RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000150471

Ensembl transcript IDs: ENST00000502815.1, ENST00000504896.5, ENST00000506700.5, ENST00000506720.5, ENST00000506746.5, ENST00000507164.5, ENST00000507625.5, ENST00000508078.1, ENST00000508693.5, ENST00000508946.5, ENST00000509089.1, ENST00000509779.5, ENST00000509896.5, ENST00000511324.5, ENST00000512091.6, ENST00000514157.5, ENST00000514591.5, ENST00000514996.5, ENST00000683033.1

Found 2288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTaGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGG +
Preference number: 1 (lower is better)
Translates to: ALTVVLGDPPSGIMV*LVVLGGVYSWGQQR
Trigger: CCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR CCA 90 bp CATGCTTTTGTAGTAAACATCTTCGGCATCACCACATTTGGCCGGTaGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGC +
Preference number: 1 (lower is better)
Translates to: HAFVVNIFGITTFGR*GFGLGAGGNTLCGG
Trigger: GCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGCCGAAGATGTTTACTACAAAAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR CCA 90 bp GGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTCTCGGTaGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCAT +
Preference number: 1 (lower is better)
Translates to: GGSAFWYNGVAGGSR*SILLGAAKEHQIPH
Trigger: ATGAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR CCA 90 bp GCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTaGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTG +
Preference number: 1 (lower is better)
Translates to: AKGKSSHCGLGGSAF*YNGVAGGSRWSILL
Trigger: CAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR TCA 90 bp GTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCATaGATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTG +
Preference number: 1 (lower is better)
Translates to: VEYTLGGSKGASDSS*MSSRPKLSSWLNEV
Trigger: CACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCATGAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR CCA 90 bp TCTGGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTaGGGGCAGCAAAGGAGCATCAGATTCCTCATGAATGAGTTCCAG +
Preference number: 1 (lower is better)
Translates to: SGIMVWLVVLGGVYS*GQQRSIRFLMNEFQ
Trigger: CTGGAACTCATTCATGAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR TCA 90 bp TCTTTTTCTCTAGGGCGGTCTCGTTATGGTTATAGCCACGGTCTATaGTTTGCACACAGTTGCTCAGGTATTCGCCGCTGGCAATGCTGT +
Preference number: 1 (lower is better)
Translates to: SFSLGRSRYGYSHGL*FAHSCSGIRRWQCC
Trigger: ACAGCATTGCCAGCGGCGAATACCTGAGCAACTGTGTGCAAATCATAGACCGTGGCTATAACCATAACGAGACCGCCCTAGAGAAAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR GCA 90 bp AAGTATGCAGCTGATGGACGTGGTTTCTGGAGCCTAGGTTTGGCATaGTTTTGTAGTAAACATCTTCGGCATCACCACATTTGGCCGGTG +
Preference number: 1 (lower is better)
Translates to: KYAADGRGFWSLGLA*FCSKHLRHHHIWPV
Trigger: CACCGGCCAAATGTGGTGATGCCGAAGATGTTTACTACAAAAGCATGCCAAACCTAGGCTCCAGAAACCACGTCCATCAGCTGCATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR CCA 90 bp CGCGACCTAGCTGGTAGTAAGTATGCAGCTGATGGACGTGGTTTCTaGAGCCTAGGTTTGGCATGCTTTTGTAGTAAACATCTTCGGCAT +
Preference number: 1 (lower is better)
Translates to: RDLAGSKYAADGRGF*SLGLACFCSKHLRH
Trigger: ATGCCGAAGATGTTTACTACAAAAGCATGCCAAACCTAGGCTCCAGAAACCACGTCCATCAGCTGCATACTTACTACCAGCTAGGTCGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR TCA 90 bp GTTGGTTCCAATTTCTGTGTCATCTTCTATAGACTAGTGACCAAATaGGCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTG +
Preference number: 1 (lower is better)
Translates to: VGSNFCVIFYRLVTK*AGPFELPSGGVPSL
Trigger: CAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGCTCATTTGGTCACTAGTCTATAGAAGATGACACAGAAATTGGAACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR GCA 90 bp ACGAGGTGGCATCATCCAGGACAATGGCATCATCTTCCCTTCCACTaGCAAGGTTATTCACCAGCTTGTTCATCAGATTCCTGTTCTGTT +
Preference number: 1 (lower is better)
Translates to: TRWHHPGQWHHLPFH*QGYSPACSSDSCSV
Trigger: AACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGTGGAAGGGAAGATGATGCCATTGTCCTGGATGATGCCACCTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR GCA 90 bp ATCATAGCTAGTGTCCTGGTGATGAACTGCTTGCCAAATATGCTTTaGATTACAACAGACGTGCCCTGTAAACATAAAAGTTTGTCCTGC +
Preference number: 1 (lower is better)
Translates to: IIASVLVMNCLPNML*ITTDVPCKHKSLSC
Trigger: GCAGGACAAACTTTTATGTTTACAGGGCACGTCTGTTGTAATGCAAAGCATATTTGGCAAGCAGTTCATCACCAGGACACTAGCTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR GCA 90 bp CACCTTTTGACTTCTAGAATCATAGCTAGTGTCCTGGTGATGAACTaGTTGCCAAATATGCTTTGCATTACAACAGACGTGCCCTGTAAA +
Preference number: 1 (lower is better)
Translates to: HLLTSRIIASVLVMN*LPNMLCITTDVPCK
Trigger: TTTACAGGGCACGTCTGTTGTAATGCAAAGCATATTTGGCAAGCAGTTCATCACCAGGACACTAGCTATGATTCTAGAAGTCAAAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR TCA 90 bp ACTTTATATGCTGAATGTTCTTCTGCACCAGTTTGTGTATTCAAGTaGTCTTTCTTCAGTTTGGTCTATGTAGAGCTTGAGAAGCTACCT +
Preference number: 1 (lower is better)
Translates to: TLYAECSSAPVCVFK*SFFSLVYVELEKLP
Trigger: AGGTAGCTTCTCAAGCTCTACATAGACCAAACTGAAGAAAGATCACTTGAATACACAAACTGGTGCAGAAGAACATTCAGCATATAAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR GCA 90 bp ATGATTTTGTGCTTAGCTTATTCATCTAGGCAGATTGATTTCTTTTaGATGGCTCATTTGGGCCACAGAGGATTAGCAAAGTTTATGTAT +
Preference number: 1 (lower is better)
Translates to: MILCLAYSSRQIDFF*MAHLGHRGLAKFMY
Trigger: ATACATAAACTTTGCTAATCCTCTGTGGCCCAAATGAGCCATGCAAAAGAAATCAATCTGCCTAGATGAATAAGCTAAGCACAAAATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR CCA 90 bp AGTTTGCTAACTTGTTTGGTTTCTGCTCTTCCGTTGTTCATATTGTaGTTGAAGAGACTTGTTTATCCCAATAGAGATTTGTTCATGTAT +
Preference number: 1 (lower is better)
Translates to: SLLTCLVSALPLFIL*LKRLVYPNRDLFMY
Trigger: ATACATGAACAAATCTCTATTGGGATAAACAAGTCTCTTCAACCACAATATGAACAACGGAAGAGCAGAAACCAAACAAGTTAGCAAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGGGGGGATCCGCCTTCTaGTATAATGGTGTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRGGSAF*YNGVAG
Trigger: ACCAGCCACACCATTATACCAGAAGGCGGATCCCCC...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCGGTGGAGTATACTCTTaGGGGCAGCAAAGGAGCATC +
Preference number: 2 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSGGVYS*GQQRSI
Trigger: GATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACC...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR TCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCAGAGTCTCTATGGGGTaGCTGGAGATCTTCTGTGTG +
Preference number: 2 (lower is better)
Translates to: VWVLVVTLSVAATPASVGRVSMG*LEIFCV
Trigger: CACACAGAAGATCTCCAGTCACCCCATAGAGACTCT...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCCCCAAACTCTCCTCGTaGTTAAACGAGGTGGCATCA +
Preference number: 2 (lower is better)
Translates to: VWVLVVTLSVAATPASVGPKLSS*LNEVAS
Trigger: TGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGG...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTGGTGGAGTATACTCTTaGGGGCAGCAAAGGAGCATC +
Preference number: 2 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGGGVYS*GQQRSI
Trigger: GATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACC...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCGCTGGTGGTTCTCGGTaGAGTATACTCTTGGGGGCA +
Preference number: 2 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLAGGSR*SILLGA
Trigger: TGCCCCCAAGAGTATACTCCACCGAGAACCACCAGC...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCGGGGGATCCGCCTTCTaGTATAATGGTGTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLGGSAF*YNGVAG
Trigger: ACCAGCCACACCATTATACCAGAAGGCGGATCCCCC...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGTCTCTATGGGGTGACTaGAGATCTTCTGTGTGCTCG +
Preference number: 2 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRSLWGD*RSSVCS
Trigger: CGAGCACACAGAAGATCTCCAGTCACCCCATAGAGA...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR TCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCGCATCAGATTCCTCATaGATGAGTTCCAGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: VWVLVVTLSVAATPASVGASDSS*MSSRPK
Trigger: TTTGGGCCTGGAACTCATTCATGAGGAATCTGATGC...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCCATCTTCCCTTCCACTaGCAAGGTTATTCACCAGCT +
Preference number: 2 (lower is better)
Translates to: VWVLVVTLSVAATPASVGHLPFH*QGYSPA
Trigger: AGCTGGTGAATAACCTTGGCAGTGGAAGGGAAGATG...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCTGGAGATCTTCTGTGTaGTCGTTGGTTAGCAAAGGG +
Preference number: 2 (lower is better)
Translates to: VWVLVVTLSVAATPASVGWRSSV*SLVSKG
Trigger: CCCTTTGCTAACCAACGAGCACACAGAAGATCTCCA...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR GCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCCAGCCAGTGTCGGCATaGTGGTATAGAGAGAGTCTC +
Preference number: 2 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLQPVSA*WYRESL
Trigger: GAGACTCTCTCTATACCAGCATGCCGACACTGGCTG...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGTCAGGTATTCGCCGCTaGCAATGCTGTAACTATTGC +
Preference number: 2 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRSGIRR*QCCNYC
Trigger: GCAATAGTTACAGCATTGCCAGCGGCGAATACCTGA...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTGCTGGTGGTTCTCGGTaGAGTATACTCTTGGGGGCA +
Preference number: 2 (lower is better)
Translates to: HSLWRPHQPVSACWYRESAGGSR*SILLGA
Trigger: TGCCCCCAAGAGTATACTCCACCGAGAACCACCAGC...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTTCTGGTATAATGGTGTaGCTGGTGGTTCTCGGTGGA +
Preference number: 2 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGSGIMV*LVVLGG
Trigger: TCCACCGAGAACCACCAGCCACACCATTATACCAGA...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTAAAAAGCTCTCACTGTaGTCTTGGGGGATCCGCCTT +
Preference number: 2 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGKKLSL*SWGIRL
Trigger: AAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTT...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR TCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCTATAGCCACGGTCTATaGTTTGCACACAGTTGCTCA +
Preference number: 2 (lower is better)
Translates to: VWVLVVTLSVAATPASVGYSHGL*FAHSCS
Trigger: TGAGCAACTGTGTGCAAATCATAGACCGTGGCTATA...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCCCACGGTCTATGATTTaGACACAGTTGCTCAGGTAT +
Preference number: 2 (lower is better)
Translates to: VWVLVVTLSVAATPASVGPRSMI*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATCATAGACCGTGG...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCGGTGGAGTATACTCTTaGGGGCAGCAAAGGAGCATC +
Preference number: 2 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVGGVYS*GQQRSI
Trigger: GATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACC...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCAAAAAGCTCTCACTGTaGTCTTGGGGGATCCGCCTT +
Preference number: 2 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLKKLSL*SWGIRL
Trigger: AAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTT...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCCTTCTGTGTGCTCGTTaGTTAGCAAAGGGAAAAAGC +
Preference number: 2 (lower is better)
Translates to: VWVLVVTLSVAATPASVGLLCAR*LAKGKS
Trigger: GCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAG...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR GCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCCATCTTCCCTTCCACTaGCAAGGTTATTCACCAGCT +
Preference number: 2 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLHLPFH*QGYSPA
Trigger: AGCTGGTGAATAACCTTGGCAGTGGAAGGGAAGATG...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTTCTGGTATAATGGTGTaGCTGGTGGTTCTCGGTGGA +
Preference number: 2 (lower is better)
Translates to: HSLWRPHQPVSACWYRESSGIMV*LVVLGG
Trigger: TCCACCGAGAACCACCAGCCACACCATTATACCAGA...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCTCTGGTATAATGGTGTaGCTGGTGGTTCTCGGTGGA +
Preference number: 2 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVSGIMV*LVVLGG
Trigger: TCCACCGAGAACCACCAGCCACACCATTATACCAGA...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTAAAAAGCTCTCACTGTaGTCTTGGGGGATCCGCCTT +
Preference number: 2 (lower is better)
Translates to: HSLWRPHQPVSACWYRESKKLSL*SWGIRL
Trigger: AAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTT...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCCCAGTGTCGGCATGCTaGTATAGAGAGAGTCTCTAT +
Preference number: 2 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLPVSAC*YRESLY
Trigger: ATAGAGACTCTCTCTATACCAGCATGCCGACACTGG...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR TCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTATAGCCACGGTCTATaGTTTGCACACAGTTGCTCA +
Preference number: 2 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLYSHGL*FAHSCS
Trigger: TGAGCAACTGTGTGCAAATCATAGACCGTGGCTATA...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR GCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCATCTTCCCTTCCACTaGCAAGGTTATTCACCAGCT +
Preference number: 2 (lower is better)
Translates to: HSLWRPHQPVSACWYRESHLPFH*QGYSPA
