RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADIPOQ (Homo sapiens)

Ensembl gene IDs: ENSG00000181092

Ensembl transcript IDs: ENST00000320741.7, ENST00000444204.2

Found 303 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGGCACACAACTCAGCCAGAGCAATGAGATGCAAGGTTACACTTaGTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTCTTTGGGC +
Preference number: 1 (lower is better)
Translates to: TGTQLSQSNEMQGYT*WGIWERELPLSSLG
Trigger: GCCCAAAGAGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCTCATTGCTCTGGCTGAGTTGTGTGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR CCA 90 bp GGCACACAACTCAGCCAGAGCAATGAGATGCAAGGTTACACTTGCTaGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTCTTTGGGCATC +
Preference number: 1 (lower is better)
Translates to: GTQLSQSNEMQGYTC*GIWERELPLSSLGI
Trigger: GATGCCCAAAGAGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCTCATTGCTCTGGCTGAGTTGTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR GCA 90 bp GTGATTGGTCAGAAACAGGCACACAACTCAGCCAGAGCAATGAGATaGAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTC +
Preference number: 1 (lower is better)
Translates to: VIGQKQAHNSARAMR*KVTLAGASGKESFL
Trigger: GAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCTCATTGCTCTGGCTGAGTTGTGTGCCTGTTTCTGACCAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR TCA 90 bp GGAAAGAGAGCTTCCTCTCTCCTCTTTGGGCATCACCAGAAAACATaGTGTCCATTTAGCCAGATGGTGTGGCTTGGGGATACGAGAGCT +
Preference number: 1 (lower is better)
Translates to: GKRASSLLFGHHQKT*CPFSQMVWLGDTRA
Trigger: AGCTCTCGTATCCCCAAGCCACACCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGGAAGCTCTCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR CCA 90 bp GTTTTAATTCATGAGGAAGGCAAATTCAATGGCTCTCAGGTGAGGTaGGAAACAGACACCTACCAACACTCCAAAGAGAACATGTACCTC +
Preference number: 1 (lower is better)
Translates to: VLIHEEGKFNGSQVR*ETDTYQHSKENMYL
Trigger: GAGGTACATGTTCTCTTTGGAGTGTTGGTAGGTGTCTGTTTCCCACCTCACCTGAGAGCCATTGAATTTGCCTTCCTCATGAATTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR GCA 90 bp CTTAACTCTCTCAGCCTCAGGATACAATCTGTAAAAACAGGAGAATaGTTGTTCCCTGTGCCTTATAGGATTGATATGAGCATCAGGAGA +
Preference number: 1 (lower is better)
Translates to: LNSLSLRIQSVKTGE*LFPVPYRIDMSIRR
Trigger: TCTCCTGATGCTCATATCAATCCTATAAGGCACAGGGAACAAGCATTCTCCTGTTTTTACAGATTGTATCCTGAGGCTGAGAGAGTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR TCA 90 bp TATTTTGGGTTTTCTGTTGTGAATGACATTCACAACACAGAGTTCTaGCTAACACAAGGCTTACTCTCACCTCTTCATCCCTCTCTAAAC +
Preference number: 1 (lower is better)
Translates to: YFGFSVVNDIHNTEF*LTQGLLSPLHPSLN
Trigger: GTTTAGAGAGGGATGAAGAGGTGAGAGTAAGCCTTGTGTTAGTCAGAACTCTGTGTTGTGAATGTCATTCACAACAGAAAACCCAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR TCA 90 bp TTGCTTACAGTAGTTTGCATAATATTTTGGGTTTTCTGTTGTGAATaGCATTCACAACACAGAGTTCTGACTAACACAAGGCTTACTCTC +
Preference number: 1 (lower is better)
Translates to: LLTVVCIIFWVFCCE*HSQHRVLTNTRLTL
Trigger: GAGAGTAAGCCTTGTGTTAGTCAGAACTCTGTGTTGTGAATGTCATTCACAACAGAAAACCCAAAATATTATGCAAACTACTGTAAGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR TCA 90 bp AAGAAAGGAAGGAAGAAAGAAAGGAAGGAAGAAAGAAAAGGAAGTTaGGTGCGTATGTTATTTTTAGACAAAGTAGACTTCAGAACACAG +
Preference number: 1 (lower is better)
Translates to: KKGRKKERKEERKGS*VRMLFLDKVDFRTQ
Trigger: CTGTGTTCTGAAGTCTACTTTGTCTAAAAATAACATACGCACTCAACTTCCTTTTCTTTCTTCCTTCCTTTCTTTCTTCCTTCCTTTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CCA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACGACTTTGGGGCTGTTTaGCCTGGAGGAGGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDDFGAV*PGGGSE
Trigger: CTCAGAGCCTCCTCCAGGCCAAACAGCCCCAAAGTC...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR TCA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACATCTGGTCATGTTTGTaGAGCTCCCCAGGACTGGGA +
Preference number: 2 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDIWSCL*SSPGLG
Trigger: TCCCAGTCCTGGGGAGCTTCACAAACATGACCAGAT...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR CAA 90 bp CACCTGAAGTCTCAGCTACTCGGGAGGCTGAGGCACAATAATTGCTaGGACCCAGGAGAAGGAGGCTGCAGTGAGCCGAGGTCGTGTCAC +
Preference number: 2 (lower is better)
Translates to: HLKSQLLGRLRHNNC*DPGEGGCSEPRSCH
Trigger: GTGACACGACCTCGGCTCACTGCAGCCTCCTTCTCCTGGGTCCAAGCAATTATTGTGCCTCAGCCTCCCGAGTAGCTGAGACTTCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR TCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTCTGGCCAGGTGGCCTTaGGGAACAGGGATGAGTTCG +
Preference number: 2 (lower is better)
Translates to: RCKVTLAGASGKESFLSPLARWP*GTGMSS
Trigger: CGAACTCATCCCTGTTCCTCAAGGCCACCTGGCCAG...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CCA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACATTAGCCATGTGTGGTaGAATGCACCTGAAGTCTCA +
Preference number: 2 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDISHVW*NAPEVS
Trigger: TGAGACTTCAGGTGCATTCCACCACACATGGCTAAT...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTGACTTTGGGGCTGTTTaGCCTGGAGGAGGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: RCKVTLAGASGKESFLSPDFGAV*PGGGSE
Trigger: CTCAGAGCCTCCTCCAGGCCAAACAGCCCCAAAGTC...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR GCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGCCAGGAGAAGGAGGCTaGAGTGAGCCGAGGTCGTGT +
Preference number: 2 (lower is better)
Translates to: PLSSLGITRKHDVHLARWPGEGG*SEPRSC
Trigger: ACACGACCTCGGCTCACTGCAGCCTCCTTCTCCTGG...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTCATCAGAGAAGCTCCTaGCCAGGTGGCCTTGAGGAA +
Preference number: 2 (lower is better)
Translates to: RCKVTLAGASGKESFLSPHQRSS*PGGLEE
Trigger: TTCCTCAAGGCCACCTGGCCAGGAGCTTCTCTGATG...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR TCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCATCTGGTCATGTTTGTaGAGCTCCCCAGGACTGGGA +
Preference number: 2 (lower is better)
Translates to: LTSVSLRPLLASVDSLCAIWSCL*SSPGLG
Trigger: TCCCAGTCCTGGGGAGCTTCACAAACATGACCAGAT...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR TCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTAGAAGGAGGCTGCAGTaGGCCGAGGTCGTGTCACTG +
Preference number: 2 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPRRRLQ*AEVVSL
Trigger: CAGTGACACGACCTCGGCTCACTGCAGCCTCCTTCT...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR GCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTCCAGGAGAAGGAGGCTaGAGTGAGCCGAGGTCGTGT +
Preference number: 2 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPPGEGG*SEPRSC
Trigger: ACACGACCTCGGCTCACTGCAGCCTCCTTCTCCTGG...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR GCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCAGTAAGCCGAGATCATaGCACTGCACTCTAGCCTGG +
Preference number: 2 (lower is better)
Translates to: LTSVSLRPLLASVDSLCASKPRS*HCTLAW
Trigger: CCAGGCTAGAGTGCAGTGGCATGATCTCGGCTTACT...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTCACTGCACTCTAGCCTaGCAACAGAGGGAAACTCCA +
Preference number: 2 (lower is better)
Translates to: RCKVTLAGASGKESFLSPHCTLA*QQRETP
Trigger: TGGAGTTTCCCTCTGTTGCCAGGCTAGAGTGCAGTG...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR TCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCCTTGAGGAACAGGGATaGGTTCGGCACTTAGAGATG +
Preference number: 2 (lower is better)
Translates to: LTSVSLRPLLASVDSLCALEEQG*VRHLEM
Trigger: CATCTCTAAGTGCCGAACTCATCCCTGTTCCTCAAG...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCGGAAGGCAAATTCAATaGCTCTCAGGTGAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: LTSVSLRPLLASVDSLCAGRQIQ*LSGEVG
Trigger: TCCCACCTCACCTGAGAGCCATTGAATTTGCCTTCC...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGCATCAGAGAAGCTCCTaGCCAGGTGGCCTTGAGGAA +
Preference number: 2 (lower is better)
Translates to: PLSSLGITRKHDVHLARWHQRSS*PGGLEE
Trigger: TTCCTCAAGGCCACCTGGCCAGGAGCTTCTCTGATG...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGAAGCACAGTCCTTCCTaGGCAGTTGCCTCTAGCCTG +
Preference number: 2 (lower is better)
Translates to: PLSSLGITRKHDVHLARWKHSPS*AVASSL
Trigger: CAGGCTAGAGGCAACTGCCCAGGAAGGACTGTGCTT...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR TCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCCCACAGCTCTGGGTTTaGTTTCTAGCACTGTCACTT +
Preference number: 2 (lower is better)
Translates to: LTSVSLRPLLASVDSLCAPQLWV*FLALSL
Trigger: AAGTGACAGTGCTAGAAATCAAACCCAGAGCTGTGG...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR TCA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCAGAAGGAGGCTGCAGTaGGCCGAGGTCGTGTCACTG +
Preference number: 2 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTRRRLQ*AEVVSL
Trigger: CAGTGACACGACCTCGGCTCACTGCAGCCTCCTTCT...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR GCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCTCTCTGAGGAAGCTCTaGTTGGGGGAGGTTTTAATT +
Preference number: 2 (lower is better)
Translates to: LTSVSLRPLLASVDSLCASLRKL*LGEVLI
Trigger: AATTAAAACCTCCCCCAAGCAGAGCTTCCTCAGAGA...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGGGAAGGCAAATTCAATaGCTCTCAGGTGAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: PLSSLGITRKHDVHLARWGRQIQ*LSGEVG
Trigger: TCCCACCTCACCTGAGAGCCATTGAATTTGCCTTCC...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTATTAGCCATGTGTGGTaGAATGCACCTGAAGTCTCA +
Preference number: 2 (lower is better)
Translates to: RCKVTLAGASGKESFLSPISHVW*NAPEVS
Trigger: TGAGACTTCAGGTGCATTCCACCACACATGGCTAAT...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR TCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCTGGCAAAATAAAAAGTaGGATATCGACTGGGCATGG +
Preference number: 2 (lower is better)
Translates to: LTSVSLRPLLASVDSLCAWQNKK*DIDWAW
Trigger: CCATGCCCAGTCGATATCTCACTTTTTATTTTGCCA...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CCA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCAAGCACAGTCCTTCCTaGGCAGTTGCCTCTAGCCTG +
Preference number: 2 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTKHSPS*AVASSL
Trigger: CAGGCTAGAGGCAACTGCCCAGGAAGGACTGTGCTT...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCTACTCAAGGAGACAATaGCTTCAGAATTCCTCCATG +
Preference number: 2 (lower is better)
Translates to: LTSVSLRPLLASVDSLCAYSRRQ*LQNSSM
Trigger: CATGGAGGAATTCTGAAGCCATTGTCTCCTTGAGTA...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR CAA 90 bp ACCATTAATCCTGAAATCTTGACCTCAGTTTCTCTCAGGCCTCTTTaGGCCTCAGTTGACTCTCTCTGTGCCTCTGGTTCCACAAAGGAA +
Preference number: 2 (lower is better)
