RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADK (Homo sapiens)

Ensembl gene IDs: ENSG00000156110

Ensembl transcript IDs: ENST00000286621.7, ENST00000372734.5, ENST00000478611.2, ENST00000539909.6, ENST00000541550.6, ENST00000661461.1, ENST00000672394.1, ENST00000672429.1, ENST00000672604.1, ENST00000672920.1, ENST00000673027.1, ENST00000673310.1, ENST00000673352.1

Found 399 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGGACCTGTTGTCACCAGTGATGCATGCAGCACAAGTTCCTGTTaGCTGCTCATTCTGCTCGTAGTAATGAGCATCCACATGGGCTTC +
Preference number: 1 (lower is better)
Translates to: EGPVVTSDACSTSSC*LLILLVVMSIHMGF
Trigger: GAAGCCCATGTGGATGCTCATTACTACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCTGCATGCATCACTGGTGACAACAGGTCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672920.1
3UTR GCA 90 bp TGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTaGTGCATAGTGGCCAGCACGGATACATTCAGTCAGAGGCTTGTC +
Preference number: 1 (lower is better)
Translates to: WLLRKGAASPSNYDA*CIVASTDTFSQRLV
Trigger: GACAAGCCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000672920.1
ENST00000673310.1
3UTR TCA 90 bp AGATGGAGTTTCACCAACATGGCGGCCAGGCTGGTCTTGAACTCTTaGCCTCTAGTGATACCTGCCTCATCCCAAAGTGGTGGAATTACA +
Preference number: 1 (lower is better)
Translates to: RWSFTNMAARLVLNS*PLVIPASSQSGGIT
Trigger: TGTAATTCCACCACTTTGGGATGAGGCAGGTATCACTAGAGGTCAAGAGTTCAAGACCAGCCTGGCCGCCATGTTGGTGAAACTCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
3UTR GCA 90 bp CTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTaGATAGTGGCCAGCACGGATACATTCAGTCAGAGGCTTGTCAGA +
Preference number: 1 (lower is better)
Translates to: LLRKGAASPSNYDAC*IVASTDTFSQRLVR
Trigger: TCTGACAAGCCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000672920.1
ENST00000673310.1
3UTR GCA 90 bp GCCATTATAGTGTCATCTCTCCCTTGGGTGAAGATCACGATTCGCTaGCTCTTTGAGTTCATCTTTGGCAGGGCTTGTGTCTTTTTGGCT +
Preference number: 1 (lower is better)
Translates to: AIIVSSLPWVKITIR*LFEFIFGRACVFLA
Trigger: AGCCAAAAAGACACAAGCCCTGCCAAAGATGAACTCAAAGAGGCAGCGAATCGTGATCTTCACCCAAGGGAGAGATGACACTATAATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
3UTR CCA 90 bp GCAGTGACTTCACTTTCTGTAGCCATTATAGTGTCATCTCTCCCTTaGGTGAAGATCACGATTCGCTGCCTCTTTGAGTTCATCTTTGGC +
Preference number: 1 (lower is better)
Translates to: AVTSLSVAIIVSSLP*VKITIRCLFEFIFG
Trigger: GCCAAAGATGAACTCAAAGAGGCAGCGAATCGTGATCTTCACCCAAGGGAGAGATGACACTATAATGGCTACAGAAAGTGAAGTCACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
3UTR TCA 90 bp AATGCATCTCCAGCTCCATTGGTATCAATAATTTCTTTCTGGTCTTaGTCCAAGACAGCAAAAGCAGTGACTTCACTTTCTGTAGCCATT +
Preference number: 1 (lower is better)
Translates to: NASPAPLVSIISFWS*SKTAKAVTSLSVAI
Trigger: AATGGCTACAGAAAGTGAAGTCACTGCTTTTGCTGTCTTGGATCAAGACCAGAAAGAAATTATTGATACCAATGGAGCTGGAGATGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
3UTR CAA 90 bp GGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTaGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGA +
Preference number: 2 (lower is better)
Translates to: GNSQEAIRAVSALLG*CFQLFHQWKSGFSG
Trigger: TCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
3UTR CAA 90 bp GAGATGGAGTTTCACCAACATGGCGGCCAGGCTGGTCTTGAACTCTaGACCTCTAGTGATACCTGCCTCATCCCAAAGTGGTGGAATTAC +
Preference number: 2 (lower is better)
Translates to: EMEFHQHGGQAGLEL*TSSDTCLIPKWWNY
Trigger: GTAATTCCACCACTTTGGGATGAGGCAGGTATCACTAGAGGTCAAGAGTTCAAGACCAGCCTGGCCGCCATGTTGGTGAAACTCCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
3UTR-3UTR CCA 90 bp GCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACATTCCAGCTCTTCCATCAGTaGAAGTCTGGCTTCTCAGGA +
Preference number: 2 (lower is better)
Translates to: ASPSNYDACCIVASTDTFQLFHQ*KSGFSG
Trigger: TCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTG...GAATGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
3UTR-3UTR CCA 90 bp GCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACATTCCAGTGTCTGCACTCCTaGGCTTGTGTTTTCAGCTCT +
Preference number: 2 (lower is better)
Translates to: ASPSNYDACCIVASTDTFQCLHS*ACVFSS
Trigger: AGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTG...GAATGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
3UTR-3UTR CCA 90 bp TGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTCAGCTCTTCCATCAGTaGAAGTCTGGCTTCTCAGGA +
Preference number: 2 (lower is better)
Translates to: WKSGFSGKVQPVRLIMMLQLFHQ*KSGFSG
Trigger: TCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTG...AAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
3UTR-3UTR CCA 90 bp GGCCCAGTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAACAGTGTCTGCACTCCTaGGCTTGTGTTTTCAGCTCT +
Preference number: 2 (lower is better)
Translates to: GPVLNNDLSSSVCCTQGKQCLHS*ACVFSS
Trigger: AGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTG...TTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATACTGGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
ENST00000673352.1
3UTR CAA 90 bp ATTCGCTGCCTCTTTGAGTTCATCTTTGGCAGGGCTTGTGTCTTTTaGGCTATCTCTTTAATGTCTTTAGTCTCAAAGCCTTGCTCTCTA +
Preference number: 2 (lower is better)
Translates to: IRCLFEFIFGRACVF*AISLMSLVSKPCSL
Trigger: TAGAGAGCAAGGCTTTGAGACTAAAGACATTAAAGAGATAGCCAAAAAGACACAAGCCCTGCCAAAGATGAACTCAAAGAGGCAGCGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
3UTR-3UTR CCA 90 bp GTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAGACAGACAGTGTCTGCACTCCTaGGCTTGTGTTTTCAGCTCT +
Preference number: 2 (lower is better)
Translates to: VLNNDLSSSVCCTQGKDRQCLHS*ACVFSS
Trigger: AGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTG...TCTGTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
ENST00000673352.1
3UTR-3UTR GCA 90 bp GTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAGACAGACTTTCTTCCTCAGTTTaGTGTACACAGGGAAAAGAC +
Preference number: 2 (lower is better)
Translates to: VLNNDLSSSVCCTQGKDRLSSSV*CTQGKD
Trigger: GTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAG...TCTGTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
ENST00000673352.1
3UTR-3UTR CAA 90 bp GTGGCCAGCACGGATACATTCAGTCAGAGGCTTGTCAGAGACCAGTTGAGACAGCAGCACAAGTTCCTGTaGGCTGCTCATTCTGCTCGT +
Preference number: 3 (lower is better)
Translates to: VASTDTFSQRLVRDQLRQQHKFL*AAHSAR
Trigger: ACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCTG...CTGTCTCAACTGGTCTCTGACAAGCCTCTGACTGAATGTATCCGTGCTGGCCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672920.1
3UTR TCA 72 bp TCTCCCTTGGGTGAAGATCACGATTCGCTGCCTCTTTaGGTTCATCTTTGGCAGGGCTTGTGTCTTTTTGGC +
Preference number: 3 (lower is better)
Translates to: SPLGEDHDSLPL*VHLWQGLCLFG
Trigger: GCCAAAAAGACACAAGCCCTGCCAAAGATGAACTCAAAGAGGCAGCGAATCGTGATCTTCACCCAAGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
3UTR GCA 72 bp AAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTaGATAGTGGCCAGCACGGATACATTCAGTCAGAGG +
Preference number: 3 (lower is better)
Translates to: KGAASPSNYDAC*IVASTDTFSQR
Trigger: CCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000672920.1
ENST00000673310.1
3UTR GCA 72 bp AGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTaGTGCATAGTGGCCAGCACGGATACATTCAGTCAG +
Preference number: 3 (lower is better)
Translates to: RKGAASPSNYDA*CIVASTDTFSQ
Trigger: CTGACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000672920.1
ENST00000673310.1
3UTR GCA 72 bp ATTAGCTATGAGGGACCTGTTGTCACCAGTGATGCATaGAGCACAAGTTCCTGTTGGCTGCTCATTCTGCTC +
Preference number: 3 (lower is better)
Translates to: ISYEGPVVTSDA*STSSCWLLILL
Trigger: GAGCAGAATGAGCAGCCAACAGGAACTTGTGCTGCATGCATCACTGGTGACAACAGGTCCCTCATAGCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672920.1
3UTR CCA 72 bp GTTGTCACCAGTGATGCATGCAGCACAAGTTCCTGTTaGCTGCTCATTCTGCTCGTAGTAATGAGCATCCAC +
Preference number: 3 (lower is better)
Translates to: VVTSDACSTSSC*LLILLVVMSIH
Trigger: GTGGATGCTCATTACTACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCTGCATGCATCACTGGTGACAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672920.1
3UTR-3UTR CAA 90 bp CTGCTCGTAGTAATGAGCATCCACATGGGCTTCAGCAGCTTTTCTCTTCAGGATTGCTTTGTGTGGCTGTaGAATCATCCACCCTGTAAT +
Preference number: 3 (lower is better)
Translates to: LLVVMSIHMGFSSFSLQDCFVWL*NHPPCN
Trigger: ATTACAGGGTGGATGATTCAACAGCCACACAAAGCA...ATCCTGAAGAGAAAAGCTGCTGAAGCCCATGTGGATGCTCATTACTACGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672920.1
3UTR CCA 72 bp TCACTTTCTGTAGCCATTATAGTGTCATCTCTCCCTTaGGTGAAGATCACGATTCGCTGCCTCTTTGAGTTC +
Preference number: 3 (lower is better)
Translates to: SLSVAIIVSSLP*VKITIRCLFEF
Trigger: GAACTCAAAGAGGCAGCGAATCGTGATCTTCACCCAAGGGAGAGATGACACTATAATGGCTACAGAAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
3UTR-3UTR CAA 90 bp GGCCCAGTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAATTCACAATCCTTCTCTaGCCTTTTCCTGTACTGACG +
Preference number: 3 (lower is better)
Translates to: GPVLNNDLSSSVCCTQGKFTILL*PFPVLT
Trigger: CGTCAGTACAGGAAAAGGCAAGAGAAGGATTGTGAA...TTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATACTGGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673310.1
CDS-3UTR TCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCGCCGGCCCGGCGTGCTaGTTGGAGGGAAGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFAGPAC*LEGRRA
Trigger: CGCCCGCCTTCCCTCCAATCAGCACGCCGGGCCGGC...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672394.1
ENST00000672920.1
ENST00000673310.1
CDS-3UTR TCA 90 bp CTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCGCCGGCCCGGCGTGCTaGTTGGAGGGAAGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LRKGAASPSNYDACCIVAAGPAC*LEGRRA
Trigger: CGCCCGCCTTCCCTCCAATCAGCACGCCGGGCCGGC...GGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR GCA 90 bp TTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGGCGCCCGCGTCCGATaGTCTACGTCCGCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: FSSSISGSLASQERCSQSGARVR*STSARA
Trigger: TGCCCGAGCGGACGTAGAGCATCGGACGCGGGCGCC...GGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR GCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCATGGCTTCGCCCTCCTaGCCAGCGCCACGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFMASPS*PAPRRP
Trigger: CGGGCGCCGTGGCGCTGGGCAGGAGGGCGAAGCCAT...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372734.5
ENST00000541550.6
ENST00000672394.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR GCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATGGCTTCGCCCTCCTaGCCAGCGCCACGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSMASPS*PAPRRP
Trigger: CGGGCGCCGTGGCGCTGGGCAGGAGGGCGAAGCCAT...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372734.5
ENST00000541550.6
ENST00000672394.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR TCA 90 bp TGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCGCGGGCTAGCGAGATaGCTAGCGGGCGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: CVFSSSISGSLASQERCSRGLAR*LAGAVA
Trigger: GGCCACCGCGCCCGCTAGTCATCTCGCTAGCCCGCG...GCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673310.1
CDS-3UTR GCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCGGCGCCCGCGTCCGATaGTCTACGTCCGCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSGARVR*STSARA
Trigger: TGCCCGAGCGGACGTAGAGCATCGGACGCGGGCGCC...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372734.5
ENST00000541550.6
ENST00000672394.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR GCA 90 bp GAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATATGGCTTCGCCCTCCTaGCCAGCGCCACGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: EAIRAVSALLGLCFQLFHMASPS*PAPRRP
Trigger: CGGGCGCCGTGGCGCTGGGCAGGAGGGCGAAGCCAT...ATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CCA 90 bp GCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACACGTCCCCAGACGCCGTaGGCCACCGCGTGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: AASPSNYDACCIVASTDTRPQTP*ATACLV
Trigger: CACGAGACACGCGGTGGCCCACGGCGTCTGGGGACG...TGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCGCCCGGCGTGCTGATTaGAGGGAAGGCGGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFARRAD*REGGRS
Trigger: GGAGCGCCCGCCTTCCCTCCAATCAGCACGCCGGGC...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672394.1
ENST00000672920.1
ENST00000673310.1
CDS-3UTR TCA 90 bp CATTCTGCTCGTAGTAATGAGCATCCACATGGGCTTCAGCAGCTTTTCTCTTCAGCCGGCCCGGCGTGCTaGTTGGAGGGAAGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: HSARSNEHPHGLQQLFSSAGPAC*LEGRRA
Trigger: CGCCCGCCTTCCCTCCAATCAGCACGCCGGGCCGGC...TGAAGAGAAAAGCTGCTGAAGCCCATGTGGATGCTCATTACTACGAGCAGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672920.1
CDS-3UTR GCA 90 bp CAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTCCTCCTCAGCAGCTaGCATCTTCGCGCTCCCACC +
Preference number: 4 (lower is better)
Translates to: QLFHQWKSGFSGKVQPVRLLLSS*HLRAPT
Trigger: GGTGGGAGCGCGAAGATGGCAGCTGCTGAGGAGGAG...ACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286621.7
ENST00000673352.1
CDS-3UTR GCA 90 bp TGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCGGCGCCCGCGTCCGATaGTCTACGTCCGCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: CVFSSSISGSLASQERCSGARVR*STSARA
Trigger: TGCCCGAGCGGACGTAGAGCATCGGACGCGGGCGCC...GCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR GCA 90 bp TGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTATGGCTTCGCCCTCCTaGCCAGCGCCACGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: WKSGFSGKVQPVRLIMMLMASPS*PAPRRP
Trigger: CGGGCGCCGTGGCGCTGGGCAGGAGGGCGAAGCCAT...AAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR GCA 90 bp CATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGGGGCGCTCCGCCCCGTaGGAAGGGCTGGAGATCGTC +
Preference number: 4 (lower is better)
Translates to: HQWKSGFSGKVQPVRLIMGRSAP*EGLEIV
Trigger: GACGATCTCCAGCCCTTCGCACGGGGCGGAGCGCCC...CATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CCA 90 bp GGCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGGCCCGGCGTGCTGATTaGAGGGAAGGCGGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GLCFQLFHQWKSGFSGKVARRAD*REGGRS
Trigger: GGAGCGCCCGCCTTCCCTCCAATCAGCACGCCGGGC...CACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR GCA 90 bp TGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATACCACCGCGTGTCTCGTaGCAGCTCACTGGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: WLLRKGAASPSNYDACCIPPRVS*QLTGAR
Trigger: CCGCGCGCCAGTGAGCTGGCACGAGACACGCGGTGG...TATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CCA 90 bp CTGCTCGTAGTAATGAGCATCCACATGGGCTTCAGCAGCTTTTCTCTTCAGGATCGTCCCCAGACGCCGTaGGCCACCGCGTGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: LLVVMSIHMGFSSFSLQDRPQTP*ATACLV
Trigger: CACGAGACACGCGGTGGCCCACGGCGTCTGGGGACG...ATCCTGAAGAGAAAAGCTGCTGAAGCCCATGTGGATGCTCATTACTACGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672920.1
CDS-3UTR CCA 90 bp CATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGCCCCGTGCGAAGGGCTaGAGATCGTCCCCAGACGCC +
Preference number: 4 (lower is better)
Translates to: HQWKSGFSGKVQPVRLIMPRAKG*RSSPDA
Trigger: GGCGTCTGGGGACGATCTCCAGCCCTTCGCACGGGG...CATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CCA 90 bp TGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGCCCGGCGTGCTGATTaGAGGGAAGGCGGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: WLLRKGAASPSNYDACCIARRAD*REGGRS
