RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADH6 (Homo sapiens)

Ensembl gene IDs: ENSG00000172955

Ensembl transcript IDs: ENST00000237653.11, ENST00000394897.5, ENST00000394899.6, ENST00000504257.1, ENST00000507484.5, ENST00000508558.1, ENST00000512708.5, ENST00000513262.1

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCAGGCAACACCCCAACAACCACACAGACCCCATAGCTCTCATTaGAGGAGGCGAGGGCAGCTGCCAGAACGTCCAGATTTCCAATGG +
Preference number: 1 (lower is better)
Translates to: WQATPQQPHRPHSSH*RRRGQLPERPDFQW
Trigger: CCATTGGAAATCTGGACGTTCTGGCAGCTGCCCTCGCCTCCTGCAATGAGAGCTATGGGGTCTGTGTGGTTGTTGGGGTGTTGCCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507484.5
3UTR CCA 90 bp AGGGCACTTAACCTTAGTCCTAATTCTAGGAGAACTAAGAGGGGCTaGGGCAGAAAGTCAAAGGGTCGGGGTAGAAGGATTGGATGCCAC +
Preference number: 1 (lower is better)
Translates to: RALNLSPNSRRTKRG*GRKSKGRGRRIGCH
Trigger: GTGGCATCCAATCCTTCTACCCCGACCCTTTGACTTTCTGCCCCAGCCCCTCTTAGTTCTCCTAGAATTAGGACTAAGGTTAAGTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR TCA 90 bp CTGGAGCAGAAGAGTCTGCAACTAGGAAGGGAACTCTTGTGTGTATaGGGGTTGGTAATAGGCTCTTTTTGTATCAAGAGGAAGGGAAGG +
Preference number: 1 (lower is better)
Translates to: LEQKSLQLGRELLCV*GLVIGSFCIKRKGR
Trigger: CCTTCCCTTCCTCTTGATACAAAAAGAGCCTATTACCAACCCTCATACACACAAGAGTTCCCTTCCTAGTTGCAGACTCTTCTGCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR CCA 90 bp TTCAATAAACTCATTAATGCGGAGTTTTGTTTCTTTAGAGTAAAATaGCAGAGTTTCATGTCTAGGCCTGTGAGAGAGACATATAGTGTA +
Preference number: 1 (lower is better)
Translates to: FNKLINAEFCFFRVK*QSFMSRPVRETYSV
Trigger: TACACTATATGTCTCTCTCACAGGCCTAGACATGAAACTCTGCCATTTTACTCTAAAGAAACAAAACTCCGCATTAATGAGTTTATTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR TCA 90 bp CACCCCAACAACCACACAGACCCCATAGCTCTCATTGCAGGAGGCGAGGGCAGCATGCCATTGAGTTGGTaGAATATCCTTTGGGTCTTG +
Preference number: 2 (lower is better)
Translates to: HPNNHTDPIALIAGGEGSMPLSW*NILWVL
Trigger: CAAGACCCAAAGGATATTTCACCAACTCAATGGCAT...GCTGCCCTCGCCTCCTGCAATGAGAGCTATGGGGTCTGTGTGGTTGTTGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507484.5
3UTR-3UTR TCA 90 bp GAGCAGAGCAGAGTTGGGCATGGAGGCTCCAGCTCAGACTTGGGAAGATGGAGAGGGAGCATCTTGCATTaGCCTTTTATGTCTGAAGGA +
Preference number: 2 (lower is better)
Translates to: EQSRVGHGGSSSDLGRWRGSILH*PFMSEG
Trigger: TCCTTCAGACATAAAAGGTCAATGCAAGATGCTCCC...TCTCCATCTTCCCAAGTCTGAGCTGGAGCCTCCATGCCCAACTCTGCTCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR TCA 90 bp GCGAGGGCAGCTGCCAGAACGTCCAGATTTCCAATGGCCTCAAAGCAGAAGTCTGGTTTCTTTAAGTCCTaGGGGTTGAGGCACTCAGTA +
Preference number: 2 (lower is better)
Translates to: ARAAARTSRFPMASKQKSGFFKS*GLRHSV
Trigger: TACTGAGTGCCTCAACCCTCAGGACTTAAAGAAACC...AGACTTCTGCTTTGAGGCCATTGGAAATCTGGACGTTCTGGCAGCTGCCCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507484.5
3UTR-3UTR GCA 90 bp AAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAGTCCCCCATAGCTCTCATTaGAGGAGGCGAGGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: KWLGQKPDIGPLRSESEVPHSSH*RRRGQL
Trigger: CAGCTGCCCTCGCCTCCTGCAATGAGAGCTATGGGG...GACTTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507484.5
3UTR-3UTR TCA 90 bp CGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTCCTCCAAGTTCTCATCATGTCTAGGCCTGTaGGAGAGACATATAGTGTAC +
Preference number: 2 (lower is better)
Translates to: RFRENLDFPRPEDSSKFSSCLGL*ERHIVY
Trigger: GTACACTATATGTCTCTCTCACAGGCCTAGACATGA...TGAGAACTTGGAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR TCA 90 bp TCCTCCAAGTTCTCACTGTTAGTAAGGTCAATTTGGGGGCAGAACAGGAACATGCCCATCTCCTCTATTTaGAGGAAGCAGGCCCCTAAA +
Preference number: 2 (lower is better)
Translates to: SSKFSLLVRSIWGQNRNMPISSI*RKQAPK
Trigger: TTTAGGGGCCTGCTTCCTTCAAATAGAGGAGATGGG...CATGTTCCTGTTCTGCCCCCAAATTGACCTTACTAACAGTGAGAACTTGGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR GCA 90 bp TACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTCCTCGGCAGAACAGGAACATaGCTTAGCTGCTGTCAGGAA +
Preference number: 2 (lower is better)
Translates to: YNKTFPGKLGFPKTRRLLGRTGT*LSCCQE
Trigger: TTCCTGACAGCAGCTAAGGCATGTTCCTGTTCTGCC...GAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR GCA 90 bp CACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGTCAGTATACAGCTTCTaGAGCAGGGACGACCCTTCT +
Preference number: 2 (lower is better)
Translates to: HCLQQNVSGKTWISQDPKSVYSF*SRDDPS
Trigger: AGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGA...CTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394897.5
3UTR-3UTR CCA 90 bp AAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAGTCGGGAATGCCAGTTTCTaGGTTATGGCTGGTTTCTGT +
Preference number: 2 (lower is better)
Translates to: KWLGQKPDIGPLRSESEVGNASF*VMAGFC
Trigger: ACAGAAACCAGCCATAACCCAGAAACTGGCATTCCC...GACTTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394897.5
3UTR-3UTR TCA 90 bp AAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAGTCTCATGTCTAGGCCTGTaGGAGAGACATATAGTGTAC +
Preference number: 2 (lower is better)
Translates to: KWLGQKPDIGPLRSESEVSCLGL*ERHIVY
Trigger: GTACACTATATGTCTCTCTCACAGGCCTAGACATGA...GACTTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR TCA 90 bp TACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTCCTCGAACTCTTGTGTGTATaGGGGTTGGTAATAGGCTCT +
Preference number: 2 (lower is better)
Translates to: YNKTFPGKLGFPKTRRLLELLCV*GLVIGS
Trigger: AGAGCCTATTACCAACCCTCATACACACAAGAGTTC...GAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR GCA 90 bp CACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGCAAAGTTTACTGACATaGAGGGACCCCTGTGTGATC +
Preference number: 2 (lower is better)
Translates to: HCLQQNVSGKTWISQDPKQSLLT*RDPCVI
Trigger: GATCACACAGGGGTCCCTGCATGTCAGTAAACTTTG...CTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR CCA 90 bp GATTTCCCAAGACCCGAAGACTCCTCCAAGTTCTCACTGTTAGTAAGGTCAATTGCCACAAAGCATTACTaGGGCTCATTTTCCCCTAAG +
Preference number: 2 (lower is better)
Translates to: DFPRPEDSSKFSLLVRSIATKHY*GSFSPK
Trigger: CTTAGGGGAAAATGAGCCCCAGTAATGCTTTGTGGC...AATTGACCTTACTAACAGTGAGAACTTGGAGGAGTCTTCGGGTCTTGGGAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR CCA 90 bp TGTATCAAGAGGAAGGGAAGGAAGTCATATCCCAAGAGGGCACTTAACCTTAGTGCCACAAAGCATTACTaGGGCTCATTTTCCCCTAAG +
Preference number: 2 (lower is better)
Translates to: CIKRKGRKSYPKRALNLSATKHY*GSFSPK
Trigger: CTTAGGGGAAAATGAGCCCCAGTAATGCTTTGTGGC...ACTAAGGTTAAGTGCCCTCTTGGGATATGACTTCCTTCCCTTCCTCTTGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR CCA 90 bp GAAAACTTGGATTTCCCAAGACCCGAAGACTCCTCCAAGTTCTCACTGTTAGTAAAGCTTATACTCGTGTaGGGAATGCCAGTTTCTGGG +
Preference number: 2 (lower is better)
Translates to: ENLDFPRPEDSSKFSLLVKLILV*GMPVSG
Trigger: CCCAGAAACTGGCATTCCCCACACGAGTATAAGCTT...TACTAACAGTGAGAACTTGGAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394897.5
3UTR CAA 90 bp CAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTaGGATTTCCCAAGACCCGAAGACTCCTCCAAGTTCTCACTGTTA +
Preference number: 2 (lower is better)
Translates to: QRVWTLFTTKRFREN*DFPRPEDSSKFSLL
Trigger: TAACAGTGAGAACTTGGAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR TCA 90 bp GATTTCCCAAGACCCGAAGACTCCTCCAAGTTCTCACTGTTAGTAAGGTCAATTGAACTCTTGTGTGTATaGGGGTTGGTAATAGGCTCT +
Preference number: 2 (lower is better)
Translates to: DFPRPEDSSKFSLLVRSIELLCV*GLVIGS
Trigger: AGAGCCTATTACCAACCCTCATACACACAAGAGTTC...AATTGACCTTACTAACAGTGAGAACTTGGAGGAGTCTTCGGGTCTTGGGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR CCA 90 bp GCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTAGAACTAAGAGGGGCTaGGGCAGAAAGTCAAAGGGT +
Preference number: 2 (lower is better)
Translates to: AKSVDTVYNKTFPGKLGFRTKRG*GRKSKG
Trigger: ACCCTTTGACTTTCTGCCCCAGCCCCTCTTAGTTCT...AAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR TCA 90 bp ATTCAAGCCAACCTTAATCTAGCTCTGAAAAGGAGGCTGATCCTTGGTGACACTATGCCATTGAGTTGGTaGAATATCCTTTGGGTCTTG +
Preference number: 2 (lower is better)
Translates to: IQANLNLALKRRLILGDTMPLSW*NILWVL
Trigger: CAAGACCCAAAGGATATTTCACCAACTCAATGGCAT...AGTGTCACCAAGGATCAGCCTCCTTTTCAGAGCTAGATTAAGGTTGGCTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR TCA 90 bp TCTGCAACTAGGAAGGGAACTCTTGTGTGTATGAGGGTTGGTAATAGGCTCTTTATGCCATTGAGTTGGTaGAATATCCTTTGGGTCTTG +
Preference number: 2 (lower is better)
Translates to: SATRKGTLVCMRVGNRLFMPLSW*NILWVL
Trigger: CAAGACCCAAAGGATATTTCACCAACTCAATGGCAT...AAAGAGCCTATTACCAACCCTCATACACACAAGAGTTCCCTTCCTAGTTGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR TCA 90 bp AGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGAGGTCCACTGCGGAGTaGATCAGAAGTCAGAATATA +
Preference number: 2 (lower is better)
Translates to: SVDTVYNKTFPGKLGFPKRSTAE*IRSQNI
Trigger: TATATTCTGACTTCTGATTCACTCCGCAGTGGACCT...CTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR TCA 90 bp TACGTAAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCTTTACAACCCATaGCAACAGACAAGCCGACTC +
Preference number: 2 (lower is better)
Translates to: YVRTILMKWLGQKPDIGPLLYNP*QQTSRL
Trigger: GAGTCGGCTTGTCTGTTGTCATGGGTTGTAAAGCAG...TGGACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTTACGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507484.5
3UTR-3UTR GCA 90 bp GCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTGGAACATGCCTTAGCTaGTGTCAGGAAATAGAAGAG +
Preference number: 2 (lower is better)
Translates to: AKSVDTVYNKTFPGKLGFGTCLS*CQEIEE
Trigger: CTCTTCTATTTCCTGACAGCAGCTAAGGCATGTTCC...AAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR CCA 90 bp TTTATTGGAGCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAATGCTGGATCCCTAGGTaGCTTAGTTATGAAGATGGG +
Preference number: 2 (lower is better)
Translates to: FIGAKSVDTVYNKTFPGKCWIPR*LSYEDG
Trigger: CCCATCTTCATAACTAAGCCACCTAGGGATCCAGCA...TTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGCTCCAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR TCA 90 bp GGTTACGTAAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTGTGGATCCTGCTAAATaGTCCACCTCCTGTATGATG +
Preference number: 2 (lower is better)
Translates to: GYVRTILMKWLGQKPDIGVDPAK*STSCMM
Trigger: CATCATACAGGAGGTGGATCATTTAGCAGGATCCAC...ACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTTACGTAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR CCA 90 bp ATCAAGAGGAAGGGAAGGAAGTCATATCCCAAGAGGGCACTTAACCTTAGTCCTTTCTTTAGAGTAAAATaGCAGAGTTTCATGTCTAGG +
Preference number: 2 (lower is better)
Translates to: IKRKGRKSYPKRALNLSPFFRVK*QSFMSR
Trigger: CCTAGACATGAAACTCTGCCATTTTACTCTAAAGAA...AGGACTAAGGTTAAGTGCCCTCTTGGGATATGACTTCCTTCCCTTCCTCTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR TCA 90 bp AGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGGTTATGAGAGTCCTTTaGTATCATGTGAAAACCATG +
Preference number: 2 (lower is better)
Translates to: SVDTVYNKTFPGKLGFPKVMRVL*YHVKTM
Trigger: CATGGTTTTCACATGATATCAAAGGACTCTCATAAC...CTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR CCA 90 bp AAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGAGCACAGGTAGAACCTaGAGTCACTTGAATTGTATA +
Preference number: 2 (lower is better)
Translates to: KNNFDEMVRSEARYRSTASTGRT*SHLNCI
Trigger: TATACAATTCAAGTGACTCCAGGTTCTACCTGTGCT...CGCAGTGGACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507484.5
3UTR-3UTR TCA 90 bp TACGTAAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCAATGCCATTGAGTTGGTaGAATATCCTTTGGGTCTTG +
Preference number: 2 (lower is better)
Translates to: YVRTILMKWLGQKPDIGPMPLSW*NILWVL
Trigger: CAAGACCCAAAGGATATTTCACCAACTCAATGGCAT...TGGACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTTACGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
ENST00000512708.5
3UTR CCA 72 bp AGAGCAGAGTTGGGCATGGAGGCTCCAGCTCAGACTTaGGAAGATGGAGAAGAGCCATCCCAAGTCCAGAGT +
Preference number: 3 (lower is better)
Translates to: RAELGMEAPAQT*EDGEEPSQVQS
Trigger: ACTCTGGACTTGGGATGGCTCTTCTCCATCTTCCCAAGTCTGAGCTGGAGCCTCCATGCCCAACTCTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR CCA 72 bp AGGCGAGGGCAGCTGCCAGAACGTCCAGATTTCCAATaGCCTCAAAGCAGAAGTCTATACCAGCATCTGTCA +
Preference number: 3 (lower is better)
Translates to: RRGQLPERPDFQ*PQSRSLYQHLS
Trigger: TGACAGATGCTGGTATAGACTTCTGCTTTGAGGCCATTGGAAATCTGGACGTTCTGGCAGCTGCCCTCGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507484.5
