RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADIPOR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000006831

Ensembl transcript IDs: ENST00000357103.5, ENST00000535774.1, ENST00000537545.1, ENST00000540974.1, ENST00000543456.1, ENST00000544470.1, ENST00000642176.1, ENST00000643427.1, ENST00000644988.1, ENST00000645126.2, ENST00000646614.1, ENST00000647197.1

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGAGCCACTGGGCCGTCACAAAGCCCACGAGGCTGTCAAAGTTTTaGGGCTCCTCTGGTACTGGCATCAGTAGCCAGCAGGGAGGCCCG +
Preference number: 1 (lower is better)
Translates to: QSHWAVTKPTRLSKF*GSSGTGISSQQGGP
Trigger: CGGGCCTCCCTGCTGGCTACTGATGCCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCTCGTGGGCTTTGTGACGGCCCAGTGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR GCA 90 bp CCAGATCCTTCCAGCTTTGGGGTGTGGGTGACTGCACCCAGAGGCTaGTACTTCTGTTGGTGTTGTGACAGGGCTGCACCTATACGCTGT +
Preference number: 1 (lower is better)
Translates to: PDPSSFGVWVTAPRG*YFCWCCDRAAPIRC
Trigger: ACAGCGTATAGGTGCAGCCCTGTCACAACACCAACAGAAGTAGCAGCCTCTGGGTGCAGTCACCCACACCCCAAAGCTGGAAGGATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CCA 90 bp TCCCCTCTACCTCAGGCCTCCCAAAGGGAGTGGTCATGTCACCACTaGGCTAGGGCTATACTCTCTGCCCCATTAGGGTCCAAGGTATGT +
Preference number: 1 (lower is better)
Translates to: SPLPQASQREWSCHH*ARAILSAPLGSKVC
Trigger: ACATACCTTGGACCCTAATGGGGCAGAGAGTATAGCCCTAGCCCAGTGGTGACATGACCACTCCCTTTGGGAGGCCTGAGGTAGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR TCA 90 bp GGTGTGGGTGACTGCACCCAGAGGCTGCTACTTCTGTTGGTGTTGTaGCAGGGCTGCACCTATACGCTGTATCCCAAAGTGCATGACCGA +
Preference number: 1 (lower is better)
Translates to: GVGDCTQRLLLLLVL*QGCTYTLYPKVHDR
Trigger: TCGGTCATGCACTTTGGGATACAGCGTATAGGTGCAGCCCTGTCACAACACCAACAGAAGTAGCAGCCTCTGGGTGCAGTCACCCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CCA 90 bp AAGGGTTTGTGCTATGTTGAACCAGATCCTTCCAGCTTTGGGGTGTaGGTGACTGCACCCAGAGGCTGCTACTTCTGTTGGTGTTGTGAC +
Preference number: 1 (lower is better)
Translates to: KGLCYVEPDPSSFGV*VTAPRGCYFCWCCD
Trigger: GTCACAACACCAACAGAAGTAGCAGCCTCTGGGTGCAGTCACCCACACCCCAAAGCTGGAAGGATCTGGTTCAACATAGCACAAACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR TCA 90 bp AGCCTTTATCTAACATCCTGTCACCCACTCATGTGCTGCTTCCACTaGGAAAACACATACCACTCCCCTCTACCTCAGGCCTCCCAAAGG +
Preference number: 1 (lower is better)
Translates to: SLYLTSCHPLMCCFH*ENTYHSPLPQASQR
Trigger: CCTTTGGGAGGCCTGAGGTAGAGGGGAGTGGTATGTGTTTTCTCAGTGGAAGCAGCACATGAGTGGGTGACAGGATGTTAGATAAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR GCA 90 bp TGTTGGTGTTGTGACAGGGCTGCACCTATACGCTGTATCCCAAAGTaGATGACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTGCT +
Preference number: 1 (lower is better)
Translates to: CWCCDRAAPIRCIPK*MTEEQVWLLIRAVA
Trigger: AGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCATGCACTTTGGGATACAGCGTATAGGTGCAGCCCTGTCACAACACCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CCA 90 bp GCAAGTCTGGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTAAGTaGGCTTCTGTCCAAATGGCCACTGTCCTGCTGGACTATGCTTTC +
Preference number: 1 (lower is better)
Translates to: ASLASDTCCCSQETK*ASVQMATVLLDYAF
Trigger: GAAAGCATAGTCCAGCAGGACAGTGGCCATTTGGACAGAAGCCCACTTAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR TCA 90 bp ATCCTTTCCCCACCACTTTCTCTGACACCGTATCAGGTAGGCCTGTaGCATGAGCCATCGTCTTGTACCTCACTCCCTGGCAATAACATA +
Preference number: 1 (lower is better)
Translates to: ILSPPLSLTPYQVGL*HEPSSCTSLPGNNI
Trigger: TATGTTATTGCCAGGGAGTGAGGTACAAGACGATGGCTCATGTCACAGGCCTACCTGATACGGTGTCAGAGAAAGTGGTGGGGAAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR GCA 90 bp AAAGTGCATGACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTaGTCCCAAGAAACTAAGTGGGCTTCTGTCCAAATGGCCACTGTC +
Preference number: 1 (lower is better)
Translates to: KVHDRRASLASDTCC*SQETKWASVQMATV
Trigger: GACAGTGGCCATTTGGACAGAAGCCCACTTAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCATGCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR GCA 90 bp TATCCCAAAGTGCATGACCGAAGAGCAAGTCTGGCTTCTGATACGTaGTGTTGCTCCCAAGAAACTAAGTGGGCTTCTGTCCAAATGGCC +
Preference number: 1 (lower is better)
Translates to: YPKVHDRRASLASDT*CCSQETKWASVQMA
Trigger: GGCCATTTGGACAGAAGCCCACTTAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCATGCACTTTGGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CCA 90 bp GCACCTATACGCTGTATCCCAAAGTGCATGACCGAAGAGCAAGTCTaGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTAAGTGGGCTT +
Preference number: 1 (lower is better)
Translates to: APIRCIPKCMTEEQV*LLIRAVAPKKLSGL
Trigger: AAGCCCACTTAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCATGCACTTTGGGATACAGCGTATAGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CCA 90 bp GTAGATGAGCTCAGGAGAAACCTGGACACGTCAGAATCTCATTTGTaGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCATTT +
Preference number: 1 (lower is better)
Translates to: VDELRRNLDTSESHL*LAPMPRTMSEKGPF
Trigger: AAATGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGATTCTGACGTGTCCAGGTTTCTCCTGAGCTCATCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CCA 90 bp ATGAGCTCAGGAGAAACCTGGACACGTCAGAATCTCATTTGTGGCTaGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCATTTCTAT +
Preference number: 1 (lower is better)
Translates to: MSSGETWTRQNLICG*LPCQELCQRKVHFY
Trigger: ATAGAAATGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGATTCTGACGTGTCCAGGTTTCTCCTGAGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR TCA 90 bp CTCATCTTTCCTAATCCAAAGGAAGGGTCTACCAATCTATGTAGATaGGCTCAGGAGAAACCTGGACACGTCAGAATCTCATTTGTGGCT +
Preference number: 1 (lower is better)
Translates to: LIFPNPKEGSTNLCR*AQEKPGHVRISFVA
Trigger: AGCCACAAATGAGATTCTGACGTGTCCAGGTTTCTCCTGAGCTCATCTACATAGATTGGTAGACCCTTCCTTTGGATTAGGAAAGATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR TCA 90 bp ATACCATTGTATTTAAAATGCCACACCACTCTTATCCCTGTAAAGTaGGGTTCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTA +
Preference number: 1 (lower is better)
Translates to: IPLYLKCHTTLIPVK*GSVSADNSVLQLAL
Trigger: TAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGAACCTCACTTTACAGGGATAAGAGTGGTGTGGCATTTTAAATACAATGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR GCA 90 bp CTGACTGCTGAGAGTAAGGCATTCAGGCGCCAACCTGGTGAGAGTTCTCAGCGAAGGGAGGCCCGCAAGTaGCGCAGGCCCTGGTTTAGG +
Preference number: 2 (lower is better)
Translates to: LTAESKAFRRQPGESSQRREARK*RRPWFR
Trigger: CCTAAACCAGGGCCTGCGGCACTTGCGGGCCTCCCT...TCGCTGAGAACTCTCACCAGGTTGGCGCCTGAATGCCTTACTCTCAGCAGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp AGGCCTCCCAAAGGGAGTGGTCATGTCACCACTGGGCTAGGGCTATACTCTCTGAAGTGCCGCAGGCCCTaGTTTAGGGTCATAGTCCCT +
Preference number: 2 (lower is better)
Translates to: RPPKGSGHVTTGLGLYSLKCRRP*FRVIVP
Trigger: AGGGACTATGACCCTAAACCAGGGCCTGCGGCACTT...CAGAGAGTATAGCCCTAGCCCAGTGGTGACATGACCACTCCCTTTGGGAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp CTGACTGCTGAGAGTAAGGCATTCAGGCGCCAACCTGGTGAGAGTTCTCAGCGAAAGTGCCGCAGGCCCTaGTTTAGGGTCATAGTCCCT +
Preference number: 2 (lower is better)
Translates to: LTAESKAFRRQPGESSQRKCRRP*FRVIVP
Trigger: AGGGACTATGACCCTAAACCAGGGCCTGCGGCACTT...TCGCTGAGAACTCTCACCAGGTTGGCGCCTGAATGCCTTACTCTCAGCAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp TCCAGAGCTCCACAGCAAGGATATGGAAAACTGTCCCATCCCTCTAATAAGACTACCACGCAGAGCCACTaGGCCGTCACAAAGCCCACG +
Preference number: 2 (lower is better)
Translates to: SRAPQQGYGKLSHPSNKTTTQSH*AVTKPT
Trigger: CGTGGGCTTTGTGACGGCCCAGTGGCTCTGCGTGGT...AGTCTTATTAGAGGGATGGGACAGTTTTCCATATCCTTGCTGTGGAGCTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp TCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGGCTGCCTCCCAAAGGGAGTaGTCATGTCACCACTGGGCT +
Preference number: 2 (lower is better)
Translates to: SVSADNSVLQLALRVLLAASQRE*SCHHWA
Trigger: AGCCCAGTGGTGACATGACCACTCCCTTTGGGAGGC...AGCCAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp CTGACTGCTGAGAGTAAGGCATTCAGGCGCCAACCTGGTGAGAGTTCTCAGCGAACCGAAGAGCAAGTCTaGCTTCTGATACGTGCTGTT +
Preference number: 2 (lower is better)
Translates to: LTAESKAFRRQPGESSQRTEEQV*LLIRAV
Trigger: AACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGT...TCGCTGAGAACTCTCACCAGGTTGGCGCCTGAATGCCTTACTCTCAGCAGTCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp GTCTTTTGCTCGGTCCACCTAGCACCTAGGACAGTGACCTTATCCAGAACCAAAAGGCTGTCAAAGTTTTaGGGCTCCTCTGGTACTGGC +
Preference number: 2 (lower is better)
Translates to: VFCSVHLAPRTVTLSRTKRLSKF*GSSGTG
Trigger: GCCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCT...TTTGGTTCTGGATAAGGTCACTGTCCTAGGTGCTAGGTGGACCGAGCAAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp TCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGGCTTCTAGAGCTCCTCCATaGCCTCCAGCACCCCTTTAC +
Preference number: 2 (lower is better)
Translates to: SVSADNSVLQLALRVLLASRAPP*PPAPLY
Trigger: GTAAAGGGGTGCTGGAGGCCATGGAGGAGCTCTAGA...AGCCAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR GCA 90 bp TCACTCCCTGGCAATAACATACCATTGTATTTAAAATGCCACACCACTCTTATCAGGGAGGCCCGCAAGTaGCGCAGGCCCTGGTTTAGG +
Preference number: 2 (lower is better)
Translates to: SLPGNNIPLYLKCHTTLIREARK*RRPWFR
Trigger: CCTAAACCAGGGCCTGCGGCACTTGCGGGCCTCCCT...GATAAGAGTGGTGTGGCATTTTAAATACAATGGTATGTTATTGCCAGGGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp ATGACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTAAGGCTGTCAAAGTTTTaGGGCTCCTCTGGTACTGGC +
Preference number: 2 (lower is better)
Translates to: MTEEQVWLLIRAVAPKKLRLSKF*GSSGTG
Trigger: GCCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCT...TAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR TCA 90 bp TTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCATGAACCAGATCCTTTCGGTAGGCCTGTGACATaGGCCATCGTCTTGTACCTC +
Preference number: 2 (lower is better)
Translates to: FWWFTYGPRSEFHEPDPFGRPVT*AIVLYL
Trigger: GAGGTACAAGACGATGGCTCATGTCACAGGCCTACC...GAAAGGATCTGGTTCATGGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR GCA 90 bp GGTTCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGTGTGGCTGGCTCCCATaGCAAGAACTATGTCAGAGA +
Preference number: 2 (lower is better)
Translates to: GSVSADNSVLQLALRVLLCGWLP*QELCQR
Trigger: TCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACA...CAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR GCA 90 bp CTGACTGCTGAGAGTAAGGCATTCAGGCGCCAACCTGGTGAGAGTTCTCAGCGATTTCCTAAGGGTTTGTaGTATGTTGAACCAGATCCT +
Preference number: 2 (lower is better)
Translates to: LTAESKAFRRQPGESSQRFPKGL*YVEPDP
Trigger: AGGATCTGGTTCAACATAGCACAAACCCTTAGGAAA...TCGCTGAGAACTCTCACCAGGTTGGCGCCTGAATGCCTTACTCTCAGCAGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp AGGAAGGGTCTACCAATCTATGTAGATGAGCTCAGGAGAAACCTGGACACGTCATGGTCATGTCACCACTaGGCTAGGGCTATACTCTCT +
Preference number: 2 (lower is better)
Translates to: RKGLPIYVDELRRNLDTSWSCHH*ARAILS
Trigger: AGAGAGTATAGCCCTAGCCCAGTGGTGACATGACCA...TGACGTGTCCAGGTTTCTCCTGAGCTCATCTACATAGATTGGTAGACCCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp ATGACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTATGGCCACTGTCCTGCTaGACTATGCTTTCTCAAAGG +
Preference number: 2 (lower is better)
Translates to: MTEEQVWLLIRAVAPKKLWPLSC*TMLSQR
Trigger: CCTTTGAGAAAGCATAGTCCAGCAGGACAGTGGCCA...TAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CAA 90 bp TATGTAGATGAGCTCAGGAGAAACCTGGACACGTCAGAATCTCATTaGTGGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCA +
Preference number: 2 (lower is better)
Translates to: YVDELRRNLDTSESH*WLAPMPRTMSEKGP
Trigger: TGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGATTCTGACGTGTCCAGGTTTCTCCTGAGCTCATCTACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR TCA 90 bp GGTTCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGATGTGCTGCTTCCACTaGGAAAACACATACCACTCC +
Preference number: 2 (lower is better)
Translates to: GSVSADNSVLQLALRVLLMCCFH*ENTYHS
Trigger: GGAGTGGTATGTGTTTTCTCAGTGGAAGCAGCACAT...CAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR TCA 90 bp ATGACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTAATGTGCTGCTTCCACTaGGAAAACACATACCACTCC +
Preference number: 2 (lower is better)
Translates to: MTEEQVWLLIRAVAPKKLMCCFH*ENTYHS
Trigger: GGAGTGGTATGTGTTTTCTCAGTGGAAGCAGCACAT...TAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp AGGCCTCCCAAAGGGAGTGGTCATGTCACCACTGGGCTAGGGCTATACTCTCTGAATTCAAACAGTGTGTaGTACTTGCATGTTTCATTC +
Preference number: 2 (lower is better)
Translates to: RPPKGSGHVTTGLGLYSLNSNSV*YLHVSF
Trigger: GAATGAAACATGCAAGTACCACACACTGTTTGAATT...CAGAGAGTATAGCCCTAGCCCAGTGGTGACATGACCACTCCCTTTGGGAGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp TCTCATTTGTGGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCATTTTGGTCATGTCACCACTaGGCTAGGGCTATACTCTCT +
Preference number: 2 (lower is better)
Translates to: SHLWLAPMPRTMSEKGPFWSCHH*ARAILS
Trigger: AGAGAGTATAGCCCTAGCCCAGTGGTGACATGACCA...AAATGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp GGTTCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGTCAGAATCTCATTTGTaGCTGGCTCCCATGCCAAGA +
Preference number: 2 (lower is better)
Translates to: GSVSADNSVLQLALRVLLSESHL*LAPMPR