Translates to: TINPEILTSVSLRPL*ASVDSLCASGSTKE
Trigger: TTCCTTTGTGGAACCAGAGGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAAGATTTCAGGATTAATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR TCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTCCACAGCTCTGGGTTTaGTTTCTAGCACTGTCACTT +
Preference number: 2 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPPQLWV*FLALSL
Trigger: AAGTGACAGTGCTAGAAATCAAACCCAGAGCTGTGG...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR TCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCTTGGGTTTTCTGTTGTaGATGACATTCACAACACAG +
Preference number: 2 (lower is better)
Translates to: LTSVSLRPLLASVDSLCALGFLL*MTFTTQ
Trigger: CTGTGTTGTGAATGTCATTCACAACAGAAAACCCAA...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR GCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCGGACAGGTATTATTTTaGATCTATCATCCACTCTCC +
Preference number: 2 (lower is better)
Translates to: LTSVSLRPLLASVDSLCAGQVLF*IYHPLS
Trigger: GGAGAGTGGATGATAGATGCAAAATAATACCTGTCC...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTCATCAGGAGAGACAGTaGGCACAAAATAGCACTGTC +
Preference number: 2 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPHQERQ*AQNSTV
Trigger: GACAGTGCTATTTTGTGCCCACTGTCTCTCCTGATG...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTATTACATGCAGAGACTaGAATGGAGTTAATTCTGGG +
Preference number: 2 (lower is better)
Translates to: RCKVTLAGASGKESFLSPITCRD*NGVNSG
Trigger: CCCAGAATTAACTCCATTCCAGTCTCTGCATGTAAT...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCATTACATGCAGAGACTaGAATGGAGTTAATTCTGGG +
Preference number: 2 (lower is better)
Translates to: LTSVSLRPLLASVDSLCAITCRD*NGVNSG
Trigger: CCCAGAATTAACTCCATTCCAGTCTCTGCATGTAAT...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR CAA 90 bp AGACAGGACGTCATCATAGAACCACTTTCTCTGAGGAAGCTCTGCTaGGGGGAGGTTTTAATTCATGAGGAAGGCAAATTCAATGGCTCT +
Preference number: 2 (lower is better)
Translates to: RQDVIIEPLSLRKLC*GEVLIHEEGKFNGS
Trigger: AGAGCCATTGAATTTGCCTTCCTCATGAATTAAAACCTCCCCCAAGCAGAGCTTCCTCAGAGAAAGTGGTTCTATGATGACGTCCTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR TCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGTGGCAAAATAAAAAGTaGGATATCGACTGGGCATGG +
Preference number: 2 (lower is better)
Translates to: PLSSLGITRKHDVHLARWWQNKK*DIDWAW
Trigger: CCATGCCCAGTCGATATCTCACTTTTTATTTTGCCA...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR TCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAAAGGCCCAGTCTTCCCTaGCCCTGTTGGTACTCAAGG +
Preference number: 2 (lower is better)
Translates to: IGQIHNCTSKHHRTINPERPSLP*PCWYSR
Trigger: CCTTGAGTACCAACAGGGTCAGGGAAGACTGGGCCT...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR TCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCGTTTTCTGTTGTGAATaGCATTCACAACACAGAGTT +
Preference number: 2 (lower is better)
Translates to: LTSVSLRPLLASVDSLCAVFCCE*HSQHRV
Trigger: AACTCTGTGTTGTGAATGTCATTCACAACAGAAAAC...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR GCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTTCTCTGAGGAAGCTCTaGTTGGGGGAGGTTTTAATT +
Preference number: 2 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPSLRKL*LGEVLI
Trigger: AATTAAAACCTCCCCCAAGCAGAGCTTCCTCAGAGA...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR TCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAAGTGGTGGAATGCACCTaGAGTCTCAGCTACTCGGGA +
Preference number: 2 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEVVECT*SLSYSG
Trigger: TCCCGAGTAGCTGAGACTTCAGGTGCATTCCACCAC...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR TCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGCAGCTGAACAAGGATTaGTACTTAAAACCAGGGATT +
Preference number: 2 (lower is better)
Translates to: PLSSLGITRKHDVHLARWQLNKD*YLKPGI
Trigger: AATCCCTGGTTTTAAGTATCAATCCTTGTTCAGCTG...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR GCA 90 bp GGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATGAGCTGAGGCACAATAATTaGTTGGACCCAGGAGAAGGA +
Preference number: 2 (lower is better)
Translates to: GMELILGRYGIQEIGLHELRHNN*LDPGEG
Trigger: TCCTTCTCCTGGGTCCAAGCAATTATTGTGCCTCAG...CTCATGAAGACCAATCTCTTGAATCCCATATCTACCCAGAATTAACTCCATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAATGGGGATACGAGAGCTaGGCAGGCCACAGTCTTTTT +
Preference number: 2 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEWGYES*AGHSLF
Trigger: AAAAAGACTGTGGCCTGCCCAGCTCTCGTATCCCCA...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAAACTTGCTGGGGCATCTaGGAAAGAGAGCTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: IGQIHNCTSKHHRTINPETCWGI*ERELPL
Trigger: GAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGT...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR GCA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCCATTTATCAAGGATCTaGAAGGGATTTAGAGGTGAC +
Preference number: 2 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTHLSRI*KGFRGD
Trigger: GTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR TCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAAATTCTGGACGTGTTCTaGAAATCACAGTCATCCCTA +
Preference number: 2 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEILDVF*KSQSSL
Trigger: TAGGGATGACTGTGATTTTCAGAACACGTCCAGAAT...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAACTTGATGAAAAATTCTaGACGTGTTCTGAAAATCAC +
Preference number: 2 (lower is better)
Translates to: IGQIHNCTSKHHRTINPELDEKF*TCSENH
Trigger: GTGATTTTCAGAACACGTCCAGAATTTTTCATCAAG...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CAA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACCACTTAGAGATGGAGTaGGCTTTCCCCGTTGGAGGG +
Preference number: 3 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDHLEME*AFPVGG
Trigger: CCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTG...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR CCA 72 bp GGAAGCACAGTCCTTCCTGGGCAGTTGCCTCTAGCCTaGTGGGAGGTGTTCCTCACACCCAGGACTCTCATC +
Preference number: 3 (lower is better)
Translates to: GSTVLPGQLPLA*WEVFLTPRTLI
Trigger: GATGAGAGTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGGACTGTGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CAA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACTCCACAGCTCTGGGTTaGATTTCTAGCACTGTCACT +
Preference number: 3 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDSTALG*ISSTVT
Trigger: AGTGACAGTGCTAGAAATCAAACCCAGAGCTGTGGA...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR TCA 72 bp AGAAGCTCCTGGCCAGGTGGCCTTGAGGAACAGGGATaGGTTCGGCACTTAGAGATGGAGTTGGCTTTCCCC +
Preference number: 3 (lower is better)
Translates to: RSSWPGGLEEQG*VRHLEMELAFP
Trigger: GGGGAAAGCCAACTCCATCTCTAAGTGCCGAACTCATCCCTGTTCCTCAAGGCCACCTGGCCAGGAGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR GCA 72 bp AGGCACAATAATTGCTTGGACCCAGGAGAAGGAGGCTaGAGTGAGCCGAGGTCGTGTCACTGTACTCCAGCC +
Preference number: 3 (lower is better)
Translates to: RHNNCLDPGEGG*SEPRSCHCTPA
Trigger: GGCTGGAGTACAGTGACACGACCTCGGCTCACTGCAGCCTCCTTCTCCTGGGTCCAAGCAATTATTGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR GCA 72 bp CAACTCAGCCAGAGCAATGAGATGCAAGGTTACACTTaGTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCC +
Preference number: 3 (lower is better)
Translates to: QLSQSNEMQGYT*WGIWERELPLS
Trigger: GGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCTCATTGCTCTGGCTGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CAA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCAGGCACAATAATTGCTaGGACCCAGGAGAAGGAGGC +
Preference number: 3 (lower is better)
Translates to: LTSVSLRPLLASVDSLCARHNNC*DPGEGG
Trigger: GCCTCCTTCTCCTGGGTCCAAGCAATTATTGTGCCT...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CAA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCGATGCAAGGTTACACTaGCTGGGGCATCTGGGAAAG +
Preference number: 3 (lower is better)
Translates to: LTSVSLRPLLASVDSLCADARLH*LGHLGK
Trigger: CTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATC...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR TCA 72 bp TTGGTCAGAAACAGGCACACAACTCAGCCAGAGCAATaGGATGCAAGGTTACACTTGCTGGGGCATCTGGGA +
Preference number: 3 (lower is better)
Translates to: LVRNRHTTQPEQ*DARLHLLGHLG
Trigger: TCCCAGATGCCCCAGCAAGTGTAACCTTGCATCTCATTGCTCTGGCTGAGTTGTGTGCCTGTTTCTGACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR GCA 72 bp CAGAAACAGGCACACAACTCAGCCAGAGCAATGAGATaGAAGGTTACACTTGCTGGGGCATCTGGGAAAGAG +
Preference number: 3 (lower is better)
Translates to: QKQAHNSARAMR*KVTLAGASGKE
Trigger: CTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCTCATTGCTCTGGCTGAGTTGTGTGCCTGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR TCA 72 bp GCTTCCTCTCTCCTCTTTGGGCATCACCAGAAAACATaGTGTCCATTTAGCCAGATGGTGTGGCTTGGGGAT +
Preference number: 3 (lower is better)
Translates to: ASSLLFGHHQKT*CPFSQMVWLGD
Trigger: ATCCCCAAGCCACACCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CAA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTGTAGTGCAGGGGCCATaGAGTAGTAGTCCTTCCAAG +
Preference number: 3 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPVVQGP*SSSPSK
Trigger: CTTGGAAGGACTACTACTCAATGGCCCCTGCACTAC...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CAA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGTCCACAGCTCTGGGTTaGATTTCTAGCACTGTCACT +
Preference number: 3 (lower is better)
Translates to: PLSSLGITRKHDVHLARWSTALG*ISSTVT
Trigger: AGTGACAGTGCTAGAAATCAAACCCAGAGCTGTGGA...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CAA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTGCTCAAGCTACCTTCTaGATGAAAAATTCTGGACGT +
Preference number: 3 (lower is better)
Translates to: RCKVTLAGASGKESFLSPAQATF*MKNSGR
Trigger: ACGTCCAGAATTTTTCATCAAGAAGGTAGCTTGAGC...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CAA 90 bp GGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATGAGCACTTAGAGATGGAGTaGGCTTTCCCCGTTGGAGGG +
Preference number: 3 (lower is better)
Translates to: GMELILGRYGIQEIGLHEHLEME*AFPVGG
Trigger: CCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTG...CTCATGAAGACCAATCTCTTGAATCCCATATCTACCCAGAATTAACTCCATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CAA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCATGGGATTCAAGAGATaGGTCTTCATGAGGCATTTA +
Preference number: 3 (lower is better)
Translates to: LTSVSLRPLLASVDSLCAMGFKR*VFMRHL