Trigger: GGAGCGCCCGCCTTCCCTCCAATCAGCACGCCGGGC...TATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR TCA 90 bp TCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGGGCAGAAGGACTGCTTaGAGCCAGGAGACTGAGACC +
Preference number: 4 (lower is better)
Translates to: SALPSVEVWLLRKGAASPGRRTA*SQETET
Trigger: GGTCTCAGTCTCCTGGCTTCAAGCAGTCCTTCTGCC...CGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672920.1
CDS-3UTR GCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCCTCCTCCTCAGCAGCTaGCATCTTCGCGCTCCCACC +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSLLLSS*HLRAPT
Trigger: GGTGGGAGCGCGAAGATGGCAGCTGCTGAGGAGGAG...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000539909.6
ENST00000672429.1
ENST00000673352.1
CDS-3UTR CCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCCAGGCACTCAGCGACTaGGAGCGCGTCCTCACACAC +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSQALSD*ERVLTH
Trigger: GTGTGTGAGGACGCGCTCCCAGTCGCTGAGTGCCTG...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672394.1
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CCA 90 bp GATGCTTGCTGCATAGTGGCCAGCACGGATACATTCAGTCAGAGGCTTGTCAGACAGGCACTCAGCGACTaGGAGCGCGTCCTCACACAC +
Preference number: 4 (lower is better)
Translates to: DACCIVASTDTFSQRLVRQALSD*ERVLTH
Trigger: GTGTGTGAGGACGCGCTCCCAGTCGCTGAGTGCCTG...TCTGACAAGCCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGCATC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CCA 90 bp TGCATAGTGGCCAGCACGGATACATTCAGTCAGAGGCTTGTCAGAGACCAGTTGGCTCCCACCCCACTTTaGCTCTACAGCCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: CIVASTDTFSQRLVRDQLAPTPL*LYSPPL
Trigger: CAGAGGTGGGCTGTAGAGCCAAAGTGGGGTGGGAGC...CAACTGGTCTCTGACAAGCCTCTGACTGAATGTATCCGTGCTGGCCACTATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286621.7
CDS-3UTR CCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCGCTCCCACCCCACTTTaGCTCTACAGCCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSAPTPL*LYSPPL
Trigger: CAGAGGTGGGCTGTAGAGCCAAAGTGGGGTGGGAGC...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000539909.6
ENST00000672429.1
CDS-3UTR CCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCGCTCCCACCCCACTTTaGCTCTACAGCCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFAPTPL*LYSPPL
Trigger: CAGAGGTGGGCTGTAGAGCCAAAGTGGGGTGGGAGC...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000539909.6
ENST00000672429.1
CDS-3UTR GCA 90 bp TGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTCTCCTCCTCAGCAGCTaGCATCTTCGCGCTCCCACC +
Preference number: 4 (lower is better)
Translates to: WKSGFSGKVQPVRLIMMLLLLSS*HLRAPT
Trigger: GGTGGGAGCGCGAAGATGGCAGCTGCTGAGGAGGAG...AAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286621.7
ENST00000673352.1
CDS-3UTR GCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCAGGTACCACAGCAACTaGTTCCCGGCTCAGGCACTC +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFRYHSN*FPAQAL
Trigger: GAGTGCCTGAGCCGGGAAGCAGTTGCTGTGGTACCT...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372734.5
ENST00000541550.6
ENST00000672394.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR GCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCTCTACAGCCCACCTCTaGCATCCACTCTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSSTAHL*HPLSGP
Trigger: GGGACCAGAGAGTGGATGGCAGAGGTGGGCTGTAGA...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672429.1
CDS-3UTR GCA 90 bp GATGCTTGCTGCATAGTGGCCAGCACGGATACATTCAGTCAGAGGCTTGTCAGAGTGATCTTGCCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: DACCIVASTDTFSQRLVRVILPH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGGCAAGATCAC...TCTGACAAGCCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673310.1
CDS-3UTR CCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCGGAAATGGCTCTCAGTaGAGAGGGGAGCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSGNGSQ*RGELER
Trigger: CCTCTCCAGCTCCCCTCTCCACTGAGAGCCATTTCC...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672394.1
CDS-3UTR TCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCCATCTCTCCCTTGGGTaGAGATCACGATTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSHLSLG*RSRFAA
Trigger: GGCAGCGAATCGTGATCTTCACCCAAGGGAGAGATG...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR TCA 90 bp TTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATCAGTGGATTGGGATTACAAGCATaGGCTGCAGCGCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LGQCLHSWACVFSSSISGLGLQA*AAAPGQ
Trigger: TTGGCCAGGCGCTGCAGCTCATGCTTGTAATCCCAA...TCCACTGATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp GTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTTTTCTCTCAGCGCTTaGGGCGCCTCCACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: VEVWLLRKGAASPSNYDAFSLSA*GASTFS
Trigger: GCTGAAGGTGGAGGCGCCGCAAGCGCTGAGAGAAAA...AGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286621.7
ENST00000673352.1
CDS-3UTR GCA 90 bp AAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATCAGGTACCACAGCAACTaGTTCCCGGCTCAGGCACTC +
Preference number: 4 (lower is better)
Translates to: KQLGQCLHSWACVFSSSIRYHSN*FPAQAL
Trigger: GAGTGCCTGAGCCGGGAAGCAGTTGCTGTGGTACCT...GATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR GCA 90 bp TGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCAGGTACCACAGCAACTaGTTCCCGGCTCAGGCACTC +
Preference number: 4 (lower is better)
Translates to: CVFSSSISGSLASQERCSRYHSN*FPAQAL
Trigger: GAGTGCCTGAGCCGGGAAGCAGTTGCTGTGGTACCT...GCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CCA 90 bp GCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTGTGTCATCTCTCCCTTaGGTGAAGATCACGATTCGC +
Preference number: 4 (lower is better)
Translates to: ALPSVEVWLLRKGAASPSVSSLP*VKITIR
Trigger: GCGAATCGTGATCTTCACCCAAGGGAGAGATGACAC...AGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CCA 90 bp TCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGCAGTGTCTGCACTCCTaGGCTTGTGTTTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SALPSVEVWLLRKGAASPQCLHS*ACVFSS
Trigger: AGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTG...CGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp TCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACATTCAGTCAGAGGCAGGCACTCAGCGACTaGGAGCGCGTCCTCACACAC +
Preference number: 4 (lower is better)
Translates to: SNYDACCIVASTDTFSQRQALSD*ERVLTH
Trigger: GTGTGTGAGGACGCGCTCCCAGTCGCTGAGTGCCTG...CCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR TCA 90 bp GCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTCTGAGCCACTTTAATTaGATTCTGGGTAGAGCCACC +
Preference number: 4 (lower is better)
Translates to: ALPSVEVWLLRKGAASPSLSHFN*ILGRAT
Trigger: GGTGGCTCTACCCAGAATTCAATTAAAGTGGCTCAG...AGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp TTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCATCTCTCCCTTGGGTaGAGATCACGATTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: FSALPSVEVWLLRKGAASHLSLG*RSRFAA
Trigger: GGCAGCGAATCGTGATCTTCACCCAAGGGAGAGATG...ACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR TCA 90 bp GGCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCATCTCTCCCTTGGGTaGAGATCACGATTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLCFQLFHQWKSGFSGKVHLSLG*RSRFAA
Trigger: GGCAGCGAATCGTGATCTTCACCCAAGGGAGAGATG...CACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR TCA 90 bp AAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATCCATCTCTCCCTTGGGTaGAGATCACGATTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: KQLGQCLHSWACVFSSSIHLSLG*RSRFAA
Trigger: GGCAGCGAATCGTGATCTTCACCCAAGGGAGAGATG...GATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR TCA 90 bp GTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTTGAAGCCAGGAGACTaGGACCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: VEVWLLRKGAASPSNYDALKPGD*DQPGQH
Trigger: ATGTTGCCCAGGCTGGTCTCAGTCTCCTGGCTTCAA...AGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672920.1
CDS-3UTR TCA 90 bp TTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTTTGGGATTACAAGCATaGGCTGCAGCGCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: FHQWKSGFSGKVQPVRLILGLQA*AAAPGQ
Trigger: TTGGCCAGGCGCTGCAGCTCATGCTTGTAATCCCAA...AATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp AAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATCTGGAGTGCAGTGGTGTaGTCTTGCCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: KQLGQCLHSWACVFSSSIWSAVV*SCLTAT
Trigger: GGTTGCAGTGAGGCAAGATCACACCACTGCACTCCA...GATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673310.1
CDS-3UTR GCA 90 bp TTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCACCAGTGATGCATaGAGCACAAGTTCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: FSSSISGSLASQERCSQSVTSDA*STSSCW
Trigger: CCAACAGGAACTTGTGCTGCATGCATCACTGGTGAC...GGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp TCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGAGCACAAGTTCCTGTTaGCTGCTCATTCTGCTCGTA +
Preference number: 4 (lower is better)
Translates to: SALPSVEVWLLRKGAASPSTSSC*LLILLV
Trigger: TACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCT...CGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp CTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTACAGCTCTTCCATCAGTaGAAGTCTGGCTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LFHQWKSGFSGKVQPVRLQLFHQ*KSGFSG
Trigger: TCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTG...TAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCACCTGTTGTCACCAGTaGTGCATGCAGCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFTCCHQ*CMQHKF
Trigger: GAACTTGTGCTGCATGCATCACTGGTGACAACAGGT...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCACCTGTTGTCACCAGTaGTGCATGCAGCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSTCCHQ*CMQHKF
Trigger: GAACTTGTGCTGCATGCATCACTGGTGACAACAGGT...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp GTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCACCTGTTGTCACCAGTaGTGCATGCAGCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: VFSALPSVEVWLLRKGAATCCHQ*CMQHKF
Trigger: GAACTTGTGCTGCATGCATCACTGGTGACAACAGGT...GGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp TTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCACCTGTTGTCACCAGTaGTGCATGCAGCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: FQLFHQWKSGFSGKVQPVTCCHQ*CMQHKF
Trigger: GAACTTGTGCTGCATGCATCACTGGTGACAACAGGT...GACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp GTGGCCAGCACGGATACATTCAGTCAGAGGCTTGTCAGAGACCAGTTGAGACAGAATATTTTCTCTGACTaGCGTCATGGCTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: VASTDTFSQRLVRDQLRQNIFSD*RHGFAL
Trigger: GAGGGCGAAGCCATGACGTCAGTCAGAGAAAATATT...CTGTCTCAACTGGTCTCTGACAAGCCTCTGACTGAATGTATCCGTGCTGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR TCA 90 bp GCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAGAGAATATTTTCTCTaGCTGACGTCATGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: ALPSVEVWLLRKGAASPSREYFL*LTSWLR
Trigger: GCGAAGCCATGACGTCAGTCAGAGAAAATATTCTCT...AGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR TCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCGTAGGTGGTCTTCCCTaGAGTACAGCAGTAGTCTCT +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSVGGLP*STAVVS
Trigger: AGAGACTACTGCTGTACTTCAGGGAAGACCACCTAC...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672394.1
CDS-3UTR GCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCGTCACCAGTGATGCATaGAGCACAAGTTCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFVTSDA*STSSCW
Trigger: CCAACAGGAACTTGTGCTGCATGCATCACTGGTGAC...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCGTCACCAGTGATGCATaGAGCACAAGTTCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSVTSDA*STSSCW
Trigger: CCAACAGGAACTTGTGCTGCATGCATCACTGGTGAC...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp TTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATCAGTGGAGTCACCAGTGATGCATaGAGCACAAGTTCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LGQCLHSWACVFSSSISGVTSDA*STSSCW
Trigger: CCAACAGGAACTTGTGCTGCATGCATCACTGGTGAC...TCCACTGATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp TCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACATTCAGTCAGAGGAGGTACCACAGCAACTaGTTCCCGGCTCAGGCACTC +
Preference number: 4 (lower is better)
Translates to: SNYDACCIVASTDTFSQRRYHSN*FPAQAL
Trigger: GAGTGCCTGAGCCGGGAAGCAGTTGCTGTGGTACCT...CCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR GCA 90 bp GTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAGACAGAATGGCTTCGCCCTCCTaGCCAGCGCCACGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: VLNNDLSSSVCCTQGKDRMASPS*PAPRRP
Trigger: CGGGCGCCGTGGCGCTGGGCAGGAGGGCGAAGCCAT...TCTGTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372734.5
ENST00000673310.1
CDS-3UTR CCA 90 bp AAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTCCACCTTCAGCTTTTTaGGCTTCGGCTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: KSGFSGKVQPVRLIMMLAPPSAF*ASAPPQ
Trigger: CTGAGGAGGAGCCGAAGCCCAAAAAGCTGAAGGTGG...AGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286621.7
ENST00000673352.1
CDS-3UTR CCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCGTGTCATCTCTCCCTTaGGTGAAGATCACGATTCGC +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFVSSLP*VKITIR
Trigger: GCGAATCGTGATCTTCACCCAAGGGAGAGATGACAC...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR CCA 90 bp GATGCTTGCTGCATAGTGGCCAGCACGGATACATTCAGTCAGAGGCTTGTCAGAGTGTCATCTCTCCCTTaGGTGAAGATCACGATTCGC +
Preference number: 4 (lower is better)
Translates to: DACCIVASTDTFSQRLVRVSSLP*VKITIR
Trigger: GCGAATCGTGATCTTCACCCAAGGGAGAGATGACAC...TCTGACAAGCCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCAGCTCTTCCATCAGTaGAAGTCTGGCTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFQLFHQ*KSGFSG
Trigger: TCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTG...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCCAGCTCTTCCATCAGTaGAAGTCTGGCTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSQLFHQ*KSGFSG
Trigger: TCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTG...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCCAGTGTCTGCACTCCTaGGCTTGTGTTTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSQCLHS*ACVFSS
Trigger: AGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTG...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCAGTGTCTGCACTCCTaGGCTTGTGTTTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFQCLHS*ACVFSS
Trigger: AGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTG...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCTGAGCCACTTTAATTaGATTCTGGGTAGAGCCACC +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFLSHFN*ILGRAT
Trigger: GGTGGCTCTACCCAGAATTCAATTAAAGTGGCTCAG...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp TTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATCAGTGGACTGAGCCACTTTAATTaGATTCTGGGTAGAGCCACC +
Preference number: 4 (lower is better)
Translates to: LGQCLHSWACVFSSSISGLSHFN*ILGRAT
Trigger: GGTGGCTCTACCCAGAATTCAATTAAAGTGGCTCAG...TCCACTGATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp CTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCCTGAGCCACTTTAATTaGATTCTGGGTAGAGCCACC +
Preference number: 4 (lower is better)
Translates to: LRKGAASPSNYDACCIVALSHFN*ILGRAT