Trigger: TCTTGGCATGGGAGCCAGCCACAAATGAGATTCTGA...CAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp GTCTTTTGCTCGGTCCACCTAGCACCTAGGACAGTGACCTTATCCAGAACCAAATTGGTGGTTCACCTATaGGCCAAGATCAGAATTCCA +
Preference number: 2 (lower is better)
Translates to: VFCSVHLAPRTVTLSRTKLVVHL*AKIRIP
Trigger: TGGAATTCTGATCTTGGCCCATAGGTGAACCACCAA...TTTGGTTCTGGATAAGGTCACTGTCCTAGGTGCTAGGTGGACCGAGCAAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR TCA 90 bp CTAAGACTCGAGCACTATTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCCTTATCCCTGTAAAGTaGGGTTCAGTGAGTGCTGAC +
Preference number: 2 (lower is better)
Translates to: LRLEHYFGGSPMGQDQNSLIPVK*GSVSAD
Trigger: GTCAGCACTCACTGAACCTCACTTTACAGGGATAAG...GGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAATAGTGCTCGAGTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp AGGAAGGGTCTACCAATCTATGTAGATGAGCTCAGGAGAAACCTGGACACGTCAAATCTCATTTGTGGCTaGCTCCCATGCCAAGAACTA +
Preference number: 2 (lower is better)
Translates to: RKGLPIYVDELRRNLDTSNLICG*LPCQEL
Trigger: TAGTTCTTGGCATGGGAGCCAGCCACAAATGAGATT...TGACGTGTCCAGGTTTCTCCTGAGCTCATCTACATAGATTGGTAGACCCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR GCA 90 bp ATGGAGTCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGATCAGAAGCCAGTTTaGCAAGGGTCTTGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: MESSQVFDDSNLRLEHYFDQKPV*QGSCRA
Trigger: GGCTCTGCAAGACCCTTGGCAAACTGGCTTCTGATC...AAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGACTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR GCA 90 bp ATGGAGTCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTTGTGGCTGGCTCCCATaGCAAGAACTATGTCAGAGA +
Preference number: 2 (lower is better)
Translates to: MESSQVFDDSNLRLEHYFCGWLP*QELCQR
Trigger: TCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACA...AAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGACTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CAA 90 bp TTTCTCCCAATTGATGCACTCCATCCTTTGAGGTATGATTTATTTTaGTTTTTCTCTTCTCAGTCATGTACCACGCAGAGCCACTGGGCC +
Preference number: 2 (lower is better)
Translates to: FLPIDALHPLRYDLF*FFSSQSCTTQSHWA
Trigger: GGCCCAGTGGCTCTGCGTGGTACATGACTGAGAAGAGAAAAACAAAAATAAATCATACCTCAAAGGATGGAGTGCATCAATTGGGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp CTTATTCAAGGAGAGCCGAGGTGTCTGTCACATCCAGGCTTACCAAGACAGTGTAATTCAAACAGTGTGTaGTACTTGCATGTTTCATTC +
Preference number: 2 (lower is better)
Translates to: LIQGEPRCLSHPGLPRQCNSNSV*YLHVSF
Trigger: GAATGAAACATGCAAGTACCACACACTGTTTGAATT...ACACTGTCTTGGTAAGCCTGGATGTGACAGACACCTCGGCTCTCCTTGAATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CAA 90 bp ACTGGATTACACATCAGTGATGTTAATTTCATTTTTCCTAAGGGTTaGTGCTATGTTGAACCAGATCCTTCCAGCTTTGGGGTGTGGGTG +
Preference number: 2 (lower is better)
Translates to: TGLHISDVNFIFPKG*CYVEPDPSSFGVWV
Trigger: CACCCACACCCCAAAGCTGGAAGGATCTGGTTCAACATAGCACAAACCCTTAGGAAAAATGAAATTAACATCACTGATGTGTAATCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR GCA 90 bp ATGACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTAACAGTGTGTGGTACTTaGATGTTTCATTCTATACAA +
Preference number: 2 (lower is better)
Translates to: MTEEQVWLLIRAVAPKKLTVCGT*MFHSIQ
Trigger: TTGTATAGAATGAAACATGCAAGTACCACACACTGT...TAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp CTAAGACTCGAGCACTATTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCCAAATAAATATGATATaGATCAGAAGCCAGTTTGCC +
Preference number: 2 (lower is better)
Translates to: LRLEHYFGGSPMGQDQNSQINMI*IRSQFA
Trigger: GGCAAACTGGCTTCTGATCCATATCATATTTATTTG...GGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAATAGTGCTCGAGTCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp TCACTCCCTGGCAATAACATACCATTGTATTTAAAATGCCACACCACTCTTATCAATCTCATTTGTGGCTaGCTCCCATGCCAAGAACTA +
Preference number: 2 (lower is better)
Translates to: SLPGNNIPLYLKCHTTLINLICG*LPCQEL
Trigger: TAGTTCTTGGCATGGGAGCCAGCCACAAATGAGATT...GATAAGAGTGGTGTGGCATTTTAAATACAATGGTATGTTATTGCCAGGGAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR GCA 90 bp TCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGGTGGTACAGTGTGTGGTACTTaGATGTTTCATTCTATACAA +
Preference number: 2 (lower is better)
Translates to: SSQVFDDSNLRLEHYFGGTVCGT*MFHSIQ
Trigger: TTGTATAGAATGAAACATGCAAGTACCACACACTGT...ACCACCAAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CCA 90 bp ATGGAGTCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTCAAATAAATATGATATaGATCAGAAGCCAGTTTGCC +
Preference number: 2 (lower is better)
Translates to: MESSQVFDDSNLRLEHYFQINMI*IRSQFA
Trigger: GGCAAACTGGCTTCTGATCCATATCATATTTATTTG...AAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGACTCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CCA 72 bp CCTCAGGCCTCCCAAAGGGAGTGGTCATGTCACCACTaGGCTAGGGCTATACTCTCTGCCCCATTAGGGTCC +
Preference number: 3 (lower is better)
Translates to: PQASQREWSCHH*ARAILSAPLGS
Trigger: GGACCCTAATGGGGCAGAGAGTATAGCCCTAGCCCAGTGGTGACATGACCACTCCCTTTGGGAGGCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR GCA 72 bp TCCAGCTTTGGGGTGTGGGTGACTGCACCCAGAGGCTaGTACTTCTGTTGGTGTTGTGACAGGGCTGCACCT +
Preference number: 3 (lower is better)
Translates to: SSFGVWVTAPRG*YFCWCCDRAAP
Trigger: AGGTGCAGCCCTGTCACAACACCAACAGAAGTAGCAGCCTCTGGGTGCAGTCACCCACACCCCAAAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CCA 72 bp TGGGCCGTCACAAAGCCCACGAGGCTGTCAAAGTTTTaGGGCTCCTCTGGTACTGGCATCAGTAGCCAGCAG +
Preference number: 3 (lower is better)
Translates to: WAVTKPTRLSKF*GSSGTGISSQQ
Trigger: CTGCTGGCTACTGATGCCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCTCGTGGGCTTTGTGACGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR TCA 72 bp CCACCACTTTCTCTGACACCGTATCAGGTAGGCCTGTaGCATGAGCCATCGTCTTGTACCTCACTCCCTGGC +
Preference number: 3 (lower is better)
Translates to: PPLSLTPYQVGL*HEPSSCTSLPG
Trigger: GCCAGGGAGTGAGGTACAAGACGATGGCTCATGTCACAGGCCTACCTGATACGGTGTCAGAGAAAGTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CCA 72 bp GTGTGGGTGACTGCACCCAGAGGCTGCTACTTCTGTTaGTGTTGTGACAGGGCTGCACCTATACGCTGTATC +
Preference number: 3 (lower is better)
Translates to: VWVTAPRGCYFC*CCDRAAPIRCI
Trigger: GATACAGCGTATAGGTGCAGCCCTGTCACAACACCAACAGAAGTAGCAGCCTCTGGGTGCAGTCACCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR TCA 72 bp GACTGCACCCAGAGGCTGCTACTTCTGTTGGTGTTGTaGCAGGGCTGCACCTATACGCTGTATCCCAAAGTG +
Preference number: 3 (lower is better)
Translates to: DCTQRLLLLLVL*QGCTYTLYPKV
Trigger: CACTTTGGGATACAGCGTATAGGTGCAGCCCTGTCACAACACCAACAGAAGTAGCAGCCTCTGGGTGCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CCA 72 bp TGCTATGTTGAACCAGATCCTTCCAGCTTTGGGGTGTaGGTGACTGCACCCAGAGGCTGCTACTTCTGTTGG +
Preference number: 3 (lower is better)
Translates to: CYVEPDPSSFGV*VTAPRGCYFCW
Trigger: CCAACAGAAGTAGCAGCCTCTGGGTGCAGTCACCCACACCCCAAAGCTGGAAGGATCTGGTTCAACATAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR TCA 72 bp CTAACATCCTGTCACCCACTCATGTGCTGCTTCCACTaGGAAAACACATACCACTCCCCTCTACCTCAGGCC +
Preference number: 3 (lower is better)
Translates to: LTSCHPLMCCFH*ENTYHSPLPQA
Trigger: GGCCTGAGGTAGAGGGGAGTGGTATGTGTTTTCTCAGTGGAAGCAGCACATGAGTGGGTGACAGGATGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR TCA 72 bp ATGTTGAACCAGATCCTTCCAGCTTTGGGGTGTGGGTaGCTGCACCCAGAGGCTGCTACTTCTGTTGGTGTT +
Preference number: 3 (lower is better)
Translates to: MLNQILPALGCG*LHPEAATSVGV
Trigger: AACACCAACAGAAGTAGCAGCCTCTGGGTGCAGTCACCCACACCCCAAAGCTGGAAGGATCTGGTTCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CCA 72 bp GCTTCTGATACGTGCTGTTGCTCCCAAGAAACTAAGTaGGCTTCTGTCCAAATGGCCACTGTCCTGCTGGAC +
Preference number: 3 (lower is better)
Translates to: ASDTCCCSQETK*ASVQMATVLLD
Trigger: GTCCAGCAGGACAGTGGCCATTTGGACAGAAGCCCACTTAGTTTCTTGGGAGCAACAGCACGTATCAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CAA 90 bp GTCTTTTGCTCGGTCCACCTAGCACCTAGGACAGTGACCTTATCCAGAACCAAAGAGGCTGTCAAAGTTTaGGGGCTCCTCTGGTACTGG +
Preference number: 3 (lower is better)
Translates to: VFCSVHLAPRTVTLSRTKEAVKV*GLLWYW
Trigger: CCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCTC...TTTGGTTCTGGATAAGGTCACTGTCCTAGGTGCTAGGTGGACCGAGCAAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CAA 90 bp CTTATTCAAGGAGAGCCGAGGTGTCTGTCACATCCAGGCTTACCAAGACAGTGTGAGGCTGTCAAAGTTTaGGGGCTCCTCTGGTACTGG +
Preference number: 3 (lower is better)
Translates to: LIQGEPRCLSHPGLPRQCEAVKV*GLLWYW
Trigger: CCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCTC...ACACTGTCTTGGTAAGCCTGGATGTGACAGACACCTCGGCTCTCCTTGAATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CAA 90 bp CTTATTCAAGGAGAGCCGAGGTGTCTGTCACATCCAGGCTTACCAAGACAGTGTAGTTTGCCAAGGGTCTaGCAGAGCCCGCAATCAGTA +
Preference number: 3 (lower is better)
Translates to: LIQGEPRCLSHPGLPRQCSLPRV*QSPQSV
Trigger: TACTGATTGCGGGCTCTGCAAGACCCTTGGCAAACT...ACACTGTCTTGGTAAGCCTGGATGTGACAGACACCTCGGCTCTCCTTGAATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CAA 90 bp GGTTCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGGGATCAGAAGCCAGTTaGCCAAGGGTCTTGCAGAGC +
Preference number: 3 (lower is better)
Translates to: GSVSADNSVLQLALRVLLGSEAS*PRVLQS
Trigger: GCTCTGCAAGACCCTTGGCAAACTGGCTTCTGATCC...CAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR GCA 72 bp GTGCATGACCGAAGAGCAAGTCTGGCTTCTGATACGTaGTGTTGCTCCCAAGAAACTAAGTGGGCTTCTGTC +
Preference number: 3 (lower is better)
Translates to: VHDRRASLASDT*CCSQETKWASV
Trigger: GACAGAAGCCCACTTAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCATGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR GCA 72 bp TGTGACAGGGCTGCACCTATACGCTGTATCCCAAAGTaGATGACCGAAGAGCAAGTCTGGCTTCTGATACGT +
Preference number: 3 (lower is better)
Translates to: CDRAAPIRCIPK*MTEEQVWLLIR
Trigger: ACGTATCAGAAGCCAGACTTGCTCTTCGGTCATGCACTTTGGGATACAGCGTATAGGTGCAGCCCTGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CAA 90 bp TCTCATTTGTGGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCATTTGGATCAGAAGCCAGTTaGCCAAGGGTCTTGCAGAGC +
Preference number: 3 (lower is better)
Translates to: SHLWLAPMPRTMSEKGPFGSEAS*PRVLQS
Trigger: GCTCTGCAAGACCCTTGGCAAACTGGCTTCTGATCC...AAATGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CAA 90 bp ATGACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTAACGTCAGAATCTCATTaGTGGCTGGCTCCCATGCCA +
Preference number: 3 (lower is better)
Translates to: MTEEQVWLLIRAVAPKKLTSESH*WLAPMP
Trigger: TGGCATGGGAGCCAGCCACAAATGAGATTCTGACGT...TAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR GCA 72 bp GACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTaGTCCCAAGAAACTAAGTGGGCTTCTGTCCAAATG +
Preference number: 3 (lower is better)
Translates to: DRRASLASDTCC*SQETKWASVQM
Trigger: CATTTGGACAGAAGCCCACTTAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CCA 72 bp GGAGAAACCTGGACACGTCAGAATCTCATTTGTGGCTaGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTC +
Preference number: 3 (lower is better)
Translates to: GETWTRQNLICG*LPCQELCQRKV
Trigger: GACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGATTCTGACGTGTCCAGGTTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CCA 72 bp GTTGCTCCCAAGAAACTAAGTGGGCTTCTGTCCAAATaGCCACTGTCCTGCTGGACTATGCTTTCTCAAAGG +
Preference number: 3 (lower is better)
Translates to: VAPKKLSGLLSK*PLSCWTMLSQR
Trigger: CCTTTGAGAAAGCATAGTCCAGCAGGACAGTGGCCATTTGGACAGAAGCCCACTTAGTTTCTTGGGAGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CCA 72 bp CGCTGTATCCCAAAGTGCATGACCGAAGAGCAAGTCTaGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTA +
Preference number: 3 (lower is better)
Translates to: RCIPKCMTEEQV*LLIRAVAPKKL
Trigger: TAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCATGCACTTTGGGATACAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CAA 90 bp AGGCCTCCCAAAGGGAGTGGTCATGTCACCACTGGGCTAGGGCTATACTCTCTGAACAGTGTGTGGTACTaGCATGTTTCATTCTATACA +
Preference number: 3 (lower is better)
Translates to: RPPKGSGHVTTGLGLYSLNSVWY*HVSFYT
Trigger: TGTATAGAATGAAACATGCAAGTACCACACACTGTT...CAGAGAGTATAGCCCTAGCCCAGTGGTGACATGACCACTCCCTTTGGGAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CAA 90 bp CTTATTCAAGGAGAGCCGAGGTGTCTGTCACATCCAGGCTTACCAAGACAGTGTCCTTTAGAAGGCATCTaGGTGCACCAAGACACTGTA +
Preference number: 3 (lower is better)
Translates to: LIQGEPRCLSHPGLPRQCPLEGI*VHQDTV
Trigger: TACAGTGTCTTGGTGCACCAAGATGCCTTCTAAAGG...ACACTGTCTTGGTAAGCCTGGATGTGACAGACACCTCGGCTCTCCTTGAATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CAA 90 bp ATGACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTAACCTTTTGCTGGAGATaGCAAGGGCAAGGGAGGAAA +
Preference number: 3 (lower is better)
Translates to: MTEEQVWLLIRAVAPKKLTFCWR*QGQGRK
Trigger: TTTCCTCCCTTGCCCTTGCAATCTCCAGCAAAAGGT...TAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CCA 72 bp CTCAGGAGAAACCTGGACACGTCAGAATCTCATTTGTaGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAA +
Preference number: 3 (lower is better)
Translates to: LRRNLDTSESHL*LAPMPRTMSEK
Trigger: TTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGATTCTGACGTGTCCAGGTTTCTCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CAA 90 bp TCCAGAGCTCCACAGCAAGGATATGGAAAACTGTCCCATCCCTCTAATAAGACTAGAATAAGCCAGGGTTaGGGCTATGTCTCCTTTTCT +
Preference number: 3 (lower is better)
Translates to: SRAPQQGYGKLSHPSNKTRISQG*GYVSFS