Trigger: TAAATGCCTCATGAAGACCAATCTCTTGAATCCCAT...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CAA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCACATCACTGGAGTTATaGTCTCCTGAGAGAATGTTT +
Preference number: 3 (lower is better)
Translates to: LTSVSLRPLLASVDSLCATSLEL*SPERMF
Trigger: AAACATTCTCTCAGGAGACAATAACTCCAGTGATGT...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CAA 90 bp GGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATGAGGTAGTGCAGGGGCCATaGAGTAGTAGTCCTTCCAAG +
Preference number: 3 (lower is better)
Translates to: GMELILGRYGIQEIGLHEVVQGP*SSSPSK
Trigger: CTTGGAAGGACTACTACTCAATGGCCCCTGCACTAC...CTCATGAAGACCAATCTCTTGAATCCCATATCTACCCAGAATTAACTCCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR TCA 72 bp AAGAACAATAATAAATTCAGGAGGCCCAGTCTTCCCTaGCCCTGTTGGTACTCAAGGAGACAATGGCTTCAG +
Preference number: 3 (lower is better)
Translates to: KNNNKFRRPSLP*PCWYSRRQWLQ
Trigger: CTGAAGCCATTGTCTCCTTGAGTACCAACAGGGTCAGGGAAGACTGGGCCTCCTGAATTTATTATTGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CAA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCCTGAGGAAGCTCTGCTaGGGGGAGGTTTTAATTCAT +
Preference number: 3 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTLRKLC*GEVLIH
Trigger: ATGAATTAAAACCTCCCCCAAGCAGAGCTTCCTCAG...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR GCA 72 bp AAGAGATTGGTCTTCATGAGGCATTTATCAAGGATCTaGAAGGGATTTAGAGGTGACGGAAGCACAGTCCTT +
Preference number: 3 (lower is better)
Translates to: KRLVFMRHLSRI*KGFRGDGSTVL
Trigger: AAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATGCCTCATGAAGACCAATCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CAA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCATTCCTCCATGGGTTTaGCATTTCAGGCTCAAGCTA +
Preference number: 3 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTIPPWV*HFRLKL
Trigger: TAGCTTGAGCCTGAAATGCAAAACCCATGGAGGAAT...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CAA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAACAGGCCACAGTCTTTTaGATATCGGGAGGGAAACCC +
Preference number: 3 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEQATVF*ISGGKP
Trigger: GGGTTTCCCTCCCGATATCAAAAAGACTGTGGCCTG...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR-3UTR CAA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAATCTCTCAGGCCTCTTTaGGCCTCAGTTGACTCTCTC +
Preference number: 3 (lower is better)
Translates to: IGQIHNCTSKHHRTINPESLRPL*ASVDSL
Trigger: GAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGA...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR TCA 72 bp TTTTCTGTTGTGAATGACATTCACAACACAGAGTTCTaGCTAACACAAGGCTTACTCTCACCTCTTCATCCC +
Preference number: 3 (lower is better)
Translates to: FSVVNDIHNTEF*LTQGLLSPLHP
Trigger: GGGATGAAGAGGTGAGAGTAAGCCTTGTGTTAGTCAGAACTCTGTGTTGTGAATGTCATTCACAACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR TCA 72 bp TTAAGTCAATATGAATATTTCATCCTCCTGACTCAGTaGTTGGTCAGAAACAGGCACACAACTCAGCCAGAG +
Preference number: 3 (lower is better)
Translates to: LSQYEYFILLTQ*LVRNRHTTQPE
Trigger: CTCTGGCTGAGTTGTGTGCCTGTTTCTGACCAATCACTGAGTCAGGAGGATGAAATATTCATATTGACTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR CCA 72 bp GAGAAAATCAATAGGAATTTTCCAGCTATGTCTCTCTaGGAAACTCATGAAAGCTCAAACACAGCATTAAGA +
Preference number: 3 (lower is better)
Translates to: EKINRNFPAMSL*ETHESSNTALR
Trigger: TCTTAATGCTGTGTTTGAGCTTTCATGAGTTTCCCAGAGAGACATAGCTGGAAAATTCCTATTGATTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR TCA 72 bp GTAGTTTGCATAATATTTTGGGTTTTCTGTTGTGAATaGCATTCACAACACAGAGTTCTGACTAACACAAGG +
Preference number: 3 (lower is better)
Translates to: VVCIIFWVFCCE*HSQHRVLTNTR
Trigger: CCTTGTGTTAGTCAGAACTCTGTGTTGTGAATGTCATTCACAACAGAAAACCCAAAATATTATGCAAACTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR TCA 72 bp AGGAAGAAAGAAAGGAAGGAAGAAAGAAAAGGAAGTTaGGTGCGTATGTTATTTTTAGACAAAGTAGACTTC +
Preference number: 3 (lower is better)
Translates to: RKKERKEERKGS*VRMLFLDKVDF
Trigger: GAAGTCTACTTTGTCTAAAAATAACATACGCACTCAACTTCCTTTTCTTTCTTCCTTCCTTTCTTTCTTCCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR CCA 72 bp ATATATGAAGCAAAAGCTGACAGAACTAAAGAGAATTaGACAAATCCACAATTGTACTTCAAAGCATCACAG +
Preference number: 3 (lower is better)
Translates to: IYEAKADRTKEN*TNPQLYFKASQ
Trigger: CTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAATTCTCTTTAGTTCTGTCAGCTTTTGCTTCATATAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACCGGGCCCTTGAGTCGTaGTTTCCTGGTCATGACCGG +
Preference number: 4 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDRALES*FPGHDR
Trigger: CCGGTCATGACCAGGAAACCACGACTCAAGGGCCCG...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACGGCAGAAGAATCGCTTaGACCTGGGAGGCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDGRRIA*TWEAKV
Trigger: AACCTTTGCCTCCCAGGTTCAAGCGATTCTTCTGCC...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp GTTCGGCACTTAGAGATGGAGTTGGCTTTCCCCGTTGGAGGGAAAGGCATGAGACCGGATGCCCTGGGATaGCCGCCATCCAACCTGTGC +
Preference number: 4 (lower is better)
Translates to: VRHLEMELAFPVGGKGMRPDALG*PPSNLC
Trigger: GCACAGGTTGGATGGCGGGCATCCCAGGGCATCCGG...TCTCATGCCTTTCCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTGCCGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACACAGAGCCGGAGGCCTaGTCCACATTATTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDTEPEA*STLFSW
Trigger: CCAGGAAAATAATGTGGACCAGGCCTCCGGCTCTGT...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCCTGTGCAGGCCCCCTTaGGCAGGGGAAGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: LTSVSLRPLLASVDSLCALCRPP*AGEAGL
Trigger: GAGTCCTGCTTCCCCTGCCCAAGGGGGCCTGCACAG...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTTCTGCCATCACGGCCTaGGGCCCCATTATGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RCKVTLAGASGKESFLSPSAITA*GPIMAR
Trigger: CCGGGCCATAATGGGGCCCCAGGCCGTGATGGCAGA...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACCCACAGCTCTGGGTTTaGTTTCTAGCACTGTCACTT +
Preference number: 4 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDPQLWV*FLALSL
Trigger: AAGTGACAGTGCTAGAAATCAAACCCAGAGCTGTGG...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGCAGGGGTGCCATCTCTaGCATCACGGCCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWQGCHL*HHGLGP
Trigger: GGGCCCCAGGCCGTGATGGCAGAGATGGCACCCCTG...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACACAGCCCAGGAATGTTaGAGTGGAATTTACCAGTGG +
Preference number: 4 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDTAQEC*SGIYQW
Trigger: CCACTGGTAAATTCCACTGCAACATTCCTGGGCTGT...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCTCGCCCACCTCCAGATaGAGGAGCACAGAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: LTSVSLRPLLASVDSLCASPTSR*RSTEPE
Trigger: CTCCGGCTCTGTGCTCCTGCATCTGGAGGTGGGCGA...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCCTGGCCAGGTGGCCTTaGGGAACAGGGATGAGTTCG +
Preference number: 4 (lower is better)
Translates to: LTSVSLRPLLASVDSLCALARWP*GTGMSS
Trigger: CGAACTCATCCCTGTTCCTCAAGGCCACCTGGCCAG...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTAGAAGGAGGCTGCAGTaGGCCGAGGTCGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: RCKVTLAGASGKESFLSPRRRLQ*AEVVSL
Trigger: CAGTGACACGACCTCGGCTCACTGCAGCCTCCTTCT...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTCTGGGCGCAGTGGCATaGGCCTGTAGTTCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: RCKVTLAGASGKESFLSPLGAVA*ACSSSY
Trigger: GTAGCTGGAACTACAGGCTCATGCCACTGCGCCCAG...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTCCAGGAGAAGGAGGCTaGAGTGAGCCGAGGTCGTGT +
Preference number: 4 (lower is better)
Translates to: RCKVTLAGASGKESFLSPPGEGG*SEPRSC
Trigger: ACACGACCTCGGCTCACTGCAGCCTCCTTCTCCTGG...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCCCTTCCCCATACACCTaGAGCCAGACTTGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: LTSVSLRPLLASVDSLCAPSPYT*SQTWSP
Trigger: GGGCGACCAAGTCTGGCTCCAGGTGTATGGGGAAGG...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACATACAAAAATTAGCCTaGCATGGTGGTAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDIQKLA*HGGRHL
Trigger: CAGGTGCCTACCACCATGCCAGGCTAATTTTTGTAT...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACTGGCAAAATAAAAAGTaGGATATCGACTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDWQNKK*DIDWAW
Trigger: CCATGCCCAGTCGATATCTCACTTTTTATTTTGCCA...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp GTTCGGCACTTAGAGATGGAGTTGGCTTTCCCCGTTGGAGGGAAAGGCATGAGACCAGCAACAGCATCCTaGGCCCTGATGTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: VRHLEMELAFPVGGKGMRPATAS*ALMSGV
Trigger: AACTCCTGACATCAGGGCTCAGGATGCTGTTGCTGG...TCTCATGCCTTTCCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTGCCGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444204.2
CDS-3UTR CCA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACTACTCAAGGAGACAATaGCTTCAGAATTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDYSRRQ*LQNSSM
Trigger: CATGGAGGAATTCTGAAGCCATTGTCTCCTTGAGTA...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCGTGGTTTCCTGGTCATaGCCGGGCAGAGCTAATAGC +
Preference number: 4 (lower is better)
Translates to: LTSVSLRPLLASVDSLCAVVSWS*PGRANS
Trigger: GCTATTAGCTCTGCCCGGTCATGACCAGGAAACCAC...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGAGGACTCCGGGCCCTTaGGTCGTGGTTTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWRTPGP*VVVSWS
Trigger: TGACCAGGAAACCACGACTCAAGGGCCCGGAGTCCT...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTGCCTGGAGGAGGCTCTaGGTTAGTGGTGATCAGTTG +
Preference number: 4 (lower is better)
Translates to: RCKVTLAGASGKESFLSPAWRRL*VSGDQL
Trigger: CAACTGATCACCACTAACTCAGAGCCTCCTCCAGGC...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGAGAAGGAGGCTGCAGTaGGCCGAGGTCGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWRRRLQ*AEVVSL
Trigger: CAGTGACACGACCTCGGCTCACTGCAGCCTCCTTCT...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTCACCCCAACCAGATGTaGGACTGTGAGCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: RCKVTLAGASGKESFLSPHPNQM*DCEHSQ
Trigger: CTGGCTATGCTCACAGTCTCACATCTGGTTGGGGTG...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCCCGCCATCCAACCTGTaGAGGCCCCCTTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPPPSNL*RPPWAG
Trigger: CCCTGCCCAAGGGGGCCTGCACAGGTTGGATGGCGG...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp TATCTGGTCATGTTTGTGAAGCTCCCCAGGACTGGGAACATAGCATATGATTTTCCGCCATCCAACCTGTaGAGGCCCCCTTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: YLVMFVKLPRTGNIAYDFPPSNL*RPPWAG
