RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADH4 (Homo sapiens)

Ensembl gene IDs: ENSG00000198099

Ensembl transcript IDs: ENST00000265512.12, ENST00000503944.5, ENST00000504125.1, ENST00000504581.1, ENST00000504894.1, ENST00000505590.5, ENST00000506705.5, ENST00000508393.5, ENST00000509471.5, ENST00000512499.5, ENST00000629236.2

Found 271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATCCATTAGCTATTCTTCCTGATGCTCTCTCTCTGCCGACTCCCTaGCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCC +
Preference number: 1 (lower is better)
Translates to: HPLAILPDALSLPTP*PQQAPVCVVPHHVS
Trigger: GGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCATCAGGAAGAATAGCTAATGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
3UTR TCA 90 bp AATAGTCAATCCTTTGCTACCAGCAGCTACTCCAATGAAAGTACATaGTCCCCAGCCTGCGGTTGTACAGTCCAGGGCTGCTTTCATGGT +
Preference number: 1 (lower is better)
Translates to: NSQSFATSSYSNEST*SPACGCTVQGCFHG
Trigger: ACCATGAAAGCAGCCCTGGACTGTACAACCGCAGGCTGGGGATCATGTACTTTCATTGGAGTAGCTGCTGGTAGCAAAGGATTGACTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
3UTR GCA 90 bp AAATGCCTCACTGATTTTGTCAAAAGGCAGGGTATGGGTCACCAGTaGATCCAGATTGAATTTCTTATTCTTATAGTCAGTGACCAGCTT +
Preference number: 1 (lower is better)
Translates to: KCLTDFVKRQGMGHQ*IQIEFLILIVSDQL
Trigger: AAGCTGGTCACTGACTATAAGAATAAGAAATTCAATCTGGATGCACTGGTGACCCATACCCTGCCTTTTGACAAAATCAGTGAGGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506705.5
ENST00000509471.5
3UTR CCA 90 bp TGCATCCAGATTGAATTTCTTATTCTTATAGTCAGTGACCAGCTTTaGGATAGAATCTACACTTTTCCAACCACCAAAGAATGTTCCATT +
Preference number: 1 (lower is better)
Translates to: CIQIEFLILIVSDQL*DRIYTFPTTKECSI
Trigger: AATGGAACATTCTTTGGTGGTTGGAAAAGTGTAGATTCTATCCCAAAGCTGGTCACTGACTATAAGAATAAGAAATTCAATCTGGATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
3UTR-3UTR GCA 90 bp TGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTACTGATGCTCTCTCTCTaGCGACTCCCTGCCCTCAAC +
Preference number: 2 (lower is better)
Translates to: CFAAQIISSPRYEAQHPLLMLSL*RLPALN
Trigger: GTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCATCAG...TAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
3UTR-3UTR GCA 90 bp CCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCACAGAGAGGTAGCAGCAAAGGGGCTTGCCTaGTTCCCAGGCGATGGCTGC +
Preference number: 2 (lower is better)
Translates to: PSNLESITVASVWHREVAAKGLA*FPGDGC
Trigger: GCAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGC...TGCTACCTCTCTGTGCCATACTGATGCCACTGTTATCGATTCTAAATTTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
3UTR-3UTR CCA 90 bp CATGATCCCCAGCCTGCGGTTGTACAGTCCAGGGCTGCTTTCATGGTTTCAGATGACGTTGGTCACTCCTaGCCCAATACTTTCCACAAT +
Preference number: 2 (lower is better)
Translates to: HDPQPAVVQSRAAFMVSDDVGHS*PNTFHN
Trigger: ATTGTGGAAAGTATTGGGCCAGGAGTGACCAACGTC...ATCTGAAACCATGAAAGCAGCCCTGGACTGTACAACCGCAGGCTGGGGATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
3UTR-3UTR GCA 90 bp CTACCAGCAGCTACTCCAATGAAAGTACATGATCCCCAGCCTGCGGTTGTACAGGGTTTCAGATCCACCTaGACAGTCAAGGGCAAAATC +
Preference number: 2 (lower is better)
Translates to: LPAATPMKVHDPQPAVVQGFRST*TVKGKI
Trigger: GATTTTGCCCTTGACTGTGCAGGTGGATCTGAAACC...CTGTACAACCGCAGGCTGGGGATCATGTACTTTCATTGGAGTAGCTGCTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506705.5
3UTR-3UTR CCA 90 bp CTACCAGCAGCTACTCCAATGAAAGTACATGATCCCCAGCCTGCGGTTGTACAGACAGTGGCATCAGTATaGCACAGAGAGGTAGCAATG +
Preference number: 2 (lower is better)
Translates to: LPAATPMKVHDPQPAVVQTVASV*HREVAM
Trigger: CATTGCTACCTCTCTGTGCCATACTGATGCCACTGT...CTGTACAACCGCAGGCTGGGGATCATGTACTTTCATTGGAGTAGCTGCTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
3UTR-3UTR GCA 90 bp TTGCTGTTGACTATAGTCTCCCTGTTGTGCTATCAAATACCAGGTCTTATTCATCTGATGCTCTCTCTCTaGCGACTCCCTGCCCTCAAC +
Preference number: 2 (lower is better)
Translates to: LLLTIVSLLCYQIPGLIHLMLSL*RLPALN
Trigger: GTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCATCAG...ATGAATAAGACCTGGTATTTGATAGCACAACAGGGAGACTATAGTCAACAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
3UTR-3UTR CCA 90 bp TGCTTTCATGGTTTCAGATCCACCTGCACAGTCAAGGGCAAAATCCACACCTCCAATTACTTTGTCACCTaGTTTGACGTTGGTCACTCC +
Preference number: 2 (lower is better)
Translates to: CFHGFRSTCTVKGKIHTSNYFVT*FDVGHS
Trigger: GGAGTGACCAACGTCAAACCAGGTGACAAAGTAATT...GGAGGTGTGGATTTTGCCCTTGACTGTGCAGGTGGATCTGAAACCATGAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
3UTR CAA 90 bp CGGACGCTTTTTCCTTGGTTCATTAGGTCAAATGCCTCACTGATTTaGTCAAAAGGCAGGGTATGGGTCACCAGTGCATCCAGATTGAAT +
Preference number: 2 (lower is better)
Translates to: RTLFPWFIRSNASLI*SKGRVWVTSASRLN
Trigger: ATTCAATCTGGATGCACTGGTGACCCATACCCTGCCTTTTGACAAAATCAGTGAGGCATTTGACCTAATGAACCAAGGAAAAAGCGTCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509471.5
3UTR-3UTR GCA 90 bp AGGCCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCACAGAGAGGTACTTCAACCTCTTCAATaGAAAGGGGCTTGCCTGCTT +
Preference number: 2 (lower is better)
Translates to: RPSNLESITVASVWHREVLQPLQ*KGACLL
Trigger: AAGCAGGCAAGCCCCTTTGCATTGAAGAGGTTGAAG...TACCTCTCTGTGCCATACTGATGCCACTGTTATCGATTCTAAATTTGAGGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
3UTR-3UTR GCA 90 bp CATGGTTTCAGATCCACCTGCACAGTCAAGGGCAAAATCCACACCTCCCTTGGTGACTCAGACAAAACTTaGATTTTCTACATAGAGGTG +
Preference number: 2 (lower is better)
Translates to: HGFRSTCTVKGKIHTSLGDSDKT*IFYIEV
Trigger: CACCTCTATGTAGAAAATGCAAGTTTTGTCTGAGTC...ACCAAGGGAGGTGTGGATTTTGCCCTTGACTGTGCAGGTGGATCTGAAACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506705.5
3UTR-3UTR CCA 90 bp CATGGTTTCAGATCCACCTGCACAGTCAAGGGCAAAATCCACACCTCCCTTGGTACACAAATTTGTGAGTaGACTCAGACAAAACTTGCA +
Preference number: 2 (lower is better)
Translates to: HGFRSTCTVKGKIHTSLGTQICE*TQTKLA
Trigger: TGCAAGTTTTGTCTGAGTCCACTCACAAATTTGTGT...ACCAAGGGAGGTGTGGATTTTGCCCTTGACTGTGCAGGTGGATCTGAAACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506705.5
3UTR CAA 90 bp ATAGTACGGCCGATTATTAGCTCCTCTGGAAAAATAGTCAATCCTTaGCTACCAGCAGCTACTCCAATGAAAGTACATGATCCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: IVRPIISSSGKIVNP*LPAATPMKVHDPQP
Trigger: AGGCTGGGGATCATGTACTTTCATTGGAGTAGCTGCTGGTAGCAAAGGATTGACTATTTTTCCAGAGGAGCTAATAATCGGCCGTACTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506705.5
3UTR-3UTR GCA 90 bp TTGCTGTTGACTATAGTCTCCCTGTTGTGCTATCAAATACCAGGTCTTATTCATAAACATGTACCATGGTaGTTTGCTGCACAGATCATC +
Preference number: 2 (lower is better)
Translates to: LLLTIVSLLCYQIPGLIHKHVPW*FAAQII
Trigger: GATGATCTGTGCAGCAAAGCACCATGGTACATGTTT...ATGAATAAGACCTGGTATTTGATAGCACAACAGGGAGACTATAGTCAACAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
3UTR TCA 72 bp TCCTTTGCTACCAGCAGCTACTCCAATGAAAGTACATaGTCCCCAGCCTGCGGTTGTACAGTCCAGGGCTGC +
Preference number: 3 (lower is better)
Translates to: SFATSSYSNEST*SPACGCTVQGC
Trigger: GCAGCCCTGGACTGTACAACCGCAGGCTGGGGATCATGTACTTTCATTGGAGTAGCTGCTGGTAGCAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
3UTR-3UTR CAA 90 bp CATGATCCCCAGCCTGCGGTTGTACAGTCCAGGGCTGCTTTCATGGTTTCAGATTCACCTGGTTTGACGTaGGTCACTCCTGGCCCAATA +
Preference number: 3 (lower is better)
Translates to: HDPQPAVVQSRAAFMVSDSPGLT*VTPGPI
Trigger: TATTGGGCCAGGAGTGACCAACGTCAAACCAGGTGA...ATCTGAAACCATGAAAGCAGCCCTGGACTGTACAACCGCAGGCTGGGGATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
3UTR-3UTR CAA 90 bp CATGGTTTCAGATCCACCTGCACAGTCAAGGGCAAAATCCACACCTCCCTTGGTTCTATTTTGGCAAGATaGATATCTGACACCACAGTG +
Preference number: 3 (lower is better)
Translates to: HGFRSTCTVKGKIHTSLGSILAR*ISDTTV
Trigger: CACTGTGGTGTCAGATATCAATCTTGCCAAAATAGA...ACCAAGGGAGGTGTGGATTTTGCCCTTGACTGTGCAGGTGGATCTGAAACCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506705.5
3UTR GCA 72 bp GTGCAGGTTTGTTACATAGGTAAACATGTACCATGGTaGTTTGCTGCACAGATCATCTCATCACCCAGGTAT +
Preference number: 3 (lower is better)
Translates to: VQVCYIGKHVPW*FAAQIISSPRY
Trigger: ATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCACCATGGTACATGTTTACCTATGTAACAAACCTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
3UTR-3UTR CAA 90 bp CCAAAGAATGTTCCATTTATAGTACGGCCGATTATTAGCTCCTCTGGAAAAATAACTTTGTCACCTGGTTaGACGTTGGTCACTCCTGGC +
Preference number: 3 (lower is better)
Translates to: PKNVPFIVRPIISSSGKITLSPG*TLVTPG
Trigger: GCCAGGAGTGACCAACGTCAAACCAGGTGACAAAGT...TATTTTTCCAGAGGAGCTAATAATCGGCCGTACTATAAATGGAACATTCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506705.5
3UTR GCA 72 bp ACTGATTTTGTCAAAAGGCAGGGTATGGGTCACCAGTaGATCCAGATTGAATTTCTTATTCTTATAGTCAGT +
Preference number: 3 (lower is better)
Translates to: TDFVKRQGMGHQ*IQIEFLILIVS
Trigger: ACTGACTATAAGAATAAGAAATTCAATCTGGATGCACTGGTGACCCATACCCTGCCTTTTGACAAAATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506705.5
ENST00000509471.5
3UTR CCA 72 bp ATTGAATTTCTTATTCTTATAGTCAGTGACCAGCTTTaGGATAGAATCTACACTTTTCCAACCACCAAAGAA +
Preference number: 3 (lower is better)
Translates to: IEFLILIVSDQL*DRIYTFPTTKE
Trigger: TTCTTTGGTGGTTGGAAAAGTGTAGATTCTATCCCAAAGCTGGTCACTGACTATAAGAATAAGAAATTCAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR GCA 90 bp TACTTCAACCTCTTCAATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTGCGCAAAGGGGCTTGCCTaGTTCCCAGGCGATGGCTGC +
Preference number: 4 (lower is better)
Translates to: YFNLFNAKGLACFPGDGCAKGLA*FPGDGC
Trigger: GCAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGC...GCAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTGAAGAGGTTGAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS-3UTR TCA 90 bp CCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCAGCCCCATAGCCAGTTaGAAACCCACATCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: PTPCPQQAPVCVVPHHVSSPIAS*KPTSKQ
Trigger: CTGCTTGGATGTGGGTTTTCAACTGGCTATGGGGCT...GGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp CATGATCCCCAGCCTGCGGTTGTACAGTCCAGGGCTGCTTTCATGGTTTCAGATGCAAAGGGGCTTGCCTaGTTCCCAGGCGATGGCTGC +
Preference number: 4 (lower is better)
Translates to: HDPQPAVVQSRAAFMVSDAKGLA*FPGDGC
Trigger: GCAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGC...ATCTGAAACCATGAAAGCAGCCCTGGACTGTACAACCGCAGGCTGGGGATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR TCA 90 bp TGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTAGCCCCATAGCCAGTTaGAAACCCACATCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: CRLPALNRPQCVLFPIMCSPIAS*KPTSKQ
Trigger: CTGCTTGGATGTGGGTTTTCAACTGGCTATGGGGCT...ACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR TCA 90 bp CCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCCAGCAGCTACTCCAATaGAAGTACATGATCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PTPCPQQAPVCVVPHHVSQQLLQ*KYMIPS
Trigger: GCTGGGGATCATGTACTTTCATTGGAGTAGCTGCTG...GGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR TCA 90 bp GCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCGGTCAAATGCCTCACTaGTTTTGTCAAAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ALSLPTPCPQQAPVCVVPGQMPH*FCQKAG
Trigger: CCCTGCCTTTTGACAAAATCAGTGAGGCATTTGACC...GGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp TCAACCTCTTCAATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTGCTTTGCAATGCAAAGGGGCTTaGCTGCTTCCCAGGCGATGG +
Preference number: 4 (lower is better)
Translates to: STSSMQRGLPASQAMAALQCKGA*LLPRRW
Trigger: CCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTG...CAAAGCAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTGAAGAGGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS-3UTR GCA 90 bp GCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCTTCAACCTCTTCAATaGAAAGGGGCTTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: ALSLPTPCPQQAPVCVVPLQPLQ*KGACLL
Trigger: AAGCAGGCAAGCCCCTTTGCATTGAAGAGGTTGAAG...GGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp GCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCACAGTGGCATCAGTATaGCACAGAGAGGTAGCAATG +