3UTR-3UTR CAA 90 bp TGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTGGCTCCAGCTCAGACTaGGGAAGATGGAGAAGAGCC +
Preference number: 3 (lower is better)
Translates to: CLQQNVSGKTWISQDPKTGSSSD*GRWRRA
Trigger: GGCTCTTCTCCATCTTCCCAAGTCTGAGCTGGAGCC...AGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR CAA 90 bp AGCTCTCATTGCAGGAGGCGAGGGCAGCTGCCAGAACGTCCAGATTTCCAATGGTTCTTAAATTTCTCCTaGTTGACATCCACTCCAATG +
Preference number: 3 (lower is better)
Translates to: SSHCRRRGQLPERPDFQWFLNFS*LTSTPM
Trigger: CATTGGAGTGGATGTCAACAAGGAGAAATTTAAGAA...CCATTGGAAATCTGGACGTTCTGGCAGCTGCCCTCGCCTCCTGCAATGAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507484.5
3UTR TCA 72 bp TACAACCGCTTTGTAGGAAGTGTGGATCCTGCTAAATaGTCCACCTCCTGTATGATGACTCCCCTCATCCCT +
Preference number: 3 (lower is better)
Translates to: YNRFVGSVDPAK*STSCMMTPLIP
Trigger: AGGGATGAGGGGAGTCATCATACAGGAGGTGGATCATTTAGCAGGATCCACACTTCCTACAAAGCGGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR CCA 72 bp AACCTTAGTCCTAATTCTAGGAGAACTAAGAGGGGCTaGGGCAGAAAGTCAAAGGGTCGGGGTAGAAGGATT +
Preference number: 3 (lower is better)
Translates to: NLSPNSRRTKRG*GRKSKGRGRRI
Trigger: AATCCTTCTACCCCGACCCTTTGACTTTCTGCCCCAGCCCCTCTTAGTTCTCCTAGAATTAGGACTAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR CAA 90 bp GCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTGGCTCCAGCTCAGACTaGGGAAGATGGAGAAGAGCC +
Preference number: 3 (lower is better)
Translates to: AKSVDTVYNKTFPGKLGFGSSSD*GRWRRA
Trigger: GGCTCTTCTCCATCTTCCCAAGTCTGAGCTGGAGCC...AAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR CAA 90 bp TACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTCCTCCTGAAGGATGTGGAGTaGAGTGATTCAAGCCAACCT +
Preference number: 3 (lower is better)
Translates to: YNKTFPGKLGFPKTRRLLLKDVE*SDSSQP
Trigger: AGGTTGGCTTGAATCACTCAACTCCACATCCTTCAG...GAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR CAA 90 bp TTTATTGGAGCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAAAAGAGCAGAGCAGAGTaGGGCATGGAGGCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: FIGAKSVDTVYNKTFPGKKSRAE*GMEAPA
Trigger: AGCTGGAGCCTCCATGCCCAACTCTGCTCTGCTCTT...TTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGCTCCAATAAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR GCA 72 bp TTTGAAGGAAGCAGGCCCCTAAAGGGAAACACAGGATaGCCAACTCATAAGAATCAGACTGTTATGAGAGTC +
Preference number: 3 (lower is better)
Translates to: FEGSRPLKGNTG*PTHKNQTVMRV
Trigger: GACTCTCATAACAGTCTGATTCTTATGAGTTGGGCATCCTGTGTTTCCCTTTAGGGGCCTGCTTCCTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR CCA 72 bp GGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTaGATTTCCCAAGACCCGAAGACTCCTCCAAGTTCT +
Preference number: 3 (lower is better)
Translates to: GHCLQQNVSGKT*ISQDPKTPPSS
Trigger: AGAACTTGGAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR CAA 90 bp TTGATATCATGTGAAAACCATGATGGGAGAGAGAGACTGAGGGTGCAGCCCACCTTGGTGAAATATCCTTaGGGTCTTGCATGTATTACA +
Preference number: 3 (lower is better)
Translates to: LISCENHDGRERLRVQPTLVKYP*GLACIT
Trigger: TGTAATACATGCAAGACCCAAAGGATATTTCACCAA...GGTGGGCTGCACCCTCAGTCTCTCTCTCCCATCATGGTTTTCACATGATATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR CAA 90 bp GCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTGTCGGGGTAGAAGGATaGGATGCCACAAAGCATTAC +
Preference number: 3 (lower is better)
Translates to: AKSVDTVYNKTFPGKLGFVGVEG*DATKHY
Trigger: GTAATGCTTTGTGGCATCCAATCCTTCTACCCCGAC...AAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR CAA 90 bp TGCCAGAACGTCCAGATTTCCAATGGCCTCAAAGCAGAAGTCTATACCAGCATCCTGGAGTCACTTGAATaGTATACAAAAATTGCCCTC +
Preference number: 3 (lower is better)
Translates to: CQNVQISNGLKAEVYTSILESLE*YTKIAL
Trigger: GAGGGCAATTTTTGTATACAATTCAAGTGACTCCAG...GATGCTGGTATAGACTTCTGCTTTGAGGCCATTGGAAATCTGGACGTTCTGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507484.5
3UTR-3UTR CAA 90 bp GCTGCCAGAACGTCCAGATTTCCAATGGCCTCAAAGCAGAAGTCTATACCAGCATTAAATTTCTCCTTGTaGACATCCACTCCAATGATC +
Preference number: 3 (lower is better)
Translates to: AARTSRFPMASKQKSIPALNFSL*TSTPMI
Trigger: GATCATTGGAGTGGATGTCAACAAGGAGAAATTTAA...TGCTGGTATAGACTTCTGCTTTGAGGCCATTGGAAATCTGGACGTTCTGGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507484.5
3UTR CCA 72 bp GGCTTAAGGAACCGAGCTTTATTGGAGCAAAGAGTGTaGACACTGTTTACAACAAAACGTTTCCGGGAAAAC +
Preference number: 3 (lower is better)
Translates to: GLRNRALLEQRV*TLFTTKRFREN
Trigger: GTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGCTCCAATAAAGCTCGGTTCCTTAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR CAA 90 bp AGCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTCTGAAGGATGTGGAGTaGAGTGATTCAAGCCAACCT +
Preference number: 3 (lower is better)
Translates to: SKECGHCLQQNVSGKTWILKDVE*SDSSQP
Trigger: AGGTTGGCTTGAATCACTCAACTCCACATCCTTCAG...AATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR TCA 72 bp AAGAGTCTGCAACTAGGAAGGGAACTCTTGTGTGTATaGGGGTTGGTAATAGGCTCTTTTTGTATCAAGAGG +
Preference number: 3 (lower is better)
Translates to: KSLQLGRELLCV*GLVIGSFCIKR
Trigger: CCTCTTGATACAAAAAGAGCCTATTACCAACCCTCATACACACAAGAGTTCCCTTCCTAGTTGCAGACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR GCA 72 bp TCCACAGGTAGAGGAACTATGAAAATGGGAGCATCTTaGATTGACCTTTTATGTCTGAAGGATGTGGAGTTG +
Preference number: 3 (lower is better)
Translates to: STGRGTMKMGAS*IDLLCLKDVEL
Trigger: CAACTCCACATCCTTCAGACATAAAAGGTCAATGCAAGATGCTCCCATTTTCATAGTTCCTCTACCTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR CAA 90 bp TTACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTCCTATGATATTCCATTTTTaGGTCTCCCAAGGTCATCCA +
Preference number: 3 (lower is better)
Translates to: LQQNVSGKTWISQDPKTPMIFHF*VSQGHP
Trigger: TGGATGACCTTGGGAGACCAAAAAATGGAATATCAT...AGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR CAA 90 bp TTTGGGTCTTGCATGTATTACATTGTACTTAAAGTAACAGGATACAGCGGATACGCCACTGATTTTGAGTaGAACACTGGCAGGCAACAC +
Preference number: 3 (lower is better)
Translates to: FGSCMYYIVLKVTGYSGYATDFE*NTGRQH
Trigger: GTGTTGCCTGCCAGTGTTCAACTCAAAATCAGTGGC...GTATCCGCTGTATCCTGTTACTTTAAGTACAATGTAATACATGCAAGACCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507484.5
3UTR TCA 72 bp AAAATGCAGAGGGGAAGGAGATGCTTTACAAATTCCTaGAAGCCTCTTCAATTATCAGTATACAGCTTCTGC +
Preference number: 3 (lower is better)
Translates to: KMQRGRRCFTNS*KPLQLSVYSFC
Trigger: GCAGAAGCTGTATACTGATAATTGAAGAGGCTTTCAGGAATTTGTAAAGCATCTCCTTCCCCTCTGCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
3UTR CCA 72 bp CTCATTAATGCGGAGTTTTGTTTCTTTAGAGTAAAATaGCAGAGTTTCATGTCTAGGCCTGTGAGAGAGACA +
Preference number: 3 (lower is better)
Translates to: LINAEFCFFRVK*QSFMSRPVRET
Trigger: TGTCTCTCTCACAGGCCTAGACATGAAACTCTGCCATTTTACTCTAAAGAAACAAAACTCCGCATTAATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR-3UTR CAA 90 bp AAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGTTGGTGAAATATCCTTaGGGTCTTGCATGTATTACA +
Preference number: 3 (lower is better)
Translates to: KNNFDEMVRSEARYRSTALVKYP*GLACIT
Trigger: TGTAATACATGCAAGACCCAAAGGATATTTCACCAA...CGCAGTGGACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
ENST00000512708.5
3UTR-3UTR CAA 90 bp GGTTACGTAAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTTCAAATGCCATTGAGTaGGTGAAATATCCTTTGGGT +
Preference number: 3 (lower is better)
Translates to: GYVRTILMKWLGQKPDIGSNAIE*VKYPLG
Trigger: ACCCAAAGGATATTTCACCAACTCAATGGCATTTGA...ACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTTACGTAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
ENST00000512708.5
3UTR-3UTR CAA 90 bp TTTGGGTCTTGCATGTATTACATTGTACTTAAAGTAACAGGATACAGCGGATACTTGGTGAAATATCCTTaGGGTCTTGCATGTATTACA +
Preference number: 3 (lower is better)
Translates to: FGSCMYYIVLKVTGYSGYLVKYP*GLACIT
Trigger: TGTAATACATGCAAGACCCAAAGGATATTTCACCAA...GTATCCGCTGTATCCTGTTACTTTAAGTACAATGTAATACATGCAAGACCCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394897.5
ENST00000507484.5
ENST00000512708.5
3UTR-3UTR CAA 90 bp CTGGGTTACGTAAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATATTGGTGAAATATCCTTaGGGTCTTGCATGTATTACA +
Preference number: 3 (lower is better)
Translates to: LGYVRTILMKWLGQKPDILVKYP*GLACIT
Trigger: TGTAATACATGCAAGACCCAAAGGATATTTCACCAA...TATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTTACGTAACCCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
ENST00000512708.5
CDS-3UTR GCA 90 bp CACTGGCAGGCAACACCCCAACAACCACACAGACCCCATAGCTCTCATTGCAGGCCCCATAGCTCTCATTaGAGGAGGCGAGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HWQATPQQPHRPHSSHCRPHSSH*RRRGQL
Trigger: CAGCTGCCCTCGCCTCCTGCAATGAGAGCTATGGGG...CCTGCAATGAGAGCTATGGGGTCTGTGTGGTTGTTGGGGTGTTGCCTGCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507484.5
3UTR CAA 72 bp CAGAGCAGAGTTGGGCATGGAGGCTCCAGCTCAGACTaGGGAAGATGGAGAAGAGCCATCCCAAGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: QSRVGHGGSSSD*GRWRRAIPSPE
Trigger: CTCTGGACTTGGGATGGCTCTTCTCCATCTTCCCAAGTCTGAGCTGGAGCCTCCATGCCCAACTCTGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp GTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACACCCCCATAGCTCTCATTaGAGGAGGCGAGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VYSFCSRDDPSSTPKPIHPHSSH*RRRGQL
Trigger: CAGCTGCCCTCGCCTCCTGCAATGAGAGCTATGGGG...GTGTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000237653.11
CDS-3UTR TCA 90 bp GCAGAAAGTCAAAGGGTCGGGGTAGAAGGATTGGATGCCACAAAGCATTACTGGGCAGGGACCCCTGTGTaGTCTAGTGGGAGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: AESQRVGVEGLDATKHYWAGTPV*SSGSPE
Trigger: CTCTGGACTCCCACTAGATCACACAGGGGTCCCTGC...CCAGTAATGCTTTGTGGCATCCAATCCTTCTACCCCGACCCTTTGACTTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp AGCTCTCATTGCAGGAGGCGAGGGCAGCTGCCAGAACGTCCAGATTTCCAATGGAACTTCCTTTGCCTTTaGTGGGGCCACTTCTACCTC +
Preference number: 4 (lower is better)
Translates to: SSHCRRRGQLPERPDFQWNFLCL*WGHFYL
Trigger: GAGGTAGAAGTGGCCCCACCAAAGGCAAAGGAAGTT...CCATTGGAAATCTGGACGTTCTGGCAGCTGCCCTCGCCTCCTGCAATGAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507484.5
CDS-3UTR CCA 90 bp CATGGAGGCTCCAGCTCAGACTTGGGAAGATGGAGAAGAGCCATCCCAAGTCCAATTCCAGCCCCTTCATaGCCCAAGATGGTGGGATAC +
Preference number: 4 (lower is better)
Translates to: HGGSSSDLGRWRRAIPSPIPAPS*PKMVGY
Trigger: GTATCCCACCATCTTGGGCCATGAAGGGGCTGGAAT...TGGACTTGGGATGGCTCTTCTCCATCTTCCCAAGTCTGAGCTGGAGCCTCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp TGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAGTCAGACCCCATAGCTCTCATTaGAGGAGGCGAGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: WLGQKPDIGPLRSESEVRPHSSH*RRRGQL
Trigger: CAGCTGCCCTCGCCTCCTGCAATGAGAGCTATGGGG...TCTGACTTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394899.6
ENST00000507484.5
CDS-3UTR GCA 90 bp GAGCAGAGCAGAGTTGGGCATGGAGGCTCCAGCTCAGACTTGGGAAGATGGAGACAAAGTTTACTGACATaGAGGGACCCCTGTGTGATC +
Preference number: 4 (lower is better)
Translates to: EQSRVGHGGSSSDLGRWRQSLLT*RDPCVI
Trigger: GATCACACAGGGGTCCCTGCATGTCAGTAAACTTTG...TCTCCATCTTCCCAAGTCTGAGCTGGAGCCTCCATGCCCAACTCTGCTCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp CATGGAGGCTCCAGCTCAGACTTGGGAAGATGGAGAAGAGCCATCCCAAGTCCAGGCAGAACAGGAACATaGCTTAGCTGCTGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: HGGSSSDLGRWRRAIPSPGRTGT*LSCCQE
Trigger: TTCCTGACAGCAGCTAAGGCATGTTCCTGTTCTGCC...TGGACTTGGGATGGCTCTTCTCCATCTTCCCAAGTCTGAGCTGGAGCCTCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp GCGAGGGCAGCTGCCAGAACGTCCAGATTTCCAATGGCCTCAAAGCAGAAGTCTTTCCTTTGCCTTTGGTaGGGCCACTTCTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: ARAAARTSRFPMASKQKSFLCLW*GHFYLF
Trigger: GAAGAGGTAGAAGTGGCCCCACCAAAGGCAAAGGAA...AGACTTCTGCTTTGAGGCCATTGGAAATCTGGACGTTCTGGCAGCTGCCCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507484.5
CDS-3UTR TCA 90 bp CAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACGGCTCTCCCGCTGCTTaGTGGAAGTTCCTAAGTGTA +
Preference number: 4 (lower is better)
Translates to: QYTASAAGTTLLLLPSQYGSPAA*WKFLSV
Trigger: TACACTTAGGAACTTCCATCAAGCAGCGGGAGAGCC...GTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237653.11
CDS-3UTR TCA 90 bp GGATTTCCCAAGACCCGAAGACTCCTCCAAGTTCTCACTGTTAGTAAGGTCAATGCAGGGACCCCTGTGTaGTCTAGTGGGAGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: GFPKTRRLLQVLTVSKVNAGTPV*SSGSPE