Trigger: AGCTGGTGAATAACCTTGGCAGTGGAAGGGAAGATG...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR GCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCTTCCCTTCCACTaGCAAGGTTATTCACCAGCT +
Preference number: 2 (lower is better)
Translates to: NGVAGGSRWSILLGAAKEHLPFH*QGYSPA
Trigger: AGCTGGTGAATAACCTTGGCAGTGGAAGGGAAGATG...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTTCCTGTTCTGTTCACTaGAGCGCTCATGGTTGTTCA +
Preference number: 2 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTSCSVH*SAHGCS
Trigger: TGAACAACCATGAGCGCTCCAGTGAACAGAACAGGA...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCCCAAACTCTCCTCGTaGTTAAACGAGGTGGCATCA +
Preference number: 2 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRPKLSS*LNEVAS
Trigger: TGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGG...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR TCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTTATAGCCACGGTCTATaGTTTGCACACAGTTGCTCA +
Preference number: 2 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVYSHGL*FAHSCS
Trigger: TGAGCAACTGTGTGCAAATCATAGACCGTGGCTATA...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR GCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAACATCTTCCCTTCCACTaGCAAGGTTATTCACCAGCT +
Preference number: 2 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQHLPFH*QGYSPA
Trigger: AGCTGGTGAATAACCTTGGCAGTGGAAGGGAAGATG...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCTCAGGTATTCGCCGCTaGCAATGCTGTAACTATTGC +
Preference number: 2 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRSGIRR*QCCNYC
Trigger: GCAATAGTTACAGCATTGCCAGCGGCGAATACCTGA...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR TCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAACTTTCTCCCCTGGGCTaGCCTAAAAATCCCATTAAA +
Preference number: 2 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQLSPLG*PKNPIK
Trigger: TTTAATGGGATTTTTAGGTCAGCCCAGGGGAGAAAG...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000506700.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
3UTR-3UTR GCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGCATCTTCCCTTCCACTaGCAAGGTTATTCACCAGCT +
Preference number: 2 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLHLPFH*QGYSPA
Trigger: AGCTGGTGAATAACCTTGGCAGTGGAAGGGAAGATG...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCTCCTGTTCTGTTCACTaGAGCGCTCATGGTTGTTCA +
Preference number: 2 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIISCSVH*SAHGCS
Trigger: TGAACAACCATGAGCGCTCCAGTGAACAGAACAGGA...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR CAA 90 bp ACAATGGCATCATCTTCCCTTCCACTGCCAAGGTTATTCACCAGCTaGTTCATCAGATTCCTGTTCTGTTCACTGGAGCGCTCATGGTTG +
Preference number: 2 (lower is better)
Translates to: TMASSSLPLPRLFTS*FIRFLFCSLERSWL
Trigger: CAACCATGAGCGCTCCAGTGAACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGTGGAAGGGAAGATGATGCCATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp AGAAAGGAAGGAAACTTTGCTCTCTTACTGGTAGACAAACTTGCAAGACCAGCAGGGGGATCCGCCTTCTaGTATAATGGTGTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: RKEGNFALLLVDKLARPAGGSAF*YNGVAG
Trigger: ACCAGCCACACCATTATACCAGAAGGCGGATCCCCC...TGCTGGTCTTGCAAGTTTGTCTACCAGTAAGAGAGCAAAGTTTCCTTCCTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR-3UTR CCA 90 bp TCAACTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCAATTTCTGTGGTGGGGGTTCGGTCTaGGTGCTGGTGGTAACACTC +
Preference number: 2 (lower is better)
Translates to: STQNSQQGVSSFVGSNFCGGGSV*VLVVTL
Trigger: GAGTGTTACCACCAGCACCCAGACCGAACCCCCACC...ACAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR CAA 90 bp GGTAGTAAGTATGCAGCTGATGGACGTGGTTTCTGGAGCCTAGGTTaGGCATGCTTTTGTAGTAAACATCTTCGGCATCACCACATTTGG +
Preference number: 2 (lower is better)
Translates to: GSKYAADGRGFWSLG*ACFCSKHLRHHHIW
Trigger: CCAAATGTGGTGATGCCGAAGATGTTTACTACAAAAGCATGCCAAACCTAGGCTCCAGAAACCACGTCCATCAGCTGCATACTTACTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR TCA 90 bp CTCTATGGGGTGACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAACTTTCTCCCCTGGGCTaGCCTAAAAATCCCATTAAA +
Preference number: 2 (lower is better)
Translates to: LYGVTGDLLCARWLAKGKLSPLG*PKNPIK
Trigger: TTTAATGGGATTTTTAGGTCAGCCCAGGGGAGAAAG...TTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGTCACCCCATAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000506700.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
3UTR-3UTR TCA 90 bp TGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTATAGCCACGGTCTATaGTTTGCACACAGTTGCTCA +
Preference number: 2 (lower is better)
Translates to: WRSSVCSLVSKGKKLSLWYSHGL*FAHSCS
Trigger: TGAGCAACTGTGTGCAAATCATAGACCGTGGCTATA...CCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR GCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGCAAGGCCACAATGAGTaGCATTTTCTTCATATCTTG +
Preference number: 2 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLQGHNE*HFLHIL
Trigger: CAAGATATGAAGAAAATGGCACTCATTGTGGCCTTG...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR-3UTR CCA 90 bp ACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTTCAGGTATTCGCCGCTaGCAATGCTGTAACTATTGC +
Preference number: 2 (lower is better)
Translates to: TGDLLCARWLAKGKSSHCSGIRR*QCCNYC
Trigger: GCAATAGTTACAGCATTGCCAGCGGCGAATACCTGA...ACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CCA 90 bp AGTGAATTTCCTCTAAAAAGTGGTAGTGCAGGTGCCCACTTGTTGATCAGACTGAAAAAGCTCTCACTGTaGTCTTGGGGGATCCGCCTT +
Preference number: 2 (lower is better)
Translates to: SEFPLKSGSAGAHLLIRLKKLSL*SWGIRL
Trigger: AAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTT...CAGTCTGATCAACAAGTGGGCACCTGCACTACCACTTTTTAGAGGAAATTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR CAA 90 bp GGGAGTGAATTTCCTCTAAAAAGTGGTAGTGCAGGTGCCCACTTGTaGATCAGACTGAGCATTCAGCACTTTAATGCCTATGGAAAACCG +
Preference number: 2 (lower is better)
Translates to: GSEFPLKSGSAGAHL*IRLSIQHFNAYGKP
Trigger: CGGTTTTCCATAGGCATTAAAGTGCTGAATGCTCAGTCTGATCAACAAGTGGGCACCTGCACTACCACTTTTTAGAGGAAATTCACTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR CAA 90 bp CGAGGGAGTGAATTTCCTCTAAAAAGTGGTAGTGCAGGTGCCCACTaGTTGATCAGACTGAGCATTCAGCACTTTAATGCCTATGGAAAA +
Preference number: 2 (lower is better)
Translates to: RGSEFPLKSGSAGAH*LIRLSIQHFNAYGK
Trigger: TTTTCCATAGGCATTAAAGTGCTGAATGCTCAGTCTGATCAACAAGTGGGCACCTGCACTACCACTTTTTAGAGGAAATTCACTCCCTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR-3UTR TCA 90 bp AGTGTCCTGGTGATGAACTGCTTGCCAAATATGCTTTGCATTACAACAGACGTGCTTTCTCCCCTGGGCTaGCCTAAAAATCCCATTAAA +
Preference number: 2 (lower is better)
Translates to: SVLVMNCLPNMLCITTDVLSPLG*PKNPIK
Trigger: TTTAATGGGATTTTTAGGTCAGCCCAGGGGAGAAAG...CACGTCTGTTGTAATGCAAAGCATATTTGGCAAGCAGTTCATCACCAGGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR-3UTR TCA 90 bp ACTGCCAAGGTTATTCACCAGCTTGTTCATCAGATTCCTGTTCTGTTCACTGGATATAGCCACGGTCTATaGTTTGCACACAGTTGCTCA +
Preference number: 2 (lower is better)
Translates to: TAKVIHQLVHQIPVLFTGYSHGL*FAHSCS
Trigger: TGAGCAACTGTGTGCAAATCATAGACCGTGGCTATA...TCCAGTGAACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR GCA 90 bp AGTGAATTTCCTCTAAAAAGTGGTAGTGCAGGTGCCCACTTGTTGATCAGACTGGTCCTGGTGATGAACTaGTTGCCAAATATGCTTTGC +
Preference number: 2 (lower is better)
Translates to: SEFPLKSGSAGAHLLIRLVLVMN*LPNMLC
Trigger: GCAAAGCATATTTGGCAAGCAGTTCATCACCAGGAC...CAGTCTGATCAACAAGTGGGCACCTGCACTACCACTTTTTAGAGGAAATTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR-3UTR GCA 90 bp ACTGCCAAGGTTATTCACCAGCTTGTTCATCAGATTCCTGTTCTGTTCACTGGACCACGGTCTATGATTTaGACACAGTTGCTCAGGTAT +
Preference number: 2 (lower is better)
Translates to: TAKVIHQLVHQIPVLFTGPRSMI*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATCATAGACCGTGG...TCCAGTGAACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR TCA 90 bp AGAAAGGAAGGAAACTTTGCTCTCTTACTGGTAGACAAACTTGCAAGACCAGCAGAGGTCATCCAACTTTaGGACCATACAAAATGGATC +
Preference number: 2 (lower is better)
Translates to: RKEGNFALLLVDKLARPAEVIQL*DHTKWI
Trigger: GATCCATTTTGTATGGTCTCAAAGTTGGATGACCTC...TGCTGGTCTTGCAAGTTTGTCTACCAGTAAGAGAGCAAAGTTTCCTTCCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR-3UTR GCA 90 bp AGTGAATTTCCTCTAAAAAGTGGTAGTGCAGGTGCCCACTTGTTGATCAGACTGACTGGTAGACAAACTTaGAAGACCAGCACAAAAGAA +
Preference number: 2 (lower is better)
Translates to: SEFPLKSGSAGAHLLIRLTGRQT*KTSTKE
Trigger: TTCTTTTGTGCTGGTCTTGCAAGTTTGTCTACCAGT...CAGTCTGATCAACAAGTGGGCACCTGCACTACCACTTTTTAGAGGAAATTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR-3UTR GCA 90 bp AGGGGATCTGTACTTGGACACTGCTATAAAGGATCTGCAGTAATGAGAGATCTACAGATTGATTTCTTTTaGATGGCTCATTTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: RGSVLGHCYKGSAVMRDLQIDFF*MAHLGH
Trigger: GTGGCCCAAATGAGCCATGCAAAAGAAATCAATCTG...TAGATCTCTCATTACTGCAGATCCTTTATAGCAGTGTCCAAGTACAGATCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR CAA 90 bp CTTTTGACTTCTAGAATCATAGCTAGTGTCCTGGTGATGAACTGCTaGCCAAATATGCTTTGCATTACAACAGACGTGCCCTGTAAACAT +
Preference number: 2 (lower is better)
Translates to: LLTSRIIASVLVMNC*PNMLCITTDVPCKH
Trigger: ATGTTTACAGGGCACGTCTGTTGTAATGCAAAGCATATTTGGCAAGCAGTTCATCACCAGGACACTAGCTATGATTCTAGAAGTCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR-3UTR TCA 90 bp TCAACTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCAATTTCTGTCTTTCTCCCCTGGGCTaGCCTAAAAATCCCATTAAA +
Preference number: 2 (lower is better)
Translates to: STQNSQQGVSSFVGSNFCLSPLG*PKNPIK
Trigger: TTTAATGGGATTTTTAGGTCAGCCCAGGGGAGAAAG...ACAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000502815.1
ENST00000506700.5
ENST00000506720.5
ENST00000506746.5
ENST00000508946.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514591.5
ENST00000514996.5
3UTR-3UTR TCA 90 bp TCAACTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCAATTTCTGTAGACTAGTGACCAAATaGGCCGGTCCTTTTGAACTT +
Preference number: 2 (lower is better)
Translates to: STQNSQQGVSSFVGSNFCRLVTK*AGPFEL
Trigger: AAGTTCAAAAGGACCGGCTCATTTGGTCACTAGTCT...ACAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR GCA 90 bp AGTGAATTTCCTCTAAAAAGTGGTAGTGCAGGTGCCCACTTGTTGATCAGACTGAGCCTAGGTTTGGCATaGTTTTGTAGTAAACATCTT +
Preference number: 2 (lower is better)
Translates to: SEFPLKSGSAGAHLLIRLSLGLA*FCSKHL
Trigger: AAGATGTTTACTACAAAAGCATGCCAAACCTAGGCT...CAGTCTGATCAACAAGTGGGCACCTGCACTACCACTTTTTAGAGGAAATTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR CAA 90 bp CACCTTACCATAAGTTTGCTAACTTGTTTGGTTTCTGCTCTTCCGTaGTTCATATTGTGGTTGAAGAGACTTGTTTATCCCAATAGAGAT +
Preference number: 2 (lower is better)
Translates to: HLTISLLTCLVSALP*FILWLKRLVYPNRD
Trigger: ATCTCTATTGGGATAAACAAGTCTCTTCAACCACAATATGAACAACGGAAGAGCAGAAACCAAACAAGTTAGCAAACTTATGGTAAGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR CAA 90 bp TTCGCACAAAAATGCTTCCATAAGCTATTGTGCAATGTTGCTGCTTaGCTTTTGTGCCATCTTCGTAATTTAATGATGTGCAGAAATCTA +
Preference number: 2 (lower is better)
Translates to: FAQKCFHKLLCNVAA*LLCHLRNLMMCRNL
Trigger: TAGATTTCTGCACATCATTAAATTACGAAGATGGCACAAAAGCAAAGCAGCAACATTGCACAATAGCTTATGGAAGCATTTTTGTGCGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR-3UTR TCA 90 bp AGGAACAGAAAGCAGACTATATGTGCAATGCTAGTATCTGTACATTACATAGAAACCAAAAACCCTATGTaGTACAGTTTTGCTTTGCTC +
Preference number: 2 (lower is better)
Translates to: RNRKQTICAMLVSVHYIETKNPM*YSFALL
Trigger: GAGCAAAGCAAAACTGTATCACATAGGGTTTTTGGT...TTCTATGTAATGTACAGATACTAGCATTGCACATATAGTCTGCTTTCTGTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR CAA 90 bp TTGCTAACTTGTTTGGTTTCTGCTCTTCCGTTGTTCATATTGTGGTaGAAGAGACTTGTTTATCCCAATAGAGATTTGTTCATGTATAGT +
Preference number: 2 (lower is better)
Translates to: LLTCLVSALPLFILW*KRLVYPNRDLFMYS
Trigger: ACTATACATGAACAAATCTCTATTGGGATAAACAAGTCTCTTCAACCACAATATGAACAACGGAAGAGCAGAAACCAAACAAGTTAGCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR CAA 90 bp ATAAGTTTGCTAACTTGTTTGGTTTCTGCTCTTCCGTTGTTCATATaGTGGTTGAAGAGACTTGTTTATCCCAATAGAGATTTGTTCATG +
Preference number: 2 (lower is better)
Translates to: ISLLTCLVSALPLFI*WLKRLVYPNRDLFM
Trigger: CATGAACAAATCTCTATTGGGATAAACAAGTCTCTTCAACCACAATATGAACAACGGAAGAGCAGAAACCAAACAAGTTAGCAAACTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR CAA 90 bp AATAGAGCTTTAAAAGGTACAAAGCTACTAAAAGCATTAACTCTGTaGGTGTTCAATAGAGCCAGCAGATTAGAGAGTGAAGATGAATTC +
Preference number: 2 (lower is better)
Translates to: NRALKGTKLLKALTL*VFNRASRLESEDEF
Trigger: GAATTCATCTTCACTCTCTAATCTGCTGGCTCTATTGAACACCAACAGAGTTAATGCTTTTAGTAGCTTTGTACCTTTTAAAGCTCTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR-3UTR CAA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCCGGTGGAGTATACTCTaGGGGGCAGCAAAGGAGCAT +
Preference number: 3 (lower is better)
Translates to: VWVLVVTLSVAATPASVGRWSIL*GAAKEH
Trigger: ATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCG...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CAA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCGCTCTCACTGTGGTCTaGGGGGATCCGCCTTCTGGT +