Trigger: CCCTGCCCAAGGGGGCCTGCACAGGTTGGATGGCGG...AAAATCATATGCTATGTTCCCAGTCCTGGGGAGCTTCACAAACATGACCAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp GTTCGGCACTTAGAGATGGAGTTGGCTTTCCCCGTTGGAGGGAAAGGCATGAGACAGGTTCTCCTTTCCTaGCTTGGATTCCCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: VRHLEMELAFPVGGKGMRQVLLS*LGFPES
Trigger: GCTTTCCGGGAATCCAAGGCAGGAAAGGAGAACCTG...TCTCATGCCTTTCCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTGCCGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACCATTTATCAAGGATCTaGAAGGGATTTAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDHLSRI*KGFRGD
Trigger: GTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTCCGAGATCATGCCACTaGACTCTAGCCTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: RCKVTLAGASGKESFLSPPRSCH*TLAWQQ
Trigger: CTGTTGCCAGGCTAGAGTGCAGTGGCATGATCTCGG...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCCAGTTGCCTCTAGCCTaGTGGGAGGTGTTCCTCACA +
Preference number: 4 (lower is better)
Translates to: LTSVSLRPLLASVDSLCAQLPLA*WEVFLT
Trigger: TGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTG...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACATTACATGCAGAGACTaGAATGGAGTTAATTCTGGG +
Preference number: 4 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDITCRD*NGVNSG
Trigger: CCCAGAATTAACTCCATTCCAGTCTCTGCATGTAAT...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp GTTCGGCACTTAGAGATGGAGTTGGCTTTCCCCGTTGGAGGGAAAGGCATGAGACACTGCACTCTAGCCTaGCAACAGAGGGAAACTCCA +
Preference number: 4 (lower is better)
Translates to: VRHLEMELAFPVGGKGMRHCTLA*QQRETP
Trigger: TGGAGTTTCCCTCTGTTGCCAGGCTAGAGTGCAGTG...TCTCATGCCTTTCCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTGCCGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGAGGCCCAGTCTTCCCTaGCCCTGTTGGTACTCAAGG +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWRPSLP*PCWYSR
Trigger: CCTTGAGTACCAACAGGGTCAGGGAAGACTGGGCCT...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCCCGGATGCCCTGGGATaGCCGCCATCCAACCTGTGC +
Preference number: 4 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPPDALG*PPSNLC
Trigger: GCACAGGTTGGATGGCGGGCATCCCAGGGCATCCGG...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTCCTTCTCACCAGGGGTaGCATCTCTGCCATCACGGC +
Preference number: 4 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPPSHQG*HLCHHG
Trigger: GCCGTGATGGCAGAGATGGCACCCCTGGTGAGAAGG...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp GTTCGGCACTTAGAGATGGAGTTGGCTTTCCCCGTTGGAGGGAAAGGCATGAGAGCCAGAGCAATGAGATaGAAGGTTACACTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VRHLEMELAFPVGGKGMRARAMR*KVTLAG
Trigger: CCCAGCAAGTGTAACCTTGCATCTCATTGCTCTGGC...TCTCATGCCTTTCCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTGCCGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp TATCTGGTCATGTTTGTGAAGCTCCCCAGGACTGGGAACATAGCATATGATTTTTCTGCCATCACGGCCTaGGGCCCCATTATGGCCCGG +
Preference number: 4 (lower is better)
Translates to: YLVMFVKLPRTGNIAYDFSAITA*GPIMAR
Trigger: CCGGGCCATAATGGGGCCCCAGGCCGTGATGGCAGA...AAAATCATATGCTATGTTCCCAGTCCTGGGGAGCTTCACAAACATGACCAGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTCCTTCCCCATACACCTaGAGCCAGACTTGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPPSPYT*SQTWSP
Trigger: GGGCGACCAAGTCTGGCTCCAGGTGTATGGGGAAGG...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGGACTTTGGGGCTGTTTaGCCTGGAGGAGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWDFGAV*PGGGSE
Trigger: CTCAGAGCCTCCTCCAGGCCAAACAGCCCCAAAGTC...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGCCAGCAACAGCATCCTaGGCCCCTCTGGTATGGAAT +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWPATAS*APLVWN
Trigger: ATTCCATACCAGAGGGGCTCAGGATGCTGTTGCTGG...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320741.7
CDS-3UTR TCA 90 bp GTTCGGCACTTAGAGATGGAGTTGGCTTTCCCCGTTGGAGGGAAAGGCATGAGATCTCCAATCCCACACTaGATGCTGAGCGGTATACAT +
Preference number: 4 (lower is better)
Translates to: VRHLEMELAFPVGGKGMRSPIPH*MLSGIH
Trigger: ATGTATACCGCTCAGCATTCAGTGTGGGATTGGAGA...TCTCATGCCTTTCCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTGCCGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTAGGCCCAGTCTTCCCTaGCCCTGTTGGTACTCAAGG +
Preference number: 4 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPRPSLP*PCWYSR
Trigger: CCTTGAGTACCAACAGGGTCAGGGAAGACTGGGCCT...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCTCGCCCACCTCCAGATaGAGGAGCACAGAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTSPTSR*RSTEPE
Trigger: CTCCGGCTCTGTGCTCCTGCATCTGGAGGTGGGCGA...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp GGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATGAGCTGTGCAGGCCCCCTTaGGCAGGGGAAGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: GMELILGRYGIQEIGLHELCRPP*AGEAGL
Trigger: GAGTCCTGCTTCCCCTGCCCAAGGGGGCCTGCACAG...CTCATGAAGACCAATCTCTTGAATCCCATATCTACCCAGAATTAACTCCATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGCAGTTGCCTCTAGCCTaGTGGGAGGTGTTCCTCACA +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWQLPLA*WEVFLT
Trigger: TGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTG...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACCTTGATGAAAAATTCTaGACGTGTTCTGAAAATCAC +
Preference number: 4 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDLDEKF*TCSENH
Trigger: GTGATTTTCAGAACACGTCCAGAATTTTTCATCAAG...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCCAAGGTTACACTTGCTaGGGCATCTGGGAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: LTSVSLRPLLASVDSLCAQGYTC*GIWERE
Trigger: CTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTG...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTGTGGTTTCCTGGTCATaGCCGGGCAGAGCTAATAGC +
Preference number: 4 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPVVSWS*PGRANS
Trigger: GCTATTAGCTCTGCCCGGTCATGACCAGGAAACCAC...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp TATCTGGTCATGTTTGTGAAGCTCCCCAGGACTGGGAACATAGCATATGATTTTAGGACTCCGGGCCCTTaGGTCGTGGTTTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: YLVMFVKLPRTGNIAYDFRTPGP*VVVSWS
Trigger: TGACCAGGAAACCACGACTCAAGGGCCCGGAGTCCT...AAAATCATATGCTATGTTCCCAGTCCTGGGGAGCTTCACAAACATGACCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTTCTCCAATCCCACACTaGATGCTGAGCGGTATACAT +
Preference number: 4 (lower is better)
Translates to: RCKVTLAGASGKESFLSPSPIPH*MLSGIH
Trigger: ATGTATACCGCTCAGCATTCAGTGTGGGATTGGAGA...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp TATCTGGTCATGTTTGTGAAGCTCCCCAGGACTGGGAACATAGCATATGATTTTCTGGCCAGGTGGCCTTaGGGAACAGGGATGAGTTCG +
Preference number: 4 (lower is better)
Translates to: YLVMFVKLPRTGNIAYDFLARWP*GTGMSS
Trigger: CGAACTCATCCCTGTTCCTCAAGGCCACCTGGCCAG...AAAATCATATGCTATGTTCCCAGTCCTGGGGAGCTTCACAAACATGACCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCCTGGGCGCAGTGGCATaGGCCTGTAGTTCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTLGAVA*ACSSSY
Trigger: GTAGCTGGAACTACAGGCTCATGCCACTGCGCCCAG...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAACAGGGGTGCCATCTCTaGCATCACGGCCTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEQGCHL*HHGLGP
Trigger: GGGCCCCAGGCCGTGATGGCAGAGATGGCACCCCTG...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCCCTTCTCACCAGGGGTaGCATCTCTGCCATCACGGC +
Preference number: 4 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPPSHQG*HLCHHG
Trigger: GCCGTGATGGCAGAGATGGCACCCCTGGTGAGAAGG...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCCCAGGAGAAGGAGGCTaGAGTGAGCCGAGGTCGTGT +
Preference number: 4 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPPGEGG*SEPRSC
Trigger: ACACGACCTCGGCTCACTGCAGCCTCCTTCTCCTGG...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTCTGAGGCACAATAATTaGTTGGACCCAGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: RCKVTLAGASGKESFLSPLRHNN*LDPGEG
Trigger: TCCTTCTCCTGGGTCCAAGCAATTATTGTGCCTCAG...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp TATCTGGTCATGTTTGTGAAGCTCCCCAGGACTGGGAACATAGCATATGATTTTCGGGCCCTTGAGTCGTaGTTTCCTGGTCATGACCGG +
Preference number: 4 (lower is better)
Translates to: YLVMFVKLPRTGNIAYDFRALES*FPGHDR
Trigger: CCGGTCATGACCAGGAAACCACGACTCAAGGGCCCG...AAAATCATATGCTATGTTCCCAGTCCTGGGGAGCTTCACAAACATGACCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCACCTGGAGCCAGACTTaGTCGCCCACCTCCAGATGC +
Preference number: 4 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPTWSQT*SPTSRC
Trigger: GCATCTGGAGGTGGGCGACCAAGTCTGGCTCCAGGT...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp TATCTGGTCATGTTTGTGAAGCTCCCCAGGACTGGGAACATAGCATATGATTTTACCTGGAGCCAGACTTaGTCGCCCACCTCCAGATGC +
Preference number: 4 (lower is better)
Translates to: YLVMFVKLPRTGNIAYDFTWSQT*SPTSRC
Trigger: GCATCTGGAGGTGGGCGACCAAGTCTGGCTCCAGGT...AAAATCATATGCTATGTTCCCAGTCCTGGGGAGCTTCACAAACATGACCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTCATCAGAGAAGCTCCTaGCCAGGTGGCCTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPHQRSS*PGGLEE
Trigger: TTCCTCAAGGCCACCTGGCCAGGAGCTTCTCTGATG...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTAAGCACAGTCCTTCCTaGGCAGTTGCCTCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPKHSPS*AVASSL
Trigger: CAGGCTAGAGGCAACTGCCCAGGAAGGACTGTGCTT...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGCACTGCACTCTAGCCTaGCAACAGAGGGAAACTCCA +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWHCTLA*QQRETP
Trigger: TGGAGTTTCCCTCTGTTGCCAGGCTAGAGTGCAGTG...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
3UTR CAA 72 bp TGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTCTTaGGGCATCACCAGAAAACATGATGTCCATTTAGCC +
Preference number: 4 (lower is better)
Translates to: WGIWERELPLSS*GITRKHDVHLA
Trigger: GGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp TATCTGGTCATGTTTGTGAAGCTCCCCAGGACTGGGAACATAGCATATGATTTTCCAAGATCACACCACTaGACTCCAGCCAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: YLVMFVKLPRTGNIAYDFPRSHH*TPARAT
Trigger: TGTGGCCCTGGCTGGAGTTCAGTGGTGTGATCTTGG...AAAATCATATGCTATGTTCCCAGTCCTGGGGAGCTTCACAAACATGACCAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp GTTCGGCACTTAGAGATGGAGTTGGCTTTCCCCGTTGGAGGGAAAGGCATGAGAACAAAGTCAGGAGTTTaGAACCAACCTGACGAATGT +
Preference number: 4 (lower is better)
Translates to: VRHLEMELAFPVGGKGMRTKSGV*NQPDEC
Trigger: ACATTCGTCAGGTTGGTTTCAAACTCCTGACTTTGT...TCTCATGCCTTTCCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTGCCGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTCAGGTTCTCCTTTCCTaGCTTGGATTCCCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPQVLLS*LGFPES
