAACCGTCCAGCAGAACACGGGGTTCAG...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp GGATTCTCACTGGAGTGGCTCAATGAGGATCTTGCAGGAGGCCGGCAGGGTGATGCAGCTGGAAGTGGGTaGAGGTGCTGCTGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: GFSLEWLNEDLAGGRQGDAAGSG*RCCWAS
Trigger: GGAGGCCCAGCAGCACCTGCACCCACTTCCAGCTGC...ATCACCCTGCCGGCCTCCTGCAAGATCCTCATTGAGCCACTCCAGTGAGAATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGGTCACGTGCTCAGCATaGACTGGCCAGAGGGATGCA +
Preference number: 2 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGAVTCSA*TGQRDA
Trigger: TGCATCCCTCTGGCCAGTGCATGCTGAGCACGTGAC...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGGCACTCAGCACTCCCTaGCACTCCACCACCCACTTA +
Preference number: 2 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRALSTP*HSTTHL
Trigger: TAAGTGGGTGGTGGAGTGGCAGGGAGTGCTGAGTGC...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GACGTACCAGCACTGCGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCGCTCAGCTGCAGCTCTaGACGGGGGCACAGCACCCT +
Preference number: 2 (lower is better)
Translates to: DVPALRVDQPRFTCAKPCAQLQL*TGAQHP
Trigger: AGGGTGCTGTGCCCCCGTCCAGAGCTGCAGCTGAGC...GCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACGCAGTGCTGGTACGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp AATGTCCTGAGCTCTGCTGCGGCCTCTAGAGTTGGGGTGATCATGGCGACCCTCGCAGCTCCGAGGGACTaGGCTTCAGATGGGGCTCAG +
Preference number: 2 (lower is better)
Translates to: NVLSSAAASRVGVIMATLAAPRD*ASDGAQ
Trigger: CTGAGCCCCATCTGAAGCCCAGTCCCTCGGAGCTGC...GAGGGTCGCCATGATCACCCCAACTCTAGAGGCCGCAGCAGAGCTCAGGACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp AATGTCCTGAGCTCTGCTGCGGCCTCTAGAGTTGGGGTGATCATGGCGACCCTCCTGCTCGTCCAGACATaGCCCCGTGTGTTCAGGGCC +
Preference number: 2 (lower is better)
Translates to: NVLSSAAASRVGVIMATLLLVQT*PRVFRA
Trigger: GGCCCTGAACACACGGGGCCATGTCTGGACGAGCAG...GAGGGTCGCCATGATCACCCCAACTCTAGAGGCCGCAGCAGAGCTCAGGACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCGGCACGTGGAAGGGCTaGTTGTGCATGAGAGCAGGA +
Preference number: 2 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFGTWKG*LCMRAG
Trigger: TCCTGCTCTCATGCACAACCAGCCCTTCCACGTGCC...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCTCCCTTCATGACCTCTaGAGGGCCACCATCCTTCCC +
Preference number: 2 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFSLHDL*RATILP
Trigger: GGGAAGGATGGTGGCCCTCCAGAGGTCATGAAGGGA...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGTCCAGGGTTGGCAGCTaGAGCCACAGAGGTCCCTTC +
Preference number: 2 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQSRVGS*SHRGPF
Trigger: GAAGGGACCTCTGTGGCTCCAGCTGCCAACCCTGGA...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp CCTCGTGGAGTACAGGTCAGTTACGTGGACTCGGCAATCCCTGAGCTCGGGGAGGTTCTTGCTGTCACTTaGGCCTGGGCTGCCCTCCCT +
Preference number: 2 (lower is better)
Translates to: PRGVQVSYVDSAIPELGEVLAVT*AWAALP
Trigger: AGGGAGGGCAGCCCAGGCCCAAGTGACAGCAAGAAC...CTCCCCGAGCTCAGGGATTGCCGAGTCCACGTAACTGACCTGTACTCCACGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGAACCCCGTGTTCTGCTaGACGGTTGAGAGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRNPVFC*TVERLQ
Trigger: CTGGAGCCTCTCAACCGTCCAGCAGAACACGGGGTT...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTAGGAGAGGAGACGTCTaGGAGGGTTTTGGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVRRGDV*EGFGWA
Trigger: AGCCCAGCCAAAACCCTCCCAGACGTCTCCTCTCCT...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGATTCTCACTGGAGTGGCTCAATGAGGATCTTGCAGGAGGCCGGCAGGGTGATGGCCTCACGGAGAGTTaGAGCAGGCACGGAACCGCC +
Preference number: 2 (lower is better)
Translates to: GFSLEWLNEDLAGGRQGDGLTES*SRHGTA
Trigger: GGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCC...ATCACCCTGCCGGCCTCCTGCAAGATCCTCATTGAGCCACTCCAGTGAGAATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CAA 90 bp ACCAAGTCTGTGCACGCCGGCAGTGGTTCTTGTTCTTGCTGTCACTaGGGCCTGGGCTGCCCTCCCTGGCTCTTGGTAAGTCACCCTCTG +
Preference number: 2 (lower is better)
Translates to: TKSVHAGSGSCSCCH*GLGCPPWLLVSHPL
Trigger: CAGAGGGTGACTTACCAAGAGCCAGGGAGGGCAGCCCAGGCCCAAGTGACAGCAAGAACAAGAACCACTGCCGGCGTGCACAGACTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp AATGTCCTGAGCTCTGCTGCGGCCTCTAGAGTTGGGGTGATCATGGCGACCCTCAGGGCTGGTTGTGCATaGGAGCAGGAACAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: NVLSSAAASRVGVIMATLRAGCA*EQEQPR
Trigger: CCTGGGCTGTTCCTGCTCTCATGCACAACCAGCCCT...GAGGGTCGCCATGATCACCCCAACTCTAGAGGCCGCAGCAGAGCTCAGGACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGACAGAGGTCCCTTCATaGCCTCTGGAGGGCCACCAT +
Preference number: 2 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQTEVPS*PLEGHH
Trigger: ATGGTGGCCCTCCAGAGGTCATGAAGGGACCTCTGT...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTTGTGGGGGAATGTCCTaGGCTCTGCTGCGGCCTCTA +
Preference number: 2 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQACGGMS*ALLRPL
Trigger: TAGAGGCCGCAGCAGAGCTCAGGACATTCCCCCACA...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCTCTCCTTCCTTGTCTaGCTTCCTGTGGCACTCAGC +
Preference number: 2 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVLSFLV*LPVALS
Trigger: GCTGAGTGCCACAGGAAGTCAGACAAGGAAGGAGAG...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGTGCAGGTATTGTTGCTaGAGGACCTGCTGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: GGHRENKVPAAELASWSVCRYCC*RTCCLQ
Trigger: CTGCAGACAGCAGGTCCTGCAGCAACAATACCTGCA...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGTCAGGGCCCAGCTTCTaGTCCACATCTCTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQSGPSF*STSLGR
Trigger: TCTGCCCAGAGATGTGGAGCAGAAGCTGGGCCCTGA...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp GGATTCTCACTGGAGTGGCTCAATGAGGATCTTGCAGGAGGCCGGCAGGGTGATCCACCATCCTTCCCTTaGCCAACCCCGGGGGCTACA +
Preference number: 2 (lower is better)
Translates to: GFSLEWLNEDLAGGRQGDPPSFP*PTPGAT
Trigger: TGTAGCCCCCGGGGTTGGGCAAGGGAAGGATGGTGG...ATCACCCTGCCGGCCTCCTGCAAGATCCTCATTGAGCCACTCCAGTGAGAATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTCCACCCTTGTCTGGCTaGCAACAAGGGTCTCACCCC +
Preference number: 2 (lower is better)
Translates to: GDHGDPRGMAERVTLANIPPLSG*QQGSHP
Trigger: GGGGTGAGACCCTTGTTGGCAGCCAGACAAGGGTGG...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGAGTGGTTCTTGTTCTTaGTGTCACTTGGGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: GGHRENKVPAAELASWSVSGSCS*CHLGLG
Trigger: GCCCAGGCCCAAGTGACAGCAAGAACAAGAACCACT...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGCTGAACCCCGTGTTCTaGTGGACGGTTGAGAGGCTC +
Preference number: 2 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQLNPVF*WTVERL
Trigger: GAGCCTCTCAACCGTCCAGCAGAACACGGGGTTCAG...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGGCAATCTCAGCTCACTaGAACCTCCGCCTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQAISAH*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGTGAGCTGAGATTGC...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTCCACAGGCAGGCACGTaGAAGGGCTGGTTGTGCATG +
Preference number: 2 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQAPQAGT*KGWLCM
Trigger: CATGCACAACCAGCCCTTCCACGTGCCTGCCTGTGG...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTGTCCCTGTCCCAGAATaGTTTGGGGTGGCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVVPVPE*FGVAPE
Trigger: TTCAGGAGCCACCCCAAACCATTCTGGGACAGGGAC...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGGTTGAGAGGCTCCAGTaGCAGGCACATGTGAGTCCC +
Preference number: 2 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQVERLQ*QAHVSP
Trigger: GGGACTCACATGTGCCTGCCACTGGAGCCTCTCAAC...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGGAGGGGCAAGCTCTGTaGGGGAATGTCCTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQEGQAL*GNVLSS
Trigger: AGAGCTCAGGACATTCCCCCACAGAGCTTGCCCCTC...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGGTGATGTGCCTGCCTTaGCCTCCCAATGTGCTAGGA +
Preference number: 2 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGAVMCLP*PPNVLG
Trigger: TCCTAGCACATTGGGAGGCCAAGGCAGGCACATCAC...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGATTCTCACTGGAGTGGCTCAATGAGGATCTTGCAGGAGGCCGGCAGGGTGATGTGGCCAGGGAAGTCTaGGAACAGCAGTCGGCTGGG +
Preference number: 2 (lower is better)
Translates to: GFSLEWLNEDLAGGRQGDVAREV*EQQSAG
Trigger: CCCAGCCGACTGCTGTTCCCAGACTTCCCTGGCCAC...ATCACCCTGCCGGCCTCCTGCAAGATCCTCATTGAGCCACTCCAGTGAGAATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp GGATTCTCACTGGAGTGGCTCAATGAGGATCTTGCAGGAGGCCGGCAGGGTGATTGTGGGGGAATGTCCTaGGCTCTGCTGCGGCCTCTA +
Preference number: 2 (lower is better)
Translates to: GFSLEWLNEDLAGGRQGDCGGMS*ALLRPL
Trigger: TAGAGGCCGCAGCAGAGCTCAGGACATTCCCCCACA...ATCACCCTGCCGGCCTCCTGCAAGATCCTCATTGAGCCACTCCAGTGAGAATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp GGATTCTCACTGGAGTGGCTCAATGAGGATCTTGCAGGAGGCCGGCAGGGTGATTCCTCAGACCTCACCTaGCCCAGTGCTTCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: GFSLEWLNEDLAGGRQGDSSDLT*PSASPR
Trigger: CCTGGGAGAAGCACTGGGTCAGGTGAGGTCTGAGGA...ATCACCCTGCCGGCCTCCTGCAAGATCCTCATTGAGCCACTCCAGTGAGAATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCCATACCTAGGGCTGTaGAGATCAGAGTTCTGGGCT +
Preference number: 2 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVPYLGL*RSEFWA
Trigger: AGCCCAGAACTCTGATCTTCACAGCCCTAGGTATGG...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGCCATACCTAGGGCTGTaGAGATCAGAGTTCTGGGCT +
Preference number: 2 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGAPYLGL*RSEFWA
Trigger: AGCCCAGAACTCTGATCTTCACAGCCCTAGGTATGG...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGACGTGTGCAAAGCCGTaGAGGTATTGTTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRTCAKP*RYCCCR
Trigger: CCTGCAGCAACAATACCTGCACGGCTTTGCACACGT...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp AATGTCCTGAGCTCTGCTGCGGCCTCTAGAGTTGGGGTGATCATGGCGACCCTCCTTAGCATCTGGTGCTaGCGCCAGCTGTGTCTGGCA +
Preference number: 2 (lower is better)
Translates to: NVLSSAAASRVGVIMATLLSIWC*RQLCLA
Trigger: TGCCAGACACAGCTGGCGGCAGCACCAGATGCTAAG...GAGGGTCGCCATGATCACCCCAACTCTAGAGGCCGCAGCAGAGCTCAGGACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTCCTGACCACCTTTGCTaGAATCCTAGTACATCTCTC +
Preference number: 2 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPPDHLC*NPSTSL
Trigger: GAGAGATGTACTAGGATTGCAGCAAAGGTGGTCAGG...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGGTGATGTGCCTGCCTTaGCCTCCCAATGTGCTAGGA +
Preference number: 2 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQVMCLP*PPNVLG
Trigger: TCCTAGCACATTGGGAGGCCAAGGCAGGCACATCAC...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp CCTCGTGGAGTACAGGTCAGTTACGTGGACTCGGCAATCCCTGAGCTCGGGGAGACGTGTGCAAAGCCGTaGAGGTATTGTTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: PRGVQVSYVDSAIPELGETCAKP*RYCCCR
Trigger: CCTGCAGCAACAATACCTGCACGGCTTTGCACACGT...CTCCCCGAGCTCAGGGATTGCCGAGTCCACGTAACTGACCTGTACTCCACGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTTGGAAGGGCTGGTTGTaGATGAGAGCAGGAACAGCC +
Preference number: 2 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQAWKGWL*MRAGTA
Trigger: GGCTGTTCCTGCTCTCATGCACAACCAGCCCTTCCA...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp GGATTCTCACTGGAGTGGCTCAATGAGGATCTTGCAGGAGGCCGGCAGGGTGATCAACGCAACTTCCCATaGATGGGCCCTGCAGGCATG +
Preference number: 2 (lower is better)
Translates to: GFSLEWLNEDLAGGRQGDQRNFP*MGPAGM
Trigger: CATGCCTGCAGGGCCCATGCATGGGAAGTTGCGTTG...ATCACCCTGCCGGCCTCCTGCAAGATCCTCATTGAGCCACTCCAGTGAGAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GAAAGGGGTGTCCCTGTCCCAGAATGGTTTGGGGTGGCTCCTGAACTGCTGAGTGGCACGTGGAAGGGCTaGTTGTGCATGAGAGCAGGA +
Preference number: 2 (lower is better)
Translates to: ERGVPVPEWFGVAPELLSGTWKG*LCMRAG
Trigger: TCCTGCTCTCATGCACAACCAGCCCTTCCACGTGCC...ACTCAGCAGTTCAGGAGCCACCCCAAACCATTCTGGGACAGGGACACCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTTCCCACAGGGCCTCGTaGAGTACAGGTCAGTTACGT +
Preference number: 2 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQASHRAS*STGQLR
Trigger: ACGTAACTGACCTGTACTCCACGAGGCCCTGTGGGA...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp AATGTCCTGAGCTCTGCTGCGGCCTCTAGAGTTGGGGTGATCATGGCGACCCTCTGCAGGTATTGTTGCTaGAGGACCTGCTGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: NVLSSAAASRVGVIMATLCRYCC*RTCCLQ
Trigger: CTGCAGACAGCAGGTCCTGCAGCAACAATACCTGCA...GAGGGTCGCCATGATCACCCCAACTCTAGAGGCCGCAGCAGAGCTCAGGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCACCCTGACCACCTTTaGTGCAATCCTAGTACATCT +
Preference number: 2 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVHPDHL*CNPSTS
Trigger: AGATGTACTAGGATTGCAGCAAAGGTGGTCAGGGTG...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTGCAGGACCTGCTGTCTaGAGCTCCGAGGGACTGGGC +
Preference number: 2 (lower is better)
Translates to: FIQESGERSSPPSSTTTAAGPAV*SSEGLG
Trigger: GCCCAGTCCCTCGGAGCTGCAGACAGCAGGTCCTGC...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTCACCCAGCCCTGCCCTaGCCTGGGGTAGAAAGGGGT +
Preference number: 2 (lower is better)
Translates to: FIQESGERSSPPSSTTTAHPALP*PGVERG
Trigger: ACCCCTTTCTACCCCAGGGCAGGGCAGGGCTGGGTG...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp GGATTCTCACTGGAGTGGCTCAATGAGGATCTTGCAGGAGGCCGGCAGGGTGATAGTGGTTCTTGTTCTTaGTGTCACTTGGGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: GFSLEWLNEDLAGGRQGDSGSCS*CHLGLG
Trigger: GCCCAGGCCCAAGTGACAGCAAGAACAAGAACCACT...ATCACCCTGCCGGCCTCCTGCAAGATCCTCATTGAGCCACTCCAGTGAGAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp GGATTCTCACTGGAGTGGCTCAATGAGGATCTTGCAGGAGGCCGGCAGGGTGATTCAGGAGAAGGTGTCTaGATAGGTTCAGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: GFSLEWLNEDLAGGRQGDSGEGV*IGSGGG
Trigger: CCCACCTCCTGAACCTATCCAGACACCTTCTCCTGA...ATCACCCTGCCGGCCTCCTGCAAGATCCTCATTGAGCCACTCCAGTGAGAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTGGCCTCACGGAGAGTTaGAGCAGGCACGGAACCGCC +
Preference number: 2 (lower is better)