Trigger: CTCTGGACTCCCACTAGATCACACAGGGGTCCCTGC...ATTGACCTTACTAACAGTGAGAACTTGGAGGAGTCTTCGGGTCTTGGGAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp CTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACACCCTTTCTCAGTAGGCTCTCCCGCTaGTTGATGGAAGTTCCTAAG +
Preference number: 4 (lower is better)
Translates to: LLQQGRPFFYSQANTPFLSRLSR*LMEVPK
Trigger: CTTAGGAACTTCCATCAAGCAGCGGGAGAGCCTACT...GAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237653.11
CDS-3UTR GCA 90 bp CACTGGCAGGCAACACCCCAACAACCACACAGACCCCATAGCTCTCATTGCAGGCTTCCAGAGTATGGCTaGTTTGCATCTGATGACTTG +
Preference number: 4 (lower is better)
Translates to: HWQATPQQPHRPHSSHCRLPEYG*FASDDL
Trigger: CAAGTCATCAGATGCAAAGCAGCCATACTCTGGAAG...CCTGCAATGAGAGCTATGGGGTCTGTGTGGTTGTTGGGGTGTTGCCTGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507484.5
CDS-3UTR CCA 90 bp CTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTTGCTTCATGGCCCAAGATaGTGGGATACAAGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LQQGRPFFYSQANTPFLLLHGPR*WDTRGP
Trigger: TGGACCTCTTGTATCCCACCATCTTGGGCCATGAAG...CAAGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR TCA 90 bp CCATCTCCTCTATTTGAAGGAAGCAGGCCCCTAAAGGGAAACACAGGATGCCCATCACCTTGGCAGTATTaGTTGCAGCACCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: PSPLFEGSRPLKGNTGCPSPWQY*LQHQTQ
Trigger: CTGGGTTTGGTGCTGCAATCAATACTGCCAAGGTGA...TGGGCATCCTGTGTTTCCCTTTAGGGGCCTGCTTCCTTCAAATAGAGGAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp CAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTTGGTCCTTCAAAGAACGTCCTaGGAAGAACAACTGGCCACT +
Preference number: 4 (lower is better)
Translates to: QQGRPFFYSQANTPFLLVLQRTS*EEQLAT
Trigger: AGTGGCCAGTTGTTCTTCTCAGGACGTTCTTTGAAG...GACCAAGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237653.11
CDS-3UTR TCA 90 bp TTGGGCATGGAGGCTCCAGCTCAGACTTGGGAAGATGGAGAAGAGCCATCCCAATCATGTCTAGGCCTGTaGGAGAGACATATAGTGTAC +
Preference number: 4 (lower is better)
Translates to: LGMEAPAQTWEDGEEPSQSCLGL*ERHIVY
Trigger: GTACACTATATGTCTCTCTCACAGGCCTAGACATGA...TTGGGATGGCTCTTCTCCATCTTCCCAAGTCTGAGCTGGAGCCTCCATGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp CCATCTCCTCTATTTGAAGGAAGCAGGCCCCTAAAGGGAAACACAGGATGCCCACCCATCTCCTCTATTTaGAGGAAGCAGGCCCCTAAA +
Preference number: 4 (lower is better)
Translates to: PSPLFEGSRPLKGNTGCPPISSI*RKQAPK
Trigger: TTTAGGGGCCTGCTTCCTTCAAATAGAGGAGATGGG...TGGGCATCCTGTGTTTCCCTTTAGGGGCCTGCTTCCTTCAAATAGAGGAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp CCATCTCCTCTATTTGAAGGAAGCAGGCCCCTAAAGGGAAACACAGGATGCCCAACCAGTTTAGGGATGTaGTGTCTGCTCTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PSPLFEGSRPLKGNTGCPTSLGM*CLLFQP
Trigger: AGGCTGGAAGAGCAGACAGCACATCCCTAAACTGGT...TGGGCATCCTGTGTTTCCCTTTAGGGGCCTGCTTCCTTCAAATAGAGGAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394899.6
CDS-3UTR CCA 90 bp TTGGGCATGGAGGCTCCAGCTCAGACTTGGGAAGATGGAGAAGAGCCATCCCAACTCTTCAATAGAAAATaGTGCACCAGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LGMEAPAQTWEDGEEPSQLFNRK*CTRLPE
Trigger: CTCTGGAAGCCTGGTGCACCATTTTCTATTGAAGAG...TTGGGATGGCTCTTCTCCATCTTCCCAAGTCTGAGCTGGAGCCTCCATGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp TTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTTACCACACAGTCCGGTaGCCACAACCTTTATGCGAA +
Preference number: 4 (lower is better)
Translates to: FCSRDDPSSTPKPIHPFSYHTVR*PQPLCE
Trigger: TTCGCATAAAGGTTGTGGCCACCGGACTGTGTGGTA...AGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR TCA 90 bp TATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATCACCTTGGCAGTATTaGTTGCAGCACCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: YQYTASAAGTTLLLLPSQSPWQY*LQHQTQ
Trigger: CTGGGTTTGGTGCTGCAATCAATACTGCCAAGGTGA...TTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR TCA 90 bp ATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATCTGCTTTACAACCCATaGCAACAGACAAGCCGACTC +
Preference number: 4 (lower is better)
Translates to: ISIQLLQQGRPFFYSQANLLYNP*QQTSRL
Trigger: GAGTCGGCTTGTCTGTTGTCATGGGTTGTAAAGCAG...ATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR TCA 90 bp GCAGAAAGTCAAAGGGTCGGGGTAGAAGGATTGGATGCCACAAAGCATTACTGGCTGCTTTACAACCCATaGCAACAGACAAGCCGACTC +
Preference number: 4 (lower is better)
Translates to: AESQRVGVEGLDATKHYWLLYNP*QQTSRL
Trigger: GAGTCGGCTTGTCTGTTGTCATGGGTTGTAAAGCAG...CCAGTAATGCTTTGTGGCATCCAATCCTTCTACCCCGACCCTTTGACTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp TATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACACCGGTTTCTTTAAGTCCTaGGGGTTGAGGCACTCAGTA +
Preference number: 4 (lower is better)
Translates to: YTASAAGTTLLLLPSQYTGFFKS*GLRHSV
Trigger: TACTGAGTGCCTCAACCCTCAGGACTTAAAGAAACC...GGTGTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR TCA 90 bp TTGATATCATGTGAAAACCATGATGGGAGAGAGAGACTGAGGGTGCAGCCCACCCCCATCTCCTCTATTTaGAGGAAGCAGGCCCCTAAA +
Preference number: 4 (lower is better)
Translates to: LISCENHDGRERLRVQPTPISSI*RKQAPK
Trigger: TTTAGGGGCCTGCTTCCTTCAAATAGAGGAGATGGG...GGTGGGCTGCACCCTCAGTCTCTCTCTCCCATCATGGTTTTCACATGATATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp AGCTCTCATTGCAGGAGGCGAGGGCAGCTGCCAGAACGTCCAGATTTCCAATGGTTCAATAGAAAATGGTaGACCAGGCTTCCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: SSHCRRRGQLPERPDFQWFNRKW*TRLPEY
Trigger: ATACTCTGGAAGCCTGGTGCACCATTTTCTATTGAA...CCATTGGAAATCTGGACGTTCTGGCAGCTGCCCTCGCCTCCTGCAATGAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507484.5
CDS-3UTR GCA 90 bp TATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAAACCAGTTTAGGGATGTaGTGTCTGCTCTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: YQYTASAAGTTLLLLPSQTSLGM*CLLFQP
Trigger: AGGCTGGAAGAGCAGACAGCACATCCCTAAACTGGT...TTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237653.11
CDS-3UTR CCA 90 bp CGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTCCTCCAAGTTCTCATTCCTTTGCCTTTGGTaGGGCCACTTCTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: RFRENLDFPRPEDSSKFSFLCLW*GHFYLF
Trigger: GAAGAGGTAGAAGTGGCCCCACCAAAGGCAAAGGAA...TGAGAACTTGGAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp ATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATAACTTCCTTTGCCTTTaGTGGGGCCACTTCTACCTC +
Preference number: 4 (lower is better)
Translates to: ISIQLLQQGRPFFYSQANNFLCL*WGHFYL
Trigger: GAGGTAGAAGTGGCCCCACCAAAGGCAAAGGAAGTT...ATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CCA 90 bp GGAAGCAGGCCCCTAAAGGGAAACACAGGATGCCCAACTCATAAGAATCAGACTAACTTCCTTTGCCTTTaGTGGGGCCACTTCTACCTC +
Preference number: 4 (lower is better)
Translates to: GSRPLKGNTGCPTHKNQTNFLCL*WGHFYL
Trigger: GAGGTAGAAGTGGCCCCACCAAAGGCAAAGGAAGTT...AGTCTGATTCTTATGAGTTGGGCATCCTGTGTTTCCCTTTAGGGGCCTGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp TATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAACATGGCCCAAGATGGTaGGATACAAGAGGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: YQYTASAAGTTLLLLPSQHGPRW*DTRGPS
Trigger: ACTTGGACCTCTTGTATCCCACCATCTTGGGCCATG...TTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CCA 90 bp GCAGAAAGTCAAAGGGTCGGGGTAGAAGGATTGGATGCCACAAAGCATTACTGGCATGGCCCAAGATGGTaGGATACAAGAGGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: AESQRVGVEGLDATKHYWHGPRW*DTRGPS
Trigger: ACTTGGACCTCTTGTATCCCACCATCTTGGGCCATG...CCAGTAATGCTTTGTGGCATCCAATCCTTCTACCCCGACCCTTTGACTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp GCAGAAAGTCAAAGGGTCGGGGTAGAAGGATTGGATGCCACAAAGCATTACTGGCTTCATGGCCCAAGATaGTGGGATACAAGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: AESQRVGVEGLDATKHYWLHGPR*WDTRGP
Trigger: TGGACCTCTTGTATCCCACCATCTTGGGCCATGAAG...CCAGTAATGCTTTGTGGCATCCAATCCTTCTACCCCGACCCTTTGACTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp CATGGAGGCTCCAGCTCAGACTTGGGAAGATGGAGAAGAGCCATCCCAAGTCCAACATTCTCCACACTGTaGCAGAAAGAGTGTGATAAC +
Preference number: 4 (lower is better)
Translates to: HGGSSSDLGRWRRAIPSPTFSTL*QKECDN
Trigger: GTTATCACACTCTTTCTGCCACAGTGTGGAGAATGT...TGGACTTGGGATGGCTCTTCTCCATCTTCCCAAGTCTGAGCTGGAGCCTCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp CCATCTCCTCTATTTGAAGGAAGCAGGCCCCTAAAGGGAAACACAGGATGCCCATGCTGGATCCCTAGGTaGCTTAGTTATGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: PSPLFEGSRPLKGNTGCPCWIPR*LSYEDG
Trigger: CCCATCTTCATAACTAAGCCACCTAGGGATCCAGCA...TGGGCATCCTGTGTTTCCCTTTAGGGGCCTGCTTCCTTCAAATAGAGGAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp GGAAGCAGGCCCCTAAAGGGAAACACAGGATGCCCAACTCATAAGAATCAGACTTGCAGCCCACCTTCCTaGCCAGTGTTAAATCAGGAA +
Preference number: 4 (lower is better)
Translates to: GSRPLKGNTGCPTHKNQTCSPPS*PVLNQE
Trigger: TTCCTGATTTAACACTGGCCAGGAAGGTGGGCTGCA...AGTCTGATTCTTATGAGTTGGGCATCCTGTGTTTCCCTTTAGGGGCCTGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp TGCCAGAACGTCCAGATTTCCAATGGCCTCAAAGCAGAAGTCTATACCAGCATCCTGCTTTACAACCCATaGCAACAGACAAGCCGACTC +
Preference number: 4 (lower is better)
Translates to: CQNVQISNGLKAEVYTSILLYNP*QQTSRL
Trigger: GAGTCGGCTTGTCTGTTGTCATGGGTTGTAAAGCAG...GATGCTGGTATAGACTTCTGCTTTGAGGCCATTGGAAATCTGGACGTTCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507484.5
CDS-3UTR TCA 90 bp TGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAGTCAGACCACTGATTTTGAGTTaGACACTGGCAGGCAACACC +
Preference number: 4 (lower is better)
Translates to: WLGQKPDIGPLRSESEVRPLILS*TLAGNT
Trigger: GGTGTTGCCTGCCAGTGTTCAACTCAAAATCAGTGG...TCTGACTTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394899.6
ENST00000507484.5
CDS-3UTR TCA 90 bp CGAGGGCAGCTGCCAGAACGTCCAGATTTCCAATGGCCTCAAAGCAGAAGTCTAATGCCATTGAGTTGGTaGAATATCCTTTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: RGQLPERPDFQWPQSRSLMPLSW*NILWVL
Trigger: CAAGACCCAAAGGATATTTCACCAACTCAATGGCAT...TAGACTTCTGCTTTGAGGCCATTGGAAATCTGGACGTTCTGGCAGCTGCCCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507484.5
CDS-3UTR TCA 90 bp TATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACACCTCATGTCTAGGCCTGTaGGAGAGACATATAGTGTAC +
Preference number: 4 (lower is better)
Translates to: YTASAAGTTLLLLPSQYTSCLGL*ERHIVY
Trigger: GTACACTATATGTCTCTCTCACAGGCCTAGACATGA...GGTGTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394897.5
CDS-3UTR GCA 90 bp TGCCAGAACGTCCAGATTTCCAATGGCCTCAAAGCAGAAGTCTATACCAGCATCACCAGTTTAGGGATGTaGTGTCTGCTCTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: CQNVQISNGLKAEVYTSITSLGM*CLLFQP
Trigger: AGGCTGGAAGAGCAGACAGCACATCCCTAAACTGGT...GATGCTGGTATAGACTTCTGCTTTGAGGCCATTGGAAATCTGGACGTTCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507484.5
CDS-3UTR GCA 90 bp CGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTCCTCCAAGTTCTCAGGTAGAAGGATTGGATaGCACAAAGCATTACTGGGG +
Preference number: 4 (lower is better)
Translates to: RFRENLDFPRPEDSSKFSGRRIG*HKALLG
Trigger: CCCCAGTAATGCTTTGTGGCATCCAATCCTTCTACC...TGAGAACTTGGAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp CAATTATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGGGTAGATCAGAAGGCTaGGTCCTGAGCTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: QLSVYSFCSRDDPSSTPKGRSEG*VLSFLC
Trigger: ACAGAGAAAGCTCAGGACCCAGCCTTCTGATCTACC...CTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237653.11
CDS-3UTR CCA 90 bp TTCAATTATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAATTCCAGCCCCTTCATaGCCCAAGATGGTGGGATAC +
Preference number: 4 (lower is better)
Translates to: FNYQYTASAAGTTLLLLPIPAPS*PKMVGY
Trigger: GTATCCCACCATCTTGGGCCATGAAGGGGCTGGAAT...TGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATAATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CCA 90 bp TTGATATCATGTGAAAACCATGATGGGAGAGAGAGACTGAGGGTGCAGCCCACCAGCACAGGTAGAACCTaGAGTCACCTTGGCAGTATT +
Preference number: 4 (lower is better)
Translates to: LISCENHDGRERLRVQPTSTGRT*SHLGSI
Trigger: AATACTGCCAAGGTGACTCCAGGTTCTACCTGTGCT...GGTGGGCTGCACCCTCAGTCTCTCTCTCCCATCATGGTTTTCACATGATATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp TGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAGTCAGATGCAGCCCACCTTCCTaGCCAGTGTTAAATCAGGAA +
Preference number: 4 (lower is better)
Translates to: WLGQKPDIGPLRSESEVRCSPPS*PVLNQE