Preference number: 4 (lower is better)
Translates to: ALSLPTPCPQQAPVCVVPTVASV*HREVAM
Trigger: CATTGCTACCTCTCTGTGCCATACTGATGCCACTGT...GGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR TCA 90 bp CTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCCTTTGTCACCTGGTTTaGCGTTGGTCACTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LPSTGPSVCCSPSCVHVFLCHLV*RWSLLA
Trigger: GGCCAGGAGTGACCAACGTCAAACCAGGTGACAAAG...GAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR TCA 90 bp GCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCGGCATCTTCAAAAGATaGGGATTGTTCGGACGCTTT +
Preference number: 4 (lower is better)
Translates to: ALSLPTPCPQQAPVCVVPGIFKR*GLFGRF
Trigger: AAAGCGTCCGAACAATCCTCATCTTTTGAAGATGCC...GGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265512.12
ENST00000508393.5
CDS-3UTR GCA 90 bp CATGATCCCCAGCCTGCGGTTGTACAGTCCAGGGCTGCTTTCATGGTTTCAGATCAATGCAAAGGGGCTTaGCTGCTTCCCAGGCGATGG +
Preference number: 4 (lower is better)
Translates to: HDPQPAVVQSRAAFMVSDQCKGA*LLPRRW
Trigger: CCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTG...ATCTGAAACCATGAAAGCAGCCCTGGACTGTACAACCGCAGGCTGGGGATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR GCA 90 bp CCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCCTTCAACCTCTTCAATaGAAAGGGGCTTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: PTPCPQQAPVCVVPHHVSLQPLQ*KGACLL
Trigger: AAGCAGGCAAGCCCCTTTGCATTGAAGAGGTTGAAG...GGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp CCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCGGTTTCAGATCCACCTaGACAGTCAAGGGCAAAATC +
Preference number: 4 (lower is better)
Translates to: PTPCPQQAPVCVVPHHVSGFRST*TVKGKI
Trigger: GATTTTGCCCTTGACTGTGCAGGTGGATCTGAAACC...GGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp CCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCACAGTGGCATCAGTATaGCACAGAGAGGTAGCAATG +
Preference number: 4 (lower is better)
Translates to: PTPCPQQAPVCVVPHHVSTVASV*HREVAM
Trigger: CATTGCTACCTCTCTGTGCCATACTGATGCCACTGT...GGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp GACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATCCAGGGCTGCTTTCATaGTTTCAGATCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: DSLPSTGPSVCCSPSCVHPGLLS*FQIHLH
Trigger: GTGCAGGTGGATCTGAAACCATGAAAGCAGCCCTGG...ATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR TCA 90 bp GCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCAGCCCCATAGCCAGTTaGAAACCCACATCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: ALNRPQCVLFPIMCPCVLSPIAS*KPTSKQ
Trigger: CTGCTTGGATGTGGGTTTTCAACTGGCTATGGGGCT...GAGAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR TCA 90 bp GACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATTCCAATGAAAGTACATaGTCCCCAGCCTGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: DSLPSTGPSVCCSPSCVHSNEST*SPACGC
Trigger: ACAACCGCAGGCTGGGGATCATGTACTTTCATTGGA...ATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR TCA 90 bp ATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCGGTCAAATGCCTCACTaGTTTTGTCAAAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: MLSLCRLPALNRPQCVLFGQMPH*FCQKAG
Trigger: CCCTGCCTTTTGACAAAATCAGTGAGGCATTTGACC...GAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR TCA 90 bp CTATTCTTCCTGATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGGGTCAAATGCCTCACTaGTTTTGTCAAAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LFFLMLSLCRLPALNRPQGQMPH*FCQKAG
Trigger: CCCTGCCTTTTGACAAAATCAGTGAGGCATTTGACC...CTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCATCAGGAAGAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp TGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTAGCAAAGGGGCTTGCCTaGTTCCCAGGCGATGGCTGC +
Preference number: 4 (lower is better)
Translates to: CFAAQIISSPRYEAQHPLAKGLA*FPGDGC
Trigger: GCAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGC...TAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp CCATGGTGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCAATGCAAAGGGGCTTaGCTGCTTCCCAGGCGATGG +
Preference number: 4 (lower is better)
Translates to: PWCFAAQIISSPRYEAQHQCKGA*LLPRRW
Trigger: CCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTG...ATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCACCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp TACCATGGTGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCCAATGCAAAGGGGCTTaGCTGCTTCCCAGGCGATGG +
Preference number: 4 (lower is better)
Translates to: YHGALLHRSSHHPGMKPSQCKGA*LLPRRW
Trigger: CCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTG...GCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCACCATGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp ATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCTTCAACCTCTTCAATaGAAAGGGGCTTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: MLSLCRLPALNRPQCVLFLQPLQ*KGACLL
Trigger: AAGCAGGCAAGCCCCTTTGCATTGAAGAGGTTGAAG...GAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp CTATTCTTCCTGATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTACAGTCCAGGGCTaGTTTCATGGTTTCAGATCC +
Preference number: 4 (lower is better)
Translates to: LFFLMLSLCRLPALNRPQCTVQG*FHGFRS
Trigger: GGATCTGAAACCATGAAAGCAGCCCTGGACTGTACA...CTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCATCAGGAAGAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp CCATGGTGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCTGATGCTCTCTCTCTaGCGACTCCCTGCCCTCAAC +
Preference number: 4 (lower is better)
Translates to: PWCFAAQIISSPRYEAQHLMLSL*RLPALN
Trigger: GTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCATCAG...ATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCACCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp TACCATGGTGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCCTGATGCTCTCTCTCTaGCGACTCCCTGCCCTCAAC +
Preference number: 4 (lower is better)
Translates to: YHGALLHRSSHHPGMKPSLMLSL*RLPALN
Trigger: GTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCATCAG...GCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCACCATGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp CTATTCTTCCTGATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGACCATGGTGCTTTGCTaGACAGATCATCTCATCACC +
Preference number: 4 (lower is better)
Translates to: LFFLMLSLCRLPALNRPQTMVLC*TDHLIT
Trigger: GGTGATGAGATGATCTGTGCAGCAAAGCACCATGGT...CTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCATCAGGAAGAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp TCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTACCATGGTGCTTTGCTaGACAGATCATCTCATCACC +
Preference number: 4 (lower is better)
Translates to: SADSLPSTGPSVCCSPSCTMVLC*TDHLIT
Trigger: GGTGATGAGATGATCTGTGCAGCAAAGCACCATGGT...ACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp CCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCTTCCCAGGCGATGGCTaGTTTGCATTTAATAACCTG +
Preference number: 4 (lower is better)
Translates to: PTPCPQQAPVCVVPHHVSFPGDG*FAFNNL
Trigger: CAGGTTATTAAATGCAAAGCAGCCATCGCCTGGGAA...GGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508393.5
CDS-3UTR CCA 90 bp CTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCCCAGGGCTGCTTTCATaGTTTCAGATCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: LPSTGPSVCCSPSCVHVFPGLLS*FQIHLH
Trigger: GTGCAGGTGGATCTGAAACCATGAAAGCAGCCCTGG...GAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp TACTTCAACCTCTTCAATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTGCGCCCTGCTTTGCCCTTaGTGCCCATTTTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: YFNLFNAKGLACFPGDGCALLCP*CPFFFG
Trigger: CCCAAAGAAAAATGGGCACCAAGGGCAAAGCAGGGC...GCAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTGAAGAGGTTGAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504894.1
CDS-3UTR TCA 90 bp CATGGTTTCAGATCCACCTGCACAGTCAAGGGCAAAATCCACACCTCCCTTGGTCTTTGTCACCTGGTTTaGCGTTGGTCACTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: HGFRSTCTVKGKIHTSLGLCHLV*RWSLLA
Trigger: GGCCAGGAGTGACCAACGTCAAACCAGGTGACAAAG...ACCAAGGGAGGTGTGGATTTTGCCCTTGACTGTGCAGGTGGATCTGAAACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR TCA 90 bp GCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCTCCAATGAAAGTACATaGTCCCCAGCCTGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: ALNRPQCVLFPIMCPCVLSNEST*SPACGC
Trigger: ACAACCGCAGGCTGGGGATCATGTACTTTCATTGGA...GAGAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR TCA 90 bp ATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCGGCATCTTCAAAAGATaGGGATTGTTCGGACGCTTT +
Preference number: 4 (lower is better)
Translates to: MLSLCRLPALNRPQCVLFGIFKR*GLFGRF
Trigger: AAAGCGTCCGAACAATCCTCATCTTTTGAAGATGCC...GAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265512.12
ENST00000508393.5
CDS-3UTR CCA 90 bp GCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCGTCAGTGACCAGCTTTaGGATAGAATCTACACTTTT +
Preference number: 4 (lower is better)
Translates to: ALSLPTPCPQQAPVCVVPVSDQL*DRIYTF
Trigger: AAAAGTGTAGATTCTATCCCAAAGCTGGTCACTGAC...GGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp CTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCAAAAGGCAGGGTATaGGTCACCAGTGCATCCAGA +
Preference number: 4 (lower is better)
Translates to: LPSTGPSVCCSPSCVHVFSKGRV*VTSASR
Trigger: TCTGGATGCACTGGTGACCCATACCCTGCCTTTTGA...GAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp TCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGGTAAACATGTACCATaGTGCTTTGCTGCACAGATC +
Preference number: 4 (lower is better)
Translates to: SADSLPSTGPSVCCSPSCGKHVP*CFAAQI
Trigger: GATCTGTGCAGCAAAGCACCATGGTACATGTTTACC...ACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp CCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCTTCCCAGGCGATGGCTaGTTTGCATTTAATAACTTT +
Preference number: 4 (lower is better)
Translates to: PTPCPQQAPVCVVPHHVSFPGDG*FAFNNF
Trigger: AAAGTTATTAAATGCAAAGCAGCCATCGCCTGGGAA...GGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265512.12
ENST00000629236.2
CDS-3UTR GCA 90 bp AACCTCTTCAATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTGCTTTGCACTTCAACCTCTTCAATaGAAAGGGGCTTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: NLFNAKGLACFPGDGCFALQPLQ*KGACLL
Trigger: AAGCAGGCAAGCCCCTTTGCATTGAAGAGGTTGAAG...TGCAAAGCAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTGAAGAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS-3UTR GCA 90 bp GCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCACTTTCCACAATACCTaGAGCCTCATGGCCAACGAT +
Preference number: 4 (lower is better)
Translates to: ALNRPQCVLFPIMCPCVLTFHNT*SLMAND
Trigger: ATCGTTGGCCATGAGGCTGCAGGTATTGTGGAAAGT...GAGAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp CTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTGTACAGTCCAGGGCTaGTTTCATGGTTTCAGATCC +
Preference number: 4 (lower is better)
Translates to: LPSTGPSVCCSPSCVHVFCTVQG*FHGFRS
Trigger: GGATCTGAAACCATGAAAGCAGCCCTGGACTGTACA...GAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp TACTTCAACCTCTTCAATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTGCACAGTGGCATCAGTATaGCACAGAGAGGTAGCAATG +
Preference number: 4 (lower is better)
Translates to: YFNLFNAKGLACFPGDGCTVASV*HREVAM
Trigger: CATTGCTACCTCTCTGTGCCATACTGATGCCACTGT...GCAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTGAAGAGGTTGAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS-3UTR CCA 90 bp CATGATCCCCAGCCTGCGGTTGTACAGTCCAGGGCTGCTTTCATGGTTTCAGATATACCTGCAGCCTCATaGCCAACGATCACTGGGAAA +
Preference number: 4 (lower is better)
Translates to: HDPQPAVVQSRAAFMVSDIPAAS*PTITGK