Preference number: 3 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVALTVV*GDPPSG
Trigger: ACCAGAAGGCGGATCCCCCAAGACCACAGTGAGAGC...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CAA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTTCGGCATCACCACATTaGGCCGGTGGGGGTTCGGTC +
Preference number: 3 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTSASPH*AGGGSV
Trigger: GACCGAACCCCCACCGGCCAAATGTGGTGATGCCGA...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CAA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTGCCACGGTCTATGATTaGCACACAGTTGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGATVYD*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATCATAGACCGTGGC...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CAA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCGCCACGGTCTATGATTaGCACACAGTTGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLATVYD*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATCATAGACCGTGGC...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CAA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGTCTTCTGTGTGCTCGTaGGTTAGCAAAGGGAAAAAG +
Preference number: 3 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRSSVCS*VSKGKK
Trigger: CTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGA...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CAA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCTCTTCTGTGTGCTCGTaGGTTAGCAAAGGGAAAAAG +
Preference number: 3 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSSSVCS*VSKGKK
Trigger: CTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGA...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR CCA 72 bp GTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTaGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGG +
Preference number: 3 (lower is better)
Translates to: VVLGDPPSGIMV*LVVLGGVYSWG
Trigger: CCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CAA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCGCCACGGTCTATGATTaGCACACAGTTGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVATVYD*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATCATAGACCGTGGC...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR CCA 72 bp GTAGTAAACATCTTCGGCATCACCACATTTGGCCGGTaGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTC +
Preference number: 3 (lower is better)
Translates to: VVNIFGITTFGR*GFGLGAGGNTL
Trigger: GAGAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGCCGAAGATGTTTACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CAA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTTCTGTGTGCTCGTaGGTTAGCAAAGGGAAAAAG +
Preference number: 3 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLSSVCS*VSKGKK
Trigger: CTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGA...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR CCA 72 bp GCCTTCTGGTATAATGGTGTGGCTGGTGGTTCTCGGTaGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAG +
Preference number: 3 (lower is better)
Translates to: AFWYNGVAGGSR*SILLGAAKEHQ
Trigger: CTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACCAGAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR CCA 72 bp AAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTaGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGT +
Preference number: 3 (lower is better)
Translates to: KSSHCGLGGSAF*YNGVAGGSRWS
Trigger: ACTCCACCGAGAACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CAA 90 bp CTCTATGGGGTGACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAGCTCTCACTGTGGTCTaGGGGGATCCGCCTTCTGGT +
Preference number: 3 (lower is better)
Translates to: LYGVTGDLLCARWLAKGKALTVV*GDPPSG
Trigger: ACCAGAAGGCGGATCCCCCAAGACCACAGTGAGAGC...TTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGTCACCCCATAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR TCA 72 bp CTAGGGCGGTCTCGTTATGGTTATAGCCACGGTCTATaGTTTGCACACAGTTGCTCAGGTATTCGCCGCTGG +
Preference number: 3 (lower is better)
Translates to: LGRSRYGYSHGL*FAHSCSGIRRW
Trigger: CCAGCGGCGAATACCTGAGCAACTGTGTGCAAATCATAGACCGTGGCTATAACCATAACGAGACCGCCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CAA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCGTGTTAGCAGTTTTGTaGGTTCCAATTTCTGTGTCA +
Preference number: 3 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLVLAVL*VPISVS
Trigger: TGACACAGAAATTGGAACCAACAAAACTGCTAACAC...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CAA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAGCCACGGTCTATGATTaGCACACAGTTGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQATVYD*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATCATAGACCGTGGC...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CAA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCGCCACGGTCTATGATTaGCACACAGTTGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRATVYD*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATCATAGACCGTGGC...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR TCA 72 bp ACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCATaGATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTA +
Preference number: 3 (lower is better)
Translates to: TLGGSKGASDSS*MSSRPKLSSWL
Trigger: TAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCATGAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR CCA 72 bp ATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTaGGGGCAGCAAAGGAGCATCAGATTCCTCATGAAT +
Preference number: 3 (lower is better)
Translates to: MVWLVVLGGVYS*GQQRSIRFLMN
Trigger: ATTCATGAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CAA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCAAAAAGTCTGAGAGTTaGTGTTTGTCTTTAGAGGAC +
Preference number: 3 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVKKSES*CLSLED
Trigger: GTCCTCTAAAGACAAACACAAACTCTCAGACTTTTT...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000506700.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
3UTR-3UTR CAA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTAAAAAGTCTGAGAGTTaGTGTTTGTCTTTAGAGGAC +
Preference number: 3 (lower is better)
Translates to: HSLWRPHQPVSACWYRESKKSES*CLSLED
Trigger: GTCCTCTAAAGACAAACACAAACTCTCAGACTTTTT...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000506700.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
3UTR CCA 72 bp TTTTTCCCTCTGCAATACATCACAGGCCAAGTGCTGTaGCTCAAACCTGTGATCATGGCTACGCAGAAGGCT +
Preference number: 3 (lower is better)
Translates to: FFPLQYITGQVL*LKPVIMATQKA
Trigger: AGCCTTCTGCGTAGCCATGATCACAGGTTTGAGCCACAGCACTTGGCCTGTGATGTATTGCAGAGGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR-3UTR CAA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTGTGTTAGCAGTTTTGTaGGTTCCAATTTCTGTGTCA +
Preference number: 3 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTVLAVL*VPISVS
Trigger: TGACACAGAAATTGGAACCAACAAAACTGCTAACAC...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR CCA 72 bp CTCTATGGGGTGACTGGAGATCTTCTGTGTGCTCGTTaGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTT +
Preference number: 3 (lower is better)
Translates to: LYGVTGDLLCAR*LAKGKSSHCGL
Trigger: AAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGTCACCCCATAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CAA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTAAAAAGTCTGAGAGTTaGTGTTTGTCTTTAGAGGAC +
Preference number: 3 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVKKSES*CLSLED
Trigger: GTCCTCTAAAGACAAACACAAACTCTCAGACTTTTT...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000506700.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
3UTR-3UTR CAA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCAAAAAGTCTGAGAGTTaGTGTTTGTCTTTAGAGGAC +
Preference number: 3 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLKKSES*CLSLED
Trigger: GTCCTCTAAAGACAAACACAAACTCTCAGACTTTTT...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000506700.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
3UTR-3UTR CAA 90 bp ACTGCCAAGGTTATTCACCAGCTTGTTCATCAGATTCCTGTTCTGTTCACTGGAGCCACGGTCTATGATTaGCACACAGTTGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: TAKVIHQLVHQIPVLFTGATVYD*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATCATAGACCGTGGC...TCCAGTGAACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CAA 90 bp AGTGAATTTCCTCTAAAAAGTGGTAGTGCAGGTGCCCACTTGTTGATCAGACTGGCCACGGTCTATGATTaGCACACAGTTGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: SEFPLKSGSAGAHLLIRLATVYD*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATCATAGACCGTGGC...CAGTCTGATCAACAAGTGGGCACCTGCACTACCACTTTTTAGAGGAAATTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR-3UTR CAA 90 bp TCAACTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCAATTTCTGTAATGAGCCGGTCCTTTaGAACTTCCCTCGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: STQNSQQGVSSFVGSNFCNEPVL*NFPREG
Trigger: CCCCTCCCGAGGGAAGTTCAAAAGGACCGGCTCATT...ACAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR TCA 72 bp AATTTCTGTGTCATCTTCTATAGACTAGTGACCAAATaGGCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTC +
Preference number: 3 (lower is better)
Translates to: NFCVIFYRLVTK*AGPFELPSGGV
Trigger: GACCCCTCCCGAGGGAAGTTCAAAAGGACCGGCTCATTTGGTCACTAGTCTATAGAAGATGACACAGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR GCA 72 bp CATCATCCAGGACAATGGCATCATCTTCCCTTCCACTaGCAAGGTTATTCACCAGCTTGTTCATCAGATTCC +
Preference number: 3 (lower is better)
Translates to: HHPGQWHHLPFH*QGYSPACSSDS
Trigger: GGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGTGGAAGGGAAGATGATGCCATTGTCCTGGATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR GCA 72 bp GCTGATGGACGTGGTTTCTGGAGCCTAGGTTTGGCATaGTTTTGTAGTAAACATCTTCGGCATCACCACATT +
Preference number: 3 (lower is better)
Translates to: ADGRGFWSLGLA*FCSKHLRHHHI
Trigger: AATGTGGTGATGCCGAAGATGTTTACTACAAAAGCATGCCAAACCTAGGCTCCAGAAACCACGTCCATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CAA 90 bp AGAAAGGAAGGAAACTTTGCTCTCTTACTGGTAGACAAACTTGCAAGACCAGCACTTGCCAAATATGCTTaGCATTACAACAGACGTGCC +
Preference number: 3 (lower is better)
Translates to: RKEGNFALLLVDKLARPALAKYA*HYNRRA
Trigger: GGCACGTCTGTTGTAATGCAAAGCATATTTGGCAAG...TGCTGGTCTTGCAAGTTTGTCTACCAGTAAGAGAGCAAAGTTTCCTTCCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR-3UTR CAA 90 bp AGTGTCCTGGTGATGAACTGCTTGCCAAATATGCTTTGCATTACAACAGACGTGCTGGTGATGAACTGCTaGCCAAATATGCTTTGCATT +
Preference number: 3 (lower is better)
Translates to: SVLVMNCLPNMLCITTDVLVMNC*PNMLCI
Trigger: AATGCAAAGCATATTTGGCAAGCAGTTCATCACCAG...CACGTCTGTTGTAATGCAAAGCATATTTGGCAAGCAGTTCATCACCAGGACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR TCA 72 bp ACAGCTATTCCAGCTGTGGTGAATTCAGGTTGTGAGTaGCCAAAAACCCTATGTGATACAGTTTTGCTTTGC +
Preference number: 3 (lower is better)
Translates to: TAIPAVVNSGCE*PKTLCDTVLLC
Trigger: GCAAAGCAAAACTGTATCACATAGGGTTTTTGGTCACTCACAACCTGAATTCACCACAGCTGGAATAGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR-3UTR CAA 90 bp AGAAAGGAAGGAAACTTTGCTCTCTTACTGGTAGACAAACTTGCAAGACCAGCAGCTTTGCTCTTATGTTaGTTTGTGCAGCACTCCAAT +
Preference number: 3 (lower is better)
Translates to: RKEGNFALLLVDKLARPAALLLC*FVQHSN
Trigger: ATTGGAGTGCTGCACAAACAAACATAAGAGCAAAGC...TGCTGGTCTTGCAAGTTTGTCTACCAGTAAGAGAGCAAAGTTTCCTTCCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR-3UTR CAA 90 bp ATCATAGCTAGTGTCCTGGTGATGAACTGCTTGCCAAATATGCTTTGCATTACATCTTCTGTGTGCTCGTaGGTTAGCAAAGGGAAAAAG +
Preference number: 3 (lower is better)
Translates to: IIASVLVMNCLPNMLCITSSVCS*VSKGKK
Trigger: CTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGA...TGTAATGCAAAGCATATTTGGCAAGCAGTTCATCACCAGGACACTAGCTATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR GCA 72 bp AGTGTCCTGGTGATGAACTGCTTGCCAAATATGCTTTaGATTACAACAGACGTGCCCTGTAAACATAAAAGT +
Preference number: 3 (lower is better)
Translates to: SVLVMNCLPNML*ITTDVPCKHKS
Trigger: ACTTTTATGTTTACAGGGCACGTCTGTTGTAATGCAAAGCATATTTGGCAAGCAGTTCATCACCAGGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR GCA 72 bp ACTTCTAGAATCATAGCTAGTGTCCTGGTGATGAACTaGTTGCCAAATATGCTTTGCATTACAACAGACGTG +
Preference number: 3 (lower is better)
Translates to: TSRIIASVLVMN*LPNMLCITTDV
Trigger: CACGTCTGTTGTAATGCAAAGCATATTTGGCAAGCAGTTCATCACCAGGACACTAGCTATGATTCTAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR-3UTR CAA 90 bp AGGGGATCTGTACTTGGACACTGCTATAAAGGATCTGCAGTAATGAGAGATCTAGTGTTAGCAGTTTTGTaGGTTCCAATTTCTGTGTCA +
Preference number: 3 (lower is better)
Translates to: RGSVLGHCYKGSAVMRDLVLAVL*VPISVS
Trigger: TGACACAGAAATTGGAACCAACAAAACTGCTAACAC...TAGATCTCTCATTACTGCAGATCCTTTATAGCAGTGTCCAAGTACAGATCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR-3UTR CAA 90 bp TCAACTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCAATTTCTGTGGAGGGGTCCCATCTTaGTTTGGAGGAACTATAAAT +
Preference number: 3 (lower is better)
Translates to: STQNSQQGVSSFVGSNFCGGVPS*FGGTIN