Trigger: TTCCTGATTTAACACTGGCCAGGAAGGTGGGCTGCA...TCTGACTTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp GCAGAAAGTCAAAGGGTCGGGGTAGAAGGATTGGATGCCACAAAGCATTACTGGAAGCTTATACTCGTGTaGGGAATGCCAGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: AESQRVGVEGLDATKHYWKLILV*GMPVSG
Trigger: CCCAGAAACTGGCATTCCCCACACGAGTATAAGCTT...CCAGTAATGCTTTGTGGCATCCAATCCTTCTACCCCGACCCTTTGACTTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394897.5
3UTR CAA 72 bp AGACTCCTCCAAGTTCTCACTGTTAGTAAGGTCAATTaGGGGGCAGAACAGGAACATGCCTTAGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: RLLQVLTVSKVN*GAEQEHALAAV
Trigger: GACAGCAGCTAAGGCATGTTCCTGTTCTGCCCCCAAATTGACCTTACTAACAGTGAGAACTTGGAGGAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp CAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTTGGTCTTCCTAAGTGTAATCTaGAATAGGCTCATCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QQGRPFFYSQANTPFLLVFLSVI*NRLISV
Trigger: CACTGAGATGAGCCTATTTCAGATTACACTTAGGAA...GACCAAGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237653.11
CDS-3UTR TCA 90 bp CGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTCCTCCAAGTTCTCAGGATGTGGAGTTGAGTaGTTCAAGCCAACCTTAATC +
Preference number: 4 (lower is better)
Translates to: RFRENLDFPRPEDSSKFSGCGVE*FKPTLI
Trigger: GATTAAGGTTGGCTTGAATCACTCAACTCCACATCC...TGAGAACTTGGAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp GCAGAAAGTCAAAGGGTCGGGGTAGAAGGATTGGATGCCACAAAGCATTACTGGGAACTCTTGTGTGTATaGGGGTTGGTAATAGGCTCT +
Preference number: 4 (lower is better)
Translates to: AESQRVGVEGLDATKHYWELLCV*GLVIGS
Trigger: AGAGCCTATTACCAACCCTCATACACACAAGAGTTC...CCAGTAATGCTTTGTGGCATCCAATCCTTCTACCCCGACCCTTTGACTTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp TTGATATCATGTGAAAACCATGATGGGAGAGAGAGACTGAGGGTGCAGCCCACCGAACTCTTGTGTGTATaGGGGTTGGTAATAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LISCENHDGRERLRVQPTELLCV*GLVIGS
Trigger: AGAGCCTATTACCAACCCTCATACACACAAGAGTTC...GGTGGGCTGCACCCTCAGTCTCTCTCTCCCATCATGGTTTTCACATGATATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp CTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTTGGTCTCAAACACACAGACTCAGTATACAGCTTCTaGAGCAGGGACGACCCTTCT +
Preference number: 4 (lower is better)
Translates to: LLLLPSQYTLSLGLKHTDSVYSF*SRDDPS
Trigger: AGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGA...GTCTGTGTGTTTGAGACCAAGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR GCA 90 bp TTATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAGGAACATGCCTTAGCTaGTGTCAGGAAATAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LSVYSFCSRDDPSSTPKPGTCLS*CQEIEE
Trigger: CTCTTCTATTTCCTGACAGCAGCTAAGGCATGTTCC...TGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394897.5
CDS-3UTR GCA 90 bp CCTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTTGGTCTCAAACACACAGAACCAGTTTAGGGATGTaGTGTCTGCTCTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PSSTPKPIHPFSWSQTHRTSLGM*CLLFQP
Trigger: TGGCTGGAAGAGCAGACAGCACATCCCTAAACTGGT...TCTGTGTGTTTGAGACCAAGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394897.5
CDS-3UTR CCA 90 bp GCAGAAAGTCAAAGGGTCGGGGTAGAAGGATTGGATGCCACAAAGCATTACTGGTTGCATCTGATGACTTaGCCTGTAGTACTCATGCTG +
Preference number: 4 (lower is better)
Translates to: AESQRVGVEGLDATKHYWLHLMT*PVVLML
Trigger: CAGCATGAGTACTACAGGCCAAGTCATCAGATGCAA...CCAGTAATGCTTTGTGGCATCCAATCCTTCTACCCCGACCCTTTGACTTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp CCTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTTGGTCTCAAACACACAGATTCCTTTGCCTTTGGTaGGGCCACTTCTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: PSSTPKPIHPFSWSQTHRFLCLW*GHFYLF
Trigger: GAAGAGGTAGAAGTGGCCCCACCAAAGGCAAAGGAA...TCTGTGTGTTTGAGACCAAGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CCA 90 bp ATCAAGAGGAAGGGAAGGAAGTCATATCCCAAGAGGGCACTTAACCTTAGTCCTCATGGCCCAAGATGGTaGGATACAAGAGGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: IKRKGRKSYPKRALNLSPHGPRW*DTRGPS
Trigger: ACTTGGACCTCTTGTATCCCACCATCTTGGGCCATG...AGGACTAAGGTTAAGTGCCCTCTTGGGATATGACTTCCTTCCCTTCCTCTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp TCAATTATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAACTTCATGGCCCAAGATaGTGGGATACAAGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SIISIQLLQQGRPFFYSQLHGPR*WDTRGP
Trigger: TGGACCTCTTGTATCCCACCATCTTGGGCCATGAAG...TTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATAATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CCA 90 bp TTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTACATTCTCCACACTGTaGCAGAAAGAGTGTGATAAC +
Preference number: 4 (lower is better)
Translates to: FCSRDDPSSTPKPIHPFSTFSTL*QKECDN
Trigger: GTTATCACACTCTTTCTGCCACAGTGTGGAGAATGT...AGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CCA 90 bp TTGGGCATGGAGGCTCCAGCTCAGACTTGGGAAGATGGAGAAGAGCCATCCCAACCATCAGACATCAGTTaGGTTTTTGACTGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: LGMEAPAQTWEDGEEPSQPSDIS*VFDCLN
Trigger: ATTCAAACAGTCAAAAACCCAACTGATGTCTGATGG...TTGGGATGGCTCTTCTCCATCTTCCCAAGTCTGAGCTGGAGCCTCCATGCCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp CAATTATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGAGCACAGGTAGAACCTaGAGTCACCTTGGCAGTATT +
Preference number: 4 (lower is better)
Translates to: QLSVYSFCSRDDPSSTPKSTGRT*SHLGSI
Trigger: AATACTGCCAAGGTGACTCCAGGTTCTACCTGTGCT...CTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CCA 90 bp GAGCAGAGCAGAGTTGGGCATGGAGGCTCCAGCTCAGACTTGGGAAGATGGAGATTCTTTAGAGTAAAATaGCAGAGTTTCATGTCTAGG +
Preference number: 4 (lower is better)
Translates to: EQSRVGHGGSSSDLGRWRFFRVK*QSFMSR
Trigger: CCTAGACATGAAACTCTGCCATTTTACTCTAAAGAA...TCTCCATCTTCCCAAGTCTGAGCTGGAGCCTCCATGCCCAACTCTGCTCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp CTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACACCCTTTCTCATCAATCTTGGCAACTaGGATTTCCTTTATCACTGT +
Preference number: 4 (lower is better)
Translates to: LLQQGRPFFYSQANTPFLINLGN*DFLYHC
Trigger: ACAGTGATAAAGGAAATCTCAGTTGCCAAGATTGAT...GAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR TCA 90 bp ATCAAGAGGAAGGGAAGGAAGTCATATCCCAAGAGGGCACTTAACCTTAGTCCTGGTTTCTTTAAGTCCTaGGGGTTGAGGCACTCAGTA +
Preference number: 4 (lower is better)
Translates to: IKRKGRKSYPKRALNLSPGFFKS*GLRHSV
Trigger: TACTGAGTGCCTCAACCCTCAGGACTTAAAGAAACC...AGGACTAAGGTTAAGTGCCCTCTTGGGATATGACTTCCTTCCCTTCCTCTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp TCCTCCAAGTTCTCACTGTTAGTAAGGTCAATTTGGGGGCAGAACAGGAACATGGGTTTCTTTAAGTCCTaGGGGTTGAGGCACTCAGTA +
Preference number: 4 (lower is better)
Translates to: SSKFSLLVRSIWGQNRNMGFFKS*GLRHSV
Trigger: TACTGAGTGCCTCAACCCTCAGGACTTAAAGAAACC...CATGTTCCTGTTCTGCCCCCAAATTGACCTTACTAACAGTGAGAACTTGGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp AAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAGTCGGTTTCTTTAAGTCCTaGGGGTTGAGGCACTCAGTA +
Preference number: 4 (lower is better)
Translates to: KWLGQKPDIGPLRSESEVGFFKS*GLRHSV
Trigger: TACTGAGTGCCTCAACCCTCAGGACTTAAAGAAACC...GACTTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
ENST00000512708.5
CDS-3UTR TCA 90 bp TACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTCCTCCTTCAAAGAACGTCCTaGGAAGAACAACTGGCCACT +
Preference number: 4 (lower is better)
Translates to: YNKTFPGKLGFPKTRRLLLQRTS*EEQLAT
Trigger: AGTGGCCAGTTGTTCTTCTCAGGACGTTCTTTGAAG...GAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394899.6
CDS-3UTR GCA 90 bp CTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTTGGTCTCAAACACACAGACCTTGGCAGTATTGATTaGAGCACCAAACCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LLLLPSQYTLSLGLKHTDLGSID*STKPSG
Trigger: TCCACTGGGTTTGGTGCTGCAATCAATACTGCCAAG...GTCTGTGTGTTTGAGACCAAGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR GCA 90 bp TTTTCTGCTGGATCCCTAGGTGGCTTAGTTATGAAGATGGGTACTATGAACTGCTCAGTATACAGCTTCTaGAGCAGGGACGACCCTTCT +
Preference number: 4 (lower is better)
Translates to: FSAGSLGGLVMKMGTMNCSVYSF*SRDDPS
Trigger: AGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGA...GCAGTTCATAGTACCCATCTTCATAACTAAGCCACCTAGGGATCCAGCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394897.5
CDS-3UTR GCA 90 bp TGTATCAAGAGGAAGGGAAGGAAGTCATATCCCAAGAGGGCACTTAACCTTAGTGGCAGAACAGGAACATaGCTTAGCTGCTGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: CIKRKGRKSYPKRALNLSGRTGT*LSCCQE
Trigger: TTCCTGACAGCAGCTAAGGCATGTTCCTGTTCTGCC...ACTAAGGTTAAGTGCCCTCTTGGGATATGACTTCCTTCCCTTCCTCTTGATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp ATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAACCAGTTTAGGGATGTaGTGTCTGCTCTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: MKWLGQKPDIGPLRSESETSLGM*CLLFQP
Trigger: TGGCTGGAAGAGCAGACAGCACATCCCTAAACTGGT...TTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCATTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000512708.5
CDS-3UTR CCA 90 bp GAAAACTTGGATTTCCCAAGACCCGAAGACTCCTCCAAGTTCTCACTGTTAGTATTCCTTTGCCTTTGGTaGGGCCACTTCTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: ENLDFPRPEDSSKFSLLVFLCLW*GHFYLF
Trigger: GAAGAGGTAGAAGTGGCCCCACCAAAGGCAAAGGAA...TACTAACAGTGAGAACTTGGAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp AGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACAGATAACTTTGTCACCTaGTTTCACTGTGCTTACTCC +
Preference number: 4 (lower is better)
Translates to: SIQLLQQGRPFFYSQANTDNFVT*FHCAYS
Trigger: GGAGTAAGCACAGTGAAACCAGGTGACAAAGTTATC...TGTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CCA 90 bp GGAAGCAGGCCCCTAAAGGGAAACACAGGATGCCCAACTCATAAGAATCAGACTGATAACTTTGTCACCTaGTTTCACTGTGCTTACTCC +
Preference number: 4 (lower is better)
Translates to: GSRPLKGNTGCPTHKNQTDNFVT*FHCAYS
Trigger: GGAGTAAGCACAGTGAAACCAGGTGACAAAGTTATC...AGTCTGATTCTTATGAGTTGGGCATCCTGTGTTTCCCTTTAGGGGCCTGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp GAAAACTTGGATTTCCCAAGACCCGAAGACTCCTCCAAGTTCTCACTGTTAGTAAGAACTAAGAGGGGCTaGGGCAGAAAGTCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: ENLDFPRPEDSSKFSLLVRTKRG*GRKSKG
Trigger: ACCCTTTGACTTTCTGCCCCAGCCCCTCTTAGTTCT...TACTAACAGTGAGAACTTGGAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp GGAAGCAGGCCCCTAAAGGGAAACACAGGATGCCCAACTCATAAGAATCAGACTTTAGTAAGGTCAATTTaGGGGCAGAACAGGAACATG +
Preference number: 4 (lower is better)
Translates to: GSRPLKGNTGCPTHKNQTLVRSI*GQNRNM
Trigger: CATGTTCCTGTTCTGCCCCCAAATTGACCTTACTAA...AGTCTGATTCTTATGAGTTGGGCATCCTGTGTTTCCCTTTAGGGGCCTGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp TTGGGCATGGAGGCTCCAGCTCAGACTTGGGAAGATGGAGAAGAGCCATCCCAACAACAAATACAACAATaGCCTATTTGTGAACTACCT +
Preference number: 4 (lower is better)
Translates to: LGMEAPAQTWEDGEEPSQQQIQQ*PICELP
Trigger: AGGTAGTTCACAAATAGGCCATTGTTGTATTTGTTG...TTGGGATGGCTCTTCTCCATCTTCCCAAGTCTGAGCTGGAGCCTCCATGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394897.5
CDS-3UTR CCA 90 bp ATCAAGAGGAAGGGAAGGAAGTCATATCCCAAGAGGGCACTTAACCTTAGTCCTGGGAATGCCAGTTTCTaGGTTATGGCTGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: IKRKGRKSYPKRALNLSPGNASF*VMAGFC
Trigger: ACAGAAACCAGCCATAACCCAGAAACTGGCATTCCC...AGGACTAAGGTTAAGTGCCCTCTTGGGATATGACTTCCTTCCCTTCCTCTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394897.5
CDS-3UTR CCA 90 bp TTGAACACTGGCAGGCAACACCCCAACAACCACACAGACCCCATAGCTCTCATTAGCACAGGTAGAACCTaGAGTCACTTGAATTGTATA +
Preference number: 4 (lower is better)
Translates to: LNTGRQHPNNHTDPIALISTGRT*SHLNCI
Trigger: TATACAATTCAAGTGACTCCAGGTTCTACCTGTGCT...AATGAGAGCTATGGGGTCTGTGTGGTTGTTGGGGTGTTGCCTGCCAGTGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507484.5
CDS-3UTR TCA 90 bp ACCGAGCTTTATTGGAGCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCCTGCTTTACAACCCATaGCAACAGACAAGCCGACTC +
Preference number: 4 (lower is better)
Translates to: TELYWSKECGHCLQQNVSLLYNP*QQTSRL
Trigger: GAGTCGGCTTGTCTGTTGTCATGGGTTGTAAAGCAG...GGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGCTCCAATAAAGCTCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp AAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAGTCGGGAGCATCTTGCATTaGCCTTTTATGTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: KWLGQKPDIGPLRSESEVGSILH*PFMSEG
Trigger: TCCTTCAGACATAAAAGGTCAATGCAAGATGCTCCC...GACTTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp CCTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTTGGTCTCAAACACACAGACTTCCAGAGTATGGCTaGTTTGCATCTGATGACTTG +