Trigger: TTTCCCAGTGATCGTTGGCCATGAGGCTGCAGGTAT...ATCTGAAACCATGAAAGCAGCCCTGGACTGTACAACCGCAGGCTGGGGATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CCA 90 bp ATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCAATTACTTTGTCACCTaGTTTGACGTTGGTCACTCC +
Preference number: 4 (lower is better)
Translates to: MLSLCRLPALNRPQCVLFNYFVT*FDVGHS
Trigger: GGAGTGACCAACGTCAAACCAGGTGACAAAGTAATT...GAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp TACCATGGTGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCCCAGGGCTGCTTTCATaGTTTCAGATCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: YHGALLHRSSHHPGMKPSPGLLS*FQIHLH
Trigger: GTGCAGGTGGATCTGAAACCATGAAAGCAGCCCTGG...GCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCACCATGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp CATGATCCCCAGCCTGCGGTTGTACAGTCCAGGGCTGCTTTCATGGTTTCAGATTCAAAAGGCAGGGTATaGGTCACCAGTGCATCCAGA +
Preference number: 4 (lower is better)
Translates to: HDPQPAVVQSRAAFMVSDSKGRV*VTSASR
Trigger: TCTGGATGCACTGGTGACCCATACCCTGCCTTTTGA...ATCTGAAACCATGAAAGCAGCCCTGGACTGTACAACCGCAGGCTGGGGATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR TCA 90 bp TGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTACTTTGTCACCTGGTTTaGCGTTGGTCACTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: CFAAQIISSPRYEAQHPLLCHLV*RWSLLA
Trigger: GGCCAGGAGTGACCAACGTCAAACCAGGTGACAAAG...TAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR TCA 90 bp GACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATTCCCACACAAATTTGTaGGTGGACTCAGACAAAACT +
Preference number: 4 (lower is better)
Translates to: DSLPSTGPSVCCSPSCVHSHTNL*VDSDKT
Trigger: AGTTTTGTCTGAGTCCACTCACAAATTTGTGTGGGA...ATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR TCA 90 bp ATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCTCTTCCATTAGTTGTTaGTCACTAGCAGGACTTTTG +
Preference number: 4 (lower is better)
Translates to: MLSLCRLPALNRPQCVLFSSISC*SLAGLL
Trigger: CAAAAGTCCTGCTAGTGATCAACAACTAATGGAAGA...GAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR TCA 90 bp TACCATGGTGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCCAGCAGCTACTCCAATaGAAGTACATGATCCCCAGC +
Preference number: 4 (lower is better)
Translates to: YHGALLHRSSHHPGMKPSQQLLQ*KYMIPS
Trigger: GCTGGGGATCATGTACTTTCATTGGAGTAGCTGCTG...GCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCACCATGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR TCA 90 bp TCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTAATCAGATAGTATTCTaGATTGCTCCTGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: SADSLPSTGPSVCCSPSCNQIVF*IAPGIF
Trigger: GAAGATGCCAGGAGCAATTCAGAATACTATCTGATT...ACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265512.12
ENST00000508393.5
CDS-3UTR GCA 90 bp GCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTAGCTATTCTTCTGATGCTCTCTCTCTaGCGACTCCCTGCCCTCAAC +
Preference number: 4 (lower is better)
Translates to: AQIISSPRYEAQHPLAILLMLSL*RLPALN
Trigger: GTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCATCAG...AAGAATAGCTAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp CTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTGTACCATGGTGCTTTaGTGCACAGATCATCTCATC +
Preference number: 4 (lower is better)
Translates to: LPSTGPSVCCSPSCVHVFCTMVL*CTDHLI
Trigger: GATGAGATGATCTGTGCAGCAAAGCACCATGGTACA...GAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp TCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTATAGTCTCCCTGTTGTaGTATCAAATACCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SADSLPSTGPSVCCSPSCIVSLL*YQIPGL
Trigger: AAGACCTGGTATTTGATAGCACAACAGGGAGACTAT...ACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp TCAACCTCTTCAATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTGCTTTGCTGCTTTGCCCTTGGTaGCCATTTTTCTTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: STSSMQRGLPASQAMAALLLCPW*PFFFGK
Trigger: TTTCCCAAAGAAAAATGGGCACCAAGGGCAAAGCAG...CAAAGCAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTGAAGAGGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504894.1
CDS-3UTR CCA 90 bp TACCATGGTGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATACCTGCAGCCTCATaGCCAACGATCACTGGGAAA +
Preference number: 4 (lower is better)
Translates to: YHGALLHRSSHHPGMKPSIPAAS*PTITGK
Trigger: TTTCCCAGTGATCGTTGGCCATGAGGCTGCAGGTAT...GCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCACCATGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp CCATGGTGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATTCAAAAGGCAGGGTATaGGTCACCAGTGCATCCAGA +
Preference number: 4 (lower is better)
Translates to: PWCFAAQIISSPRYEAQHSKGRV*VTSASR
Trigger: TCTGGATGCACTGGTGACCCATACCCTGCCTTTTGA...ATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCACCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp CTATTCTTCCTGATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGATTCTGAATTGCTCCTaGCATCTTCAAAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: LFFLMLSLCRLPALNRPQILNCS*HLQKMR
Trigger: CCTCATCTTTTGAAGATGCCAGGAGCAATTCAGAAT...CTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCATCAGGAAGAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265512.12
ENST00000508393.5
CDS-3UTR TCA 90 bp GACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATCTATTTTGGCAAGATTaGTATCTGACACCACAGTGT +
Preference number: 4 (lower is better)
Translates to: DSLPSTGPSVCCSPSCVHLFWQD*YLTPQC
Trigger: ACACTGTGGTGTCAGATATCAATCTTGCCAAAATAG...ATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR TCA 90 bp TACCATGGTGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATTAGCTATTCTTCCTaGTGCTCTCTCTCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: YHGALLHRSSHHPGMKPSISYSS*CSLSAD
Trigger: GTCGGCAGAGAGAGAGCATCAGGAAGAATAGCTAAT...GCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCACCATGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp GTGCAGGTTTGTTACATAGGTAAACATGTACCATGGTGCTTTGCTGCACAGATCCAATGCAAAGGGGCTTaGCTGCTTCCCAGGCGATGG +
Preference number: 4 (lower is better)
Translates to: VQVCYIGKHVPWCFAAQIQCKGA*LLPRRW
Trigger: CCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTG...GATCTGTGCAGCAAAGCACCATGGTACATGTTTACCTATGTAACAAACCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp TACCATGGTGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCACTTTCCACAATACCTaGAGCCTCATGGCCAACGAT +
Preference number: 4 (lower is better)
Translates to: YHGALLHRSSHHPGMKPSTFHNT*SLMAND
Trigger: ATCGTTGGCCATGAGGCTGCAGGTATTGTGGAAAGT...GCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCACCATGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp TCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGACTCAGACAAAACTTaGATTTTCTACATAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SADSLPSTGPSVCCSPSCDSDKT*IFYIEV
Trigger: CACCTCTATGTAGAAAATGCAAGTTTTGTCTGAGTC...ACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp TACCATGGTGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCGGTTTCAGATCCACCTaGACAGTCAAGGGCAAAATC +
Preference number: 4 (lower is better)
Translates to: YHGALLHRSSHHPGMKPSGFRST*TVKGKI
Trigger: GATTTTGCCCTTGACTGTGCAGGTGGATCTGAAACC...GCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCACCATGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp CTACCAGCAGCTACTCCAATGAAAGTACATGATCCCCAGCCTGCGGTTGTACAGTGTACAGTCCAGGGCTaGTTTCATGGTTTCAGATCC +
Preference number: 4 (lower is better)
Translates to: LPAATPMKVHDPQPAVVQCTVQG*FHGFRS
Trigger: GGATCTGAAACCATGAAAGCAGCCCTGGACTGTACA...CTGTACAACCGCAGGCTGGGGATCATGTACTTTCATTGGAGTAGCTGCTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR GCA 90 bp CTACTTCAACCTCTTCAATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTGTTCCCAGGCGATGGCTaGTTTGCATTTAATAACCTT +
Preference number: 4 (lower is better)
Translates to: LLQPLQCKGACLLPRRWLFPGDG*FAFNNL
Trigger: AAGGTTATTAAATGCAAAGCAGCCATCGCCTGGGAA...CAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTGAAGAGGTTGAAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS-3UTR CCA 90 bp ATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCACACAAATTTGTGAGTaGACTCAGACAAAACTTGCA +
Preference number: 4 (lower is better)
Translates to: MLSLCRLPALNRPQCVLFTQICE*TQTKLA
Trigger: TGCAAGTTTTGTCTGAGTCCACTCACAAATTTGTGT...GAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp TGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTATTCTGAATTGCTCCTaGCATCTAAAGATGAGGATT +
Preference number: 4 (lower is better)
Translates to: CRLPALNRPQCVLFPIMCILNCS*HLKMRI
Trigger: AATCCTCATCTTTAGATGCCAGGAGCAATTCAGAAT...ACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629236.2
CDS-3UTR TCA 90 bp CTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCTTCCATTAGTTGTTaGTCACTAGCAGGACTTTTG +
Preference number: 4 (lower is better)
Translates to: LPSTGPSVCCSPSCVHVFSSISC*SLAGLL
Trigger: CAAAAGTCCTGCTAGTGATCAACAACTAATGGAAGA...GAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR TCA 90 bp CAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCATCATATTAGCTATTCTTCCTaGTGCTCTCTCTCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: QQAPVCVVPHHVSMCSHHISYSS*CSLSAD
Trigger: GTCGGCAGAGAGAGAGCATCAGGAAGAATAGCTAAT...ATGATGAGAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp CAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCATCATTGTACAGTCCAGGGCTaGTTTCATGGTTTCAGATCC +
Preference number: 4 (lower is better)
Translates to: QQAPVCVVPHHVSMCSHHCTVQG*FHGFRS
Trigger: GGATCTGAAACCATGAAAGCAGCCCTGGACTGTACA...ATGATGAGAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp GACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATCCTGAGTCAGATAATTaGTGGAGAATAGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: DSLPSTGPSVCCSPSCVHPESDN*WRIDVF
Trigger: AAACACATCTATTCTCCAGCAATTATCTGACTCAGG...ATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508393.5
CDS-3UTR GCA 90 bp GACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGATAGTATTCTGAATTaGTCCTGGCATCTAAAGATG +
Preference number: 4 (lower is better)
Translates to: DSLPSTGPSVCCSPSCVHDSILN*SWHLKM
Trigger: CATCTTTAGATGCCAGGAGCAATTCAGAATACTATC...ATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629236.2
CDS-3UTR CCA 90 bp AATCCTTTGCTACCAGCAGCTACTCCAATGAAAGTACATGATCCCCAGCCTGCGACAGTGGCATCAGTATaGCACAGAGAGGTAGCAATG +
Preference number: 4 (lower is better)
Translates to: NPLLPAATPMKVHDPQPATVASV*HREVAM
Trigger: CATTGCTACCTCTCTGTGCCATACTGATGCCACTGT...CGCAGGCTGGGGATCATGTACTTTCATTGGAGTAGCTGCTGGTAGCAAAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CCA 90 bp GCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCATCATTTAGCTATACCTGCAGCCTCATaGCCAACGATCACTGGGAAA +
Preference number: 4 (lower is better)
Translates to: APVCVVPHHVSMCSHHLAIPAAS*PTITGK
Trigger: TTTCCCAGTGATCGTTGGCCATGAGGCTGCAGGTAT...AGCTAAATGATGAGAACACATGGACACATGATGGGGAACAACACACACTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp CAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCATCATGACGTTGGTCACTCCTaGCCCAATACTTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: QQAPVCVVPHHVSMCSHHDVGHS*PNTFHN
Trigger: ATTGTGGAAAGTATTGGGCCAGGAGTGACCAACGTC...ATGATGAGAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp TGCTTTCATGGTTTCAGATCCACCTGCACAGTCAAGGGCAAAATCCACACCTCCGACGTTGGTCACTCCTaGCCCAATACTTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: CFHGFRSTCTVKGKIHTSDVGHS*PNTFHN
Trigger: ATTGTGGAAAGTATTGGGCCAGGAGTGACCAACGTC...GGAGGTGTGGATTTTGCCCTTGACTGTGCAGGTGGATCTGAAACCATGAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CCA 90 bp ATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCTCAATGATAACTTCCTaGATCGGTTTATGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: MLSLCRLPALNRPQCVLFSMITS*IGLCKS