Trigger: ATTTATAGTTCCTCCAAACAAAGATGGGACCCCTCC...ACAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR-3UTR CAA 90 bp TCAACTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCAATTTCTGTGCTTTGCTCTTATGTTaGTTTGTGCAGCACTCCAAT +
Preference number: 3 (lower is better)
Translates to: STQNSQQGVSSFVGSNFCALLLC*FVQHSN
Trigger: ATTGGAGTGCTGCACAAACAAACATAAGAGCAAAGC...ACAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR-3UTR CAA 90 bp TCAACTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCAATTTCTGTTTCTGGAGCCTAGGTTaGGCATGCTTTTGTAGTAAA +
Preference number: 3 (lower is better)
Translates to: STQNSQQGVSSFVGSNFCFWSLG*ACFCSK
Trigger: TTTACTACAAAAGCATGCCAAACCTAGGCTCCAGAA...ACAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR GCA 72 bp ACTGCTTGCCAAATATGCTTTGCATTACAACAGACGTaGCCTGTAAACATAAAAGTTTGTCCTGCTCTAATT +
Preference number: 3 (lower is better)
Translates to: TACQICFALQQT*PVNIKVCPALI
Trigger: AATTAGAGCAGGACAAACTTTTATGTTTACAGGGCACGTCTGTTGTAATGCAAAGCATATTTGGCAAGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR GCA 72 bp ATTCCAACCAATTTCTCCTTCACAAAATTTGGACTTTaGCGCAAATATTTATCAGTTAGGAGCAGAGGCTGT +
Preference number: 3 (lower is better)
Translates to: IPTNFSFTKFGL*RKYLSVRSRGC
Trigger: ACAGCCTCTGCTCCTAACTGATAAATATTTGCGGCAAAGTCCAAATTTTGTGAAGGAGAAATTGGTTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR GCA 72 bp TCACCTTACCATAAGTTTGCTAACTTGTTTGGTTTCTaGTCTTCCGTTGTTCATATTGTGGTTGAAGAGACT +
Preference number: 3 (lower is better)
Translates to: SPYHKFANLFGF*SSVVHIVVEET
Trigger: AGTCTCTTCAACCACAATATGAACAACGGAAGAGCAGAAACCAAACAAGTTAGCAAACTTATGGTAAGGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR-3UTR CAA 90 bp CTTTGCTCTCTTACTGGTAGACAAACTTGCAAGACCAGCACAAAAGAAAAAGAAAAAAAGTCTGAGAGTTaGTGTTTGTCTTTAGAGGAC +
Preference number: 3 (lower is better)
Translates to: LCSLTGRQTCKTSTKEKEKKSES*CLSLED
Trigger: GTCCTCTAAAGACAAACACAAACTCTCAGACTTTTT...TTCTTTTTCTTTTGTGCTGGTCTTGCAAGTTTGTCTACCAGTAAGAGAGCAAAG
38% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
3UTR CCA 72 bp GGCGCATTTGGAATACTTTTAGATGCATTTGGATTATaGAGTACTTTGATAACCCACCATGTACAACTGTAT +
Preference number: 3 (lower is better)
Translates to: GAFGILLDAFGL*STLITHHVQLY
Trigger: ATACAGTTGTACATGGTGGGTTATCAAAGTACTCCATAATCCAAATGCATCTAAAAGTATTCCAAATGCGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR-3UTR CAA 90 bp GATTTAGGAGTACACACATTATTACCACTGCTTATATCAACTCAGAACAGTCAAGTGTTAGCAGTTTTGTaGGTTCCAATTTCTGTGTCA +
Preference number: 3 (lower is better)
Translates to: DLGVHTLLPLLISTQNSQVLAVL*VPISVS
Trigger: TGACACAGAAATTGGAACCAACAAAACTGCTAACAC...TTGACTGTTCTGAGTTGATATAAGCAGTGGTAATAATGTGTGTACTCCTAAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000502815.1
ENST00000504896.5
ENST00000506700.5
ENST00000506720.5
ENST00000506746.5
ENST00000507625.5
ENST00000508946.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
ENST00000514591.5
ENST00000514996.5
3UTR-3UTR CAA 90 bp CAGCATAAAGATTTAGGAGTACACACATTATTACCACTGCTTATATCAACTCAGGTGTTAGCAGTTTTGTaGGTTCCAATTTCTGTGTCA +
Preference number: 3 (lower is better)
Translates to: QHKDLGVHTLLPLLISTQVLAVL*VPISVS
Trigger: TGACACAGAAATTGGAACCAACAAAACTGCTAACAC...CTGAGTTGATATAAGCAGTGGTAATAATGTGTGTACTCCTAAATCTTTATGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000502815.1
ENST00000504896.5
ENST00000506700.5
ENST00000506720.5
ENST00000506746.5
ENST00000507625.5
ENST00000508946.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
ENST00000514591.5
ENST00000514996.5
3UTR CCA 72 bp AATGAAAGGCGCATTTGGAATACTTTTAGATGCATTTaGATTATGGAGTACTTTGATAACCCACCATGTACA +
Preference number: 3 (lower is better)
Translates to: NERRIWNTFRCI*IMEYFDNPPCT
Trigger: TGTACATGGTGGGTTATCAAAGTACTCCATAATCCAAATGCATCTAAAAGTATTCCAAATGCGCCTTTCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR TCA 72 bp GATGTAAAGGTTGTACAAGGGAAATATCCAATAGCTTaGAATCTGGTAGGTGTATATGAAAAGAATAATGCC +
Preference number: 3 (lower is better)
Translates to: DVKVVQGKYPIA*NLVGVYEKNNA
Trigger: GGCATTATTCTTTTCATATACACCTACCAGATTTCAAGCTATTGGATATTTCCCTTGTACAACCTTTACATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR GCA 72 bp TCTGGTTTACTTTGTCTGCAAACCTGTATGATTTTGTaGTTAGCTTATTCATCTAGGCAGATTGATTTCTTT +
Preference number: 3 (lower is better)
Translates to: SGLLCLQTCMIL*LAYSSRQIDFF
Trigger: AAAGAAATCAATCTGCCTAGATGAATAAGCTAAGCACAAAATCATACAGGTTTGCAGACAAAGTAAACCAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512091.6
CDS-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCAGGAGGCCTACCAGCTaGTCCATGGCCCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSRRPTS*SMARTE
Trigger: CTCTGTCCGGGCCATGGACCAGCTGGTAGGCCTCCT...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGAGGAGGCCTACCAGCTaGTCCATGGCCCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRRRPTS*SMARTE
Trigger: CTCTGTCCGGGCCATGGACCAGCTGGTAGGCCTCCT...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCGTGGCCGCACGCAGCTaGTCACTCGTAGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSVAARS*SLVVRS
Trigger: AGACCTGACTACGAGTGATCAGCTGCGTGCGGCCAC...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCACGGATTCGGCTCTGTaGGCCTGTGGAGTAGCGTCC +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSTDSAL*ACGVAS
Trigger: GGACGCTACTCCACAGGCTCACAGAGCCGAATCCGT...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCACCACATTTGGCCGGTaGGGGTTCGGTCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSTTFGR*GFGLGA
Trigger: AGCACCCAGACCGAACCCCCACCGGCCAAATGTGGT...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGACCACATTTGGCCGGTaGGGGTTCGGTCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRTTFGR*GFGLGA
Trigger: AGCACCCAGACCGAACCCCCACCGGCCAAATGTGGT...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCGGCATCACCACATTTaGCCGGTGGGGGTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSRHHHI*PVGVRS
Trigger: AGACCGAACCCCCACCGGCCAAATGTGGTGATGCCG...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCGGCATCACCACATTTaGCCGGTGGGGGTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRRHHHI*PVGVRS
Trigger: AGACCGAACCCCCACCGGCCAAATGTGGTGATGCCG...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGATGAGCCGGTCCTTTTaGACTTCCCTCGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRMSRSF*TSLGRG
Trigger: ACCCCTCCCGAGGGAAGTTCAAAAGGACCGGCTCAT...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTTGGAAGAGCGCCTCCTaGGCTGCGCTCAGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESWKSAS*AALSVS
Trigger: CGACACGCTGAGCGCAGCCCAGGAGGCGCTCTTCCA...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCGCGGACCACAGCCATTaGAATTGGGGCACGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGADHSH*NWGTAE
Trigger: TTCAGCCGTGCCCCAATTCCAATGGCTGTGGTCCGC...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCGCGGACCACAGCCATTaGAATTGGGGCACGGCTGAA +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSADHSH*NWGTAE
Trigger: TTCAGCCGTGCCCCAATTCCAATGGCTGTGGTCCGC...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCGGCTCTGTGAGCCTGTaGAGTAGCGTCCAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGGSVSL*SSVQEF
Trigger: GAACTCCTGGACGCTACTCCACAGGCTCACAGAGCC...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTGGTGGGGGTTCGGTCTaGGTGCTGGTGGTAACACTC +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGGGGSV*VLVVTL
Trigger: GAGTGTTACCACCAGCACCCAGACCGAACCCCCACC...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCTGACACAGCCACAATaGGTGCAGGCATCCCATAGC +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSLTQPQ*VQASHS
Trigger: GCTATGGGATGCCTGCACTCATTGTGGCTGTGTCAG...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCTGACACAGCCACAATaGGTGCAGGCATCCCATAGC +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRLTQPQ*VQASHS
Trigger: GCTATGGGATGCCTGCACTCATTGTGGCTGTGTCAG...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCACGATGAGCAGCGGTaGGCTCTGCAGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESHDEQR*ALQLAA
Trigger: AGCAGCCAGCTGCAGAGCGCACCGCTGCTCATCGTG...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR GCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCACAGCCACAATGAGTaGAGGCATCCCATAGCCGAC +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSHSHNE*RHPIAD
Trigger: GTCGGCTATGGGATGCCTGCACTCATTGTGGCTGTG...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTAAGCAGATGTCTGGGTaGAAGAGCGCCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGKQMSG*KSASWA
Trigger: AGCCCAGGAGGCGCTCTTCCACCCAGACATCTGCTT...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR CCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTGCAATCTGTGCTCCTTaGGCACCTGGACCGCGAACT +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGAICAP*APGPRT
Trigger: AGTTCGCGGTCCAGGTGCCCAAGGAGCACAGATTGC...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCTGGGCTCAAAGTTGTaGTCCGAAGGGTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRLGSKL*SEGWYW
Trigger: CCAGTACCACCCTTCGGACCACAACTTTGAGCCCAG...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCGGTGGTACTCCTTCCTaGGCTCAAAGTTGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSGGTPS*AQSCGP
Trigger: CGGACCACAACTTTGAGCCCAGGAAGGAGTACCACC...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGGGTGGTACTCCTTCCTaGGCTCAAAGTTGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRGGTPS*AQSCGP
Trigger: CGGACCACAACTTTGAGCCCAGGAAGGAGTACCACC...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCGGTGGTACTCCTTCCTaGGCTCAAAGTTGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGGGTPS*AQSCGP
Trigger: CGGACCACAACTTTGAGCCCAGGAAGGAGTACCACC...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTCTGACACTGACGGGGTaGTACTCCTTCCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGLTLTG*YSFLGS
Trigger: TGAGCCCAGGAAGGAGTACCACCCCGTCAGTGTCAG...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGTGCGGCAGTCATAGCTaGGGCTGCTTCTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRCGSHS*GCFSFS
Trigger: AGAGAAGGAGAAGCAGCCCCAGCTATGACTGCCGCA...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512091.6
CDS-3UTR TCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGCAGCTGGCTGCTaGAGCAGATGTCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLSAAGC*SRCLGG
Trigger: TCCACCCAGACATCTGCTTCAGCAGCCAGCTGCAGA...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR TCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTGTGGCCGCACGCAGCTaGTCACTCGTAGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESVAARS*SLVVRS
Trigger: AGACCTGACTACGAGTGATCAGCTGCGTGCGGCCAC...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCTTTCCTCCACAGTATaGAGCAACATGGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRLSSTV*SNMVAA
Trigger: TGCGGCCACCATGTTGCTTCATACTGTGGAGGAAAG...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCGGACAAAGGCCACTCTaGTCTCTCCATTTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGGQRPL*SLHFGH
Trigger: ATGGCCGAAATGGAGAGATCAGAGTGGCCTTTGTCC...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCCAGGAACATCCAGGTaGAGGCAGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSPGTSR*RQPRRR
Trigger: TCTTCTTCTTGGCTGCCTTCACCTGGATGTTCCTGG...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTACGGATTCGGCTCTGTaGGCCTGTGGAGTAGCGTCC +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESTDSAL*ACGVAS
Trigger: GGACGCTACTCCACAGGCTCACAGAGCCGAATCCGT...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCACGGATTCGGCTCTGTaGGCCTGTGGAGTAGCGTCC +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVTDSAL*ACGVAS
Trigger: GGACGCTACTCCACAGGCTCACAGAGCCGAATCCGT...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCCAGCCAGTGTCGGCATaGTGGTATAGAGAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGQPVSA*WYRESL
Trigger: GAGACTCTCTCTATACCAGCATGCCGACACTGGCTG...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTTGGAAGAGCGCCTCCTaGGCTGCGCTCAGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVWKSAS*AALSVS
Trigger: CGACACGCTGAGCGCAGCCCAGGAGGCGCTCTTCCA...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCCACAGCCATTGGAATTaGGGCACGGCTGAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGHSHWN*GTAESL
Trigger: CAAGCTTTCAGCCGTGCCCCAATTCCAATGGCTGTG...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCTCCTGGACACGGGTCTaGAAAAACATCAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGSWTRV*KNIRTC
Trigger: GCAGGTCCTGATGTTTTTCCAGACCCGTGTCCAGGA...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCTCCTGGACACGGGTCTaGAAAAACATCAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSSWTRV*KNIRTC
Trigger: GCAGGTCCTGATGTTTTTCCAGACCCGTGTCCAGGA...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTGGTGGTACTCCTTCCTaGGCTCAAAGTTGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGGGTPS*AQSCGP
Trigger: CGGACCACAACTTTGAGCCCAGGAAGGAGTACCACC...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCTCGAGAGCTGGGATTTaGGACGATGCTGATGGAAGG +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGSRAGI*DDADGR