Trigger: GCTTTCCGGGAATCCAAGGCAGGAAAGGAGAACCTG...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTTCTCTGAGGAAGCTCTaGTTGGGGGAGGTTTTAATT +
Preference number: 4 (lower is better)
Translates to: RCKVTLAGASGKESFLSPSLRKL*LGEVLI
Trigger: AATTAAAACCTCCCCCAAGCAGAGCTTCCTCAGAGA...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAACCTGGGGCCCCATTATaGCCCGGATGCCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEPGAPL*PGCPGM
Trigger: CATCCCAGGGCATCCGGGCCATAATGGGGCCCCAGG...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp TATCTGGTCATGTTTGTGAAGCTCCCCAGGACTGGGAACATAGCATATGATTTTGACTTTGGGGCTGTTTaGCCTGGAGGAGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: YLVMFVKLPRTGNIAYDFDFGAV*PGGGSE
Trigger: CTCAGAGCCTCCTCCAGGCCAAACAGCCCCAAAGTC...AAAATCATATGCTATGTTCCCAGTCCTGGGGAGCTTCACAAACATGACCAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGGTCCATTTAGCCAGATaGTGTGGCTTGGGGATACGA +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWVHLAR*CGLGIR
Trigger: TCGTATCCCCAAGCCACACCATCTGGCTAAATGGAC...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTAATACAAAAATTAGCTaGGCGCAGTGGCATGAGCCT +
Preference number: 4 (lower is better)
Translates to: RCKVTLAGASGKESFLSPNTKIS*AQWHEP
Trigger: AGGCTCATGCCACTGCGCCCAGCTAATTTTTGTATT...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp GTTCGGCACTTAGAGATGGAGTTGGCTTTCCCCGTTGGAGGGAAAGGCATGAGACAGCTGAACAAGGATTaGTACTTAAAACCAGGGATT +
Preference number: 4 (lower is better)
Translates to: VRHLEMELAFPVGGKGMRQLNKD*YLKPGI
Trigger: AATCCCTGGTTTTAAGTATCAATCCTTGTTCAGCTG...TCTCATGCCTTTCCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTGCCGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTTCTCTGGGAAACTCATaGAAGCTCAAACACAGCATT +
Preference number: 4 (lower is better)
Translates to: RCKVTLAGASGKESFLSPSLGNS*KLKHSI
Trigger: AATGCTGTGTTTGAGCTTTCATGAGTTTCCCAGAGA...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAACCATTATGGCCCGGATaGCCTGGGATGCCCGCCATC +
Preference number: 4 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEPLWPG*PGMPAI
Trigger: GATGGCGGGCATCCCAGGGCATCCGGGCCATAATGG...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGACAGCCCAGGAATGTTaGAGTGGAATTTACCAGTGG +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWTAQEC*SGIYQW
Trigger: CCACTGGTAAATTCCACTGCAACATTCCTGGGCTGT...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp TATCTGGTCATGTTTGTGAAGCTCCCCAGGACTGGGAACATAGCATATGATTTTCCGAGATCATGCCACTaGACTCTAGCCTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: YLVMFVKLPRTGNIAYDFPRSCH*TLAWQQ
Trigger: CTGTTGCCAGGCTAGAGTGCAGTGGCATGATCTCGG...AAAATCATATGCTATGTTCCCAGTCCTGGGGAGCTTCACAAACATGACCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTGCCAGAGCAATGAGATaGAAGGTTACACTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPARAMR*KVTLAG
Trigger: CCCAGCAAGTGTAACCTTGCATCTCATTGCTCTGGC...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp GTTCGGCACTTAGAGATGGAGTTGGCTTTCCCCGTTGGAGGGAAAGGCATGAGAGGACAGGTATTATTTTaGATCTATCATCCACTCTCC +
Preference number: 4 (lower is better)
Translates to: VRHLEMELAFPVGGKGMRGQVLF*IYHPLS
Trigger: GGAGAGTGGATGATAGATGCAAAATAATACCTGTCC...TCTCATGCCTTTCCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTGCCGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp GTTCGGCACTTAGAGATGGAGTTGGCTTTCCCCGTTGGAGGGAAAGGCATGAGAATTACATGCAGAGACTaGAATGGAGTTAATTCTGGG +
Preference number: 4 (lower is better)
Translates to: VRHLEMELAFPVGGKGMRITCRD*NGVNSG
Trigger: CCCAGAATTAACTCCATTCCAGTCTCTGCATGTAAT...TCTCATGCCTTTCCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTGCCGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp TATCTGGTCATGTTTGTGAAGCTCCCCAGGACTGGGAACATAGCATATGATTTTTCCCACACTGAATGCTaGGCGGTATACATAGGCACC +
Preference number: 4 (lower is better)
Translates to: YLVMFVKLPRTGNIAYDFSHTEC*AVYIGT
Trigger: GGTGCCTATGTATACCGCTCAGCATTCAGTGTGGGA...AAAATCATATGCTATGTTCCCAGTCCTGGGGAGCTTCACAAACATGACCAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp GGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATGAGGTGGTGGAATGCACCTaGAGTCTCAGCTACTCGGGA +
Preference number: 4 (lower is better)
Translates to: GMELILGRYGIQEIGLHEVVECT*SLSYSG
Trigger: TCCCGAGTAGCTGAGACTTCAGGTGCATTCCACCAC...CTCATGAAGACCAATCTCTTGAATCCCATATCTACCCAGAATTAACTCCATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCGGCAGAAGAATCGCTTaGACCTGGGAGGCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPGRRIA*TWEAKV
Trigger: AACCTTTGCCTCCCAGGTTCAAGCGATTCTTCTGCC...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp GGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATGAGCACCCCAACCAGATGTaGGACTGTGAGCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: GMELILGRYGIQEIGLHEHPNQM*DCEHSQ
Trigger: CTGGCTATGCTCACAGTCTCACATCTGGTTGGGGTG...CTCATGAAGACCAATCTCTTGAATCCCATATCTACCCAGAATTAACTCCATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGTTCCTCCATGGGTTTTaGATTTCAGGCTCAAGCTAC +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWFLHGF*ISGSSY
Trigger: GTAGCTTGAGCCTGAAATGCAAAACCCATGGAGGAA...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp GTTCGGCACTTAGAGATGGAGTTGGCTTTCCCCGTTGGAGGGAAAGGCATGAGAACAGTGTCCCAATTTTaGTTTAGGGAAAATACCTCT +
Preference number: 4 (lower is better)
Translates to: VRHLEMELAFPVGGKGMRTVSQF*FRENTS
Trigger: AGAGGTATTTTCCCTAAAGCAAAATTGGGACACTGT...TCTCATGCCTTTCCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTGCCGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTGGACAGGTATTATTTTaGATCTATCATCCACTCTCC +
Preference number: 4 (lower is better)
Translates to: RCKVTLAGASGKESFLSPGQVLF*IYHPLS
Trigger: GGAGAGTGGATGATAGATGCAAAATAATACCTGTCC...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGAGGACCAATAAGACCTaGATCTCCTTTCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWRTNKT*ISFLTL
Trigger: AAGGGTGAGAAAGGAGATCCAGGTCTTATTGGTCCT...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCAGTGGAATTTACCAGTaGAGCCATCATAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: LTSVSLRPLLASVDSLCASGIYQ*SHHSGF
Trigger: AAAACCACTATGATGGCTCCACTGGTAAATTCCACT...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCACAGAGCCGGAGGCCTaGTCCACATTATTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPTEPEA*STLFSW
Trigger: CCAGGAAAATAATGTGGACCAGGCCTCCGGCTCTGT...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp GGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATGAGAAGCACAGTCCTTCCTaGGCAGTTGCCTCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: GMELILGRYGIQEIGLHEKHSPS*AVASSL
Trigger: CAGGCTAGAGGCAACTGCCCAGGAAGGACTGTGCTT...CTCATGAAGACCAATCTCTTGAATCCCATATCTACCCAGAATTAACTCCATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGATACAAAAATTAGCCTaGCATGGTGGTAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWIQKLA*HGGRHL
Trigger: CAGGTGCCTACCACCATGCCAGGCTAATTTTTGTAT...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCTGGGGATACGAGAGCTaGGCAGGCCACAGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPWGYES*AGHSLF
Trigger: AAAAAGACTGTGGCCTGCCCAGCTCTCGTATCCCCA...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGCCTTCATATAGACTGTaGTGTGGTAGGCAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWPSYRL*CGRQSS
Trigger: ACTACTTTGCCTACCACATCACAGTCTATATGAAGG...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCCTTGAGGAACAGGGATaGGTTCGGCACTTAGAGATG +
Preference number: 4 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTLEEQG*VRHLEM
Trigger: CATCTCTAAGTGCCGAACTCATCCCTGTTCCTCAAG...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGGGAGTTATTGTCTCCTaGGAGAATGTTTACCACCAT +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWGVIVS*ENVYHH
Trigger: ATGGTGGTAAACATTCTCTCAGGAGACAATAACTCC...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAACCAAGATCACACCACTaGACTCCAGCCAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEPRSHH*TPARAT
Trigger: TGTGGCCCTGGCTGGAGTTCAGTGGTGTGATCTTGG...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp GTTCGGCACTTAGAGATGGAGTTGGCTTTCCCCGTTGGAGGGAAAGGCATGAGAATAAAACTGATTACATaGAGAGACTGGAATGGAGTT +
Preference number: 4 (lower is better)
Translates to: VRHLEMELAFPVGGKGMRIKLIT*RDWNGV
Trigger: AACTCCATTCCAGTCTCTGCATGTAATCAGTTTTAT...TCTCATGCCTTTCCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTGCCGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTTTCCTCCATGGGTTTTaGATTTCAGGCTCAAGCTAC +
Preference number: 4 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPFLHGF*ISGSSY
Trigger: GTAGCTTGAGCCTGAAATGCAAAACCCATGGAGGAA...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCCATCCTGAGCCCCTCTaGTATGGAATCAGAACCACA +
Preference number: 4 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPHPEPL*YGIRTT
Trigger: TGTGGTTCTGATTCCATACCAGAGGGGCTCAGGATG...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320741.7
CDS-3UTR CCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTAGGACCAATAAGACCTaGATCTCCTTTCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPRTNKT*ISFLTL
Trigger: AAGGGTGAGAAAGGAGATCCAGGTCTTATTGGTCCT...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTATTAGCCATGTGTGGTaGAATGCACCTGAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPISHVW*NAPEVS
Trigger: TGAGACTTCAGGTGCATTCCACCACACATGGCTAAT...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTTTTGAAGAACATCACTaGAGTTATTGTCTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: RCKVTLAGASGKESFLSPFEEHH*SYCLLR
Trigger: TCTCAGGAGACAATAACTCCAGTGATGTTCTTCAAA...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp GGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATGAGACTTGCTGGGGCATCTaGGAAAGAGAGCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GMELILGRYGIQEIGLHETCWGI*ERELPL
Trigger: GAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGT...CTCATGAAGACCAATCTCTTGAATCCCATATCTACCCAGAATTAACTCCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCCAAGGTTACACTTGCTaGGGCATCTGGGAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTQGYTC*GIWERE
Trigger: CTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTG...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTCCAGCTATGTCTCTCTaGGAAACTCATGAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPPAMSL*ETHESS
Trigger: TGAGCTTTCATGAGTTTCCCAGAGAGACATAGCTGG...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCCCGTCTCCTCTGGTATaGAATCAGAACCACAGACTG +
Preference number: 4 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPPSPLV*NQNHRL