Preference number: 4 (lower is better)
Translates to: PSSTPKPIHPFSWSQTHRLPEYG*FASDDL
Trigger: CAAGTCATCAGATGCAAAGCAGCCATACTCTGGAAG...TCTGTGTGTTTGAGACCAAGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR GCA 90 bp CTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTTGGTCTCAAACACACAGACTGGCCACAACCTTTATaGGAACTTCCTTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLLLPSQYTLSLGLKHTDWPQPL*ELPLPL
Trigger: CAAAGGCAAAGGAAGTTCGCATAAAGGTTGTGGCCA...GTCTGTGTGTTTGAGACCAAGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR GCA 90 bp TTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTTGTATTCACAGAAGGTaGTGGTATTACCAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: FCSRDDPSSTPKPIHPFSCIHRR*WYYQSD
Trigger: ATCACTTTGGTAATACCAGCACCTTCTGTGAATACA...AGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CCA 90 bp ACCCTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTTGGTCTCAAACACACATTGCATCTGATGACTTaGCCTGTAGTACTCATGCTG +
Preference number: 4 (lower is better)
Translates to: TLLLLPSQYTLSLGLKHTLHLMT*PVVLML
Trigger: CAGCATGAGTACTACAGGCCAAGTCATCAGATGCAA...TGTGTGTTTGAGACCAAGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CCA 90 bp TCAATTATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAACTCTTCAATAGAAAATaGTGCACCAGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SIISIQLLQQGRPFFYSQLFNRK*CTRLPE
Trigger: CTCTGGAAGCCTGGTGCACCATTTTCTATTGAAGAG...TTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CCA 90 bp AGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGTACCACACAGTCCGGTaGCCACAACCTTTATGCGAA +
Preference number: 4 (lower is better)
Translates to: SVDTVYNKTFPGKLGFPKYHTVR*PQPLCE
Trigger: TTCGCATAAAGGTTGTGGCCACCGGACTGTGTGGTA...CTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp TGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAGTCAGAACATTCTCCACACTGTaGCAGAAAGAGTGTGATAAC +
Preference number: 4 (lower is better)
Translates to: WLGQKPDIGPLRSESEVRTFSTL*QKECDN
Trigger: GTTATCACACTCTTTCTGCCACAGTGTGGAGAATGT...TCTGACTTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
CDS-3UTR CCA 90 bp ATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAATGCTGGATCCCTAGGTaGCTTAGTTATGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: MKWLGQKPDIGPLRSESECWIPR*LSYEDG
Trigger: CCCATCTTCATAACTAAGCCACCTAGGGATCCAGCA...TTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCATTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp ATGGGAGCATCTTGCATTGACCTTTTATGTCTGAAGGATGTGGAGTTGAGTGATAGAACTAAGAGGGGCTaGGGCAGAAAGTCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: MGASCIDLLCLKDVELSDRTKRG*GRKSKG
Trigger: ACCCTTTGACTTTCTGCCCCAGCCCCTCTTAGTTCT...ATCACTCAACTCCACATCCTTCAGACATAAAAGGTCAATGCAAGATGCTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
3UTR CAA 72 bp TGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTaGGATTTCCCAAGACCCGAAGACTCCTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: WTLFTTKRFREN*DFPRPEDSSKF
Trigger: GAACTTGGAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp TCAATTATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAATGCCATTGAGTTGGTaGAATATCCTTTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: SIISIQLLQQGRPFFYSQMPLSW*NILWVL
Trigger: CAAGACCCAAAGGATATTTCACCAACTCAATGGCAT...TTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATAATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394897.5
CDS-3UTR TCA 90 bp CTCAGTAGCACCCAATTCCTGTGCCTTCTTAAATTTCTCCTTGTTGACATCCACAGGTCCACTGCGGAGTaGATCAGAAGTCAGAATATA +
Preference number: 4 (lower is better)
Translates to: LSSTQFLCLLKFLLVDIHRSTAE*IRSQNI
Trigger: TATATTCTGACTTCTGATTCACTCCGCAGTGGACCT...GTGGATGTCAACAAGGAGAAATTTAAGAAGGCACAGGAATTGGGTGCTACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507484.5
CDS-3UTR TCA 90 bp TCTGCAACTAGGAAGGGAACTCTTGTGTGTATGAGGGTTGGTAATAGGCTCTTTGGATGTGGAGTTGAGTaGTTCAAGCCAACCTTAATC +
Preference number: 4 (lower is better)
Translates to: SATRKGTLVCMRVGNRLFGCGVE*FKPTLI
Trigger: GATTAAGGTTGGCTTGAATCACTCAACTCCACATCC...AAAGAGCCTATTACCAACCCTCATACACACAAGAGTTCCCTTCCTAGTTGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp AATAGGCTCTTTTTGTATCAAGAGGAAGGGAAGGAAGTCATATCCCAAGAGGGCCTTCCAGAGTATGGCTaGTTTGCATCTGATGACTTG +
Preference number: 4 (lower is better)
Translates to: NRLFLYQEEGKEVISQEGLPEYG*FASDDL
Trigger: CAAGTCATCAGATGCAAAGCAGCCATACTCTGGAAG...GCCCTCTTGGGATATGACTTCCTTCCCTTCCTCTTGATACAAAAAGAGCCTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp AATAGGCTCTTTTTGTATCAAGAGGAAGGGAAGGAAGTCATATCCCAAGAGGGCTTGCATCTGATGACTTaGCCTGTAGTACTCATGCTG +
Preference number: 4 (lower is better)
Translates to: NRLFLYQEEGKEVISQEGLHLMT*PVVLML
Trigger: CAGCATGAGTACTACAGGCCAAGTCATCAGATGCAA...GCCCTCTTGGGATATGACTTCCTTCCCTTCCTCTTGATACAAAAAGAGCCTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp GCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTAACTTCCTTTGCCTTTaGTGGGGCCACTTCTACCTC +
Preference number: 4 (lower is better)
Translates to: AKSVDTVYNKTFPGKLGFNFLCL*WGHFYL
Trigger: GAGGTAGAAGTGGCCCCACCAAAGGCAAAGGAAGTT...AAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp TTCATGTCTAGGCCTGTGAGAGAGACATATAGTGTACAAGAATATAAAGGTCCAATTCCAGCCCCTTCATaGCCCAAGATGGTGGGATAC +
Preference number: 4 (lower is better)
Translates to: FMSRPVRETYSVQEYKGPIPAPS*PKMVGY
Trigger: GTATCCCACCATCTTGGGCCATGAAGGGGCTGGAAT...TGGACCTTTATATTCTTGTACACTATATGTCTCTCTCACAGGCCTAGACATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp GGATTTCCCAAGACCCGAAGACTCCTCCAAGTTCTCACTGTTAGTAAGGTCAATGATAACTTTGTCACCTaGTTTCACTGTGCTTACTCC +
Preference number: 4 (lower is better)
Translates to: GFPKTRRLLQVLTVSKVNDNFVT*FHCAYS
Trigger: GGAGTAAGCACAGTGAAACCAGGTGACAAAGTTATC...ATTGACCTTACTAACAGTGAGAACTTGGAGGAGTCTTCGGGTCTTGGGAAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp ATGGGAGCATCTTGCATTGACCTTTTATGTCTGAAGGATGTGGAGTTGAGTGATAGCACAGGTAGAACCTaGAGTCACCTTGGCAGTATT +
Preference number: 4 (lower is better)
Translates to: MGASCIDLLCLKDVELSDSTGRT*SHLGSI
Trigger: AATACTGCCAAGGTGACTCCAGGTTCTACCTGTGCT...ATCACTCAACTCCACATCCTTCAGACATAAAAGGTCAATGCAAGATGCTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp TGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTGTTTCCGGGAAAACTTaGATTTCCCAAGACCCGAAG +
Preference number: 4 (lower is better)
Translates to: CLQQNVSGKTWISQDPKTVSGKT*ISQDPK
Trigger: CTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAAC...AGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp TTTTGTTTCTTTAGAGTAAAATGGCAGAGTTTCATGTCTAGGCCTGTGAGAGAGTCACCTTGGCAGTATTaGTTGCAGCACCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: FCFFRVKWQSFMSRPVRESPWQY*LQHQTQ
Trigger: CTGGGTTTGGTGCTGCAATCAATACTGCCAAGGTGA...CTCTCTCACAGGCCTAGACATGAAACTCTGCCATTTTACTCTAAAGAAACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp GCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTGTGGATCCTGCTAAATaGTCCACCTCCTGTATGATG +
Preference number: 4 (lower is better)
Translates to: AKSVDTVYNKTFPGKLGFVDPAK*STSCMM
Trigger: CATCATACAGGAGGTGGATCATTTAGCAGGATCCAC...AAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp AAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGATCCCAAGTCCAGAGTaGATAGGTTTCATAGCACCC +
Preference number: 4 (lower is better)
Translates to: KNNFDEMVRSEARYRSTAIPSPE*IGFIAP
Trigger: GGGTGCTATGAAACCTATTCACTCTGGACTTGGGAT...CGCAGTGGACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp TACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTCCTCGAATTAGGAATCCTATaGATAATTCCTCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: YNKTFPGKLGFPKTRRLLELGIL*IIPLLP
Trigger: GGGGAGAAGAGGAATTATTCATAGGATTCCTAATTC...GAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394897.5
CDS-3UTR TCA 90 bp TGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAGTCAGAGAACCTGGAGTCACTTaGATTGTATACAAAAATTGC +
Preference number: 4 (lower is better)
Translates to: WLGQKPDIGPLRSESEVREPGVT*IVYKNC
Trigger: GCAATTTTTGTATACAATTCAAGTGACTCCAGGTTC...TCTGACTTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507484.5
CDS-3UTR GCA 90 bp TCAATTATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAATTCAATAGAAAATGGTaGACCAGGCTTCCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: SIISIQLLQQGRPFFYSQFNRKW*TRLPEY
Trigger: ATACTCTGGAAGCCTGGTGCACCATTTTCTATTGAA...TTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR GCA 90 bp TCCTCCAAGTTCTCACTGTTAGTAAGGTCAATTTGGGGGCAGAACAGGAACATGTTCAATAGAAAATGGTaGACCAGGCTTCCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: SSKFSLLVRSIWGQNRNMFNRKW*TRLPEY
Trigger: ATACTCTGGAAGCCTGGTGCACCATTTTCTATTGAA...CATGTTCCTGTTCTGCCCCCAAATTGACCTTACTAACAGTGAGAACTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp AGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGTGGCCACAACCTTTATaGGAACTTCCTTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: SVDTVYNKTFPGKLGFPKWPQPL*ELPLPL
Trigger: CAAAGGCAAAGGAAGTTCGCATAAAGGTTGTGGCCA...CTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp TGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTTGGCCACAACCTTTATaGGAACTTCCTTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: CLQQNVSGKTWISQDPKTWPQPL*ELPLPL
Trigger: CAAAGGCAAAGGAAGTTCGCATAAAGGTTGTGGCCA...AGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp GTAAAATGGCAGAGTTTCATGTCTAGGCCTGTGAGAGAGACATATAGTGTACAACTTGGCAGTATTGATTaGAGCACCAAACCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: VKWQSFMSRPVRETYSVQLGSID*STKPSG
Trigger: TCCACTGGGTTTGGTGCTGCAATCAATACTGCCAAG...TTGTACACTATATGTCTCTCTCACAGGCCTAGACATGAAACTCTGCCATTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp AAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGCAAAGTTTACTGACATaGAGGGACCCCTGTGTGATC +
Preference number: 4 (lower is better)
Translates to: KNNFDEMVRSEARYRSTAQSLLT*RDPCVI
Trigger: GATCACACAGGGGTCCCTGCATGTCAGTAAACTTTG...CGCAGTGGACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp TGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTGGAACATGCCTTAGCTaGTGTCAGGAAATAGAAGAG +
Preference number: 4 (lower is better)
Translates to: CLQQNVSGKTWISQDPKTGTCLS*CQEIEE
Trigger: CTCTTCTATTTCCTGACAGCAGCTAAGGCATGTTCC...AGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp AAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAGTCACTTTGTCACCTTTATaGGAACTTCCTTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: KWLGQKPDIGPLRSESEVTLSPL*ELPLPL
Trigger: CAAAGGCAAAGGAAGTTCGCATAAAGGTGACAAAGT...GACTTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507484.5
CDS-3UTR CCA 90 bp TTTATTGGAGCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAATACCACACAGTCCGGTaGCCACAACCTTTATGCGAA +
Preference number: 4 (lower is better)
Translates to: FIGAKSVDTVYNKTFPGKYHTVR*PQPLCE
Trigger: TTCGCATAAAGGTTGTGGCCACCGGACTGTGTGGTA...TTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGCTCCAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp GCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTGTTTCCGGGAAAACTTaGATTTCCCAAGACCCGAAG +
Preference number: 4 (lower is better)
Translates to: AKSVDTVYNKTFPGKLGFVSGKT*ISQDPK
Trigger: CTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAAC...AAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp GGAGATGCTTTACAAATTCCTGAAAGCCTCTTCAATTATCAGTATACAGCTTCTCCACTGATTTTGAGTTaGACACTGGCAGGCAACACC +
Preference number: 4 (lower is better)
Translates to: GDALQIPESLFNYQYTASPLILS*TLAGNT
Trigger: GGTGTTGCCTGCCAGTGTTCAACTCAAAATCAGTGG...AGAAGCTGTATACTGATAATTGAAGAGGCTTTCAGGAATTTGTAAAGCATCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237653.11
CDS-3UTR TCA 90 bp GGTTACGTAAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGATTTTGAGTTaGACACTGGCAGGCAACACC +
Preference number: 4 (lower is better)
Translates to: GYVRTILMKWLGQKPDIGPLILS*TLAGNT
Trigger: GGTGTTGCCTGCCAGTGTTCAACTCAAAATCAGTGG...ACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTTACGTAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394899.6
ENST00000507484.5
CDS-3UTR TCA 90 bp ACCGAGCTTTATTGGAGCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCATGCCATTGAGTTGGTaGAATATCCTTTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TELYWSKECGHCLQQNVSMPLSW*NILWVL