Trigger: CCTTCCATCAGCATCGTCCCAAATCCCAGCTCTCGA...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCTCGAGAGCTGGGATTTaGGACGATGCTGATGGAAGG +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSSRAGI*DDADGR
Trigger: CCTTCCATCAGCATCGTCCCAAATCCCAGCTCTCGA...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCAGTTCCTGCAGGGCATaGCTGCTTTGCTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSSSCRA*LLCYLS
Trigger: GGACAGATAGCAAAGCAGCCATGCCCTGCAGGAACT...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCTATGAAGCAACATGGTaGCCGCACGCAGCTGATCAC +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSYEATW*PHAADH
Trigger: GTGATCAGCTGCGTGCGGCCACCATGTTGCTTCATA...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTGGGGGATCCGCCTTCTaGTATAATGGTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGGGSAF*YNGVAG
Trigger: ACCAGCCACACCATTATACCAGAAGGCGGATCCCCC...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTACCACATTTGGCCGGTaGGGGTTCGGTCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESTTFGR*GFGLGA
Trigger: AGCACCCAGACCGAACCCCCACCGGCCAAATGTGGT...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCGGCATCACCACATTTaGCCGGTGGGGGTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESRHHHI*PVGVRS
Trigger: AGACCGAACCCCCACCGGCCAAATGTGGTGATGCCG...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCGAGAAGAACAGTTGCTaGGATCTGGACCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSEKNSC*DLDLGD
Trigger: ATCCCCAAGGTCCAGATCTCAGCAACTGTTCTTCTC...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTCACGATGAGCAGCGGTaGGCTCTGCAGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTHDEQR*ALQLAA
Trigger: AGCAGCCAGCTGCAGAGCGCACCGCTGCTCATCGTG...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR GCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGAAAAACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRKNIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTTTTT...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCAAAAACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSKNIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTTTTT...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATCTTGTCAGATGCCTaGAGAGGGTCTTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGILSDA*RGSLHH
Trigger: GTGGTGCAAAGACCCTCTGCAGGCATCTGACAAGAT...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCACACTACAAATCCTGTaGCATCCACCCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSTLQIL*HPPCEG
Trigger: TCCCTCACAGGGTGGATGGCACAGGATTTGTAGTGT...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCACACTACAAATCCTGTaGCATCCACCCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGTLQIL*HPPCEG
Trigger: TCCCTCACAGGGTGGATGGCACAGGATTTGTAGTGT...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTGGTCTATGTCAGATTTaGCTCCCCATCGGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGGLCQI*LPIGKG
Trigger: CCCCTTACCGATGGGGAGGCAAATCTGACATAGACC...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCCTGGACATAGGCTCTaGAAGAGCGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRPGHRL*KSALFS
Trigger: AGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGG...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCTGGACCGCATCACTGTaGTTAACTTCCACATGTGCC +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGWTASL*LTSTCA
Trigger: GGCACATGTGGAAGTTAAGCACAGTGATGCGGTCCA...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCTGGAAGAGCGCCTCCTaGGCTGCGCTCAGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLWKSAS*AALSVS
Trigger: CGACACGCTGAGCGCAGCCCAGGAGGCGCTCTTCCA...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR CCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTAAGCAGATGTCTGGGTaGAAGAGCGCCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESKQMSG*KSASWA
Trigger: AGCCCAGGAGGCGCTCTTCCACCCAGACATCTGCTT...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR CCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTCACAGCCATTGGAATTaGGGCACGGCTGAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGHSHWN*GTAESL
Trigger: CAAGCTTTCAGCCGTGCCCCAATTCCAATGGCTGTG...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR CCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTAGTTCCTGCAGGGCATaGCTGCTTTGCTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGSSCRA*LLCYLS
Trigger: GGACAGATAGCAAAGCAGCCATGCCCTGCAGGAACT...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTCAGTATGAAGCAACATaGTGGCCGCACGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGQYEAT*WPHAAD
Trigger: ATCAGCTGCGTGCGGCCACCATGTTGCTTCATACTG...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCGTATTTGCAGACAGCTaGATAGTGCTTCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSVFADS*IVLPWP
Trigger: GGGCCATGGAAGCACTATCCAGCTGTCTGCAAATAC...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGGCACAGGCAATTGGTTaGTCAGTTCGGTTGATCCCA +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRAQAIG*SVRLIP
Trigger: TGGGATCAACCGAACTGACCAACCAATTGCCTGTGC...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCTCTGGTATAATGGTGTaGCTGGTGGTTCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGSGIMV*LVVLGG
Trigger: TCCACCGAGAACCACCAGCCACACCATTATACCAGA...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCAAAAAGCTCTCACTGTaGTCTTGGGGGATCCGCCTT +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSKKLSL*SWGIRL
Trigger: AAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTT...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCTCTCTATGGGGTGACTaGAGATCTTCTGTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGSLWGD*RSSVCS
Trigger: CGAGCACACAGAAGATCTCCAGTCACCCCATAGAGA...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCTCTCTATGGGGTGACTaGAGATCTTCTGTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSSLWGD*RSSVCS
Trigger: CGAGCACACAGAAGATCTCCAGTCACCCCATAGAGA...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTGTGGCCGCACGCAGCTaGTCACTCGTAGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVVAARS*SLVVRS
Trigger: AGACCTGACTACGAGTGATCAGCTGCGTGCGGCCAC...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCGGACAAAGGCCACTCTaGTCTCTCCATTTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLGQRPL*SLHFGH
Trigger: ATGGCCGAAATGGAGAGATCAGAGTGGCCTTTGTCC...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCCTGACACAGCCACAATaGGTGCAGGCATCCCATAGC +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVLTQPQ*VQASHS
Trigger: GCTATGGGATGCCTGCACTCATTGTGGCTGTGTCAG...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCGTAGTCTACTGCAGCTaGCACAGCCACAATGAGTGC +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLVVYCS*HSHNEC
Trigger: GCACTCATTGTGGCTGTGTCAGCTGCAGTAGACTAC...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGACGGATTCGGCTCTGTaGGCCTGTGGAGTAGCGTCC +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKETDSAL*ACGVAS
Trigger: GGACGCTACTCCACAGGCTCACAGAGCCGAATCCGT...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGTGTAGGGCTCTCTGTTaGGTGACGCTGAACTGTTTA +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRCRALC*VTLNCL
Trigger: TAAACAGTTCAGCGTCACTCAACAGAGAGCCCTACA...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506700.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
CDS-3UTR GCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTTGGACCGCATCACTGTaGTTAACTTCCACATGTGCC +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGWTASL*LTSTCA
Trigger: GGCACATGTGGAAGTTAAGCACAGTGATGCGGTCCA...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCCACAGCCACAATGAGTaGAGGCATCCCATAGCCGAC +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVHSHNE*RHPIAD
Trigger: GTCGGCTATGGGATGCCTGCACTCATTGTGGCTGTG...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGTCTGTAGGGCTCTTGTaGGTTGTACATGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRSVGLL*VVHADR
Trigger: TCTGTCAGCATGTACAACGCACAAGAGCCCTACAGA...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504896.5
ENST00000507164.5
ENST00000508693.5
ENST00000514157.5
CDS-3UTR CCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCGCTGCGATGGCCACATaGCTGTCTACTCAGGTATGG +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVAAMAT*LSTQVW
Trigger: CCATACCTGAGTAGACAGCCATGTGGCCATCGCAGC...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCCTGGGCTCAAAGTTGTaGTCCGAAGGGTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVLGSKL*SEGWYW
Trigger: CCAGTACCACCCTTCGGACCACAACTTTGAGCCCAG...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCTGGGCTCAAAGTTGTaGTCCGAAGGGTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESLGSKL*SEGWYW
Trigger: CCAGTACCACCCTTCGGACCACAACTTTGAGCCCAG...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCCTCGACAGCTGGAGATaGGGTACTAGTACTCCGGTT +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLLDSWR*GTSTPV
Trigger: AACCGGAGTACTAGTACCCCATCTCCAGCTGTCGAG...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCAAGTACCTCGACAGCTaGAGATGGGGTACTAGTACT +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSKYLDS*RWGTST
Trigger: AGTACTAGTACCCCATCTCCAGCTGTCGAGGTACTT...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCGAGAGCTGGGATTTaGGACGATGCTGATGGAAGG +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLSRAGI*DDADGR
Trigger: CCTTCCATCAGCATCGTCCCAAATCCCAGCTCTCGA...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCAGGAGGCCTACCAGCTaGTCCATGGCCCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRRRPTS*SMARTE
Trigger: CTCTGTCCGGGCCATGGACCAGCTGGTAGGCCTCCT...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTATGAAGCAACATGGTaGCCGCACGCAGCTGATCAC +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLYEATW*PHAADH
Trigger: GTGATCAGCTGCGTGCGGCCACCATGTTGCTTCATA...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGATGCAGAGGTTCTTGTaGATGGTGTTACGGTCACTC +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRMQRFL*MVLRSL
Trigger: GAGTGACCGTAACACCATCCACAAGAACCTCTGCAT...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCATGCAGAGGTTCTTGTaGATGGTGTTACGGTCACTC +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSMQRFL*MVLRSL
Trigger: GAGTGACCGTAACACCATCCACAAGAACCTCTGCAT...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCTCAGGTATTCGCCGCTaGCAATGCTGTAACTATTGC +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGSGIRR*QCCNYC
Trigger: GCAATAGTTACAGCATTGCCAGCGGCGAATACCTGA...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCTCCTGTTCTGTTCACTaGAGCGCTCATGGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGSCSVH*SAHGCS
Trigger: TGAACAACCATGAGCGCTCCAGTGAACAGAACAGGA...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCCAGTGTCGGCATGCTaGTATAGAGAGAGTCTCTAT +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSPVSAC*YRESLY
Trigger: ATAGAGACTCTCTCTATACCAGCATGCCGACACTGG...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTGGTGGGGGTTCGGTCTaGGTGCTGGTGGTAACACTC +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVGGGSV*VLVVTL
Trigger: GAGTGTTACCACCAGCACCCAGACCGAACCCCCACC...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGTCTGCAGCTGGCTGCTaGAGCAGATGTCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKESAAGC*SRCLGG
Trigger: TCCACCCAGACATCTGCTTCAGCAGCCAGCTGCAGA...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR TCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCTGGTGCGCTCTTTGTTaGAGAACAAAGCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGWCALC*RTKLHH
Trigger: ATGATGGAGCTTTGTTCTTCAACAAAGAGCGCACCA...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCGAGAAGAACAGTTGCTaGGATCTGGACCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLEKNSC*DLDLGD
Trigger: ATCCCCAAGGTCCAGATCTCAGCAACTGTTCTTCTC...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTTCCCCAGCATTCAAGTaGTTTCTTGTCTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGSPAFK*FLVCSA
Trigger: GGCTGAACAGACAAGAAATCACTTGAATGCTGGGGA...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCTTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTAAATTCCAACCCACGTaGTCACATCCAGAAGGAGGT +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGKFQPT*SHPEGG
Trigger: ACCTCCTTCTGGATGTGATCACGTGGGTTGGAATTT...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCGTTGGTCAGTTCGGTTaGTCCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLVGQFG*SQSGRA
Trigger: TGCTCTTCCTGATTGGGATCAACCGAACTGACCAAC...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTGTAGTCTACTGCAGCTaGCACAGCCACAATGAGTGC +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESVVYCS*HSHNEC
Trigger: GCACTCATTGTGGCTGTGTCAGCTGCAGTAGACTAC...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCACCAGATGTTTTCCCTaGACCAATGGAACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGTRCFP*TNGTLC
Trigger: ACAGAGAGTTCCATTGGTTCAGGGAAAACATCTGGT...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCACGGATTCGGCTCTGTaGGCCTGTGGAGTAGCGTCC +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRTDSAL*ACGVAS