Trigger: GGTGGCTCTACCCAGAATTCAATTAAAGTGGCTCAG...GGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp GTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTACCTGTTGTCACCAGTaGTGCATGCAGCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: VEVWLLRKGAASPSNYDATCCHQ*CMQHKF
Trigger: GAACTTGTGCTGCATGCATCACTGGTGACAACAGGT...AGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp AAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATCACCTGTTGTCACCAGTaGTGCATGCAGCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: KQLGQCLHSWACVFSSSITCCHQ*CMQHKF
Trigger: GAACTTGTGCTGCATGCATCACTGGTGACAACAGGT...GATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp GGCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGACCTGTTGTCACCAGTaGTGCATGCAGCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: GLCFQLFHQWKSGFSGKVTCCHQ*CMQHKF
Trigger: GAACTTGTGCTGCATGCATCACTGGTGACAACAGGT...CACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp TGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAACCTGTTGTCACCAGTaGTGCATGCAGCACAAGTTC +
Preference number: 4 (lower is better)
Translates to: CFQLFHQWKSGFSGKVQPTCCHQ*CMQHKF
Trigger: GAACTTGTGCTGCATGCATCACTGGTGACAACAGGT...TGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCAATATTTTCTCTGACTaGCGTCATGGCTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSNIFSD*RHGFAL
Trigger: GAGGGCGAAGCCATGACGTCAGTCAGAGAAAATATT...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000372734.5
ENST00000541550.6
ENST00000672394.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR TCA 90 bp TTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATCAGTGGAAATATTTTCTCTGACTaGCGTCATGGCTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGQCLHSWACVFSSSISGNIFSD*RHGFAL
Trigger: GAGGGCGAAGCCATGACGTCAGTCAGAGAAAATATT...TCCACTGATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR TCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCAATATTTTCTCTGACTaGCGTCATGGCTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFNIFSD*RHGFAL
Trigger: GAGGGCGAAGCCATGACGTCAGTCAGAGAAAATATT...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000372734.5
ENST00000541550.6
ENST00000672394.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR TCA 90 bp GTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTCTGGTCTTGAACTCTTaGCCTCTAGTGATACCTGCC +
Preference number: 4 (lower is better)
Translates to: VEVWLLRKGAASPSNYDALVLNS*PLVIPA
Trigger: GGCAGGTATCACTAGAGGTCAAGAGTTCAAGACCAG...AGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp TGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCACTGGTCTTGAACTCTTaGCCTCTAGTGATACCTGCC +
Preference number: 4 (lower is better)
Translates to: CFQLFHQWKSGFSGKVQPLVLNS*PLVIPA
Trigger: GGCAGGTATCACTAGAGGTCAAGAGTTCAAGACCAG...TGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp GCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCGTCACCAGTGATGCATaGAGCACAAGTTCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: ACVFSSSISGSLASQERCVTSDA*STSSCW
Trigger: CCAACAGGAACTTGTGCTGCATGCATCACTGGTGAC...GCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp CTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTATCTAATTATGATGCTTaGTGCATAGTGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: LFHQWKSGFSGKVQPVRLSNYDA*CIVAST
Trigger: CGTGCTGGCCACTATGCAGCAAGCATCATAATTAGA...TAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp TTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCTCTAATTATGATGCTTaGTGCATAGTGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: FSSSISGSLASQERCSQSSNYDA*CIVAST
Trigger: CGTGCTGGCCACTATGCAGCAAGCATCATAATTAGA...GGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp GTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAGACAGAGGCGCCCGCGTCCGATaGTCTACGTCCGCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: VLNNDLSSSVCCTQGKDRGARVR*STSARA
Trigger: TGCCCGAGCGGACGTAGAGCATCGGACGCGGGCGCC...TCTGTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372734.5
ENST00000673310.1
CDS-3UTR GCA 90 bp CAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTAAAACCTCCAACAAATaGATCTCCAGCTCCATTGGT +
Preference number: 4 (lower is better)
Translates to: QLFHQWKSGFSGKVQPVRKTSNK*ISSSIG
Trigger: ACCAATGGAGCTGGAGATGCATTTGTTGGAGGTTTT...ACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCCAAGTTCATCAAACCTaGACTCCGTGGGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSQVHQT*TPWVLS
Trigger: ACTCAGAACCCACGGAGTGCAGGTTTGATGAACTTG...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672394.1
CDS-3UTR CCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCAGCACAAGTTCCTGTTaGCTGCTCATTCTGCTCGTA +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFSTSSC*LLILLV
Trigger: TACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCT...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp AGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCAGCACAAGTTCCTGTTaGCTGCTCATTCTGCTCGTA +
Preference number: 4 (lower is better)
Translates to: RKGAASPSNYDACCIVASSTSSC*LLILLV
Trigger: TACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCT...GCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCAGCACAAGTTCCTGTTaGCTGCTCATTCTGCTCGTA +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSSTSSC*LLILLV
Trigger: TACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCT...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp TTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGCACAAGTTCCTGTTaGCTGCTCATTCTGCTCGTA +
Preference number: 4 (lower is better)
Translates to: LGQCLHSWACVFSSSISGSTSSC*LLILLV
Trigger: TACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCT...TCCACTGATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp GCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACATTCGTGTCATCTCTCCCTTaGGTGAAGATCACGATTCGC +
Preference number: 4 (lower is better)
Translates to: ASPSNYDACCIVASTDTFVSSLP*VKITIR
Trigger: GCGAATCGTGATCTTCACCCAAGGGAGAGATGACAC...GAATGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CCA 90 bp TGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGCTCTTCCATCAGTaGAAGTCTGGCTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: CVFSSSISGSLASQERCSQLFHQ*KSGFSG
Trigger: TCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTG...GCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp GGGCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTCAGTGTCTGCACTCCTaGGCTTGTGTTTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GLVFSALPSVEVWLLRKGQCLHS*ACVFSS
Trigger: AGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTG...ACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp CATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGCAGTGTCTGCACTCCTaGGCTTGTGTTTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HQWKSGFSGKVQPVRLIMQCLHS*ACVFSS
Trigger: AGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTG...CATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp GCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACATTCCTGAGCCACTTTAATTaGATTCTGGGTAGAGCCACC +
Preference number: 4 (lower is better)
Translates to: ASPSNYDACCIVASTDTFLSHFN*ILGRAT
Trigger: GGTGGCTCTACCCAGAATTCAATTAAAGTGGCTCAG...GAATGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp TTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCTTTTCAGAAGCATGGTaGGCCACCTTTAATACTGAC +
Preference number: 4 (lower is better)
Translates to: FSSSISGSLASQERCSQSFSEAW*ATFNTD
Trigger: GTCAGTATTAAAGGTGGCTCACCATGCTTCTGAAAA...GGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp GCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAATATTTTCTCTGACTaGCGTCATGGCTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: ACVFSSSISGSLASQERCNIFSD*RHGFAL
Trigger: GAGGGCGAAGCCATGACGTCAGTCAGAGAAAATATT...GCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR TCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCAGAGAATATTTTCTCTaGCTGACGTCATGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSREYFL*LTSWLR
Trigger: GCGAAGCCATGACGTCAGTCAGAGAAAATATTCTCT...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000372734.5
ENST00000541550.6
ENST00000672394.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR TCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCAGAGAATATTTTCTCTaGCTGACGTCATGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFREYFL*LTSWLR
Trigger: GCGAAGCCATGACGTCAGTCAGAGAAAATATTCTCT...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000372734.5
ENST00000541550.6
ENST00000672394.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR TCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCTTGTCAGAGACCAGTTaGGACAGAAAACCTCCAACA +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFLSETS*DRKPPT
Trigger: TGTTGGAGGTTTTCTGTCTCAACTGGTCTCTGACAA...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCTTGTCAGAGACCAGTTaGGACAGAAAACCTCCAACA +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSLSETS*DRKPPT
Trigger: TGTTGGAGGTTTTCTGTCTCAACTGGTCTCTGACAA...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp AGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCTTGTCAGAGACCAGTTaGGACAGAAAACCTCCAACA +
Preference number: 4 (lower is better)
Translates to: RKGAASPSNYDACCIVASLSETS*DRKPPT
Trigger: TGTTGGAGGTTTTCTGTCTCAACTGGTCTCTGACAA...GCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp GTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCTTGTCAGAGACCAGTTaGGACAGAAAACCTCCAACA +
Preference number: 4 (lower is better)
Translates to: VFSALPSVEVWLLRKGAALSETS*DRKPPT
Trigger: TGTTGGAGGTTTTCTGTCTCAACTGGTCTCTGACAA...GGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCCAAGAAGAAGGAAGTaGTGCAGACACTTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFPRRRK*CRHLKD
Trigger: ATCCTTCAAGTGTCTGCATCACTTCCTTCTTCTTGG...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672394.1
CDS-3UTR TCA 90 bp TTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCAGACAGCAAAAGCAGTaGCTTCACTTTCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: FQLFHQWKSGFSGKVQPVRQQKQ*LHFLKA
Trigger: GGCTTTGAGAAAGTGAAGTCACTGCTTTTGCTGTCT...GACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673352.1
CDS-3UTR GCA 90 bp TGCATAGTGGCCAGCACGGATACATTCAGTCAGAGGCTTGTCAGAGACCAGTTGAATTATGATGCTTGCTaGATAGTGGCCAGCACGGAT +
Preference number: 4 (lower is better)
Translates to: CIVASTDTFSQRLVRDQLNYDAC*IVASTD
Trigger: ATCCGTGCTGGCCACTATGCAGCAAGCATCATAATT...CAACTGGTCTCTGACAAGCCTCTGACTGAATGTATCCGTGCTGGCCACTATGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000672920.1
ENST00000673310.1
CDS-3UTR GCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCAATTATGATGCTTGCTaGATAGTGGCCAGCACGGAT +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSNYDAC*IVASTD
Trigger: ATCCGTGCTGGCCACTATGCAGCAAGCATCATAATT...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCAATTATGATGCTTGCTaGATAGTGGCCAGCACGGAT +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFNYDAC*IVASTD
Trigger: ATCCGTGCTGGCCACTATGCAGCAAGCATCATAATT...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp TTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCAATTATGATGCTTGCTaGATAGTGGCCAGCACGGAT +
Preference number: 4 (lower is better)
Translates to: FQLFHQWKSGFSGKVQPVNYDAC*IVASTD
Trigger: ATCCGTGCTGGCCACTATGCAGCAAGCATCATAATT...GACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp GATGCTTGCTGCATAGTGGCCAGCACGGATACATTCAGTCAGAGGCTTGTCAGATCTAATTATGATGCTTaGTGCATAGTGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: DACCIVASTDTFSQRLVRSNYDA*CIVAST
Trigger: CGTGCTGGCCACTATGCAGCAAGCATCATAATTAGA...TCTGACAAGCCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGCATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000672920.1
ENST00000673310.1
CDS-3UTR GCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCTCTAATTATGATGCTTaGTGCATAGTGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFSNYDA*CIVAST
Trigger: CGTGCTGGCCACTATGCAGCAAGCATCATAATTAGA...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCTCTAATTATGATGCTTaGTGCATAGTGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSSNYDA*CIVAST
Trigger: CGTGCTGGCCACTATGCAGCAAGCATCATAATTAGA...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp GCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACATCTAATTATGATGCTTaGTGCATAGTGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: AASPSNYDACCIVASTDTSNYDA*CIVAST
Trigger: CGTGCTGGCCACTATGCAGCAAGCATCATAATTAGA...TGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCTCCATCTCCAACAAATaGATCTCCAGCTCCATTGGT +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFSISNK*ISSSIG
Trigger: ACCAATGGAGCTGGAGATGCATTTGTTGGAGATGGA...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541550.6
CDS-3UTR GCA 90 bp CTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAAAAACCTCAAAGCCTTaGTCTCTAGCAAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: LFHQWKSGFSGKVQPVRLKTSKP*SLAKVA
Trigger: TGCCACTTTTGCTAGAGAGCAAGGCTTTGAGGTTTT...TAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672604.1
CDS-3UTR CCA 90 bp GCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACATTCAGCACAAGTTCCTGTTaGCTGCTCATTCTGCTCGTA +
Preference number: 4 (lower is better)
Translates to: ASPSNYDACCIVASTDTFSTSSC*LLILLV
Trigger: TACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCT...GAATGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp GTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTAGCACAAGTTCCTGTTaGCTGCTCATTCTGCTCGTA +
Preference number: 4 (lower is better)
Translates to: VEVWLLRKGAASPSNYDASTSSC*LLILLV
Trigger: TACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCT...AGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp CATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGAGCACAAGTTCCTGTTaGCTGCTCATTCTGCTCGTA +
Preference number: 4 (lower is better)
Translates to: HQWKSGFSGKVQPVRLIMSTSSC*LLILLV
Trigger: TACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCT...CATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp CTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGTGTCATCTCTCCCTTaGGTGAAGATCACGATTCGC +
Preference number: 4 (lower is better)
Translates to: LLRKGAASPSNYDACCIVVSSLP*VKITIR
Trigger: GCGAATCGTGATCTTCACCCAAGGGAGAGATGACAC...CACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CCA 90 bp CTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGCAGTGTCTGCACTCCTaGGCTTGTGTTTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LLRKGAASPSNYDACCIVQCLHS*ACVFSS
Trigger: AGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTG...CACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp GCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTATTCCATTAACAAATTaGGTGTCATTTCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: ALPSVEVWLLRKGAASPSIPLTN*VSFQGP
Trigger: TGGGCCCTGAAATGACACCCAATTTGTTAATGGAAT...AGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCCTTTTCCCGAAAGTCTaGCAGAATCTCTCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSLFPKV*QNLSSL
Trigger: TAGAGAGGAGAGATTCTGCCAGACTTTCGGGAAAAG...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672394.1
CDS-3UTR CCA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACCTGCCATCCACTCTCTaGTCCCGCCCCCTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: FFFINMGILRKQLGQCLHLPSTL*SRPLFA
Trigger: TGCGAAGAGGGGGCGGGACCAGAGAGTGGATGGCAG...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672429.1