Trigger: AGACTTACATAAACCGATCCAGGAAGTTATCATTGA...GAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp TGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTATCAAAAGGCAGGGTATaGGTCACCAGTGCATCCAGA +
Preference number: 4 (lower is better)
Translates to: CFAAQIISSPRYEAQHPLSKGRV*VTSASR
Trigger: TCTGGATGCACTGGTGACCCATACCCTGCCTTTTGA...TAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp TACCATGGTGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCGGTAAACATGTACCATaGTGCTTTGCTGCACAGATC +
Preference number: 4 (lower is better)
Translates to: YHGALLHRSSHHPGMKPSGKHVP*CFAAQI
Trigger: GATCTGTGCAGCAAAGCACCATGGTACATGTTTACC...GCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCACCATGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp TACCATGGTGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCTGCTTACTTTGCCCTTaGTGCCCATTTTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: YHGALLHRSSHHPGMKPSCLLCP*CPFFFG
Trigger: CCCAAAGAAAAATGGGCACCAAGGGCAAAGTAAGCA...GCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCACCATGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508393.5
CDS-3UTR TCA 90 bp TTCATTAGGTCAAATGCCTCACTGATTTTGTCAAAAGGCAGGGTATGGGTCACCAGCCCCATAGCCAGTTaGAAACCCACATCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: FIRSNASLILSKGRVWVTSPIAS*KPTSKQ
Trigger: CTGCTTGGATGTGGGTTTTCAACTGGCTATGGGGCT...GGTGACCCATACCCTGCCTTTTGACAAAATCAGTGAGGCATTTGACCTAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506705.5
ENST00000509471.5
CDS-3UTR TCA 90 bp AGTGGAATTACTTTGTCACCTGGTTTGACGTTGGTCACTCCTGGCCCAATACTTTCCAATGAAAGTACATaGTCCCCAGCCTGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: SGITLSPGLTLVTPGPILSNEST*SPACGC
Trigger: ACAACCGCAGGCTGGGGATCATGTACTTTCATTGGA...AAGTATTGGGCCAGGAGTGACCAACGTCAAACCAGGTGACAAAGTAATTCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR GCA 90 bp CTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCGATAGTATTCTGAATTaGTCCTGGCATCTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: LPSTGPSVCCSPSCVHVFDSILN*SWHLQK
Trigger: CTTTTGAAGATGCCAGGAGCAATTCAGAATACTATC...GAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265512.12
ENST00000508393.5
CDS-3UTR GCA 90 bp GCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCATCATTTAGCTACCATGGTGCTTTGCTaGACAGATCATCTCATCACC +
Preference number: 4 (lower is better)
Translates to: APVCVVPHHVSMCSHHLATMVLC*TDHLIT
Trigger: GGTGATGAGATGATCTGTGCAGCAAAGCACCATGGT...AGCTAAATGATGAGAACACATGGACACATGATGGGGAACAACACACACTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp TACCATGGTGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCAAACATGTACCATGGTaGTTTGCTGCACAGATCATC +
Preference number: 4 (lower is better)
Translates to: YHGALLHRSSHHPGMKPSKHVPW*FAAQII
Trigger: GATGATCTGTGCAGCAAAGCACCATGGTACATGTTT...GCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCACCATGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp GCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTAGCTATTCTTATACCTGCAGCCTCATaGCCAACGATCACTGGGAAA +
Preference number: 4 (lower is better)
Translates to: AQIISSPRYEAQHPLAILIPAAS*PTITGK
Trigger: TTTCCCAGTGATCGTTGGCCATGAGGCTGCAGGTAT...AAGAATAGCTAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp GCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCACACAAATTTGTGAGTaGACTCAGACAAAACTTGCA +
Preference number: 4 (lower is better)
Translates to: ALNRPQCVLFPIMCPCVLTQICE*TQTKLA
Trigger: TGCAAGTTTTGTCTGAGTCCACTCACAAATTTGTGT...GAGAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp GACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATTCAATGATAACTTCCTaGATCGGTTTATGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: DSLPSTGPSVCCSPSCVHSMITS*IGLCKS
Trigger: AGACTTACATAAACCGATCCAGGAAGTTATCATTGA...ATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp CCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCACAGAGAGGTAGCACCAGGGCTGCTTTCATaGTTTCAGATCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: PSNLESITVASVWHREVAPGLLS*FQIHLH
Trigger: GTGCAGGTGGATCTGAAACCATGAAAGCAGCCCTGG...TGCTACCTCTCTGTGCCATACTGATGCCACTGTTATCGATTCTAAATTTGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR TCA 90 bp GTGCAGGTTTGTTACATAGGTAAACATGTACCATGGTGCTTTGCTGCACAGATCTCCAATGAAAGTACATaGTCCCCAGCCTGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: VQVCYIGKHVPWCFAAQISNEST*SPACGC
Trigger: ACAACCGCAGGCTGGGGATCATGTACTTTCATTGGA...GATCTGTGCAGCAAAGCACCATGGTACATGTTTACCTATGTAACAAACCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR TCA 90 bp TCATGGCCAACGATCACTGGGAAAGCTAGGCCCTCAAATTTAGAATCGATAACACAGCAGCTACTCCAATaGAAGTACATGATCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SWPTITGKARPSNLESITQQLLQ*KYMIPS
Trigger: GCTGGGGATCATGTACTTTCATTGGAGTAGCTGCTG...TGTTATCGATTCTAAATTTGAGGGCCTAGCTTTCCCAGTGATCGTTGGCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR TCA 90 bp GCTAGGCCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCACAGAGAGGGTCAAATGCCTCACTaGTTTTGTCAAAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ARPSNLESITVASVWHREGQMPH*FCQKAG
Trigger: CCCTGCCTTTTGACAAAATCAGTGAGGCATTTGACC...CTCTCTGTGCCATACTGATGCCACTGTTATCGATTCTAAATTTGAGGGCCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR GCA 90 bp GCTAGGCCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCACAGAGAGCTTCAACCTCTTCAATaGAAAGGGGCTTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: ARPSNLESITVASVWHRELQPLQ*KGACLL
Trigger: AAGCAGGCAAGCCCCTTTGCATTGAAGAGGTTGAAG...CTCTCTGTGCCATACTGATGCCACTGTTATCGATTCTAAATTTGAGGGCCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS-3UTR GCA 90 bp GCTAGGCCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCACAGAGAGACTTTCCACAATACCTaGAGCCTCATGGCCAACGAT +
Preference number: 4 (lower is better)
Translates to: ARPSNLESITVASVWHRETFHNT*SLMAND
Trigger: ATCGTTGGCCATGAGGCTGCAGGTATTGTGGAAAGT...CTCTCTGTGCCATACTGATGCCACTGTTATCGATTCTAAATTTGAGGGCCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS-3UTR GCA 90 bp GCTAGGCCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCACAGAGAGGGTTTCAGATCCACCTaGACAGTCAAGGGCAAAATC +
Preference number: 4 (lower is better)
Translates to: ARPSNLESITVASVWHREGFRST*TVKGKI
Trigger: GATTTTGCCCTTGACTGTGCAGGTGGATCTGAAACC...CTCTCTGTGCCATACTGATGCCACTGTTATCGATTCTAAATTTGAGGGCCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR GCA 90 bp GCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCATCATTTAGCTTGTACCATGGTGCTTTaGTGCACAGATCATCTCATC +
Preference number: 4 (lower is better)
Translates to: APVCVVPHHVSMCSHHLACTMVL*CTDHLI
Trigger: GATGAGATGATCTGTGCAGCAAAGCACCATGGTACA...AGCTAAATGATGAGAACACATGGACACATGATGGGGAACAACACACACTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp AACCTCTTCAATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTGCTTTGCATCTGAGTCAGATAATTaGTGGAGAATAGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: NLFNAKGLACFPGDGCFASESDN*WRIDVF
Trigger: AAACACATCTATTCTCCAGCAATTATCTGACTCAGA...TGCAAAGCAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTGAAGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS-3UTR CCA 90 bp GCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCTTTGGGAAACTGTGTTaGAAGTTTCTTTCTGAGTTA +
Preference number: 4 (lower is better)
Translates to: ALNRPQCVLFPIMCPCVLFGKLC*KFLSEL
Trigger: TAACTCAGAAAGAAACTTCCAACACAGTTTCCCAAA...GAGAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp GCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTAGCTATTCTTACAGTGGCATCAGTATaGCACAGAGAGGTAGCAATG +
Preference number: 4 (lower is better)
Translates to: AQIISSPRYEAQHPLAILTVASV*HREVAM
Trigger: CATTGCTACCTCTCTGTGCCATACTGATGCCACTGT...AAGAATAGCTAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp AGGCCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCACAGAGAGGTAATACCTGCAGCCTCATaGCCAACGATCACTGGGAAA +
Preference number: 4 (lower is better)
Translates to: RPSNLESITVASVWHREVIPAAS*PTITGK
Trigger: TTTCCCAGTGATCGTTGGCCATGAGGCTGCAGGTAT...TACCTCTCTGTGCCATACTGATGCCACTGTTATCGATTCTAAATTTGAGGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS-3UTR CCA 90 bp GCTAGGCCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCACAGAGAGGACGTTGGTCACTCCTaGCCCAATACTTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: ARPSNLESITVASVWHREDVGHS*PNTFHN
Trigger: ATTGTGGAAAGTATTGGGCCAGGAGTGACCAACGTC...CTCTCTGTGCCATACTGATGCCACTGTTATCGATTCTAAATTTGAGGGCCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS-3UTR CCA 90 bp CCATGGTGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATGTCAGTGACCAGCTTTaGGATAGAATCTACACTTTT +
Preference number: 4 (lower is better)
Translates to: PWCFAAQIISSPRYEAQHVSDQL*DRIYTF
Trigger: AAAAGTGTAGATTCTATCCCAAAGCTGGTCACTGAC...ATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCACCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp TGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTAGGTAAACATGTACCATaGTGCTTTGCTGCACAGATC +
Preference number: 4 (lower is better)
Translates to: CFAAQIISSPRYEAQHPLGKHVP*CFAAQI
Trigger: GATCTGTGCAGCAAAGCACCATGGTACATGTTTACC...TAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp TTCATTAGGTCAAATGCCTCACTGATTTTGTCAAAAGGCAGGGTATGGGTCACCACTTTCCACAATACCTaGAGCCTCATGGCCAACGAT +
Preference number: 4 (lower is better)
Translates to: FIRSNASLILSKGRVWVTTFHNT*SLMAND
Trigger: ATCGTTGGCCATGAGGCTGCAGGTATTGTGGAAAGT...GGTGACCCATACCCTGCCTTTTGACAAAATCAGTGAGGCATTTGACCTAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR GCA 90 bp GTGCAGGTTTGTTACATAGGTAAACATGTACCATGGTGCTTTGCTGCACAGATCGGTTTCAGATCCACCTaGACAGTCAAGGGCAAAATC +
Preference number: 4 (lower is better)
Translates to: VQVCYIGKHVPWCFAAQIGFRST*TVKGKI
Trigger: GATTTTGCCCTTGACTGTGCAGGTGGATCTGAAACC...GATCTGTGCAGCAAAGCACCATGGTACATGTTTACCTATGTAACAAACCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp TTCATTAGGTCAAATGCCTCACTGATTTTGTCAAAAGGCAGGGTATGGGTCACCGGTTTCAGATCCACCTaGACAGTCAAGGGCAAAATC +
Preference number: 4 (lower is better)
Translates to: FIRSNASLILSKGRVWVTGFRST*TVKGKI
Trigger: GATTTTGCCCTTGACTGTGCAGGTGGATCTGAAACC...GGTGACCCATACCCTGCCTTTTGACAAAATCAGTGAGGCATTTGACCTAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506705.5
ENST00000509471.5
CDS-3UTR GCA 90 bp TGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTAGGTATGGGTCACCAGTaGATCCAGATTGAATTTCTT +
Preference number: 4 (lower is better)
Translates to: CFAAQIISSPRYEAQHPLGMGHQ*IQIEFL
Trigger: AAGAAATTCAATCTGGATGCACTGGTGACCCATACC...TAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp GCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCATCATTTAGCTAAACATGTACCATGGTaGTTTGCTGCACAGATCATC +
Preference number: 4 (lower is better)
Translates to: APVCVVPHHVSMCSHHLAKHVPW*FAAQII
Trigger: GATGATCTGTGCAGCAAAGCACCATGGTACATGTTT...AGCTAAATGATGAGAACACATGGACACATGATGGGGAACAACACACACTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp AGGCCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCACAGAGAGGTAATGAAAGCCCTGCTTTaGCCTTGGTGCCCATTTTTC +
Preference number: 4 (lower is better)
Translates to: RPSNLESITVASVWHREVMKALL*PWCPFF
Trigger: GAAAAATGGGCACCAAGGGCAAAGCAGGGCTTTCAT...TACCTCTCTGTGCCATACTGATGCCACTGTTATCGATTCTAAATTTGAGGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504894.1
CDS-3UTR TCA 90 bp TCATGTGTCCATGTGTTCTCATCATTTAGCTCCCAGAAAATTTTCAACATAGACCTTTGTCACCTGGTTTaGCGTTGGTCACTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SCVHVFSSFSSQKIFNIDLCHLV*RWSLLA
Trigger: GGCCAGGAGTGACCAACGTCAAACCAGGTGACAAAG...GTCTATGTTGAAAATTTTCTGGGAGCTAAATGATGAGAACACATGGACACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR TCA 90 bp TGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTATCTTCCATTAGTTGTTaGTCACTAGCAGGACTTTTG +
Preference number: 4 (lower is better)
Translates to: CFAAQIISSPRYEAQHPLSSISC*SLAGLL