Trigger: GGACGCTACTCCACAGGCTCACAGAGCCGAATCCGT...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGAGACTAGTGACCAAATaGGCCGGTCCTTTTGAACTT +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRRLVTK*AGPFEL
Trigger: AAGTTCAAAAGGACCGGCTCATTTGGTCACTAGTCT...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGGTAAACGCCGGTCCCTaGGATCGTCCCATCAGTTGC +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKEVNAGP*DRPISC
Trigger: GCAACTGATGGGACGATCTCAGGGACCGGCGTTTAC...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512091.6
CDS-3UTR TCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCCCACAATCCAGCCATTaGGCCCGGGGCAAAAGACCG +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLPQSSH*ARGKRP
Trigger: CGGTCTTTTGCCCCGGGCTCAATGGCTGGATTGTGG...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512091.6
CDS-3UTR GCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCAAGGAAGACTCTGACTaGTTTCGAACCGTGTCATTC +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSKEDSD*FRTVSF
Trigger: GAATGACACGGTTCGAAAGCAGTCAGAGTCTTCCTT...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTTCTGTAGGGCTCTTGTaGGTTGTACATGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGSVGLL*VVHADR
Trigger: TCTGTCAGCATGTACAACGCACAAGAGCCCTACAGA...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504896.5
ENST00000507164.5
ENST00000508693.5
ENST00000514157.5
CDS-3UTR CCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCTCAGCGTGTCGCAATaGAGCAGCAAGGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKELSVSQ*SSKGRM
Trigger: CATCCTGCCCTTGCTGCTCCATTGCGACACGCTGAG...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR CCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTGCGGACCACAGCCATTaGAATTGGGGCACGGCTGAA +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTADHSH*NWGTAE
Trigger: TTCAGCCGTGCCCCAATTCCAATGGCTGTGGTCCGC...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCACCACGCCCCAGATTaGTGGTCGGACTCAAACAAA +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESHHAPD*WSDSNK
Trigger: TTTGTTTGAGTCCGACCACCAATCTGGGGCGTGGTG...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCCTCGACAGCTGGAGATaGGGTACTAGTACTCCGGTT +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVLDSWR*GTSTPV
Trigger: AACCGGAGTACTAGTACCCCATCTCCAGCTGTCGAG...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCCTGATGGAAGGTGTGTaGTCATGTCATCAAGTACCT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGLMEGV*SCHQVP
Trigger: AGGTACTTGATGACATGACCACACACCTTCCATCAG...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGAGGAGGCCTACCAGCTaGTCCATGGCCCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLRRPTS*SMARTE
Trigger: CTCTGTCCGGGCCATGGACCAGCTGGTAGGCCTCCT...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCCAGAAGGAGGTCATaGACCGCATCACTGTGCTTA +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLSRRRS*TASLCL
Trigger: TAAGCACAGTGATGCGGTCCATGACCTCCTTCTGGA...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCGCACAGGCAATTGGTTaGTCAGTTCGGTTGATCCCA +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLAQAIG*SVRLIP
Trigger: TGGGATCAACCGAACTGACCAACCAATTGCCTGTGC...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGAACAGCACAGGCAATTaGTTGGTCAGTTCGGTTGAT +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRNSTGN*LVSSVD
Trigger: ATCAACCGAACTGACCAACCAATTGCCTGTGCTGTT...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCAACAGCACAGGCAATTaGTTGGTCAGTTCGGTTGAT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGNSTGN*LVSSVD
Trigger: ATCAACCGAACTGACCAACCAATTGCCTGTGCTGTT...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCTTCTGTGTGCTCGTTaGTTAGCAAAGGGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSLLCAR*LAKGKS
Trigger: GCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAG...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCGGTGGGGGTTCGGTCTaGGTGCTGGTGGTAACACTC +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLGGGSV*VLVVTL
Trigger: GAGTGTTACCACCAGCACCCAGACCGAACCCCCACC...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAACGGCATCACCACATTTaGCCGGTGGGGGTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQRHHHI*PVGVRS
Trigger: AGACCGAACCCCCACCGGCCAAATGTGGTGATGCCG...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTGATGGACGTGGTTTCTaGAGCCTAGGTTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESDGRGF*SLGLAC
Trigger: GCATGCCAAACCTAGGCTCCAGAAACCACGTCCATC...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCGAGCTAAGAGCATCATaGAAATTAGTAGCTGCGATG +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGELRAS*KLVAAM
Trigger: CATCGCAGCTACTAATTTTCATGATGCTCTTAGCTC...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCCGGATATTCTCCATCTaGGCAGGGTCAGAGTCACAA +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVRIFSI*AGSESQ
Trigger: TTGTGACTCTGACCCTGCTCAGATGGAGAATATCCG...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTTGGCGGAGAAATGTATaGAACTTGTCCATGATGTGC +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGWRRNV*NLSMMC
Trigger: GCACATCATGGACAAGTTTCATACATTTCTCCGCCA...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCTTTGCTATCTGTCCTTaGCGAGTCTTAAACCACATG +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGFAICP*RVLNHM
Trigger: CATGTGGTTTAAGACTCGTCAAGGACAGATAGCAAA...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTGAGAAGAACAGTTGCTaGGATCTGGACCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESEKNSC*DLDLGD
Trigger: ATCCCCAAGGTCCAGATCTCAGCAACTGTTCTTCTC...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCCCCAGCATTCAAGTaGTTTCTTGTCTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLSPAFK*FLVCSA
Trigger: GGCTGAACAGACAAGAAATCACTTGAATGCTGGGGA...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTCCCGGACAGAGTAGGTaGTGTCCCCAGCATTCAAGT +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTPGQSR*CPQHSS
Trigger: ACTTGAATGCTGGGGACATCACCTACTCTGTCCGGG...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTTTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCGTTGGTCAGTTCGGTTaGTCCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVVGQFG*SQSGRA
Trigger: TGCTCTTCCTGATTGGGATCAACCGAACTGACCAAC...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTACCAGATGTTTTCCCTaGACCAATGGAACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGTRCFP*TNGTLC
Trigger: ACAGAGAGTTCCATTGGTTCAGGGAAAACATCTGGT...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTAATAAAGGAAGACTCTaGCTGCTTTCGAACCGTGTC +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGNKGRL*LLSNRV
Trigger: GACACGGTTCGAAAGCAGTCAGAGTCTTCCTTTATT...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCCATGGCTCCTCTGTTaGGTGACGCTGAACTGTTTA +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESPWLLC*VTLNCL
Trigger: TAAACAGTTCAGCGTCACTCAACAGAGGAGCCATGG...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504896.5
ENST00000507164.5
ENST00000508693.5
ENST00000514157.5
CDS-3UTR TCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCCCATGGCTCCTCTGTTaGGTGACGCTGAACTGTTTA +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVPWLLC*VTLNCL
Trigger: TAAACAGTTCAGCGTCACTCAACAGAGGAGCCATGG...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504896.5
ENST00000507164.5
ENST00000508693.5
ENST00000514157.5
CDS-3UTR TCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTAGAGTCTCTATGGGGTaGCTGGAGATCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESRVSMG*LEIFCV
Trigger: CACACAGAAGATCTCCAGTCACCCCATAGAGACTCT...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCAGAGTCTCTATGGGGTaGCTGGAGATCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVRVSMG*LEIFCV
Trigger: CACACAGAAGATCTCCAGTCACCCCATAGAGACTCT...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCATGAGCCGGTCCTTTTaGACTTCCCTCGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLMSRSF*TSLGRG
Trigger: ACCCCTCCCGAGGGAAGTTCAAAAGGACCGGCTCAT...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCAAAAACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVKNIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTTTTT...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATAAATCTTGTCAGATaGCTGCAGAGGGTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGINLVR*LQRVFA
Trigger: TGCAAAGACCCTCTGCAGGCATCTGACAAGATTTAT...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCCTGGACATAGGCTCTaGAAGAGCGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESPGHRL*KSALFS
Trigger: AGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGG...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCGGATTGTTAGTACCATaGGGACGAAGCAGAGCATTG +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLGLLVP*GRSRAL
Trigger: CAATGCTCTGCTTCGTCCGCATGGTACTAACAATCC...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000504896.5
ENST00000507164.5
ENST00000508693.5
ENST00000514157.5
CDS-3UTR GCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTGGAGATCTTCTGTGTaGTCGTTGGTTAGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLWRSSV*SLVSKG
Trigger: CCCTTTGCTAACCAACGAGCACACAGAAGATCTCCA...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAGCAATCTGTGCTCCTTaGGCACCTGGACCGCGAACT +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQAICAP*APGPRT
Trigger: AGTTCGCGGTCCAGGTGCCCAAGGAGCACAGATTGC...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR CCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCGCGGACCACAGCCATTaGAATTGGGGCACGGCTGAA +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRADHSH*NWGTAE
Trigger: TTCAGCCGTGCCCCAATTCCAATGGCTGTGGTCCGC...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCGATGACGTCTGTTCCTaGACAGCGAAGCTCTATAGG +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVDDVCS*TAKLYR
Trigger: CCTATAGAGCTTCGCTGTCCAGGAACAGACGTCATC...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGGTATTTATAGGTTCCTaGACACGGGTCTGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRVFIGS*TRVWKN
Trigger: GTTTTTCCAGACCCGTGTCCAGGAACCTATAAATAC...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCACGCCCCAGATTGGTaGTCGGACTCAAACAAATGT +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESHAPDW*SDSNKC
Trigger: ACATTTGTTTGAGTCCGACCACCAATCTGGGGCGTG...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCTGGGCTCAAAGTTGTaGTCCGAAGGGTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKELGSKL*SEGWYW
Trigger: CCAGTACCACCCTTCGGACCACAACTTTGAGCCCAG...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCCTGACACTGACGGGGTaGTACTCCTTCCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLLTLTG*YSFLGS
Trigger: TGAGCCCAGGAAGGAGTACCACCCCGTCAGTGTCAG...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCTACTGGCATTCTCCGTaGATAAATAAGGACCCAAGT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGYWHSP*INKDPS
Trigger: ACTTGGGTCCTTATTTATCCACGGAGAATGCCAGTA...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCTGTCATTGTACGCTTaGAGTAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSLSLYA*SSSKMN
Trigger: GTTCATTTTGGAGCTACTCCAAGCGTACAATGACAG...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCTGTCATTGTACGCTTaGAGTAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRLSLYA*SSSKMN
Trigger: GTTCATTTTGGAGCTACTCCAAGCGTACAATGACAG...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTGCACAGGCAATTGGTTaGTCAGTTCGGTTGATCCCA +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESAQAIG*SVRLIP
Trigger: TGGGATCAACCGAACTGACCAACCAATTGCCTGTGC...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAGGCTCTGTGAGCCTGTaGAGTAGCGTCCAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQGSVSL*SSVQEF
Trigger: GAACTCCTGGACGCTACTCCACAGGCTCACAGAGCC...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGGGGGGATCCGCCTTCTaGTATAATGGTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKEGGSAF*YNGVAG
Trigger: ACCAGCCACACCATTATACCAGAAGGCGGATCCCCC...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTCTTCTGTGTGCTCGTTaGTTAGCAAAGGGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGLLCAR*LAKGKS
Trigger: GCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAG...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCCCTCATATACAGATTTaGCCACATACAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGPHIQI*PHTEFH
Trigger: GTGGAATTCTGTATGTGGTCAAATCTGTATATGAGG...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTGGCGGAGAAATGTATaGAACTTGTCCATGATGTGC +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLWRRNV*NLSMMC
Trigger: GCACATCATGGACAAGTTTCATACATTTCTCCGCCA...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAACCCGGACAGAGTAGGTaGTGTCCCCAGCATTCAAGT +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQPGQSR*CPQHSS
Trigger: ACTTGAATGCTGGGGACATCACCTACTCTGTCCGGG...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCCCCGGACAGAGTAGGTaGTGTCCCCAGCATTCAAGT +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLPGQSR*CPQHSS
Trigger: ACTTGAATGCTGGGGACATCACCTACTCTGTCCGGG...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCTGGCAATGCTGTAACTATTGCCATGGTGGCCGCACGCAGCTaGTCACTCGTAGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAAGNAVTIAMVAARS*SLVVRS