CDS-3UTR CCA 90 bp TGCATAGTGGCCAGCACGGATACATTCAGTCAGAGGCTTGTCAGAGACCAGTTGTGCCTCATCCCAAAGTaGTGGAATTACAGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: CIVASTDTFSQRLVRDQLCLIPK*WNYRCK
Trigger: CTTACACCTGTAATTCCACCACTTTGGGATGAGGCA...CAACTGGTCTCTGACAAGCCTCTGACTGAATGTATCCGTGCTGGCCACTATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673310.1
CDS-3UTR TCA 90 bp TGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTCTGAGCCACTTTAATTaGATTCTGGGTAGAGCCACC +
Preference number: 4 (lower is better)
Translates to: WKSGFSGKVQPVRLIMMLLSHFN*ILGRAT
Trigger: GGTGGCTCTACCCAGAATTCAATTAAAGTGGCTCAG...AAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp TTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATCAGTGGATTTTCAGAAGCATGGTaGGCCACCTTTAATACTGAC +
Preference number: 4 (lower is better)
Translates to: LGQCLHSWACVFSSSISGFSEAW*ATFNTD
Trigger: GTCAGTATTAAAGGTGGCTCACCATGCTTCTGAAAA...TCCACTGATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCTTTTCAGAAGCATGGTaGGCCACCTTTAATACTGAC +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSFSEAW*ATFNTD
Trigger: GTCAGTATTAAAGGTGGCTCACCATGCTTCTGAAAA...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp GCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACATTTTCAGAAGCATGGTaGGCCACCTTTAATACTGAC +
Preference number: 4 (lower is better)
Translates to: AASPSNYDACCIVASTDTFSEAW*ATFNTD
Trigger: GTCAGTATTAAAGGTGGCTCACCATGCTTCTGAAAA...TGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCTTTTCAGAAGCATGGTaGGCCACCTTTAATACTGAC +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFFSEAW*ATFNTD
Trigger: GTCAGTATTAAAGGTGGCTCACCATGCTTCTGAAAA...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp CAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGAGAGAATATTTTCTCTaGCTGACGTCATGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: QWKSGFSGKVQPVRLIMMREYFL*LTSWLR
Trigger: GCGAAGCCATGACGTCAGTCAGAGAAAATATTCTCT...CATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR TCA 90 bp TTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTAGAGAATATTTTCTCTaGCTGACGTCATGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: FSALPSVEVWLLRKGAASREYFL*LTSWLR
Trigger: GCGAAGCCATGACGTCAGTCAGAGAAAATATTCTCT...ACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR TCA 90 bp GAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATTTGTCAGAGACCAGTTaGGACAGAAAACCTCCAACA +
Preference number: 4 (lower is better)
Translates to: EAIRAVSALLGLCFQLFHLSETS*DRKPPT
Trigger: TGTTGGAGGTTTTCTGTCTCAACTGGTCTCTGACAA...ATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp CATAGTGGCCAGCACGGATACATTCAGTCAGAGGCTTGTCAGAGACCAGTTGAGTTAGTCTCAAAGCCTTaGTCTCTAGCAAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: HSGQHGYIQSEACQRPVELVSKP*SLAKVA
Trigger: TGCCACTTTTGCTAGAGAGCAAGGCTTTGAGACTAA...CTCAACTGGTCTCTGACAAGCCTCTGACTGAATGTATCCGTGCTGGCCACTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000672920.1
ENST00000673310.1
CDS-3UTR GCA 90 bp TGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCTCTAATTATGATGCTTaGTGCATAGTGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: CVFSSSISGSLASQERCSSNYDA*CIVAST
Trigger: CGTGCTGGCCACTATGCAGCAAGCATCATAATTAGA...GCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCAAAACCTCCAACAAATaGATCTCCAGCTCCATTGGT +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFKTSNK*ISSSIG
Trigger: ACCAATGGAGCTGGAGATGCATTTGTTGGAGGTTTT...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCAAAACCTCCAACAAATaGATCTCCAGCTCCATTGGT +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSKTSNK*ISSSIG
Trigger: ACCAATGGAGCTGGAGATGCATTTGTTGGAGGTTTT...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp CTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAAAACCTCCAACAAATaGATCTCCAGCTCCATTGGT +
Preference number: 4 (lower is better)
Translates to: LRKGAASPSNYDACCIVAKTSNK*ISSSIG
Trigger: ACCAATGGAGCTGGAGATGCATTTGTTGGAGGTTTT...GGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCCTTTCTTCCTCAGTTTaGTGTACACAGGGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSLSSSV*CTQGKD
Trigger: GTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAG...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp CAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTTCTTCAGCCAAGATTTaGTCATTTGGTTTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: QLFHQWKSGFSGKVQPVRSSAKI*SFGFRE
Trigger: TTCTCTGAAACCAAATGACCAAATCTTGGCTGAAGA...ACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp CAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCCACTGTTAGCTGTTTaGAGTGTTTCTTCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: QWKSGFSGKVQPVRLIMMPLLAV*SVSSWN
Trigger: GTTCCAGGAAGAAACACTCCAAACAGCTAACAGTGG...CATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286621.7
CDS-3UTR CCA 90 bp AGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACATTCAGTCAGTGTCTGCACTCCTaGGCTTGTGTTTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SPSNYDACCIVASTDTFSQCLHS*ACVFSS
Trigger: AGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTG...ACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CCA 90 bp GAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATTGCCTCATCCCAAAGTaGTGGAATTACAGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: EAIRAVSALLGLCFQLFHCLIPK*WNYRCK
Trigger: CTTACACCTGTAATTCCACCACTTTGGGATGAGGCA...ATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCGTAGAGCCACCAGCATaGTATTCGACTTTGAATTTT +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFVEPPA*YSTLNF
Trigger: AAAATTCAAAGTCGAATATCATGCTGGTGGCTCTAC...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCGTAGAGCCACCAGCATaGTATTCGACTTTGAATTTT +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSVEPPA*YSTLNF
Trigger: AAAATTCAAAGTCGAATATCATGCTGGTGGCTCTAC...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp GCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACATTCTTTTCAGAAGCATGGTaGGCCACCTTTAATACTGAC +
Preference number: 4 (lower is better)
Translates to: ASPSNYDACCIVASTDTFFSEAW*ATFNTD
Trigger: GTCAGTATTAAAGGTGGCTCACCATGCTTCTGAAAA...GAATGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp TGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCATTTTCAGAAGCATGGTaGGCCACCTTTAATACTGAC +
Preference number: 4 (lower is better)
Translates to: CFQLFHQWKSGFSGKVQPFSEAW*ATFNTD
Trigger: GTCAGTATTAAAGGTGGCTCACCATGCTTCTGAAAA...TGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp GTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAGACAGACTCCTCCTCAGCAGCTaGCATCTTCGCGCTCCCACC +
Preference number: 4 (lower is better)
Translates to: VLNNDLSSSVCCTQGKDRLLLSS*HLRAPT
Trigger: GGTGGGAGCGCGAAGATGGCAGCTGCTGAGGAGGAG...TCTGTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539909.6
ENST00000673352.1
CDS-3UTR GCA 90 bp TTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTTTAGTCTCAAAGCCTTaGTCTCTAGCAAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: FHQWKSGFSGKVQPVRLILVSKP*SLAKVA
Trigger: TGCCACTTTTGCTAGAGAGCAAGGCTTTGAGACTAA...AATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR GCA 90 bp AGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCAAGATCACGATTCGCTaGCTCTTTGAGTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: RKGAASPSNYDACCIVASKITIR*LFEFIF
Trigger: AAAGATGAACTCAAAGAGGCAGCGAATCGTGATCTT...GCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR GCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCAAGATCACGATTCGCTaGCTCTTTGAGTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSKITIR*LFEFIF
Trigger: AAAGATGAACTCAAAGAGGCAGCGAATCGTGATCTT...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR GCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCAAGATCACGATTCGCTaGCTCTTTGAGTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFKITIR*LFEFIF
Trigger: AAAGATGAACTCAAAGAGGCAGCGAATCGTGATCTT...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR GCA 90 bp TGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCTATACCTCCAACAAATaGATCTCCAGCTCCATTGGT +
Preference number: 4 (lower is better)
Translates to: CVFSSSISGSLASQERCSYTSNK*ISSSIG
Trigger: ACCAATGGAGCTGGAGATGCATTTGTTGGAGGTATA...GCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286621.7
CDS-3UTR GCA 90 bp AGCCATTATAGTGTCATCTCTCCCTTGGGTGAAGATCACGATTCGCTGCCTCTTAATTATGATGCTTGCTaGATAGTGGCCAGCACGGAT +
Preference number: 4 (lower is better)
Translates to: SHYSVISPLGEDHDSLPLNYDAC*IVASTD
Trigger: ATCCGTGCTGGCCACTATGCAGCAAGCATCATAATT...AAGAGGCAGCGAATCGTGATCTTCACCCAAGGGAGAGATGACACTATAATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR GCA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACAGGTACCACAGCAACTaGTTCCCGGCTCAGGCACTC +
Preference number: 4 (lower is better)
Translates to: FFFINMGILRKQLGQCLHRYHSN*FPAQAL
Trigger: GAGTGCCTGAGCCGGGAAGCAGTTGCTGTGGTACCT...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372734.5
ENST00000541550.6
ENST00000672394.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR GCA 90 bp GAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATAAAACCTCCAACAAATaGATCTCCAGCTCCATTGGT +
Preference number: 4 (lower is better)
Translates to: EAIRAVSALLGLCFQLFHKTSNK*ISSSIG
Trigger: ACCAATGGAGCTGGAGATGCATTTGTTGGAGGTTTT...ATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp GGGCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTCTTTCTTCCTCAGTTTaGTGTACACAGGGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: GLVFSALPSVEVWLLRKGLSSSV*CTQGKD
Trigger: GTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAG...ACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp GCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCCTTTCTTCCTCAGTTTaGTGTACACAGGGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: ACVFSSSISGSLASQERCLSSSV*CTQGKD
Trigger: GTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAG...GCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCAGGTATCCACCACCATaGCTGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFRYPPP*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGGTGGTGGATACCT...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp TTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTACTTTCTCAAAGCCTTaGTCTCTAGCAAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: FHQWKSGFSGKVQPVRLITFSKP*SLAKVA
Trigger: TGCCACTTTTGCTAGAGAGCAAGGCTTTGAGAAAGT...AATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673352.1
CDS-3UTR CCA 90 bp GCTTGCTGCATAGTGGCCAGCACGGATACATTCAGTCAGAGGCTTGTCAGAGACTCTTCAGCCAAGATTTaGTCATTTGGTTTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: ACCIVASTDTFSQRLVRDSSAKI*SFGFRE
Trigger: TTCTCTGAAACCAAATGACCAAATCTTGGCTGAAGA...GTCTCTGACAAGCCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCATTCCATTAACAAATTaGGTGTCATTTCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFIPLTN*VSFQGP
Trigger: TGGGCCCTGAAATGACACCCAATTTGTTAATGGAAT...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp GCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACAACTGTGCCCAGCCTGTaGCTGGATAATTTAAAAATT +
Preference number: 4 (lower is better)
Translates to: AASPSNYDACCIVASTDTTVPSL*LDNLKI
Trigger: AATTTTTAAATTATCCAGCCACAGGCTGGGCACAGT...TGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp GTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTGTAGAGCCACCAGCATaGTATTCGACTTTGAATTTT +
Preference number: 4 (lower is better)
Translates to: VEVWLLRKGAASPSNYDAVEPPA*YSTLNF
Trigger: AAAATTCAAAGTCGAATATCATGCTGGTGGCTCTAC...AGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp GGCCCAGTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAACATCTCTCCCTTGGGTaGAGATCACGATTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: GPVLNNDLSSSVCCTQGKHLSLG*RSRFAA
Trigger: GGCAGCGAATCGTGATCTTCACCCAAGGGAGAGATG...TTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATACTGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
CDS-3UTR TCA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACCATCTCTCCCTTGGGTaGAGATCACGATTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: FFFINMGILRKQLGQCLHHLSLG*RSRFAA
Trigger: GGCAGCGAATCGTGATCTTCACCCAAGGGAGAGATG...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR TCA 90 bp TGCATAGTGGCCAGCACGGATACATTCAGTCAGAGGCTTGTCAGAGACCAGTTGAAACAGAGTAGAAAGTaGTTATTTCATTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: CIVASTDTFSQRLVRDQLKQSRK*LFHSAT
Trigger: GGTGGCTGAATGAAATAATCACTTTCTACTCTGTTT...CAACTGGTCTCTGACAAGCCTCTGACTGAATGTATCCGTGCTGGCCACTATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286621.7
CDS-3UTR GCA 90 bp CTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGTTAGTCTCAAAGCCTTaGTCTCTAGCAAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: LLRKGAASPSNYDACCIVLVSKP*SLAKVA
Trigger: TGCCACTTTTGCTAGAGAGCAAGGCTTTGAGACTAA...CACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR GCA 90 bp CTGCTCGTAGTAATGAGCATCCACATGGGCTTCAGCAGCTTTTCTCTTCAGGATTTAGTCTCAAAGCCTTaGTCTCTAGCAAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: LLVVMSIHMGFSSFSLQDLVSKP*SLAKVA
Trigger: TGCCACTTTTGCTAGAGAGCAAGGCTTTGAGACTAA...ATCCTGAAGAGAAAAGCTGCTGAAGCCCATGTGGATGCTCATTACTACGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672920.1
CDS-3UTR GCA 90 bp TGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAAAGATCACGATTCGCTaGCTCTTTGAGTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: CFQLFHQWKSGFSGKVQPKITIR*LFEFIF
Trigger: AAAGATGAACTCAAAGAGGCAGCGAATCGTGATCTT...TGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR GCA 90 bp AAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATCAAGATCACGATTCGCTaGCTCTTTGAGTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: KQLGQCLHSWACVFSSSIKITIR*LFEFIF
Trigger: AAAGATGAACTCAAAGAGGCAGCGAATCGTGATCTT...GATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR GCA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCAAAAGTGGCAGCTTCTaGTATATAACAAACTCTTGC +
Preference number: 4 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSKSGSF*YITNSC
Trigger: GCAAGAGTTTGTTATATAGCAGAAGCTGCCACTTTT...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672429.1
CDS-3UTR GCA 90 bp TTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTAGGTATCCACCACCATaGCTGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: FHQWKSGFSGKVQPVRLIRYPPP*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGGTGGTGGATACCT...AATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp GGCCCAGTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAACCACCTTCAGCTTTTTaGGCTTCGGCTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GPVLNNDLSSSVCCTQGKPPSAF*ASAPPQ
Trigger: CTGAGGAGGAGCCGAAGCCCAAAAAGCTGAAGGTGG...TTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATACTGGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539909.6
ENST00000673352.1
CDS-3UTR CCA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCTCTTCAGCCAAGATTTaGTCATTTGGTTTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFSSAKI*SFGFRE
Trigger: TTCTCTGAAACCAAATGACCAAATCTTGGCTGAAGA...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp CTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCTCTTCAGCCAAGATTTaGTCATTTGGTTTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LRKGAASPSNYDACCIVASSAKI*SFGFRE