Translates to: FIQESGERSSPPSSTTTAGLTES*SRHGTA
Trigger: GGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCC...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTTGGCTCCTGAACTGCTaGGTTCCCCTCCCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: FIQESGERSSPPSSTTTAWLLNC*VPLPGL
Trigger: GAGGCCAGGGAGGGGAACTCAGCAGTTCAGGAGCCA...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTCGCCCCGAAAGCAGGTaGTGCCTGGGTCAGGAGAAG +
Preference number: 2 (lower is better)
Translates to: FIQESGERSSPPSSTTTARPESR*CLGQEK
Trigger: CTTCTCCTGACCCAGGCACCACCTGCTTTCGGGGCG...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTGAGTGTGTCAGGCTCTaGGAGAGGGGCCTCACGGAG +
Preference number: 2 (lower is better)
Translates to: FIQESGERSSPPSSTTTAECVRL*ERGLTE
Trigger: CTCCGTGAGGCCCCTCTCCCAGAGCCTGACACACTC...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTCTTGGAGGTAGGAACTaGGGGGCAAGCTCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: FIQESGERSSPPSSTTTALGGRN*GASSVG
Trigger: CCCCACAGAGCTTGCCCCTCAGTTCCTACCTCCAAG...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTGCGCTTAGCATCTGGTaGTGCCGCCAGCTGTGTCTG +
Preference number: 2 (lower is better)
Translates to: FIQESGERSSPPSSTTTAALSIW*CRQLCL
Trigger: CAGACACAGCTGGCGGCAGCACCAGATGCTAAGCGC...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTTGGCGTCTTGGAGCGTaGCCAGGGAAGTCTGGGAAC +
Preference number: 2 (lower is better)
Translates to: FIQESGERSSPPSSTTTAWRLGA*PGKSGN
Trigger: GTTCCCAGACTTCCCTGGCCACGCTCCAAGACGCCA...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTAGAAGGAGCCCTTTCTaGACCCCGTGTTCTGCTGGA +
Preference number: 2 (lower is better)
Translates to: FIQESGERSSPPSSTTTARRSPF*TPCSAG
Trigger: TCCAGCAGAACACGGGGTTCAGAAAGGGCTCCTTCT...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTCTGGCACAGCTGAGCTaGGAAGCAACTGTGAGGAGA +
Preference number: 2 (lower is better)
Translates to: FIQESGERSSPPSSTTTALAQLS*EATVRR
Trigger: TCTCCTCACAGTTGCTTCTCAGCTCAGCTGTGCCAG...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTCCGTGCAGGTATTGTTaGTGCAGGACCTGCTGTCTG +
Preference number: 2 (lower is better)
Translates to: FIQESGERSSPPSSTTTAPCRYC*CRTCCL
Trigger: CAGACAGCAGGTCCTGCAGCAACAATACCTGCACGG...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTGTCCCTGTCCCAGAATaGTTTGGGGTGGCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: FIQESGERSSPPSSTTTAVPVPE*FGVAPE
Trigger: TTCAGGAGCCACCCCAAACCATTCTGGGACAGGGAC...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTTTGTCTGACTTCCTGTaGCACTCAGCACTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: FIQESGERSSPPSSTTTALSDFL*HSALPA
Trigger: GGCAGGGAGTGCTGAGTGCCACAGGAAGTCAGACAA...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTTACAGGTCAGTTACGTaGACTCGGCAATCCCTGAGC +
Preference number: 2 (lower is better)
Translates to: FIQESGERSSPPSSTTTAYRSVT*TRQSLS
Trigger: GCTCAGGGATTGCCGAGTCCACGTAACTGACCTGTA...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR TCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTATCAAGGGTGGGAGATaGGGAATGGGATCAGATATC +
Preference number: 2 (lower is better)
Translates to: FIQESGERSSPPSSTTTAIKGGR*GMGSDI
Trigger: GATATCTGATCCCATTCCTCATCTCCCACCCTTGAT...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR GCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTCCTGACCACCTTTGCTaGAATCCTAGTACATCTCTC +
Preference number: 2 (lower is better)
Translates to: FIQESGERSSPPSSTTTAPDHLC*NPSTSL
Trigger: GAGAGATGTACTAGGATTGCAGCAAAGGTGGTCAGG...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 72 bp AGGGACTGGGCTTCAGATGGGGCTCAGCTGCAGCTCTaGACGGGGGCACAGCACCCTGGCTGGGATGGGCAG +
Preference number: 3 (lower is better)
Translates to: RDWASDGAQLQL*TGAQHPGWDGQ
Trigger: CTGCCCATCCCAGCCAGGGTGCTGTGCCCCCGTCCAGAGCTGCAGCTGAGCCCCATCTGAAGCCCAGTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 72 bp TGTGTCAGGCTCTGGGAGAGGGGCCTCACGGAGAGTTaGAGCAGGCACGGAACCGCCAACACCCAGGCCGCC +
Preference number: 3 (lower is better)
Translates to: CVRLWERGLTES*SRHGTANTQAA
Trigger: GGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTCTCCCAGAGCCTGACACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCAGCCACCATCCTTCCCTaGCCCAACCCCGGGGGCTAC +
Preference number: 3 (lower is better)
Translates to: WSRHGTANTQAANATSHAATILP*PNPGGY
Trigger: GTAGCCCCCGGGGTTGGGCAAGGGAAGGATGGTGGC...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR TCA 72 bp GCAGGAACAGCCCAGGCACAAGGCCGGGCTTCAGTCTaGCTGGACCAGCAGCGGAGGGGCCACTTCTGGCCA +
Preference number: 3 (lower is better)
Translates to: AGTAQAQGRASV*LDQQRRGHFWP
Trigger: TGGCCAGAAGTGGCCCCTCCGCTGCTGGTCCAGTCAGACTGAAGCCCGGCCTTGTGCCTGGGCTGTTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 72 bp CCCTTCATGACCTCTGGAGGGCCACCATCCTTCCCTTaGCCAACCCCGGGGGCTACAGCATCCCACGCTCCC +
Preference number: 3 (lower is better)
Translates to: PFMTSGGPPSFP*PTPGATASHAP
Trigger: GGGAGCGTGGGATGCTGTAGCCCCCGGGGTTGGGCAAGGGAAGGATGGTGGCCCTCCAGAGGTCATGAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 72 bp CACTTGGCCCTGACCACAGGCAGGCCCCAGACGGGGTaGCAAGCTGGACTTTGCCCAGGCAGGAGAGGAGAC +
Preference number: 3 (lower is better)
Translates to: HLALTTGRPQTG*QAGLCPGRRGD
Trigger: GTCTCCTCTCCTGCCTGGGCAAAGTCCAGCTTGGCACCCCGTCTGGGGCCTGCCTGTGGTCAGGGCCAAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 72 bp CCTGCTGTCTGCAGCTCCGAGGGACTGGGCTTCAGATaGGGCTCAGCTGCAGCTCTGGACGGGGGCACAGCA +
Preference number: 3 (lower is better)
Translates to: PAVCSSEGLGFR*GSAAALDGGTA
Trigger: TGCTGTGCCCCCGTCCAGAGCTGCAGCTGAGCCCCATCTGAAGCCCAGTCCCTCGGAGCTGCAGACAGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 72 bp CCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCCTGTaGAGCCCCACCCTTGTCTGGCTGCCAACAAGGGTC +
Preference number: 3 (lower is better)
Translates to: PNWVVVGRLCCL*SPTLVWLPTRV
Trigger: GACCCTTGTTGGCAGCCAGACAAGGGTGGGGCTCCACAGGCAGCACAGGCGCCCCACCACCACCCAGTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 72 bp ACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTaGCCAGGGAAGTCTGGGAACAGCAGTCGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: TKCPRQSWRLGA*PGKSGNSSRLG
Trigger: CCCCAGCCGACTGCTGTTCCCAGACTTCCCTGGCCACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTTGTGGAGCCCCACCCTaGTCTGGCTGCCAACAAGGG +
Preference number: 3 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPCGAPP*SGCQQG
Trigger: CCCTTGTTGGCAGCCAGACAAGGGTGGGGCTCCACA...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR TCA 72 bp TCACCTGACCCAGTGCTTCTCCCAGGGAGCTGGCCTTaGCTGCCTCGCTGTGCGGCCCATCACCCTGACCAC +
Preference number: 3 (lower is better)
Translates to: SPDPVLLPGSWP*LPRCAAHHPDH
Trigger: GTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGCTCCCTGGGAGAAGCACTGGGTCAGGTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR TCA 72 bp CAGGAGAGGAGACGTCTGGGAGGGTTTTGGCTGGGCTaGGTAGCGGACGCTGAGCTCCTGACCCCCGAGCCT +
Preference number: 3 (lower is better)
Translates to: QERRRLGGFWLG*VADAELLTPEP
Trigger: AGGCTCGGGGGTCAGGAGCTCAGCGTCCGCTACTCAGCCCAGCCAAAACCCTCCCAGACGTCTCCTCTCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR TCA 72 bp GCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTaGTTTCGCACCCGAGGCGACACGGAGGGTTACAGC +
Preference number: 3 (lower is better)
Translates to: AAGPPRDGVRWV*FRTRGDTEGYS
Trigger: GCTGTAACCCTCCGTGTCGCCTCGGGTGCGAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 72 bp GGCCAGTTCAGCCTCTCTCCCCTGCTCGTCCAGACATaGCCCCGTGTGTTCAGGGCCCAGCTTCTGCTCCAC +
Preference number: 3 (lower is better)
Translates to: GQFSLSPLLVQT*PRVFRAQLLLH
Trigger: GTGGAGCAGAAGCTGGGCCCTGAACACACGGGGCCATGTCTGGACGAGCAGGGGAGAGAGGCTGAACTGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 72 bp GAACAGCCCAGGCACAAGGCCGGGCTTCAGTCTGACTaGACCAGCAGCGGAGGGGCCACTTCTGGCCAGTTC +
Preference number: 3 (lower is better)
Translates to: EQPRHKAGLQSD*TSSGGATSGQF
Trigger: GAACTGGCCAGAAGTGGCCCCTCCGCTGCTGGTCCAGTCAGACTGAAGCCCGGCCTTGTGCCTGGGCTGTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 72 bp TGGCAGCTGGAGCCACAGAGGTCCCTTCATGACCTCTaGAGGGCCACCATCCTTCCCTTGCCCAACCCCGGG +
Preference number: 3 (lower is better)
Translates to: WQLEPQRSLHDL*RATILPLPNPG
Trigger: CCCGGGGTTGGGCAAGGGAAGGATGGTGGCCCTCCAGAGGTCATGAAGGGACCTCTGTGGCTCCAGCTGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 72 bp CAGCATGCACTGGCCAGAGGGATGCAGACAGGTGCCTaGGAGGAGGCTACGGCCATCGCCCCGAAAGCAGGT +
Preference number: 3 (lower is better)
Translates to: QHALARGMQTGA*EEATAIAPKAG
Trigger: ACCTGCTTTCGGGGCGATGGCCGTAGCCTCCTCCCAGGCACCTGTCTGCATCCCTCTGGCCAGTGCATGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCAAAGCCGTGCAGGTATaGTTGCTGCAGGACCTGCTG +
Preference number: 3 (lower is better)
Translates to: EGPHGELEQARNRQHPGRKAVQV*LLQDLL
Trigger: CAGCAGGTCCTGCAGCAACAATACCTGCACGGCTTT...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 72 bp AGACACCTCCTCTCTGAAGCGCTTAGCATCTGGTGCTaGCGCCAGCTGTGTCTGGCAGCTGTCCCCCAGGGG +
Preference number: 3 (lower is better)
Translates to: RHLLSEALSIWC*RQLCLAAVPQG
Trigger: CCCCTGGGGGACAGCTGCCAGACACAGCTGGCGGCAGCACCAGATGCTAAGCGCTTCAGAGAGGAGGTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 72 bp GGCAGACACCTCCTCTCTGAAGCGCTTAGCATCTGGTaGTGCCGCCAGCTGTGTCTGGCAGCTGTCCCCCAG +
Preference number: 3 (lower is better)
Translates to: GRHLLSEALSIW*CRQLCLAAVPQ
Trigger: CTGGGGGACAGCTGCCAGACACAGCTGGCGGCAGCACCAGATGCTAAGCGCTTCAGAGAGGAGGTGTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 72 bp CTGACCCAGTGCTTCTCCCAGGGAGCTGGCCTTGACTaGCTCGCTGTGCGGCCCATCACCCTGACCACCTTT +
Preference number: 3 (lower is better)
Translates to: LTQCFSQGAGLD*LAVRPITLTTF
Trigger: AAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGCTCCCTGGGAGAAGCACTGGGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 72 bp CCCAGGCCGCCAACGCAACTTCCCATGCATGGGCCCTaGAGGCATGGAGGACACCGTGAGAACAAAGTGCCC +
Preference number: 3 (lower is better)
Translates to: PRPPTQLPMHGP*RHGGHRENKVP
Trigger: GGGCACTTTGTTCTCACGGTGTCCTCCATGCCTGCAGGGCCCATGCATGGGAAGTTGCGTTGGCGGCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 72 bp AACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATaGATGGGCCCTGCAGGCATGGAGGACACCGTGAGA +
Preference number: 3 (lower is better)
Translates to: NRQHPGRQRNFP*MGPAGMEDTVR
Trigger: TCTCACGGTGTCCTCCATGCCTGCAGGGCCCATGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 72 bp GGCAGGACCAGCCTGGACCGTTCCCACAGGGCCTCGTaGAGTACAGGTCAGTTACGTGGACTCGGCAATCCC +
Preference number: 3 (lower is better)
Translates to: GRTSLDRSHRAS*STGQLRGLGNP
Trigger: GGGATTGCCGAGTCCACGTAACTGACCTGTACTCCACGAGGCCCTGTGGGAACGGTCCAGGCTGGTCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 72 bp GAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTaGCGTCTTGGAGCGTGGCCAGGGAAGTCTGGGAAC +
Preference number: 3 (lower is better)
Translates to: EDTVRTKCPRQS*RLGAWPGKSGN
Trigger: GTTCCCAGACTTCCCTGGCCACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 72 bp GGGCGGCCTTCGAGGGTAGGGGGATTCTCACTGGAGTaGCTCAATGAGGATCTTGCAGGAGGCCGGCAGGGT +
Preference number: 3 (lower is better)
Translates to: GRPSRVGGFSLE*LNEDLAGGRQG
Trigger: ACCCTGCCGGCCTCCTGCAAGATCCTCATTGAGCCACTCCAGTGAGAATCCCCCTACCCTCGAAGGCCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTGCCACCATCCTTCCCTaGCCCAACCCCGGGGGCTAC +
Preference number: 3 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQAATILP*PNPGGY
Trigger: GTAGCCCCCGGGGTTGGGCAAGGGAAGGATGGTGGC...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGCTGTCCCAGAATGGTTaGGGGTGGCTCCTGAACTGC +
Preference number: 3 (lower is better)
Translates to: CAPGALALPAPSPREGLLLSQNG*GWLLNC
Trigger: GCAGTTCAGGAGCCACCCCAAACCATTCTGGGACAG...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTCTGTCCCAGAATGGTTaGGGGTGGCTCCTGAACTGC +
Preference number: 3 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPLSQNG*GWLLNC
Trigger: GCAGTTCAGGAGCCACCCCAAACCATTCTGGGACAG...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCACGCCGGCAGTGGTTCTaGTTCTTGCTGTCACTTGGG +
Preference number: 3 (lower is better)
Translates to: WSRHGTANTQAANATSHARRQWF*FLLSLG
Trigger: CCCAAGTGACAGCAAGAACAAGAACCACTGCCGGCG...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR TCA 72 bp CCAGGGTTGGCAGCTGGAGCCACAGAGGTCCCTTCATaGCCTCTGGAGGGCCACCATCCTTCCCTTGCCCAA +
Preference number: 3 (lower is better)
Translates to: PGLAAGATEVPS*PLEGHHPSLAQ
Trigger: TTGGGCAAGGGAAGGATGGTGGCCCTCCAGAGGTCATGAAGGGACCTCTGTGGCTCCAGCTGCCAACCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR TCA 72 bp GGAGCCCTTTCTGAACCCCGTGTTCTGCTGGACGGTTaGGAGGCTCCAGTGGCAGGCACATGTGAGTCCCCC +
Preference number: 3 (lower is better)
Translates to: GALSEPRVLLDG*EAPVAGTCESP
Trigger: GGGGGACTCACATGTGCCTGCCACTGGAGCCTCTCAACCGTCCAGCAGAACACGGGGTTCAGAAAGGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR TCA 72 bp CCGAGGCGACACGGAGGGTTACAGCAGGCGGCCTCCTaGCTACAGGGCATGAGGAGGGTAAAGGCTTTCCTG +
Preference number: 3 (lower is better)
Translates to: PRRHGGLQQAAS*LQGMRRVKAFL
Trigger: CAGGAAAGCCTTTACCCTCCTCATGCCCTGTAGTCAGGAGGCCGCCTGCTGTAACCCTCCGTGTCGCCTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 72 bp GAGGCTACGGCCATCGCCCCGAAAGCAGGTGGTGCCTaGGTCAGGAGAAGGTGTCTGGATAGGTTCAGGAGG +
Preference number: 3 (lower is better)
Translates to: EATAIAPKAGGA*VRRRCLDRFRR
Trigger: CCTCCTGAACCTATCCAGACACCTTCTCCTGACCCAGGCACCACCTGCTTTCGGGGCGATGGCCGTAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCGCCGTGCAGGTATTGTaGCTGCAGGACCTGCTGTCT +
Preference number: 3 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFAVQVL*LQDLLS
Trigger: AGACAGCAGGTCCTGCAGCAACAATACCTGCACGGC...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGGGGTGTTTAGGCTCCTaGACGTACCAGCACTGCGTG +
Preference number: 3 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRGCLGS*TYQHCV
Trigger: CACGCAGTGCTGGTACGTCAAGGAGCCTAAACACCC...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGCAGTGGTTCTTGTTCTaGCTGTCACTTGGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: GGHRENKVPAAELASWSVQWFLF*LSLGPG