Trigger: CAAAAGTCCTGCTAGTGATCAACAACTAATGGAAGA...TAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp TGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTAATAGTCTCCCTGTTGTaGTATCAAATACCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: CFAAQIISSPRYEAQHPLIVSLL*YQIPGL
Trigger: AAGACCTGGTATTTGATAGCACAACAGGGAGACTAT...TAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp GCTAGGCCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCACAGAGAGTGTGTTTTACATCTCTaGAACTCGAAGTGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ARPSNLESITVASVWHRECVLHL*NSKCGP
Trigger: AGGACCACACTTCGAGTTGCAGAGATGTAAAACACA...CTCTCTGTGCCATACTGATGCCACTGTTATCGATTCTAAATTTGAGGGCCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS-3UTR GCA 90 bp CATGGTTTCAGATCCACCTGCACAGTCAAGGGCAAAATCCACACCTCCCTTGGTTCTGAGTCAGATAATTaGTGGAGAATAGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: HGFRSTCTVKGKIHTSLGSESDN*WRIDVF
Trigger: AAACACATCTATTCTCCAGCAATTATCTGACTCAGA...ACCAAGGGAGGTGTGGATTTTGCCCTTGACTGTGCAGGTGGATCTGAAACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR GCA 90 bp TGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTATTACTTTGCCCTTGGTaGCCATTTTTCTTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: CFAAQIISSPRYEAQHPLLLCPW*PFFFGK
Trigger: TTTCCCAAAGAAAAATGGGCACCAAGGGCAAAGTAA...TAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508393.5
CDS-3UTR CCA 90 bp CCATGGTGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATTTTGGGAAACTGTGTTaGAAGTTTCTTTCTGAGTTA +
Preference number: 4 (lower is better)
Translates to: PWCFAAQIISSPRYEAQHFGKLC*KFLSEL
Trigger: TAACTCAGAAAGAAACTTCCAACACAGTTTCCCAAA...ATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp CAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCATCATACACAAATTTGTGAGTaGACTCAGACAAAACTTGCA +
Preference number: 4 (lower is better)
Translates to: QQAPVCVVPHHVSMCSHHTQICE*TQTKLA
Trigger: TGCAAGTTTTGTCTGAGTCCACTCACAAATTTGTGT...ATGATGAGAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp CCATGGTGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATTCAATGATAACTTCCTaGATCGGTTTATGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: PWCFAAQIISSPRYEAQHSMITS*IGLCKS
Trigger: AGACTTACATAAACCGATCCAGGAAGTTATCATTGA...ATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCACCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp TGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTAGTCAGTGACCAGCTTTaGGATAGAATCTACACTTTT +
Preference number: 4 (lower is better)
Translates to: CFAAQIISSPRYEAQHPLVSDQL*DRIYTF
Trigger: AAAAGTGTAGATTCTATCCCAAAGCTGGTCACTGAC...TAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp AGGCAGGTTCACATTCAATCAGATAGTATTCTGAATTGCTCCTGGCATCTTCAATCAAAAGGCAGGGTATaGGTCACCAGTGCATCCAGA +
Preference number: 4 (lower is better)
Translates to: RQVHIQSDSILNCSWHLQSKGRV*VTSASR
Trigger: TCTGGATGCACTGGTGACCCATACCCTGCCTTTTGA...TTGAAGATGCCAGGAGCAATTCAGAATACTATCTGATTGAATGTGAACCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509471.5
CDS-3UTR CCA 90 bp TTCATTAGGTCAAATGCCTCACTGATTTTGTCAAAAGGCAGGGTATGGGTCACCACACTTTTCCAACCATaGTTTCAGATCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: FIRSNASLILSKGRVWVTTLFQP*FQIHLH
Trigger: GTGCAGGTGGATCTGAAACCATGGTTGGAAAAGTGT...GGTGACCCATACCCTGCCTTTTGACAAAATCAGTGAGGCATTTGACCTAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509471.5
CDS-3UTR TCA 90 bp CATCCAAGCAGACAAACTCTCTCTAAATTTGCATCATCATCTATTTTGGCAAGAAGCCCCATAGCCAGTTaGAAACCCACATCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: HPSRQTLSKFASSSILARSPIAS*KPTSKQ
Trigger: CTGCTTGGATGTGGGTTTTCAACTGGCTATGGGGCT...TCTTGCCAAAATAGATGATGATGCAAATTTAGAGAGAGTTTGTCTGCTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR TCA 90 bp TTGCTGTTGACTATAGTCTCCCTGTTGTGCTATCAAATACCAGGTCTTATTCATCAGCAGCTACTCCAATaGAAGTACATGATCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LLLTIVSLLCYQIPGLIHQQLLQ*KYMIPS
Trigger: GCTGGGGATCATGTACTTTCATTGGAGTAGCTGCTG...ATGAATAAGACCTGGTATTTGATAGCACAACAGGGAGACTATAGTCAACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR TCA 90 bp AGGCAGGTTCACATTCAATCAGATAGTATTCTGAATTGCTCCTGGCATCTTCAAGGTCAAATGCCTCACTaGTTTTGTCAAAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RQVHIQSDSILNCSWHLQGQMPH*FCQKAG
Trigger: CCCTGCCTTTTGACAAAATCAGTGAGGCATTTGACC...TTGAAGATGCCAGGAGCAATTCAGAATACTATCTGATTGAATGTGAACCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509471.5
CDS-3UTR GCA 90 bp TCATGGCCAACGATCACTGGGAAAGCTAGGCCCTCAAATTTAGAATCGATAACAGGTATGGGTCACCAGTaGATCCAGATTGAATTTCTT +
Preference number: 4 (lower is better)
Translates to: SWPTITGKARPSNLESITGMGHQ*IQIEFL
Trigger: AAGAAATTCAATCTGGATGCACTGGTGACCCATACC...TGTTATCGATTCTAAATTTGAGGGCCTAGCTTTCCCAGTGATCGTTGGCCATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR GCA 90 bp TTCATTAGGTCAAATGCCTCACTGATTTTGTCAAAAGGCAGGGTATGGGTCACCGGTATGGGTCACCAGTaGATCCAGATTGAATTTCTT +
Preference number: 4 (lower is better)
Translates to: FIRSNASLILSKGRVWVTGMGHQ*IQIEFL
Trigger: AAGAAATTCAATCTGGATGCACTGGTGACCCATACC...GGTGACCCATACCCTGCCTTTTGACAAAATCAGTGAGGCATTTGACCTAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506705.5
ENST00000509471.5
CDS-3UTR GCA 90 bp GTGCAGGTTTGTTACATAGGTAAACATGTACCATGGTGCTTTGCTGCACAGATCAAACATGTACCATGGTaGTTTGCTGCACAGATCATC +
Preference number: 4 (lower is better)
Translates to: VQVCYIGKHVPWCFAAQIKHVPW*FAAQII
Trigger: GATGATCTGTGCAGCAAAGCACCATGGTACATGTTT...GATCTGTGCAGCAAAGCACCATGGTACATGTTTACCTATGTAACAAACCTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp CCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCACAGAGAGGTAGCATGTGTTTTACATCTCTaGAACTCGAAGTGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PSNLESITVASVWHREVACVLHL*NSKCGP
Trigger: AGGACCACACTTCGAGTTGCAGAGATGTAAAACACA...TGCTACCTCTCTGTGCCATACTGATGCCACTGTTATCGATTCTAAATTTGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS-3UTR GCA 90 bp AGGCCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCACAGAGAGGTATTCCCAGGCGATGGCTaGTTTGCATTTAATAACCTT +
Preference number: 4 (lower is better)
Translates to: RPSNLESITVASVWHREVFPGDG*FAFNNL
Trigger: AAGGTTATTAAATGCAAAGCAGCCATCGCCTGGGAA...TACCTCTCTGTGCCATACTGATGCCACTGTTATCGATTCTAAATTTGAGGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS-3UTR TCA 90 bp TCATGGCCAACGATCACTGGGAAAGCTAGGCCCTCAAATTTAGAATCGATAACACTATTTTGGCAAGATTaGTATCTGACACCACAGTGT +
Preference number: 4 (lower is better)
Translates to: SWPTITGKARPSNLESITLFWQD*YLTPQC
Trigger: ACACTGTGGTGTCAGATATCAATCTTGCCAAAATAG...TGTTATCGATTCTAAATTTGAGGGCCTAGCTTTCCCAGTGATCGTTGGCCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR TCA 90 bp AGGCAGGTTCACATTCAATCAGATAGTATTCTGAATTGCTCCTGGCATCTTCAAGGCATCTTCAAAAGATaGGGATTGTTCGGACGCTTT +
Preference number: 4 (lower is better)
Translates to: RQVHIQSDSILNCSWHLQGIFKR*GLFGRF
Trigger: AAAGCGTCCGAACAATCCTCATCTTTTGAAGATGCC...TTGAAGATGCCAGGAGCAATTCAGAATACTATCTGATTGAATGTGAACCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509471.5
CDS-3UTR TCA 90 bp GGGGTGTCCATCTCCTCAAGCATTTATTTGTGTTACAAACAATCCATTATACTCATTAGCTATTCTTCCTaGTGCTCTCTCTCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: GVSISSSIYLCYKQSIILISYSS*CSLSAD
Trigger: GTCGGCAGAGAGAGAGCATCAGGAAGAATAGCTAAT...GAGTATAATGGATTGTTTGTAACACAAATAAATGCTTGAGGAGATGGACACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265512.12
ENST00000508393.5
CDS-3UTR CCA 90 bp TTGCTGTTGACTATAGTCTCCCTGTTGTGCTATCAAATACCAGGTCTTATTCATGACGTTGGTCACTCCTaGCCCAATACTTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: LLLTIVSLLCYQIPGLIHDVGHS*PNTFHN
Trigger: ATTGTGGAAAGTATTGGGCCAGGAGTGACCAACGTC...ATGAATAAGACCTGGTATTTGATAGCACAACAGGGAGACTATAGTCAACAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp ATGAGGATTGTTCGGACGCTTTTTCCTTGGTTCATTAGGTCAAATGCCTCACTGATTCTGAATTGCTCCTaGCATCTTCAAAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: MRIVRTLFPWFIRSNASLILNCS*HLQKMR
Trigger: CCTCATCTTTTGAAGATGCCAGGAGCAATTCAGAAT...CAGTGAGGCATTTGACCTAATGAACCAAGGAAAAAGCGTCCGAACAATCCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509471.5
CDS-3UTR GCA 90 bp GTGCAGGTTTGTTACATAGGTAAACATGTACCATGGTGCTTTGCTGCACAGATCGACTCAGACAAAACTTaGATTTTCTACATAGAGGTG +
Preference number: 4 (lower is better)
Translates to: VQVCYIGKHVPWCFAAQIDSDKT*IFYIEV
Trigger: CACCTCTATGTAGAAAATGCAAGTTTTGTCTGAGTC...GATCTGTGCAGCAAAGCACCATGGTACATGTTTACCTATGTAACAAACCTGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp CCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCACAGAGAGGTAGCAGACTCAGACAAAACTTaGATTTTCTACATAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PSNLESITVASVWHREVADSDKT*IFYIEV
Trigger: CACCTCTATGTAGAAAATGCAAGTTTTGTCTGAGTC...TGCTACCTCTCTGTGCCATACTGATGCCACTGTTATCGATTCTAAATTTGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CCA 90 bp TCATGTGTCCATGTGTTCTCATCATTTAGCTCCCAGAAAATTTTCAACATAGACGACGTTGGTCACTCCTaGCCCAATACTTTCCACAAT +
Preference number: 4 (lower is better)
Translates to: SCVHVFSSFSSQKIFNIDDVGHS*PNTFHN
Trigger: ATTGTGGAAAGTATTGGGCCAGGAGTGACCAACGTC...GTCTATGTTGAAAATTTTCTGGGAGCTAAATGATGAGAACACATGGACACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp ATAACTTCCTGGATCGGTTTATGTAAGTCTCTAGGATTGAGGCAGTCAGTGGCTACACAAATTTGTGAGTaGACTCAGACAAAACTTGCA +
Preference number: 4 (lower is better)
Translates to: ITSWIGLCKSLGLRQSVATQICE*TQTKLA
Trigger: TGCAAGTTTTGTCTGAGTCCACTCACAAATTTGTGT...AGCCACTGACTGCCTCAATCCTAGAGACTTACATAAACCGATCCAGGAAGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR TCA 90 bp AGGCAGGTTCACATTCAATCAGATAGTATTCTGAATTGCTCCTGGCATCTTCAAAATCAGATAGTATTCTaGATTGCTCCTGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: RQVHIQSDSILNCSWHLQNQIVF*IAPGIF
Trigger: GAAGATGCCAGGAGCAATTCAGAATACTATCTGATT...TTGAAGATGCCAGGAGCAATTCAGAATACTATCTGATTGAATGTGAACCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509471.5
CDS-3UTR GCA 90 bp GGGGTGTCCATCTCCTCAAGCATTTATTTGTGTTACAAACAATCCATTATACTCGGTATGGGTCACCAGTaGATCCAGATTGAATTTCTT +
Preference number: 4 (lower is better)
Translates to: GVSISSSIYLCYKQSIILGMGHQ*IQIEFL
Trigger: AAGAAATTCAATCTGGATGCACTGGTGACCCATACC...GAGTATAATGGATTGTTTGTAACACAAATAAATGCTTGAGGAGATGGACACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265512.12
ENST00000508393.5
CDS-3UTR GCA 90 bp TCATGTGTCCATGTGTTCTCATCATTTAGCTCCCAGAAAATTTTCAACATAGACTGTACCATGGTGCTTTaGTGCACAGATCATCTCATC +
Preference number: 4 (lower is better)
Translates to: SCVHVFSSFSSQKIFNIDCTMVL*CTDHLI
Trigger: GATGAGATGATCTGTGCAGCAAAGCACCATGGTACA...GTCTATGTTGAAAATTTTCTGGGAGCTAAATGATGAGAACACATGGACACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp TTGCTGTTGACTATAGTCTCCCTGTTGTGCTATCAAATACCAGGTCTTATTCATTGTGTTTTACATCTCTaGAACTCGAAGTGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LLLTIVSLLCYQIPGLIHCVLHL*NSKCGP
Trigger: AGGACCACACTTCGAGTTGCAGAGATGTAAAACACA...ATGAATAAGACCTGGTATTTGATAGCACAACAGGGAGACTATAGTCAACAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508393.5
CDS-3UTR CCA 90 bp AGGCCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCACAGAGAGGTATTTGGGAAACTGTGTTaGAAGTTTCTTTCTGAGTTA +
Preference number: 4 (lower is better)
Translates to: RPSNLESITVASVWHREVFGKLC*KFLSEL
Trigger: TAACTCAGAAAGAAACTTCCAACACAGTTTCCCAAA...TACCTCTCTGTGCCATACTGATGCCACTGTTATCGATTCTAAATTTGAGGGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS-3UTR CCA 90 bp TTCATTAGGTCAAATGCCTCACTGATTTTGTCAAAAGGCAGGGTATGGGTCACCTTTGGGAAACTGTGTTaGAAGTTTCTTTCTGAGTTA +
Preference number: 4 (lower is better)
Translates to: FIRSNASLILSKGRVWVTFGKLC*KFLSEL
Trigger: TAACTCAGAAAGAAACTTCCAACACAGTTTCCCAAA...GGTGACCCATACCCTGCCTTTTGACAAAATCAGTGAGGCATTTGACCTAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CCA 90 bp GGGGTGTCCATCTCCTCAAGCATTTATTTGTGTTACAAACAATCCATTATACTCAATTACTTTGTCACCTaGTTTGACGTTGGTCACTCC +
Preference number: 4 (lower is better)