Trigger: CAAGACCCAAAGGATATTTCACCAACTCAATGGCAT...GGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGCTCCAATAAAGCTCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp AAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGGGAGCATCTTGCATTaGCCTTTTATGTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: KNNFDEMVRSEARYRSTAGSILH*PFMSEG
Trigger: TCCTTCAGACATAAAAGGTCAATGCAAGATGCTCCC...CGCAGTGGACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp TTCATGTCTAGGCCTGTGAGAGAGACATATAGTGTACAAGAATATAAAGGTCCAGTGGATCCTGCTAAATaGTCCACCTCCTGTATGATG +
Preference number: 4 (lower is better)
Translates to: FMSRPVRETYSVQEYKGPVDPAK*STSCMM
Trigger: CATCATACAGGAGGTGGATCATTTAGCAGGATCCAC...TGGACCTTTATATTCTTGTACACTATATGTCTCTCTCACAGGCCTAGACATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp TCTGCAACTAGGAAGGGAACTCTTGTGTGTATGAGGGTTGGTAATAGGCTCTTTTTCAATAGAAAATGGTaGACCAGGCTTCCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: SATRKGTLVCMRVGNRLFFNRKW*TRLPEY
Trigger: ATACTCTGGAAGCCTGGTGCACCATTTTCTATTGAA...AAAGAGCCTATTACCAACCCTCATACACACAAGAGTTCCCTTCCTAGTTGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp GGATTTCCCAAGACCCGAAGACTCCTCCAAGTTCTCACTGTTAGTAAGGTCAATTGTATTCACAGAAGGTaGTGGTATTACCAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: GFPKTRRLLQVLTVSKVNCIHRR*WYYQSD
Trigger: ATCACTTTGGTAATACCAGCACCTTCTGTGAATACA...ATTGACCTTACTAACAGTGAGAACTTGGAGGAGTCTTCGGGTCTTGGGAAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp ATCAAGAGGAAGGGAAGGAAGTCATATCCCAAGAGGGCACTTAACCTTAGTCCTTGTATTCACAGAAGGTaGTGGTATTACCAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: IKRKGRKSYPKRALNLSPCIHRR*WYYQSD
Trigger: ATCACTTTGGTAATACCAGCACCTTCTGTGAATACA...AGGACTAAGGTTAAGTGCCCTCTTGGGATATGACTTCCTTCCCTTCCTCTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp ATCAAGAGGAAGGGAAGGAAGTCATATCCCAAGAGGGCACTTAACCTTAGTCCTAAAATGGGAGCATCTTaGATTGACCTTTTATGTCTG +
Preference number: 4 (lower is better)
Translates to: IKRKGRKSYPKRALNLSPKMGAS*IDLLCL
Trigger: CAGACATAAAAGGTCAATGCAAGATGCTCCCATTTT...AGGACTAAGGTTAAGTGCCCTCTTGGGATATGACTTCCTTCCCTTCCTCTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp TTCATGTCTAGGCCTGTGAGAGAGACATATAGTGTACAAGAATATAAAGGTCCAGGTAGAAGGATTGGATaGCACAAAGCATTACTGGGG +
Preference number: 4 (lower is better)
Translates to: FMSRPVRETYSVQEYKGPGRRIG*HKALLG
Trigger: CCCCAGTAATGCTTTGTGGCATCCAATCCTTCTACC...TGGACCTTTATATTCTTGTACACTATATGTCTCTCTCACAGGCCTAGACATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp TTCAATTATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCACCATCAGACATCAGTTaGGTTTTTGACTGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: FNYQYTASAAGTTLLLLPPSDIS*VFDCLN
Trigger: ATTCAAACAGTCAAAAACCCAACTGATGTCTGATGG...TGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATAATTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CCA 90 bp TACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTCCTCCCATCAGACATCAGTTaGGTTTTTGACTGTTTGAAT +
Preference number: 4 (lower is better)
Translates to: YNKTFPGKLGFPKTRRLLPSDIS*VFDCLN
Trigger: ATTCAAACAGTCAAAAACCCAACTGATGTCTGATGG...GAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp TTTTGTTTCTTTAGAGTAAAATGGCAGAGTTTCATGTCTAGGCCTGTGAGAGAGGCCACAAAGCATTACTaGGGCTCATTTTCCCCTAAG +
Preference number: 4 (lower is better)
Translates to: FCFFRVKWQSFMSRPVREATKHY*GSFSPK
Trigger: CTTAGGGGAAAATGAGCCCCAGTAATGCTTTGTGGC...CTCTCTCACAGGCCTAGACATGAAACTCTGCCATTTTACTCTAAAGAAACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp CACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGATCAATCTTGGCAACTaGGATTTCCTTTATCACTGT +
Preference number: 4 (lower is better)
Translates to: HCLQQNVSGKTWISQDPKINLGN*DFLYHC
Trigger: ACAGTGATAAAGGAAATCTCAGTTGCCAAGATTGAT...CTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp CTGGGTTACGTAAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTTTCTTTAAGTCCTaGGGGTTGAGGCACTCAGTA +
Preference number: 4 (lower is better)
Translates to: LGYVRTILMKWLGQKPDIGFFKS*GLRHSV
Trigger: TACTGAGTGCCTCAACCCTCAGGACTTAAAGAAACC...TATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTTACGTAACCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
ENST00000512708.5
CDS-3UTR TCA 90 bp TTTGGGTCTTGCATGTATTACATTGTACTTAAAGTAACAGGATACAGCGGATACCTTCAAAGAACGTCCTaGGAAGAACAACTGGCCACT +
Preference number: 4 (lower is better)
Translates to: FGSCMYYIVLKVTGYSGYLQRTS*EEQLAT
Trigger: AGTGGCCAGTTGTTCTTCTCAGGACGTTCTTTGAAG...GTATCCGCTGTATCCTGTTACTTTAAGTACAATGTAATACATGCAAGACCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507484.5
CDS-3UTR TCA 90 bp TTCATGTCTAGGCCTGTGAGAGAGACATATAGTGTACAAGAATATAAAGGTCCAAGGTCCACTGCGGAGTaGATCAGAAGTCAGAATATA +
Preference number: 4 (lower is better)
Translates to: FMSRPVRETYSVQEYKGPRSTAE*IRSQNI
Trigger: TATATTCTGACTTCTGATTCACTCCGCAGTGGACCT...TGGACCTTTATATTCTTGTACACTATATGTCTCTCTCACAGGCCTAGACATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp TACGTAAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCAATCCCAAGTCCAGAGTaGATAGGTTTCATAGCACCC +
Preference number: 4 (lower is better)
Translates to: YVRTILMKWLGQKPDIGPIPSPE*IGFIAP
Trigger: GGGTGCTATGAAACCTATTCACTCTGGACTTGGGAT...TGGACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTTACGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp TTCAATTATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAATTGTATACAAAAATTaGCCTCAGAATTCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: FNYQYTASAAGTTLLLLPIVYKN*PQNSGK
Trigger: CTTGCCTGAATTCTGAGGGCAATTTTTGTATACAAT...TGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATAATTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR GCA 90 bp TACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTCCTCATTGTATACAAAAATTaGCCTCAGAATTCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: YNKTFPGKLGFPKTRRLLIVYKN*PQNSGK
Trigger: CTTGCCTGAATTCTGAGGGCAATTTTTGTATACAAT...GAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp TACGTAAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTTGGCAGTATTGATTaGAGCACCAAACCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: YVRTILMKWLGQKPDIGPLGSID*STKPSG
Trigger: TCCACTGGGTTTGGTGCTGCAATCAATACTGCCAAG...TGGACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTTACGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp TCAATTATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAATTCACAGAAGGTGCTaGTATTACCAAAGTGATATA +
Preference number: 4 (lower is better)
Translates to: SIISIQLLQQGRPFFYSQIHRRC*YYQSDI
Trigger: TATATCACTTTGGTAATACCAGCACCTTCTGTGAAT...TTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATAATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CCA 90 bp AAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAGTCATTCACAGAAGGTGCTaGTATTACCAAAGTGATATA +
Preference number: 4 (lower is better)
Translates to: KWLGQKPDIGPLRSESEVIHRRC*YYQSDI
Trigger: TATATCACTTTGGTAATACCAGCACCTTCTGTGAAT...GACTTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp TTTGGGTCTTGCATGTATTACATTGTACTTAAAGTAACAGGATACAGCGGATACGCCACAAAGCATTACTaGGGCTCATTTTCCCCTAAG +
Preference number: 4 (lower is better)
Translates to: FGSCMYYIVLKVTGYSGYATKHY*GSFSPK
Trigger: CTTAGGGGAAAATGAGCCCCAGTAATGCTTTGTGGC...GTATCCGCTGTATCCTGTTACTTTAAGTACAATGTAATACATGCAAGACCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394897.5
CDS-3UTR CCA 90 bp GTAAAATGGCAGAGTTTCATGTCTAGGCCTGTGAGAGAGACATATAGTGTACAATTAGTAAGGTCAATTTaGGGGCAGAACAGGAACATG +
Preference number: 4 (lower is better)
Translates to: VKWQSFMSRPVRETYSVQLVRSI*GQNRNM
Trigger: CATGTTCCTGTTCTGCCCCCAAATTGACCTTACTAA...TTGTACACTATATGTCTCTCTCACAGGCCTAGACATGAAACTCTGCCATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp GGTTACGTAAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTAGGTCCACTGCGGAGTaGATCAGAAGTCAGAATATA +
Preference number: 4 (lower is better)
Translates to: GYVRTILMKWLGQKPDIGRSTAE*IRSQNI
Trigger: TATATTCTGACTTCTGATTCACTCCGCAGTGGACCT...ACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTTACGTAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
ENST00000512708.5
CDS-3UTR GCA 90 bp TACGTAAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTTCCAGAGTATGGCTaGTTTGCATCTGATGACTTG +
Preference number: 4 (lower is better)
Translates to: YVRTILMKWLGQKPDIGPLPEYG*FASDDL
Trigger: CAAGTCATCAGATGCAAAGCAGCCATACTCTGGAAG...TGGACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTTACGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
CDS-3UTR CCA 90 bp TTACGTAAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCTTGCATCTGATGACTTaGCCTGTAGTACTCATGCTG +
Preference number: 4 (lower is better)
Translates to: LRKNNFDEMVRSEARYRSLHLMT*PVVLML
Trigger: CAGCATGAGTACTACAGGCCAAGTCATCAGATGCAA...GGACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTTACGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
CDS-3UTR CCA 90 bp GGAGATGCTTTACAAATTCCTGAAAGCCTCTTCAATTATCAGTATACAGCTTCTCTCTTCAATAGAAAATaGTGCACCAGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: GDALQIPESLFNYQYTASLFNRK*CTRLPE
Trigger: CTCTGGAAGCCTGGTGCACCATTTTCTATTGAAGAG...AGAAGCTGTATACTGATAATTGAAGAGGCTTTCAGGAATTTGTAAAGCATCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CCA 90 bp TACGTAAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTCTTCAATAGAAAATaGTGCACCAGGCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: YVRTILMKWLGQKPDIGPLFNRK*CTRLPE
Trigger: CTCTGGAAGCCTGGTGCACCATTTTCTATTGAAGAG...TGGACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTTACGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
CDS-3UTR CCA 90 bp ATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAATTCACAGAAGGTGCTaGTATTACCAAAGTGATATA +
Preference number: 4 (lower is better)
Translates to: MKWLGQKPDIGPLRSESEIHRRC*YYQSDI
Trigger: TATATCACTTTGGTAATACCAGCACCTTCTGTGAAT...TTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCATTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp ACCGAGCTTTATTGGAGCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCTTGGAGCAAAGAGTGTaGACACTGTTTACAACAAAA +
Preference number: 4 (lower is better)
Translates to: TELYWSKECGHCLQQNVSLEQRV*TLFTTK
Trigger: TTTTGTTGTAAACAGTGTCCACACTCTTTGCTCCAA...GGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGCTCCAATAAAGCTCGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp AGTCATATCCCAAGAGGGCACTTAACCTTAGTCCTAATTCTAGGAGAACTAAGAATCAATCTTGGCAACTaGGATTTCCTTTATCACTGT +
Preference number: 4 (lower is better)
Translates to: SHIPRGHLTLVLILGELRINLGN*DFLYHC
Trigger: ACAGTGATAAAGGAAATCTCAGTTGCCAAGATTGAT...TCTTAGTTCTCCTAGAATTAGGACTAAGGTTAAGTGCCCTCTTGGGATATGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp GCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTGTTATGAGAGTCCTTTaGTATCATGTGAAAACCATG +
Preference number: 4 (lower is better)
Translates to: AKSVDTVYNKTFPGKLGFVMRVL*YHVKTM
Trigger: CATGGTTTTCACATGATATCAAAGGACTCTCATAAC...AAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp TGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTATTGTATACAAAAATTaGCCTCAGAATTCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: CLQQNVSGKTWISQDPKTIVYKN*PQNSGK
Trigger: CTTGCCTGAATTCTGAGGGCAATTTTTGTATACAAT...AGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp TACGTAAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCAACATTCTCCACACTGTaGCAGAAAGAGTGTGATAAC +
Preference number: 4 (lower is better)
Translates to: YVRTILMKWLGQKPDIGPTFSTL*QKECDN
Trigger: GTTATCACACTCTTTCTGCCACAGTGTGGAGAATGT...TGGACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTTACGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
CDS-3UTR GCA 90 bp TTCATGTCTAGGCCTGTGAGAGAGACATATAGTGTACAAGAATATAAAGGTCCAAAAATGGGAGCATCTTaGATTGACCTTTTATGTCTG +
Preference number: 4 (lower is better)
Translates to: FMSRPVRETYSVQEYKGPKMGAS*IDLLCL
Trigger: CAGACATAAAAGGTCAATGCAAGATGCTCCCATTTT...TGGACCTTTATATTCTTGTACACTATATGTCTCTCTCACAGGCCTAGACATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CCA 90 bp AGCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTTCTTTAGAGTAAAATaGCAGAGTTTCATGTCTAGG +
Preference number: 4 (lower is better)
Translates to: SKECGHCLQQNVSGKTWIFFRVK*QSFMSR