Trigger: CCCAGGCCCAAGTGACAGCAAGAACAAGAACCACTG...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR TCA 72 bp GTGCCCCTCCCTCTGTCCTCATGCCGTGTGCTCTGCTaGCACCCTTCAGTGGTCACAGGGCACATGACTCTG +
Preference number: 3 (lower is better)
Translates to: VPLPLSSCRVLC*HPSVVTGHMTL
Trigger: CAGAGTCATGTGCCCTGTGACCACTGAAGGGTGTCAGCAGAGCACACGGCATGAGGACAGAGGGAGGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 72 bp AGCCGTGCAGGTATTGTTGCTGCAGGACCTGCTGTCTaGAGCTCCGAGGGACTGGGCTTCAGATGGGGCTCA +
Preference number: 3 (lower is better)
Translates to: SRAGIVAAGPAV*SSEGLGFRWGS
Trigger: TGAGCCCCATCTGAAGCCCAGTCCCTCGGAGCTGCAGACAGCAGGTCCTGCAGCAACAATACCTGCACGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCAAAGCCGTGCAGGTATaGTTGCTGCAGGACCTGCTG +
Preference number: 3 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFKAVQV*LLQDLL
Trigger: CAGCAGGTCCTGCAGCAACAATACCTGCACGGCTTT...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCACGTGGAAGGGCTGGTaGTGCATGAGAGCAGGAACA +
Preference number: 3 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFTWKGW*CMRAGT
Trigger: TGTTCCTGCTCTCATGCACAACCAGCCCTTCCACGT...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp GGATTCTCACTGGAGTGGCTCAATGAGGATCTTGCAGGAGGCCGGCAGGGTGATTGTGGAGCCCCACCCTaGTCTGGCTGCCAACAAGGG +
Preference number: 3 (lower is better)
Translates to: GFSLEWLNEDLAGGRQGDCGAPP*SGCQQG
Trigger: CCCTTGTTGGCAGCCAGACAAGGGTGGGGCTCCACA...ATCACCCTGCCGGCCTCCTGCAAGATCCTCATTGAGCCACTCCAGTGAGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCAGTGGTTCTTGTTCTaGCTGTCACTTGGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVQWFLF*LSLGPG
Trigger: CCCAGGCCCAAGTGACAGCAAGAACAAGAACCACTG...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 72 bp TCCAGACATGGCCCCGTGTGTTCAGGGCCCAGCTTCTaGTCCACATCTCTGGGCAGACACCTCCTCTCTGAA +
Preference number: 3 (lower is better)
Translates to: SRHGPVCSGPSF*STSLGRHLLSE
Trigger: TTCAGAGAGGAGGTGTCTGCCCAGAGATGTGGAGCAGAAGCTGGGCCCTGAACACACGGGGCCATGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 72 bp AGTGGTTCTTGTTCTTGCTGTCACTTGGGCCTGGGCTaGCCTCCCTGGCTCTTGGTAAGTCACCCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: SGSCSCCHLGLG*PPWLLVSHPLP
Trigger: GGGCAGAGGGTGACTTACCAAGAGCCAGGGAGGGCAGCCCAGGCCCAAGTGACAGCAAGAACAAGAACCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 72 bp CCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTaGAATCCTAGTACATCTCTCAGTGCACGGAGGCCT +
Preference number: 3 (lower is better)
Translates to: PRCAAHHPDHLC*NPSTSLSARRP
Trigger: AGGCCTCCGTGCACTGAGAGATGTACTAGGATTGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 72 bp CTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTaGTGCAATCCTAGTACATCTCTCAGTGCACGGAGG +
Preference number: 3 (lower is better)
Translates to: LPRCAAHHPDHL*CNPSTSLSARR
Trigger: CCTCCGTGCACTGAGAGATGTACTAGGATTGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 72 bp GGGAAGGACACACACCAAGTCTGTGCACGCCGGCAGTaGTTCTTGTTCTTGCTGTCACTTGGGCCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: GKDTHQVCARRQ*FLFLLSLGPGL
Trigger: CAGCCCAGGCCCAAGTGACAGCAAGAACAAGAACCACTGCCGGCGTGCACAGACTTGGTGTGTGTCCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 72 bp CGAAAGCAGGTGGTGCCTGGGTCAGGAGAAGGTGTCTaGATAGGTTCAGGAGGTGGGACCGGGTGGGATTCA +
Preference number: 3 (lower is better)
Translates to: RKQVVPGSGEGV*IGSGGGTGWDS
Trigger: TGAATCCCACCCGGTCCCACCTCCTGAACCTATCCAGACACCTTCTCCTGACCCAGGCACCACCTGCTTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp AATGTCCTGAGCTCTGCTGCGGCCTCTAGAGTTGGGGTGATCATGGCGACCCTCGCCGTGCAGGTATTGTaGCTGCAGGACCTGCTGTCT +
Preference number: 3 (lower is better)
Translates to: NVLSSAAASRVGVIMATLAVQVL*LQDLLS
Trigger: AGACAGCAGGTCCTGCAGCAACAATACCTGCACGGC...GAGGGTCGCCATGATCACCCCAACTCTAGAGGCCGCAGCAGAGCTCAGGACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp AATGTCCTGAGCTCTGCTGCGGCCTCTAGAGTTGGGGTGATCATGGCGACCCTCCGCCGGCAGTGGTTCTaGTTCTTGCTGTCACTTGGG +
Preference number: 3 (lower is better)
Translates to: NVLSSAAASRVGVIMATLRRQWF*FLLSLG
Trigger: CCCAAGTGACAGCAAGAACAAGAACCACTGCCGGCG...GAGGGTCGCCATGATCACCCCAACTCTAGAGGCCGCAGCAGAGCTCAGGACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTACGTGGAAGGGCTGGTaGTGCATGAGAGCAGGAACA +
Preference number: 3 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQATWKGW*CMRAGT
Trigger: TGTTCCTGCTCTCATGCACAACCAGCCCTTCCACGT...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTCTCTGTCATCCAAGCTaGAGTGCAGCAGCGCCATCT +
Preference number: 3 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQALCHPS*SAAAPS
Trigger: AGATGGCGCTGCTGCACTCAAGCTTGGATGACAGAG...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTCCACACTCTCCTTCCTaGTCTGACTTCCTGTGGCAC +
Preference number: 3 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQAPHSPS*SDFLWH
Trigger: GTGCCACAGGAAGTCAGACAAGGAAGGAGAGTGTGG...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 72 bp AGGTTTACGTGTGCAAAGCCGTGCAGGTATTGTTGCTaGAGGACCTGCTGTCTGCAGCTCCGAGGGACTGGG +
Preference number: 3 (lower is better)
Translates to: RFTCAKPCRYCC*RTCCLQLRGTG
Trigger: CCCAGTCCCTCGGAGCTGCAGACAGCAGGTCCTGCAGCAACAATACCTGCACGGCTTTGCACACGTAAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 72 bp AGAGTTCTGGGCTTCAGGGGTCAGGCAAGAGGGCTGTaGGCAGCTGACCTGACTCAACAAGATCCTGGCACA +
Preference number: 3 (lower is better)
Translates to: RVLGFRGQARGL*AADLTQQDPGT
Trigger: TGTGCCAGGATCTTGTTGAGTCAGGTCAGCTGCCCACAGCCCTCTTGCCTGACCCCTGAAGCCCAGAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 72 bp CCTAGGTTTACGTGTGCAAAGCCGTGCAGGTATTGTTaGTGCAGGACCTGCTGTCTGCAGCTCCGAGGGACT +
Preference number: 3 (lower is better)
Translates to: PRFTCAKPCRYC*CRTCCLQLRGT
Trigger: AGTCCCTCGGAGCTGCAGACAGCAGGTCCTGCAGCAACAATACCTGCACGGCTTTGCACACGTAAACCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 72 bp CTGCAACCTCCACCTCCCGGGCTTAGACGATTCTCCTaGCTCAGCCTCCCGAGTAGATGGAATTACTGGCAT +
Preference number: 3 (lower is better)
Translates to: LQPPPPGLRRFS*LSLPSRWNYWH
Trigger: ATGCCAGTAATTCCATCTACTCGGGAGGCTGAGGCAGGAGAATCGTCTAAGCCCGGGAGGTGGAGGTTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CCA 72 bp TGGGTCAGGAGAAGGTGTCTGGATAGGTTCAGGAGGTaGGACCGGGTGGGATTCAGAGGAAGGTGTGAAGGA +
Preference number: 3 (lower is better)
Translates to: WVRRRCLDRFRR*DRVGFRGRCEG
Trigger: TCCTTCACACCTTCCTCTGAATCCCACCCGGTCCCACCTCCTGAACCTATCCAGACACCTTCTCCTGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR TCA 72 bp GCTCAGTGTTCGCTAAATAGCAGAAGGAGCCCTTTCTaGACCCCGTGTTCTGCTGGACGGTTGAGAGGCTCC +
Preference number: 3 (lower is better)
Translates to: AQCSLNSRRSPF*TPCSAGRLRGS
Trigger: GGAGCCTCTCAACCGTCCAGCAGAACACGGGGTTCAGAAAGGGCTCCTTCTGCTATTTAGCGAACACTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR GCA 72 bp CGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTaGAGGTATTGTTGCTGCAGGACCTGCTGTCTGCAG +
Preference number: 3 (lower is better)
Translates to: RVDQPRFTCAKP*RYCCCRTCCLQ
Trigger: CTGCAGACAGCAGGTCCTGCAGCAACAATACCTGCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTGGTGATGTGCCTGCCTaGGCCTCCCAATGTGCTAGG +
Preference number: 3 (lower is better)
Translates to: FIQESGERSSPPSSTTTAGDVPA*ASQCAR
Trigger: CCTAGCACATTGGGAGGCCAAGGCAGGCACATCACC...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR-3UTR CAA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTCTCTGTCATCCAAGCTaGAGTGCAGCAGCGCCATCT +
Preference number: 3 (lower is better)
Translates to: FIQESGERSSPPSSTTTALCHPS*SAAAPS
Trigger: AGATGGCGCTGCTGCACTCAAGCTTGGATGACAGAG...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCGGGGCTCCCTGGGTTTaGCGGGTCGCGGGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCGAPWV*RVAGPR
Trigger: GCGGGGACCCGCGACCCGTCAAACCCAGGGAGCCCC...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCGGTCCCCGCCCAGGCTaGGGGACAGCGAGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCGPRPG*GTASQG
Trigger: TCCCTGGCTCGCTGTCCCGCAGCCTGGGCGGGGACC...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAAGGCGGAGCGGGCTaGGCGGGTTGGGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: EGPHGELEQARNRQHPGRQGGAG*AGWGSC
Trigger: GCAGGACCCCCAACCCGCCCAGCCCGCTCCGCCTTG...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCCAGGGAGCTGGCCTTaGCTGCCTCGCTGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: EGPHGELEQARNRQHPGRPGSWP*LPRCAA
Trigger: GGCCGCACAGCGAGGCAGTCAAGGCCAGCTCCCTGG...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCGACCACAGGTCGGGGTaGGGGGTGCCTGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: EGPHGELEQARNRQHPGRDHRSG*GVPGLQ
Trigger: CTGCAGCCCAGGCACCCCGCACCCCGACCTGTGGTC...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCGTGGTGGGGCGCCTGTaGTGCCTGTGGAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCVVGRL*CLWSPT
Trigger: GGTGGGGCTCCACAGGCAGCACAGGCGCCCCACCAC...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCTGGGCTGCAGGCTGCTaGAAGGGCTCCGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCWAAGC*KGSGLG
Trigger: CCCCAGCCCGGAGCCCTTCCAGCAGCCTGCAGCCCA...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp AGCAAGCACAGGGGCGGCGCCTGGGTGGGCGCTTCCAGGACCCTCCCCCTTGGACCATCCCGGAGAGGCTaGCCCATAACAGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SKHRGGAWVGASRTLPLGPSRRG*PITGAR
Trigger: CCTGGCCCCTGTTATGGGTCAGCCTCTCCGGGATGG...TCCAAGGGGGAGGGTCCTGGAAGCGCCCACCCAGGCGCCGCCCCTGTGCTTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGCGCAGGAGCTGGGCTTaGGTCCTGCGGGGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: CAPGALALPAPSPREGLLRRSWA*VLRGPE
Trigger: CTCGGGCCCCCGCAGGACCCAAGCCCAGCTCCTGCG...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp AGCAAGCACAGGGGCGGCGCCTGGGTGGGCGCTTCCAGGACCCTCCCCCTTGGACAGCGAGGATGGGGATaGGGTCAGGCCTCGTCGAGG +
Preference number: 4 (lower is better)
Translates to: SKHRGGAWVGASRTLPLGQRGWG*GQASSR
Trigger: CCTCGACGAGGCCTGACCCCATCCCCATCCTCGCTG...TCCAAGGGGGAGGGTCCTGGAAGCGCCCACCCAGGCGCCGCCCCTGTGCTTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCGCCTGGAGGGCCCGGTaGAGCTTCCAGACCACAGGT +
Preference number: 4 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCAWRAR*SFQTTG
Trigger: ACCTGTGGTCTGGAAGCTTCACCGGGCCCTCCAGGC...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCGCAGGACCTGCTGTCTaGAGCTCCGAGGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCAGPAV*SSEGLG
Trigger: GCCCAGTCCCTCGGAGCTGCAGACAGCAGGTCCTGC...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGCTGACCCCCGAGCCTTaGCCCAGGGCCCCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: CAPGALALPAPSPREGLLLTPEP*PRAPSF
Trigger: GAAGGAGGGGGCCCTGGGGCAAGGCTCGGGGGTCAG...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCAGTTGGGGGTCCTGCCTaGAGCGGAGTCGCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: AGLDCLAVRPITLTTFAAVGGPA*SGVAAR
Trigger: CCGGGCCGCGACTCCGCTCCAGGCAGGACCCCCAAC...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGCGGGGGCCCGAGTGTTaGCGGCCACCATCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: CAPGALALPAPSPREGLLRGPEC*RPPSRR
Trigger: TCTCCGGGATGGTGGCCGCCAACACTCGGGCCCCCG...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTCCCACTCGCAGGAGCTaGGCTTGGGTCCTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPPTRRS*AWVLRG
Trigger: CCCCCGCAGGACCCAAGCCCAGCTCCTGCGAGTGGG...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCGGTCCCCAAACTGGGTaGTGGTGGGGCGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCGPQTG*WWGACA
Trigger: AGCACAGGCGCCCCACCACCACCCAGTTTGGGGACC...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCGGCCTCACGGAGAGTTaGAGCAGGCACGGAACCGCC +
Preference number: 4 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCGLTES*SRHGTA
Trigger: GGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCC...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp AGCAAGCACAGGGGCGGCGCCTGGGTGGGCGCTTCCAGGACCCTCCCCCTTGGAGAGTGTGTCAGGCTCTaGGAGAGGGGCCTCACGGAG +
Preference number: 4 (lower is better)
Translates to: SKHRGGAWVGASRTLPLGECVRL*ERGLTE
Trigger: CTCCGTGAGGCCCCTCTCCCAGAGCCTGACACACTC...TCCAAGGGGGAGGGTCCTGGAAGCGCCCACCCAGGCGCCGCCCCTGTGCTTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp CCTCGTGGAGTACAGGTCAGTTACGTGGACTCGGCAATCCCTGAGCTCGGGGAGGGGGCTCCCTGGGTTTaGCGGGTCGCGGGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PRGVQVSYVDSAIPELGEGAPWV*RVAGPR
Trigger: GCGGGGACCCGCGACCCGTCAAACCCAGGGAGCCCC...CTCCCCGAGCTCAGGGATTGCCGAGTCCACGTAACTGACCTGTACTCCACGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCGGACTCGGCAATCCCTaGGCTCGGGGAGCAAGCACA +
Preference number: 4 (lower is better)
Translates to: EGPHGELEQARNRQHPGRGLGNP*ARGAST
Trigger: TGTGCTTGCTCCCCGAGCTCAGGGATTGCCGAGTCC...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCGCATGGAGGACACCGTaGGAACAAAGTGCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCAWRTP*EQSARG
Trigger: GCCGCGGGCACTTTGTTCTCACGGTGTCCTCCATGC...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTGCGGGTTGGGGGTCCTaGCTGGAGCGGAGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVAGWGS*LERSRG
Trigger: GCCGCGACTCCGCTCCAGGCAGGACCCCCAACCCGC...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCCGGTGGCTGAGATTCTaGACCTGGCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCRWLRF*TWQVPS
Trigger: GCTGGGCACCTGCCAGGTGCAGAATCTCAGCCACCG...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTACAGGAGCTGAGTCCTaGCGGCCGGCCGGTCCCATG +
Preference number: 4 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPTGAES*RPAGPM
Trigger: CATGGGACCGGCCGGCCGGCAGGACTCAGCTCCTGT...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp AGCAAGCACAGGGGCGGCGCCTGGGTGGGCGCTTCCAGGACCCTCCCCCTTGGACTCCTTCACTCCCCGTaGCCCTCCCTCTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SKHRGGAWVGASRTLPLGLLHSP*PSLCPH