Translates to: GVSISSSIYLCYKQSIILNYFVT*FDVGHS
Trigger: GGAGTGACCAACGTCAAACCAGGTGACAAAGTAATT...GAGTATAATGGATTGTTTGTAACACAAATAAATGCTTGAGGAGATGGACACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265512.12
ENST00000508393.5
CDS-3UTR CCA 90 bp AGGCCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCACAGAGAGGTATCAATGATAACTTCCTaGATCGGTTTATGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: RPSNLESITVASVWHREVSMITS*IGLCKS
Trigger: AGACTTACATAAACCGATCCAGGAAGTTATCATTGA...TACCTCTCTGTGCCATACTGATGCCACTGTTATCGATTCTAAATTTGAGGGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CCA 90 bp CAGGGTATGGGTCACCAGTGCATCCAGATTGAATTTCTTATTCTTATAGTCAGTGTCAGTGACCAGCTTTaGGATAGAATCTACACTTTT +
Preference number: 4 (lower is better)
Translates to: QGMGHQCIQIEFLILIVSVSDQL*DRIYTF
Trigger: AAAAGTGTAGATTCTATCCCAAAGCTGGTCACTGAC...ACTGACTATAAGAATAAGAAATTCAATCTGGATGCACTGGTGACCCATACCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506705.5
ENST00000509471.5
CDS-3UTR CCA 90 bp AGGCAGGTTCACATTCAATCAGATAGTATTCTGAATTGCTCCTGGCATCTTCAAGTCAGTGACCAGCTTTaGGATAGAATCTACACTTTT +
Preference number: 4 (lower is better)
Translates to: RQVHIQSDSILNCSWHLQVSDQL*DRIYTF
Trigger: AAAAGTGTAGATTCTATCCCAAAGCTGGTCACTGAC...TTGAAGATGCCAGGAGCAATTCAGAATACTATCTGATTGAATGTGAACCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509471.5
CDS-3UTR TCA 90 bp GGGGTGTCCATCTCCTCAAGCATTTATTTGTGTTACAAACAATCCATTATACTCAATCAGATAGTATTCTaGATTGCTCCTGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: GVSISSSIYLCYKQSIILNQIVF*IAPGIF
Trigger: GAAGATGCCAGGAGCAATTCAGAATACTATCTGATT...GAGTATAATGGATTGTTTGTAACACAAATAAATGCTTGAGGAGATGGACACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265512.12
ENST00000508393.5
CDS-3UTR GCA 90 bp TTGCTGTTGACTATAGTCTCCCTGTTGTGCTATCAAATACCAGGTCTTATTCATTTCCCAGGCGATGGCTaGTTTGCATTTAATAACTTT +
Preference number: 4 (lower is better)
Translates to: LLLTIVSLLCYQIPGLIHFPGDG*FAFNNF
Trigger: AAAGTTATTAAATGCAAAGCAGCCATCGCCTGGGAA...ATGAATAAGACCTGGTATTTGATAGCACAACAGGGAGACTATAGTCAACAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265512.12
ENST00000629236.2
CDS-3UTR GCA 90 bp CAGGGTATGGGTCACCAGTGCATCCAGATTGAATTTCTTATTCTTATAGTCAGTGATAGTATTCTGAATTaGTCCTGGCATCTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: QGMGHQCIQIEFLILIVSDSILN*SWHLQK
Trigger: CTTTTGAAGATGCCAGGAGCAATTCAGAATACTATC...ACTGACTATAAGAATAAGAAATTCAATCTGGATGCACTGGTGACCCATACCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509471.5
CDS-3UTR CCA 90 bp AGATTACTGATTTTCCCACACAAATTTGTGAGTGGACTCAGACAAAACTTGCATAATTACTTTGTCACCTaGTTTGACGTTGGTCACTCC +
Preference number: 4 (lower is better)
Translates to: RLLIFPHKFVSGLRQNLHNYFVT*FDVGHS
Trigger: GGAGTGACCAACGTCAAACCAGGTGACAAAGTAATT...ATGCAAGTTTTGTCTGAGTCCACTCACAAATTTGTGTGGGAAAATCAGTAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CCA 90 bp GGGGTGTCCATCTCCTCAAGCATTTATTTGTGTTACAAACAATCCATTATACTCATTCTGAATTGCTCCTaGCATCTTCAAAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: GVSISSSIYLCYKQSIILILNCS*HLQKMR
Trigger: CCTCATCTTTTGAAGATGCCAGGAGCAATTCAGAAT...GAGTATAATGGATTGTTTGTAACACAAATAAATGCTTGAGGAGATGGACACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265512.12
ENST00000508393.5
CDS-3UTR TCA 90 bp CATCCAAGCAGACAAACTCTCTCTAAATTTGCATCATCATCTATTTTGGCAAGATCTTCCATTAGTTGTTaGTCACTAGCAGGACTTTTG +
Preference number: 4 (lower is better)
Translates to: HPSRQTLSKFASSSILARSSISC*SLAGLL
Trigger: CAAAAGTCCTGCTAGTGATCAACAACTAATGGAAGA...TCTTGCCAAAATAGATGATGATGCAAATTTAGAGAGAGTTTGTCTGCTTGGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR TCA 90 bp TCATGTGTCCATGTGTTCTCATCATTTAGCTCCCAGAAAATTTTCAACATAGACCTATTTTGGCAAGATTaGTATCTGACACCACAGTGT +
Preference number: 4 (lower is better)
Translates to: SCVHVFSSFSSQKIFNIDLFWQD*YLTPQC
Trigger: ACACTGTGGTGTCAGATATCAATCTTGCCAAAATAG...GTCTATGTTGAAAATTTTCTGGGAGCTAAATGATGAGAACACATGGACACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR GCA 90 bp GGGGTGTCCATCTCCTCAAGCATTTATTTGTGTTACAAACAATCCATTATACTCGATAGTATTCTGAATTaGTCCTGGCATCTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: GVSISSSIYLCYKQSIILDSILN*SWHLQK
Trigger: CTTTTGAAGATGCCAGGAGCAATTCAGAATACTATC...GAGTATAATGGATTGTTTGTAACACAAATAAATGCTTGAGGAGATGGACACCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265512.12
ENST00000508393.5
CDS-3UTR GCA 90 bp TCATGTGTCCATGTGTTCTCATCATTTAGCTCCCAGAAAATTTTCAACATAGACATAGTCTCCCTGTTGTaGTATCAAATACCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SCVHVFSSFSSQKIFNIDIVSLL*YQIPGL
Trigger: AAGACCTGGTATTTGATAGCACAACAGGGAGACTAT...GTCTATGTTGAAAATTTTCTGGGAGCTAAATGATGAGAACACATGGACACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp CAGGGTATGGGTCACCAGTGCATCCAGATTGAATTTCTTATTCTTATAGTCAGTTCAATGATAACTTCCTaGATCGGTTTATGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: QGMGHQCIQIEFLILIVSSMITS*IGLCKS
Trigger: AGACTTACATAAACCGATCCAGGAAGTTATCATTGA...ACTGACTATAAGAATAAGAAATTCAATCTGGATGCACTGGTGACCCATACCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506705.5
ENST00000509471.5
CDS-3UTR GCA 90 bp TCATGTGTCCATGTGTTCTCATCATTTAGCTCCCAGAAAATTTTCAACATAGACGACTCAGACAAAACTTaGATTTTCTACATAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SCVHVFSSFSSQKIFNIDDSDKT*IFYIEV
Trigger: CACCTCTATGTAGAAAATGCAAGTTTTGTCTGAGTC...GTCTATGTTGAAAATTTTCTGGGAGCTAAATGATGAGAACACATGGACACATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CCA 90 bp TCATGTGTCCATGTGTTCTCATCATTTAGCTCCCAGAAAATTTTCAACATAGACTTTGGGAAACTGTGTTaGAAGTTTCTTTCTGAGTTA +
Preference number: 4 (lower is better)
Translates to: SCVHVFSSFSSQKIFNIDFGKLC*KFLSEL
Trigger: TAACTCAGAAAGAAACTTCCAACACAGTTTCCCAAA...GTCTATGTTGAAAATTTTCTGGGAGCTAAATGATGAGAACACATGGACACATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp GCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCAGGCCCCAGTGTGTGTaGTTCCCCATCATGTGTCCA +
Preference number: 5 (lower is better)
Translates to: ALSLPTPCPQQAPVCVVPRPQCV*FPIMCP
Trigger: TGGACACATGATGGGGAACAACACACACTGGGGCCT...GGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp CTATTCTTCCTGATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGAGGCCCCAGTGTGTGTaGTTCCCCATCATGTGTCCA +
Preference number: 5 (lower is better)
Translates to: LFFLMLSLCRLPALNRPQRPQCV*FPIMCP
Trigger: TGGACACATGATGGGGAACAACACACACTGGGGCCT...CTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCATCAGGAAGAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp ATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCAGGCCCCAGTGTGTGTaGTTCCCCATCATGTGTCCA +
Preference number: 5 (lower is better)
Translates to: MLSLCRLPALNRPQCVLFRPQCV*FPIMCP
Trigger: TGGACACATGATGGGGAACAACACACACTGGGGCCT...GAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp CTACTTCAACCTCTTCAATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTGTCAATGCAAAGGGGCTaGCCTGCTTCCCAGGCGATG +
Preference number: 5 (lower is better)
Translates to: LLQPLQCKGACLLPRRWLSMQRG*PASQAM
Trigger: CATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTGA...CAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTGAAGAGGTTGAAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS-3UTR CAA 90 bp AACCTCTTCAATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTGCTTTGCATCAATGCAAAGGGGCTaGCCTGCTTCCCAGGCGATG +
Preference number: 5 (lower is better)
Translates to: NLFNAKGLACFPGDGCFASMQRG*PASQAM
Trigger: CATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTGA...TGCAAAGCAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTGAAGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS-3UTR CAA 90 bp TGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTACTTTGTCACCTGGTTaGACGTTGGTCACTCCTGGC +
Preference number: 5 (lower is better)
Translates to: CRLPALNRPQCVLFPIMCTLSPG*TLVTPG
Trigger: GCCAGGAGTGACCAACGTCAAACCAGGTGACAAAGT...ACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp CTATTCTTCCTGATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGACTTTGTCACCTGGTTaGACGTTGGTCACTCCTGGC +
Preference number: 5 (lower is better)
Translates to: LFFLMLSLCRLPALNRPQTLSPG*TLVTPG
Trigger: GCCAGGAGTGACCAACGTCAAACCAGGTGACAAAGT...CTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCATCAGGAAGAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp GACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATACTTTGTCACCTGGTTaGACGTTGGTCACTCCTGGC +
Preference number: 5 (lower is better)
Translates to: DSLPSTGPSVCCSPSCVHTLSPG*TLVTPG
Trigger: GCCAGGAGTGACCAACGTCAAACCAGGTGACAAAGT...ATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp CTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCACCTGGTTTGACGTaGGTCACTCCTGGCCCAATA +
Preference number: 5 (lower is better)
Translates to: LPSTGPSVCCSPSCVHVFSPGLT*VTPGPI
Trigger: TATTGGGCCAGGAGTGACCAACGTCAAACCAGGTGA...GAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp GCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCTGTAAGTCTCTAGGATaGAGGCAGTCAGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: ALNRPQCVLFPIMCPCVLCKSLG*RQSVAP
Trigger: GGGAGCCACTGACTGCCTCAATCCTAGAGACTTACA...GAGAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp GCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCAAAATAGTCAATCCTTaGCTACCAGCAGCTACTCCA +
Preference number: 5 (lower is better)
Translates to: ALSLPTPCPQQAPVCVVPKIVNP*LPAATP
Trigger: TGGAGTAGCTGCTGGTAGCAAAGGATTGACTATTTT...GGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp CCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCAATGCCTCACTGATTTaGTCAAAAGGCAGGGTATGG +
Preference number: 5 (lower is better)
Translates to: PTPCPQQAPVCVVPHHVSNASLI*SKGRVW
Trigger: CCATACCCTGCCTTTTGACAAAATCAGTGAGGCATT...GGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp CTACTTCAACCTCTTCAATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTGAGCCCTGCTTTGCCCTaGGTGCCCATTTTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: LLQPLQCKGACLLPRRWLSPALP*VPIFLW
Trigger: CCAAAGAAAAATGGGCACCAAGGGCAAAGCAGGGCT...CAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTGAAGAGGTTGAAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504894.1
CDS-3UTR CAA 90 bp CCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCAAAATAGTCAATCCTTaGCTACCAGCAGCTACTCCA +
Preference number: 5 (lower is better)
Translates to: PTPCPQQAPVCVVPHHVSKIVNP*LPAATP
Trigger: TGGAGTAGCTGCTGGTAGCAAAGGATTGACTATTTT...GGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp CCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCTTAATAACTTTGCCCTaGGTGCCCATTTTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: PTPCPQQAPVCVVPHHVSLITLP*VPIFLW
Trigger: CCAAAGAAAAATGGGCACCAAGGGCAAAGTTATTAA...GGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265512.12
ENST00000629236.2
CDS-3UTR CAA 90 bp CCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCTCTATTTTGGCAAGATaGATATCTGACACCACAGTG +
Preference number: 5 (lower is better)
Translates to: PTPCPQQAPVCVVPHHVSSILAR*ISDTTV
Trigger: CACTGTGGTGTCAGATATCAATCTTGCCAAAATAGA...GGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp CTATTCTTCCTGATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGAAAATAGTCAATCCTTaGCTACCAGCAGCTACTCCA +
Preference number: 5 (lower is better)
Translates to: LFFLMLSLCRLPALNRPQKIVNP*LPAATP
Trigger: TGGAGTAGCTGCTGGTAGCAAAGGATTGACTATTTT...CTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCATCAGGAAGAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp CTATTCTTCCTGATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGACTATAGTCTCCCTGTaGTGCTATCAAATACCAGGT +
Preference number: 5 (lower is better)
Translates to: LFFLMLSLCRLPALNRPQTIVSL*CYQIPG
Trigger: ACCTGGTATTTGATAGCACAACAGGGAGACTATAGT...CTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCATCAGGAAGAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp TGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTACTATAGTCTCCCTGTaGTGCTATCAAATACCAGGT +