Trigger: AGAAAAGGAGACATAGCCCAAACCCTGGCTTATTCT...AGTCTTATTAGAGGGATGGGACAGTTTTCCATATCCTTGCTGTGGAGCTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR TCA 72 bp CCTAATCCAAAGGAAGGGTCTACCAATCTATGTAGATaGGCTCAGGAGAAACCTGGACACGTCAGAATCTCA +
Preference number: 3 (lower is better)
Translates to: PNPKEGSTNLCR*AQEKPGHVRIS
Trigger: TGAGATTCTGACGTGTCCAGGTTTCTCCTGAGCTCATCTACATAGATTGGTAGACCCTTCCTTTGGATTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CAA 90 bp TCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGGTGGTCCTTTAGAAGGCATCTaGGTGCACCAAGACACTGTA +
Preference number: 3 (lower is better)
Translates to: SSQVFDDSNLRLEHYFGGPLEGI*VHQDTV
Trigger: TACAGTGTCTTGGTGCACCAAGATGCCTTCTAAAGG...ACCACCAAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CAA 90 bp TCACTCCCTGGCAATAACATACCATTGTATTTAAAATGCCACACCACTCTTATCACGTCAGAATCTCATTaGTGGCTGGCTCCCATGCCA +
Preference number: 3 (lower is better)
Translates to: SLPGNNIPLYLKCHTTLITSESH*WLAPMP
Trigger: TGGCATGGGAGCCAGCCACAAATGAGATTCTGACGT...GATAAGAGTGGTGTGGCATTTTAAATACAATGGTATGTTATTGCCAGGGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR GCA 72 bp TCTACACTGGATTCTTTCTTCCTAGATCCCACCTTTTaGTGGAGATTGCAAGGGCAAGGGAGGAAAATAACT +
Preference number: 3 (lower is better)
Translates to: STLDSFFLDPTF*WRLQGQGRKIT
Trigger: AGTTATTTTCCTCCCTTGCCCTTGCAATCTCCAGCAAAAGGTGGGATCTAGGAAGAAAGAATCCAGTGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR TCA 72 bp AATACTGAAAAAGGCCACTATTTAATGGTGAAAGAATaGAGCTGTAGAGGTCCCAACCAGCCTAGGGCCAAA +
Preference number: 3 (lower is better)
Translates to: NTEKGHYLMVKE*SCRGPNQPRAK
Trigger: TTTGGCCCTAGGCTGGTTGGGACCTCTACAGCTTCATTCTTTCACCATTAAATAGTGGCCTTTTTCAGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR TCA 72 bp TATTTAAAATGCCACACCACTCTTATCCCTGTAAAGTaGGGTTCAGTGAGTGCTGACAACTCCGTACTACAA +
Preference number: 3 (lower is better)
Translates to: YLKCHTTLIPVK*GSVSADNSVLQ
Trigger: TTGTAGTACGGAGTTGTCAGCACTCACTGAACCTCACTTTACAGGGATAAGAGTGGTGTGGCATTTTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CCA 72 bp AAACTGTTTCGCCATCTTCTACAAATAAATATGATATaGATCAGAAGCCAGTTTGCCAAGGGTCTTGCAGAG +
Preference number: 3 (lower is better)
Translates to: KLFRHLLQINMI*IRSQFAKGLAE
Trigger: CTCTGCAAGACCCTTGGCAAACTGGCTTCTGATCCATATCATATTTATTTGTAGAAGATGGCGAAACAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR-3UTR CAA 90 bp TACAGTCACTTTTTGTGCAAAATTCAAACAGTGTGTGGTACTTGCATGTTTCATAGAATAAGCCAGGGTTaGGGCTATGTCTCCTTTTCT +
Preference number: 3 (lower is better)
Translates to: YSHFLCKIQTVCGTCMFHRISQG*GYVSFS
Trigger: AGAAAAGGAGACATAGCCCAAACCCTGGCTTATTCT...ATGAAACATGCAAGTACCACACACTGTTTGAATTTTGCACAAAAAGTGACTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp AGGCCTCCCAAAGGGAGTGGTCATGTCACCACTGGGCTAGGGCTATACTCTCTGGTGTCTCGGACTTCTTaGGAGCCACCGCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RPPKGSGHVTTGLGLYSLVSRTS*EPPLRG
Trigger: TCCCCTCAGCGGTGGCTCCCAAGAAGTCCGAGACAC...CAGAGAGTATAGCCCTAGCCCAGTGGTGACATGACCACTCCCTTTGGGAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp CCCACGAGGCTGTCAAAGTTTTGGGGCTCCTCTGGTACTGGCATCAGTAGCCAGTCTAGAGCTCCTCCATaGCCTCCAGCACCCCTTTAC +
Preference number: 4 (lower is better)
Translates to: PTRLSKFWGSSGTGISSQSRAPP*PPAPLY
Trigger: GTAAAGGGGTGCTGGAGGCCATGGAGGAGCTCTAGA...CTGGCTACTGATGCCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCTCGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp CCCACGAGGCTGTCAAAGTTTTGGGGCTCCTCTGGTACTGGCATCAGTAGCCAGGTATCCCAAAGTGCATaGCCGAAGAGCAAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: PTRLSKFWGSSGTGISSQVSQSA*PKSKSG
Trigger: GCCAGACTTGCTCTTCGGTCATGCACTTTGGGATAC...CTGGCTACTGATGCCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCTCGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp CTTATTCAAGGAGAGCCGAGGTGTCTGTCACATCCAGGCTTACCAAGACAGTGTGCTTTGGGGTGTGGGTaGCTGCACCCAGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LIQGEPRCLSHPGLPRQCALGCG*LHPEAA
Trigger: AGCAGCCTCTGGGTGCAGTCACCCACACCCCAAAGC...ACACTGTCTTGGTAAGCCTGGATGTGACAGACACCTCGGCTCTCCTTGAATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp GGTTCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGAGGGAGGCCCGCAAGTaGCGCAGGCCCTGGTTTAGG +
Preference number: 4 (lower is better)
Translates to: GSVSADNSVLQLALRVLLREARK*RRPWFR
Trigger: CCTAAACCAGGGCCTGCGGCACTTGCGGGCCTCCCT...CAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp AGGCCTCCCAAAGGGAGTGGTCATGTCACCACTGGGCTAGGGCTATACTCTCTGCCTTATATCTGGCTCTaGAGTCCTGCTGCACCCCAA +
Preference number: 4 (lower is better)
Translates to: RPPKGSGHVTTGLGLYSLPYIWL*SPAAPQ
Trigger: TTGGGGTGCAGCAGGACTCCAGAGCCAGATATAAGG...CAGAGAGTATAGCCCTAGCCCAGTGGTGACATGACCACTCCCTTTGGGAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp CCCACGAGGCTGTCAAAGTTTTGGGGCTCCTCTGGTACTGGCATCAGTAGCCAGAGGCTGTCAAAGTTTTaGGGCTCCTCTGGTACTGGC +
Preference number: 4 (lower is better)
Translates to: PTRLSKFWGSSGTGISSQRLSKF*GSSGTG
Trigger: GCCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCT...CTGGCTACTGATGCCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCTCGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp CCATTAGGGTCCAAGGTATGTCAGCCTTTAGAAGGCATCTTGGTGCACCAAGACCCGAGAGACCCCCTCTaGGTGGCAGTAGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: PLGSKVCQPLEGILVHQDPRDPL*VAVDCV
Trigger: CACACAGTCTACTGCCACTCAGAGGGGGTCTCTCGG...GTCTTGGTGCACCAAGATGCCTTCTAAAGGCTGACATACCTTGGACCCTAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp AGGCCTCCCAAAGGGAGTGGTCATGTCACCACTGGGCTAGGGCTATACTCTCTGTCCGGGGCTATCACCTaGTCCTACAGTCACTTTTTG +
Preference number: 4 (lower is better)
Translates to: RPPKGSGHVTTGLGLYSLSGAIT*SYSHFL
Trigger: CAAAAAGTGACTGTAGGATCAGGTGATAGCCCCGGA...CAGAGAGTATAGCCCTAGCCCAGTGGTGACATGACCACTCCCTTTGGGAGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp CCCACGAGGCTGTCAAAGTTTTGGGGCTCCTCTGGTACTGGCATCAGTAGCCAGTATCAGGTAGGCCTGTaGCATGAGCCATCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: PTRLSKFWGSSGTGISSQYQVGL*HEPSSC
Trigger: ACAAGACGATGGCTCATGTCACAGGCCTACCTGATA...CTGGCTACTGATGCCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCTCGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp CTGACTGCTGAGAGTAAGGCATTCAGGCGCCAACCTGGTGAGAGTTCTCAGCGAGAGCAAGCAAGCCTCTaGCTGCTGAGAGTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: LTAESKAFRRQPGESSQREQASL*LLRVRH
Trigger: ATGCCTTACTCTCAGCAGTCAGAGGCTTGCTTGCTC...TCGCTGAGAACTCTCACCAGGTTGGCGCCTGAATGCCTTACTCTCAGCAGTCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp ACCAAGACACTGTACATTCCGGGGCTATCACCTGATCCTACAGTCACTTTTTGTAGGGAGGCCCGCAAGTaGCGCAGGCCCTGGTTTAGG +
Preference number: 4 (lower is better)
Translates to: TKTLYIPGLSPDPTVTFCREARK*RRPWFR
Trigger: CCTAAACCAGGGCCTGCGGCACTTGCGGGCCTCCCT...ACAAAAAGTGACTGTAGGATCAGGTGATAGCCCCGGAATGTACAGTGTCTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp AGGCCTCCCAAAGGGAGTGGTCATGTCACCACTGGGCTAGGGCTATACTCTCTGTGTGGCTGGCTCCCATaGCAAGAACTATGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: RPPKGSGHVTTGLGLYSLCGWLP*QELCQR
Trigger: TCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACA...CAGAGAGTATAGCCCTAGCCCAGTGGTGACATGACCACTCCCTTTGGGAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp AGGCCTCCCAAAGGGAGTGGTCATGTCACCACTGGGCTAGGGCTATACTCTCTGACTGCACCCAGAGGCTaGTACTTCTGTTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: RPPKGSGHVTTGLGLYSLTAPRG*YFCWCC
Trigger: ACAACACCAACAGAAGTAGCAGCCTCTGGGTGCAGT...CAGAGAGTATAGCCCTAGCCCAGTGGTGACATGACCACTCCCTTTGGGAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp CCCACGAGGCTGTCAAAGTTTTGGGGCTCCTCTGGTACTGGCATCAGTAGCCAGACTGCACCCAGAGGCTaGTACTTCTGTTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: PTRLSKFWGSSGTGISSQTAPRG*YFCWCC
Trigger: ACAACACCAACAGAAGTAGCAGCCTCTGGGTGCAGT...CTGGCTACTGATGCCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCTCGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp CCCACGAGGCTGTCAAAGTTTTGGGGCTCCTCTGGTACTGGCATCAGTAGCCAGTCTGAGCCTTATATCTaGCTCTGGAGTCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PTRLSKFWGSSGTGISSQSEPYI*LWSPAA
Trigger: TGCAGCAGGACTCCAGAGCCAGATATAAGGCTCAGA...CTGGCTACTGATGCCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCTCGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp CCCACGAGGCTGTCAAAGTTTTGGGGCTCCTCTGGTACTGGCATCAGTAGCCAGTGGCCACTGTCCTGCTaGACTATGCTTTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: PTRLSKFWGSSGTGISSQWPLSC*TMLSQR
Trigger: CCTTTGAGAAAGCATAGTCCAGCAGGACAGTGGCCA...CTGGCTACTGATGCCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCTCGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp CCATTAGGGTCCAAGGTATGTCAGCCTTTAGAAGGCATCTTGGTGCACCAAGACTCCAGCTTTGGGGTGTaGGTGACTGCACCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PLGSKVCQPLEGILVHQDSSFGV*VTAPRG
Trigger: GCCTCTGGGTGCAGTCACCCACACCCCAAAGCTGGA...GTCTTGGTGCACCAAGATGCCTTCTAAAGGCTGACATACCTTGGACCCTAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp AGGCCTCCCAAAGGGAGTGGTCATGTCACCACTGGGCTAGGGCTATACTCTCTGACCGAAGAGCAAGTCTaGCTTCTGATACGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: RPPKGSGHVTTGLGLYSLTEEQV*LLIRAV
Trigger: AACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGT...CAGAGAGTATAGCCCTAGCCCAGTGGTGACATGACCACTCCCTTTGGGAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp ATGACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTATTCCCAAACACCTACTaGGGACGCCAGTCCCCATGC +
Preference number: 4 (lower is better)
Translates to: MTEEQVWLLIRAVAPKKLFPNTY*GRQSPC
Trigger: GCATGGGGACTGGCGTCCTCAGTAGGTGTTTGGGAA...TAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp TCCAGAGCTCCACAGCAAGGATATGGAAAACTGTCCCATCCCTCTAATAAGACTCAGGCGCCAACCTGGTaGGAGTTCTCAGCGAGCACT +
Preference number: 4 (lower is better)
Translates to: SRAPQQGYGKLSHPSNKTQAPTW*EFSAST
Trigger: AGTGCTCGCTGAGAACTCTCACCAGGTTGGCGCCTG...AGTCTTATTAGAGGGATGGGACAGTTTTCCATATCCTTGCTGTGGAGCTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGGCTTGGGGTGTGGGTGACTaGACCCAGAGGCTGCTACTT +
Preference number: 4 (lower is better)
Translates to: SVSADNSVLQLALRVLLAWGVGD*TQRLLL
Trigger: AAGTAGCAGCCTCTGGGTGCAGTCACCCACACCCCA...AGCCAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp CTAAGACTCGAGCACTATTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCTCCAGCTTTGGGGTGTaGGTGACTGCACCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LRLEHYFGGSPMGQDQNSSSFGV*VTAPRG
Trigger: GCCTCTGGGTGCAGTCACCCACACCCCAAAGCTGGA...GGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAATAGTGCTCGAGTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp GTCTTTTGCTCGGTCCACCTAGCACCTAGGACAGTGACCTTATCCAGAACCAAAAGATCCTTCCAGCTTTaGGGTGTGGGTGACTGCACC +
Preference number: 4 (lower is better)
Translates to: VFCSVHLAPRTVTLSRTKRSFQL*GVGDCT
Trigger: GGTGCAGTCACCCACACCCCAAAGCTGGAAGGATCT...TTTGGTTCTGGATAAGGTCACTGTCCTAGGTGCTAGGTGGACCGAGCAAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp CCCACGAGGCTGTCAAAGTTTTGGGGCTCCTCTGGTACTGGCATCAGTAGCCAGGAAATCCCACATCAATaGAACCATCACACAGATGCC +
Preference number: 4 (lower is better)
Translates to: PTRLSKFWGSSGTGISSQEIPHQ*NHHTDA
Trigger: GGCATCTGTGTGATGGTTCCATTGATGTGGGATTTC...CTGGCTACTGATGCCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCTCGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp CTGACTGCTGAGAGTAAGGCATTCAGGCGCCAACCTGGTGAGAGTTCTCAGCGAGGAAGTCATTATCCTTaGGCCAGTCTGGTAGTACAT +
Preference number: 4 (lower is better)
Translates to: LTAESKAFRRQPGESSQRGSHYP*ASLVVH
Trigger: ATGTACTACCAGACTGGCTCAAGGATAATGACTTCC...TCGCTGAGAACTCTCACCAGGTTGGCGCCTGAATGCCTTACTCTCAGCAGTCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp ACCAAGACACTGTACATTCCGGGGCTATCACCTGATCCTACAGTCACTTTTTGTACAGGGCAGCTCCTGTaGTGTAGAGGCTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: TKTLYIPGLSPDPTVTFCTGQLL*CRGWPS
Trigger: TGATGGCCAGCCTCTACATCACAGGAGCTGCCCTGT...ACAAAAAGTGACTGTAGGATCAGGTGATAGCCCCGGAATGTACAGTGTCTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp CTAAGACTCGAGCACTATTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCACAGGGCAGCTCCTGTaGTGTAGAGGCTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: LRLEHYFGGSPMGQDQNSTGQLL*CRGWPS
Trigger: TGATGGCCAGCCTCTACATCACAGGAGCTGCCCTGT...GGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAATAGTGCTCGAGTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp TCCAGAGCTCCACAGCAAGGATATGGAAAACTGTCCCATCCCTCTAATAAGACTAGCCCCCGCCGATCATaGAACGAAACTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SRAPQQGYGKLSHPSNKTSPRRS*NETPGG
Trigger: ACCTCCAGGAGTTTCGTTTCATGATCGGCGGGGGCT...AGTCTTATTAGAGGGATGGGACAGTTTTCCATATCCTTGCTGTGGAGCTCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp CTAAGACTCGAGCACTATTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCAGCCCCCGCCGATCATaGAACGAAACTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LRLEHYFGGSPMGQDQNSSPRRS*NETPGG
Trigger: ACCTCCAGGAGTTTCGTTTCATGATCGGCGGGGGCT...GGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAATAGTGCTCGAGTCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp AAGCCAGGGTTTGGGCTATGTCTCCTTTTCTCCCAATTGATGCACTCCATCCTTGGTAGGCCTGTGACATaGGCCATCGTCTTGTACCTC +
Preference number: 4 (lower is better)
Translates to: KPGFGLCLLFSQLMHSILGRPVT*AIVLYL