Trigger: ATGAGGACAGAGGGAGGGGCACGGGGAGTGAAGGAG...TCCAAGGGGGAGGGTCCTGGAAGCGCCCACCCAGGCGCCGCCCCTGTGCTTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCAAGGCGGAGCGGGCTaGGCGGGTTGGGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRQGGAG*AGWGSC
Trigger: GCAGGACCCCCAACCCGCCCAGCCCGCTCCGCCTTG...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCCGGAGGGGCCACTTCTaGCCAGTTCAGCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCRRGHF*PVQPLS
Trigger: GGAGAGAGGCTGAACTGGCCAGAAGTGGCCCCTCCG...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCCGCACCTGGTCCCACTaGGTCCCCAAACTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCRTWSH*VPKLGG
Trigger: ACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGCG...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTGCCCGCGGCAGAGCTaGCGTCTTGGAGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: CAPGALALPAPSPREGLLCPRQS*RLGAWP
Trigger: TGGCCACGCTCCAAGACGCCAGCTCTGCCGCGGGCA...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTTGCCCGCGGCAGAGCTaGCGTCTTGGAGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPCPRQS*RLGAWP
Trigger: TGGCCACGCTCCAAGACGCCAGCTCTGCCGCGGGCA...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCAGGCCGGGCTTCAGTCTaGCTGGACCAGCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: AGLDCLAVRPITLTTFAAGRASV*LDQQRR
Trigger: CCTCCGCTGCTGGTCCAGTCAGACTGAAGCCCGGCC...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCAGGGCTGGTTGTGCATaGGAGCAGGAACAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EGPHGELEQARNRQHPGRRAGCA*EQEQPR
Trigger: CCTGGGCTGTTCCTGCTCTCATGCACAACCAGCCCT...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCTGTGGGGGAATGTCCTaGGCTCTGCTGCGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCCGGMS*ALLRPL
Trigger: TAGAGGCCGCAGCAGAGCTCAGGACATTCCCCCACA...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGGCCTGGGCTGCAGGCTaGTGGAAGGGCTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGAAWAAG*WKGSGL
Trigger: CAGCCCGGAGCCCTTCCAGCAGCCTGCAGCCCAGGC...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTCAGATGGGGCTCAGCTaGAGCTCTGGACGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPQMGLS*SSGRGH
Trigger: GTGCCCCCGTCCAGAGCTGCAGCTGAGCCCCATCTG...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGGGAGCTGGCCTTGACTaGCTCGCTGTGCGGCCCATC +
Preference number: 4 (lower is better)
Translates to: CAPGALALPAPSPREGLLGAGLD*LAVRPI
Trigger: GATGGGCCGCACAGCGAGGCAGTCAAGGCCAGCTCC...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGGCAGCTGGAAGTGGGTaGAGGTGCTGCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CAPGALALPAPSPREGLLAAGSG*RCCWAS
Trigger: GGAGGCCCAGCAGCACCTGCACCCACTTCCAGCTGC...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCAGGAAGGGCTCCGGGCTaGGGGCTCCCTGGGTTTGAC +
Preference number: 4 (lower is better)
Translates to: AGLDCLAVRPITLTTFAAGRAPG*GLPGFD
Trigger: GTCAAACCCAGGGAGCCCCCAGCCCGGAGCCCTTCC...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTTGGGCTGCAGGCTGCTaGAAGGGCTCCGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVWAAGC*KGSGLG
Trigger: CCCCAGCCCGGAGCCCTTCCAGCAGCCTGCAGCCCA...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGGGGGGCACAGCACCCTaGCTGGGATGGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGAGGTAP*LGWAGV
Trigger: CACCCCTGCCCATCCCAGCCAGGGTGCTGTGCCCCC...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGGCTCAGCTGCAGCTCTaGACGGGGGCACAGCACCCT +
Preference number: 4 (lower is better)
Translates to: CAPGALALPAPSPREGLLAQLQL*TGAQHP
Trigger: AGGGTGCTGTGCCCCCGTCCAGAGCTGCAGCTGAGC...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCGCCGCCAGCTGTGTCTaGCAGCTGTCCCCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFAASCV*QLSPRG
Trigger: CCCCCTGGGGGACAGCTGCCAGACACAGCTGGCGGC...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGCCCCAAACTGGGTGGTaGTGGGGCGCCTGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GGHRENKVPAAELASWSVPQTGW*WGACAA
Trigger: GGCAGCACAGGCGCCCCACCACCACCCAGTTTGGGG...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCTGCAGCAGCGCCATCTaGGCTCACTGCAACCTCCAC +
Preference number: 4 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCCSSAI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCCAGATGGCGCTGCTGCA...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCTGGCGTCTTGGAGCGTaGCCAGGGAAGTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: EGPHGELEQARNRQHPGRWRLGA*PGKSGN
Trigger: GTTCCCAGACTTCCCTGGCCACGCTCCAAGACGCCA...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGGCAGGCAGAGGAGGCTaGTGCAACCCAGGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQAGRGG*CNPGRP
Trigger: CGGCCGCCCTGGGTTGCATCAGCCTCCTCTGCCTGC...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGGGCCGGGCTTCAGTCTaGCTGGACCAGCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRGRASV*LDQQRR
Trigger: CCTCCGCTGCTGGTCCAGTCAGACTGAAGCCCGGCC...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTGTTCTGCTGGACGGTTaGGAGGCTCCAGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPVLLDG*EAPVAG
Trigger: GCCTGCCACTGGAGCCTCTCAACCGTCCAGCAGAAC...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCACAGCAGGCGGCCTCCTaGCTACAGGGCATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: WSRHGTANTQAANATSHAQQAAS*LQGMRR
Trigger: CCTCCTCATGCCCTGTAGTCAGGAGGCCGCCTGCTG...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTGGTCGGGGTGCGGGGTaGCTGGGCTGCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQAGRGAG*LGCRLL
Trigger: CAGCAGCCTGCAGCCCAGGCACCCCGCACCCCGACC...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTGGTCGGGGTGCGGGGTaGCTGGGCTGCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GDHGDPRGMAERVTLANIGRGAG*LGCRLL
Trigger: CAGCAGCCTGCAGCCCAGGCACCCCGCACCCCGACC...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGGACCACAGGTCGGGGTaGGGGGTGCCTGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQDHRSG*GVPGLQ
Trigger: CTGCAGCCCAGGCACCCCGCACCCCGACCTGTGGTC...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGACAGGAGCTGAGTCCTaGCGGCCGGCCGGTCCCATG +
Preference number: 4 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGATGAES*RPAGPM
Trigger: CATGGGACCGGCCGGCCGGCAGGACTCAGCTCCTGT...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGGCAGGACCTGCTGTCTaGAGCTCCGAGGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: GGHRENKVPAAELASWSVAGPAV*SSEGLG
Trigger: GCCCAGTCCCTCGGAGCTGCAGACAGCAGGTCCTGC...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCTCAGGGCCCAGCTTCTaGTCCACATCTCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCSGPSF*STSLGR
Trigger: TCTGCCCAGAGATGTGGAGCAGAAGCTGGGCCCTGA...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCACACCCAGCCCTGCCCTaGCCTGGGGTAGAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: WSRHGTANTQAANATSHAHPALP*PGVERG
Trigger: ACCCCTTTCTACCCCAGGGCAGGGCAGGGCTGGGTG...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCTGAACCCCGTGTTCTaGTGGACGGTTGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: EGPHGELEQARNRQHPGRLNPVF*WTVERL
Trigger: GAGCCTCTCAACCGTCCAGCAGAACACGGGGTTCAG...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGCAGCCACGCCTCCTGTaGACCTGGGGCCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: GGHRENKVPAAELASWSVQPRLL*TWGLGT
Trigger: AGTGCCAAGGCCCCAGGTGCACAGGAGGCGTGGCTG...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCAGTTGCCACAGGCGGTaGCTGAGATTCTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCSCHRR*LRFCTW
Trigger: CCAGGTGCAGAATCTCAGCCACCGCCTGTGGCAACT...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGGCCGCCAGCTGTGTCTaGCAGCTGTCCCCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQAASCV*QLSPRG
Trigger: CCCCCTGGGGGACAGCTGCCAGACACAGCTGGCGGC...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCAGGGCTTCAGTCTGACTaGACCAGCAGCGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: WSRHGTANTQAANATSHAGLQSD*TSSGGA
Trigger: GGCCCCTCCGCTGCTGGTCCAGTCAGACTGAAGCCC...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCAGGGCTTCAGTCTGACTaGACCAGCAGCGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: AGLDCLAVRPITLTTFAAGLQSD*TSSGGA
Trigger: GGCCCCTCCGCTGCTGGTCCAGTCAGACTGAAGCCC...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCTCCCTTCATGACCTCTaGAGGGCCACCATCCTTCCC +
Preference number: 4 (lower is better)
Translates to: EGPHGELEQARNRQHPGRSLHDL*RATILP
Trigger: GGGAAGGATGGTGGCCCTCCAGAGGTCATGAAGGGA...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTATGGCCACCTCGGTCTaGGCTCCAGGGTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPMATSV*APGLAA
Trigger: AGCTGCCAACCCTGGAGCCCAGACCGAGGTGGCCAT...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCGAGGGGCAAGCTCTGTaGGGGAATGTCCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: EGPHGELEQARNRQHPGREGQAL*GNVLSS
Trigger: AGAGCTCAGGACATTCCCCCACAGAGCTTGCCCCTC...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCGAGGGGCAAGCTCTGTaGGGGAATGTCCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCEGQAL*GNVLSS
Trigger: AGAGCTCAGGACATTCCCCCACAGAGCTTGCCCCTC...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTCACAGGGGCGGCGCCTaGGTGGGCGCTTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQAHRGGA*VGASRT
Trigger: GGTCCTGGAAGCGCCCACCCAGGCGCCGCCCCTGTG...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTCACAGGGGCGGCGCCTaGGTGGGCGCTTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: GDHGDPRGMAERVTLANIHRGGA*VGASRT
Trigger: GGTCCTGGAAGCGCCCACCCAGGCGCCGCCCCTGTG...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCGTGCTCAGCATGCACTaGCCAGAGGGATGCAGACAG +
Preference number: 4 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCVLSMH*PEGCRQ
Trigger: CTGTCTGCATCCCTCTGGCCAGTGCATGCTGAGCAC...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGCAGCGAGGATGGGGATaGGGTCAGGCCTCGTCGAGG +
Preference number: 4 (lower is better)
Translates to: GGHRENKVPAAELASWSVQRGWG*GQASSR
Trigger: CCTCGACGAGGCCTGACCCCATCCCCATCCTCGCTG...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp CCTCGTGGAGTACAGGTCAGTTACGTGGACTCGGCAATCCCTGAGCTCGGGGAGCGGGCCCAGCGAGGATaGGGATGGGGTCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PRGVQVSYVDSAIPELGERAQRG*GWGQAS
Trigger: CGAGGCCTGACCCCATCCCCATCCTCGCTGGGCCCG...CTCCCCGAGCTCAGGGATTGCCGAGTCCACGTAACTGACCTGTACTCCACGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTGCCACAGGCGGTGGCTaGGATTCTGCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVATGGG*DSAPGR
Trigger: CCTGCCAGGTGCAGAATCTCAGCCACCGCCTGTGGC...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGCTCACCCCCTTCAGGTaGGGTGGGTCTAGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: GGHRENKVPAAELASWSVLTPFR*GGSSRA
Trigger: AGCCCGACTAGACCCACCTCACCTGAAGGGGGTGAG...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCACTCACCCCCTTCAGGTaGGGTGGGTCTAGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: AGLDCLAVRPITLTTFAALTPFR*GGSSRA
Trigger: AGCCCGACTAGACCCACCTCACCTGAAGGGGGTGAG...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGCCTCTAGAGTTGGGGTaGTCATGGCGACCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: CAPGALALPAPSPREGLLPLELG*SWRPSW
Trigger: CCACGAGGGTCGCCATGATCACCCCAACTCTAGAGG...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTCCAGGGAGCTGGCCTTaGCTGCCTCGCTGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: GDHGDPRGMAERVTLANIPGSWP*LPRCAA
Trigger: GGCCGCACAGCGAGGCAGTCAAGGCCAGCTCCCTGG...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GAAAGGGGTGTCCCTGTCCCAGAATGGTTTGGGGTGGCTCCTGAACTGCTGAGTGCGGGTTGGGGGTCCTaGCTGGAGCGGAGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: ERGVPVPEWFGVAPELLSAGWGS*LERSRG
Trigger: GCCGCGACTCCGCTCCAGGCAGGACCCCCAACCCGC...ACTCAGCAGTTCAGGAGCCACCCCAAACCATTCTGGGACAGGGACACCCCTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GACGTACCAGCACTGCGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCGGTCCCCGCCCAGGCTaGGGGACAGCGAGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: DVPALRVDQPRFTCAKPCGPRPG*GTASQG
Trigger: TCCCTGGCTCGCTGTCCCGCAGCCTGGGCGGGGACC...GCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACGCAGTGCTGGTACGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGCGGTGGCTGAGATTCTaGACCTGGCAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GGHRENKVPAAELASWSVRWLRF*TWQVPS
Trigger: GCTGGGCACCTGCCAGGTGCAGAATCTCAGCCACCG...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCACCACCATCCTTCCCTTaGCCAACCCCGGGGGCTACA +
Preference number: 4 (lower is better)
Translates to: WSRHGTANTQAANATSHAPPSFP*PTPGAT
Trigger: TGTAGCCCCCGGGGTTGGGCAAGGGAAGGATGGTGG...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGCCACCCTTGTCTGGCTaGCAACAAGGGTCTCACCCC +
Preference number: 4 (lower is better)
Translates to: CAPGALALPAPSPREGLLPPLSG*QQGSHP
Trigger: GGGGTGAGACCCTTGTTGGCAGCCAGACAAGGGTGG...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTGTGGTGGGGCGCCTGTaGTGCCTGTGGAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQAVVGRL*CLWSPT
Trigger: GGTGGGGCTCCACAGGCAGCACAGGCGCCCCACCAC...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCGGAGCTGGCCTTGACTaGCTCGCTGTGCGGCCCATC +
Preference number: 4 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFGAGLD*LAVRPI
Trigger: GATGGGCCGCACAGCGAGGCAGTCAAGGCCAGCTCC...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCTGTCCTCATGCCGTGTaGTCTGCTGACACCCTTCAG +
Preference number: 4 (lower is better)
Translates to: EGPHGELEQARNRQHPGRCPHAV*SADTLQ
Trigger: CTGAAGGGTGTCAGCAGAGCACACGGCATGAGGACA...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGCCCGAAAGCAGGTGGTaGCTGGGTCAGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: CAPGALALPAPSPREGLLPESRW*LGQEKV
Trigger: CACCTTCTCCTGACCCAGGCACCACCTGCTTTCGGG...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGATTCTCACTGGAGTGGCTCAATGAGGATCTTGCAGGAGGCCGGCAGGGTGATGTTGGGGGTCCTGCCTaGAGCGGAGTCGCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GFSLEWLNEDLAGGRQGDVGGPA*SGVAAR