Trigger: CCTAGACATGAAACTCTGCCATTTTACTCTAAAGAA...AATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR TCA 90 bp CTGGGTTACGTAAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGTTATGAGAGTCCTTTaGTATCATGTGAAAACCATG +
Preference number: 4 (lower is better)
Translates to: LGYVRTILMKWLGQKPDIVMRVL*YHVKTM
Trigger: CATGGTTTTCACATGATATCAAAGGACTCTCATAAC...TATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTTACGTAACCCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR GCA 90 bp TACGTAAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCAATTGTATACAAAAATTaGCCTCAGAATTCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: YVRTILMKWLGQKPDIGPIVYKN*PQNSGK
Trigger: CTTGCCTGAATTCTGAGGGCAATTTTTGTATACAAT...TGGACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTTACGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
CDS-3UTR CAA 90 bp CACCCCAACAACCACACAGACCCCATAGCTCTCATTGCAGGAGGCGAGGGCAGCCAGAGTATGGCTGCTTaGCATCTGATGACTTGGCCT +
Preference number: 5 (lower is better)
Translates to: HPNNHTDPIALIAGGEGSQSMAA*HLMTWP
Trigger: AGGCCAAGTCATCAGATGCAAAGCAGCCATACTCTG...GCTGCCCTCGCCTCCTGCAATGAGAGCTATGGGGTCTGTGTGGTTGTTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507484.5
CDS-3UTR CAA 90 bp GAGCAGAGCAGAGTTGGGCATGGAGGCTCCAGCTCAGACTTGGGAAGATGGAGAGTCACCTTGGCAGTATaGATTGCAGCACCAAACCCA +
Preference number: 5 (lower is better)
Translates to: EQSRVGHGGSSSDLGRWRVTLAV*IAAPNP
Trigger: TGGGTTTGGTGCTGCAATCAATACTGCCAAGGTGAC...TCTCCATCTTCCCAAGTCTGAGCTGGAGCCTCCATGCCCAACTCTGCTCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp TTGATATCATGTGAAAACCATGATGGGAGAGAGAGACTGAGGGTGCAGCCCACCAAGAGCAGAGCAGAGTaGGGCATGGAGGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: LISCENHDGRERLRVQPTKSRAE*GMEAPA
Trigger: AGCTGGAGCCTCCATGCCCAACTCTGCTCTGCTCTT...GGTGGGCTGCACCCTCAGTCTCTCTCTCCCATCATGGTTTTCACATGATATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp GAGCAGAGCAGAGTTGGGCATGGAGGCTCCAGCTCAGACTTGGGAAGATGGAGACCGCAGATGAATTTATaGAGAAAGGGAGATCCTGTA +
Preference number: 5 (lower is better)
Translates to: EQSRVGHGGSSSDLGRWRPQMNL*RKGDPV
Trigger: TACAGGATCTCCCTTTCTCAATAAATTCATCTGCGG...TCTCCATCTTCCCAAGTCTGAGCTGGAGCCTCCATGCCCAACTCTGCTCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp TTGATATCATGTGAAAACCATGATGGGAGAGAGAGACTGAGGGTGCAGCCCACCGAACTTCCTTTGCCTTaGGTGGGGCCACTTCTACCT +
Preference number: 5 (lower is better)
Translates to: LISCENHDGRERLRVQPTELPLP*VGPLLP
Trigger: AGGTAGAAGTGGCCCCACCAAAGGCAAAGGAAGTTC...GGTGGGCTGCACCCTCAGTCTCTCTCTCCCATCATGGTTTTCACATGATATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp CAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACGTCACCTTGGCAGTATaGATTGCAGCACCAAACCCA +
Preference number: 5 (lower is better)
Translates to: QYTASAAGTTLLLLPSQYVTLAV*IAAPNP
Trigger: TGGGTTTGGTGCTGCAATCAATACTGCCAAGGTGAC...GTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CAA 90 bp CAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACACCCTTTCAGGAGAGGAGAGATTaGTGCCAAGGAGATAGGATA +
Preference number: 5 (lower is better)
Translates to: QLLQQGRPFFYSQANTPFQERRD*CQGDRI
Trigger: TATCCTATCTCCTTGGCACAAATCTCTCCTCTCCTG...AAAGGGTGTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394897.5
CDS-3UTR CAA 90 bp ATCAAGAGGAAGGGAAGGAAGTCATATCCCAAGAGGGCACTTAACCTTAGTCCTGGCTCCAGCTCAGACTaGGGAAGATGGAGAAGAGCC +
Preference number: 5 (lower is better)
Translates to: IKRKGRKSYPKRALNLSPGSSSD*GRWRRA
Trigger: GGCTCTTCTCCATCTTCCCAAGTCTGAGCTGGAGCC...AGGACTAAGGTTAAGTGCCCTCTTGGGATATGACTTCCTTCCCTTCCTCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp AGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACACAGAGTATGGCTGCTTaGCATCTGATGACTTGGCCT +
Preference number: 5 (lower is better)
Translates to: SIQLLQQGRPFFYSQANTQSMAA*HLMTWP
Trigger: AGGCCAAGTCATCAGATGCAAAGCAGCCATACTCTG...TGTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CAA 90 bp CAATTATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGGAACTTCCTTTGCCTTaGGTGGGGCCACTTCTACCT +
Preference number: 5 (lower is better)
Translates to: QLSVYSFCSRDDPSSTPKELPLP*VGPLLP
Trigger: AGGTAGAAGTGGCCCCACCAAAGGCAAAGGAAGTTC...CTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CAA 90 bp GGAAGCAGGCCCCTAAAGGGAAACACAGGATGCCCAACTCATAAGAATCAGACTGCCACTGATTTTGAGTaGAACACTGGCAGGCAACAC +
Preference number: 5 (lower is better)
Translates to: GSRPLKGNTGCPTHKNQTATDFE*NTGRQH
Trigger: GTGTTGCCTGCCAGTGTTCAACTCAAAATCAGTGGC...AGTCTGATTCTTATGAGTTGGGCATCCTGTGTTTCCCTTTAGGGGCCTGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394899.6
CDS-3UTR CAA 90 bp GCTGCCAGAACGTCCAGATTTCCAATGGCCTCAAAGCAGAAGTCTATACCAGCAGCCACTGATTTTGAGTaGAACACTGGCAGGCAACAC +
Preference number: 5 (lower is better)
Translates to: AARTSRFPMASKQKSIPAATDFE*NTGRQH
Trigger: GTGTTGCCTGCCAGTGTTCAACTCAAAATCAGTGGC...TGCTGGTATAGACTTCTGCTTTGAGGCCATTGGAAATCTGGACGTTCTGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507484.5
CDS-3UTR CAA 90 bp TTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTAGGAACCGAGCTTTATaGGAGCAAAGAGTGTGGACA +
Preference number: 5 (lower is better)
Translates to: FCSRDDPSSTPKPIHPFSRNRAL*EQRVWT
Trigger: TGTCCACACTCTTTGCTCCAATAAAGCTCGGTTCCT...AGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394897.5
CDS-3UTR CAA 90 bp AGCTCTCATTGCAGGAGGCGAGGGCAGCTGCCAGAACGTCCAGATTTCCAATGGCTGGAGTCACTTGAATaGTATACAAAAATTGCCCTC +
Preference number: 5 (lower is better)
Translates to: SSHCRRRGQLPERPDFQWLESLE*YTKIAL
Trigger: GAGGGCAATTTTTGTATACAATTCAAGTGACTCCAG...CCATTGGAAATCTGGACGTTCTGGCAGCTGCCCTCGCCTCCTGCAATGAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507484.5
CDS-3UTR CAA 90 bp ACCCTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTTGGTCTCAAACACACAAGGCTCTCCCGCTGCTaGATGGAAGTTCCTAAGTGT +
Preference number: 5 (lower is better)
Translates to: TLLLLPSQYTLSLGLKHTRLSRC*MEVPKC
Trigger: ACACTTAGGAACTTCCATCAAGCAGCGGGAGAGCCT...TGTGTGTTTGAGACCAAGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237653.11
CDS-3UTR CAA 90 bp TTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTTTTGCATCTGATGACTaGGCCTGTAGTACTCATGCT +
Preference number: 5 (lower is better)
Translates to: FCSRDDPSSTPKPIHPFSFASDD*ACSTHA
Trigger: AGCATGAGTACTACAGGCCAAGTCATCAGATGCAAA...AGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CAA 90 bp ACCCTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTTGGTCTCAAACACACAGAACTTCCTTTGCCTTaGGTGGGGCCACTTCTACCT +
Preference number: 5 (lower is better)
Translates to: TLLLLPSQYTLSLGLKHTELPLP*VGPLLP
Trigger: AGGTAGAAGTGGCCCCACCAAAGGCAAAGGAAGTTC...TGTGTGTTTGAGACCAAGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CAA 90 bp TTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTGCGACTGCATCAATCTaGGCAACTGAGATTTCCTTT +
Preference number: 5 (lower is better)
Translates to: FCSRDDPSSTPKPIHPFSATASI*ATEISF
Trigger: AAAGGAAATCTCAGTTGCCAAGATTGATGCAGTCGC...AGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CAA 90 bp TGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAGTCAGAGTCGGGGTAGAAGGATaGGATGCCACAAAGCATTAC +
Preference number: 5 (lower is better)
Translates to: WLGQKPDIGPLRSESEVRVGVEG*DATKHY
Trigger: GTAATGCTTTGTGGCATCCAATCCTTCTACCCCGAC...TCTGACTTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp TGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTAAGAGCAGAGCAGAGTaGGGCATGGAGGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: CLQQNVSGKTWISQDPKTKSRAE*GMEAPA
Trigger: AGCTGGAGCCTCCATGCCCAACTCTGCTCTGCTCTT...AGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp TACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTCCTCCAGAGTATGGCTGCTTaGCATCTGATGACTTGGCCT +
Preference number: 5 (lower is better)
Translates to: YNKTFPGKLGFPKTRRLLQSMAA*HLMTWP
Trigger: AGGCCAAGTCATCAGATGCAAAGCAGCCATACTCTG...GAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp TCAATTATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGAACCTGGAGTCACCTaGGCAGTATTGATTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SIISIQLLQQGRPFFYSQEPGVT*AVLIAA
Trigger: TGCTGCAATCAATACTGCCAAGGTGACTCCAGGTTC...TTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATAATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CAA 90 bp TTCAATTATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAGCCACTGATTTTGAGTaGAACACTGGCAGGCAACAC +
Preference number: 5 (lower is better)
Translates to: FNYQYTASAAGTTLLLLPATDFE*NTGRQH
Trigger: GTGTTGCCTGCCAGTGTTCAACTCAAAATCAGTGGC...TGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATAATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237653.11
CDS-3UTR CAA 90 bp CATGGAGGCTCCAGCTCAGACTTGGGAAGATGGAGAAGAGCCATCCCAAGTCCATTGGTGAAATATCCTTaGGGTCTTGCATGTATTACA +
Preference number: 5 (lower is better)
Translates to: HGGSSSDLGRWRRAIPSPLVKYP*GLACIT
Trigger: TGTAATACATGCAAGACCCAAAGGATATTTCACCAA...TGGACTTGGGATGGCTCTTCTCCATCTTCCCAAGTCTGAGCTGGAGCCTCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp GGATTTCCCAAGACCCGAAGACTCCTCCAAGTTCTCACTGTTAGTAAGGTCAATGTCGGGGTAGAAGGATaGGATGCCACAAAGCATTAC +
Preference number: 5 (lower is better)
Translates to: GFPKTRRLLQVLTVSKVNVGVEG*DATKHY
Trigger: GTAATGCTTTGTGGCATCCAATCCTTCTACCCCGAC...ATTGACCTTACTAACAGTGAGAACTTGGAGGAGTCTTCGGGTCTTGGGAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp AAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGGCTCCAGCTCAGACTaGGGAAGATGGAGAAGAGCC +
Preference number: 5 (lower is better)
Translates to: KNNFDEMVRSEARYRSTAGSSSD*GRWRRA
Trigger: GGCTCTTCTCCATCTTCCCAAGTCTGAGCTGGAGCC...CGCAGTGGACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp TATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAAAAGAGTGTGATAACTTaGTCACCTGGTTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: YQYTASAAGTTLLLLPSQKSVIT*SPGFTV
Trigger: CACAGTGAAACCAGGTGACAAAGTTATCACACTCTT...TTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CAA 90 bp TTTTCTGCTGGATCCCTAGGTGGCTTAGTTATGAAGATGGGTACTATGAACTGCGAACCTGGAGTCACCTaGGCAGTATTGATTGCAGCA +
Preference number: 5 (lower is better)
Translates to: FSAGSLGGLVMKMGTMNCEPGVT*AVLIAA
Trigger: TGCTGCAATCAATACTGCCAAGGTGACTCCAGGTTC...GCAGTTCATAGTACCCATCTTCATAACTAAGCCACCTAGGGATCCAGCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp CACTTAACCTTAGTCCTAATTCTAGGAGAACTAAGAGGGGCTGGGGCAGAAAGTCTGAAGGATGTGGAGTaGAGTGATTCAAGCCAACCT +
Preference number: 5 (lower is better)
Translates to: HLTLVLILGELRGAGAESLKDVE*SDSSQP
Trigger: AGGTTGGCTTGAATCACTCAACTCCACATCCTTCAG...ACTTTCTGCCCCAGCCCCTCTTAGTTCTCCTAGAATTAGGACTAAGGTTAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp CGAGGGCAGCTGCCAGAACGTCCAGATTTCCAATGGCCTCAAAGCAGAAGTCTAAAGAGTGTGATAACTTaGTCACCTTTATGCGAACTT +
Preference number: 5 (lower is better)
Translates to: RGQLPERPDFQWPQSRSLKSVIT*SPLCEL
Trigger: AAGTTCGCATAAAGGTGACAAAGTTATCACACTCTT...TAGACTTCTGCTTTGAGGCCATTGGAAATCTGGACGTTCTGGCAGCTGCCCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507484.5
CDS-3UTR CAA 90 bp TGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAGTCAGAAAGAGTGTGATAACTTaGTCACCTGGTTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: WLGQKPDIGPLRSESEVRKSVIT*SPGFTV
Trigger: CACAGTGAAACCAGGTGACAAAGTTATCACACTCTT...TCTGACTTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp ATCAAGAGGAAGGGAAGGAAGTCATATCCCAAGAGGGCACTTAACCTTAGTCCTGCGACTGCATCAATCTaGGCAACTGAGATTTCCTTT +
Preference number: 5 (lower is better)
Translates to: IKRKGRKSYPKRALNLSPATASI*ATEISF
Trigger: AAAGGAAATCTCAGTTGCCAAGATTGATGCAGTCGC...AGGACTAAGGTTAAGTGCCCTCTTGGGATATGACTTCCTTCCCTTCCTCTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp CAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATACTTAAATTTCTCCTTGTaGACATCCACTCCAATGATC +
Preference number: 5 (lower is better)
Translates to: QYTASAAGTTLLLLPSQYLNFSL*TSTPMI
Trigger: GATCATTGGAGTGGATGTCAACAAGGAGAAATTTAA...GTATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CAA 90 bp AATAGGCTCTTTTTGTATCAAGAGGAAGGGAAGGAAGTCATATCCCAAGAGGGCCTGAAGGATGTGGAGTaGAGTGATTCAAGCCAACCT +
Preference number: 5 (lower is better)
Translates to: NRLFLYQEEGKEVISQEGLKDVE*SDSSQP
Trigger: AGGTTGGCTTGAATCACTCAACTCCACATCCTTCAG...GCCCTCTTGGGATATGACTTCCTTCCCTTCCTCTTGATACAAAAAGAGCCTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp TCTGCAACTAGGAAGGGAACTCTTGTGTGTATGAGGGTTGGTAATAGGCTCTTTCAGGAGAGGAGAGATTaGTGCCAAGGAGATAGGATA +