Trigger: GAGGTACAAGACGATGGCTCATGTCACAGGCCTACC...AAGGATGGAGTGCATCAATTGGGAGAAAAGGAGACATAGCCCAAACCCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp CCATTAGGGTCCAAGGTATGTCAGCCTTTAGAAGGCATCTTGGTGCACCAAGACAGCAAGTCTGGCTTCTaGTACGTGCTGTTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: PLGSKVCQPLEGILVHQDSKSGF*YVLLLP
Trigger: TGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCT...GTCTTGGTGCACCAAGATGCCTTCTAAAGGCTGACATACCTTGGACCCTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp TTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCATGAACCAGATCCTTTCCAGGCGCCAACCTGGTaGGAGTTCTCAGCGAGCACT +
Preference number: 4 (lower is better)
Translates to: FWWFTYGPRSEFHEPDPFQAPTW*EFSAST
Trigger: AGTGCTCGCTGAGAACTCTCACCAGGTTGGCGCCTG...GAAAGGATCTGGTTCATGGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGGCTGCTCTGGAGTCCTGCTaGACCCCAATCGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SVSADNSVLQLALRVLLAALESC*TPIGFL
Trigger: CAGAAAACCGATTGGGGTGCAGCAGGACTCCAGAGC...AGCCAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp ATGACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTAGCTCTGGAGTCCTGCTaGACCCCAATCGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: MTEEQVWLLIRAVAPKKLALESC*TPIGFL
Trigger: CAGAAAACCGATTGGGGTGCAGCAGGACTCCAGAGC...TAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp ATGACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTACTGGCTCTGGAGTCCTaGTGCACCCCAATCGGTTTT +
Preference number: 4 (lower is better)
Translates to: MTEEQVWLLIRAVAPKKLLALES*CTPIGF
Trigger: AAAACCGATTGGGGTGCAGCAGGACTCCAGAGCCAG...TAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp GTCTTTTGCTCGGTCCACCTAGCACCTAGGACAGTGACCTTATCCAGAACCAAAGGAGGCCGGTGTCCATaGAAGAGGAAGTCATTATCC +
Preference number: 4 (lower is better)
Translates to: VFCSVHLAPRTVTLSRTKGGRCP*KRKSLS
Trigger: GGATAATGACTTCCTCTTGCATGGACACCGGCCTCC...TTTGGTTCTGGATAAGGTCACTGTCCTAGGTGCTAGGTGGACCGAGCAAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp GTCTTTTGCTCGGTCCACCTAGCACCTAGGACAGTGACCTTATCCAGAACCAAAGGACGCCAGTCCCCATaGTCAGGACCTCCATATTTA +
Preference number: 4 (lower is better)
Translates to: VFCSVHLAPRTVTLSRTKGRQSP*SGPPYL
Trigger: TAAATATGGAGGTCCTGAGCATGGGGACTGGCGTCC...TTTGGTTCTGGATAAGGTCACTGTCCTAGGTGCTAGGTGGACCGAGCAAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGGTGGTACCACGCAGAGCCACTaGGCCGTCACAAAGCCCACG +
Preference number: 4 (lower is better)
Translates to: SSQVFDDSNLRLEHYFGGTTQSH*AVTKPT
Trigger: CGTGGGCTTTGTGACGGCCCAGTGGCTCTGCGTGGT...ACCACCAAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp CTAAGACTCGAGCACTATTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCGCCTCCCAAAGGGAGTaGTCATGTCACCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: LRLEHYFGGSPMGQDQNSASQRE*SCHHWA
Trigger: AGCCCAGTGGTGACATGACCACTCCCTTTGGGAGGC...GGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAATAGTGCTCGAGTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp ATGACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTAAGATCCTTCCAGCTTTaGGGTGTGGGTGACTGCACC +
Preference number: 4 (lower is better)
Translates to: MTEEQVWLLIRAVAPKKLRSFQL*GVGDCT
Trigger: GGTGCAGTCACCCACACCCCAAAGCTGGAAGGATCT...TAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CAA 72 bp GAGCTCAGGAGAAACCTGGACACGTCAGAATCTCATTaGTGGCTGGCTCCCATGCCAAGAACTATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: ELRRNLDTSESH*WLAPMPRTMSE
Trigger: CTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGATTCTGACGTGTCCAGGTTTCTCCTGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp GTCTTTTGCTCGGTCCACCTAGCACCTAGGACAGTGACCTTATCCAGAACCAAAGTTGGTGCCCTTTTCTaGGCCTTATATCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VFCSVHLAPRTVTLSRTKVGALF*ALYLAL
Trigger: CAGAGCCAGATATAAGGCTCAGAAAAGGGCACCAAC...TTTGGTTCTGGATAAGGTCACTGTCCTAGGTGCTAGGTGGACCGAGCAAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp CTTATTCAAGGAGAGCCGAGGTGTCTGTCACATCCAGGCTTACCAAGACAGTGTGAGACACCATGGAAGTaGACAAAAGCTCCAGCAACC +
Preference number: 4 (lower is better)
Translates to: LIQGEPRCLSHPGLPRQCETPWK*TKAPAT
Trigger: GGTTGCTGGAGCTTTTGTTCACTTCCATGGTGTCTC...ACACTGTCTTGGTAAGCCTGGATGTGACAGACACCTCGGCTCTCCTTGAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp GTCTTTTGCTCGGTCCACCTAGCACCTAGGACAGTGACCTTATCCAGAACCAAAGAGACACCATGGAAGTaGACAAAAGCTCCAGCAACC +
Preference number: 4 (lower is better)
Translates to: VFCSVHLAPRTVTLSRTKETPWK*TKAPAT
Trigger: GGTTGCTGGAGCTTTTGTTCACTTCCATGGTGTCTC...TTTGGTTCTGGATAAGGTCACTGTCCTAGGTGCTAGGTGGACCGAGCAAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp GGTTCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGCACCAGTTCATCCACTaGGTCTTTTGCTCGGTCCAC +
Preference number: 4 (lower is better)
Translates to: GSVSADNSVLQLALRVLLHQFIH*VFCSVH
Trigger: GTGGACCGAGCAAAAGACTCAGTGGATGAACTGGTG...CAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp AAGCCAGGGTTTGGGCTATGTCTCCTTTTCTCCCAATTGATGCACTCCATCCTTCACCAGTTCATCCACTaGGTCTTTTGCTCGGTCCAC +
Preference number: 4 (lower is better)
Translates to: KPGFGLCLLFSQLMHSILHQFIH*VFCSVH
Trigger: GTGGACCGAGCAAAAGACTCAGTGGATGAACTGGTG...AAGGATGGAGTGCATCAATTGGGAGAAAAGGAGACATAGCCCAAACCCTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp TCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGGCTAGCAAGTCTGGCTTCTaGTACGTGCTGTTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SVSADNSVLQLALRVLLASKSGF*YVLLLP
Trigger: TGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCT...AGCCAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp ATGGAGTCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGCTTTGGGGTGTGGGTaGCTGCACCCAGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: MESSQVFDDSNLRLEHYFALGCG*LHPEAA
Trigger: AGCAGCCTCTGGGTGCAGTCACCCACACCCCAAAGC...AAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGACTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp ATGACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTAAAGACCACCTTCTCTTaGAGAGGGGCCACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: MTEEQVWLLIRAVAPKKLKTTFS*RGATKE
Trigger: CTCCTTTGTGGCCCCTCTGCAAGAGAAGGTGGTCTT...TAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp GGTTCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGAAGACCACCTTCTCTTaGAGAGGGGCCACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: GSVSADNSVLQLALRVLLKTTFS*RGATKE
Trigger: CTCCTTTGTGGCCCCTCTGCAAGAGAAGGTGGTCTT...CAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp CTGACTGCTGAGAGTAAGGCATTCAGGCGCCAACCTGGTGAGAGTTCTCAGCGATCCAAATCTCCTTGGTaGCTGTCATTATCACCTCTT +
Preference number: 4 (lower is better)
Translates to: LTAESKAFRRQPGESSQRSKSPW*LSLSPL
Trigger: AAGAGGTGATAATGACAGCCACCAAGGAGATTTGGA...TCGCTGAGAACTCTCACCAGGTTGGCGCCTGAATGCCTTACTCTCAGCAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp GATCCCAAGAATAAGCCAGGGTTTGGGCTATGTCTCCTTTTCTCCCAATTGATGAAGTGCCGCAGGCCCTaGTTTAGGGTCATAGTCCCT +
Preference number: 4 (lower is better)
Translates to: DPKNKPGFGLCLLFSQLMKCRRP*FRVIVP
Trigger: AGGGACTATGACCCTAAACCAGGGCCTGCGGCACTT...CATCAATTGGGAGAAAAGGAGACATAGCCCAAACCCTGGCTTATTCTTGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TCCAGAGCTCCACAGCAAGGATATGGAAAACTGTCCCATCCCTCTAATAAGACTAAGTGCCGCAGGCCCTaGTTTAGGGTCATAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SRAPQQGYGKLSHPSNKTKCRRP*FRVIVP
Trigger: AGGGACTATGACCCTAAACCAGGGCCTGCGGCACTT...AGTCTTATTAGAGGGATGGGACAGTTTTCCATATCCTTGCTGTGGAGCTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp AGGAAGGGTCTACCAATCTATGTAGATGAGCTCAGGAGAAACCTGGACACGTCAGATCCCACCTTTTGCTaGAGATTGCAAGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: RKGLPIYVDELRRNLDTSDPTFC*RLQGQG
Trigger: CCCTTGCCCTTGCAATCTCCAGCAAAAGGTGGGATC...TGACGTGTCCAGGTTTCTCCTGAGCTCATCTACATAGATTGGTAGACCCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TCTCATTTGTGGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCATTTGGGCTTCTGTCCAAATaGCCACTGTCCTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SHLWLAPMPRTMSEKGPFGLLSK*PLSCWT
Trigger: AGTCCAGCAGGACAGTGGCCATTTGGACAGAAGCCC...AAATGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp TCCAGAGCTCCACAGCAAGGATATGGAAAACTGTCCCATCCCTCTAATAAGACTTCTGGTAGTACATCATaGGGGATCACTCGCCACCGA +
Preference number: 4 (lower is better)
Translates to: SRAPQQGYGKLSHPSNKTSGSTS*GITRHR
Trigger: TCGGTGGCGAGTGATCCCTCATGATGTACTACCAGA...AGTCTTATTAGAGGGATGGGACAGTTTTCCATATCCTTGCTGTGGAGCTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp TTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCATGAACCAGATCCTTTCCTTACTCCCCGATACTaGGGGGTGGCAAACATGTCC +
Preference number: 4 (lower is better)
Translates to: FWWFTYGPRSEFHEPDPFLTPRY*GVANMS
Trigger: GGACATGTTTGCCACCCCTCAGTATCGGGGAGTAAG...GAAAGGATCTGGTTCATGGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp CCATTAGGGTCCAAGGTATGTCAGCCTTTAGAAGGCATCTTGGTGCACCAAGACCTTATCCCTGTAAAGTaGGGTTCAGTGAGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: PLGSKVCQPLEGILVHQDLIPVK*GSVSAD
Trigger: GTCAGCACTCACTGAACCTCACTTTACAGGGATAAG...GTCTTGGTGCACCAAGATGCCTTCTAAAGGCTGACATACCTTGGACCCTAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp AGGAAGGGTCTACCAATCTATGTAGATGAGCTCAGGAGAAACCTGGACACGTCATATCAGGTAGGCCTGTaGCATGAGCCATCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: RKGLPIYVDELRRNLDTSYQVGL*HEPSSC
Trigger: ACAAGACGATGGCTCATGTCACAGGCCTACCTGATA...TGACGTGTCCAGGTTTCTCCTGAGCTCATCTACATAGATTGGTAGACCCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp TCTCATTTGTGGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCATTTGAGCAAGCAAGCCTCTaGCTGCTGAGAGTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: SHLWLAPMPRTMSEKGPFEQASL*LLRVRH
Trigger: ATGCCTTACTCTCAGCAGTCAGAGGCTTGCTTGCTC...AAATGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCATGAACCAGATCCTTTCCTGGCTCTGGAGTCCTaGTGCACCCCAATCGGTTTT +
Preference number: 4 (lower is better)
Translates to: FWWFTYGPRSEFHEPDPFLALES*CTPIGF
Trigger: AAAACCGATTGGGGTGCAGCAGGACTCCAGAGCCAG...GAAAGGATCTGGTTCATGGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TCCAGAGCTCCACAGCAAGGATATGGAAAACTGTCCCATCCCTCTAATAAGACTGGAGGCCGGTGTCCATaGAAGAGGAAGTCATTATCC +
Preference number: 4 (lower is better)
Translates to: SRAPQQGYGKLSHPSNKTGGRCP*KRKSLS
Trigger: GGATAATGACTTCCTCTTGCATGGACACCGGCCTCC...AGTCTTATTAGAGGGATGGGACAGTTTTCCATATCCTTGCTGTGGAGCTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TCCAGAGCTCCACAGCAAGGATATGGAAAACTGTCCCATCCCTCTAATAAGACTATCAACCAGCCTATCTaGCCTATGGTGGCGGCCTTA +
Preference number: 4 (lower is better)
Translates to: SRAPQQGYGKLSHPSNKTINQPI*PMVAAL
Trigger: TAAGGCCGCCACCATAGGGCAGATAGGCTGGTTGAT...AGTCTTATTAGAGGGATGGGACAGTTTTCCATATCCTTGCTGTGGAGCTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp GTCTTTTGCTCGGTCCACCTAGCACCTAGGACAGTGACCTTATCCAGAACCAAAACCAGATGTCACATTTaGCAGGGAAAAAGCGTTCGG +
Preference number: 4 (lower is better)
Translates to: VFCSVHLAPRTVTLSRTKTRCHI*QGKSVR
Trigger: CCGAACGCTTTTTCCCTGGCAAATGTGACATCTGGT...TTTGGTTCTGGATAAGGTCACTGTCCTAGGTGCTAGGTGGACCGAGCAAAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp GTCTTTTGCTCGGTCCACCTAGCACCTAGGACAGTGACCTTATCCAGAACCAAACTGGCTTCTGATACGTaGTGTTGCTCCCAAGAAACT +
Preference number: 4 (lower is better)
Translates to: VFCSVHLAPRTVTLSRTKLASDT*CCSQET
Trigger: AGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAG...TTTGGTTCTGGATAAGGTCACTGTCCTAGGTGCTAGGTGGACCGAGCAAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp GTCTTTTGCTCGGTCCACCTAGCACCTAGGACAGTGACCTTATCCAGAACCAAACTGTTGGCTCGTTCATaGGATACCCAAGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: VFCSVHLAPRTVTLSRTKLLARS*DTQAFL
Trigger: AAGAAAGGCTTGGGTATCCCATGAACGAGCCAACAG...TTTGGTTCTGGATAAGGTCACTGTCCTAGGTGCTAGGTGGACCGAGCAAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGGTGGTCCCGATACTGAGGGGTaGCAAACATGTCCCACTGGG +
Preference number: 4 (lower is better)
Translates to: SSQVFDDSNLRLEHYFGGPDTEG*QTCPTG
Trigger: CCCAGTGGGACATGTTTGCCACCCCTCAGTATCGGG...ACCACCAAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp CTTATTCAAGGAGAGCCGAGGTGTCTGTCACATCCAGGCTTACCAAGACAGTGTTCAGAATCTCATTTGTaGCTGGCTCCCATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: LIQGEPRCLSHPGLPRQCSESHL*LAPMPR
Trigger: TCTTGGCATGGGAGCCAGCCACAAATGAGATTCTGA...ACACTGTCTTGGTAAGCCTGGATGTGACAGACACCTCGGCTCTCCTTGAATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TCCAGAGCTCCACAGCAAGGATATGGAAAACTGTCCCATCCCTCTAATAAGACTGATCCCACCTTTTGCTaGAGATTGCAAGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: SRAPQQGYGKLSHPSNKTDPTFC*RLQGQG
Trigger: CCCTTGCCCTTGCAATCTCCAGCAAAAGGTGGGATC...AGTCTTATTAGAGGGATGGGACAGTTTTCCATATCCTTGCTGTGGAGCTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TCCAGAGCTCCACAGCAAGGATATGGAAAACTGTCCCATCCCTCTAATAAGACTGGCTGCTACTTCTGTTaGTGTTGTGACAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SRAPQQGYGKLSHPSNKTGCYFC*CCDRAA
Trigger: TGCAGCCCTGTCACAACACCAACAGAAGTAGCAGCC...AGTCTTATTAGAGGGATGGGACAGTTTTCCATATCCTTGCTGTGGAGCTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp ACCAAGACACTGTACATTCCGGGGCTATCACCTGATCCTACAGTCACTTTTTGTGTTGGTGCCCTTTTCTaGGCCTTATATCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TKTLYIPGLSPDPTVTFCVGALF*ALYLAL
Trigger: CAGAGCCAGATATAAGGCTCAGAAAAGGGCACCAAC...ACAAAAAGTGACTGTAGGATCAGGTGATAGCCCCGGAATGTACAGTGTCTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp GTCTTTTGCTCGGTCCACCTAGCACCTAGGACAGTGACCTTATCCAGAACCAAAGGAAGTCATTATCCTTaGGCCAGTCTGGTAGTACAT +