Trigger: CCGGGCCGCGACTCCGCTCCAGGCAGGACCCCCAAC...ATCACCCTGCCGGCCTCCTGCAAGATCCTCATTGAGCCACTCCAGTGAGAATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTCGGGGGCCCGAGTGTTaGCGGCCACCATCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQARGPEC*RPPSRR
Trigger: TCTCCGGGATGGTGGCCGCCAACACTCGGGCCCCCG...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGCCACAGGCAGGCACGTaGAAGGGCTGGTTGTGCATG +
Preference number: 4 (lower is better)
Translates to: CAPGALALPAPSPREGLLPQAGT*KGWLCM
Trigger: CATGCACAACCAGCCCTTCCACGTGCCTGCCTGTGG...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTTCCAGGGTTGGCAGCTaGAGCCACAGAGGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPSRVGS*SHRGPF
Trigger: GAAGGGACCTCTGTGGCTCCAGCTGCCAACCCTGGA...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGATGGCCACCTCGGTCTaGGCTCCAGGGTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GGHRENKVPAAELASWSVMATSV*APGLAA
Trigger: AGCTGCCAACCCTGGAGCCCAGACCGAGGTGGCCAT...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCACTGGGTCCCCAAACTaGGTGGTGGTGGGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFTGSPN*VVVGRL
Trigger: CAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGT...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGACTGGGTCCCCAAACTaGGTGGTGGTGGGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGATGSPN*VVVGRL
Trigger: CAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGT...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCAGGAACAGCAGTCGGCTaGGGCAGGAGAGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: WSRHGTANTQAANATSHAGTAVG*GRREGS
Trigger: ACTGCCCTCTCTCCTGCCCCAGCCGACTGCTGTTCC...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GGATTCTCACTGGAGTGGCTCAATGAGGATCTTGCAGGAGGCCGGCAGGGTGATGCAGGCAGAGGAGGCTaGTGCAACCCAGGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GFSLEWLNEDLAGGRQGDAGRGG*CNPGRP
Trigger: CGGCCGCCCTGGGTTGCATCAGCCTCCTCTGCCTGC...ATCACCCTGCCGGCCTCCTGCAAGATCCTCATTGAGCCACTCCAGTGAGAATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGACAGAGGTCCCTTCATaGCCTCTGGAGGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: CAPGALALPAPSPREGLLTEVPS*PLEGHH
Trigger: ATGGTGGCCCTCCAGAGGTCATGAAGGGACCTCTGT...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCTGGCTCCTGAACTGCTaGGTTCCCCTCCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFWLLNC*VPLPGL
Trigger: GAGGCCAGGGAGGGGAACTCAGCAGTTCAGGAGCCA...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGTGGCTCCTGAACTGCTaGGTTCCCCTCCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRWLLNC*VPLPGL
Trigger: GAGGCCAGGGAGGGGAACTCAGCAGTTCAGGAGCCA...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTGGTGTCAGGTGGGTCTaGTTTCGCACCCGAGGCGAC +
Preference number: 4 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVGVRWV*FRTRGD
Trigger: GTCGCCTCGGGTGCGAAATCAGACCCACCTGACACC...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTACTCCTGAACTCAGGTaGTGTGCCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPTPELR*CACLGL
Trigger: GAGGCCAAGGCAGGCACATCACCTGAGTTCAGGAGT...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTCTGCACCTGGCAGGTaGCCAGCACACAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGASAPGR*PAHSPL
Trigger: GAGTGGGCTGTGTGCTGGGCACCTGCCAGGTGCAGA...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCAGCGCTTAGCATCTGGTaGTGCCGCCAGCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: AGLDCLAVRPITLTTFAAALSIW*CRQLCL
Trigger: CAGACACAGCTGGCGGCAGCACCAGATGCTAAGCGC...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCACCACCCTTGTCTGGCTaGCAACAAGGGTCTCACCCC +
Preference number: 4 (lower is better)
Translates to: AGLDCLAVRPITLTTFAAPPLSG*QQGSHP
Trigger: GGGGTGAGACCCTTGTTGGCAGCCAGACAAGGGTGG...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTCTGAACCCCGTGTTCTaGTGGACGGTTGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPLNPVF*WTVERL
Trigger: GAGCCTCTCAACCGTCCAGCAGAACACGGGGTTCAG...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGCTCCTTCACTCCCCGTaGCCCTCCCTCTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GGHRENKVPAAELASWSVLLHSP*PSLCPH
Trigger: ATGAGGACAGAGGGAGGGGCACGGGGAGTGAAGGAG...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTAGGCCCCAGACGGGGTaGCAAGCTGGACTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVRPQTG*QAGLCP
Trigger: TGGGCAAAGTCCAGCTTGGCACCCCGTCTGGGGCCT...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGCCCGAAAGCAGGTGGTaGCTGGGTCAGGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GGHRENKVPAAELASWSVPESRW*LGQEKV
Trigger: CACCTTCTCCTGACCCAGGCACCACCTGCTTTCGGG...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGGTCACGTGCTCAGCATaGACTGGCCAGAGGGATGCA +
Preference number: 4 (lower is better)
Translates to: CAPGALALPAPSPREGLLVTCSA*TGQRDA
Trigger: TGCATCCCTCTGGCCAGTGCATGCTGAGCACGTGAC...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCAACCGTGAGAACAAAGTaGCCGCGGCAGAGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: AGLDCLAVRPITLTTFAATVRTK*PRQSWR
Trigger: ACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGT...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GACGTACCAGCACTGCGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCGGGGGCACAGCACCCTaGCTGGGATGGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: DVPALRVDQPRFTCAKPCGGTAP*LGWAGV
Trigger: CACCCCTGCCCATCCCAGCCAGGGTGCTGTGCCCCC...GCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACGCAGTGCTGGTACGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCTGCTCGTCCAGACATaGCCCCGTGTGTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRLLVQT*PRVFRA
Trigger: GGCCCTGAACACACGGGGCCATGTCTGGACGAGCAG...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCATCCAGGGTTGGCAGCTaGAGCCACAGAGGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: AGLDCLAVRPITLTTFAASRVGS*SHRGPF
Trigger: GAAGGGACCTCTGTGGCTCCAGCTGCCAACCCTGGA...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGAGCCCTGCCCTGCCCTaGGGTAGAAAGGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQSPALP*GRKGCP
Trigger: GGGACACCCCTTTCTACCCCAGGGCAGGGCAGGGCT...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp CCTCGTGGAGTACAGGTCAGTTACGTGGACTCGGCAATCCCTGAGCTCGGGGAGCGCCTGTGCTGCCTGTaGAGCCCCACCCTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: PRGVQVSYVDSAIPELGERLCCL*SPTLVW
Trigger: CCAGACAAGGGTGGGGCTCCACAGGCAGCACAGGCG...CTCCCCGAGCTCAGGGATTGCCGAGTCCACGTAACTGACCTGTACTCCACGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCCAAACTGGGTGGTGGTaGGGCGCCTGTGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFQTGWW*GACAAC
Trigger: ACAGGCAGCACAGGCGCCCCACCACCACCCAGTTTG...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGGTTCTTGCTGTCACTTaGGCCTGGGCTGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: GGHRENKVPAAELASWSVVLAVT*AWAALP
Trigger: AGGGAGGGCAGCCCAGGCCCAAGTGACAGCAAGAAC...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTAACCCCGTGTTCTGCTaGACGGTTGAGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPNPVFC*TVERLQ
Trigger: CTGGAGCCTCTCAACCGTCCAGCAGAACACGGGGTT...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCGCCCCGAAAGCAGGTaGTGCCTGGGTCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRRPESR*CLGQEK
Trigger: CTTCTCCTGACCCAGGCACCACCTGCTTTCGGGGCG...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCAATGCAGACAGGTGCCTaGGAGGAGGCTACGGCCATC +
Preference number: 4 (lower is better)
Translates to: WSRHGTANTQAANATSHAMQTGA*EEATAI
Trigger: GATGGCCGTAGCCTCCTCCCAGGCACCTGTCTGCAT...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GACGTACCAGCACTGCGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCCGGGCCCAGCGAGGATaGGGATGGGGTCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: DVPALRVDQPRFTCAKPCRAQRG*GWGQAS
Trigger: CGAGGCCTGACCCCATCCCCATCCTCGCTGGGCCCG...GCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACGCAGTGCTGGTACGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp AATGTCCTGAGCTCTGCTGCGGCCTCTAGAGTTGGGGTGATCATGGCGACCCTCGCCACAGGCGGTGGCTaGGATTCTGCACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: NVLSSAAASRVGVIMATLATGGG*DSAPGR
Trigger: CCTGCCAGGTGCAGAATCTCAGCCACCGCCTGTGGC...GAGGGTCGCCATGATCACCCCAACTCTAGAGGCCGCAGCAGAGCTCAGGACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGAGGGCTGGTTGTGCATaGGAGCAGGAACAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRRAGCA*EQEQPR
Trigger: CCTGGGCTGTTCCTGCTCTCATGCACAACCAGCCCT...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCTTGGAGGTAGGAACTaGGGGGCAAGCTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVLGGRN*GASSVG
Trigger: CCCCACAGAGCTTGCCCCTCAGTTCCTACCTCCAAG...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGTGCGGCCCATCACCCTaGCCACCTTTGCTGCAATCC +
Preference number: 4 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRCGPSP*PPLLQS
Trigger: GGATTGCAGCAAAGGTGGTCAGGGTGATGGGCCGCA...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGGGGTTTTGGCTGGGCTaGGTAGCGGACGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQGFWLG*VADAEL
Trigger: GAGCTCAGCGTCCGCTACTCAGCCCAGCCAAAACCC...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTCTGGCACAGCTGAGCTaGGAAGCAACTGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPLAQLS*EATVRR
Trigger: TCTCCTCACAGTTGCTTCTCAGCTCAGCTGTGCCAG...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTGTGGGCAGCTGACCTaGCTCAACAAGATCCTGGCA +
Preference number: 4 (lower is better)
Translates to: CAPGALALPAPSPREGLLCGQLT*LNKILA
Trigger: TGCCAGGATCTTGTTGAGTCAGGTCAGCTGCCCACA...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGACCACAGCTGGAGATTaGTGGCGTTGGAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GGHRENKVPAAELASWSVTTAGD*WRWRGQ
Trigger: CTGACCCCTCCAACGCCATCAATCTCCAGCTGTGGT...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGTTGCTGCAGGACCTaGTGTCTGCAGCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGACCCRT*CLQLRG
Trigger: CCCTCGGAGCTGCAGACAGCAGGTCCTGCAGCAACA...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGCCGTGCAGGTATTGTTaGTGCAGGACCTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: CAPGALALPAPSPREGLLPCRYC*CRTCCL
Trigger: CAGACAGCAGGTCCTGCAGCAACAATACCTGCACGG...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCACTTAGCATCTGGTGCTaGCGCCAGCTGTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: AGLDCLAVRPITLTTFAALSIWC*RQLCLA
Trigger: TGCCAGACACAGCTGGCGGCAGCACCAGATGCTAAG...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGGCGCTTAGCATCTGGTaGTGCCGCCAGCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGAALSIW*CRQLCL
Trigger: CAGACACAGCTGGCGGCAGCACCAGATGCTAAGCGC...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGTCAGGGCCCAGCTTCTaGTCCACATCTCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GGHRENKVPAAELASWSVSGPSF*STSLGR
Trigger: TCTGCCCAGAGATGTGGAGCAGAAGCTGGGCCCTGA...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGTCAGCCTCTCTCCCCTaGTCGTCCAGACATGGCCCC +
Preference number: 4 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQSASLP*SSRHGP
Trigger: GGGGCCATGTCTGGACGAGCAGGGGAGAGAGGCTGA...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp AGCAAGCACAGGGGCGGCGCCTGGGTGGGCGCTTCCAGGACCCTCCCCCTTGGACACCCTGACCACCTTTaGTGCAATCCTAGTACATCT +
Preference number: 4 (lower is better)
Translates to: SKHRGGAWVGASRTLPLGHPDHL*CNPSTS
Trigger: AGATGTACTAGGATTGCAGCAAAGGTGGTCAGGGTG...TCCAAGGGGGAGGGTCCTGGAAGCGCCCACCCAGGCGCCGCCCCTGTGCTTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTCAGCCACGCCTCCTGTaGACCTGGGGCCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: GDHGDPRGMAERVTLANIQPRLL*TWGLGT
Trigger: AGTGCCAAGGCCCCAGGTGCACAGGAGGCGTGGCTG...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp AATGTCCTGAGCTCTGCTGCGGCCTCTAGAGTTGGGGTGATCATGGCGACCCTCGCAGCTGGAAGTGGGTaGAGGTGCTGCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: NVLSSAAASRVGVIMATLAAGSG*RCCWAS
Trigger: GGAGGCCCAGCAGCACCTGCACCCACTTCCAGCTGC...GAGGGTCGCCATGATCACCCCAACTCTAGAGGCCGCAGCAGAGCTCAGGACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGCCCATGCATGGGCCCTaGAGGCATGGAGGACACCGT +
Preference number: 4 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQPMHGP*RHGGHR
Trigger: ACGGTGTCCTCCATGCCTGCAGGGCCCATGCATGGG...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp CCTCGTGGAGTACAGGTCAGTTACGTGGACTCGGCAATCCCTGAGCTCGGGGAGCCCATGCATGGGCCCTaGAGGCATGGAGGACACCGT +
Preference number: 4 (lower is better)
Translates to: PRGVQVSYVDSAIPELGEPMHGP*RHGGHR
Trigger: ACGGTGTCCTCCATGCCTGCAGGGCCCATGCATGGG...CTCCCCGAGCTCAGGGATTGCCGAGTCCACGTAACTGACCTGTACTCCACGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp AATGTCCTGAGCTCTGCTGCGGCCTCTAGAGTTGGGGTGATCATGGCGACCCTCGCTCAGCTGCAGCTCTaGACGGGGGCACAGCACCCT +
Preference number: 4 (lower is better)
Translates to: NVLSSAAASRVGVIMATLAQLQL*TGAQHP
Trigger: AGGGTGCTGTGCCCCCGTCCAGAGCTGCAGCTGAGC...GAGGGTCGCCATGATCACCCCAACTCTAGAGGCCGCAGCAGAGCTCAGGACATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGGAAGCGCTTAGCATCTaGTGCTGCCGCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GGHRENKVPAAELASWSVEALSI*CCRQLC
Trigger: ACACAGCTGGCGGCAGCACCAGATGCTAAGCGCTTC...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCAGGCACGTGGAAGGGCTaGTTGTGCATGAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AGLDCLAVRPITLTTFAAGTWKG*LCMRAG
Trigger: TCCTGCTCTCATGCACAACCAGCCCTTCCACGTGCC...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGGGCACGTGGAAGGGCTaGTTGTGCATGAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GGHRENKVPAAELASWSVGTWKG*LCMRAG
Trigger: TCCTGCTCTCATGCACAACCAGCCCTTCCACGTGCC...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCAAGCCCCACCCTTGTCTaGCTGCCAACAAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: AGLDCLAVRPITLTTFAASPTLV*LPTRVS
Trigger: TGAGACCCTTGTTGGCAGCCAGACAAGGGTGGGGCT...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTGGTCCCCAAACTGGGTaGTGGTGGGGCGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GDHGDPRGMAERVTLANIGPQTG*WWGACA