Preference number: 5 (lower is better)
Translates to: CRLPALNRPQCVLFPIMCTIVSL*CYQIPG
Trigger: ACCTGGTATTTGATAGCACAACAGGGAGACTATAGT...ACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp ATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCTTAATAACTTTGCCCTaGGTGCCCATTTTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: MLSLCRLPALNRPQCVLFLITLP*VPIFLW
Trigger: CCAAAGAAAAATGGGCACCAAGGGCAAAGTTATTAA...GAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265512.12
ENST00000629236.2
CDS-3UTR CAA 90 bp GCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTAGCTATTCTTTCAATGCAAAGGGGCTaGCCTGCTTCCCAGGCGATG +
Preference number: 5 (lower is better)
Translates to: AQIISSPRYEAQHPLAILSMQRG*PASQAM
Trigger: CATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTGA...AAGAATAGCTAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp AATCCTTTGCTACCAGCAGCTACTCCAATGAAAGTACATGATCCCCAGCCTGCGACTTTGTCACCTGGTTaGACGTTGGTCACTCCTGGC +
Preference number: 5 (lower is better)
Translates to: NPLLPAATPMKVHDPQPATLSPG*TLVTPG
Trigger: GCCAGGAGTGACCAACGTCAAACCAGGTGACAAAGT...CGCAGGCTGGGGATCATGTACTTTCATTGGAGTAGCTGCTGGTAGCAAAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CAA 90 bp CTATTCTTCCTGATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTCACTAGCAGGACTTTaGAGATTACTGATTTTCCCA +
Preference number: 5 (lower is better)
Translates to: LFFLMLSLCRLPALNRPQSLAGL*RLLIFP
Trigger: TGGGAAAATCAGTAATCTCAAAAGTCCTGCTAGTGA...CTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCATCAGGAAGAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp CTATTCTTCCTGATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTCTATTTTGGCAAGATaGATATCTGACACCACAGTG +
Preference number: 5 (lower is better)
Translates to: LFFLMLSLCRLPALNRPQSILAR*ISDTTV
Trigger: CACTGTGGTGTCAGATATCAATCTTGCCAAAATAGA...CTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCATCAGGAAGAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp TGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTAGAACCAGGGGTGACCTaGGCATTGTTGATTGCAGCC +
Preference number: 5 (lower is better)
Translates to: CFAAQIISSPRYEAQHPLEPGVT*ALLIAA
Trigger: GGCTGCAATCAACAATGCCAAGGTCACCCCTGGTTC...TAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp TGCTTTCATGGTTTCAGATCCACCTGCACAGTCAAGGGCAAAATCCACACCTCCTGTAAGTCTCTAGGATaGAGGCAGTCAGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: CFHGFRSTCTVKGKIHTSCKSLG*RQSVAP
Trigger: GGGAGCCACTGACTGCCTCAATCCTAGAGACTTACA...GGAGGTGTGGATTTTGCCCTTGACTGTGCAGGTGGATCTGAAACCATGAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CAA 90 bp ATGCTCTCTCTCTGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCAAATCCACACCTCCCTaGGTCAATTCAATGATAACT +
Preference number: 5 (lower is better)
Translates to: MLSLCRLPALNRPQCVLFKSTPP*VNSMIT
Trigger: AGTTATCATTGAATTGACCAAGGGAGGTGTGGATTT...GAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCAGAGAGAGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp GCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCAATGCCTCACTGATTTaGTCAAAAGGCAGGGTATGG +
Preference number: 5 (lower is better)
Translates to: ALNRPQCVLFPIMCPCVLNASLI*SKGRVW
Trigger: CCATACCCTGCCTTTTGACAAAATCAGTGAGGCATT...GAGAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp TGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTTTGCATTTAATAACTTaGCCCTTGGTGCCCATTTTT +
Preference number: 5 (lower is better)
Translates to: CRLPALNRPQCVLFPIMCLHLIT*PLVPIF
Trigger: AAAAATGGGCACCAAGGGCAAAGTTATTAAATGCAA...ACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265512.12
ENST00000629236.2
CDS-3UTR CAA 90 bp GCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCATCATTTAGCTTCACCTGGTTTGACGTaGGTCACTCCTGGCCCAATA +
Preference number: 5 (lower is better)
Translates to: APVCVVPHHVSMCSHHLASPGLT*VTPGPI
Trigger: TATTGGGCCAGGAGTGACCAACGTCAAACCAGGTGA...AGCTAAATGATGAGAACACATGGACACATGATGGGGAACAACACACACTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp TGCCGACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTGCATCATCATCTATTTaGGCAAGATTGATATCTGAC +
Preference number: 5 (lower is better)
Translates to: CRLPALNRPQCVLFPIMCASSSI*ARLISD
Trigger: GTCAGATATCAATCTTGCCAAAATAGATGATGATGC...ACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTCGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp GCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCATCATTTAGCTTGTAAGTCTCTAGGATaGAGGCAGTCAGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: APVCVVPHHVSMCSHHLACKSLG*RQSVAP
Trigger: GGGAGCCACTGACTGCCTCAATCCTAGAGACTTACA...AGCTAAATGATGAGAACACATGGACACATGATGGGGAACAACACACACTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp GACTCCCTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATAAATCCACACCTCCCTaGGTCAATTCAATGATAACT +
Preference number: 5 (lower is better)
Translates to: DSLPSTGPSVCCSPSCVHKSTPP*VNSMIT
Trigger: AGTTATCATTGAATTGACCAAGGGAGGTGTGGATTT...ATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAGGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp CATGATCCCCAGCCTGCGGTTGTACAGTCCAGGGCTGCTTTCATGGTTTCAGATAATGCCTCACTGATTTaGTCAAAAGGCAGGGTATGG +
Preference number: 5 (lower is better)
Translates to: HDPQPAVVQSRAAFMVSDNASLI*SKGRVW
Trigger: CCATACCCTGCCTTTTGACAAAATCAGTGAGGCATT...ATCTGAAACCATGAAAGCAGCCCTGGACTGTACAACCGCAGGCTGGGGATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CAA 90 bp CTACTTCAACCTCTTCAATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTGCAGGCGATGGCTGCTTaGCATTTAATAACCTTGATA +
Preference number: 5 (lower is better)
Translates to: LLQPLQCKGACLLPRRWLQAMAA*HLITLI
Trigger: TATCAAGGTTATTAAATGCAAAGCAGCCATCGCCTG...CAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTGAAGAGGTTGAAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS CCA 90 bp GCAACTCGAAGTGTGGTCCTCGGACAAGCATTTATTCACATCACTTaGGAATTTGTTAGAGATGAAAGCCCTGCTTTGCCCTTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: ATRSVVLGQAFIHIT*EFVRDESPALPLVP
Trigger: GGGCACCAAGGGCAAAGCAGGGCTTTCATCTCTAACAAATTCCCAAGTGATGTGAATAAATGCTTGTCCGAGGACCACACTTCGAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504894.1
CDS-3UTR CAA 90 bp CTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCACTAGCAGGACTTTaGAGATTACTGATTTTCCCA +
Preference number: 5 (lower is better)
Translates to: LPSTGPSVCCSPSCVHVFSLAGL*RLLIFP
Trigger: TGGGAAAATCAGTAATCTCAAAAGTCCTGCTAGTGA...GAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp TTCATTAGGTCAAATGCCTCACTGATTTTGTCAAAAGGCAGGGTATGGGTCACCGAACCAGGGGTGACCTaGGCATTGTTGATTGCAGCC +
Preference number: 5 (lower is better)
Translates to: FIRSNASLILSKGRVWVTEPGVT*ALLIAA
Trigger: GGCTGCAATCAACAATGCCAAGGTCACCCCTGGTTC...GGTGACCCATACCCTGCCTTTTGACAAAATCAGTGAGGCATTTGACCTAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506705.5
ENST00000509471.5
CDS-3UTR CAA 90 bp CTGCCCTCAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCAAATCCACACCTCCCTaGGTCAATTCAATGATAACT +
Preference number: 5 (lower is better)
Translates to: LPSTGPSVCCSPSCVHVFKSTPP*VNSMIT
Trigger: AGTTATCATTGAATTGACCAAGGGAGGTGTGGATTT...GAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTGAGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp AGGCCCTCAAATTTAGAATCGATAACAGTGGCATCAGTATGGCACAGAGAGGTATCACCTGGTTTGACGTaGGTCACTCCTGGCCCAATA +
Preference number: 5 (lower is better)
Translates to: RPSNLESITVASVWHREVSPGLT*VTPGPI
Trigger: TATTGGGCCAGGAGTGACCAACGTCAAACCAGGTGA...TACCTCTCTGTGCCATACTGATGCCACTGTTATCGATTCTAAATTTGAGGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS-3UTR CAA 90 bp ATAACTTCCTGGATCGGTTTATGTAAGTCTCTAGGATTGAGGCAGTCAGTGGCTTCACCTGGTTTGACGTaGGTCACTCCTGGCCCAATA +
Preference number: 5 (lower is better)
Translates to: ITSWIGLCKSLGLRQSVASPGLT*VTPGPI
Trigger: TATTGGGCCAGGAGTGACCAACGTCAAACCAGGTGA...AGCCACTGACTGCCTCAATCCTAGAGACTTACATAAACCGATCCAGGAAGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CAA 90 bp CTACTTCAACCTCTTCAATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTGGCATCATCATCTATTTaGGCAAGATTGATATCTGAC +
Preference number: 5 (lower is better)
Translates to: LLQPLQCKGACLLPRRWLASSSI*ARLISD
Trigger: GTCAGATATCAATCTTGCCAAAATAGATGATGATGC...CAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTGAAGAGGTTGAAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CAA 90 bp GCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTAGCTATTCTTCAGGCGATGGCTGCTTaGCATTTAATAACTTTGCCC +
Preference number: 5 (lower is better)
Translates to: AQIISSPRYEAQHPLAILQAMAA*HLITLP
Trigger: GGGCAAAGTTATTAAATGCAAAGCAGCCATCGCCTG...AAGAATAGCTAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265512.12
ENST00000629236.2
CDS-3UTR CAA 90 bp TTGCTGTTGACTATAGTCTCCCTGTTGTGCTATCAAATACCAGGTCTTATTCATTCAATGCAAAGGGGCTaGCCTGCTTCCCAGGCGATG +
Preference number: 5 (lower is better)
Translates to: LLLTIVSLLCYQIPGLIHSMQRG*PASQAM
Trigger: CATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTGA...ATGAATAAGACCTGGTATTTGATAGCACAACAGGGAGACTATAGTCAACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp TCATGGCCAACGATCACTGGGAAAGCTAGGCCCTCAAATTTAGAATCGATAACAGATGAAAGCCCTGCTTaGCCCTTGGTGCCCATTTTT +
Preference number: 5 (lower is better)
Translates to: SWPTITGKARPSNLESITDESPA*PLVPIF
Trigger: AAAAATGGGCACCAAGGGCAAAGCAGGGCTTTCATC...TGTTATCGATTCTAAATTTGAGGGCCTAGCTTTCCCAGTGATCGTTGGCCATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504894.1
CDS TCA 90 bp GCCTGCTTCCCAGGCGATGGCTGCTTTGCATTTAATAACCCCGTTTaGTCTTTTCAGTGTTTGTTAGGGAAGCAGAGGTTTGATTTGAAG +
Preference number: 5 (lower is better)
Translates to: ACFPGDGCFAFNNPV*SFQCLLGKQRFDLK
Trigger: CTTCAAATCAAACCTCTGCTTCCCTAACAAACACTGAAAAGATCAAACGGGGTTATTAAATGCAAAGCAGCCATCGCCTGGGAAGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504581.1
CDS-3UTR CAA 90 bp TCATGTGTCCATGTGTTCTCATCATTTAGCTCCCAGAAAATTTTCAACATAGACTCAATGCAAAGGGGCTaGCCTGCTTCCCAGGCGATG +
Preference number: 5 (lower is better)
Translates to: SCVHVFSSFSSQKIFNIDSMQRG*PASQAM
Trigger: CATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATTGA...GTCTATGTTGAAAATTTTCTGGGAGCTAAATGATGAGAACACATGGACACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp CAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCATCATGGACTCAGACAAAACTaGCATTTTCTACATAGAGGT +
Preference number: 5 (lower is better)
Translates to: QQAPVCVVPHHVSMCSHHGLRQN*HFLHRG
Trigger: ACCTCTATGTAGAAAATGCAAGTTTTGTCTGAGTCC...ATGATGAGAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp AGGCAGGTTCACATTCAATCAGATAGTATTCTGAATTGCTCCTGGCATCTTCAATGTAAGTCTCTAGGATaGAGGCAGTCAGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: RQVHIQSDSILNCSWHLQCKSLG*RQSVAP
Trigger: GGGAGCCACTGACTGCCTCAATCCTAGAGACTTACA...TTGAAGATGCCAGGAGCAATTCAGAATACTATCTGATTGAATGTGAACCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509471.5
CDS-3UTR CAA 90 bp AATCCTTTGCTACCAGCAGCTACTCCAATGAAAGTACATGATCCCCAGCCTGCGAAATCCACACCTCCCTaGGTCAATTCAATGATAACT +
Preference number: 5 (lower is better)
Translates to: NPLLPAATPMKVHDPQPAKSTPP*VNSMIT
Trigger: AGTTATCATTGAATTGACCAAGGGAGGTGTGGATTT...CGCAGGCTGGGGATCATGTACTTTCATTGGAGTAGCTGCTGGTAGCAAAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CAA 90 bp GCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCATCATTTAGCTGGACTCAGACAAAACTaGCATTTTCTACATAGAGGT +
Preference number: 5 (lower is better)
Translates to: APVCVVPHHVSMCSHHLAGLRQN*HFLHRG
Trigger: ACCTCTATGTAGAAAATGCAAGTTTTGTCTGAGTCC...AGCTAAATGATGAGAACACATGGACACATGATGGGGAACAACACACACTGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp TGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTATCACTAGCAGGACTTTaGAGATTACTGATTTTCCCA +
Preference number: 5 (lower is better)