Preference number: 4 (lower is better)
Translates to: VFCSVHLAPRTVTLSRTKGSHYP*ASLVVH
Trigger: ATGTACTACCAGACTGGCTCAAGGATAATGACTTCC...TTTGGTTCTGGATAAGGTCACTGTCCTAGGTGCTAGGTGGACCGAGCAAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp GATCCCAAGAATAAGCCAGGGTTTGGGCTATGTCTCCTTTTCTCCCAATTGATGTCCGGGGCTATCACCTaGTCCTACAGTCACTTTTTG +
Preference number: 4 (lower is better)
Translates to: DPKNKPGFGLCLLFSQLMSGAIT*SYSHFL
Trigger: CAAAAAGTGACTGTAGGATCAGGTGATAGCCCCGGA...CATCAATTGGGAGAAAAGGAGACATAGCCCAAACCCTGGCTTATTCTTGGGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp TCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGGCTATGTGCTGCTTCCACTaGGAAAACACATACCACTCC +
Preference number: 4 (lower is better)
Translates to: SVSADNSVLQLALRVLLAMCCFH*ENTYHS
Trigger: GGAGTGGTATGTGTTTTCTCAGTGGAAGCAGCACAT...AGCCAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp CTGACTGCTGAGAGTAAGGCATTCAGGCGCCAACCTGGTGAGAGTTCTCAGCGACTGAGAAAACTCTATTaGATAAATAGGAGACCCTTC +
Preference number: 4 (lower is better)
Translates to: LTAESKAFRRQPGESSQRLRKLY*INRRPF
Trigger: GAAGGGTCTCCTATTTATTCAATAGAGTTTTCTCAG...TCGCTGAGAACTCTCACCAGGTTGGCGCCTGAATGCCTTACTCTCAGCAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp AGGCCTCCCAAAGGGAGTGGTCATGTCACCACTGGGCTAGGGCTATACTCTCTGACAGTGTGTGGTACTTaGATGTTTCATTCTATACAA +
Preference number: 4 (lower is better)
Translates to: RPPKGSGHVTTGLGLYSLTVCGT*MFHSIQ
Trigger: TTGTATAGAATGAAACATGCAAGTACCACACACTGT...CAGAGAGTATAGCCCTAGCCCAGTGGTGACATGACCACTCCCTTTGGGAGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCATGAACCAGATCCTTTCGGACGCCAGTCCCCATaGTCAGGACCTCCATATTTA +
Preference number: 4 (lower is better)
Translates to: FWWFTYGPRSEFHEPDPFGRQSP*SGPPYL
Trigger: TAAATATGGAGGTCCTGAGCATGGGGACTGGCGTCC...GAAAGGATCTGGTTCATGGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp AAGCCAGGGTTTGGGCTATGTCTCCTTTTCTCCCAATTGATGCACTCCATCCTTCTAGATCCCACCTTTTaGTGGAGATTGCAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: KPGFGLCLLFSQLMHSILLDPTF*WRLQGQ
Trigger: TTGCCCTTGCAATCTCCAGCAAAAGGTGGGATCTAG...AAGGATGGAGTGCATCAATTGGGAGAAAAGGAGACATAGCCCAAACCCTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp ATGACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTATATTCTGTCAGGCACTaGACCAGTTCATCCACTGAG +
Preference number: 4 (lower is better)
Translates to: MTEEQVWLLIRAVAPKKLYSVRH*TSSSTE
Trigger: CTCAGTGGATGAACTGGTGCAGTGCCTGACAGAATA...TAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp AGGAAGGGTCTACCAATCTATGTAGATGAGCTCAGGAGAAACCTGGACACGTCATATTCTGTCAGGCACTaGACCAGTTCATCCACTGAG +
Preference number: 4 (lower is better)
Translates to: RKGLPIYVDELRRNLDTSYSVRH*TSSSTE
Trigger: CTCAGTGGATGAACTGGTGCAGTGCCTGACAGAATA...TGACGTGTCCAGGTTTCTCCTGAGCTCATCTACATAGATTGGTAGACCCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp CTTATTCAAGGAGAGCCGAGGTGTCTGTCACATCCAGGCTTACCAAGACAGTGTTCTGATACGTGCTGTTaGTCCCAAGAAACTAAGTGG +
Preference number: 4 (lower is better)
Translates to: LIQGEPRCLSHPGLPRQCSDTCC*SQETKW
Trigger: CCACTTAGTTTCTTGGGAGCAACAGCACGTATCAGA...ACACTGTCTTGGTAAGCCTGGATGTGACAGACACCTCGGCTCTCCTTGAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TCCAGAGCTCCACAGCAAGGATATGGAAAACTGTCCCATCCCTCTAATAAGACTGAACCATCACACAGATaGCTTTCTGGAACCCCAACC +
Preference number: 4 (lower is better)
Translates to: SRAPQQGYGKLSHPSNKTEPSHR*LSGTPT
Trigger: GGTTGGGGTTCCAGAAAGGCATCTGTGTGATGGTTC...AGTCTTATTAGAGGGATGGGACAGTTTTCCATATCCTTGCTGTGGAGCTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TCACTCCCTGGCAATAACATACCATTGTATTTAAAATGCCACACCACTCTTATCGTGTCTCGGACTTCTTaGGAGCCACCGCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SLPGNNIPLYLKCHTTLIVSRTS*EPPLRG
Trigger: TCCCCTCAGCGGTGGCTCCCAAGAAGTCCGAGACAC...GATAAGAGTGGTGTGGCATTTTAAATACAATGGTATGTTATTGCCAGGGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp ATGACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTACTGTTGGCTCGTTCATaGGATACCCAAGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: MTEEQVWLLIRAVAPKKLLLARS*DTQAFL
Trigger: AAGAAAGGCTTGGGTATCCCATGAACGAGCCAACAG...TAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp GGTTCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGGGCTCCAAATCTCCTTaGTGGCTGTCATTATCACCT +
Preference number: 4 (lower is better)
Translates to: GSVSADNSVLQLALRVLLGSKSP*WLSLSP
Trigger: AGGTGATAATGACAGCCACCAAGGAGATTTGGAGCC...CAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp AGGAAGGGTCTACCAATCTATGTAGATGAGCTCAGGAGAAACCTGGACACGTCAGCAAACATGTCCCACTaGGAGACTATAATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RKGLPIYVDELRRNLDTSANMSH*ETIMAA
Trigger: TGCAGCCATTATAGTCTCCCAGTGGGACATGTTTGC...TGACGTGTCCAGGTTTCTCCTGAGCTCATCTACATAGATTGGTAGACCCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp GATCCCAAGAATAAGCCAGGGTTTGGGCTATGTCTCCTTTTCTCCCAATTGATGTGGTCATGTCACCACTaGGCTAGGGCTATACTCTCT +
Preference number: 4 (lower is better)
Translates to: DPKNKPGFGLCLLFSQLMWSCHH*ARAILS
Trigger: AGAGAGTATAGCCCTAGCCCAGTGGTGACATGACCA...CATCAATTGGGAGAAAAGGAGACATAGCCCAAACCCTGGCTTATTCTTGGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp CTTATTCAAGGAGAGCCGAGGTGTCTGTCACATCCAGGCTTACCAAGACAGTGTTTGGTGGTTCACCTATaGGCCAAGATCAGAATTCCA +
Preference number: 4 (lower is better)
Translates to: LIQGEPRCLSHPGLPRQCLVVHL*AKIRIP
Trigger: TGGAATTCTGATCTTGGCCCATAGGTGAACCACCAA...ACACTGTCTTGGTAAGCCTGGATGTGACAGACACCTCGGCTCTCCTTGAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp ACCAAGACACTGTACATTCCGGGGCTATCACCTGATCCTACAGTCACTTTTTGTTGGCCACTGTCCTGCTaGACTATGCTTTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: TKTLYIPGLSPDPTVTFCWPLSC*TMLSQR
Trigger: CCTTTGAGAAAGCATAGTCCAGCAGGACAGTGGCCA...ACAAAAAGTGACTGTAGGATCAGGTGATAGCCCCGGAATGTACAGTGTCTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp GGTTCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGTCCCAAGAAACTAAGTaGGCTTCTGTCCAAATGGCC +
Preference number: 4 (lower is better)
Translates to: GSVSADNSVLQLALRVLLSQETK*ASVQMA
Trigger: GGCCATTTGGACAGAAGCCCACTTAGTTTCTTGGGA...CAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp GTCTTTTGCTCGGTCCACCTAGCACCTAGGACAGTGACCTTATCCAGAACCAAAGAAATCCCACATCAATaGAACCATCACACAGATGCC +
Preference number: 4 (lower is better)
Translates to: VFCSVHLAPRTVTLSRTKEIPHQ*NHHTDA
Trigger: GGCATCTGTGTGATGGTTCCATTGATGTGGGATTTC...TTTGGTTCTGGATAAGGTCACTGTCCTAGGTGCTAGGTGGACCGAGCAAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp GATCCCAAGAATAAGCCAGGGTTTGGGCTATGTCTCCTTTTCTCCCAATTGATGAAGCCCTCATCTTCCTaGGGAGCTTCATCACTGTAT +
Preference number: 4 (lower is better)
Translates to: DPKNKPGFGLCLLFSQLMKPSSS*GASSLY
Trigger: ATACAGTGATGAAGCTCCTCAGGAAGATGAGGGCTT...CATCAATTGGGAGAAAAGGAGACATAGCCCAAACCCTGGCTTATTCTTGGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp CTAAGACTCGAGCACTATTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCAAACTCCTGGAGGTTTaGGACACCATGGAAGTGAAC +
Preference number: 4 (lower is better)
Translates to: LRLEHYFGGSPMGQDQNSKLLEV*DTMEVN
Trigger: GTTCACTTCCATGGTGTCTCAAACCTCCAGGAGTTT...GGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAATAGTGCTCGAGTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp TCCAGAGCTCCACAGCAAGGATATGGAAAACTGTCCCATCCCTCTAATAAGACTAAACTCCTGGAGGTTTaGGACACCATGGAAGTGAAC +
Preference number: 4 (lower is better)
Translates to: SRAPQQGYGKLSHPSNKTKLLEV*DTMEVN
Trigger: GTTCACTTCCATGGTGTCTCAAACCTCCAGGAGTTT...AGTCTTATTAGAGGGATGGGACAGTTTTCCATATCCTTGCTGTGGAGCTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp ACCAAGACACTGTACATTCCGGGGCTATCACCTGATCCTACAGTCACTTTTTGTAGGTTCAGTGAGTGCTaGCAACTCCGTACTACAACT +
Preference number: 4 (lower is better)
Translates to: TKTLYIPGLSPDPTVTFCRFSEC*QLRTTT
Trigger: AGTTGTAGTACGGAGTTGTCAGCACTCACTGAACCT...ACAAAAAGTGACTGTAGGATCAGGTGATAGCCCCGGAATGTACAGTGTCTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp AGGAAGGGTCTACCAATCTATGTAGATGAGCTCAGGAGAAACCTGGACACGTCAGTACCATCCAGTTGGTaGCCTTTTCTGAGCCTTATA +
Preference number: 4 (lower is better)
Translates to: RKGLPIYVDELRRNLDTSVPSSW*PFLSLI
Trigger: TATAAGGCTCAGAAAAGGGCACCAACTGGATGGTAC...TGACGTGTCCAGGTTTCTCCTGAGCTCATCTACATAGATTGGTAGACCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TCTCATTTGTGGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCATTTGGAGACTATAATGGCTaGAATGCCCAGCACACAGAT +
Preference number: 4 (lower is better)
Translates to: SHLWLAPMPRTMSEKGPFGDYNG*NAQHTD
Trigger: ATCTGTGTGCTGGGCATTGCAGCCATTATAGTCTCC...AAATGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp ACCAAGACACTGTACATTCCGGGGCTATCACCTGATCCTACAGTCACTTTTTGTACCAGATGTCACATTTaGCAGGGAAAAAGCGTTCGG +
Preference number: 4 (lower is better)
Translates to: TKTLYIPGLSPDPTVTFCTRCHI*QGKSVR
Trigger: CCGAACGCTTTTTCCCTGGCAAATGTGACATCTGGT...ACAAAAAGTGACTGTAGGATCAGGTGATAGCCCCGGAATGTACAGTGTCTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGGTGGTGATCAGAAGCCAGTTTaGCAAGGGTCTTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SSQVFDDSNLRLEHYFGGDQKPV*QGSCRA
Trigger: GGCTCTGCAAGACCCTTGGCAAACTGGCTTCTGATC...ACCACCAAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TCCAGAGCTCCACAGCAAGGATATGGAAAACTGTCCCATCCCTCTAATAAGACTCTAGATCCCACCTTTTaGTGGAGATTGCAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: SRAPQQGYGKLSHPSNKTLDPTF*WRLQGQ
Trigger: TTGCCCTTGCAATCTCCAGCAAAAGGTGGGATCTAG...AGTCTTATTAGAGGGATGGGACAGTTTTCCATATCCTTGCTGTGGAGCTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp AGGAAGGGTCTACCAATCTATGTAGATGAGCTCAGGAGAAACCTGGACACGTCAAAATGGCCACTGTCCTaGTGGACTATGCTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: RKGLPIYVDELRRNLDTSKWPLS*WTMLSQ
Trigger: TTGAGAAAGCATAGTCCAGCAGGACAGTGGCCATTT...TGACGTGTCCAGGTTTCTCCTGAGCTCATCTACATAGATTGGTAGACCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp ATGACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTACTCTTCTTGGGAGAATaGACCTTCAGGATAGTGAGT +
Preference number: 4 (lower is better)
Translates to: MTEEQVWLLIRAVAPKKLLFLGE*TFRIVS
Trigger: ACTCACTATCCTGAAGGTCCATTCTCCCAAGAAGAG...TAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCATGAACCAGATCCTTTCTCTGTCCCCTCTTCTTaGGAGAATGGACCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: FWWFTYGPRSEFHEPDPFSVPSS*ENGPSG
Trigger: TCCTGAAGGTCCATTCTCCCAAGAAGAGGGGACAGA...GAAAGGATCTGGTTCATGGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TCTCATTTGTGGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCATTTGCAAACATGTCCCACTaGGAGACTATAATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SHLWLAPMPRTMSEKGPFANMSH*ETIMAA
Trigger: TGCAGCCATTATAGTCTCCCAGTGGGACATGTTTGC...AAATGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TCACTCCCTGGCAATAACATACCATTGTATTTAAAATGCCACACCACTCTTATCCCCGATACTGAGGGGTaGCAAACATGTCCCACTGGG +
Preference number: 4 (lower is better)
Translates to: SLPGNNIPLYLKCHTTLIPDTEG*QTCPTG
Trigger: CCCAGTGGGACATGTTTGCCACCCCTCAGTATCGGG...GATAAGAGTGGTGTGGCATTTTAAATACAATGGTATGTTATTGCCAGGGAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp ATGGAGTCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTTCTAGAGCTCCTCCATaGCCTCCAGCACCCCTTTAC +
Preference number: 4 (lower is better)
Translates to: MESSQVFDDSNLRLEHYFSRAPP*PPAPLY
Trigger: GTAAAGGGGTGCTGGAGGCCATGGAGGAGCTCTAGA...AAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGACTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp GATCCCAAGAATAAGCCAGGGTTTGGGCTATGTCTCCTTTTCTCCCAATTGATGTCAGAATCTCATTTGTaGCTGGCTCCCATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: DPKNKPGFGLCLLFSQLMSESHL*LAPMPR
Trigger: TCTTGGCATGGGAGCCAGCCACAAATGAGATTCTGA...CATCAATTGGGAGAAAAGGAGACATAGCCCAAACCCTGGCTTATTCTTGGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp TTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCATGAACCAGATCCTTTCAAGCCCTCATCTTCCTaGGGAGCTTCATCACTGTAT +
Preference number: 4 (lower is better)
Translates to: FWWFTYGPRSEFHEPDPFKPSSS*GASSLY
Trigger: ATACAGTGATGAAGCTCCTCAGGAAGATGAGGGCTT...GAAAGGATCTGGTTCATGGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp TACAGTCACTTTTTGTGCAAAATTCAAACAGTGTGTGGTACTTGCATGTTTCATCCGAGAGACCCCCTCTaGGTGGCAGTAGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: YSHFLCKIQTVCGTCMFHPRDPL*VAVDCV
Trigger: CACACAGTCTACTGCCACTCAGAGGGGGTCTCTCGG...ATGAAACATGCAAGTACCACACACTGTTTGAATTTTGCACAAAAAGTGACTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp TCACTCCCTGGCAATAACATACCATTGTATTTAAAATGCCACACCACTCTTATCCTTACTCCCCGATACTaGGGGGTGGCAAACATGTCC +
Preference number: 4 (lower is better)
Translates to: SLPGNNIPLYLKCHTTLILTPRY*GVANMS
Trigger: GGACATGTTTGCCACCCCTCAGTATCGGGGAGTAAG...GATAAGAGTGGTGTGGCATTTTAAATACAATGGTATGTTATTGCCAGGGAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp GATCCCAAGAATAAGCCAGGGTTTGGGCTATGTCTCCTTTTCTCCCAATTGATGACCAATCTATGTAGATaGGCTCAGGAGAAACCTGGA +
Preference number: 4 (lower is better)
Translates to: DPKNKPGFGLCLLFSQLMTNLCR*AQEKPG
Trigger: TCCAGGTTTCTCCTGAGCTCATCTACATAGATTGGT...CATCAATTGGGAGAAAAGGAGACATAGCCCAAACCCTGGCTTATTCTTGGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp TCCAGAGCTCCACAGCAAGGATATGGAAAACTGTCCCATCCCTCTAATAAGACTAAGATCAGAATTCCATaGACCAGATCCTTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: SRAPQQGYGKLSHPSNKTKIRIP*TRSFPH