Preference number: 5 (lower is better)
Translates to: SATRKGTLVCMRVGNRLFQERRD*CQGDRI
Trigger: TATCCTATCTCCTTGGCACAAATCTCTCCTCTCCTG...AAAGAGCCTATTACCAACCCTCATACACACAAGAGTTCCCTTCCTAGTTGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp TTCAATTATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAGTTAGTAAGGTCAATTaGGGGGCAGAACAGGAACAT +
Preference number: 5 (lower is better)
Translates to: FNYQYTASAAGTTLLLLPVSKVN*GAEQEH
Trigger: ATGTTCCTGTTCTGCCCCCAAATTGACCTTACTAAC...TGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGATAATTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394897.5
CDS-3UTR CAA 90 bp ACCCTTCTTCTACTCCCAAGCCAATACACCCTTTCTCTTGGTCTCAAACACACACCGCAGATGAATTTATaGAGAAAGGGAGATCCTGTA +
Preference number: 5 (lower is better)
Translates to: TLLLLPSQYTLSLGLKHTPQMNL*RKGDPV
Trigger: TACAGGATCTCCCTTTCTCAATAAATTCATCTGCGG...TGTGTGTTTGAGACCAAGAGAAAGGGTGTATTGGCTTGGGAGTAGAAGAAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CAA 90 bp CACTTAACCTTAGTCCTAATTCTAGGAGAACTAAGAGGGGCTGGGGCAGAAAGTCCGCAGATGAATTTATaGAGAAAGGGAGATCCTGTA +
Preference number: 5 (lower is better)
Translates to: HLTLVLILGELRGAGAESPQMNL*RKGDPV
Trigger: TACAGGATCTCCCTTTCTCAATAAATTCATCTGCGG...ACTTTCTGCCCCAGCCCCTCTTAGTTCTCCTAGAATTAGGACTAAGGTTAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp AGCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTCAGAGTATGGCTGCTTaGCATCTGATGACTTGGCCT +
Preference number: 5 (lower is better)
Translates to: SKECGHCLQQNVSGKTWIQSMAA*HLMTWP
Trigger: AGGCCAAGTCATCAGATGCAAAGCAGCCATACTCTG...AATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp TCCTCCAAGTTCTCACTGTTAGTAAGGTCAATTTGGGGGCAGAACAGGAACATGAAGAGTGTGATAACTTaGTCACCTGGTTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: SSKFSLLVRSIWGQNRNMKSVIT*SPGFTV
Trigger: CACAGTGAAACCAGGTGACAAAGTTATCACACTCTT...CATGTTCCTGTTCTGCCCCCAAATTGACCTTACTAACAGTGAGAACTTGGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp ATCAGTATACAGCTTCTGCAGCAGGGACGACCCTTCTTCTACTCCCAAGCCAATTTCTTAAATTTCTCCTaGTTGACATCCACTCCAATG +
Preference number: 5 (lower is better)
Translates to: ISIQLLQQGRPFFYSQANFLNFS*LTSTPM
Trigger: CATTGGAGTGGATGTCAACAAGGAGAAATTTAAGAA...ATTGGCTTGGGAGTAGAAGAAGGGTCGTCCCTGCTGCAGAAGCTGTATACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237653.11
ENST00000394897.5
CDS-3UTR CAA 90 bp GGAAGCAGGCCCCTAAAGGGAAACACAGGATGCCCAACTCATAAGAATCAGACTTTCTTAAATTTCTCCTaGTTGACATCCACTCCAATG +
Preference number: 5 (lower is better)
Translates to: GSRPLKGNTGCPTHKNQTFLNFS*LTSTPM
Trigger: CATTGGAGTGGATGTCAACAAGGAGAAATTTAAGAA...AGTCTGATTCTTATGAGTTGGGCATCCTGTGTTTCCCTTTAGGGGCCTGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp TGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAGTCAGATCAAATGCCATTGAGTaGGTGAAATATCCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: WLGQKPDIGPLRSESEVRSNAIE*VKYPLG
Trigger: ACCCAAAGGATATTTCACCAACTCAATGGCATTTGA...TCTGACTTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
ENST00000512708.5
CDS-3UTR CAA 90 bp GAAAACTTGGATTTCCCAAGACCCGAAGACTCCTCCAAGTTCTCACTGTTAGTAGTTAGTAAGGTCAATTaGGGGGCAGAACAGGAACAT +
Preference number: 5 (lower is better)
Translates to: ENLDFPRPEDSSKFSLLVVSKVN*GAEQEH
Trigger: ATGTTCCTGTTCTGCCCCCAAATTGACCTTACTAAC...TACTAACAGTGAGAACTTGGAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS CCA 90 bp TGTAGAAAGTACAAAGGTACACAGGCGACTGGTAGATCAGAAGGCTaGGTCCTGAGCTTTCTCTGTAGTCTGGTAATTATTAAACAGGAA +
Preference number: 5 (lower is better)
Translates to: CRKYKGTQATGRSEG*VLSFLCSLVIIKQE
Trigger: TTCCTGTTTAATAATTACCAGACTACAGAGAAAGCTCAGGACCCAGCCTTCTGATCTACCAGTCGCCTGTGTACCTTTGTACTTTCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237653.11
CDS-3UTR CAA 90 bp TTACGTAAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCGAACTTCCTTTGCCTTaGGTGGGGCCACTTCTACCT +
Preference number: 5 (lower is better)
Translates to: LRKNNFDEMVRSEARYRSELPLP*VGPLLP
Trigger: AGGTAGAAGTGGCCCCACCAAAGGCAAAGGAAGTTC...GGACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTTACGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
CDS-3UTR CAA 90 bp TGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAGTCAGATTCTTAAATTTCTCCTaGTTGACATCCACTCCAATG +
Preference number: 5 (lower is better)
Translates to: WLGQKPDIGPLRSESEVRFLNFS*LTSTPM
Trigger: CATTGGAGTGGATGTCAACAAGGAGAAATTTAAGAA...TCTGACTTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
CDS-3UTR CAA 90 bp AAATGGTTAGGTCAGAAGCCAGATATAGGTCCACTGCGGAGTGAATCAGAAGTCTCAAATGCCATTGAGTaGGTGAAATATCCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: KWLGQKPDIGPLRSESEVSNAIE*VKYPLG
Trigger: ACCCAAAGGATATTTCACCAACTCAATGGCATTTGA...GACTTCTGATTCACTCCGCAGTGGACCTATATCTGGCTTCTGACCTAACCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
ENST00000512708.5
CDS-3UTR CAA 90 bp TACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTCCTCATGATATTCCATTTTTaGGTCTCCCAAGGTCATCCA +
Preference number: 5 (lower is better)
Translates to: YNKTFPGKLGFPKTRRLLMIFHF*VSQGHP
Trigger: TGGATGACCTTGGGAGACCAAAAAATGGAATATCAT...GAGGAGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp AGCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTGCGACTGCATCAATCTaGGCAACTGAGATTTCCTTT +
Preference number: 5 (lower is better)
Translates to: SKECGHCLQQNVSGKTWIATASI*ATEISF
Trigger: AAAGGAAATCTCAGTTGCCAAGATTGATGCAGTCGC...AATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp TTTGGGTCTTGCATGTATTACATTGTACTTAAAGTAACAGGATACAGCGGATACGAACCTGGAGTCACCTaGGCAGTATTGATTGCAGCA +
Preference number: 5 (lower is better)
Translates to: FGSCMYYIVLKVTGYSGYEPGVT*AVLIAA
Trigger: TGCTGCAATCAATACTGCCAAGGTGACTCCAGGTTC...GTATCCGCTGTATCCTGTTACTTTAAGTACAATGTAATACATGCAAGACCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394897.5
CDS-3UTR CAA 90 bp ATCAAGAGGAAGGGAAGGAAGTCATATCCCAAGAGGGCACTTAACCTTAGTCCTTTGGTGAAATATCCTTaGGGTCTTGCATGTATTACA +
Preference number: 5 (lower is better)
Translates to: IKRKGRKSYPKRALNLSPLVKYP*GLACIT
Trigger: TGTAATACATGCAAGACCCAAAGGATATTTCACCAA...AGGACTAAGGTTAAGTGCCCTCTTGGGATATGACTTCCTTCCCTTCCTCTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp TTTTGTTTCTTTAGAGTAAAATGGCAGAGTTTCATGTCTAGGCCTGTGAGAGAGAGGAACCGAGCTTTATaGGAGCAAAGAGTGTGGACA +
Preference number: 5 (lower is better)
Translates to: FCFFRVKWQSFMSRPVRERNRAL*EQRVWT
Trigger: TGTCCACACTCTTTGCTCCAATAAAGCTCGGTTCCT...CTCTCTCACAGGCCTAGACATGAAACTCTGCCATTTTACTCTAAAGAAACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp TCTGCAACTAGGAAGGGAACTCTTGTGTGTATGAGGGTTGGTAATAGGCTCTTTTTAAATTTCTCCTTGTaGACATCCACTCCAATGATC +
Preference number: 5 (lower is better)
Translates to: SATRKGTLVCMRVGNRLFLNFSL*TSTPMI
Trigger: GATCATTGGAGTGGATGTCAACAAGGAGAAATTTAA...AAAGAGCCTATTACCAACCCTCATACACACAAGAGTTCCCTTCCTAGTTGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp CTCAGTAGCACCCAATTCCTGTGCCTTCTTAAATTTCTCCTTGTTGACATCCACTTAAATTTCTCCTTGTaGACATCCACTCCAATGATC +
Preference number: 5 (lower is better)
Translates to: LSSTQFLCLLKFLLVDIHLNFSL*TSTPMI
Trigger: GATCATTGGAGTGGATGTCAACAAGGAGAAATTTAA...GTGGATGTCAACAAGGAGAAATTTAAGAAGGCACAGGAATTGGGTGCTACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507484.5
CDS-3UTR CAA 90 bp TGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTATGATATTCCATTTTTaGGTCTCCCAAGGTCATCCA +
Preference number: 5 (lower is better)
Translates to: CLQQNVSGKTWISQDPKTMIFHF*VSQGHP
Trigger: TGGATGACCTTGGGAGACCAAAAAATGGAATATCAT...AGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS CCA 90 bp ATTTTCACTCCAGAGGATTACATACCAGAACGTCCAGATTTCCAATaGCCTCAAAGCAGAAGTCTATACCAGCATCTGTCATATCAAATA +
Preference number: 5 (lower is better)
Translates to: IFTPEDYIPERPDFQ*PQSRSLYQHLSYQI
Trigger: TATTTGATATGACAGATGCTGGTATAGACTTCTGCTTTGAGGCCATTGGAAATCTGGACGTTCTGGTATGTAATCCTCTGGAGTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504257.1
CDS-3UTR CAA 90 bp AGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGTTAAATTTCTCCTTGTaGACATCCACTCCAATGATC +
Preference number: 5 (lower is better)
Translates to: SVDTVYNKTFPGKLGFPKLNFSL*TSTPMI
Trigger: GATCATTGGAGTGGATGTCAACAAGGAGAAATTTAA...CTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp TGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTCCCAAGACCCGAAGACTTTCTTAAATTTCTCCTaGTTGACATCCACTCCAATG +
Preference number: 5 (lower is better)
Translates to: CLQQNVSGKTWISQDPKTFLNFS*LTSTPM
Trigger: CATTGGAGTGGATGTCAACAAGGAGAAATTTAAGAA...AGTCTTCGGGTCTTGGGAAATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp AGCAAAGAGTGTGGACACTGTTTACAACAAAACGTTTCCGGGAAAACTTGGATTTCAAATGCCATTGAGTaGGTGAAATATCCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: SKECGHCLQQNVSGKTWISNAIE*VKYPLG
Trigger: ACCCAAAGGATATTTCACCAACTCAATGGCATTTGA...AATCCAAGTTTTCCCGGAAACGTTTTGTTGTAAACAGTGTCCACACTCTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000394899.6
CDS-3UTR CAA 90 bp TTTGGGTCTTGCATGTATTACATTGTACTTAAAGTAACAGGATACAGCGGATACTCAAATGCCATTGAGTaGGTGAAATATCCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: FGSCMYYIVLKVTGYSGYSNAIE*VKYPLG
Trigger: ACCCAAAGGATATTTCACCAACTCAATGGCATTTGA...GTATCCGCTGTATCCTGTTACTTTAAGTACAATGTAATACATGCAAGACCCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394897.5
ENST00000507484.5
ENST00000512708.5
CDS-3UTR CAA 90 bp TACGTAAGAACAATTTTGATGAAATGGTTAGGTCAGAAGCCAGATATAGGTCCATTGGTGAAATATCCTTaGGGTCTTGCATGTATTACA +
Preference number: 5 (lower is better)
Translates to: YVRTILMKWLGQKPDIGPLVKYP*GLACIT
Trigger: TGTAATACATGCAAGACCCAAAGGATATTTCACCAA...TGGACCTATATCTGGCTTCTGACCTAACCATTTCATCAAAATTGTTCTTACGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
ENST00000512708.5
CDS-3UTR CAA 90 bp AACAGGATACAGCGGATACATTTTCCAGTTTTCATTAATTCAACTGCTTCATTGTTGGTGAAATATCCTTaGGGTCTTGCATGTATTACA +
Preference number: 5 (lower is better)
Translates to: NRIQRIHFPVFINSTASLLVKYP*GLACIT
Trigger: TGTAATACATGCAAGACCCAAAGGATATTTCACCAA...CAATGAAGCAGTTGAATTAATGAAAACTGGAAAATGTATCCGCTGTATCCTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507484.5
ENST00000512708.5
CDS CCA 72 bp TCTCAACGATTCCAGCCCCTTCATGGCCCAAGATGGTaGGATACAAGAGGTCCAAGTGTTTACTCCCCAACA +
Preference number: 6 (lower is better)
Translates to: SQRFQPLHGPRW*DTRGPSVYSPT
Trigger: TGTTGGGGAGTAAACACTTGGACCTCTTGTATCCCACCATCTTGGGCCATGAAGGGGCTGGAATCGTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237653.11
ENST00000394897.5
ENST00000394899.6
ENST00000508558.1
CDS CCA 72 bp TACTCTCAACGATTCCAGCCCCTTCATGGCCCAAGATaGTGGGATACAAGAGGTCCAAGTGTTTACTCCCCA +
Preference number: 6 (lower is better)
Translates to: YSQRFQPLHGPR*WDTRGPSVYSP
Trigger: TGGGGAGTAAACACTTGGACCTCTTGTATCCCACCATCTTGGGCCATGAAGGGGCTGGAATCGTTGAGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237653.11
ENST00000394897.5
ENST00000394899.6
ENST00000508558.1
CDS CAA 72 bp GAAAATGGTGCACCAGGCTTCCAGAGTATGGCTGCTTaGCATCTGATGACTTGGCCTGTAGTACTCATGCTG +
Preference number: 6 (lower is better)
Translates to: ENGAPGFQSMAA*HLMTWPVVLML
Trigger: CAGCATGAGTACTACAGGCCAAGTCATCAGATGCAAAGCAGCCATACTCTGGAAGCCTGGTGCACCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000237653.11
ENST00000394897.5
ENST00000394899.6
ENST00000507484.5
ENST00000508558.1
ENST00000513262.1
CDS CCA 72 bp TGTCTGCTCTTCCAGCCAGAACGTCCAGATTTCCAATaGCCTCAAAGCAGAAGTCTATACCAGCATCTGTCA +
Preference number: 6 (lower is better)
Translates to: CLLFQPERPDFQ*PQSRSLYQHLS
Trigger: TGACAGATGCTGGTATAGACTTCTGCTTTGAGGCCATTGGAAATCTGGACGTTCTGGCTGGAAGAGCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394897.5
ENST00000512708.5
CDS CCA 72 bp CCAGAGGATTACATACCAGAACGTCCAGATTTCCAATaGCCTCAAAGCAGAAGTCTATACCAGCATCTGTCA +
Preference number: 6 (lower is better)
Translates to: PEDYIPERPDFQ*PQSRSLYQHLS
Trigger: TGACAGATGCTGGTATAGACTTCTGCTTTGAGGCCATTGGAAATCTGGACGTTCTGGTATGTAATCCTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504257.1
CDS CAA 72 bp GGTAGAACCTGGAGTCACTTGAATTGTATACAAAAATaGCCCTCAGAATTCAGGCAAGAGGTACATTCTCCA +
Preference number: 6 (lower is better)
Translates to: GRTWSHLNCIQK*PSEFRQEVHSP
Trigger: TGGAGAATGTACCTCTTGCCTGAATTCTGAGGGCAATTTTTGTATACAATTCAAGTGACTCCAGGTTCTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507484.5