Trigger: CAGTCTGTGGTTCTGATTCCATACCAGAGGAGACGG...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444204.2
CDS-3UTR CCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTAAATCCCGTCTCCTCTaGTATGGAATCAGAACCACA +
Preference number: 4 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPKSRLL*YGIRTT
Trigger: TGTGGTTCTGATTCCATACCAGAGGAGACGGGATTT...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444204.2
CDS-3UTR TCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAAGCCTGGAGGAGGCTCTaGGTTAGTGGTGATCAGTTG +
Preference number: 4 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEAWRRL*VSGDQL
Trigger: CAACTGATCACCACTAACTCAGAGCCTCCTCCAGGC...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTATTCTGGACGTGTTCTaGAAATCACAGTCATCCCTA +
Preference number: 4 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPILDVF*KSQSSL
Trigger: TAGGGATGACTGTGATTTTCAGAACACGTCCAGAAT...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGAATATTTCATCCTCCTaGCTCAGTGATTGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWNISSS*LSDWSE
Trigger: TTCTGACCAATCACTGAGTCAGGAGGATGAAATATT...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTACAAAGTCAGGAGTTTaGAACCAACCTGACGAATGT +
Preference number: 4 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPTKSGV*NQPDEC
Trigger: ACATTCGTCAGGTTGGTTTCAAACTCCTGACTTTGT...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAAGCCTGGACAACATGGTaGAATCCCGTCTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEAWTTW*NPVSSG
Trigger: ACCAGAGGAGACGGGATTTCACCATGTTGTCCAGGC...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444204.2
CDS-3UTR GCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGGTAAAAACAGGAGAATaGTTGTTCCCTGTGCCTTAT +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWVKTGE*LFPVPY
Trigger: ATAAGGCACAGGGAACAAGCATTCTCCTGTTTTTAC...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCCTGAGGCACAATAATTaGTTGGACCCAGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPLRHNN*LDPGEG
Trigger: TCCTTCTCCTGGGTCCAAGCAATTATTGTGCCTCAG...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCCATCAGGAGAGACAGTaGGCACAAAATAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTHQERQ*AQNSTV
Trigger: GACAGTGCTATTTTGTGCCCACTGTCTCTCCTGATG...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp GGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATGAGGGAAGGCAAATTCAATaGCTCTCAGGTGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GMELILGRYGIQEIGLHEGRQIQ*LSGEVG
Trigger: TCCCACCTCACCTGAGAGCCATTGAATTTGCCTTCC...CTCATGAAGACCAATCTCTTGAATCCCATATCTACCCAGAATTAACTCCATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTCTTGATGAAAAATTCTaGACGTGTTCTGAAAATCAC +
Preference number: 4 (lower is better)
Translates to: RCKVTLAGASGKESFLSPLDEKF*TCSENH
Trigger: GTGATTTTCAGAACACGTCCAGAATTTTTCATCAAG...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAATCCCACACTGAATGCTaGGCGGTATACATAGGCACC +
Preference number: 4 (lower is better)
Translates to: IGQIHNCTSKHHRTINPESHTEC*AVYIGT
Trigger: GGTGCCTATGTATACCGCTCAGCATTCAGTGTGGGA...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAAATCTGGTCATGTTTGTaGAGCTCCCCAGGACTGGGA +
Preference number: 4 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEIWSCL*SSPGLG
Trigger: TCCCAGTCCTGGGGAGCTTCACAAACATGACCAGAT...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTTTGGGTTTTCTGTTGTaGATGACATTCACAACACAG +
Preference number: 4 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPLGFLL*MTFTTQ
Trigger: CTGTGTTGTGAATGTCATTCACAACAGAAAACCCAA...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTAATATTTCATCCTCCTaGCTCAGTGATTGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPNISSS*LSDWSE
Trigger: TTCTGACCAATCACTGAGTCAGGAGGATGAAATATT...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTGTAAAAACAGGAGAATaGTTGTTCCCTGTGCCTTAT +
Preference number: 4 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPVKTGE*LFPVPY
Trigger: ATAAGGCACAGGGAACAAGCATTCTCCTGTTTTTAC...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGACAGTGTCCCAATTTTaGTTTAGGGAAAATACCTCT +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWTVSQF*FRENTS
Trigger: AGAGGTATTTTCCCTAAAGCAAAATTGGGACACTGT...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp GGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATGAGCCAGGAATGTTGCAGTaGAATTTACCAGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: GMELILGRYGIQEIGLHEPGMLQ*NLPVEP
Trigger: TGGCTCCACTGGTAAATTCCACTGCAACATTCCTGG...CTCATGAAGACCAATCTCTTGAATCCCATATCTACCCAGAATTAACTCCATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCATTAGCCATGTGTGGTaGAATGCACCTGAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTISHVW*NAPEVS
Trigger: TGAGACTTCAGGTGCATTCCACCACACATGGCTAAT...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCTTCCTCTCTCCTCTTTaGGCATCACCAGAAAACATG +
Preference number: 4 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPFLSPL*ASPENM
Trigger: CATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGGAA...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCTTCCTCTCTCCTCTTTaGGCATCACCAGAAAACATG +
Preference number: 4 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTFLSPL*ASPENM
Trigger: CATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGGAA...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCCCAGCTATGTCTCTCTaGGAAACTCATGAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPPAMSL*ETHESS
Trigger: TGAGCTTTCATGAGTTTCCCAGAGAGACATAGCTGG...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAACTTGAGGAACAGGGATaGGTTCGGCACTTAGAGATG +
Preference number: 4 (lower is better)
Translates to: IGQIHNCTSKHHRTINPELEEQG*VRHLEM
Trigger: CATCTCTAAGTGCCGAACTCATCCCTGTTCCTCAAG...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCGGAGTTATTGTCTCCTaGGAGAATGTTTACCACCAT +
Preference number: 4 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPGVIVS*ENVYHH
Trigger: ATGGTGGTAAACATTCTCTCAGGAGACAATAACTCC...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCTCTCTGGGAAACTCATaGAAGCTCAAACACAGCATT +
Preference number: 4 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTSLGNS*KLKHSI
Trigger: AATGCTGTGTTTGAGCTTTCATGAGTTTCCCAGAGA...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp GGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATGAGTCTCTGAGGAAGCTCTaGTTGGGGGAGGTTTTAATT +
Preference number: 4 (lower is better)
Translates to: GMELILGRYGIQEIGLHESLRKL*LGEVLI
Trigger: AATTAAAACCTCCCCCAAGCAGAGCTTCCTCAGAGA...CTCATGAAGACCAATCTCTTGAATCCCATATCTACCCAGAATTAACTCCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGATAAAACTGATTACATaGAGAGACTGGAATGGAGTT +
Preference number: 4 (lower is better)
Translates to: PLSSLGITRKHDVHLARWIKLIT*RDWNGV
Trigger: AACTCCATTCCAGTCTCTGCATGTAATCAGTTTTAT...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAAGGAAGGCAAATTCAATaGCTCTCAGGTGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEGRQIQ*LSGEVG
Trigger: TCCCACCTCACCTGAGAGCCATTGAATTTGCCTTCC...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp GGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATGAGAATACAAAAATTAGCTaGGCGCAGTGGCATGAGCCT +
Preference number: 4 (lower is better)
Translates to: GMELILGRYGIQEIGLHENTKIS*AQWHEP
Trigger: AGGCTCATGCCACTGCGCCCAGCTAATTTTTGTATT...CTCATGAAGACCAATCTCTTGAATCCCATATCTACCCAGAATTAACTCCATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp GGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATGAGTGGCAAAATAAAAAGTaGGATATCGACTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: GMELILGRYGIQEIGLHEWQNKK*DIDWAW
Trigger: CCATGCCCAGTCGATATCTCACTTTTTATTTTGCCA...CTCATGAAGACCAATCTCTTGAATCCCATATCTACCCAGAATTAACTCCATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp TATCTGGTCATGTTTGTGAAGCTCCCCAGGACTGGGAACATAGCATATGATTTTAGAGATTGGTCTTCATaGGGCATTTATCAAGGATCT +
Preference number: 4 (lower is better)
Translates to: YLVMFVKLPRTGNIAYDFRDWSS*GIYQGS
Trigger: AGATCCTTGATAAATGCCTCATGAAGACCAATCTCT...AAAATCATATGCTATGTTCCCAGTCCTGGGGAGCTTCACAAACATGACCAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCAGAGATTGGTCTTCATaGGGCATTTATCAAGGATCT +
Preference number: 4 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTRDWSS*GIYQGS
Trigger: AGATCCTTGATAAATGCCTCATGAAGACCAATCTCT...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp GGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATGAGATTCTGGACGTGTTCTaGAAATCACAGTCATCCCTA +
Preference number: 4 (lower is better)
Translates to: GMELILGRYGIQEIGLHEILDVF*KSQSSL
Trigger: TAGGGATGACTGTGATTTTCAGAACACGTCCAGAAT...CTCATGAAGACCAATCTCTTGAATCCCATATCTACCCAGAATTAACTCCATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCTTGGGTTTTCTGTTGTaGATGACATTCACAACACAG +
Preference number: 4 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTLGFLL*MTFTTQ
Trigger: CTGTGTTGTGAATGTCATTCACAACAGAAAACCCAA...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR GCA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCCATTTATCAAGGATCTaGAAGGGATTTAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPHLSRI*KGFRGD
Trigger: GTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAACCAGGAATGTTGCAGTaGAATTTACCAGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEPGMLQ*NLPVEP
Trigger: TGGCTCCACTGGTAAATTCCACTGCAACATTCCTGG...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAACATCAGGAGAGACAGTaGGCACAAAATAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEHQERQ*AQNSTV
Trigger: GACAGTGCTATTTTGTGCCCACTGTCTCTCCTGATG...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCGTTTTCTGTTGTGAATaGCATTCACAACACAGAGTT +
Preference number: 4 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTVFCCE*HSQHRV
Trigger: AACTCTGTGTTGTGAATGTCATTCACAACAGAAAAC...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp GGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATGAGAGTGGAATTTACCAGTaGAGCCATCATAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: GMELILGRYGIQEIGLHESGIYQ*SHHSGF
Trigger: AAAACCACTATGATGGCTCCACTGGTAAATTCCACT...CTCATGAAGACCAATCTCTTGAATCCCATATCTACCCAGAATTAACTCCATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CCA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCTTTGAAGAACATCACTaGAGTTATTGTCTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTFEEHH*SYCLLR
Trigger: TCTCAGGAGACAATAACTCCAGTGATGTTCTTCAAA...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAACCTTCATATAGACTGTaGTGTGGTAGGCAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEPSYRL*CGRQSS