Trigger: AGCACAGGCGCCCCACCACCACCCAGTTTGGGGACC...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTAGGGCAGGACCAGCCTaGACCGTTCCCACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQARAGPA*TVPTGP
Trigger: AGGCCCTGTGGGAACGGTCCAGGCTGGTCCTGCCCT...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGTGCAGCAGCGCCATCTaGGCTCACTGCAACCTCCAC +
Preference number: 4 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRCSSAI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCCAGATGGCGCTGCTGCA...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp CCTCGTGGAGTACAGGTCAGTTACGTGGACTCGGCAATCCCTGAGCTCGGGGAGGTGGCCAGGGAAGTCTaGGAACAGCAGTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PRGVQVSYVDSAIPELGEVAREV*EQQSAG
Trigger: CCCAGCCGACTGCTGTTCCCAGACTTCCCTGGCCAC...CTCCCCGAGCTCAGGGATTGCCGAGTCCACGTAACTGACCTGTACTCCACGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGGCAACTTCCCATGCATaGGCCCTGCAGGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRATSHA*ALQAWR
Trigger: CCTCCATGCCTGCAGGGCCCATGCATGGGAAGTTGC...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTGGCCTCACGGAGAGTTaGAGCAGGCACGGAACCGCC +
Preference number: 4 (lower is better)
Translates to: GDHGDPRGMAERVTLANIGLTES*SRHGTA
Trigger: GGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCC...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGGAGTGTGTCAGGCTCTaGGAGAGGGGCCTCACGGAG +
Preference number: 4 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQECVRL*ERGLTE
Trigger: CTCCGTGAGGCCCCTCTCCCAGAGCCTGACACACTC...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GAAAGGGGTGTCCCTGTCCCAGAATGGTTTGGGGTGGCTCCTGAACTGCTGAGTCCATCCCGGAGAGGCTaGCCCATAACAGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ERGVPVPEWFGVAPELLSPSRRG*PITGAR
Trigger: CCTGGCCCCTGTTATGGGTCAGCCTCTCCGGGATGG...ACTCAGCAGTTCAGGAGCCACCCCAAACCATTCTGGGACAGGGACACCCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGACAGAGGTCCCTTCATaGCCTCTGGAGGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRTEVPS*PLEGHH
Trigger: ATGGTGGCCCTCCAGAGGTCATGAAGGGACCTCTGT...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp CCTCGTGGAGTACAGGTCAGTTACGTGGACTCGGCAATCCCTGAGCTCGGGGAGCCTCTAGAGTTGGGGTaGTCATGGCGACCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: PRGVQVSYVDSAIPELGEPLELG*SWRPSW
Trigger: CCACGAGGGTCGCCATGATCACCCCAACTCTAGAGG...CTCCCCGAGCTCAGGGATTGCCGAGTCCACGTAACTGACCTGTACTCCACGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGCTTGGAGGTAGGAACTaGGGGGCAAGCTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQLGGRN*GASSVG
Trigger: CCCCACAGAGCTTGCCCCTCAGTTCCTACCTCCAAG...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTGGACTCGGCAATCCCTaGGCTCGGGGAGCAAGCACA +
Preference number: 4 (lower is better)
Translates to: GDHGDPRGMAERVTLANIGLGNP*ARGAST
Trigger: TGTGCTTGCTCCCCGAGCTCAGGGATTGCCGAGTCC...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGCCGTGTGCTCTGCTaGCACCCTTCAGTGGTCACA +
Preference number: 4 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGACRVLC*HPSVVT
Trigger: TGTGACCACTGAAGGGTGTCAGCAGAGCACACGGCA...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp AATGTCCTGAGCTCTGCTGCGGCCTCTAGAGTTGGGGTGATCATGGCGACCCTCGGGTTTTGGCTGGGCTaGGTAGCGGACGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: NVLSSAAASRVGVIMATLGFWLG*VADAEL
Trigger: GAGCTCAGCGTCCGCTACTCAGCCCAGCCAAAACCC...GAGGGTCGCCATGATCACCCCAACTCTAGAGGCCGCAGCAGAGCTCAGGACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCATGTGGGCAGCTGACCTaGCTCAACAAGATCCTGGCA +
Preference number: 4 (lower is better)
Translates to: WSRHGTANTQAANATSHACGQLT*LNKILA
Trigger: TGCCAGGATCTTGTTGAGTCAGGTCAGCTGCCCACA...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGACCACAGCTGGAGATTaGTGGCGTTGGAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGATTAGD*WRWRGQ
Trigger: CTGACCCCTCCAACGCCATCAATCTCCAGCTGTGGT...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTATTCAAGAGAGTGGTaGGAGGAGCTCACCTCCGAG +
Preference number: 4 (lower is better)
Translates to: CAPGALALPAPSPREGLLYSREW*EELTSE
Trigger: CTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATA...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTCATAGCTGTGGGGGCTaGTGGGGTCCACAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQAHSCGG*WGPQEL
Trigger: CAGCTCCTGTGGACCCCAGCAGCCCCCACAGCTATG...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGCTTAGCATCTGGTGCTaGCGCCAGCTGTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGALSIWC*RQLCLA
Trigger: TGCCAGACACAGCTGGCGGCAGCACCAGATGCTAAG...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTTCAGCCTCTCTCCCCTaGTCGTCCAGACATGGCCCC +
Preference number: 4 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQASASLP*SSRHGP
Trigger: GGGGCCATGTCTGGACGAGCAGGGGAGAGAGGCTGA...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCATGGAAGGGCTGGTTGTaGATGAGAGCAGGAACAGCC +
Preference number: 4 (lower is better)
Translates to: AGLDCLAVRPITLTTFAAWKGWL*MRAGTA
Trigger: GGCTGTTCCTGCTCTCATGCACAACCAGCCCTTCCA...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGAGTGGTTCTTGTTCTTaGTGTCACTTGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CAPGALALPAPSPREGLLSGSCS*CHLGLG
Trigger: GCCCAGGCCCAAGTGACAGCAAGAACAAGAACCACT...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCACCCTGACCACCTTTaGTGCAATCCTAGTACATCT +
Preference number: 4 (lower is better)
Translates to: EGPHGELEQARNRQHPGRHPDHL*CNPSTS
Trigger: AGATGTACTAGGATTGCAGCAAAGGTGGTCAGGGTG...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGTGTCCTCATGCCGTGTaGTCTGCTGACACCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GGHRENKVPAAELASWSVCPHAV*SADTLQ
Trigger: CTGAAGGGTGTCAGCAGAGCACACGGCATGAGGACA...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTCACTGGCCAGAGGGATaGAGACAGGTGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQAHWPEG*RQVPGR
Trigger: CCTCCCAGGCACCTGTCTGCATCCCTCTGGCCAGTG...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCAACGCAACTTCCCATaGATGGGCCCTGCAGGCATG +
Preference number: 4 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRQRNFP*MGPAGM
Trigger: CATGCCTGCAGGGCCCATGCATGGGAAGTTGCGTTG...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTGCAGCTCCGAGGGACTaGGCTTCAGATGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQAAAPRD*ASDGAQ
Trigger: CTGAGCCCCATCTGAAGCCCAGTCCCTCGGAGCTGC...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTGCAGCTCCGAGGGACTaGGCTTCAGATGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GDHGDPRGMAERVTLANIAAPRD*ASDGAQ
Trigger: CTGAGCCCCATCTGAAGCCCAGTCCCTCGGAGCTGC...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTCGGAGGGGCCACTTCTaGCCAGTTCAGCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GDHGDPRGMAERVTLANIRRGHF*PVQPLS
Trigger: GGAGAGAGGCTGAACTGGCCAGAAGTGGCCCCTCCG...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCAGTCCCTGTCCCAGAATaGTTTGGGGTGGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: AGLDCLAVRPITLTTFAAVPVPE*FGVAPE
Trigger: TTCAGGAGCCACCCCAAACCATTCTGGGACAGGGAC...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GACGTACCAGCACTGCGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCCGCCTGTGCTGCCTGTaGAGCCCCACCCTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: DVPALRVDQPRFTCAKPCRLCCL*SPTLVW
Trigger: CCAGACAAGGGTGGGGCTCCACAGGCAGCACAGGCG...GCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACGCAGTGCTGGTACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTCGCACCTGGTCCCACTaGGTCCCCAAACTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQARTWSH*VPKLGG
Trigger: ACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGCG...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTTGTGCACGCCGGCAGTaGTTCTTGTTCTTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPCARRQ*FLFLLS
Trigger: TGACAGCAAGAACAAGAACCACTGCCGGCGTGCACA...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCGTTGAGAGGCTCCAGTaGCAGGCACATGTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFVERLQ*QAHVSP
Trigger: GGGACTCACATGTGCCTGCCACTGGAGCCTCTCAAC...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCATCCCACAGGGCCTCGTaGAGTACAGGTCAGTTACGT +
Preference number: 4 (lower is better)
Translates to: WSRHGTANTQAANATSHASHRAS*STGQLR
Trigger: ACGTAACTGACCTGTACTCCACGAGGCCCTGTGGGA...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGTCCCACAGGGCCTCGTaGAGTACAGGTCAGTTACGT +
Preference number: 4 (lower is better)
Translates to: GGHRENKVPAAELASWSVSHRAS*STGQLR
Trigger: ACGTAACTGACCTGTACTCCACGAGGCCCTGTGGGA...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCAGAAGGAGCCCTTTCTaGACCCCGTGTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFRRSPF*TPCSAG
Trigger: TCCAGCAGAACACGGGGTTCAGAAAGGGCTCCTTCT...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTTGTGGGGGAATGTCCTaGGCTCTGCTGCGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: GDHGDPRGMAERVTLANICGGMS*ALLRPL
Trigger: TAGAGGCCGCAGCAGAGCTCAGGACATTCCCCCACA...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTTCCTCAGACCTCACCTaGCCCAGTGCTTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQASSDLT*PSASPR
Trigger: CCTGGGAGAAGCACTGGGTCAGGTGAGGTCTGAGGA...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GAAAGGGGTGTCCCTGTCCCAGAATGGTTTGGGGTGGCTCCTGAACTGCTGAGTGCATGGAGGACACCGTaGGAACAAAGTGCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: ERGVPVPEWFGVAPELLSAWRTP*EQSARG
Trigger: GCCGCGGGCACTTTGTTCTCACGGTGTCCTCCATGC...ACTCAGCAGTTCAGGAGCCACCCCAAACCATTCTGGGACAGGGACACCCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCATATTCAAGAGAGTGGTaGGAGGAGCTCACCTCCGAG +
Preference number: 4 (lower is better)
Translates to: AGLDCLAVRPITLTTFAAYSREW*EELTSE
Trigger: CTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATA...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGATTCTCACTGGAGTGGCTCAATGAGGATCTTGCAGGAGGCCGGCAGGGTGATTCTGCACCTGGCAGGTaGCCAGCACACAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: GFSLEWLNEDLAGGRQGDSAPGR*PAHSPL
Trigger: GAGTGGGCTGTGTGCTGGGCACCTGCCAGGTGCAGA...ATCACCCTGCCGGCCTCCTGCAAGATCCTCATTGAGCCACTCCAGTGAGAATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GACGTACCAGCACTGCGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCCATAGCTGTGGGGGCTaGTGGGGTCCACAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: DVPALRVDQPRFTCAKPCHSCGG*WGPQEL
Trigger: CAGCTCCTGTGGACCCCAGCAGCCCCCACAGCTATG...GCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACGCAGTGCTGGTACGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp AATGTCCTGAGCTCTGCTGCGGCCTCTAGAGTTGGGGTGATCATGGCGACCCTCTGTTGCTGCAGGACCTaGTGTCTGCAGCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: NVLSSAAASRVGVIMATLCCCRT*CLQLRG
Trigger: CCCTCGGAGCTGCAGACAGCAGGTCCTGCAGCAACA...GAGGGTCGCCATGATCACCCCAACTCTAGAGGCCGCAGCAGAGCTCAGGACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCATGCAGGTATTGTTGCTaGAGGACCTGCTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: WSRHGTANTQAANATSHACRYCC*RTCCLQ
Trigger: CTGCAGACAGCAGGTCCTGCAGCAACAATACCTGCA...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGCCGTGCAGGTATTGTTaGTGCAGGACCTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGAPCRYC*CRTCCL
Trigger: CAGACAGCAGGTCCTGCAGCAACAATACCTGCACGG...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GAAAGGGGTGTCCCTGTCCCAGAATGGTTTGGGGTGGCTCCTGAACTGCTGAGTCCACCATCCTTCCCTTaGCCAACCCCGGGGGCTACA +
Preference number: 4 (lower is better)
Translates to: ERGVPVPEWFGVAPELLSPPSFP*PTPGAT
Trigger: TGTAGCCCCCGGGGTTGGGCAAGGGAAGGATGGTGG...ACTCAGCAGTTCAGGAGCCACCCCAAACCATTCTGGGACAGGGACACCCCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp TGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCCAACGCAACTTCCCATGCAAGTGGTTCTTGTTCTTaGTGTCACTTGGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: WSRHGTANTQAANATSHASGSCS*CHLGLG
Trigger: GCCCAGGCCCAAGTGACAGCAAGAACAAGAACCACT...TGCATGGGAAGTTGCGTTGGCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGATTCTCACTGGAGTGGCTCAATGAGGATCTTGCAGGAGGCCGGCAGGGTGATAGGCCCCAGACGGGGTaGCAAGCTGGACTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GFSLEWLNEDLAGGRQGDRPQTG*QAGLCP
Trigger: TGGGCAAAGTCCAGCTTGGCACCCCGTCTGGGGCCT...ATCACCCTGCCGGCCTCCTGCAAGATCCTCATTGAGCCACTCCAGTGAGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GACGTACCAGCACTGCGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCCACTGGCCAGAGGGATaGAGACAGGTGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: DVPALRVDQPRFTCAKPCHWPEG*RQVPGR
Trigger: CCTCCCAGGCACCTGTCTGCATCCCTCTGGCCAGTG...GCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACGCAGTGCTGGTACGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGAGTTGCCACAGGCGGTaGCTGAGATTCTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQSCHRR*LRFCTW
Trigger: CCAGGTGCAGAATCTCAGCCACCGCCTGTGGCAACT...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGGAAGCGCTTAGCATCTaGTGCTGCCGCCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQEALSI*CCRQLC
Trigger: ACACAGCTGGCGGCAGCACCAGATGCTAAGCGCTTC...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGATTCTCACTGGAGTGGCTCAATGAGGATCTTGCAGGAGGCCGGCAGGGTGATCTGCTCGTCCAGACATaGCCCCGTGTGTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GFSLEWLNEDLAGGRQGDLLVQT*PRVFRA
Trigger: GGCCCTGAACACACGGGGCCATGTCTGGACGAGCAG...ATCACCCTGCCGGCCTCCTGCAAGATCCTCATTGAGCCACTCCAGTGAGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTCTGAGTTCCCCTCCCTaGCCTCCTACAGGGGATCCA +
Preference number: 4 (lower is better)
Translates to: GDHGDPRGMAERVTLANILSSPP*PPTGDP
Trigger: TGGATCCCCTGTAGGAGGCCAGGGAGGGGAACTCAG...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GACGTACCAGCACTGCGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCCAAACTGGGTGGTGGTaGGGCGCCTGTGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: DVPALRVDQPRFTCAKPCQTGWW*GACAAC