Trigger: GTGGGGAAAGGATCTGGTTCATGGAATTCTGATCTT...AGTCTTATTAGAGGGATGGGACAGTTTTCCATATCCTTGCTGTGGAGCTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp ATGGAGTCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGTATCCCAAAGTGCATaGCCGAAGAGCAAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: MESSQVFDDSNLRLEHYFVSQSA*PKSKSG
Trigger: GCCAGACTTGCTCTTCGGTCATGCACTTTGGGATAC...AAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGACTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp AGGAAGGGTCTACCAATCTATGTAGATGAGCTCAGGAGAAACCTGGACACGTCATTAATGGTGAAAGAATaGAGCTGTAGAGGTCCCAAC +
Preference number: 4 (lower is better)
Translates to: RKGLPIYVDELRRNLDTSLMVKE*SCRGPN
Trigger: GTTGGGACCTCTACAGCTTCATTCTTTCACCATTAA...TGACGTGTCCAGGTTTCTCCTGAGCTCATCTACATAGATTGGTAGACCCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp CTAAGACTCGAGCACTATTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCAAATGGCCACTGTCCTaGTGGACTATGCTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LRLEHYFGGSPMGQDQNSKWPLS*WTMLSQ
Trigger: TTGAGAAAGCATAGTCCAGCAGGACAGTGGCCATTT...GGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAATAGTGCTCGAGTCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp CTAAGACTCGAGCACTATTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCTCTGATACGTGCTGTTaGTCCCAAGAAACTAAGTGG +
Preference number: 4 (lower is better)
Translates to: LRLEHYFGGSPMGQDQNSSDTCC*SQETKW
Trigger: CCACTTAGTTTCTTGGGAGCAACAGCACGTATCAGA...GGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAATAGTGCTCGAGTCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCATGAACCAGATCCTTTCCTGGCTTCTGATACGTaGTGTTGCTCCCAAGAAACT +
Preference number: 4 (lower is better)
Translates to: FWWFTYGPRSEFHEPDPFLASDT*CCSQET
Trigger: AGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAG...GAAAGGATCTGGTTCATGGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGGTGGTGAACCATCACACAGATaGCTTTCTGGAACCCCAACC +
Preference number: 4 (lower is better)
Translates to: SSQVFDDSNLRLEHYFGGEPSHR*LSGTPT
Trigger: GGTTGGGGTTCCAGAAAGGCATCTGTGTGATGGTTC...ACCACCAAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp GATCCCAAGAATAAGCCAGGGTTTGGGCTATGTCTCCTTTTCTCCCAATTGATGCTCTTCTTGGGAGAATaGACCTTCAGGATAGTGAGT +
Preference number: 4 (lower is better)
Translates to: DPKNKPGFGLCLLFSQLMLFLGE*TFRIVS
Trigger: ACTCACTATCCTGAAGGTCCATTCTCCCAAGAAGAG...CATCAATTGGGAGAAAAGGAGACATAGCCCAAACCCTGGCTTATTCTTGGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp ATGGAGTCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTCCTTATATCTGGCTCTaGAGTCCTGCTGCACCCCAA +
Preference number: 4 (lower is better)
Translates to: MESSQVFDDSNLRLEHYFPYIWL*SPAAPQ
Trigger: TTGGGGTGCAGCAGGACTCCAGAGCCAGATATAAGG...AAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGACTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGGTGGTTCTGAGCCTTATATCTaGCTCTGGAGTCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSQVFDDSNLRLEHYFGGSEPYI*LWSPAA
Trigger: TGCAGCAGGACTCCAGAGCCAGATATAAGGCTCAGA...ACCACCAAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGGTGGTCGTGTACCATCCAGTTaGTGCCCTTTTCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: SSQVFDDSNLRLEHYFGGRVPSS*CPFLSL
Trigger: AAGGCTCAGAAAAGGGCACCAACTGGATGGTACACG...ACCACCAAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp AAGCCAGGGTTTGGGCTATGTCTCCTTTTCTCCCAATTGATGCACTCCATCCTTTCCAAATCTCCTTGGTaGCTGTCATTATCACCTCTT +
Preference number: 4 (lower is better)
Translates to: KPGFGLCLLFSQLMHSILSKSPW*LSLSPL
Trigger: AAGAGGTGATAATGACAGCCACCAAGGAGATTTGGA...AAGGATGGAGTGCATCAATTGGGAGAAAAGGAGACATAGCCCAAACCCTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp ACCAAGACACTGTACATTCCGGGGCTATCACCTGATCCTACAGTCACTTTTTGTCAGATGCCTCTAAAATaGGCTCCAAATCTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: TKTLYIPGLSPDPTVTFCQMPLK*APNLLG
Trigger: ACCAAGGAGATTTGGAGCCCATTTTAGAGGCATCTG...ACAAAAAGTGACTGTAGGATCAGGTGATAGCCCCGGAATGTACAGTGTCTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TCCAGAGCTCCACAGCAAGGATATGGAAAACTGTCCCATCCCTCTAATAAGACTAATCTCATTTGTGGCTaGCTCCCATGCCAAGAACTA +
Preference number: 4 (lower is better)
Translates to: SRAPQQGYGKLSHPSNKTNLICG*LPCQEL
Trigger: TAGTTCTTGGCATGGGAGCCAGCCACAAATGAGATT...AGTCTTATTAGAGGGATGGGACAGTTTTCCATATCCTTGCTGTGGAGCTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp ACCAAGACACTGTACATTCCGGGGCTATCACCTGATCCTACAGTCACTTTTTGTAGCTCAGGAGAAACCTaGACACGTCAGAATCTCATT +
Preference number: 4 (lower is better)
Translates to: TKTLYIPGLSPDPTVTFCSSGET*TRQNLI
Trigger: AATGAGATTCTGACGTGTCCAGGTTTCTCCTGAGCT...ACAAAAAGTGACTGTAGGATCAGGTGATAGCCCCGGAATGTACAGTGTCTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp TCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGGTGGTCTTATCCCTGTAAAGTaGGGTTCAGTGAGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: SSQVFDDSNLRLEHYFGGLIPVK*GSVSAD
Trigger: GTCAGCACTCACTGAACCTCACTTTACAGGGATAAG...ACCACCAAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp TTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCATGAACCAGATCCTTTCAAGATCAGAATTCCATaGACCAGATCCTTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: FWWFTYGPRSEFHEPDPFKIRIP*TRSFPH
Trigger: GTGGGGAAAGGATCTGGTTCATGGAATTCTGATCTT...GAAAGGATCTGGTTCATGGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp TCCAGAGCTCCACAGCAAGGATATGGAAAACTGTCCCATCCCTCTAATAAGACTTTAATGGTGAAAGAATaGAGCTGTAGAGGTCCCAAC +
Preference number: 4 (lower is better)
Translates to: SRAPQQGYGKLSHPSNKTLMVKE*SCRGPN
Trigger: GTTGGGACCTCTACAGCTTCATTCTTTCACCATTAA...AGTCTTATTAGAGGGATGGGACAGTTTTCCATATCCTTGCTGTGGAGCTCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGGCTGATGTGTCCAAATGTTaGCTGTTTCTGTGTGTATTC +
Preference number: 4 (lower is better)
Translates to: SVSADNSVLQLALRVLLADVSKC*LFLCVF
Trigger: GAATACACACAGAAACAGGCAACATTTGGACACATC...AGCCAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp GGTTCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGTTTCCTAAGGGTTTGTaGTATGTTGAACCAGATCCT +
Preference number: 4 (lower is better)
Translates to: GSVSADNSVLQLALRVLLFPKGL*YVEPDP
Trigger: AGGATCTGGTTCAACATAGCACAAACCCTTAGGAAA...CAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp GTCTTTTGCTCGGTCCACCTAGCACCTAGGACAGTGACCTTATCCAGAACCAAAAGAAAATTAAAAATCTaGACAGAGCAAGCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: VFCSVHLAPRTVTLSRTKRKLKI*TEQASL
Trigger: GAGGCTTGCTTGCTCTGTGCAGATTTTTAATTTTCT...TTTGGTTCTGGATAAGGTCACTGTCCTAGGTGCTAGGTGGACCGAGCAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCATGAACCAGATCCTTTCATGAAACGAAACTCCTaGAGGTTTGAGACACCATGG +
Preference number: 4 (lower is better)
Translates to: FWWFTYGPRSEFHEPDPFMKRNS*RFETPW
Trigger: CCATGGTGTCTCAAACCTCCAGGAGTTTCGTTTCAT...GAAAGGATCTGGTTCATGGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TACAGTCACTTTTTGTGCAAAATTCAAACAGTGTGTGGTACTTGCATGTTTCATGCCTCCCAAAGGGAGTaGTCATGTCACCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: YSHFLCKIQTVCGTCMFHASQRE*SCHHWA
Trigger: AGCCCAGTGGTGACATGACCACTCCCTTTGGGAGGC...ATGAAACATGCAAGTACCACACACTGTTTGAATTTTGCACAAAAAGTGACTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
3UTR CAA 72 bp TTCTACACTGGATTCTTTCTTCCTAGATCCCACCTTTaGCTGGAGATTGCAAGGGCAAGGGAGGAAAATAAC +
Preference number: 4 (lower is better)
Translates to: FYTGFFLPRSHL*LEIARAREENN
Trigger: GTTATTTTCCTCCCTTGCCCTTGCAATCTCCAGCAAAAGGTGGGATCTAGGAAGAAAGAATCCAGTGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp TACAGTCACTTTTTGTGCAAAATTCAAACAGTGTGTGGTACTTGCATGTTTCATGGTAGGCCTGTGACATaGGCCATCGTCTTGTACCTC +
Preference number: 4 (lower is better)
Translates to: YSHFLCKIQTVCGTCMFHGRPVT*AIVLYL
Trigger: GAGGTACAAGACGATGGCTCATGTCACAGGCCTACC...ATGAAACATGCAAGTACCACACACTGTTTGAATTTTGCACAAAAAGTGACTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TCCAGAGCTCCACAGCAAGGATATGGAAAACTGTCCCATCCCTCTAATAAGACTTGTCCTGCTGGACTATaGTTTCTCAAAGGGATTAAT +
Preference number: 4 (lower is better)
Translates to: SRAPQQGYGKLSHPSNKTCPAGL*FLKGIN
Trigger: ATTAATCCCTTTGAGAAAGCATAGTCCAGCAGGACA...AGTCTTATTAGAGGGATGGGACAGTTTTCCATATCCTTGCTGTGGAGCTCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TCACTCCCTGGCAATAACATACCATTGTATTTAAAATGCCACACCACTCTTATCCGCTGTATCCCAAAGTaGATGACCGAAGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: SLPGNNIPLYLKCHTTLIRCIPK*MTEEQV
Trigger: GACTTGCTCTTCGGTCATGCACTTTGGGATACAGCG...GATAAGAGTGGTGTGGCATTTTAAATACAATGGTATGTTATTGCCAGGGAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp CCATTAGGGTCCAAGGTATGTCAGCCTTTAGAAGGCATCTTGGTGCACCAAGACAATTCAAACAGTGTGTaGTACTTGCATGTTTCATTC +
Preference number: 4 (lower is better)
Translates to: PLGSKVCQPLEGILVHQDNSNSV*YLHVSF
Trigger: GAATGAAACATGCAAGTACCACACACTGTTTGAATT...GTCTTGGTGCACCAAGATGCCTTCTAAAGGCTGACATACCTTGGACCCTAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TACAGTCACTTTTTGTGCAAAATTCAAACAGTGTGTGGTACTTGCATGTTTCATGGGCTTCTGTCCAAATaGCCACTGTCCTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: YSHFLCKIQTVCGTCMFHGLLSK*PLSCWT
Trigger: AGTCCAGCAGGACAGTGGCCATTTGGACAGAAGCCC...ATGAAACATGCAAGTACCACACACTGTTTGAATTTTGCACAAAAAGTGACTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp ATGGAGTCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTACCGAAGAGCAAGTCTaGCTTCTGATACGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: MESSQVFDDSNLRLEHYFTEEQV*LLIRAV
Trigger: AACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGT...AAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGACTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp TCACTCCCTGGCAATAACATACCATTGTATTTAAAATGCCACACCACTCTTATCAGGTTCAGTGAGTGCTaGCAACTCCGTACTACAACT +
Preference number: 4 (lower is better)
Translates to: SLPGNNIPLYLKCHTTLIRFSEC*QLRTTT
Trigger: AGTTGTAGTACGGAGTTGTCAGCACTCACTGAACCT...GATAAGAGTGGTGTGGCATTTTAAATACAATGGTATGTTATTGCCAGGGAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR TCA 90 bp ACCAAGACACTGTACATTCCGGGGCTATCACCTGATCCTACAGTCACTTTTTGTCTGAGAAAACTCTATTaGATAAATAGGAGACCCTTC +
Preference number: 4 (lower is better)
Translates to: TKTLYIPGLSPDPTVTFCLRKLY*INRRPF
Trigger: GAAGGGTCTCCTATTTATTCAATAGAGTTTTCTCAG...ACAAAAAGTGACTGTAGGATCAGGTGATAGCCCCGGAATGTACAGTGTCTTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TACAGTCACTTTTTGTGCAAAATTCAAACAGTGTGTGGTACTTGCATGTTTCATATCAACCAGCCTATCTaGCCTATGGTGGCGGCCTTA +
Preference number: 4 (lower is better)
Translates to: YSHFLCKIQTVCGTCMFHINQPI*PMVAAL
Trigger: TAAGGCCGCCACCATAGGGCAGATAGGCTGGTTGAT...ATGAAACATGCAAGTACCACACACTGTTTGAATTTTGCACAAAAAGTGACTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp GGTTCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGACAGTGTGTGGTACTTaGATGTTTCATTCTATACAA +
Preference number: 4 (lower is better)
Translates to: GSVSADNSVLQLALRVLLTVCGT*MFHSIQ
Trigger: TTGTATAGAATGAAACATGCAAGTACCACACACTGT...CAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp CTAAGACTCGAGCACTATTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCCCATTGTATTTAAAATaGCACACCACTCTTATCCCT +
Preference number: 4 (lower is better)
Translates to: LRLEHYFGGSPMGQDQNSPLYLK*HTTLIP
Trigger: AGGGATAAGAGTGGTGTGGCATTTTAAATACAATGG...GGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAATAGTGCTCGAGTCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TCTCATTTGTGGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCATTTAGAAAATTAAAAATCTaGACAGAGCAAGCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: SHLWLAPMPRTMSEKGPFRKLKI*TEQASL
Trigger: GAGGCTTGCTTGCTCTGTGCAGATTTTTAATTTTCT...AAATGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp AGGAAGGGTCTACCAATCTATGTAGATGAGCTCAGGAGAAACCTGGACACGTCAGATGAAGCAAGGTTGTaGATTACAGTAGAAAGAATA +
Preference number: 4 (lower is better)
Translates to: RKGLPIYVDELRRNLDTSDEARL*ITVERI
Trigger: TATTCTTTCTACTGTAATCCACAACCTTGCTTCATC...TGACGTGTCCAGGTTTCTCCTGAGCTCATCTACATAGATTGGTAGACCCTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp ATGACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTAGATGAAGCAAGGTTGTaGATTACAGTAGAAAGAATA +
Preference number: 4 (lower is better)
Translates to: MTEEQVWLLIRAVAPKKLDEARL*ITVERI
Trigger: TATTCTTTCTACTGTAATCCACAACCTTGCTTCATC...TAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp ATGGAGTCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTTTGGTGGTTCACCTATaGGCCAAGATCAGAATTCCA +
Preference number: 4 (lower is better)
Translates to: MESSQVFDDSNLRLEHYFLVVHL*AKIRIP
Trigger: TGGAATTCTGATCTTGGCCCATAGGTGAACCACCAA...AAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGACTCCAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TACAGTCACTTTTTGTGCAAAATTCAAACAGTGTGTGGTACTTGCATGTTTCATGGCTGCTACTTCTGTTaGTGTTGTGACAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: YSHFLCKIQTVCGTCMFHGCYFC*CCDRAA
Trigger: TGCAGCCCTGTCACAACACCAACAGAAGTAGCAGCC...ATGAAACATGCAAGTACCACACACTGTTTGAATTTTGCACAAAAAGTGACTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TACAGTCACTTTTTGTGCAAAATTCAAACAGTGTGTGGTACTTGCATGTTTCATCGCTGTATCCCAAAGTaGATGACCGAAGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: YSHFLCKIQTVCGTCMFHRCIPK*MTEEQV