Trigger: ACTACTTTGCCTACCACATCACAGTCTATATGAAGG...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp GGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATGAGGTTTTCTGTTGTGAATaGCATTCACAACACAGAGTT +
Preference number: 4 (lower is better)
Translates to: GMELILGRYGIQEIGLHEVFCCE*HSQHRV
Trigger: AACTCTGTGTTGTGAATGTCATTCACAACAGAAAAC...CTCATGAAGACCAATCTCTTGAATCCCATATCTACCCAGAATTAACTCCATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR TCA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAACAGCTGAACAAGGATTaGTACTTAAAACCAGGGATT +
Preference number: 4 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEQLNKD*YLKPGI
Trigger: AATCCCTGGTTTTAAGTATCAATCCTTGTTCAGCTG...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS CCA 90 bp CCGGATGCCCTGGGATGCCCGCCATCCAACCTGTGCAGGCCCCCTTaGGCAGGGGAAGCAGGACTCCGGGCCCTTGAGTCGTGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: PDALGCPPSNLCRPP*AGEAGLRALESWFP
Trigger: AGGAAACCACGACTCAAGGGCCCGGAGTCCTGCTTCCCCTGCCCAAGGGGGCCTGCACAGGTTGGATGGCGGGCATCCCAGGGCATCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACCACCTGGAGCCAGACTaGGTCGCCCACCTCCAGATG +
Preference number: 5 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDHLEPD*VAHLQM
Trigger: CATCTGGAGGTGGGCGACCAAGTCTGGCTCCAGGTG...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS CCA 90 bp AGGCCCCCTTGGGCAGGGGAAGCAGGACTCCGGGCCCTTGAGTCGTaGTTTCCTGGTCATGACCGGGCAGAGCTAATAGCAGTAGAACAG +
Preference number: 5 (lower is better)
Translates to: RPPWAGEAGLRALES*FPGHDRAELIAVEQ
Trigger: CTGTTCTACTGCTATTAGCTCTGCCCGGTCATGACCAGGAAACCACGACTCAAGGGCCCGGAGTCCTGCTTCCCCTGCCCAAGGGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS GCA 90 bp CCTTCCCCATACACCTGGAGCCAGACTTGGTCGCCCACCTCCAGATaGAGGAGCACAGAGCCGGAGGCCTGGTCCACATTATTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: PSPYTWSQTWSPTSR*RSTEPEAWSTLFSW
Trigger: CCAGGAAAATAATGTGGACCAGGCCTCCGGCTCTGTGCTCCTGCATCTGGAGGTGGGCGACCAAGTCTGGCTCCAGGTGTATGGGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACTTCTCCTTTCCTGCCTaGGATTCCCGGAAAGCCTCG +
Preference number: 5 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDFSFPA*DSRKAS
Trigger: CGAGGCTTTCCGGGAATCCAAGGCAGGAAAGGAGAA...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACGATGCAAGGTTACACTaGCTGGGGCATCTGGGAAAG +
Preference number: 5 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDDARLH*LGHLGK
Trigger: CTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATC...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACCTCTTTTGGCCTCAGTaGACTCTCTCTGTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDLFWPQ*TLSVPL
Trigger: CAGAGGCACAGAGAGAGTCAACTGAGGCCAAAAGAG...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACTCTCTCAGGCCTCTTTaGGCCTCAGTTGACTCTCTC +
Preference number: 5 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDSLRPL*ASVDSL
Trigger: GAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGA...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS GCA 90 bp ATGCTGAGCGGTATACATAGGCACCTTCTCCAGGTTCTCCTTTCCTaGCTTGGATTCCCGGAAAGCCTCGGGGACCTTCAGCCCCGGGTA +
Preference number: 5 (lower is better)
Translates to: MLSGIHRHLLQVLLS*LGFPESLGDLQPRV
Trigger: TACCCGGGGCTGAAGGTCCCCGAGGCTTTCCGGGAATCCAAGGCAGGAAAGGAGAACCTGGAGAAGGTGCCTATGTATACCGCTCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp GTTCGGCACTTAGAGATGGAGTTGGCTTTCCCCGTTGGAGGGAAAGGCATGAGAGTAGTGCAGGGGCCATaGAGTAGTAGTCCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: VRHLEMELAFPVGGKGMRVVQGP*SSSPSK
Trigger: CTTGGAAGGACTACTACTCAATGGCCCCTGCACTAC...TCTCATGCCTTTCCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTGCCGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp GTTCGGCACTTAGAGATGGAGTTGGCTTTCCCCGTTGGAGGGAAAGGCATGAGACTCTTTTGGCCTCAGTaGACTCTCTCTGTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: VRHLEMELAFPVGGKGMRLFWPQ*TLSVPL
Trigger: CAGAGGCACAGAGAGAGTCAACTGAGGCCAAAAGAG...TCTCATGCCTTTCCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTGCCGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp GTTCGGCACTTAGAGATGGAGTTGGCTTTCCCCGTTGGAGGGAAAGGCATGAGAGCTGAGGCAGGAGAATaGCTCATGGTAGAGGTAGCA +
Preference number: 5 (lower is better)
Translates to: VRHLEMELAFPVGGKGMRAEAGE*LMVEVA
Trigger: TGCTACCTCTACCATGAGCAATTCTCCTGCCTCAGC...TCTCATGCCTTTCCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTGCCGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTAGGCACAATAATTGCTaGGACCCAGGAGAAGGAGGC +
Preference number: 5 (lower is better)
Translates to: RCKVTLAGASGKESFLSPRHNNC*DPGEGG
Trigger: GCCTCCTTCTCCTGGGTCCAAGCAATTATTGTGCCT...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp GTTCGGCACTTAGAGATGGAGTTGGCTTTCCCCGTTGGAGGGAAAGGCATGAGATCTTCCCTGACCCTGTaGGTACTCAAGGAGACAATG +
Preference number: 5 (lower is better)
Translates to: VRHLEMELAFPVGGKGMRSSLTL*VLKETM
Trigger: CATTGTCTCCTTGAGTACCAACAGGGTCAGGGAAGA...TCTCATGCCTTTCCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTGCCGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCCAGGCCACAGTCTTTTaGATATCGGGAGGGAAACCC +
Preference number: 5 (lower is better)
Translates to: LTSVSLRPLLASVDSLCAQATVF*ISGGKP
Trigger: GGGTTTCCCTCCCGATATCAAAAAGACTGTGGCCTG...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CCTTCCTGGGCAGTTGCCTCTAGCCTGGTGGGAGGTGTTCCTCACACCCAGGACCACAGCATTAAGAGTTaGTTGTGGACAGGTATTATT +
Preference number: 5 (lower is better)
Translates to: PSWAVASSLVGGVPHTQDHSIKS*LWTGII
Trigger: AATAATACCTGTCCACAACAAACTCTTAATGCTGTG...GTCCTGGGTGTGAGGAACACCTCCCACCAGGCTAGAGGCAACTGCCCAGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCCAGGACTCCGGGCCCTaGAGTCGTGGTTTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTQDSGP*SRGFLV
Trigger: GACCAGGAAACCACGACTCAAGGGCCCGGAGTCCTG...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTGTGAAGAGCATAGCCTaGTCCTTCTTGAAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: RCKVTLAGASGKESFLSPVKSIA*SFLKRL
Trigger: CAGCCTCTTCAAGAAGGACAAGGCTATGCTCTTCAC...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCTCTTCCCTGACCCTGTaGGTACTCAAGGAGACAATG +
Preference number: 5 (lower is better)
Translates to: LTSVSLRPLLASVDSLCASSLTL*VLKETM
Trigger: CATTGTCTCCTTGAGTACCAACAGGGTCAGGGAAGA...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS TCA 90 bp CATGTTGGGGATAGTAACGTAAGTCTCCAATCCCACACTGAATGCTaGGCGGTATACATAGGCACCTTCTCCAGGTTCTCCTTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: HVGDSNVSLQSHTEC*AVYIGTFSRFSFPA
Trigger: GGCAGGAAAGGAGAACCTGGAGAAGGTGCCTATGTATACCGCTCAGCATTCAGTGTGGGATTGGAGACTTACGTTACTATCCCCAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTTACAGCCCAGGAATGTaGCAGTGGAATTTACCAGTG +
Preference number: 5 (lower is better)
Translates to: RCKVTLAGASGKESFLSPYSPGM*QWNLPV
Trigger: CACTGGTAAATTCCACTGCAACATTCCTGGGCTGTA...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTATAGCCTTGTCCTTCTaGAAGAGGCTGACCTTCACA +
Preference number: 5 (lower is better)
Translates to: RCKVTLAGASGKESFLSPIALSF*KRLTFT
Trigger: TGTGAAGGTCAGCCTCTTCAAGAAGGACAAGGCTAT...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCTCCACAGCTCTGGGTTaGATTTCTAGCACTGTCACT +
Preference number: 5 (lower is better)
Translates to: LTSVSLRPLLASVDSLCASTALG*ISSTVT
Trigger: AGTGACAGTGCTAGAAATCAAACCCAGAGCTGTGGA...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCCTGAGGAAGCTCTGCTaGGGGGAGGTTTTAATTCAT +
Preference number: 5 (lower is better)
Translates to: LTSVSLRPLLASVDSLCALRKLC*GEVLIH
Trigger: ATGAATTAAAACCTCCCCCAAGCAGAGCTTCCTCAG...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp GTTCGGCACTTAGAGATGGAGTTGGCTTTCCCCGTTGGAGGGAAAGGCATGAGAGCTCAAGCTACCTTCTaGATGAAAAATTCTGGACGT +
Preference number: 5 (lower is better)
Translates to: VRHLEMELAFPVGGKGMRAQATF*MKNSGR
Trigger: ACGTCCAGAATTTTTCATCAAGAAGGTAGCTTGAGC...TCTCATGCCTTTCCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTGCCGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTTCTCTCAGGCCTCTTTaGGCCTCAGTTGACTCTCTC +
Preference number: 5 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPSLRPL*ASVDSL
Trigger: GAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGA...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAACAGGACTCCGGGCCCTaGAGTCGTGGTTTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEQDSGP*SRGFLV
Trigger: GACCAGGAAACCACGACTCAAGGGCCCGGAGTCCTG...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCTTCTCCTTTCCTGCCTaGGATTCCCGGAAAGCCTCG +
Preference number: 5 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPFSFPA*DSRKAS
Trigger: CGAGGCTTTCCGGGAATCCAAGGCAGGAAAGGAGAA...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTGTGAAGAGCATAGCCTaGTCCTTCTTGAAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPVKSIA*SFLKRL
Trigger: CAGCCTCTTCAAGAAGGACAAGGCTATGCTCTTCAC...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAACACCTGGAGCCAGACTaGGTCGCCCACCTCCAGATG +
Preference number: 5 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEHLEPD*VAHLQM
Trigger: CATCTGGAGGTGGGCGACCAAGTCTGGCTCCAGGTG...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCCACTTAGAGATGGAGTaGGCTTTCCCCGTTGGAGGG +
Preference number: 5 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPHLEME*AFPVGG
Trigger: CCCTCCAACGGGGAAAGCCAACTCCATCTCTAAGTG...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTCTGAGGAAGCTCTGCTaGGGGGAGGTTTTAATTCAT +
Preference number: 5 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPLRKLC*GEVLIH
Trigger: ATGAATTAAAACCTCCCCCAAGCAGAGCTTCCTCAG...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCGTAGTGCAGGGGCCATaGAGTAGTAGTCCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPVVQGP*SSSPSK
Trigger: CTTGGAAGGACTACTACTCAATGGCCCCTGCACTAC...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGATTCCTCCATGGGTTTaGCATTTCAGGCTCAAGCTA +
Preference number: 5 (lower is better)
Translates to: PLSSLGITRKHDVHLARWIPPWV*HFRLKL
Trigger: TAGCTTGAGCCTGAAATGCAAAACCCATGGAGGAAT...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCAGGGTCTTGATTGTTTaGAGCTTTGGTTCAAACCTT +
Preference number: 5 (lower is better)
Translates to: LTSVSLRPLLASVDSLCARVLIV*SFGSNL
Trigger: AAGGTTTGAACCAAAGCTCAAAACAATCAAGACCCT...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp TATCTGGTCATGTTTGTGAAGCTCCCCAGGACTGGGAACATAGCATATGATTTTCAGGCCACAGTCTTTTaGATATCGGGAGGGAAACCC +
Preference number: 5 (lower is better)
Translates to: YLVMFVKLPRTGNIAYDFQATVF*ISGGKP