Trigger: AGACCTGACTACGAGTGATCAGCTGCGTGCGGCCAC...CATGGCAATAGTTACAGCATTGCCAGCGGCGAATACCTGAGCAACTGTGTGCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCTTTCCTCCACAGTATaGAGCAACATGGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKELSSTV*SNMVAA
Trigger: TGCGGCCACCATGTTGCTTCATACTGTGGAGGAAAG...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTCTTTCCTCCACAGTATaGAGCAACATGGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVLSSTV*SNMVAA
Trigger: TGCGGCCACCATGTTGCTTCATACTGTGGAGGAAAG...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGTGTCTGTATTCTCCCTaGCAATGTCAGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRCLYSP*QCQSSK
Trigger: TTTTGAAGACTGACATTGTCAGGGAGAATACAGACA...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCTGTCTGTATTCTCCCTaGCAATGTCAGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGCLYSP*QCQSSK
Trigger: TTTTGAAGACTGACATTGTCAGGGAGAATACAGACA...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCGGAAAAAGCAAAATGTaGAGATGCAAATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGGKSKM*RCKSGD
Trigger: GTCTCCTGATTTGCATCTTCACATTTTGCTTTTTCC...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAACTGACACAGCCACAATaGGTGCAGGCATCCCATAGC +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQLTQPQ*VQASHS
Trigger: GCTATGGGATGCCTGCACTCATTGTGGCTGTGTCAG...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGGTAGTCTACTGCAGCTaGCACAGCCACAATGAGTGC +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKEVVYCS*HSHNEC
Trigger: GCACTCATTGTGGCTGTGTCAGCTGCAGTAGACTAC...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTAGTTGCTCAACAACCTaGAGGCGGGTGCAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTSCSTT*RRVQFP
Trigger: TGGAAACTGCACCCGCCTTCAGGTTGTTGAGCAACT...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512091.6
CDS-3UTR GCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGTTTTGTCATCAGTCCTaGCATAGTTGGCACTTTCTA +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRFCHQS*HSWHFL
Trigger: TAGAAAGTGCCAACTATGGCAGGACTGATGACAAAA...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAAATCTTGTCAGATaGCTGCAGAGGGTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGINLVR*LQRVFA
Trigger: TGCAAAGACCCTCTGCAGGCATCTGACAAGATTTAT...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTGGTCTATGTCAGATTTaGCTCCCCATCGGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVGLCQI*LPIGKG
Trigger: CCCCTTACCGATGGGGAGGCAAATCTGACATAGACC...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCCCACCAAACTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGPPNYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGTTTGGTGG...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTCTAAGTTTCCTTCTGTaGTCAGTCTTGCAACTTCCA +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGLSFLL*SVLQLP
Trigger: TGGAAGTTGCAAGACTGAGCACAGAAGGAAACTTAG...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCCATTTCGGCCATTTTaGTTTAAGGTATTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRPFRPF*FKVFAD
Trigger: GTCTGCAAATACCTTAAAGCAAAATGGCCGAAATGG...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCGAACTCTTTGTTTATTaGTGCCGTAATAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGELFVY*CRNNRG
Trigger: TCCCCTGTTATTACGGCAGCAATAAACAAAGAGTTC...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCGAACTCTTTGTTTATTaGTGCCGTAATAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSELFVY*CRNNRG
Trigger: TCCCCTGTTATTACGGCAGCAATAAACAAAGAGTTC...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCCACAGCCACAATGAGTaGAGGCATCCCATAGCCGAC +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLHSHNE*RHPIAD
Trigger: GTCGGCTATGGGATGCCTGCACTCATTGTGGCTGTG...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCAACTCTCTGTACTTTTaGCACTACAGCAATGTGTTC +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSNSLYF*HYSNVF
Trigger: GAACACATTGCTGTAGTGGCAAAAGTACAGAGAGTT...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGAACTCTCTGTACTTTTaGCACTACAGCAATGTGTTC +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRNSLYF*HYSNVF
Trigger: GAACACATTGCTGTAGTGGCAAAAGTACAGAGAGTT...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCAAGGAAGACTCTGACTaGTTTCGAACCGTGTCATTC +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLKEDSD*FRTVSF
Trigger: GAATGACACGGTTCGAAAGCAGTCAGAGTCTTCCTT...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTGGATTGTTAGTACCATaGGGACGAAGCAGAGCATTG +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESGLLVP*GRSRAL
Trigger: CAATGCTCTGCTTCGTCCGCATGGTACTAACAATCC...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504896.5
ENST00000507164.5
ENST00000508693.5
ENST00000514157.5
CDS-3UTR GCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTCAGCCAGTGTCGGCATaGTGGTATAGAGAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVQPVSA*WYRESL
Trigger: GAGACTCTCTCTATACCAGCATGCCGACACTGGCTG...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTCAGCCAGTGTCGGCATaGTGGTATAGAGAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTQPVSA*WYRESL
Trigger: GAGACTCTCTCTATACCAGCATGCCGACACTGGCTG...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCACAGCCATTGGAATTaGGGCACGGCTGAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKEHSHWN*GTAESL
Trigger: CAAGCTTTCAGCCGTGCCCCAATTCCAATGGCTGTG...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR CCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTTCCTGGACACGGGTCTaGAAAAACATCAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVSWTRV*KNIRTC
Trigger: GCAGGTCCTGATGTTTTTCCAGACCCGTGTCCAGGA...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTCTCGACAGCTGGAGATaGGGTACTAGTACTCCGGTT +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVLDSWR*GTSTPV
Trigger: AACCGGAGTACTAGTACCCCATCTCCAGCTGTCGAG...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTAGTTCCTGCAGGGCATaGCTGCTTTGCTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTSSCRA*LLCYLS
Trigger: GGACAGATAGCAAAGCAGCCATGCCCTGCAGGAACT...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTCTGTCATTGTACGCTTaGAGTAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGLSLYA*SSSKMN
Trigger: GTTCATTTTGGAGCTACTCCAAGCGTACAATGACAG...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCATGCAGAGGTTCTTGTaGATGGTGTTACGGTCACTC +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVMQRFL*MVLRSL
Trigger: GAGTGACCGTAACACCATCCACAAGAACCTCTGCAT...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGTTTTCCCTGAACCAATaGAACTCTCTGTACTTTTGC +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRFSLNQ*NSLYFC
Trigger: GCAAAAGTACAGAGAGTTCCATTGGTTCAGGGAAAA...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGGGCTCTGTGAGCCTGTaGAGTAGCGTCCAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLGSVSL*SSVQEF
Trigger: GAACTCCTGGACGCTACTCCACAGGCTCACAGAGCC...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTTCAGGTATTCGCCGCTaGCAATGCTGTAACTATTGC +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESSGIRR*QCCNYC
Trigger: GCAATAGTTACAGCATTGCCAGCGGCGAATACCTGA...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGGGTGGAGTATACTCTTaGGGGCAGCAAAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKEGGVYS*GQQRSI
Trigger: GATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACC...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAGCTGGTGGTTCTCGGTaGAGTATACTCTTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQAGGSR*SILLGA
Trigger: TGCCCCCAAGAGTATACTCCACCGAGAACCACCAGC...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCGGTGGGGGTTCGGTCTaGGTGCTGGTGGTAACACTC +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIIGGGSV*VLVVTL
Trigger: GAGTGTTACCACCAGCACCCAGACCGAACCCCCACC...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCGAAGTCATCCTTGGATaGATACTCAGTCAGGGTATC +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVEVILG*ILSQGI
Trigger: GATACCCTGACTGAGTATTCATCCAAGGATGACTTC...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCTGGTGCGCTCTTTGTTaGAGAACAAAGCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVWCALC*RTKLHH
Trigger: ATGATGGAGCTTTGTTCTTCAACAAAGAGCGCACCA...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTTGGTGCGCTCTTTGTTaGAGAACAAAGCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESWCALC*RTKLHH
Trigger: ATGATGGAGCTTTGTTCTTCAACAAAGAGCGCACCA...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGCCCGGACAGAGTAGGTaGTGTCCCCAGCATTCAAGT +
Preference number: 4 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLPGQSR*CPQHSS
Trigger: ACTTGAATGCTGGGGACATCACCTACTCTGTCCGGG...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGGAGCGCTCTCTTTTCTaGAGCTTGTTCAAACTCCGG +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKEERSLF*SLFKLR
Trigger: CCGGAGTTTGAACAAGCTTCAGAAAAGAGAGCGCTC...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTTTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTTCCTCCACAGTATaGAGCAACATGGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRLSSTV*SNMVAA
Trigger: TGCGGCCACCATGTTGCTTCATACTGTGGAGGAAAG...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAGGACAAAGGCCACTCTaGTCTCTCCATTTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQGQRPL*SLHFGH
Trigger: ATGGCCGAAATGGAGAGATCAGAGTGGCCTTTGTCC...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCGGACAAAGGCCACTCTaGTCTCTCCATTTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRGQRPL*SLHFGH
Trigger: ATGGCCGAAATGGAGAGATCAGAGTGGCCTTTGTCC...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCCAGGAACATCCAGGTaGAGGCAGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRPGTSR*RQPRRR
Trigger: TCTTCTTCTTGGCTGCCTTCACCTGGATGTTCCTGG...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGACGGATTCGGCTCTGTaGGCCTGTGGAGTAGCGTCC +
Preference number: 4 (lower is better)
Translates to: WRSSVCSLVSKGKKLSLWTDSAL*ACGVAS
Trigger: GGACGCTACTCCACAGGCTCACAGAGCCGAATCCGT...CCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTAATAAAGGAAGACTCTaGCTGCTTTCGAACCGTGTC +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESNKGRL*LLSNRV
Trigger: GACACGGTTCGAAAGCAGTCAGAGTCTTCCTTTATT...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCGCATTGCTTATAAGATaGTTAGCCATGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVALLIR*LAMAPL
Trigger: CAGAGGAGCCATGGCTAATCATCTTATAAGCAATGC...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504896.5
ENST00000507164.5
ENST00000508693.5
ENST00000514157.5
CDS-3UTR TCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCAGACTAGTGACCAAATaGGCCGGTCCTTTTGAACTT +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVRLVTK*AGPFEL
Trigger: AAGTTCAAAAGGACCGGCTCATTTGGTCACTAGTCT...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCTTTCTCCCCTGGGCTaGCCTAAAAATCCCATTAAA +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESLSPLG*PKNPIK
Trigger: TTTAATGGGATTTTTAGGTCAGCCCAGGGGAGAAAG...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000506700.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
CDS-3UTR TCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCCCACATTTGTGTTTCTaGAGTTACCATAAACACATC +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGPHLCF*SYHKHI
Trigger: GATGTGTTTATGGTAACTTCAGAAACACAAATGTGG...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512091.6
CDS-3UTR GCA 90 bp CACTGCCAAGGTTATTCACCAGCTTGTTCATCAGATTCCTGTTCTGTTCACTGGCACGATGAGCAGCGGTaGGCTCTGCAGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HCQGYSPACSSDSCSVHWHDEQR*ALQLAA
Trigger: AGCAGCCAGCTGCAGAGCGCACCGCTGCTCATCGTG...CCAGTGAACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR GCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCACAGGATAGCTCTCTaGGGACCACAGCCATTGGAA +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRHRIAL*GPQPLE
Trigger: TTCCAATGGCTGTGGTCCGCAGAGAGCTATCCTGTG...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCCACAGGATAGCTCTCTaGGGACCACAGCCATTGGAA +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLHRIAL*GPQPLE
Trigger: TTCCAATGGCTGTGGTCCGCAGAGAGCTATCCTGTG...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTAAAAACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTKNIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTTTTT...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGATCTTGTCAGATGCCTaGAGAGGGTCTTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKEILSDA*RGSLHH
Trigger: GTGGTGCAAAGACCCTCTGCAGGCATCTGACAAGAT...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTACACTACAAATCCTGTaGCATCCACCCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVTLQIL*HPPCEG
Trigger: TCCCTCACAGGGTGGATGGCACAGGATTTGTAGTGT...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTACACTACAAATCCTGTaGCATCCACCCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTTLQIL*HPPCEG