Trigger: ACAGGCAGCACAGGCGCCCCACCACCACCCAGTTTG...GCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACGCAGTGCTGGTACGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp AATGTCCTGAGCTCTGCTGCGGCCTCTAGAGTTGGGGTGATCATGGCGACCCTCGTTCTTGCTGTCACTTaGGCCTGGGCTGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: NVLSSAAASRVGVIMATLVLAVT*AWAALP
Trigger: AGGGAGGGCAGCCCAGGCCCAAGTGACAGCAAGAAC...GAGGGTCGCCATGATCACCCCAACTCTAGAGGCCGCAGCAGAGCTCAGGACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGAACCCCGTGTTCTGCTaGACGGTTGAGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQNPVFC*TVERLQ
Trigger: CTGGAGCCTCTCAACCGTCCAGCAGAACACGGGGTT...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GACGTACCAGCACTGCGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCGACGGGGTGCCAAGCTaGACTTTGCCCAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: DVPALRVDQPRFTCAKPCDGVPS*TLPRQE
Trigger: CTCCTGCCTGGGCAAAGTCCAGCTTGGCACCCCGTC...GCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACGCAGTGCTGGTACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTGTGATGTGCCTGCCTTaGCCTCCCAATGTGCTAGGA +
Preference number: 4 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVVMCLP*PPNVLG
Trigger: TCCTAGCACATTGGGAGGCCAAGGCAGGCACATCAC...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGTCAGGAGAAGGTGTCTaGATAGGTTCAGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GGHRENKVPAAELASWSVSGEGV*IGSGGG
Trigger: CCCACCTCCTGAACCTATCCAGACACCTTCTCCTGA...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GACGTACCAGCACTGCGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCCGCCCCGAAAGCAGGTaGTGCCTGGGTCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: DVPALRVDQPRFTCAKPCRPESR*CLGQEK
Trigger: CTTCTCCTGACCCAGGCACCACCTGCTTTCGGGGCG...GCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACGCAGTGCTGGTACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp AATGTCCTGAGCTCTGCTGCGGCCTCTAGAGTTGGGGTGATCATGGCGACCCTCATGCAGACAGGTGCCTaGGAGGAGGCTACGGCCATC +
Preference number: 4 (lower is better)
Translates to: NVLSSAAASRVGVIMATLMQTGA*EEATAI
Trigger: GATGGCCGTAGCCTCCTCCCAGGCACCTGTCTGCAT...GAGGGTCGCCATGATCACCCCAACTCTAGAGGCCGCAGCAGAGCTCAGGACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTTTGTCTGACTTCCTGTaGCACTCAGCACTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVLSDFL*HSALPA
Trigger: GGCAGGGAGTGCTGAGTGCCACAGGAAGTCAGACAA...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTTGGCGTCTTGGAGCGTaGCCAGGGAAGTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: GDHGDPRGMAERVTLANIWRLGA*PGKSGN
Trigger: GTTCCCAGACTTCCCTGGCCACGCTCCAAGACGCCA...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGAGAAGGAGCCCTTTCTaGACCCCGTGTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQRRSPF*TPCSAG
Trigger: TCCAGCAGAACACGGGGTTCAGAAAGGGCTCCTTCT...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GAAAGGGGTGTCCCTGTCCCAGAATGGTTTGGGGTGGCTCCTGAACTGCTGAGTTCCTCAGACCTCACCTaGCCCAGTGCTTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: ERGVPVPEWFGVAPELLSSSDLT*PSASPR
Trigger: CCTGGGAGAAGCACTGGGTCAGGTGAGGTCTGAGGA...ACTCAGCAGTTCAGGAGCCACCCCAAACCATTCTGGGACAGGGACACCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGCTCTCCTTCCTTGTCTaGCTTCCTGTGGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQLSFLV*LPVALS
Trigger: GCTGAGTGCCACAGGAAGTCAGACAAGGAAGGAGAG...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTAGGGCTGTGGGCAGCTaGCCTGACTCAACAAGATCC +
Preference number: 4 (lower is better)
Translates to: GDHGDPRGMAERVTLANIRAVGS*PDSTRS
Trigger: GGATCTTGTTGAGTCAGGTCAGCTGCCCACAGCCCT...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCATACCTAGGGCTGTaGAGATCAGAGTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRPYLGL*RSEFWA
Trigger: AGCCCAGAACTCTGATCTTCACAGCCCTAGGTATGG...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGCACACACCAAGTCTGTaGACGCCGGCAGTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQHTPSL*TPAVVL
Trigger: AAGAACCACTGCCGGCGTGCACAGACTTGGTGTGTG...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGCCTGACCACCTTTGCTaGAATCCTAGTACATCTCTC +
Preference number: 4 (lower is better)
Translates to: CAPGALALPAPSPREGLLPDHLC*NPSTSL
Trigger: GAGAGATGTACTAGGATTGCAGCAAAGGTGGTCAGG...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTGCACTCAGCACTCCCTaGCACTCCACCACCCACTTA +
Preference number: 4 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQAALSTP*HSTTHL
Trigger: TAAGTGGGTGGTGGAGTGGCAGGGAGTGCTGAGTGC...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GACGTACCAGCACTGCGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCACCGTGAGAACAAAGTaGCCGCGGCAGAGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: DVPALRVDQPRFTCAKPCTVRTK*PRQSWR
Trigger: ACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGT...GCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACGCAGTGCTGGTACGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTCGCAGGAGCTGGGCTTaGGTCCTGCGGGGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: FIQESGERSSPPSSTTTARRSWA*VLRGPE
Trigger: CTCGGGCCCCCGCAGGACCCAAGCCCAGCTCCTGCG...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp AATGTCCTGAGCTCTGCTGCGGCCTCTAGAGTTGGGGTGATCATGGCGACCCTCTCCCTTCATGACCTCTaGAGGGCCACCATCCTTCCC +
Preference number: 4 (lower is better)
Translates to: NVLSSAAASRVGVIMATLSLHDL*RATILP
Trigger: GGGAAGGATGGTGGCCCTCCAGAGGTCATGAAGGGA...GAGGGTCGCCATGATCACCCCAACTCTAGAGGCCGCAGCAGAGCTCAGGACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGTGTGCACGCCGGCAGTaGTTCTTGTTCTTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRCARRQ*FLFLLS
Trigger: TGACAGCAAGAACAAGAACCACTGCCGGCGTGCACA...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp ATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGTACAGGTCAGTTACGTaGACTCGGCAATCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: MGSGLVEERTQGHLPRVRYRSVT*TRQSLS
Trigger: GCTCAGGGATTGCCGAGTCCACGTAACTGACCTGTA...CCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp CCTCGTGGAGTACAGGTCAGTTACGTGGACTCGGCAATCCCTGAGCTCGGGGAGGATAGGTTCAGGAGGTaGGACCGGGTGGGATTCAGA +
Preference number: 4 (lower is better)
Translates to: PRGVQVSYVDSAIPELGEDRFRR*DRVGFR
Trigger: TCTGAATCCCACCCGGTCCCACCTCCTGAACCTATC...CTCCCCGAGCTCAGGGATTGCCGAGTCCACGTAACTGACCTGTACTCCACGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCTCAGGAGAAGGTGTCTaGATAGGTTCAGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFSGEGV*IGSGGG
Trigger: CCCACCTCCTGAACCTATCCAGACACCTTCTCCTGA...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GAAAGGGGTGTCCCTGTCCCAGAATGGTTTGGGGTGGCTCCTGAACTGCTGAGTGCAACTTCCCATGCATaGGCCCTGCAGGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: ERGVPVPEWFGVAPELLSATSHA*ALQAWR
Trigger: CCTCCATGCCTGCAGGGCCCATGCATGGGAAGTTGC...ACTCAGCAGTTCAGGAGCCACCCCAAACCATTCTGGGACAGGGACACCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTCTCTCCTTCCTTGTCTaGCTTCCTGTGGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQALSFLV*LPVALS
Trigger: GCTGAGTGCCACAGGAAGTCAGACAAGGAAGGAGAG...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GACGTACCAGCACTGCGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCAGGGCTGTGGGCAGCTaGCCTGACTCAACAAGATCC +
Preference number: 4 (lower is better)
Translates to: DVPALRVDQPRFTCAKPCRAVGS*PDSTRS
Trigger: GGATCTTGTTGAGTCAGGTCAGCTGCCCACAGCCCT...GCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACGCAGTGCTGGTACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGATCAAGGGTGGGAGATaGGGAATGGGATCAGATATC +
Preference number: 4 (lower is better)
Translates to: GGHRENKVPAAELASWSVIKGGR*GMGSDI
Trigger: GATATCTGATCCCATTCCTCATCTCCCACCCTTGAT...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGTGCAGGTATTGTTGCTaGAGGACCTGCTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQCRYCC*RTCCLQ
Trigger: CTGCAGACAGCAGGTCCTGCAGCAACAATACCTGCA...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTCTGACCCCCGAGCCTTaGCCCAGGGCCCCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: FIQESGERSSPPSSTTTALTPEP*PRAPSF
Trigger: GAAGGAGGGGGCCCTGGGGCAAGGCTCGGGGGTCAG...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTCCCACTCGCAGGAGCTaGGCTTGGGTCCTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: FIQESGERSSPPSSTTTAPTRRS*AWVLRG
Trigger: CCCCCGCAGGACCCAAGCCCAGCTCCTGCGAGTGGG...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GAAAGGGGTGTCCCTGTCCCAGAATGGTTTGGGGTGGCTCCTGAACTGCTGAGTAGCCCCACCCTTGTCTaGCTGCCAACAAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: ERGVPVPEWFGVAPELLSSPTLV*LPTRVS
Trigger: TGAGACCCTTGTTGGCAGCCAGACAAGGGTGGGGCT...ACTCAGCAGTTCAGGAGCCACCCCAAACCATTCTGGGACAGGGACACCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GACGTACCAGCACTGCGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCGTTGAGAGGCTCCAGTaGCAGGCACATGTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: DVPALRVDQPRFTCAKPCVERLQ*QAHVSP
Trigger: GGGACTCACATGTGCCTGCCACTGGAGCCTCTCAAC...GCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACGCAGTGCTGGTACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GACGTACCAGCACTGCGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCAGGAGAGGAGACGTCTaGGAGGGTTTTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: DVPALRVDQPRFTCAKPCRRGDV*EGFGWA
Trigger: AGCCCAGCCAAAACCCTCCCAGACGTCTCCTCTCCT...GCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACGCAGTGCTGGTACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GAAAGGGGTGTCCCTGTCCCAGAATGGTTTGGGGTGGCTCCTGAACTGCTGAGTGTGCTCAGCATGCACTaGCCAGAGGGATGCAGACAG +
Preference number: 4 (lower is better)
Translates to: ERGVPVPEWFGVAPELLSVLSMH*PEGCRQ
Trigger: CTGTCTGCATCCCTCTGGCCAGTGCATGCTGAGCAC...ACTCAGCAGTTCAGGAGCCACCCCAAACCATTCTGGGACAGGGACACCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTTTGTCTGACTTCCTGTaGCACTCAGCACTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQALSDFL*HSALPA
Trigger: GGCAGGGAGTGCTGAGTGCCACAGGAAGTCAGACAA...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTATCAAGGGTGGGAGATaGGGAATGGGATCAGATATC +
Preference number: 4 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVIKGGR*GMGSDI
Trigger: GATATCTGATCCCATTCCTCATCTCCCACCCTTGAT...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTACGTGTGCAAAGCCGTaGAGGTATTGTTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQATCAKP*RYCCCR
Trigger: CCTGCAGCAACAATACCTGCACGGCTTTGCACACGT...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTACGTGTGCAAAGCCGTaGAGGTATTGTTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GDHGDPRGMAERVTLANITCAKP*RYCCCR
Trigger: CCTGCAGCAACAATACCTGCACGGCTTTGCACACGT...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp GAAAGGGGTGTCCCTGTCCCAGAATGGTTTGGGGTGGCTCCTGAACTGCTGAGTTGGAAGGGCTGGTTGTaGATGAGAGCAGGAACAGCC +
Preference number: 4 (lower is better)
Translates to: ERGVPVPEWFGVAPELLSWKGWL*MRAGTA
Trigger: GGCTGTTCCTGCTCTCATGCACAACCAGCCCTTCCA...ACTCAGCAGTTCAGGAGCCACCCCAAACCATTCTGGGACAGGGACACCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GAAAGGGGTGTCCCTGTCCCAGAATGGTTTGGGGTGGCTCCTGAACTGCTGAGTGTCCCTGTCCCAGAATaGTTTGGGGTGGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: ERGVPVPEWFGVAPELLSVPVPE*FGVAPE
Trigger: TTCAGGAGCCACCCCAAACCATTCTGGGACAGGGAC...ACTCAGCAGTTCAGGAGCCACCCCAAACCATTCTGGGACAGGGACACCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTCCCCAAACTGGGTGGTaGTGGGGCGCCTGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: FIQESGERSSPPSSTTTAPQTGW*WGACAA
Trigger: GGCAGCACAGGCGCCCCACCACCACCCAGTTTGGGG...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTTACAGGTCAGTTACGTaGACTCGGCAATCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQAYRSVT*TRQSLS
Trigger: GCTCAGGGATTGCCGAGTCCACGTAACTGACCTGTA...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GACGTACCAGCACTGCGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCGATAGGTTCAGGAGGTaGGACCGGGTGGGATTCAGA +
Preference number: 4 (lower is better)
Translates to: DVPALRVDQPRFTCAKPCDRFRR*DRVGFR
Trigger: TCTGAATCCCACCCGGTCCCACCTCCTGAACCTATC...GCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACGCAGTGCTGGTACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCTTCAACAACCACAGCTaGAGATTGATGGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFFNNHS*RLMALE
Trigger: CTCCAACGCCATCAATCTCCAGCTGTGGTTGTTGAA...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTTTCAACAACCACAGCTaGAGATTGATGGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVFNNHS*RLMALE
Trigger: CTCCAACGCCATCAATCTCCAGCTGTGGTTGTTGAA...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
3UTR CAA 72 bp TCCGAGTTCAACAACCACAGCTGGAGATTGATGGCGTaGGAGGGGTCAGCGGATGGGAAGTTGTTAGGGCGG +
Preference number: 4 (lower is better)
Translates to: SEFNNHSWRLMA*EGSADGKLLGR
Trigger: CCGCCCTAACAACTTCCCATCCGCTGACCCCTCCAACGCCATCAATCTCCAGCTGTGGTTGTTGAACTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTGACGGGGTGCCAAGCTaGACTTTGCCCAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FIQESGERSSPPSSTTTADGVPS*TLPRQE
Trigger: CTCCTGCCTGGGCAAAGTCCAGCTTGGCACCCCGTC...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTGGAACAGCAGTCGGCTaGGGCAGGAGAGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: FIQESGERSSPPSSTTTAGTAVG*GRREGS
Trigger: ACTGCCCTCTCTCCTGCCCCAGCCGACTGCTGTTCC...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTACTCCTGAACTCAGGTaGTGTGCCTGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: FIQESGERSSPPSSTTTATPELR*CACLGL
Trigger: GAGGCCAAGGCAGGCACATCACCTGAGTTCAGGAGT...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR GCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTCAACGCAACTTCCCATaGATGGGCCCTGCAGGCATG +
Preference number: 4 (lower is better)
Translates to: FIQESGERSSPPSSTTTAQRNFP*MGPAGM
Trigger: CATGCCTGCAGGGCCCATGCATGGGAAGTTGCGTTG...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTAGGAGAGGAGACGTCTaGGAGGGTTTTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: FIQESGERSSPPSSTTTARRGDV*EGFGWA