Trigger: GACTTGCTCTTCGGTCATGCACTTTGGGATACAGCG...ATGAAACATGCAAGTACCACACACTGTTTGAATTTTGCACAAAAAGTGACTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TACAGTCACTTTTTGTGCAAAATTCAAACAGTGTGTGGTACTTGCATGTTTCATCGTGTACCATCCAGTTaGTGCCCTTTTCTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: YSHFLCKIQTVCGTCMFHRVPSS*CPFLSL
Trigger: AAGGCTCAGAAAAGGGCACCAACTGGATGGTACACG...ATGAAACATGCAAGTACCACACACTGTTTGAATTTTGCACAAAAAGTGACTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TCTCATTTGTGGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCATTTCAAATAAATATGATATaGATCAGAAGCCAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: SHLWLAPMPRTMSEKGPFQINMI*IRSQFA
Trigger: GGCAAACTGGCTTCTGATCCATATCATATTTATTTG...AAATGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp ATGGAGTCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGATGTGTCCAAATGTTaGCTGTTTCTGTGTGTATTC +
Preference number: 4 (lower is better)
Translates to: MESSQVFDDSNLRLEHYFDVSKC*LFLCVF
Trigger: GAATACACACAGAAACAGGCAACATTTGGACACATC...AAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGACTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TACAGTCACTTTTTGTGCAAAATTCAAACAGTGTGTGGTACTTGCATGTTTCATGGAGACTATAATGGCTaGAATGCCCAGCACACAGAT +
Preference number: 4 (lower is better)
Translates to: YSHFLCKIQTVCGTCMFHGDYNG*NAQHTD
Trigger: ATCTGTGTGCTGGGCATTGCAGCCATTATAGTCTCC...ATGAAACATGCAAGTACCACACACTGTTTGAATTTTGCACAAAAAGTGACTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp ATGGAGTCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTTGTCCTGCTGGACTATaGTTTCTCAAAGGGATTAAT +
Preference number: 4 (lower is better)
Translates to: MESSQVFDDSNLRLEHYFCPAGL*FLKGIN
Trigger: ATTAATCCCTTTGAGAAAGCATAGTCCAGCAGGACA...AAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGACTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TACAGTCACTTTTTGTGCAAAATTCAAACAGTGTGTGGTACTTGCATGTTTCATGGCTCCAAATCTCCTTaGTGGCTGTCATTATCACCT +
Preference number: 4 (lower is better)
Translates to: YSHFLCKIQTVCGTCMFHGSKSP*WLSLSP
Trigger: AGGTGATAATGACAGCCACCAAGGAGATTTGGAGCC...ATGAAACATGCAAGTACCACACACTGTTTGAATTTTGCACAAAAAGTGACTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCATGAACCAGATCCTTTCCAAATAAATATGATATaGATCAGAAGCCAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: FWWFTYGPRSEFHEPDPFQINMI*IRSQFA
Trigger: GGCAAACTGGCTTCTGATCCATATCATATTTATTTG...GAAAGGATCTGGTTCATGGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TACAGTCACTTTTTGTGCAAAATTCAAACAGTGTGTGGTACTTGCATGTTTCATATGAAACGAAACTCCTaGAGGTTTGAGACACCATGG +
Preference number: 4 (lower is better)
Translates to: YSHFLCKIQTVCGTCMFHMKRNS*RFETPW
Trigger: CCATGGTGTCTCAAACCTCCAGGAGTTTCGTTTCAT...ATGAAACATGCAAGTACCACACACTGTTTGAATTTTGCACAAAAAGTGACTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CCA 90 bp TCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGGTGGTAATTCAAACAGTGTGTaGTACTTGCATGTTTCATTC +
Preference number: 4 (lower is better)
Translates to: SSQVFDDSNLRLEHYFGGNSNSV*YLHVSF
Trigger: GAATGAAACATGCAAGTACCACACACTGTTTGAATT...ACCACCAAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TCACTCCCTGGCAATAACATACCATTGTATTTAAAATGCCACACCACTCTTATCCCATTGTATTTAAAATaGCACACCACTCTTATCCCT +
Preference number: 4 (lower is better)
Translates to: SLPGNNIPLYLKCHTTLIPLYLK*HTTLIP
Trigger: AGGGATAAGAGTGGTGTGGCATTTTAAATACAATGG...GATAAGAGTGGTGTGGCATTTTAAATACAATGGTATGTTATTGCCAGGGAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR GCA 90 bp TACAGTCACTTTTTGTGCAAAATTCAAACAGTGTGTGGTACTTGCATGTTTCATTTTCCTAAGGGTTTGTaGTATGTTGAACCAGATCCT +
Preference number: 4 (lower is better)
Translates to: YSHFLCKIQTVCGTCMFHFPKGL*YVEPDP
Trigger: AGGATCTGGTTCAACATAGCACAAACCCTTAGGAAA...ATGAAACATGCAAGTACCACACACTGTTTGAATTTTGCACAAAAAGTGACTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS TCA 90 bp GGAAAAAGCGTTCGGGGATCCGGGCAGCATACAGGGCAGCTCCTGTaGTGTAGAGGCTGGCCATCAGCATCAACCAGCCTATCTGCCCTA +
Preference number: 5 (lower is better)
Translates to: GKSVRGSGQHTGQLL*CRGWPSASTSLSAL
Trigger: TAGGGCAGATAGGCTGGTTGATGCTGATGGCCAGCCTCTACATCACAGGAGCTGCCCTGTATGCTGCCCGGATCCCCGAACGCTTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp CCCACGAGGCTGTCAAAGTTTTGGGGCTCCTCTGGTACTGGCATCAGTAGCCAGGAGGCTGTCAAAGTTTaGGGGCTCCTCTGGTACTGG +
Preference number: 5 (lower is better)
Translates to: PTRLSKFWGSSGTGISSQEAVKV*GLLWYW
Trigger: CCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCTC...CTGGCTACTGATGCCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCTCGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGGCTCGTGTCTCGGACTTCTaGGGAGCCACCGCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: SVSADNSVLQLALRVLLARVSDF*GATAEG
Trigger: CCCCTCAGCGGTGGCTCCCAAGAAGTCCGAGACACG...AGCCAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp AGGCCTCCCAAAGGGAGTGGTCATGTCACCACTGGGCTAGGGCTATACTCTCTGCCTAGATCCCACCTTTaGCTGGAGATTGCAAGGGCA +
Preference number: 5 (lower is better)
Translates to: RPPKGSGHVTTGLGLYSLPRSHL*LEIARA
Trigger: TGCCCTTGCAATCTCCAGCAAAAGGTGGGATCTAGG...CAGAGAGTATAGCCCTAGCCCAGTGGTGACATGACCACTCCCTTTGGGAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCATGAACCAGATCCTTTCCGTGTCTCGGACTTCTaGGGAGCCACCGCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: FWWFTYGPRSEFHEPDPFRVSDF*GATAEG
Trigger: CCCCTCAGCGGTGGCTCCCAAGAAGTCCGAGACACG...GAAAGGATCTGGTTCATGGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp CCCACGAGGCTGTCAAAGTTTTGGGGCTCCTCTGGTACTGGCATCAGTAGCCAGAGGGTTTGTGCTATGTaGAACCAGATCCTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: PTRLSKFWGSSGTGISSQRVCAM*NQILPA
Trigger: AGCTGGAAGGATCTGGTTCAACATAGCACAAACCCT...CTGGCTACTGATGCCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCTCGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS TCA 90 bp TGTCATTATCACCTCTTCGTGTACCATCCAGTTGGTGCCCTTTTCTaGGCCTTATATCTGGCTCTGGAGTCCTGCTGCACCCCAATCGGT +
Preference number: 5 (lower is better)
Translates to: CHYHLFVYHPVGALF*ALYLALESCCTPIG
Trigger: ACCGATTGGGGTGCAGCAGGACTCCAGAGCCAGATATAAGGCTCAGAAAAGGGCACCAACTGGATGGTACACGAAGAGGTGATAATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357103.5
ENST00000537545.1
ENST00000643427.1
ENST00000645126.2
CDS TCA 90 bp GTAGGTATCACAGTGCATCCTCTTCACTGCAGCCCCCGCCGATCATaGAACGAAACTCCTGGAGGTTTGAGACACCATGGAAGTGAACAA +
Preference number: 5 (lower is better)
Translates to: VGITVHPLHCSPRRS*NETPGGLRHHGSEQ
Trigger: TTGTTCACTTCCATGGTGTCTCAAACCTCCAGGAGTTTCGTTTCATGATCGGCGGGGGCTGCAGTGAAGAGGATGCACTGTGATACCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp CCATTAGGGTCCAAGGTATGTCAGCCTTTAGAAGGCATCTTGGTGCACCAAGACCTTCAGGATAGTGAGTaGATCCGCGTGTCTCGGACT +
Preference number: 5 (lower is better)
Translates to: PLGSKVCQPLEGILVHQDLQDSE*IRVSRT
Trigger: AGTCCGAGACACGCGGATCAACTCACTATCCTGAAG...GTCTTGGTGCACCAAGATGCCTTCTAAAGGCTGACATACCTTGGACCCTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp CTTATTCAAGGAGAGCCGAGGTGTCTGTCACATCCAGGCTTACCAAGACAGTGTTCGTGTACCATCCAGTaGGTGCCCTTTTCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: LIQGEPRCLSHPGLPRQCSCTIQ*VPFSEP
Trigger: AGGCTCAGAAAAGGGCACCAACTGGATGGTACACGA...ACACTGTCTTGGTAAGCCTGGATGTGACAGACACCTCGGCTCTCCTTGAATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp CCATTAGGGTCCAAGGTATGTCAGCCTTTAGAAGGCATCTTGGTGCACCAAGACGACTCGAGCACTATTTaGGTGGTTCACCTATGGGCC +
Preference number: 5 (lower is better)
Translates to: PLGSKVCQPLEGILVHQDDSSTI*VVHLWA
Trigger: GGCCCATAGGTGAACCACCAAAATAGTGCTCGAGTC...GTCTTGGTGCACCAAGATGCCTTCTAAAGGCTGACATACCTTGGACCCTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGGCTCATCCACTGAGTCTTTaGCTCGGTCCACCTAGCACC +
Preference number: 5 (lower is better)
Translates to: SVSADNSVLQLALRVLLAHPLSL*LGPPST
Trigger: GGTGCTAGGTGGACCGAGCAAAAGACTCAGTGGATG...AGCCAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS TCA 90 bp TTCACTGCAGCCCCCGCCGATCATGAAACGAAACTCCTGGAGGTTTaGGACACCATGGAAGTGAACAAAAGCTCCAGCAACCACAAAGAT +
Preference number: 5 (lower is better)
Translates to: FTAAPADHETKLLEV*DTMEVNKSSSNHKD
Trigger: ATCTTTGTGGTTGCTGGAGCTTTTGTTCACTTCCATGGTGTCTCAAACCTCCAGGAGTTTCGTTTCATGATCGGCGGGGGCTGCAGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS TCA 90 bp TGGGCTTGTAAGAGAGGGGACATGCCCATAAAGCCCTCATCTTCCTaGGGAGCTTCATCACTGTATTCATGTTCCTCAGAGCTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: WACKRGDMPIKPSSS*GASSLYSCSSELCK
Trigger: CTTGCAGAGCTCTGAGGAACATGAATACAGTGATGAAGCTCCTCAGGAAGATGAGGGCTTTATGGGCATGTCCCCTCTCTTACAAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535774.1
ENST00000644988.1
CDS-3UTR CAA 90 bp AGGAAGGGTCTACCAATCTATGTAGATGAGCTCAGGAGAAACCTGGACACGTCACTTCAGGATAGTGAGTaGATCCGCGTGTCTCGGACT +
Preference number: 5 (lower is better)
Translates to: RKGLPIYVDELRRNLDTSLQDSE*IRVSRT
Trigger: AGTCCGAGACACGCGGATCAACTCACTATCCTGAAG...TGACGTGTCCAGGTTTCTCCTGAGCTCATCTACATAGATTGGTAGACCCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp GTCTTTTGCTCGGTCCACCTAGCACCTAGGACAGTGACCTTATCCAGAACCAAACCAATCGGTTTTCTGTaGGCTCGTTCATGGGATACC +
Preference number: 5 (lower is better)
Translates to: VFCSVHLAPRTVTLSRTKPIGFL*ARSWDT
Trigger: GGTATCCCATGAACGAGCCAACAGAAAACCGATTGG...TTTGGTTCTGGATAAGGTCACTGTCCTAGGTGCTAGGTGGACCGAGCAAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCCAGAGCTCCACAGCAAGGATATGGAAAACTGTCCCATCCCTCTAATAAGACTGAGGCTGTCAAAGTTTaGGGGCTCCTCTGGTACTGG +
Preference number: 5 (lower is better)
Translates to: SRAPQQGYGKLSHPSNKTEAVKV*GLLWYW
Trigger: CCAGTACCAGAGGAGCCCCAAAACTTTGACAGCCTC...AGTCTTATTAGAGGGATGGGACAGTTTTCCATATCCTTGCTGTGGAGCTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGGCTAGTTTGCCAAGGGTCTaGCAGAGCCCGCAATCAGTA +
Preference number: 5 (lower is better)
Translates to: SVSADNSVLQLALRVLLASLPRV*QSPQSV
Trigger: TACTGATTGCGGGCTCTGCAAGACCCTTGGCAAACT...AGCCAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp GGTTCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGAGTTTGCCAAGGGTCTaGCAGAGCCCGCAATCAGTA +
Preference number: 5 (lower is better)
Translates to: GSVSADNSVLQLALRVLLSLPRV*QSPQSV
Trigger: TACTGATTGCGGGCTCTGCAAGACCCTTGGCAAACT...CAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCTCATTTGTGGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCATTTCATCCACTGAGTCTTTaGCTCGGTCCACCTAGCACC +
Preference number: 5 (lower is better)
Translates to: SHLWLAPMPRTMSEKGPFHPLSL*LGPPST
Trigger: GGTGCTAGGTGGACCGAGCAAAAGACTCAGTGGATG...AAATGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS TCA 90 bp TGGGCTTGTAAGAGAGGGGACATGCCCATAAAGCCCTCATCTTCCTaGGGAGCTTCATCACTGTATTCATGTTCCTCAGAGCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: WACKRGDMPIKPSSS*GASSLYSCSSELLL
Trigger: AAGAAGCAGCTCTGAGGAACATGAATACAGTGATGAAGCTCCTCAGGAAGATGAGGGCTTTATGGGCATGTCCCCTCTCTTACAAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543456.1
ENST00000647197.1
CDS GCA 90 bp ATACTGAGGGGTGGCAAACATGTCCCACTGGGAGACTATAATGGCTaGAATGCCCAGCACACAGATGACAATCAAGTAGATGAAGCAAGG +
Preference number: 5 (lower is better)
Translates to: ILRGGKHVPLGDYNG*NAQHTDDNQVDEAR
Trigger: CCTTGCTTCATCTACTTGATTGTCATCTGTGTGCTGGGCATTGCAGCCATTATAGTCTCCCAGTGGGACATGTTTGCCACCCCTCAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCTCATTTGTGGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCATTTTTCTGTCCCCTCTTCTaGGGAGAATGGACCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SHLWLAPMPRTMSEKGPFFCPLF*GEWTFR
Trigger: CCTGAAGGTCCATTCTCCCAAGAAGAGGGGACAGAA...AAATGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp ACCAAGACACTGTACATTCCGGGGCTATCACCTGATCCTACAGTCACTTTTTGTTCGTGTACCATCCAGTaGGTGCCCTTTTCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: TKTLYIPGLSPDPTVTFCSCTIQ*VPFSEP
Trigger: AGGCTCAGAAAAGGGCACCAACTGGATGGTACACGA...ACAAAAAGTGACTGTAGGATCAGGTGATAGCCCCGGAATGTACAGTGTCTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp CTAAGACTCGAGCACTATTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCGGGCTCCAAATCTCCTaGGTGGCTGTCATTATCACC +
Preference number: 5 (lower is better)
Translates to: LRLEHYFGGSPMGQDQNSGLQIS*VAVIIT
Trigger: GGTGATAATGACAGCCACCAAGGAGATTTGGAGCCC...GGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAATAGTGCTCGAGTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp CTAAGACTCGAGCACTATTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCACGTCAGAATCTCATTaGTGGCTGGCTCCCATGCCA +
Preference number: 5 (lower is better)
Translates to: LRLEHYFGGSPMGQDQNSTSESH*WLAPMP
Trigger: TGGCATGGGAGCCAGCCACAAATGAGATTCTGACGT...GGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAATAGTGCTCGAGTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp GGTTCAGTGAGTGCTGACAACTCCGTACTACAACTGGCTTTAAGAGTTCTGCTGACCTTTTGCTGGAGATaGCAAGGGCAAGGGAGGAAA +
Preference number: 5 (lower is better)
Translates to: GSVSADNSVLQLALRVLLTFCWR*QGQGRK
Trigger: TTTCCTCCCTTGCCCTTGCAATCTCCAGCAAAAGGT...CAGCAGAACTCTTAAAGCCAGTTGTAGTACGGAGTTGTCAGCACTCACTGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCTCATTTGTGGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCATTTACCTTTTGCTGGAGATaGCAAGGGCAAGGGAGGAAA +
Preference number: 5 (lower is better)
Translates to: SHLWLAPMPRTMSEKGPFTFCWR*QGQGRK
Trigger: TTTCCTCCCTTGCCCTTGCAATCTCCAGCAAAAGGT...AAATGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp AGGAAGGGTCTACCAATCTATGTAGATGAGCTCAGGAGAAACCTGGACACGTCAAGGGTTTGTGCTATGTaGAACCAGATCCTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: RKGLPIYVDELRRNLDTSRVCAM*NQILPA