Translates to: CFAAQIISSPRYEAQHPLSLAGL*RLLIFP
Trigger: TGGGAAAATCAGTAATCTCAAAAGTCCTGCTAGTGA...TAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp CAACAGGCCCCAGTGTGTGTTGTTCCCCATCATGTGTCCATGTGTTCTCATCATGCATCATCATCTATTTaGGCAAGATTGATATCTGAC +
Preference number: 5 (lower is better)
Translates to: QQAPVCVVPHHVSMCSHHASSSI*ARLISD
Trigger: GTCAGATATCAATCTTGCCAAAATAGATGATGATGC...ATGATGAGAACACATGGACACATGATGGGGAACAACACACACTGGGGCCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp TCATGTGTCCATGTGTTCTCATCATTTAGCTCCCAGAAAATTTTCAACATAGACGAACCAGGGGTGACCTaGGCATTGTTGATTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SCVHVFSSFSSQKIFNIDEPGVT*ALLIAA
Trigger: GGCTGCAATCAACAATGCCAAGGTCACCCCTGGTTC...GTCTATGTTGAAAATTTTCTGGGAGCTAAATGATGAGAACACATGGACACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp AGATTACTGATTTTCCCACACAAATTTGTGAGTGGACTCAGACAAAACTTGCATGAACCAGGGGTGACCTaGGCATTGTTGATTGCAGCC +
Preference number: 5 (lower is better)
Translates to: RLLIFPHKFVSGLRQNLHEPGVT*ALLIAA
Trigger: GGCTGCAATCAACAATGCCAAGGTCACCCCTGGTTC...ATGCAAGTTTTGTCTGAGTCCACTCACAAATTTGTGTGGGAAAATCAGTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CAA 90 bp TTCATTAGGTCAAATGCCTCACTGATTTTGTCAAAAGGCAGGGTATGGGTCACCAATGCCTCACTGATTTaGTCAAAAGGCAGGGTATGG +
Preference number: 5 (lower is better)
Translates to: FIRSNASLILSKGRVWVTNASLI*SKGRVW
Trigger: CCATACCCTGCCTTTTGACAAAATCAGTGAGGCATT...GGTGACCCATACCCTGCCTTTTGACAAAATCAGTGAGGCATTTGACCTAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506705.5
ENST00000509471.5
CDS CCA 90 bp GCAACTCGAAGTGTGGTCCTCGGACAAGCATTTATTCACATCACTTaGGAATTTGTTAGAGATGAAAGCCCTGCCTCAAATCCACTAAAT +
Preference number: 5 (lower is better)
Translates to: ATRSVVLGQAFIHIT*EFVRDESPASNPLN
Trigger: ATTTAGTGGATTTGAGGCAGGGCTTTCATCTCTAACAAATTCCCAAGTGATGTGAATAAATGCTTGTCCGAGGACCACACTTCGAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000505590.5
ENST00000506705.5
ENST00000508393.5
ENST00000512499.5
CDS-3UTR CAA 90 bp TCATGTGTCCATGTGTTCTCATCATTTAGCTCCCAGAAAATTTTCAACATAGACTCACCTGGTTTGACGTaGGTCACTCCTGGCCCAATA +
Preference number: 5 (lower is better)
Translates to: SCVHVFSSFSSQKIFNIDSPGLT*VTPGPI
Trigger: TATTGGGCCAGGAGTGACCAACGTCAAACCAGGTGA...GTCTATGTTGAAAATTTTCTGGGAGCTAAATGATGAGAACACATGGACACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp GCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTAGCTATTCTTTCTATTTTGGCAAGATaGATATCTGACACCACAGTG +
Preference number: 5 (lower is better)
Translates to: AQIISSPRYEAQHPLAILSILAR*ISDTTV
Trigger: CACTGTGGTGTCAGATATCAATCTTGCCAAAATAGA...AAGAATAGCTAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp TGCTTTGCTGCACAGATCATCTCATCACCCAGGTATGAAGCCCAGCATCCATTAGCATCATCATCTATTTaGGCAAGATTGATATCTGAC +
Preference number: 5 (lower is better)
Translates to: CFAAQIISSPRYEAQHPLASSSI*ARLISD
Trigger: GTCAGATATCAATCTTGCCAAAATAGATGATGATGC...TAATGGATGCTGGGCTTCATACCTGGGTGATGAGATGATCTGTGCAGCAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp ATAACTTCCTGGATCGGTTTATGTAAGTCTCTAGGATTGAGGCAGTCAGTGGCTTCTATTTTGGCAAGATaGATATCTGACACCACAGTG +
Preference number: 5 (lower is better)
Translates to: ITSWIGLCKSLGLRQSVASILAR*ISDTTV
Trigger: CACTGTGGTGTCAGATATCAATCTTGCCAAAATAGA...AGCCACTGACTGCCTCAATCCTAGAGACTTACATAAACCGATCCAGGAAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CAA 90 bp ATGAGGATTGTTCGGACGCTTTTTCCTTGGTTCATTAGGTCAAATGCCTCACTGAAATCCACACCTCCCTaGGTCAATTCAATGATAACT +
Preference number: 5 (lower is better)
Translates to: MRIVRTLFPWFIRSNASLKSTPP*VNSMIT
Trigger: AGTTATCATTGAATTGACCAAGGGAGGTGTGGATTT...CAGTGAGGCATTTGACCTAATGAACCAAGGAAAAAGCGTCCGAACAATCCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509471.5
CDS GCA 90 bp TTATTCACATCACTTGGGAATTTGTTAGAGATGAAAGCCCTGCTTTaGCCTTGGTGCCCATTTTTCTTTGGGAAACTGTGTTGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: LFTSLGNLLEMKALL*PWCPFFFGKLCWKF
Trigger: AAACTTCCAACACAGTTTCCCAAAGAAAAATGGGCACCAAGGGCAAAGCAGGGCTTTCATCTCTAACAAATTCCCAAGTGATGTGAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504894.1
CDS-3UTR CAA 90 bp ATGATAACTTCCTGGATCGGTTTATGTAAGTCTCTAGGATTGAGGCAGTCAGTGGGACTCAGACAAAACTaGCATTTTCTACATAGAGGT +
Preference number: 5 (lower is better)
Translates to: MITSWIGLCKSLGLRQSVGLRQN*HFLHRG
Trigger: ACCTCTATGTAGAAAATGCAAGTTTTGTCTGAGTCC...CACTGACTGCCTCAATCCTAGAGACTTACATAAACCGATCCAGGAAGTTATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CAA 90 bp TCATGTGTCCATGTGTTCTCATCATTTAGCTCCCAGAAAATTTTCAACATAGACAATGCCTCACTGATTTaGTCAAAAGGCAGGGTATGG +
Preference number: 5 (lower is better)
Translates to: SCVHVFSSFSSQKIFNIDNASLI*SKGRVW
Trigger: CCATACCCTGCCTTTTGACAAAATCAGTGAGGCATT...GTCTATGTTGAAAATTTTCTGGGAGCTAAATGATGAGAACACATGGACACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp CATCCAAGCAGACAAACTCTCTCTAAATTTGCATCATCATCTATTTTGGCAAGAAAAATAGTCAATCCTTaGCTACCAGCAGCTACTCCA +
Preference number: 5 (lower is better)
Translates to: HPSRQTLSKFASSSILARKIVNP*LPAATP
Trigger: TGGAGTAGCTGCTGGTAGCAAAGGATTGACTATTTT...TCTTGCCAAAATAGATGATGATGCAAATTTAGAGAGAGTTTGTCTGCTTGGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CAA 90 bp CATCCAAGCAGACAAACTCTCTCTAAATTTGCATCATCATCTATTTTGGCAAGACAGGCGATGGCTGCTTaGCATTTAATAACCTTGATA +
Preference number: 5 (lower is better)
Translates to: HPSRQTLSKFASSSILARQAMAA*HLITLI
Trigger: TATCAAGGTTATTAAATGCAAAGCAGCCATCGCCTG...TCTTGCCAAAATAGATGATGATGCAAATTTAGAGAGAGTTTGTCTGCTTGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CAA 90 bp TTGCTGTTGACTATAGTCTCCCTGTTGTGCTATCAAATACCAGGTCTTATTCATCCACTAAATCAAAATTaGCTTACTTTGCCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: LLLTIVSLLCYQIPGLIHPLNQN*LTLPLV
Trigger: CACCAAGGGCAAAGTAAGCAAATTTTGATTTAGTGG...ATGAATAAGACCTGGTATTTGATAGCACAACAGGGAGACTATAGTCAACAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508393.5
CDS-3UTR CAA 90 bp TCATGTGTCCATGTGTTCTCATCATTTAGCTCCCAGAAAATTTTCAACATAGACGGACTCAGACAAAACTaGCATTTTCTACATAGAGGT +
Preference number: 5 (lower is better)
Translates to: SCVHVFSSFSSQKIFNIDGLRQN*HFLHRG
Trigger: ACCTCTATGTAGAAAATGCAAGTTTTGTCTGAGTCC...GTCTATGTTGAAAATTTTCTGGGAGCTAAATGATGAGAACACATGGACACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000508393.5
ENST00000629236.2
CDS-3UTR CAA 90 bp CCAAAGAATGTTCCATTTATAGTACGGCCGATTATTAGCTCCTCTGGAAAAATATCACTAGCAGGACTTTaGAGATTACTGATTTTCCCA +
Preference number: 5 (lower is better)
Translates to: PKNVPFIVRPIISSSGKISLAGL*RLLIFP
Trigger: TGGGAAAATCAGTAATCTCAAAAGTCCTGCTAGTGA...TATTTTTCCAGAGGAGCTAATAATCGGCCGTACTATAAATGGAACATTCTTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506705.5
CDS-3UTR CAA 90 bp TCATGTGTCCATGTGTTCTCATCATTTAGCTCCCAGAAAATTTTCAACATAGACTTGCATTTAATAACTTaGCCCTTGGTGCCCATTTTT +
Preference number: 5 (lower is better)
Translates to: SCVHVFSSFSSQKIFNIDLHLIT*PLVPIF
Trigger: AAAAATGGGCACCAAGGGCAAAGTTATTAAATGCAA...GTCTATGTTGAAAATTTTCTGGGAGCTAAATGATGAGAACACATGGACACATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265512.12
ENST00000629236.2
CDS GCA 72 bp AATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTaGTTTGCATTTAATAACTTTGCCCTTGGTGCCCAT +
Preference number: 6 (lower is better)
Translates to: NAKGLACFPGDG*FAFNNFALGAH
Trigger: ATGGGCACCAAGGGCAAAGTTATTAAATGCAAAGCAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000504125.1
ENST00000629236.2
CDS CAA 72 bp CAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTGCTTaGCATTTAATAACTTTGCCCTTGGTGCCCATTTTT +
Preference number: 6 (lower is better)
Translates to: QRGLPASQAMAA*HLITLPLVPIF
Trigger: AAAAATGGGCACCAAGGGCAAAGTTATTAAATGCAAAGCAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265512.12
ENST00000504125.1
ENST00000629236.2
CDS GCA 72 bp AATGCAAAGGGGCTTGCCTGCTTCCCAGGCGATGGCTaGTTTGCATTTAATAACCTGAGTCAGATAATTGCT +
Preference number: 6 (lower is better)
Translates to: NAKGLACFPGDG*FAFNNLSQIIA
Trigger: AGCAATTATCTGACTCAGGTTATTAAATGCAAAGCAGCCATCGCCTGGGAAGCAGGCAAGCCCCTTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503944.5
ENST00000505590.5
ENST00000508393.5
ENST00000512499.5
CDS GCA 72 bp AATCTACACTTTTCCAACCATGGTTTCAGATCCACCTaGACAGTCAAGGGCAAAATCCACACCTCCCTTGGT +
Preference number: 6 (lower is better)
Translates to: NLHFSNHGFRST*TVKGKIHTSLG
Trigger: ACCAAGGGAGGTGTGGATTTTGCCCTTGACTGTGCAGGTGGATCTGAAACCATGGTTGGAAAAGTGTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509471.5
CDS GCA 72 bp AGGCAGGTTCACATTCAATCAGATAGTATTCTGAATTaGTCCTGGCATCTAAAGATGAGGATTGTTCGGACG +
Preference number: 6 (lower is better)
Translates to: RQVHIQSDSILN*SWHLKMRIVRT
Trigger: CGTCCGAACAATCCTCATCTTTAGATGCCAGGAGCAATTCAGAATACTATCTGATTGAATGTGAACCTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629236.2
CDS CCA 72 bp AGTGTGGTCCTCGGACAAGCATTTATTCACATCACTTaGGAATTTGTTAGAGATGAAAGCCCTGCCTCAAAT +
Preference number: 6 (lower is better)
Translates to: SVVLGQAFIHIT*EFVRDESPASN
Trigger: ATTTGAGGCAGGGCTTTCATCTCTAACAAATTCCCAAGTGATGTGAATAAATGCTTGTCCGAGGACCACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000505590.5
ENST00000506705.5
ENST00000508393.5
ENST00000512499.5
CDS CAA 72 bp GATGAAAGCCCTGCCTCAAATCCACTAAATCAAAATTaGCTTACTTTGCCCTTGGTGCCCATTTTTCTTTGG +
Preference number: 6 (lower is better)
Translates to: DESPASNPLNQN*LTLPLVPIFLW
Trigger: CCAAAGAAAAATGGGCACCAAGGGCAAAGTAAGCAAATTTTGATTTAGTGGATTTGAGGCAGGGCTTTCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508393.5
CDS CAA 90 bp TTTATTCACATCACTTGGGAATTTGTTAGAGATGAAAGCCCTGCTTaGCCCTTGGTGCCCATTTTTCTTTGGGAAACTGTGTTGGAAGTT +
Preference number: 6 (lower is better)
Translates to: FIHITWEFVRDESPA*PLVPIFLWETVLEV
Trigger: AACTTCCAACACAGTTTCCCAAAGAAAAATGGGCACCAAGGGCAAAGCAGGGCTTTCATCTCTAACAAATTCCCAAGTGATGTGAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504894.1
CDS CAA 90 bp GATGAAAGCCCTGCCTCAAATCCACTAAATCAAAATTTGCTTACTTaGCCCTTGGTGCCCATTTTTCTTTGGGAAACTGTGTTGGAAGTT +
Preference number: 6 (lower is better)
Translates to: DESPASNPLNQNLLT*PLVPIFLWETVLEV
Trigger: AACTTCCAACACAGTTTCCCAAAGAAAAATGGGCACCAAGGGCAAAGTAAGCAAATTTTGATTTAGTGGATTTGAGGCAGGGCTTTCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508393.5
CDS CAA 90 bp TTTGTTAGAGATGAAAGCCCTGCCTCAAATCCACTAAATCAAAATTaGCTTACTTTGCCCTTGGTGCCCATTTTTCTTTGGGAAACTGTG +
Preference number: 6 (lower is better)
Translates to: FVRDESPASNPLNQN*LTLPLVPIFLWETV
Trigger: CACAGTTTCCCAAAGAAAAATGGGCACCAAGGGCAAAGTAAGCAAATTTTGATTTAGTGGATTTGAGGCAGGGCTTTCATCTCTAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508393.5
CDS CCA 72 bp ATGTCTCAAGTTTTTCCCTCTGAGTCAGATAATTGCTaGAGAATAGATGTGTTTTACATCTCTGCAACTCGA +
Preference number: 6 (lower is better)
Translates to: MSQVFPSESDNC*RIDVFYISATR
Trigger: TCGAGTTGCAGAGATGTAAAACACATCTATTCTCCAGCAATTATCTGACTCAGAGGGAAAAACTTGAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5
CDS CCA 72 bp GTTCACATTCAATCAGATAGTATTCTGAATTGCTCCTaGCATCTAAAGATGAGGATTGTTCGGACGCTTTTT +
Preference number: 6 (lower is better)
Translates to: VHIQSDSILNCS*HLKMRIVRTLF
Trigger: AAAAAGCGTCCGAACAATCCTCATCTTTAGATGCCAGGAGCAATTCAGAATACTATCTGATTGAATGTGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629236.2
CDS CAA 90 bp GTCTGTTTGATTACAAAGTTCATGTTTGCTGTCAAATTGCTGATCTaGAAAGTTTTAGGATGTTCGATGAAATTTGGGCTTTGTAGTCTC +
Preference number: 6 (lower is better)
Translates to: VCLITKFMFAVKLLI*KVLGCSMKFGLCSL
Trigger: GAGACTACAAAGCCCAAATTTCATCGAACATCCTAAAACTTTCAAGATCAGCAATTTGACAGCAAACATGAACTTTGTAATCAAACAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504581.1
CDS GCA 72 bp ATAATGTCTCAAGTTTTTCCCTCTGAGTCAGATAATTaGTGGAGAATAGATGTGTTTTACATCTCTGCAACT +
Preference number: 6 (lower is better)
Translates to: IMSQVFPSESDN*WRIDVFYISAT
Trigger: AGTTGCAGAGATGTAAAACACATCTATTCTCCAGCAATTATCTGACTCAGAGGGAAAAACTTGAGACATTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504894.1
ENST00000506705.5