Trigger: TTCTCTGAAACCAAATGACCAAATCTTGGCTGAAGA...GGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp CATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATTCCATTAACAAATTaGGTGTCATTTCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: HQWKSGFSGKVQPVRLIMIPLTN*VSFQGP
Trigger: TGGGCCCTGAAATGACACCCAATTTGTTAATGGAAT...CATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp CAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGACTGTGCCCAGCCTGTaGCTGGATAATTTAAAAATT +
Preference number: 4 (lower is better)
Translates to: QWKSGFSGKVQPVRLIMMTVPSL*LDNLKI
Trigger: AATTTTTAAATTATCCAGCCACAGGCTGGGCACAGT...CATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp CTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGTAGAGCCACCAGCATaGTATTCGACTTTGAATTTT +
Preference number: 4 (lower is better)
Translates to: LLRKGAASPSNYDACCIVVEPPA*YSTLNF
Trigger: AAAATTCAAAGTCGAATATCATGCTGGTGGCTCTAC...CACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp TGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGTAGAGCCACCAGCATaGTATTCGACTTTGAATTTT +
Preference number: 4 (lower is better)
Translates to: WKSGFSGKVQPVRLIMMLVEPPA*YSTLNF
Trigger: AAAATTCAAAGTCGAATATCATGCTGGTGGCTCTAC...AAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp TCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACATTCAGTCAGAGGTTGTCAGAGACCAGTTaGGACAGAAAACAGAGTAGA +
Preference number: 4 (lower is better)
Translates to: SNYDACCIVASTDTFSQRLSETS*DRKQSR
Trigger: TCTACTCTGTTTTCTGTCTCAACTGGTCTCTGACAA...CCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286621.7
CDS-3UTR TCA 90 bp CAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGAGGTCATATAAAGTCTaGCTCCAGAAGTCCAATTAT +
Preference number: 4 (lower is better)
Translates to: QWKSGFSGKVQPVRLIMMRSYKV*LQKSNY
Trigger: ATAATTGGACTTCTGGAGTCAGACTTTATATGACCT...CATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp GCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGGTCATATAAAGTCTaGCTCCAGAAGTCCAATTAT +
Preference number: 4 (lower is better)
Translates to: ACVFSSSISGSLASQERCRSYKV*LQKSNY
Trigger: ATAATTGGACTTCTGGAGTCAGACTTTATATGACCT...GCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp GTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTCTTCAGCCAAGATTTaGTCATTTGGTTTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: VEVWLLRKGAASPSNYDASSAKI*SFGFRE
Trigger: TTCTCTGAAACCAAATGACCAAATCTTGGCTGAAGA...AGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACAGTGATGCAGACACTTaGAGGATGGTGAAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: FFFINMGILRKQLGQCLHSDADT*RMVKVE
Trigger: CTCCACCTTCACCATCCTTCAAGTGTCTGCATCACT...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672394.1
CDS-3UTR GCA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACGTCACCAGTGATGCATaGAGCACAAGTTCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: FFFINMGILRKQLGQCLHVTSDA*STSSCW
Trigger: CCAACAGGAACTTGTGCTGCATGCATCACTGGTGAC...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACGTGTCATCTCTCCCTTaGGTGAAGATCACGATTCGC +
Preference number: 4 (lower is better)
Translates to: FFFINMGILRKQLGQCLHVSSLP*VKITIR
Trigger: GCGAATCGTGATCTTCACCCAAGGGAGAGATGACAC...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR CCA 90 bp GGCCCAGTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAGTGTCATCTCTCCCTTaGGTGAAGATCACGATTCGC +
Preference number: 4 (lower is better)
Translates to: GPVLNNDLSSSVCCTQGKVSSLP*VKITIR
Trigger: GCGAATCGTGATCTTCACCCAAGGGAGAGATGACAC...TTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATACTGGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
CDS-3UTR CCA 90 bp GGCCCAGTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAACAGCTCTTCCATCAGTaGAAGTCTGGCTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GPVLNNDLSSSVCCTQGKQLFHQ*KSGFSG
Trigger: TCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTG...TTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATACTGGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp GGCCCAGTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAACAGCTTCAAGACACTTaGAAGCAAGAGGGCCACTCT +
Preference number: 4 (lower is better)
Translates to: GPVLNNDLSSSVCCTQGKQLQDT*KQEGHS
Trigger: AGAGTGGCCCTCTTGCTTCCAAGTGTCTTGAAGCTG...TTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATACTGGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673310.1
CDS-3UTR TCA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACCTGAGCCACTTTAATTaGATTCTGGGTAGAGCCACC +
Preference number: 4 (lower is better)
Translates to: FFFINMGILRKQLGQCLHLSHFN*ILGRAT
Trigger: GGTGGCTCTACCCAGAATTCAATTAAAGTGGCTCAG...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACAATATTTTCTCTGACTaGCGTCATGGCTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: FFFINMGILRKQLGQCLHNIFSD*RHGFAL
Trigger: GAGGGCGAAGCCATGACGTCAGTCAGAGAAAATATT...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372734.5
ENST00000541550.6
ENST00000672394.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR CCA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACAGCACAAGTTCCTGTTaGCTGCTCATTCTGCTCGTA +
Preference number: 4 (lower is better)
Translates to: FFFINMGILRKQLGQCLHSTSSC*LLILLV
Trigger: TACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCT...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp ATCCAAGACAGCAAAAGCAGTGACTTCACTTTCTGTAGCCATTATAGTGTCATCTTTTCAGAAGCATGGTaGGCCACCTTTAATACTGAC +
Preference number: 4 (lower is better)
Translates to: IQDSKSSDFTFCSHYSVIFSEAW*ATFNTD
Trigger: GTCAGTATTAAAGGTGGCTCACCATGCTTCTGAAAA...GATGACACTATAATGGCTACAGAAAGTGAAGTCACTGCTTTTGCTGTCTTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR TCA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACAGAGAATATTTTCTCTaGCTGACGTCATGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: FFFINMGILRKQLGQCLHREYFL*LTSWLR
Trigger: GCGAAGCCATGACGTCAGTCAGAGAAAATATTCTCT...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372734.5
ENST00000541550.6
ENST00000672394.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR GCA 90 bp TTTCTGGTCTTGATCCAAGACAGCAAAAGCAGTGACTTCACTTTCTGTAGCCATAAGATCACGATTCGCTaGCTCTTTGAGTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: FLVLIQDSKSSDFTFCSHKITIR*LFEFIF
Trigger: AAAGATGAACTCAAAGAGGCAGCGAATCGTGATCTT...ATGGCTACAGAAAGTGAAGTCACTGCTTTTGCTGTCTTGGATCAAGACCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR GCA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACAATTATGATGCTTGCTaGATAGTGGCCAGCACGGAT +
Preference number: 4 (lower is better)
Translates to: FFFINMGILRKQLGQCLHNYDAC*IVASTD
Trigger: ATCCGTGCTGGCCACTATGCAGCAAGCATCATAATT...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp GGCCCAGTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAAATTATGATGCTTGCTaGATAGTGGCCAGCACGGAT +
Preference number: 4 (lower is better)
Translates to: GPVLNNDLSSSVCCTQGKNYDAC*IVASTD
Trigger: ATCCGTGCTGGCCACTATGCAGCAAGCATCATAATT...TTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATACTGGGCC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACTTTTCAGAAGCATGGTaGGCCACCTTTAATACTGAC +
Preference number: 4 (lower is better)
Translates to: FFFINMGILRKQLGQCLHFSEAW*ATFNTD
Trigger: GTCAGTATTAAAGGTGGCTCACCATGCTTCTGAAAA...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR TCA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACACACTTGAAGGATGGTaGAGGTGGAGAATTTTACTG +
Preference number: 4 (lower is better)
Translates to: FFFINMGILRKQLGQCLHTLEGW*RWRILL
Trigger: CAGTAAAATTCTCCACCTTCACCATCCTTCAAGTGT...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672394.1
CDS-3UTR GCA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACTTAGTCTCAAAGCCTTaGTCTCTAGCAAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: FFFINMGILRKQLGQCLHLVSKP*SLAKVA
Trigger: TGCCACTTTTGCTAGAGAGCAAGGCTTTGAGACTAA...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR GCA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACAAAACCTCCAACAAATaGATCTCCAGCTCCATTGGT +
Preference number: 4 (lower is better)
Translates to: FFFINMGILRKQLGQCLHKTSNK*ISSSIG
Trigger: ACCAATGGAGCTGGAGATGCATTTGTTGGAGGTTTT...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp TTTCTGGTCTTGATCCAAGACAGCAAAAGCAGTGACTTCACTTTCTGTAGCCATTCTTCAGCCAAGATTTaGTCATTTGGTTTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: FLVLIQDSKSSDFTFCSHSSAKI*SFGFRE
Trigger: TTCTCTGAAACCAAATGACCAAATCTTGGCTGAAGA...ATGGCTACAGAAAGTGAAGTCACTGCTTTTGCTGTCTTGGATCAAGACCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR GCA 90 bp GTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAGACAGAAATTATGATGCTTGCTaGATAGTGGCCAGCACGGAT +
Preference number: 4 (lower is better)
Translates to: VLNNDLSSSVCCTQGKDRNYDAC*IVASTD
Trigger: ATCCGTGCTGGCCACTATGCAGCAAGCATCATAATT...TCTGTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp GTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAGACAGATCTAATTATGATGCTTaGTGCATAGTGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: VLNNDLSSSVCCTQGKDRSNYDA*CIVAST
Trigger: CGTGCTGGCCACTATGCAGCAAGCATCATAATTAGA...TCTGTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
ENST00000673352.1
CDS-3UTR GCA 90 bp GTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAGACAGATTAGTCTCAAAGCCTTaGTCTCTAGCAAAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: VLNNDLSSSVCCTQGKDRLVSKP*SLAKVA
Trigger: TGCCACTTTTGCTAGAGAGCAAGGCTTTGAGACTAA...TCTGTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
CDS-3UTR CCA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACTCTTCAGCCAAGATTTaGTCATTTGGTTTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: FFFINMGILRKQLGQCLHSSAKI*SFGFRE
Trigger: TTCTCTGAAACCAAATGACCAAATCTTGGCTGAAGA...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CCA 90 bp GTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAGACAGATCTTCAGCCAAGATTTaGTCATTTGGTTTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: VLNNDLSSSVCCTQGKDRSSAKI*SFGFRE
Trigger: TTCTCTGAAACCAAATGACCAAATCTTGGCTGAAGA...TCTGTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
ENST00000673352.1
CDS GCA 90 bp CCGGCCCGGCGTGCTGATTGGAGGGAAGGCGGGCGCTCCGCCCCGTaGGAAGGGCTGGAGATCGTCCCCAGACGCCGTGGGCCACCGCGT +
Preference number: 5 (lower is better)
Translates to: PARRADWREGGRSAP*EGLEIVPRRRGPPR
Trigger: ACGCGGTGGCCCACGGCGTCTGGGGACGATCTCCAGCCCTTCGCACGGGGCGGAGCGCCCGCCTTCCCTCCAATCAGCACGCCGGGCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS GCA 90 bp GGGCTGGAGATCGTCCCCAGACGCCGTGGGCCACCGCGTGTCTCGTaGCAGCTCACTGGCGCGCGGGCTAGCGAGATGACTAGCGGGCGC +
Preference number: 5 (lower is better)
Translates to: GLEIVPRRRGPPRVS*QLTGARASEMTSGR
Trigger: GCGCCCGCTAGTCATCTCGCTAGCCCGCGCGCCAGTGAGCTGGCACGAGACACGCGGTGGCCCACGGCGTCTGGGGACGATCTCCAGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673310.1
CDS CCA 90 bp GTGCTGATTGGAGGGAAGGCGGGCGCTCCGCCCCGTGCGAAGGGCTaGAGATCGTCCCCAGACGCCGTGGGCCACCGCGTGTCTCGTGCC +
Preference number: 5 (lower is better)
Translates to: VLIGGKAGAPPRAKG*RSSPDAVGHRVSRA
Trigger: GGCACGAGACACGCGGTGGCCCACGGCGTCTGGGGACGATCTCCAGCCCTTCGCACGGGGCGGAGCGCCCGCCTTCCCTCCAATCAGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS CCA 90 bp AGCAGGTACCACAGCAACTGCTTCCCGGCTCAGGCACTCAGCGACTaGGAGCGCGTCCTCACACACCCCGCGCGCGGGCGGCCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: SRYHSNCFPAQALSD*ERVLTHPARGRPLA
Trigger: AGCCAGGGGCCGCCCGCGCGCGGGGTGTGTGAGGACGCGCTCCCAGTCGCTGAGTGCCTGAGCCGGGAAGCAGTTGCTGTGGTACCTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672394.1
ENST00000672920.1
ENST00000673310.1
CDS GCA 90 bp TCATGGCTTCGCCCTCCTGCCCAGCGCCACGGCGCCCGCGTCCGATaGTCTACGTCCGCTCGGGCAGCAGCAGGTACCACAGCAACTGCT +
Preference number: 5 (lower is better)
Translates to: SWLRPPAQRHGARVR*STSARAAAGTTATA
Trigger: AGCAGTTGCTGTGGTACCTGCTGCTGCCCGAGCGGACGTAGAGCATCGGACGCGGGCGCCGTGGCGCTGGGCAGGAGGGCGAAGCCATGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372734.5
ENST00000541550.6
ENST00000672394.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS CCA 90 bp CGGCTCCTCCTCAGCAGCTGCCATCTTCGCGCTCCCACCCCACTTTaGCTCTACAGCCCACCTCTGCCATCCACTCTCTGGTCCCGCCCC +
Preference number: 5 (lower is better)
Translates to: RLLLSSCHLRAPTPL*LYSPPLPSTLWSRP
Trigger: GGGGCGGGACCAGAGAGTGGATGGCAGAGGTGGGCTGTAGAGCCAAAGTGGGGTGGGAGCGCGAAGATGGCAGCTGCTGAGGAGGAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672429.1
CDS GCA 90 bp CGCCTCCACCTTCAGCTTTTTGGGCTTCGGCTCCTCCTCAGCAGCTaGCATCTTCGCGCTCCCACCCCACTTTGGCTCTACAGCCCACCT +
Preference number: 5 (lower is better)
Translates to: RLHLQLFGLRLLLSS*HLRAPTPLWLYSPP
Trigger: AGGTGGGCTGTAGAGCCAAAGTGGGGTGGGAGCGCGAAGATGGCAGCTGCTGAGGAGGAGCCGAAGCCCAAAAAGCTGAAGGTGGAGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000478611.2
ENST00000539909.6
ENST00000672429.1
ENST00000673352.1
CDS GCA 90 bp CCAAAGAGAATATTTTCTCTGACTGACGTCATGGCTTCGCCCTCCTaGCCAGCGCCACGGCGCCCGCGTCCGATGCTCTACGTCCGCTCG +
Preference number: 5 (lower is better)
Translates to: PKRIFSLTDVMASPS*PAPRRPRPMLYVRS
Trigger: CGAGCGGACGTAGAGCATCGGACGCGGGCGCCGTGGCGCTGGGCAGGAGGGCGAAGCCATGACGTCAGTCAGAGAAAATATTCTCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372734.5
ENST00000541550.6
ENST00000672394.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS CCA 90 bp GAATATTTTCTCTCAGCGCTTGCGGCGCCTCCACCTTCAGCTTTTTaGGCTTCGGCTCCTCCTCAGCAGCTGCCATCTTCGCGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: EYFLSALAAPPPSAF*ASAPPQQLPSSRSH
Trigger: GTGGGAGCGCGAAGATGGCAGCTGCTGAGGAGGAGCCGAAGCCCAAAAAGCTGAAGGTGGAGGCGCCGCAAGCGCTGAGAGAAAATATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000539909.6
ENST00000672429.1
ENST00000673352.1
CDS-3UTR CAA 90 bp AGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCCGCTCCCACCCCACTTaGGCTCTACAGCCCACCTCT +
Preference number: 5 (lower is better)
Translates to: RKGAASPSNYDACCIVASRSHPT*ALQPTS
Trigger: AGAGGTGGGCTGTAGAGCCAAAGTGGGGTGGGAGCG...GCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286621.7
CDS-3UTR CAA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCCGCTCCCACCCCACTTaGGCTCTACAGCCCACCTCT +
Preference number: 5 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSRSHPT*ALQPTS
Trigger: AGAGGTGGGCTGTAGAGCCAAAGTGGGGTGGGAGCG...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000539909.6
ENST00000672429.1
CDS-3UTR CAA 90 bp GCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTATTTTCTCTCAGCGCTaGCGGCGCCTCCACCTTCAG +
Preference number: 5 (lower is better)
Translates to: ALPSVEVWLLRKGAASPSIFSQR*RRLHLQ
Trigger: CTGAAGGTGGAGGCGCCGCAAGCGCTGAGAGAAAAT...AGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286621.7
ENST00000673352.1
CDS-3UTR CAA 90 bp CTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTATCCACCTTCAGCTTTTaGGGCTTCGGCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LFHQWKSGFSGKVQPVRLSTFSF*GFGSSS
Trigger: TGAGGAGGAGCCGAAGCCCAAAAAGCTGAAGGTGGA...TAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286621.7
ENST00000673352.1
CDS-3UTR CAA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCATTTTCTCTCAGCGCTaGCGGCGCCTCCACCTTCAG +
Preference number: 5 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFIFSQR*RRLHLQ
Trigger: CTGAAGGTGGAGGCGCCGCAAGCGCTGAGAGAAAAT...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000539909.6
ENST00000672429.1
ENST00000673352.1
CDS-3UTR CAA 90 bp TCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGCAGCACAAGTTCCTGTaGGCTGCTCATTCTGCTCGT +