Trigger: GGGTTTCCCTCCCGATATCAAAAAGACTGTGGCCTG...AAAATCATATGCTATGTTCCCAGTCCTGGGGAGCTTCACAAACATGACCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp TATCTGGTCATGTTTGTGAAGCTCCCCAGGACTGGGAACATAGCATATGATTTTGATGCAAGGTTACACTaGCTGGGGCATCTGGGAAAG +
Preference number: 5 (lower is better)
Translates to: YLVMFVKLPRTGNIAYDFDARLH*LGHLGK
Trigger: CTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATC...AAAATCATATGCTATGTTCCCAGTCCTGGGGAGCTTCACAAACATGACCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCTGGACAGGTATTATTTaGCATCTATCATCCACTCTC +
Preference number: 5 (lower is better)
Translates to: LTSVSLRPLLASVDSLCAWTGII*HLSSTL
Trigger: GAGAGTGGATGATAGATGCAAAATAATACCTGTCCA...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTTGGACAAATCCACAATaGTACTTCAAAGCATCACAG +
Preference number: 5 (lower is better)
Translates to: RCKVTLAGASGKESFLSPWTNPQ*YFKASQ
Trigger: CTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCA...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGGCTCAAGCTACCTTCTaGATGAAAAATTCTGGACGT +
Preference number: 5 (lower is better)
Translates to: PLSSLGITRKHDVHLARWAQATF*MKNSGR
Trigger: ACGTCCAGAATTTTTCATCAAGAAGGTAGCTTGAGC...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp TTGACCTCAGTTTCTCTCAGGCCTCTTTTGGCCTCAGTTGACTCTCTCTGTGCCATACAGAAAAGGGTCTaGATTGTTTTGAGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: LTSVSLRPLLASVDSLCAIQKRV*IVLSFG
Trigger: ACCAAAGCTCAAAACAATCAAGACCCTTTTCTGTAT...GGCACAGAGAGAGTCAACTGAGGCCAAAAGAGGCCTGAGAGAAACTGAGGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp AGATGCAAGGTTACACTTGCTGGGGCATCTGGGAAAGAGAGCTTCCTCTCTCCTATACAGAAAAGGGTCTaGATTGTTTTGAGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: RCKVTLAGASGKESFLSPIQKRV*IVLSFG
Trigger: ACCAAAGCTCAAAACAATCAAGACCCTTTTCTGTAT...AGGAGAGAGGAAGCTCTCTTTCCCAGATGCCCCAGCAAGTGTAACCTTGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp GGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATGAGGCTGAGGCAGGAGAATaGCTCATGGTAGAGGTAGCA +
Preference number: 5 (lower is better)
Translates to: GMELILGRYGIQEIGLHEAEAGE*LMVEVA
Trigger: TGCTACCTCTACCATGAGCAATTCTCCTGCCTCAGC...CTCATGAAGACCAATCTCTTGAATCCCATATCTACCCAGAATTAACTCCATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCTACAGCCCAGGAATGTaGCAGTGGAATTTACCAGTG +
Preference number: 5 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTYSPGM*QWNLPV
Trigger: CACTGGTAAATTCCACTGCAACATTCCTGGGCTGTA...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CCTCTCTCCTCTTTGGGCATCACCAGAAAACATGATGTCCATTTAGCCAGATGGATGGGATTCAAGAGATaGGTCTTCATGAGGCATTTA +
Preference number: 5 (lower is better)
Translates to: PLSSLGITRKHDVHLARWMGFKR*VFMRHL
Trigger: TAAATGCCTCATGAAGACCAATCTCTTGAATCCCAT...CCATCTGGCTAAATGGACATCATGTTTTCTGGTGATGCCCAAAGAGGAGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTCCAGCTGAACAAGGATaGATACTTAAAACCAGGGAT +
Preference number: 5 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPPAEQG*ILKTRD
Trigger: ATCCCTGGTTTTAAGTATCAATCCTTGTTCAGCTGG...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTATGGGATTCAAGAGATaGGTCTTCATGAGGCATTTA +
Preference number: 5 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPMGFKR*VFMRHL
Trigger: TAAATGCCTCATGAAGACCAATCTCTTGAATCCCAT...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTAGGGTCTTGATTGTTTaGAGCTTTGGTTCAAACCTT +
Preference number: 5 (lower is better)
Translates to: HLSRICKGFRGDGSTVLPRVLIV*SFGSNL
Trigger: AAGGTTTGAACCAAAGCTCAAAACAATCAAGACCCT...AGGAAGGACTGTGCTTCCGTCACCTCTAAATCCCTTGCAGATCCTTGATAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp TATCTGGTCATGTTTGTGAAGCTCCCCAGGACTGGGAACATAGCATATGATTTTCCAGCTGAACAAGGATaGATACTTAAAACCAGGGAT +
Preference number: 5 (lower is better)
Translates to: YLVMFVKLPRTGNIAYDFPAEQG*ILKTRD
Trigger: ATCCCTGGTTTTAAGTATCAATCCTTGTTCAGCTGG...AAAATCATATGCTATGTTCCCAGTCCTGGGGAGCTTCACAAACATGACCAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp CACTGTCAACTACTTCTTTCTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCCTAATCAAAAGAAAGTaGACCAGGTGTGATGGCTCA +
Preference number: 5 (lower is better)
Translates to: HCQLLLSSQLSGHVCEAPLIKRK*TRCDGS
Trigger: TGAGCCATCACACCTGGTCAACTTTCTTTTGATTAG...GGGAGCTTCACAAACATGACCAGATAACTGACTAGAAAGAAGTAGTTGACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp GAACATCACTGGAGTTATTGTCTCCTGAGAGAATGTTTACCACCATCAACTACCCTAATCAAAAGAAAGTaGACCAGGTGTGATGGCTCA +
Preference number: 5 (lower is better)
Translates to: EHHWSYCLLRECLPPSTTLIKRK*TRCDGS
Trigger: TGAGCCATCACACCTGGTCAACTTTCTTTTGATTAG...GGTAGTTGATGGTGGTAAACATTCTCTCAGGAGACAATAACTCCAGTGATGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAATCCACAGCTCTGGGTTaGATTTCTAGCACTGTCACT +
Preference number: 5 (lower is better)
Translates to: IGQIHNCTSKHHRTINPESTALG*ISSTVT
Trigger: AGTGACAGTGCTAGAAATCAAACCCAGAGCTGTGGA...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAAATTCCTCCATGGGTTTaGCATTTCAGGCTCAAGCTA +
Preference number: 5 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEIPPWV*HFRLKL
Trigger: TAGCTTGAGCCTGAAATGCAAAACCCATGGAGGAAT...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp GGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATGAGACATCACTGGAGTTATaGTCTCCTGAGAGAATGTTT +
Preference number: 5 (lower is better)
Translates to: GMELILGRYGIQEIGLHETSLEL*SPERMF
Trigger: AAACATTCTCTCAGGAGACAATAACTCCAGTGATGT...CTCATGAAGACCAATCTCTTGAATCCCATATCTACCCAGAATTAACTCCATTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp TATCTGGTCATGTTTGTGAAGCTCCCCAGGACTGGGAACATAGCATATGATTTTCACAGCATTAAGAGTTaGTTGTGGACAGGTATTATT +
Preference number: 5 (lower is better)
Translates to: YLVMFVKLPRTGNIAYDFHSIKS*LWTGII
Trigger: AATAATACCTGTCCACAACAAACTCTTAATGCTGTG...AAAATCATATGCTATGTTCCCAGTCCTGGGGAGCTTCACAAACATGACCAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAAGCCATCATAGTGGTTTaGCTGATTGTAGAAGATCTT +
Preference number: 5 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEAIIVV*LIVEDL
Trigger: AAGATCTTCTACAATCAGCAAAACCACTATGATGGC...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAATGGACAGGTATTATTTaGCATCTATCATCCACTCTC +
Preference number: 5 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEWTGII*HLSSTL
Trigger: GAGAGTGGATGATAGATGCAAAATAATACCTGTCCA...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS-3UTR CAA 90 bp ATTGGACAAATCCACAATTGTACTTCAAAGCATCACAGGACCATTAATCCTGAATGGACAAATCCACAATaGTACTTCAAAGCATCACAG +
Preference number: 5 (lower is better)
Translates to: IGQIHNCTSKHHRTINPEWTNPQ*YFKASQ
Trigger: CTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCA...TTCAGGATTAATGGTCCTGTGATGCTTTGAAGTACAATTGTGGATTTGTCCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS CCA 72 bp CTGGGATGCCCGCCATCCAACCTGTGCAGGCCCCCTTaGGCAGGGGAAGCAGGACTCCGGGCCCTTGAGTCG +
Preference number: 6 (lower is better)
Translates to: LGCPPSNLCRPP*AGEAGLRALES
Trigger: CGACTCAAGGGCCCGGAGTCCTGCTTCCCCTGCCCAAGGGGGCCTGCACAGGTTGGATGGCGGGCATCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS CAA 72 bp GGCCCCCTTGGGCAGGGGAAGCAGGACTCCGGGCCCTaGAGTCGTGGTTTCCTGGTCATGACCGGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: GPLGQGKQDSGP*SRGFLVMTGQS
Trigger: GCTCTGCCCGGTCATGACCAGGAAACCACGACTCAAGGGCCCGGAGTCCTGCTTCCCCTGCCCAAGGGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS GCA 72 bp TACACCTGGAGCCAGACTTGGTCGCCCACCTCCAGATaGAGGAGCACAGAGCCGGAGGCCTGGTCCACATTA +
Preference number: 6 (lower is better)
Translates to: YTWSQTWSPTSR*RSTEPEAWSTL
Trigger: TAATGTGGACCAGGCCTCCGGCTCTGTGCTCCTGCATCTGGAGGTGGGCGACCAAGTCTGGCTCCAGGTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS CCA 72 bp TGGGCAGGGGAAGCAGGACTCCGGGCCCTTGAGTCGTaGTTTCCTGGTCATGACCGGGCAGAGCTAATAGCA +
Preference number: 6 (lower is better)
Translates to: WAGEAGLRALES*FPGHDRAELIA
Trigger: TGCTATTAGCTCTGCCCGGTCATGACCAGGAAACCACGACTCAAGGGCCCGGAGTCCTGCTTCCCCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS CCA 72 bp TTACGCTCTCCTTCCCCATACACCTGGAGCCAGACTTaGTCGCCCACCTCCAGATGCAGGAGCACAGAGCCG +
Preference number: 6 (lower is better)
Translates to: LRSPSPYTWSQT*SPTSRCRSTEP
Trigger: CGGCTCTGTGCTCCTGCATCTGGAGGTGGGCGACCAAGTCTGGCTCCAGGTGTATGGGGAAGGAGAGCGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS CAA 90 bp ATAGAGTCCATTACGCTCTCCTTCCCCATACACCTGGAGCCAGACTaGGTCGCCCACCTCCAGATGCAGGAGCACAGAGCCGGAGGCCTG +
Preference number: 6 (lower is better)
Translates to: IESITLSFPIHLEPD*VAHLQMQEHRAGGL
Trigger: CAGGCCTCCGGCTCTGTGCTCCTGCATCTGGAGGTGGGCGACCAAGTCTGGCTCCAGGTGTATGGGGAAGGAGAGCGTAATGGACTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS CAA 72 bp ATTACGCTCTCCTTCCCCATACACCTGGAGCCAGACTaGGTCGCCCACCTCCAGATGCAGGAGCACAGAGCC +
Preference number: 6 (lower is better)
Translates to: ITLSFPIHLEPD*VAHLQMQEHRA
Trigger: GGCTCTGTGCTCCTGCATCTGGAGGTGGGCGACCAAGTCTGGCTCCAGGTGTATGGGGAAGGAGAGCGTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS CCA 72 bp CCTGGACAACATGGTGAAATCCCGTCTCCTCTGGTATaGAATCAGAACCACAGACTGCAGTCAGAATGGAAG +
Preference number: 6 (lower is better)
Translates to: PGQHGEIPSPLV*NQNHRLQSEWK
Trigger: CTTCCATTCTGACTGCAGTCTGTGGTTCTGATTCCATACCAGAGGAGACGGGATTTCACCATGTTGTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444204.2
CDS TCA 72 bp GATAGTAACGTAAGTCTCCAATCCCACACTGAATGCTaGGCGGTATACATAGGCACCTTCTCCAGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: DSNVSLQSHTEC*AVYIGTFSRFS
Trigger: GGAGAACCTGGAGAAGGTGCCTATGTATACCGCTCAGCATTCAGTGTGGGATTGGAGACTTACGTTACTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS CAA 90 bp AGGAATGTTGCAGTGGAATTTACCAGTGGAGCCATCATAGTGGTTTaGCTGATTGTAGAAGATCTTGGTAAAGCGAATGGGCATGTTGGG +
Preference number: 6 (lower is better)
Translates to: RNVAVEFTSGAIIVV*LIVEDLGKANGHVG
Trigger: CCCAACATGCCCATTCGCTTTACCAAGATCTTCTACAATCAGCAAAACCACTATGATGGCTCCACTGGTAAATTCCACTGCAACATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS CCA 72 bp AGTACAGCCCAGGAATGTTGCAGTGGAATTTACCAGTaGAGCCATCATAGTGGTTTTGCTGATTGTAGAAGA +
Preference number: 6 (lower is better)
Translates to: STAQECCSGIYQ*SHHSGFADCRR
Trigger: TCTTCTACAATCAGCAAAACCACTATGATGGCTCCACTGGTAAATTCCACTGCAACATTCCTGGGCTGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2
CDS CAA 72 bp GCAGTGGAATTTACCAGTGGAGCCATCATAGTGGTTTaGCTGATTGTAGAAGATCTTGGTAAAGCGAATGGG +
Preference number: 6 (lower is better)
Translates to: AVEFTSGAIIVV*LIVEDLGKANG
Trigger: CCCATTCGCTTTACCAAGATCTTCTACAATCAGCAAAACCACTATGATGGCTCCACTGGTAAATTCCACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320741.7
ENST00000444204.2