Trigger: AGCCCAGCCAAAACCCTCCCAGACGTCTCCTCTCCT...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR TCA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTCCATACCTAGGGCTGTaGAGATCAGAGTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: FIQESGERSSPPSSTTTAPYLGL*RSEFWA
Trigger: AGCCCAGAACTCTGATCTTCACAGCCCTAGGTATGG...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS CCA 90 bp CCGGGGCGCAAGGCGGAGCGGGCTGGGCGGGTTGGGGGTCCTGCCTaGAGCGGAGTCGCGGCCCGGGATGGCACCTCCAGGGCTGAATAC +
Preference number: 5 (lower is better)
Translates to: PGRKAERAGRVGGPA*SGVAARDGTSRAEY
Trigger: GTATTCAGCCCTGGAGGTGCCATCCCGGGCCGCGACTCCGCTCCAGGCAGGACCCCCAACCCGCCCAGCCCGCTCCGCCTTGCGCCCCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395737.2
CDS TCA 90 bp CCAGGCTGCGGGACAGCGAGCCAGGGAGCTGCAGGCAGAGGAGGCTaGTGCAACCCAGGGCGGCCGTCGGGATCCGGGCCATGGCGGGCG +
Preference number: 5 (lower is better)
Translates to: PGCGTASQGAAGRGG*CNPGRPSGSGPWRA
Trigger: CGCCCGCCATGGCCCGGATCCCGACGGCCGCCCTGGGTTGCATCAGCCTCCTCTGCCTGCAGCTCCCTGGCTCGCTGTCCCGCAGCCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp AGCAAGCACAGGGGCGGCGCCTGGGTGGGCGCTTCCAGGACCCTCCCCCTTGGAAGCGGGCTGGGCGGGTaGGGGGTCCTGCCTGGAGCG +
Preference number: 5 (lower is better)
Translates to: SKHRGGAWVGASRTLPLGSGLGG*GVLPGA
Trigger: CGCTCCAGGCAGGACCCCCAACCCGCCCAGCCCGCT...TCCAAGGGGGAGGGTCCTGGAAGCGCCCACCCAGGCGCCGCCCCTGTGCTTGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GCACCTGGTCCCACTGGGTCCCCAAACTGGGTGGTGGTGGGGCGCCTGTGCTGCGGGGGCTCCCTGGGTTaGACGGGTCGCGGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: APGPTGSPNWVVVGRLCCGGSLG*TGRGSP
Trigger: CGGGGACCCGCGACCCGTCAAACCCAGGGAGCCCCC...GCAGCACAGGCGCCCCACCACCACCCAGTTTGGGGACCCAGTGGGACCAGGTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS CCA 90 bp ACCTGGCAGGTGCCCAGCACACAGCCCACTCGCAGGAGCTGGGCTTaGGTCCTGCGGGGGCCCGAGTGTCTTCGGGGGCCCGAGTGTTGG +
Preference number: 5 (lower is better)
Translates to: TWQVPSTQPTRRSWA*VLRGPECLRGPECW
Trigger: CCAACACTCGGGCCCCCGAAGACACTCGGGCCCCCGCAGGACCCAAGCCCAGCTCCTGCGAGTGGGCTGTGTGCTGGGCACCTGCCAGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS CCA 90 bp TTCTGCACCTGGCAGGTGCCCAGCACACAGCCCACTCGCAGGAGCTaGGCTTGGGTCCTGCGGGGGCCCGAGTGTCTTCGGGGGCCCGAG +
Preference number: 5 (lower is better)
Translates to: FCTWQVPSTQPTRRS*AWVLRGPECLRGPE
Trigger: CTCGGGCCCCCGAAGACACTCGGGCCCCCGCAGGACCCAAGCCCAGCTCCTGCGAGTGGGCTGTGTGCTGGGCACCTGCCAGGTGCAGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS GCA 90 bp GGGTCCACAGGAGCTGAGTCCTGCCGGCCGGCCGGTCCCATGAGTTaGCACAGGCGGTGGCTGAGATTCTGCACCTGGCAGGTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: GSTGAESCRPAGPMS*HRRWLRFCTWQVPS
Trigger: GCTGGGCACCTGCCAGGTGCAGAATCTCAGCCACCGCCTGTGGCAACTCATGGGACCGGCCGGCCGGCAGGACTCAGCTCCTGTGGACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGAGCGGGCTGGGCGGGTaGGGGGTCCTGCCTGGAGCG +
Preference number: 5 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGASGLGG*GVLPGA
Trigger: CGCTCCAGGCAGGACCCCCAACCCGCCCAGCCCGCT...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGGGGGGCTCCCTGGGTTaGACGGGTCGCGGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGAGGSLG*TGRGSP
Trigger: CGGGGACCCGCGACCCGTCAAACCCAGGGAGCCCCC...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GAGGGGCCTCACGGAGAGTTGGAGCAGGCACGGAACCGCCAACACCCAGGCCGCTGTGCACCTGGGGCCTaGGCACTCCCAGCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: EGPHGELEQARNRQHPGRCAPGA*ALPAPS
Trigger: GGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA...GCGGCCTGGGTGTTGGCGGTTCCGTGCCTGCTCCAACTCTCCGTGAGGCCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp AGCAAGCACAGGGGCGGCGCCTGGGTGGGCGCTTCCAGGACCCTCCCCCTTGGATGGAGGAGGGAACACTaGGCCCTGACCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: SKHRGGAWVGASRTLPLGWRREH*ALTTGR
Trigger: CCTGCCTGTGGTCAGGGCCAAGTGTTCCCTCCTCCA...TCCAAGGGGGAGGGTCCTGGAAGCGCCCACCCAGGCGCCGCCCCTGTGCTTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS CCA 90 bp GCTGAGTCCTGCCGGCCGGCCGGTCCCATGAGTTGCCACAGGCGGTaGCTGAGATTCTGCACCTGGCAGGTGCCCAGCACACAGCCCACT +
Preference number: 5 (lower is better)
Translates to: AESCRPAGPMSCHRR*LRFCTWQVPSTQPT
Trigger: AGTGGGCTGTGTGCTGGGCACCTGCCAGGTGCAGAATCTCAGCCACCGCCTGTGGCAACTCATGGGACCGGCCGGCCGGCAGGACTCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTTCGGGGGCCCGAGTGTaGGCGGCCACCATCCCGGAG +
Preference number: 5 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVSGARV*AATIPE
Trigger: CTCCGGGATGGTGGCCGCCAACACTCGGGCCCCCGA...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS CCA 90 bp GCCGGTCCCATGAGTTGCCACAGGCGGTGGCTGAGATTCTGCACCTaGCAGGTGCCCAGCACACAGCCCACTCGCAGGAGCTGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: AGPMSCHRRWLRFCT*QVPSTQPTRRSWAW
Trigger: CCAAGCCCAGCTCCTGCGAGTGGGCTGTGTGCTGGGCACCTGCCAGGTGCAGAATCTCAGCCACCGCCTGTGGCAACTCATGGGACCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGGGCCGGTCCCATGAGTaGCCACAGGCGGTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGAGRSHE*PQAVAE
Trigger: CTCAGCCACCGCCTGTGGCAACTCATGGGACCGGCC...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGGCCACCATCCTTCCCTaGCCCAACCCCGGGGGCTAC +
Preference number: 5 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQATILP*PNPGGY
Trigger: GTAGCCCCCGGGGTTGGGCAAGGGAAGGATGGTGGC...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTGGGTGTTTAGGCTCCTaGACGTACCAGCACTGCGTG +
Preference number: 5 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPGCLGS*TYQHCV
Trigger: CACGCAGTGCTGGTACGTCAAGGAGCCTAAACACCC...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTGCCACCATCCTTCCCTaGCCCAACCCCGGGGGCTAC +
Preference number: 5 (lower is better)
Translates to: GDHGDPRGMAERVTLANIATILP*PNPGGY
Trigger: GTAGCCCCCGGGGTTGGGCAAGGGAAGGATGGTGGC...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTCGCCGGCAGTGGTTCTaGTTCTTGCTGTCACTTGGG +
Preference number: 5 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPRRQWF*FLLSLG
Trigger: CCCAAGTGACAGCAAGAACAAGAACCACTGCCGGCG...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GACGTACCAGCACTGCGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCGGCCGGTCCCATGAGTaGCCACAGGCGGTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: DVPALRVDQPRFTCAKPCGRSHE*PQAVAE
Trigger: CTCAGCCACCGCCTGTGGCAACTCATGGGACCGGCC...GCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACGCAGTGCTGGTACGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCAGGGTGTTTAGGCTCCTaGACGTACCAGCACTGCGTG +
Preference number: 5 (lower is better)
Translates to: AGLDCLAVRPITLTTFAAGCLGS*TYQHCV
Trigger: CACGCAGTGCTGGTACGTCAAGGAGCCTAAACACCC...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp TGTGCACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGACGTGGAAGGGCTGGTaGTGCATGAGAGCAGGAACA +
Preference number: 5 (lower is better)
Translates to: CAPGALALPAPSPREGLLTWKGW*CMRAGT
Trigger: TGTTCCTGCTCTCATGCACAACCAGCCCTTCCACGT...CAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCACTGTCCCAGAATGGTTaGGGGTGGCTCCTGAACTGC +
Preference number: 5 (lower is better)
Translates to: AGLDCLAVRPITLTTFAALSQNG*GWLLNC
Trigger: GCAGTTCAGGAGCCACCCCAAACCATTCTGGGACAG...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGTGTGGAGCCCCACCCTaGTCTGGCTGCCAACAAGGG +
Preference number: 5 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQCGAPP*SGCQQG
Trigger: CCCTTGTTGGCAGCCAGACAAGGGTGGGGCTCCACA...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp CACCTGGGGCCTTGGCACTCCCAGCTCCTTCCCCTAGGGAAGGCCTGCTGTCCTCAGTGGTTCTTGTTCTaGCTGTCACTTGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: HLGPWHSQLLPLGKACCPQWFLF*LSLGPG
Trigger: CCCAGGCCCAAGTGACAGCAAGAACAAGAACCACTG...AGGACAGCAGGCCTTCCCTAGGGGAAGGAGCTGGGAGTGCCAAGGCCCCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp TGGGTGCAGGTGCTGCTGGGCCTCCGCGTGATGGTGTCAGGTGGGTCTGATTTCGGTGATGTGCCTGCCTaGGCCTCCCAATGTGCTAGG +
Preference number: 5 (lower is better)
Translates to: WVQVLLGLRVMVSGGSDFGDVPA*ASQCAR
Trigger: CCTAGCACATTGGGAGGCCAAGGCAGGCACATCACC...GAAATCAGACCCACCTGACACCATCACGCGGAGGCCCAGCAGCACCTGCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTGCCGTGCAGGTATTGTaGCTGCAGGACCTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVAVQVL*LQDLLS
Trigger: AGACAGCAGGTCCTGCAGCAACAATACCTGCACGGC...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp AGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCGGCCACAGAGTGTGTCAGGCTTGTGGAGCCCCACCCTaGTCTGGCTGCCAACAAGGG +
Preference number: 5 (lower is better)
Translates to: RKGLRGTCLEFGHRVCQACGAPP*SGCQQG
Trigger: CCCTTGTTGGCAGCCAGACAAGGGTGGGGCTCCACA...AGCCTGACACACTCTGTGGCCGAACTCTAGGCAGGTGCCCCTGAGTCCTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GCTGGCCTTGACTGCCTCGCTGTGCGGCCCATCACCCTGACCACCTTTGCTGCACTCTGTCATCCAAGCTaGAGTGCAGCAGCGCCATCT +
Preference number: 5 (lower is better)
Translates to: AGLDCLAVRPITLTTFAALCHPS*SAAAPS
Trigger: AGATGGCGCTGCTGCACTCAAGCTTGGATGACAGAG...TGCAGCAAAGGTGGTCAGGGTGATGGGCCGCACAGCGAGGCAGTCAAGGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGTGCCACACTCTCCTTCCTaGTCTGACTTCCTGTGGCAC +
Preference number: 5 (lower is better)
Translates to: GGHRENKVPAAELASWSVPHSPS*SDFLWH
Trigger: GTGCCACAGGAAGTCAGACAAGGAAGGAGAGTGTGG...CACGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp ATGGAGGACACCGTGAGAACAAAGTGCCCGCGGCAGAGCTGGCGTCTTGGAGCGAAAGCCGTGCAGGTATaGTTGCTGCAGGACCTGCTG +
Preference number: 5 (lower is better)
Translates to: MEDTVRTKCPRQSWRLGAKAVQV*LLQDLL
Trigger: CAGCAGGTCCTGCAGCAACAATACCTGCACGGCTTT...CGCTCCAAGACGCCAGCTCTGCCGCGGGCACTTTGTTCTCACGGTGTCCTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GGGGGTCAAGGCTGTATCCTCACGTGTCCCAACACGGGTAGGTCACGTGCTCAGCGCCGGCAGTGGTTCTaGTTCTTGCTGTCACTTGGG +
Preference number: 5 (lower is better)
Translates to: GGQGCILTCPNTGRSRAQRRQWF*FLLSLG
Trigger: CCCAAGTGACAGCAAGAACAAGAACCACTGCCGGCG...CTGAGCACGTGACCTACCCGTGTTGGGACACGTGAGGATACAGCCTTGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GACGTACCAGCACTGCGTGTAGACCAGCCTAGGTTTACGTGTGCAAAGCCGTGCTGGAGGAGGGAACACTaGGCCCTGACCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: DVPALRVDQPRFTCAKPCWRREH*ALTTGR
Trigger: CCTGCCTGTGGTCAGGGCCAAGTGTTCCCTCCTCCA...GCACGGCTTTGCACACGTAAACCTAGGCTGGTCTACACGCAGTGCTGGTACGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GGGATGGGGTCAGGCCTCGTCGAGGAAAGGACTCAGGGGCACCTGCCTAGAGTTCCACACTCTCCTTCCTaGTCTGACTTCCTGTGGCAC +
Preference number: 5 (lower is better)
Translates to: GMGSGLVEERTQGHLPRVPHSPS*SDFLWH
Trigger: GTGCCACAGGAAGTCAGACAAGGAAGGAGAGTGTGG...AACTCTAGGCAGGTGCCCCTGAGTCCTTTCCTCGACGAGGCCTGACCCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp CCTCGTGGAGTACAGGTCAGTTACGTGGACTCGGCAATCCCTGAGCTCGGGGAGAAAGCCGTGCAGGTATaGTTGCTGCAGGACCTGCTG +
Preference number: 5 (lower is better)
Translates to: PRGVQVSYVDSAIPELGEKAVQV*LLQDLL
Trigger: CAGCAGGTCCTGCAGCAACAATACCTGCACGGCTTT...CTCCCCGAGCTCAGGGATTGCCGAGTCCACGTAACTGACCTGTACTCCACGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GAAAGGGGTGTCCCTGTCCCAGAATGGTTTGGGGTGGCTCCTGAACTGCTGAGTGGTGATGTGCCTGCCTaGGCCTCCCAATGTGCTAGG +
Preference number: 5 (lower is better)
Translates to: ERGVPVPEWFGVAPELLSGDVPA*ASQCAR
Trigger: CCTAGCACATTGGGAGGCCAAGGCAGGCACATCACC...ACTCAGCAGTTCAGGAGCCACCCCAAACCATTCTGGGACAGGGACACCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTCAGTGGTTCTTGTTCTaGCTGTCACTTGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: GDHGDPRGMAERVTLANIQWFLF*LSLGPG
Trigger: CCCAGGCCCAAGTGACAGCAAGAACAAGAACCACTG...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GGTGATCATGGCGACCCTCGTGGGATGGCCGAGAGGGTGACCCTAGCAAACATTCTCTGTCATCCAAGCTaGAGTGCAGCAGCGCCATCT +
Preference number: 5 (lower is better)
Translates to: GDHGDPRGMAERVTLANILCHPS*SAAAPS
Trigger: AGATGGCGCTGCTGCACTCAAGCTTGGATGACAGAG...AATGTTTGCTAGGGTCACCCTCTCGGCCATCCCACGAGGGTCGCCATGATCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp GAAAGGGGTGTCCCTGTCCCAGAATGGTTTGGGGTGGCTCCTGAACTGCTGAGTACGTGGAAGGGCTGGTaGTGCATGAGAGCAGGAACA +
Preference number: 5 (lower is better)
Translates to: ERGVPVPEWFGVAPELLSTWKGW*CMRAGT
Trigger: TGTTCCTGCTCTCATGCACAACCAGCCCTTCCACGT...ACTCAGCAGTTCAGGAGCCACCCCAAACCATTCTGGGACAGGGACACCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS-3UTR CAA 90 bp TTTATTCAAGAGAGTGGTGAGAGGAGCTCACCTCCGAGTTCAACAACCACAGCTGCCGTGCAGGTATTGTaGCTGCAGGACCTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: FIQESGERSSPPSSTTTAAVQVL*LQDLLS
Trigger: AGACAGCAGGTCCTGCAGCAACAATACCTGCACGGC...AGCTGTGGTTGTTGAACTCGGAGGTGAGCTCCTCTCACCACTCTCTTGAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS CAA 90 bp CACCTGGCAGGTGCCCAGCACACAGCCCACTCGCAGGAGCTGGGCTaGGGTCCTGCGGGGGCCCGAGTGTCTTCGGGGGCCCGAGTGTTG +
Preference number: 6 (lower is better)
Translates to: HLAGAQHTAHSQELG*GPAGARVSSGARVL
Trigger: CAACACTCGGGCCCCCGAAGACACTCGGGCCCCCGCAGGACCCAAGCCCAGCTCCTGCGAGTGGGCTGTGTGCTGGGCACCTGCCAGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS TCA 72 bp GGGCCCGAGTGTTGGCGGCCACCATCCCGGAGAGGCTaGCCCATAACAGGGGCCAGGCCGGCACCCCTCTGT +
Preference number: 6 (lower is better)
Translates to: GPECWRPPSRRG*PITGARPAPLC
Trigger: ACAGAGGGGTGCCGGCCTGGCCCCTGTTATGGGTCAGCCTCTCCGGGATGGTGGCCGCCAACACTCGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS CCA 72 bp TGGCAGGTGCCCAGCACACAGCCCACTCGCAGGAGCTaGGCTTGGGTCCTGCGGGGGCCCGAGTGTCTTCGG +
Preference number: 6 (lower is better)
Translates to: WQVPSTQPTRRS*AWVLRGPECLR
Trigger: CCGAAGACACTCGGGCCCCCGCAGGACCCAAGCCCAGCTCCTGCGAGTGGGCTGTGTGCTGGGCACCTGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2
CDS CCA 72 bp TGCCGGCCGGCCGGTCCCATGAGTTGCCACAGGCGGTaGCTGAGATTCTGCACCTGGCAGGTGCCCAGCACA +
Preference number: 6 (lower is better)
Translates to: CRPAGPMSCHRR*LRFCTWQVPST
Trigger: TGTGCTGGGCACCTGCCAGGTGCAGAATCTCAGCCACCGCCTGTGGCAACTCATGGGACCGGCCGGCCGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395737.2
ENST00000395738.2