Preference number: 5 (lower is better)
Translates to: SALPSVEVWLLRKGAASPQHKFL*AAHSAR
Trigger: ACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCTG...CGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTGCTATGAGGGACCTGTaGTCACCAGTGATGCATGCA +
Preference number: 5 (lower is better)
Translates to: ALPSVEVWLLRKGAASPSAMRDL*SPVMHA
Trigger: TGCATGCATCACTGGTGACAACAGGTCCCTCATAGC...AGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GGCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGATTTTCTCTCAGCGCTaGCGGCGCCTCCACCTTCAG +
Preference number: 5 (lower is better)
Translates to: GLCFQLFHQWKSGFSGKVIFSQR*RRLHLQ
Trigger: CTGAAGGTGGAGGCGCCGCAAGCGCTGAGAGAAAAT...CACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286621.7
ENST00000673352.1
CDS-3UTR CAA 90 bp TTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTTGCAGTGGTGTGATCTaGCCTCACTGCAACCTCCGC +
Preference number: 5 (lower is better)
Translates to: FSALPSVEVWLLRKGAASCSGVI*PHCNLR
Trigger: GCGGAGGTTGCAGTGAGGCAAGATCACACCACTGCA...ACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673310.1
CDS-3UTR CAA 90 bp GGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATTGCTTTGTGTGGCTGTaGAATCATCCACTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: GAASPSNYDACCIVASTDCFVWL*NHPLSH
Trigger: GTGGCTCAGTGGATGATTCAACAGCCACACAAAGCA...ATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCCAGCACAAGTTCCTGTaGGCTGCTCATTCTGCTCGT +
Preference number: 5 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSQHKFL*AAHSAR
Trigger: ACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCTG...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp TTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATCAGTGGACAGCACAAGTTCCTGTaGGCTGCTCATTCTGCTCGT +
Preference number: 5 (lower is better)
Translates to: LGQCLHSWACVFSSSISGQHKFL*AAHSAR
Trigger: ACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCTG...TCCACTGATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCAGCACAAGTTCCTGTaGGCTGCTCATTCTGCTCGT +
Preference number: 5 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFQHKFL*AAHSAR
Trigger: ACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCTG...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACACAGCACAAGTTCCTGTaGGCTGCTCATTCTGCTCGT +
Preference number: 5 (lower is better)
Translates to: AASPSNYDACCIVASTDTQHKFL*AAHSAR
Trigger: ACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCTG...TGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCGCTATGAGGGACCTGTaGTCACCAGTGATGCATGCA +
Preference number: 5 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFAMRDL*SPVMHA
Trigger: TGCATGCATCACTGGTGACAACAGGTCCCTCATAGC...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp TTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATCAGTGGAGCTATGAGGGACCTGTaGTCACCAGTGATGCATGCA +
Preference number: 5 (lower is better)
Translates to: LGQCLHSWACVFSSSISGAMRDL*SPVMHA
Trigger: TGCATGCATCACTGGTGACAACAGGTCCCTCATAGC...TCCACTGATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCGCTATGAGGGACCTGTaGTCACCAGTGATGCATGCA +
Preference number: 5 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSAMRDL*SPVMHA
Trigger: TGCATGCATCACTGGTGACAACAGGTCCCTCATAGC...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp AGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCGCTATGAGGGACCTGTaGTCACCAGTGATGCATGCA +
Preference number: 5 (lower is better)
Translates to: RKGAASPSNYDACCIVASAMRDL*SPVMHA
Trigger: TGCATGCATCACTGGTGACAACAGGTCCCTCATAGC...GCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp CTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCGCTATGAGGGACCTGTaGTCACCAGTGATGCATGCA +
Preference number: 5 (lower is better)
Translates to: LRKGAASPSNYDACCIVAAMRDL*SPVMHA
Trigger: TGCATGCATCACTGGTGACAACAGGTCCCTCATAGC...GGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp TCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGCATCTTTGGCAGGGCTaGTGTCTTTTTGGCTATCTC +
Preference number: 5 (lower is better)
Translates to: SALPSVEVWLLRKGAASPHLWQG*CLFGYL
Trigger: GAGATAGCCAAAAAGACACAAGCCCTGCCAAAGATG...CGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCCGATTCGCTGCCTCTTaGAGTTCATCTTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSRFAAS*SSSLAG
Trigger: CCCTGCCAAAGATGAACTCAAAGAGGCAGCGAATCG...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR CAA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCGATTCGCTGCCTCTTaGAGTTCATCTTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFRFAAS*SSSLAG
Trigger: CCCTGCCAAAGATGAACTCAAAGAGGCAGCGAATCG...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR CAA 90 bp GCTTGCTGCATAGTGGCCAGCACGGATACATTCAGTCAGAGGCTTGTCAGAGACAGTGTCATCTCTCCCTaGGGTGAAGATCACGATTCG +
Preference number: 5 (lower is better)
Translates to: ACCIVASTDTFSQRLVRDSVISP*GEDHDS
Trigger: CGAATCGTGATCTTCACCCAAGGGAGAGATGACACT...GTCTCTGACAAGCCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp CAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTTGTCAGAGACCAGTaGAGACAGAAAACCTCCAAC +
Preference number: 5 (lower is better)
Translates to: QLFHQWKSGFSGKVQPVRLVRDQ*RQKTSN
Trigger: GTTGGAGGTTTTCTGTCTCAACTGGTCTCTGACAAG...ACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp TTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGCTGGTCTTGAACTCTaGACCTCTAGTGATACCTGC +
Preference number: 5 (lower is better)
Translates to: FSSSISGSLASQERCSQSAGLEL*TSSDTC
Trigger: GCAGGTATCACTAGAGGTCAAGAGTTCAAGACCAGC...GGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATGCTGGTCTTGAACTCTaGACCTCTAGTGATACCTGC +
Preference number: 5 (lower is better)
Translates to: GAASPSNYDACCIVASTDAGLEL*TSSDTC
Trigger: GCAGGTATCACTAGAGGTCAAGAGTTCAAGACCAGC...ATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCTGCTTTGTGTGGCTGTaGAATCATCCACTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSCFVWL*NHPLSH
Trigger: GTGGCTCAGTGGATGATTCAACAGCCACACAAAGCA...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCTGCTTTGTGTGGCTGTaGAATCATCCACTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFCFVWL*NHPLSH
Trigger: GTGGCTCAGTGGATGATTCAACAGCCACACAAAGCA...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GGCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCACAAGTTCCTGTaGGCTGCTCATTCTGCTCGT +
Preference number: 5 (lower is better)
Translates to: GLCFQLFHQWKSGFSGKVQHKFL*AAHSAR
Trigger: ACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCTG...CACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GGGCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCTATGAGGGACCTGTaGTCACCAGTGATGCATGCA +
Preference number: 5 (lower is better)
Translates to: GLVFSALPSVEVWLLRKGAMRDL*SPVMHA
Trigger: TGCATGCATCACTGGTGACAACAGGTCCCTCATAGC...ACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp CAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTTTTAGTCTCAAAGCCTaGCTCTCTAGCAAAAGTGGC +
Preference number: 5 (lower is better)
Translates to: QLFHQWKSGFSGKVQPVRFSLKA*LSSKSG
Trigger: GCCACTTTTGCTAGAGAGCAAGGCTTTGAGACTAAA...ACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp CATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGCGATTCGCTGCCTCTTaGAGTTCATCTTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: HQWKSGFSGKVQPVRLIMRFAAS*SSSLAG
Trigger: CCCTGCCAAAGATGAACTCAAAGAGGCAGCGAATCG...CATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp GTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTCGATTCGCTGCCTCTTaGAGTTCATCTTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: VEVWLLRKGAASPSNYDARFAAS*SSSLAG
Trigger: CCCTGCCAAAGATGAACTCAAAGAGGCAGCGAATCG...AGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp GTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTGTCATCTCTCCCTaGGGTGAAGATCACGATTCG +
Preference number: 5 (lower is better)
Translates to: VFSALPSVEVWLLRKGAASVISP*GEDHDS
Trigger: CGAATCGTGATCTTCACCCAAGGGAGAGATGACACT...GGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCAGTGTCATCTCTCCCTaGGGTGAAGATCACGATTCG +
Preference number: 5 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSSVISP*GEDHDS
Trigger: CGAATCGTGATCTTCACCCAAGGGAGAGATGACACT...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR CAA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCAGTGTCATCTCTCCCTaGGGTGAAGATCACGATTCG +
Preference number: 5 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFSVISP*GEDHDS
Trigger: CGAATCGTGATCTTCACCCAAGGGAGAGATGACACT...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR CAA 90 bp CTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCTCTGCACTCCTGGGCTaGTGTTTTCAGCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: LRKGAASPSNYDACCIVASALLG*CFQLFH
Trigger: ATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGA...GGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCTCTGCACTCCTGGGCTaGTGTTTTCAGCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSSALLG*CFQLFH
Trigger: ATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGA...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCTCTGCACTCCTGGGCTaGTGTTTTCAGCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFSALLG*CFQLFH
Trigger: ATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGA...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp AAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATCTGCTTTGTGTGGCTGTaGAATCATCCACTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: KQLGQCLHSWACVFSSSICFVWL*NHPLSH
Trigger: GTGGCTCAGTGGATGATTCAACAGCCACACAAAGCA...GATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp CTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTATTTAGTCTCAAAGCCTaGCTCTCTAGCAAAAGTGGC +
Preference number: 5 (lower is better)
Translates to: LFHQWKSGFSGKVQPVRLFSLKA*LSSKSG
Trigger: GCCACTTTTGCTAGAGAGCAAGGCTTTGAGACTAAA...TAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATCTTTGGCAGGGCTaGTGTCTTTTTGGCTATCTC +
Preference number: 5 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFHLWQG*CLFGYL
Trigger: GAGATAGCCAAAAAGACACAAGCCCTGCCAAAGATG...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR CAA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCCATCTTTGGCAGGGCTaGTGTCTTTTTGGCTATCTC +
Preference number: 5 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSHLWQG*CLFGYL
Trigger: GAGATAGCCAAAAAGACACAAGCCCTGCCAAAGATG...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR CAA 90 bp AGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCCATCTTTGGCAGGGCTaGTGTCTTTTTGGCTATCTC +
Preference number: 5 (lower is better)
Translates to: RKGAASPSNYDACCIVASHLWQG*CLFGYL
Trigger: GAGATAGCCAAAAAGACACAAGCCCTGCCAAAGATG...GCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp CTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGCGATTCGCTGCCTCTTaGAGTTCATCTTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LLRKGAASPSNYDACCIVRFAAS*SSSLAG
Trigger: CCCTGCCAAAGATGAACTCAAAGAGGCAGCGAATCG...CACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp GTGGCCAGCACGGATACATTCAGTCAGAGGCTTGTCAGAGACCAGTTGAGACAGTCCACTGTTAGCTGTTaGGAGTGTTTCTTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: VASTDTFSQRLVRDQLRQSTVSC*ECFFLE
Trigger: TTCCAGGAAGAAACACTCCAAACAGCTAACAGTGGA...CTGTCTCAACTGGTCTCTGACAAGCCTCTGACTGAATGTATCCGTGCTGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286621.7
CDS-3UTR CAA 90 bp TTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTTCTGCACTCCTGGGCTaGTGTTTTCAGCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: FSALPSVEVWLLRKGAASSALLG*CFQLFH
Trigger: ATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGA...ACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATTCTGCACTCCTGGGCTaGTGTTTTCAGCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: EAIRAVSALLGLCFQLFHSALLG*CFQLFH
Trigger: ATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGA...ATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCTTGTCAGAGACCAGTaGAGACAGAAAACCTCCAAC +
Preference number: 5 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFLVRDQ*RQKTSN
Trigger: GTTGGAGGTTTTCTGTCTCAACTGGTCTCTGACAAG...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCCTTGTCAGAGACCAGTaGAGACAGAAAACCTCCAAC +
Preference number: 5 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSLVRDQ*RQKTSN
Trigger: GTTGGAGGTTTTCTGTCTCAACTGGTCTCTGACAAG...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp CTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCCTTGTCAGAGACCAGTaGAGACAGAAAACCTCCAAC +
Preference number: 5 (lower is better)
Translates to: LRKGAASPSNYDACCIVALVRDQ*RQKTSN
Trigger: GTTGGAGGTTTTCTGTCTCAACTGGTCTCTGACAAG...GGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATTTCACAATCCTTCTCTaGCCTTTTCCTGTACTGACG +
Preference number: 5 (lower is better)
Translates to: GAASPSNYDACCIVASTDFTILL*PFPVLT
Trigger: CGTCAGTACAGGAAAAGGCAAGAGAAGGATTGTGAA...ATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673310.1
CDS-3UTR CAA 90 bp GCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACACACTTTCTCAAAGCCTaGCTCTCTAGCAAAAGTGGC +
Preference number: 5 (lower is better)
Translates to: AASPSNYDACCIVASTDTHFLKA*LSSKSG
Trigger: GCCACTTTTGCTAGAGAGCAAGGCTTTGAGAAAGTG...TGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673352.1
CDS-3UTR CAA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACCGCTCCCACCCCACTTaGGCTCTACAGCCCACCTCT +
Preference number: 5 (lower is better)
Translates to: FFFINMGILRKQLGQCLHRSHPT*ALQPTS
Trigger: AGAGGTGGGCTGTAGAGCCAAAGTGGGGTGGGAGCG...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000539909.6
ENST00000672429.1
CDS-3UTR CAA 90 bp GGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATGTCTTCAGCCAAGATTaGGTCATTTGGTTTCAGAGA +
Preference number: 5 (lower is better)
Translates to: GAASPSNYDACCIVASTDVFSQD*VIWFQR
Trigger: TCTCTGAAACCAAATGACCAAATCTTGGCTGAAGAC...ATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GCTTGCTGCATAGTGGCCAGCACGGATACATTCAGTCAGAGGCTTGTCAGAGACAACAGTTCCTTGTGTTaGTCTTCAGCCAAGATTTGG +
Preference number: 5 (lower is better)
Translates to: ACCIVASTDTFSQRLVRDNSSLC*SSAKIW
Trigger: CCAAATCTTGGCTGAAGACAAACACAAGGAACTGTT...GTCTCTGACAAGCCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp TTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCTCATCAAACAGTTCCTaGTGTTTGTCTTCAGCCAAG +
Preference number: 5 (lower is better)
Translates to: FSSSISGSLASQERCSQSSSNSS*CLSSAK
Trigger: CTTGGCTGAAGACAAACACAAGGAACTGTTTGATGA...GGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp CTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGTGCTTTGTGTGGCTGTaGAATCATCCACTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: LLRKGAASPSNYDACCIVCFVWL*NHPLSH
Trigger: GTGGCTCAGTGGATGATTCAACAGCCACACAAAGCA...CACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp TGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTTGCTTTGTGTGGCTGTaGAATCATCCACTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: WKSGFSGKVQPVRLIMMLCFVWL*NHPLSH
Trigger: GTGGCTCAGTGGATGATTCAACAGCCACACAAAGCA...AAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672604.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp AGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACATTCAGTCAGCACAAGTTCCTGTaGGCTGCTCATTCTGCTCGT +
Preference number: 5 (lower is better)
Translates to: SPSNYDACCIVASTDTFSQHKFL*AAHSAR