Trigger: AGCTGGAAGGATCTGGTTCAACATAGCACAAACCCT...TGACGTGTCCAGGTTTCTCCTGAGCTCATCTACATAGATTGGTAGACCCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS TCA 90 bp TGCAAGAGGAAGTCATTATCCTTGAGCCAGTCTGGTAGTACATCATaGGGGATCACTCGCCACCGACCTTCCCATACCTTACAAACAAAT +
Preference number: 5 (lower is better)
Translates to: CKRKSLSLSQSGSTS*GITRHRPSHTLQTN
Trigger: ATTTGTTTGTAAGGTATGGGAAGGTCGGTGGCGAGTGATCCCTCATGATGTACTACCAGACTGGCTCAAGGATAATGACTTCCTCTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357103.5
ENST00000535774.1
ENST00000544470.1
ENST00000644988.1
ENST00000645126.2
ENST00000646614.1
CDS-3UTR CAA 90 bp ATGGAGTCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGGATCAGAAGCCAGTTaGCCAAGGGTCTTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: MESSQVFDDSNLRLEHYFGSEAS*PRVLQS
Trigger: GCTCTGCAAGACCCTTGGCAAACTGGCTTCTGATCC...AAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGACTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCTCATTTGTGGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCATTTCCTTTAGAAGGCATCTaGGTGCACCAAGACACTGTA +
Preference number: 5 (lower is better)
Translates to: SHLWLAPMPRTMSEKGPFPLEGI*VHQDTV
Trigger: TACAGTGTCTTGGTGCACCAAGATGCCTTCTAAAGG...AAATGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGGTGGTACGTCAGAATCTCATTaGTGGCTGGCTCCCATGCCA +
Preference number: 5 (lower is better)
Translates to: SSQVFDDSNLRLEHYFGGTSESH*WLAPMP
Trigger: TGGCATGGGAGCCAGCCACAAATGAGATTCTGACGT...ACCACCAAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGGTGGTGACTCGAGCACTATTTaGGTGGTTCACCTATGGGCC +
Preference number: 5 (lower is better)
Translates to: SSQVFDDSNLRLEHYFGGDSSTI*VVHLWA
Trigger: GGCCCATAGGTGAACCACCAAAATAGTGCTCGAGTC...ACCACCAAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGGTGGTCCTAGATCCCACCTTTaGCTGGAGATTGCAAGGGCA +
Preference number: 5 (lower is better)
Translates to: SSQVFDDSNLRLEHYFGGPRSHL*LEIARA
Trigger: TGCCCTTGCAATCTCCAGCAAAAGGTGGGATCTAGG...ACCACCAAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCTCATTTGTGGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCATTTAGAATAAGCCAGGGTTaGGGCTATGTCTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SHLWLAPMPRTMSEKGPFRISQG*GYVSFS
Trigger: AGAAAAGGAGACATAGCCCAAACCCTGGCTTATTCT...AAATGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TTTTGGTGGTTCACCTATGGGCCAAGATCAGAATTCCATGAACCAGATCCTTTCCCTTTAGAAGGCATCTaGGTGCACCAAGACACTGTA +
Preference number: 5 (lower is better)
Translates to: FWWFTYGPRSEFHEPDPFPLEGI*VHQDTV
Trigger: TACAGTGTCTTGGTGCACCAAGATGCCTTCTAAAGG...GAAAGGATCTGGTTCATGGAATTCTGATCTTGGCCCATAGGTGAACCACCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCACTCCCTGGCAATAACATACCATTGTATTTAAAATGCCACACCACTCTTATCGGGCTCCAAATCTCCTaGGTGGCTGTCATTATCACC +
Preference number: 5 (lower is better)
Translates to: SLPGNNIPLYLKCHTTLIGLQIS*VAVIIT
Trigger: GGTGATAATGACAGCCACCAAGGAGATTTGGAGCCC...GATAAGAGTGGTGTGGCATTTTAAATACAATGGTATGTTATTGCCAGGGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGGTGGTGAAACTCCTGGAGGTTaGAGACACCATGGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: SSQVFDDSNLRLEHYFGGETPGG*RHHGSE
Trigger: TTCACTTCCATGGTGTCTCAAACCTCCAGGAGTTTC...ACCACCAAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCACTCCCTGGCAATAACATACCATTGTATTTAAAATGCCACACCACTCTTATCCCAATCGGTTTTCTGTaGGCTCGTTCATGGGATACC +
Preference number: 5 (lower is better)
Translates to: SLPGNNIPLYLKCHTTLIPIGFL*ARSWDT
Trigger: GGTATCCCATGAACGAGCCAACAGAAAACCGATTGG...GATAAGAGTGGTGTGGCATTTTAAATACAATGGTATGTTATTGCCAGGGAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCTCATTTGTGGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCATTTGTAGATGAAGCAAGGTaGTGGATTACAGTAGAAAGA +
Preference number: 5 (lower is better)
Translates to: SHLWLAPMPRTMSEKGPFVDEAR*WITVER
Trigger: TCTTTCTACTGTAATCCACAACCTTGCTTCATCTAC...AAATGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp ATGGAGTCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGAAACTCCTGGAGGTTaGAGACACCATGGAAGTGAA +
Preference number: 5 (lower is better)
Translates to: MESSQVFDDSNLRLEHYFETPGG*RHHGSE
Trigger: TTCACTTCCATGGTGTCTCAAACCTCCAGGAGTTTC...AAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGACTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp ATGACCGAAGAGCAAGTCTGGCTTCTGATACGTGCTGTTGCTCCCAAGAAACTAATTTTTCCTAAGGGTTaGTGCTATGTTGAACCAGAT +
Preference number: 5 (lower is better)
Translates to: MTEEQVWLLIRAVAPKKLIFPKG*CYVEPD
Trigger: ATCTGGTTCAACATAGCACAAACCCTTAGGAAAAAT...TAGTTTCTTGGGAGCAACAGCACGTATCAGAAGCCAGACTTGCTCTTCGGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp AGGAAGGGTCTACCAATCTATGTAGATGAGCTCAGGAGAAACCTGGACACGTCAATTTTTCCTAAGGGTTaGTGCTATGTTGAACCAGAT +
Preference number: 5 (lower is better)
Translates to: RKGLPIYVDELRRNLDTSIFPKG*CYVEPD
Trigger: ATCTGGTTCAACATAGCACAAACCCTTAGGAAAAAT...TGACGTGTCCAGGTTTCTCCTGAGCTCATCTACATAGATTGGTAGACCCTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCTCATTTGTGGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCATTTAACAGTGTGTGGTACTaGCATGTTTCATTCTATACA +
Preference number: 5 (lower is better)
Translates to: SHLWLAPMPRTMSEKGPFNSVWY*HVSFYT
Trigger: TGTATAGAATGAAACATGCAAGTACCACACACTGTT...AAATGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCTCATTTGTGGCTGGCTCCCATGCCAAGAACTATGTCAGAGAAAGGTCCATTTGGCAATAACATACCATaGTATTTAAAATGCCACACC +
Preference number: 5 (lower is better)
Translates to: SHLWLAPMPRTMSEKGPFGNNIP*YLKCHT
Trigger: GGTGTGGCATTTTAAATACAATGGTATGTTATTGCC...AAATGGACCTTTCTCTGACATAGTTCTTGGCATGGGAGCCAGCCACAAATGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTGGTGGTGGCAATAACATACCATaGTATTTAAAATGCCACACC +
Preference number: 5 (lower is better)
Translates to: SSQVFDDSNLRLEHYFGGGNNIP*YLKCHT
Trigger: GGTGTGGCATTTTAAATACAATGGTATGTTATTGCC...ACCACCAAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp ATGGAGTCATCCCAAGTCTTTGATGACAGTAACCTAAGACTCGAGCACTATTTTAACAGTGTGTGGTACTaGCATGTTTCATTCTATACA +
Preference number: 5 (lower is better)
Translates to: MESSQVFDDSNLRLEHYFNSVWY*HVSFYT
Trigger: TGTATAGAATGAAACATGCAAGTACCACACACTGTT...AAAATAGTGCTCGAGTCTTAGGTTACTGTCATCAAAGACTTGGGATGACTCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS-3UTR CAA 90 bp TACAGTCACTTTTTGTGCAAAATTCAAACAGTGTGTGGTACTTGCATGTTTCATGTAGATGAAGCAAGGTaGTGGATTACAGTAGAAAGA +
Preference number: 5 (lower is better)
Translates to: YSHFLCKIQTVCGTCMFHVDEAR*WITVER
Trigger: TCTTTCTACTGTAATCCACAACCTTGCTTCATCTAC...ATGAAACATGCAAGTACCACACACTGTTTGAATTTTGCACAAAAAGTGACTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS TCA 72 bp GTTCGGGGATCCGGGCAGCATACAGGGCAGCTCCTGTaGTGTAGAGGCTGGCCATCAGCATCAACCAGCCTA +
Preference number: 6 (lower is better)
Translates to: VRGSGQHTGQLL*CRGWPSASTSL
Trigger: TAGGCTGGTTGATGCTGATGGCCAGCCTCTACATCACAGGAGCTGCCCTGTATGCTGCCCGGATCCCCGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS GCA 72 bp CAGGCCCGGAAAGAAGGCATAGGAGGCCGGTGTCCATaGAAGAGGAAGTCATTATCCTTGAGCCAGTCTGGT +
Preference number: 6 (lower is better)
Translates to: QARKEGIGGRCP*KRKSLSLSQSG
Trigger: ACCAGACTGGCTCAAGGATAATGACTTCCTCTTGCATGGACACCGGCCTCCTATGCCTTCTTTCCGGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357103.5
ENST00000535774.1
ENST00000544470.1
ENST00000644988.1
ENST00000645126.2
ENST00000646614.1
CDS TCA 72 bp ACAGTGCATCCTCTTCACTGCAGCCCCCGCCGATCATaGAACGAAACTCCTGGAGGTTTGAGACACCATGGA +
Preference number: 6 (lower is better)
Translates to: TVHPLHCSPRRS*NETPGGLRHHG
Trigger: TCCATGGTGTCTCAAACCTCCAGGAGTTTCGTTTCATGATCGGCGGGGGCTGCAGTGAAGAGGATGCACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS CAA 72 bp GCTCTGGAGTCCTGCTGCACCCCAATCGGTTTTCTGTaGGCTCGTTCATGGGATACCCAAGCCTTTCTTACA +
Preference number: 6 (lower is better)
Translates to: ALESCCTPIGFL*ARSWDTQAFLT
Trigger: TGTAAGAAAGGCTTGGGTATCCCATGAACGAGCCAACAGAAAACCGATTGGGGTGCAGCAGGACTCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357103.5
ENST00000537545.1
ENST00000643427.1
ENST00000645126.2
CDS TCA 72 bp GAGGCCGGTGTCCATGCAAGAGGAAGTCATTATCCTTaGGCCAGTCTGGTAGTACATCATGAGGGATCACTC +
Preference number: 6 (lower is better)
Translates to: EAGVHARGSHYP*ASLVVHHEGSL
Trigger: GAGTGATCCCTCATGATGTACTACCAGACTGGCTCAAGGATAATGACTTCCTCTTGCATGGACACCGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357103.5
ENST00000535774.1
ENST00000544470.1
ENST00000644988.1
ENST00000645126.2
ENST00000646614.1
CDS CCA 72 bp CTCTGGAGTCCTGCTGCACCCCAATCGGTTTTCTGTTaGCTCGTTCATGGGATACCCAAGCCTTTCTTACAA +
Preference number: 6 (lower is better)
Translates to: LWSPAAPQSVFC*LVHGIPKPFLQ
Trigger: TTGTAAGAAAGGCTTGGGTATCCCATGAACGAGCCAACAGAAAACCGATTGGGGTGCAGCAGGACTCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357103.5
ENST00000537545.1
ENST00000643427.1
ENST00000645126.2
CDS TCA 72 bp AAGAGAGGGGACATGCCCATAAAGCCCTCATCTTCCTaGGGAGCTTCATCACTGTATTCATGTTCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: KRGDMPIKPSSS*GASSLYSCSSE
Trigger: CTCTGAGGAACATGAATACAGTGATGAAGCTCCTCAGGAAGATGAGGGCTTTATGGGCATGTCCCCTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000357103.5
ENST00000535774.1
ENST00000537545.1
ENST00000543456.1
ENST00000643427.1
ENST00000644988.1
ENST00000645126.2
ENST00000647197.1
CDS TCA 72 bp AAGTCATTATCCTTGAGCCAGTCTGGTAGTACATCATaGGGGATCACTCGCCACCGACCTTCCCATACCTTA +
Preference number: 6 (lower is better)
Translates to: KSLSLSQSGSTS*GITRHRPSHTL
Trigger: TAAGGTATGGGAAGGTCGGTGGCGAGTGATCCCTCATGATGTACTACCAGACTGGCTCAAGGATAATGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357103.5
ENST00000535774.1
ENST00000544470.1
ENST00000644988.1
ENST00000645126.2
ENST00000646614.1
CDS GCA 72 bp GGTGGCAAACATGTCCCACTGGGAGACTATAATGGCTaGAATGCCCAGCACACAGATGACAATCAAGTAGAT +
Preference number: 6 (lower is better)
Translates to: GGKHVPLGDYNG*NAQHTDDNQVD
Trigger: ATCTACTTGATTGTCATCTGTGTGCTGGGCATTGCAGCCATTATAGTCTCCCAGTGGGACATGTTTGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357103.5
ENST00000645126.2
CDS CAA 90 bp TTATATCTGGCTCTGGAGTCCTGCTGCACCCCAATCGGTTTTCTGTaGGCTCGTTCATGGGATACCCAAGCCTTTCTTACAAATAGATCT +
Preference number: 6 (lower is better)
Translates to: LYLALESCCTPIGFL*ARSWDTQAFLTNRS
Trigger: AGATCTATTTGTAAGAAAGGCTTGGGTATCCCATGAACGAGCCAACAGAAAACCGATTGGGGTGCAGCAGGACTCCAGAGCCAGATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357103.5
ENST00000537545.1
ENST00000643427.1
ENST00000645126.2
CDS CAA 90 bp CTCCAGCATCAGCTGCGTATCTTAGAATTTCTGTTCTCTCCATTCTaGGGGTATCACACTACTCCACAGGAGGGTAGAGCCCTTTATCTT +
Preference number: 6 (lower is better)
Translates to: LQHQLRILEFLFSPF*GYHTTPQEGRALYL
Trigger: AAGATAAAGGGCTCTACCCTCCTGTGGAGTAGTGTGATACCCCAAGAATGGAGAGAACAGAAATTCTAAGATACGCAGCTGATGCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537545.1
ENST00000643427.1
CDS GCA 72 bp GGAGCTTCATCACTGTATTCATGTTCCTCAGAGCTCTaGAAGGCAATCACAGAAACAGTCAAGGACAGAGAC +
Preference number: 6 (lower is better)
Translates to: GASSLYSCSSEL*KAITETVKDRD
Trigger: GTCTCTGTCCTTGACTGTTTCTGTGATTGCCTTGCAGAGCTCTGAGGAACATGAATACAGTGATGAAGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535774.1
ENST00000644988.1
CDS CCA 72 bp TGCTGCACCCCAATCGGTTTTCTGTTGGCTCGTTCATaGGATACCCAAGCCTTTCTTACAAATAGATCTGTC +
Preference number: 6 (lower is better)
Translates to: CCTPIGFLLARS*DTQAFLTNRSV
Trigger: GACAGATCTATTTGTAAGAAAGGCTTGGGTATCCCATGAACGAGCCAACAGAAAACCGATTGGGGTGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357103.5
ENST00000537545.1
ENST00000643427.1
ENST00000645126.2
CDS CCA 72 bp ACAGATGCCTCTAAAATGGGCTCCAAATCTCCTTGGTaGCTGTCATTATCACCTCTTCGTGTACCATCCAGT +
Preference number: 6 (lower is better)
Translates to: TDASKMGSKSPW*LSLSPLRVPSS
Trigger: ACTGGATGGTACACGAAGAGGTGATAATGACAGCCACCAAGGAGATTTGGAGCCCATTTTAGAGGCATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357103.5
ENST00000537545.1
ENST00000643427.1
ENST00000645126.2
CDS CCA 72 bp AGAACAGATGCCTCTAAAATGGGCTCCAAATCTCCTTaGTGGCTGTCATTATCACCTCTTCGTGTACCATCC +
Preference number: 6 (lower is better)
Translates to: RTDASKMGSKSP*WLSLSPLRVPS
Trigger: GGATGGTACACGAAGAGGTGATAATGACAGCCACCAAGGAGATTTGGAGCCCATTTTAGAGGCATCTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357103.5
ENST00000537545.1
ENST00000643427.1
ENST00000645126.2
CDS GCA 72 bp AATAGCAGCGTGGGAGCCACGGGAAAACTTCTCCTTTaGTCTTTAATGATTCACTTAAAAACCACCTCACAA +
Preference number: 6 (lower is better)
Translates to: NSSVGATGKLLL*SLMIHLKTTSQ
Trigger: TTGTGAGGTGGTTTTTAAGTGAATCATTAAAGAGCAAAGGAGAAGTTTTCCCGTGGCTCCCACGCTGCTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540974.1
ENST00000642176.1
CDS CAA 72 bp ATTCTTTTACATATGGCTCAGTTATCCCAGCACCATTaGTTGGAAAGACTATTCTTTCCTCTACAGTATTCT +
Preference number: 6 (lower is better)
Translates to: ILLHMAQLSQHH*LERLFFPLQYS
Trigger: AGAATACTGTAGAGGAAAGAATAGTCTTTCCAACAAATGGTGCTGGGATAACTGAGCCATATGTAAAAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544470.1
ENST00000646614.1
CDS CAA 72 bp GACTGGGAGCCAAATGACACAATCAATACATTTCCCTaGTGGAATTATAATGAAATTCTTAAGGTCAAAACA +
Preference number: 6 (lower is better)
Translates to: DWEPNDTINTFP*WNYNEILKVKT
Trigger: TGTTTTGACCTTAAGAATTTCATTATAATTCCACAAGGGAAATGTATTGATTGTGTCATTTGGCTCCCAGTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535774.1
ENST00000644988.1