Trigger: ACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCTG...ACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCTTTAGTCTCAAAGCCTaGCTCTCTAGCAAAAGTGGC +
Preference number: 5 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSFSLKA*LSSKSG
Trigger: GCCACTTTTGCTAGAGAGCAAGGCTTTGAGACTAAA...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR CAA 90 bp TGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCACATCTTTGGCAGGGCTaGTGTCTTTTTGGCTATCTC +
Preference number: 5 (lower is better)
Translates to: CFQLFHQWKSGFSGKVQPHLWQG*CLFGYL
Trigger: GAGATAGCCAAAAAGACACAAGCCCTGCCAAAGATG...TGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp GGCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCTTGTCAGAGACCAGTaGAGACAGAAAACCTCCAAC +
Preference number: 5 (lower is better)
Translates to: GLCFQLFHQWKSGFSGKVLVRDQ*RQKTSN
Trigger: GTTGGAGGTTTTCTGTCTCAACTGGTCTCTGACAAG...CACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GCTTGCTGCATAGTGGCCAGCACGGATACATTCAGTCAGAGGCTTGTCAGAGACTCTTTCTTCCTCAGTTaGCTGTACACAGGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: ACCIVASTDTFSQRLVRDSFFLS*LYTGKR
Trigger: TCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGA...GTCTCTGACAAGCCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673310.1
CDS-3UTR CAA 90 bp GTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCCTTGTCAGAGACCAGTaGAGACAGAAAACCTGTAGT +
Preference number: 5 (lower is better)
Translates to: VFSALPSVEVWLLRKGAALVRDQ*RQKTCS
Trigger: ACTACAGGTTTTCTGTCTCAACTGGTCTCTGACAAG...GGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541550.6
CDS-3UTR CAA 90 bp TTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCTTGTCAGAGACCAGTaGAGACAGAAAACCTCAAAG +
Preference number: 5 (lower is better)
Translates to: FQLFHQWKSGFSGKVQPVLVRDQ*RQKTSK
Trigger: CTTTGAGGTTTTCTGTCTCAACTGGTCTCTGACAAG...GACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672604.1
CDS-3UTR CAA 90 bp TTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCTGCTTTGTGTGGCTGTaGAATCATCCACCCTGTAAT +
Preference number: 5 (lower is better)
Translates to: FQLFHQWKSGFSGKVQPVCFVWL*NHPPCN
Trigger: ATTACAGGGTGGATGATTCAACAGCCACACAAAGCA...GACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672920.1
CDS-3UTR CAA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCGTCTTCAGCCAAGATTaGGTCATTTGGTTTCAGAGA +
Preference number: 5 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSVFSQD*VIWFQR
Trigger: TCTCTGAAACCAAATGACCAAATCTTGGCTGAAGAC...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp AGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCTCATCAAACAGTTCCTaGTGTTTGTCTTCAGCCAAG +
Preference number: 5 (lower is better)
Translates to: RKGAASPSNYDACCIVASSSNSS*CLSSAK
Trigger: CTTGGCTGAAGACAAACACAAGGAACTGTTTGATGA...GCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCTCATCAAACAGTTCCTaGTGTTTGTCTTCAGCCAAG +
Preference number: 5 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSSSNSS*CLSSAK
Trigger: CTTGGCTGAAGACAAACACAAGGAACTGTTTGATGA...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672429.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp TGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATACATCTTTGGCAGGGCTaGTGTCTTTTTGGCTATCTC +
Preference number: 5 (lower is better)
Translates to: WLLRKGAASPSNYDACCIHLWQG*CLFGYL
Trigger: GAGATAGCCAAAAAGACACAAGCCCTGCCAAAGATG...TATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCTCTTTGAGTTCATCTTaGGCAGGGCTTGTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFSLSSS*AGLVSF
Trigger: AAAAGACACAAGCCCTGCCAAAGATGAACTCAAAGA...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR CAA 90 bp CTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAAATTTCTTTCTGGTCTaGATCCAAGACAGCAAAAGC +
Preference number: 5 (lower is better)
Translates to: LFHQWKSGFSGKVQPVRLNFFLV*IQDSKS
Trigger: GCTTTTGCTGTCTTGGATCAAGACCAGAAAGAAATT...TAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATAATTTCTTTCTGGTCTaGATCCAAGACAGCAAAAGC +
Preference number: 5 (lower is better)
Translates to: GAASPSNYDACCIVASTDNFFLV*IQDSKS
Trigger: GCTTTTGCTGTCTTGGATCAAGACCAGAAAGAAATT...ATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATGCATCTCCAGCTCCATaGGTATCAATAATTTCTTTC +
Preference number: 5 (lower is better)
Translates to: GAASPSNYDACCIVASTDASPAP*VSIISF
Trigger: GAAAGAAATTATTGATACCAATGGAGCTGGAGATGC...ATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp TTCTGTAGCCATTATAGTGTCATCTCTCCCTTGGGTGAAGATCACGATTCGCTGTCTGCACTCCTGGGCTaGTGTTTTCAGCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: FCSHYSVISPLGEDHDSLSALLG*CFQLFH
Trigger: ATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGA...CAGCGAATCGTGATCTTCACCCAAGGGAGAGATGACACTATAATGGCTACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACATTTTCTCTCAGCGCTaGCGGCGCCTCCACCTTCAG +
Preference number: 5 (lower is better)
Translates to: FFFINMGILRKQLGQCLHIFSQR*RRLHLQ
Trigger: CTGAAGGTGGAGGCGCCGCAAGCGCTGAGAGAAAAT...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000539909.6
ENST00000672429.1
ENST00000673352.1
CDS-3UTR CAA 90 bp CAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGGTCTTCAGCCAAGATTaGGTCATTTGGTTTCAGAGA +
Preference number: 5 (lower is better)
Translates to: QWKSGFSGKVQPVRLIMMVFSQD*VIWFQR
Trigger: TCTCTGAAACCAAATGACCAAATCTTGGCTGAAGAC...CATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GGCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGAACAGTTCCTTGTGTTaGTCTTCAGCCAAGATTTGG +
Preference number: 5 (lower is better)
Translates to: GLCFQLFHQWKSGFSGKVNSSLC*SSAKIW
Trigger: CCAAATCTTGGCTGAAGACAAACACAAGGAACTGTT...CACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCTCATCAAACAGTTCCTaGTGTTTGTCTTCAGCCAAG +
Preference number: 5 (lower is better)
Translates to: ACVFSSSISGSLASQERCSSNSS*CLSSAK
Trigger: CTTGGCTGAAGACAAACACAAGGAACTGTTTGATGA...GCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTCATCAAACAGTTCCTaGTGTTTGTCTTCAGCCAAG +
Preference number: 5 (lower is better)
Translates to: VEVWLLRKGAASPSNYDASSNSS*CLSSAK
Trigger: CTTGGCTGAAGACAAACACAAGGAACTGTTTGATGA...AGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCAGGGCTTGTGTCTTTTaGGCTATCTCTTTAATGTCT +
Preference number: 5 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSRACVF*AISLMS
Trigger: AGACATTAAAGAGATAGCCAAAAAGACACAAGCCCT...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR CAA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCAGGGCTTGTGTCTTTTaGGCTATCTCTTTAATGTCT +
Preference number: 5 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFRACVF*AISLMS
Trigger: AGACATTAAAGAGATAGCCAAAAAGACACAAGCCCT...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR CAA 90 bp TTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGGGCTTGTGTCTTTTaGGCTATCTCTTTAATGTCT +
Preference number: 5 (lower is better)
Translates to: LGQCLHSWACVFSSSISGRACVF*AISLMS
Trigger: AGACATTAAAGAGATAGCCAAAAAGACACAAGCCCT...TCCACTGATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp AGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGCATAGTGGCCAGCAGGGCTTGTGTCTTTTaGGCTATCTCTTTAATGTCT +
Preference number: 5 (lower is better)
Translates to: RKGAASPSNYDACCIVASRACVF*AISLMS
Trigger: AGACATTAAAGAGATAGCCAAAAAGACACAAGCCCT...GCTGGCCACTATGCAGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp TTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTTCTTTGAGTTCATCTTaGGCAGGGCTTGTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: FHQWKSGFSGKVQPVRLISLSSS*AGLVSF
Trigger: AAAAGACACAAGCCCTGCCAAAGATGAACTCAAAGA...AATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp CATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGTCTTTGAGTTCATCTTaGGCAGGGCTTGTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: HQWKSGFSGKVQPVRLIMSLSSS*AGLVSF
Trigger: AAAAGACACAAGCCCTGCCAAAGATGAACTCAAAGA...CATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp AAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCATCTCTTTGAGTTCATCTTaGGCAGGGCTTGTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: KQLGQCLHSWACVFSSSISLSSS*AGLVSF
Trigger: AAAAGACACAAGCCCTGCCAAAGATGAACTCAAAGA...GATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp TTTCTGGTCTTGATCCAAGACAGCAAAAGCAGTGACTTCACTTTCTGTAGCCATCGATTCGCTGCCTCTTaGAGTTCATCTTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: FLVLIQDSKSSDFTFCSHRFAAS*SSSLAG
Trigger: CCCTGCCAAAGATGAACTCAAAGAGGCAGCGAATCG...ATGGCTACAGAAAGTGAAGTCACTGCTTTTGCTGTCTTGGATCAAGACCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCAATTTCTTTCTGGTCTaGATCCAAGACAGCAAAAGC +
Preference number: 5 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSNFFLV*IQDSKS
Trigger: GCTTTTGCTGTCTTGGATCAAGACCAGAAAGAAATT...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCAATTTCTTTCTGGTCTaGATCCAAGACAGCAAAAGC +
Preference number: 5 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFNFFLV*IQDSKS
Trigger: GCTTTTGCTGTCTTGGATCAAGACCAGAAAGAAATT...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp CAGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCGCATCTCCAGCTCCATaGGTATCAATAATTTCTTTC +
Preference number: 5 (lower is better)
Translates to: QEAIRAVSALLGLCFQLFASPAP*VSIISF
Trigger: GAAAGAAATTATTGATACCAATGGAGCTGGAGATGC...GAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp AGGAAGCAATTAGGGCAGTGTCTGCACTCCTGGGCTTGTGTTTTCAGCTCTTCCGCATCTCCAGCTCCATaGGTATCAATAATTTCTTTC +
Preference number: 5 (lower is better)
Translates to: RKQLGQCLHSWACVFSSSASPAP*VSIISF
Trigger: GAAAGAAATTATTGATACCAATGGAGCTGGAGATGC...GGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGACACTGCCCTAATTGCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GGCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGTCTTTCTTCCTCAGTTaGCTGTACACAGGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: GLCFQLFHQWKSGFSGKVSFFLS*LYTGKR
Trigger: TCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGA...CACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673310.1
ENST00000673352.1
CDS TCA 90 bp GAGTTCTTGTCCAGTATCCAAGAAGAAGGAAGTGATGCAGACACTTaGAGGATGGTGAAGGTGGAGAATTTTACTGAGCGGTGGAAATGG +
Preference number: 5 (lower is better)
Translates to: EFLSSIQEEGSDADT*RMVKVENFTERWKW
Trigger: CCATTTCCACCGCTCAGTAAAATTCTCCACCTTCACCATCCTTCAAGTGTCTGCATCACTTCCTTCTTCTTGGATACTGGACAAGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672394.1
CDS-3UTR CAA 90 bp GGCCCAGTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAATCCACCTTCAGCTTTTaGGGCTTCGGCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GPVLNNDLSSSVCCTQGKSTFSF*GFGSSS
Trigger: TGAGGAGGAGCCGAAGCCCAAAAAGCTGAAGGTGGA...TTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATACTGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539909.6
ENST00000673352.1
CDS-3UTR CAA 90 bp AAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCTGTCTTCAGCCAAGATTaGGTCATTTGGTTTCAGAGA +
Preference number: 5 (lower is better)
Translates to: KSGFSGKVQPVRLIMMLAVFSQD*VIWFQR
Trigger: TCTCTGAAACCAAATGACCAAATCTTGGCTGAAGAC...AGCAAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp CTGCTCGTAGTAATGAGCATCCACATGGGCTTCAGCAGCTTTTCTCTTCAGGATTCATCAAACAGTTCCTaGTGTTTGTCTTCAGCCAAG +
Preference number: 5 (lower is better)
Translates to: LLVVMSIHMGFSSFSLQDSSNSS*CLSSAK
Trigger: CTTGGCTGAAGACAAACACAAGGAACTGTTTGATGA...ATCCTGAAGAGAAAAGCTGCTGAAGCCCATGTGGATGCTCATTACTACGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672920.1
CDS-3UTR CAA 90 bp TCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACATTCAGTCAGAGGTTTAGTCTCAAAGCCTaGCTCTCTAGCAAAAGTGGC +
Preference number: 5 (lower is better)
Translates to: SNYDACCIVASTDTFSQRFSLKA*LSSKSG
Trigger: GCCACTTTTGCTAGAGAGCAAGGCTTTGAGACTAAA...CCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp TTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTAGGGCTTGTGTCTTTTaGGCTATCTCTTTAATGTCT +
Preference number: 5 (lower is better)
Translates to: FHQWKSGFSGKVQPVRLIRACVF*AISLMS
Trigger: AGACATTAAAGAGATAGCCAAAAAGACACAAGCCCT...AATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp CAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGAATTTCTTTCTGGTCTaGATCCAAGACAGCAAAAGC +
Preference number: 5 (lower is better)
Translates to: QWKSGFSGKVQPVRLIMMNFFLV*IQDSKS
Trigger: GCTTTTGCTGTCTTGGATCAAGACCAGAAAGAAATT...CATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAATTTCTTTCTGGTCTaGATCCAAGACAGCAAAAGC +
Preference number: 5 (lower is better)
Translates to: ACVFSSSISGSLASQERCNFFLV*IQDSKS
Trigger: GCTTTTGCTGTCTTGGATCAAGACCAGAAAGAAATT...GCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp TTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTAATTTCTTTCTGGTCTaGATCCAAGACAGCAAAAGC +
Preference number: 5 (lower is better)
Translates to: FSALPSVEVWLLRKGAASNFFLV*IQDSKS
Trigger: GCTTTTGCTGTCTTGGATCAAGACCAGAAAGAAATT...ACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp CATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGGCATCTCCAGCTCCATaGGTATCAATAATTTCTTTC +
Preference number: 5 (lower is better)
Translates to: HQWKSGFSGKVQPVRLIMASPAP*VSIISF
Trigger: GAAAGAAATTATTGATACCAATGGAGCTGGAGATGC...CATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp CAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGGCATCTCCAGCTCCATaGGTATCAATAATTTCTTTC +
Preference number: 5 (lower is better)
Translates to: QWKSGFSGKVQPVRLIMMASPAP*VSIISF
Trigger: GAAAGAAATTATTGATACCAATGGAGCTGGAGATGC...CATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp TCTAATTATGATGCTTGCTGCATAGTGGCCAGCACGGATACATTCAGTCAGAGGGTCTTCAGCCAAGATTaGGTCATTTGGTTTCAGAGA +
Preference number: 5 (lower is better)
Translates to: SNYDACCIVASTDTFSQRVFSQD*VIWFQR
Trigger: TCTCTGAAACCAAATGACCAAATCTTGGCTGAAGAC...CCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCAAGCATCATAATTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286621.7
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp CATTCTGCTCGTAGTAATGAGCATCCACATGGGCTTCAGCAGCTTTTCTCTTCAAACAGTTCCTTGTGTTaGTCTTCAGCCAAGATTTGG +
Preference number: 5 (lower is better)
Translates to: HSARSNEHPHGLQQLFSSNSSLC*SSAKIW
Trigger: CCAAATCTTGGCTGAAGACAAACACAAGGAACTGTT...TGAAGAGAAAAGCTGCTGAAGCCCATGTGGATGCTCATTACTACGAGCAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672920.1
CDS-3UTR CAA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACCAGCACAAGTTCCTGTaGGCTGCTCATTCTGCTCGT +
Preference number: 5 (lower is better)
Translates to: FFFINMGILRKQLGQCLHQHKFL*AAHSAR
Trigger: ACGAGCAGAATGAGCAGCCAACAGGAACTTGTGCTG...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACGCTATGAGGGACCTGTaGTCACCAGTGATGCATGCA +
Preference number: 5 (lower is better)
Translates to: FFFINMGILRKQLGQCLHAMRDL*SPVMHA
Trigger: TGCATGCATCACTGGTGACAACAGGTCCCTCATAGC...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACCGATTCGCTGCCTCTTaGAGTTCATCTTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: FFFINMGILRKQLGQCLHRFAAS*SSSLAG
Trigger: CCCTGCCAAAGATGAACTCAAAGAGGCAGCGAATCG...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR CAA 90 bp TGGAAGTCTGGCTTCTCAGGAAAGGTGCAGCCAGTCCGTCTAATTATGATGCTTGCATCTCCAGCTCCATaGGTATCAATAATTTCTTTC +
Preference number: 5 (lower is better)
Translates to: WKSGFSGKVQPVRLIMMLASPAP*VSIISF
Trigger: GAAAGAAATTATTGATACCAATGGAGCTGGAGATGC...AAGCATCATAATTAGACGGACTGGCTGCACCTTTCCTGAGAAGCCAGACTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000541550.6
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GCTTGTGTTTTCAGCTCTTCCATCAGTGGAAGTCTGGCTTCTCAGGAAAGGTGCCTCAGATGTGGTAAGTaGTCTCATTTCCAAAAAGTA +
Preference number: 5 (lower is better)
Translates to: ACVFSSSISGSLASQERCLRCGK*SHFQKV
Trigger: TACTTTTTGGAAATGAGACAACTTACCACATCTGAG...GCACCTTTCCTGAGAAGCCAGACTTCCACTGATGGAAGAGCTGAAAACACAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673310.1
CDS-3UTR CAA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACTGCTTTGTGTGGCTGTaGAATCATCCACTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: FFFINMGILRKQLGQCLHCFVWL*NHPLSH
Trigger: GTGGCTCAGTGGATGATTCAACAGCCACACAAAGCA...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672604.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GGCCCAGTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAAGTGTCATCTCTCCCTaGGGTGAAGATCACGATTCG +
Preference number: 5 (lower is better)
Translates to: GPVLNNDLSSSVCCTQGKSVISP*GEDHDS
Trigger: CGAATCGTGATCTTCACCCAAGGGAGAGATGACACT...TTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATACTGGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
CDS-3UTR CAA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACAGTGTCATCTCTCCCTaGGGTGAAGATCACGATTCG +
Preference number: 5 (lower is better)
Translates to: FFFINMGILRKQLGQCLHSVISP*GEDHDS
Trigger: CGAATCGTGATCTTCACCCAAGGGAGAGATGACACT...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR CAA 90 bp GGCCCAGTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAACATCTTTGGCAGGGCTaGTGTCTTTTTGGCTATCTC +
Preference number: 5 (lower is better)
Translates to: GPVLNNDLSSSVCCTQGKHLWQG*CLFGYL
Trigger: GAGATAGCCAAAAAGACACAAGCCCTGCCAAAGATG...TTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATACTGGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
CDS-3UTR CAA 90 bp GGCCCAGTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAACTTGTCAGAGACCAGTaGAGACAGAAAACCTCCAAC +
Preference number: 5 (lower is better)
Translates to: GPVLNNDLSSSVCCTQGKLVRDQ*RQKTSN
Trigger: GTTGGAGGTTTTCTGTCTCAACTGGTCTCTGACAAG...TTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATACTGGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp ATCCAAGACAGCAAAAGCAGTGACTTCACTTTCTGTAGCCATTATAGTGTCATCGTCTTCAGCCAAGATTaGGTCATTTGGTTTCAGAGA +
Preference number: 5 (lower is better)
Translates to: IQDSKSSDFTFCSHYSVIVFSQD*VIWFQR
Trigger: TCTCTGAAACCAAATGACCAAATCTTGGCTGAAGAC...GATGACACTATAATGGCTACAGAAAGTGAAGTCACTGCTTTTGCTGTCTTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACTTTAGTCTCAAAGCCTaGCTCTCTAGCAAAAGTGGC +
Preference number: 5 (lower is better)
Translates to: FFFINMGILRKQLGQCLHFSLKA*LSSKSG
Trigger: GCCACTTTTGCTAGAGAGCAAGGCTTTGAGACTAAA...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR CAA 90 bp TTTCTGGTCTTGATCCAAGACAGCAAAAGCAGTGACTTCACTTTCTGTAGCCATGCATCTCCAGCTCCATaGGTATCAATAATTTCTTTC +
Preference number: 5 (lower is better)
Translates to: FLVLIQDSKSSDFTFCSHASPAP*VSIISF
Trigger: GAAAGAAATTATTGATACCAATGGAGCTGGAGATGC...ATGGCTACAGAAAGTGAAGTCACTGCTTTTGCTGTCTTGGATCAAGACCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp GTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAGACAGATCTGCACTCCTGGGCTaGTGTTTTCAGCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: VLNNDLSSSVCCTQGKDRSALLG*CFQLFH
Trigger: ATGGAAGAGCTGAAAACACAAGCCCAGGAGTGCAGA...TCTGTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
ENST00000673352.1
CDS TCA 90 bp AATGCATCTCCAGCTCCATTGGTATCAATAATTTCTTTCTGGTCTTaGTCCAAGACAGCAAAAGCAGTGACTTCACTTTCTCAAAGCCTT +
Preference number: 5 (lower is better)
Translates to: NASPAPLVSIISFWS*SKTAKAVTSLSQSL
Trigger: AAGGCTTTGAGAAAGTGAAGTCACTGCTTTTGCTGTCTTGGATCAAGACCAGAAAGAAATTATTGATACCAATGGAGCTGGAGATGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673352.1
CDS-3UTR CAA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACGTCTTCAGCCAAGATTaGGTCATTTGGTTTCAGAGA +
Preference number: 5 (lower is better)
Translates to: FFFINMGILRKQLGQCLHVFSQD*VIWFQR
Trigger: TCTCTGAAACCAAATGACCAAATCTTGGCTGAAGAC...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACAACAGTTCCTTGTGTTaGTCTTCAGCCAAGATTTGG +
Preference number: 5 (lower is better)
Translates to: FFFINMGILRKQLGQCLHNSSLC*SSAKIW
Trigger: CCAAATCTTGGCTGAAGACAAACACAAGGAACTGTT...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672429.1
ENST00000672920.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp AATTTCTTTCTGGTCTTGATCCAAGACAGCAAAAGCAGTGACTTCACTTTCTGTAACAGTTCCTTGTGTTaGTCTTCAGCCAAGATTTGG +
Preference number: 5 (lower is better)
Translates to: NFFLVLIQDSKSSDFTFCNSSLC*SSAKIW
Trigger: CCAAATCTTGGCTGAAGACAAACACAAGGAACTGTT...ACAGAAAGTGAAGTCACTGCTTTTGCTGTCTTGGATCAAGACCAGAAAGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS-3UTR CAA 90 bp GGCCCAGTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAATCATCAAACAGTTCCTaGTGTTTGTCTTCAGCCAAG +
Preference number: 5 (lower is better)
Translates to: GPVLNNDLSSSVCCTQGKSSNSS*CLSSAK
Trigger: CTTGGCTGAAGACAAACACAAGGAACTGTTTGATGA...TTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATACTGGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACTCTTTGAGTTCATCTTaGGCAGGGCTTGTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: FFFINMGILRKQLGQCLHSLSSS*AGLVSF
Trigger: AAAAGACACAAGCCCTGCCAAAGATGAACTCAAAGA...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR CAA 90 bp GGCCCAGTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAATCTTTCTTCCTCAGTTaGCTGTACACAGGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: GPVLNNDLSSSVCCTQGKSFFLS*LYTGKR
Trigger: TCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGA...TTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATACTGGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAGACAGATTTAGTCTCAAAGCCTaGCTCTCTAGCAAAAGTGGC +
Preference number: 5 (lower is better)
Translates to: VLNNDLSSSVCCTQGKDRFSLKA*LSSKSG
Trigger: GCCACTTTTGCTAGAGAGCAAGGCTTTGAGACTAAA...TCTGTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
CDS-3UTR CAA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACAGGGCTTGTGTCTTTTaGGCTATCTCTTTAATGTCT +
Preference number: 5 (lower is better)
Translates to: FFFINMGILRKQLGQCLHRACVF*AISLMS
Trigger: AGACATTAAAGAGATAGCCAAAAAGACACAAGCCCT...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS-3UTR CAA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACAATTTCTTTCTGGTCTaGATCCAAGACAGCAAAAGC +
Preference number: 5 (lower is better)
Translates to: FFFINMGILRKQLGQCLHNFFLV*IQDSKS
Trigger: GCTTTTGCTGTCTTGGATCAAGACCAGAAAGAAATT...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp TTCTTCTTTATTAATATGGGAATTCTCAGGAAGCAATTAGGGCAGTGTCTGCACGCATCTCCAGCTCCATaGGTATCAATAATTTCTTTC +
Preference number: 5 (lower is better)
Translates to: FFFINMGILRKQLGQCLHASPAP*VSIISF
Trigger: GAAAGAAATTATTGATACCAATGGAGCTGGAGATGC...GTGCAGACACTGCCCTAATTGCTTCCTGAGAATTCCCATATTAATAAAGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAGACAGAAACAGTTCCTTGTGTTaGTCTTCAGCCAAGATTTGG +
Preference number: 5 (lower is better)
Translates to: VLNNDLSSSVCCTQGKDRNSSLC*SSAKIW
Trigger: CCAAATCTTGGCTGAAGACAAACACAAGGAACTGTT...TCTGTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAGACAGATCATCAAACAGTTCCTaGTGTTTGTCTTCAGCCAAG +
Preference number: 5 (lower is better)
Translates to: VLNNDLSSSVCCTQGKDRSSNSS*CLSSAK
Trigger: CTTGGCTGAAGACAAACACAAGGAACTGTTTGATGA...TCTGTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAGACAGATCTTTGAGTTCATCTTaGGCAGGGCTTGTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: VLNNDLSSSVCCTQGKDRSLSSS*AGLVSF
Trigger: AAAAGACACAAGCCCTGCCAAAGATGAACTCAAAGA...TCTGTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
CDS-3UTR CAA 90 bp GTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAGACAGATCTTTCTTCCTCAGTTaGCTGTACACAGGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: VLNNDLSSSVCCTQGKDRSFFLS*LYTGKR
Trigger: TCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGA...TCTGTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
ENST00000673352.1
CDS-3UTR CAA 90 bp GTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAGACAGAAGGGCTTGTGTCTTTTaGGCTATCTCTTTAATGTCT +
Preference number: 5 (lower is better)
Translates to: VLNNDLSSSVCCTQGKDRRACVF*AISLMS
Trigger: AGACATTAAAGAGATAGCCAAAAAGACACAAGCCCT...TCTGTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
CDS-3UTR CAA 90 bp GTATTAAATAATGATCTTTCTTCCTCAGTTTGCTGTACACAGGGAAAAGACAGAGCATCTCCAGCTCCATaGGTATCAATAATTTCTTTC +
Preference number: 5 (lower is better)
Translates to: VLNNDLSSSVCCTQGKDRASPAP*VSIISF
Trigger: GAAAGAAATTATTGATACCAATGGAGCTGGAGATGC...TCTGTCTTTTCCCTGTGTACAGCAAACTGAGGAAGAAAGATCATTATTTAATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372734.5
ENST00000539909.6
ENST00000673310.1
ENST00000673352.1
CDS CCA 72 bp GGAGGGAAGGCGGGCGCTCCGCCCCGTGCGAAGGGCTaGAGATCGTCCCCAGACGCCGTGGGCCACCGCGTG +
Preference number: 6 (lower is better)
Translates to: GGKAGAPPRAKG*RSSPDAVGHRV
Trigger: CACGCGGTGGCCCACGGCGTCTGGGGACGATCTCCAGCCCTTCGCACGGGGCGGAGCGCCCGCCTTCCCTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS GCA 72 bp CGCCCTCCTGCCCAGCGCCACGGCGCCCGCGTCCGATaGTCTACGTCCGCTCGGGCAGCAGCAGGTACCACA +
Preference number: 6 (lower is better)
Translates to: RPPAQRHGARVR*STSARAAAGTT
Trigger: TGTGGTACCTGCTGCTGCCCGAGCGGACGTAGAGCATCGGACGCGGGCGCCGTGGCGCTGGGCAGGAGGGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372734.5
ENST00000541550.6
ENST00000672394.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS GCA 72 bp CGTGCTGATTGGAGGGAAGGCGGGCGCTCCGCCCCGTaGGAAGGGCTGGAGATCGTCCCCAGACGCCGTGGG +
Preference number: 6 (lower is better)
Translates to: RADWREGGRSAP*EGLEIVPRRRG
Trigger: CCCACGGCGTCTGGGGACGATCTCCAGCCCTTCGCACGGGGCGGAGCGCCCGCCTTCCCTCCAATCAGCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS CCA 72 bp CCCGTGCGAAGGGCTGGAGATCGTCCCCAGACGCCGTaGGCCACCGCGTGTCTCGTGCCAGCTCACTGGCGC +
Preference number: 6 (lower is better)
Translates to: PVRRAGDRPQTP*ATACLVPAHWR
Trigger: GCGCCAGTGAGCTGGCACGAGACACGCGGTGGCCCACGGCGTCTGGGGACGATCTCCAGCCCTTCGCACGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS CCA 72 bp CACAGCAACTGCTTCCCGGCTCAGGCACTCAGCGACTaGGAGCGCGTCCTCACACACCCCGCGCGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: HSNCFPAQALSD*ERVLTHPARGR
Trigger: CCGCCCGCGCGCGGGGTGTGTGAGGACGCGCTCCCAGTCGCTGAGTGCCTGAGCCGGGAAGCAGTTGCTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672394.1
ENST00000672920.1
ENST00000673310.1
CDS GCA 72 bp ATCGTCCCCAGACGCCGTGGGCCACCGCGTGTCTCGTaGCAGCTCACTGGCGCGCGGGCTAGCGAGATGACT +
Preference number: 6 (lower is better)
Translates to: IVPRRRGPPRVS*QLTGARASEMT
Trigger: AGTCATCTCGCTAGCCCGCGCGCCAGTGAGCTGGCACGAGACACGCGGTGGCCCACGGCGTCTGGGGACGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672920.1
ENST00000673310.1
CDS TCA 72 bp TCTCGTGCCAGCTCACTGGCGCGCGGGCTAGCGAGATaGCTAGCGGGCGCGGTGGCCATCTTGAGTCCTAGT +
Preference number: 6 (lower is better)
Translates to: SRASSLARGLAR*LAGAVAILSPS
Trigger: ACTAGGACTCAAGATGGCCACCGCGCCCGCTAGTCATCTCGCTAGCCCGCGCGCCAGTGAGCTGGCACGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673310.1
CDS CCA 72 bp GCCTCAGCGCTTGCGGCGCCTCCACCTTCAGCTTTTTaGGCTTCGGCTCCTCCTCAGCAGCTGCCATCTTCG +
Preference number: 6 (lower is better)
Translates to: ASALAAPPPSAF*ASAPPQQLPSS
Trigger: CGAAGATGGCAGCTGCTGAGGAGGAGCCGAAGCCCAAAAAGCTGAAGGTGGAGGCGCCGCAAGCGCTGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478611.2
CDS GCA 72 bp ATATTTTCTCTGACTGACGTCATGGCTTCGCCCTCCTaGCCAGCGCCACGGCGCCCGCGTCCGATGCTCTAC +
Preference number: 6 (lower is better)
Translates to: IFSLTDVMASPS*PAPRRPRPMLY
Trigger: GTAGAGCATCGGACGCGGGCGCCGTGGCGCTGGGCAGGAGGGCGAAGCCATGACGTCAGTCAGAGAAAATAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372734.5
ENST00000541550.6
ENST00000672394.1
ENST00000672920.1
ENST00000673027.1
ENST00000673310.1
CDS CCA 72 bp CTCTCAGCGCTTGCGGCGCCTCCACCTTCAGCTTTTTaGGCTTCGGCTCCTCCTCAGCAGCTGCCATCTTCG +
Preference number: 6 (lower is better)
Translates to: LSALAAPPPSAF*ASAPPQQLPSS
Trigger: CGAAGATGGCAGCTGCTGAGGAGGAGCCGAAGCCCAAAAAGCTGAAGGTGGAGGCGCCGCAAGCGCTGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000286621.7
ENST00000539909.6
ENST00000672429.1
ENST00000673352.1
CDS GCA 72 bp CTTCAGCTTTTTGGGCTTCGGCTCCTCCTCAGCAGCTaGCATCTTCGCGCTCCCACCCCACTTTGGCTCTAC +
Preference number: 6 (lower is better)
Translates to: LQLFGLRLLLSS*HLRAPTPLWLY
Trigger: GTAGAGCCAAAGTGGGGTGGGAGCGCGAAGATGGCAGCTGCTGAGGAGGAGCCGAAGCCCAAAAAGCTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286621.7
ENST00000478611.2
ENST00000539909.6
ENST00000672429.1
ENST00000673352.1
CDS TCA 72 bp CCCGAAAGTCTGGCAGAATCTCTCCTCTCTACCTACTaGGTCCGGGGCTTTACAGGCACAGGATGCGGGTGG +
Preference number: 6 (lower is better)
Translates to: PESLAESLLSTY*VRGFTGTGCGW
Trigger: CCACCCGCATCCTGTGCCTGTAAAGCCCCGGACTCAGTAGGTAGAGAGGAGAGATTCTGCCAGACTTTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672394.1
CDS TCA 72 bp GCTGGAGAGGGGACGGGAAGAGTAGGTGGTCTTCCCTaGAGTACAGCAGTAGTCTCTTCCCCGAAGTCAAGC +
Preference number: 6 (lower is better)
Translates to: AGEGTGRVGGLP*STAVVSSPKSS
Trigger: GCTTGACTTCGGGGAAGAGACTACTGCTGTACTTCAGGGAAGACCACCTACTCTTCCCGTCCCCTCTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672394.1
CDS TCA 72 bp CGGATACATTCAGTCAGAGGCTTGTCAGAGACCAGTTaGGACAGAAAACCTGTAGTCGCCAGCTACTTGGGA +
Preference number: 6 (lower is better)
Translates to: RIHSVRGLSETS*DRKPVVASYLG
Trigger: TCCCAAGTAGCTGGCGACTACAGGTTTTCTGTCTCAACTGGTCTCTGACAAGCCTCTGACTGAATGTATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541550.6
CDS TCA 72 bp AACATGGTGAGACCCCCATCTCTGAGCCACTTTAATTaGATTCTGGGTAGAGCCACCAGCATGATATTCGAC +
Preference number: 6 (lower is better)
Translates to: NMVRPPSLSHFN*ILGRATSMIFD
Trigger: GTCGAATATCATGCTGGTGGCTCTACCCAGAATTCAATTAAAGTGGCTCAGAGATGGGGGTCTCACCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672920.1
CDS CAA 72 bp AGTTCATCAAACCTGCACTCCGTGGGTTCTGAGTTCTaGTCCAGTATCCAAGAAGAAGGAAGTGATGCAGAC +
Preference number: 6 (lower is better)
Translates to: SSSNLHSVGSEF*SSIQEEGSDAD
Trigger: GTCTGCATCACTTCCTTCTTCTTGGATACTGGACAAGAACTCAGAACCCACGGAGTGCAGGTTTGATGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672394.1
CDS TCA 72 bp GTGTGGCTGTTGAATCATCCACTGAGCCACTTTAATTaGATTCTGGGTAGAGCCACCAGCATGATATTCGAC +
Preference number: 6 (lower is better)
Translates to: VWLLNHPLSHFN*ILGRATSMIFD
Trigger: GTCGAATATCATGCTGGTGGCTCTACCCAGAATTCAATTAAAGTGGCTCAGTGGATGATTCAACAGCCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000286621.7
ENST00000372734.5
ENST00000539909.6
ENST00000541550.6
ENST00000672394.1
ENST00000672429.1
ENST00000673027.1
ENST00000673310.1
ENST00000673352.1
CDS CCA 72 bp TTCAGCCACCTCCCAGTACATCCACTGTTAGCTGTTTaGAGTGTTTCTTCCTGGAACTTTTATATGCTTTTA +
Preference number: 6 (lower is better)
Translates to: FSHLPVHPLLAV*SVSSWNFYMLL
Trigger: TAAAAGCATATAAAAGTTCCAGGAAGAAACACTCCAAACAGCTAACAGTGGATGTACTGGGAGGTGGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286621.7
ENST00000661461.1
CDS GCA 72 bp TTAACATGCATACAAATCTCGTGGATCTTGTTAAAATaGAGGTTTGGCACTGCAGGTATCAGTGACCAAAAT +
Preference number: 6 (lower is better)
Translates to: LTCIQISWILLK*RFGTAGISDQN
Trigger: ATTTTGGTCACTGATACCTGCAGTGCCAAACCTGCATTTTAACAAGATCCACGAGATTTGTATGCATGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478611.2