Trigger: TCCCTCACAGGGTGGATGGCACAGGATTTGTAGTGT...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCGGTCTATGTCAGATTTaGCTCCCCATCGGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRGLCQI*LPIGKG
Trigger: CCCCTTACCGATGGGGAGGCAAATCTGACATAGACC...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTCCACCAAACTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGPPNYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGTTTGGTGG...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGTACACCTATAGTTCCTaGAGGGCATGGCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKEYTYSS*RAWLLC
Trigger: GCAAAGCAGCCATGCCCTGCAGGAACTATAGGTGTA...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCCTAAGTTTCCTTCTGTaGTCAGTCTTGCAACTTCCA +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLLSFLL*SVLQLP
Trigger: TGGAAGTTGCAAGACTGAGCACAGAAGGAAACTTAG...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTCCATTTCGGCCATTTTaGTTTAAGGTATTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGPFRPF*FKVFAD
Trigger: GTCTGCAAATACCTTAAAGCAAAATGGCCGAAATGG...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCTCTTTGTTTATTGCTaGCGTAATAACAGGGGAATT +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSLFVYC*RNNRGI
Trigger: AATTCCCCTGTTATTACGGCAGCAATAAACAAAGAG...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCCTCTTTGTTTATTGCTaGCGTAATAACAGGGGAATT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGLFVYC*RNNRGI
Trigger: AATTCCCCTGTTATTACGGCAGCAATAAACAAAGAG...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCCTTAACTTCCACATGTaGCATCAGTACTGCAAAATT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGLNFHM*HQYCKI
Trigger: AATTTTGCAGTACTGATGGCACATGTGGAAGTTAAG...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCAAGGAAGACTCTGACTaGTTTCGAACCGTGTCATTC +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVKEDSD*FRTVSF
Trigger: GAATGACACGGTTCGAAAGCAGTCAGAGTCTTCCTT...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCAGCCTAGGTTTGGCATaGTTTTGTAGTAAACATCTT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGSLGLA*FCSKHL
Trigger: AAGATGTTTACTACAAAAGCATGCCAAACCTAGGCT...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGAGCCTAGGTTTGGCATaGTTTTGTAGTAAACATCTT +
Preference number: 4 (lower is better)
Translates to: GLGAGGNTLCGGHTSQCRSLGLA*FCSKHL
Trigger: AAGATGTTTACTACAAAAGCATGCCAAACCTAGGCT...CCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCAAAGGAAGGAAACTTTaGTCTCTTACTGGTAGACAA +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSVAATPASVGKGRKL*SLTGRQ
Trigger: TTGTCTACCAGTAAGAGAGCAAAGTTTCCTTCCTTT...GCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512091.6
CDS-3UTR CCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCCTCAGCGTGTCGCAATaGAGCAGCAAGGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIILSVSQ*SSKGRM
Trigger: CATCCTGCCCTTGCTGCTCCATTGCGACACGCTGAG...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR CCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCTCCTGGACACGGGTCTaGAAAAACATCAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRSWTRV*KNIRTC
Trigger: GCAGGTCCTGATGTTTTTCCAGACCCGTGTCCAGGA...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCTCCTGGACACGGGTCTaGAAAAACATCAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLSWTRV*KNIRTC
Trigger: GCAGGTCCTGATGTTTTTCCAGACCCGTGTCCAGGA...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCGTATTTATAGGTTCCTaGACACGGGTCTGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLVFIGS*TRVWKN
Trigger: GTTTTTCCAGACCCGTGTCCAGGAACCTATAAATAC...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGGGTGGTACTCCTTCCTaGGCTCAAAGTTGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLGGTPS*AQSCGP
Trigger: CGGACCACAACTTTGAGCCCAGGAAGGAGTACCACC...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCTGGCAATGCTGTAACTATTGCCATGCTGACACTGACGGGGTaGTACTCCTTCCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAAGNAVTIAMLTLTG*YSFLGS
Trigger: TGAGCCCAGGAAGGAGTACCACCCCGTCAGTGTCAG...CATGGCAATAGTTACAGCATTGCCAGCGGCGAATACCTGAGCAACTGTGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAATCGAGAGCTGGGATTTaGGACGATGCTGATGGAAGG +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQSRAGI*DDADGR
Trigger: CCTTCCATCAGCATCGTCCCAAATCCCAGCTCTCGA...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCTCGAGAGCTGGGATTTaGGACGATGCTGATGGAAGG +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRSRAGI*DDADGR
Trigger: CCTTCCATCAGCATCGTCCCAAATCCCAGCTCTCGA...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCAGTTCCTGCAGGGCATaGCTGCTTTGCTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRSSCRA*LLCYLS
Trigger: GGACAGATAGCAAAGCAGCCATGCCCTGCAGGAACT...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTAGGAGGCCTACCAGCTaGTCCATGGCCCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: TGDLLCARWLAKGKSSHCRRPTS*SMARTE
Trigger: CTCTGTCCGGGCCATGGACCAGCTGGTAGGCCTCCT...ACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTAACAGCACAGGCAATTaGTTGGTCAGTTCGGTTGAT +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESNSTGN*LVSSVD
Trigger: ATCAACCGAACTGACCAACCAATTGCCTGTGCTGTT...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCTGGCAATGCTGTAACTATTGCCATGGGCTCTGTGAGCCTGTaGAGTAGCGTCCAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAAGNAVTIAMGSVSL*SSVQEF
Trigger: GAACTCCTGGACGCTACTCCACAGGCTCACAGAGCC...CATGGCAATAGTTACAGCATTGCCAGCGGCGAATACCTGAGCAACTGTGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGGCTGGTGGTTCTCGGTaGAGTATACTCTTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLAGGSR*SILLGA
Trigger: TGCCCCCAAGAGTATACTCCACCGAGAACCACCAGC...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTTCTGGTATAATGGTGTaGCTGGTGGTTCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTSGIMV*LVVLGG
Trigger: TCCACCGAGAACCACCAGCCACACCATTATACCAGA...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTAAAAAGCTCTCACTGTaGTCTTGGGGGATCCGCCTT +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVKKLSL*SWGIRL
Trigger: AAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTT...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTTCTCTATGGGGTGACTaGAGATCTTCTGTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTSLWGD*RSSVCS
Trigger: CGAGCACACAGAAGATCTCCAGTCACCCCATAGAGA...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGACCACATTTGGCCGGTaGGGGTTCGGTCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: WRSSVCSLVSKGKKLSLWTTFGR*GFGLGA
Trigger: AGCACCCAGACCGAACCCCCACCGGCCAAATGTGGT...CCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCGATGGACGTGGTTTCTaGAGCCTAGGTTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLDGRGF*SLGLAC
Trigger: GCATGCCAAACCTAGGCTCCAGAAACCACGTCCATC...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CTCTATGGGGTGACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAATCTGCAGCTGGCTGCTaGAGCAGATGTCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LYGVTGDLLCARWLAKGKSAAGC*SRCLGG
Trigger: TCCACCCAGACATCTGCTTCAGCAGCCAGCTGCAGA...TTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGTCACCCCATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR TCA 90 bp TGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTGCAGCTGGCTGCTaGAGCAGATGTCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: WRSSVCSLVSKGKKLSLWSAAGC*SRCLGG
Trigger: TCCACCCAGACATCTGCTTCAGCAGCCAGCTGCAGA...CCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR TCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCGAGAAGAACAGTTGCTaGGATCTGGACCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLEKNSC*DLDLGD
Trigger: ATCCCCAAGGTCCAGATCTCAGCAACTGTTCTTCTC...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CACTGCCAAGGTTATTCACCAGCTTGTTCATCAGATTCCTGTTCTGTTCACTGGGTGGCCGCACGCAGCTaGTCACTCGTAGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: HCQGYSPACSSDSCSVHWVAARS*SLVVRS
Trigger: AGACCTGACTACGAGTGATCAGCTGCGTGCGGCCAC...CCAGTGAACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCGGAGTAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLGVAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTACTCC...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKEPTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGG...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTAAATTCCAACCCACGTaGTCACATCCAGAAGGAGGT +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTKFQPT*SHPEGG
Trigger: ACCTCCTTCTGGATGTGATCACGTGGGTTGGAATTT...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCGTTGGTCAGTTCGGTTaGTCCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLVGQFG*SQSGRA
Trigger: TGCTCTTCCTGATTGGGATCAACCGAACTGACCAAC...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGGTGCGTTGTACATGCTaGCAGAAGGGTTGTTACAGA +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKEVRCTC*QKGCYR
Trigger: TCTGTAACAACCCTTCTGTCAGCATGTACAACGCAC...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000504896.5
ENST00000507164.5
ENST00000508693.5
ENST00000514157.5
CDS-3UTR TCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTGCATCAGATTCCTCATaGATGAGTTCCAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVASDSS*MSSRPK
Trigger: TTTGGGCCTGGAACTCATTCATGAGGAATCTGATGC...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CTCTATGGGGTGACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAATGAGCCGGTCCTTTTaGACTTCCCTCGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: LYGVTGDLLCARWLAKGKMSRSF*TSLGRG
Trigger: ACCCCTCCCGAGGGAAGTTCAAAAGGACCGGCTCAT...TTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGTCACCCCATAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCAAAAACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRKNIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTTTTT...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAATCTTGTCAGATGCCTaGAGAGGGTCTTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQILSDA*RGSLHH
Trigger: GTGGTGCAAAGACCCTCTGCAGGCATCTGACAAGAT...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCCCACCAAACTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLPPNYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGTTTGGTGG...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCTACACCTATAGTTCCTaGAGGGCATGGCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLYTYSS*RAWLLC
Trigger: GCAAAGCAGCCATGCCCTGCAGGAACTATAGGTGTA...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCCCTGGACATAGGCTCTaGAAGAGCGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLPGHRL*KSALFS
Trigger: AGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGG...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGAGTCAGGTCTCTCCATaGATTCAAAGCTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKESQVSP*IQSLWL
Trigger: CAGCCACAAGCTTTGAATGCATGGAGAGACCTGACT...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCCCATTTCGGCCATTTTaGTTTAAGGTATTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLPFRPF*FKVFAD
Trigger: GTCTGCAAATACCTTAAAGCAAAATGGCCGAAATGG...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAATGGACCGCATCACTGTaGTTAACTTCCACATGTGCC +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQWTASL*LTSTCA
Trigger: GGCACATGTGGAAGTTAAGCACAGTGATGCGGTCCA...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCAACTCTCTGTACTTTTaGCACTACAGCAATGTGTTC +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLNSLYF*HYSNVF
Trigger: GAACACATTGCTGTAGTGGCAAAAGTACAGAGAGTT...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTCATCTTCCCTTCCACTaGCAAGGTTATTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTHLPFH*QGYSPA
Trigger: AGCTGGTGAATAACCTTGGCAGTGGAAGGGAAGATG...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CTCTATGGGGTGACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAACTCAGCGTGTCGCAATaGAGCAGCAAGGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: LYGVTGDLLCARWLAKGKLSVSQ*SSKGRM
Trigger: CATCCTGCCCTTGCTGCTCCATTGCGACACGCTGAG...TTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGTCACCCCATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR CCA 90 bp TGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGAAGCAGATGTCTGGGTaGAAGAGCGCCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: WRSSVCSLVSKGKKLSLWKQMSG*KSASWA
Trigger: AGCCCAGGAGGCGCTCTTCCACCCAGACATCTGCTT...CCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR CCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCGATGACGTCTGTTCCTaGACAGCGAAGCTCTATAGG +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRDDVCS*TAKLYR
Trigger: CCTATAGAGCTTCGCTGTCCAGGAACAGACGTCATC...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCTTGTAGGTTGTAGTTaGTCTTCCAGCAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESLVGCS*SSSNEV
Trigger: GACTTCATTGCTGGAAGACCAACTACAACCTACAAG...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCCTGGGCTCAAAGTTGTaGTCCGAAGGGTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIILGSKL*SEGWYW
Trigger: CCAGTACCACCCTTCGGACCACAACTTTGAGCCCAG...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGTCGAGAGCTGGGATTTaGGACGATGCTGATGGAAGG +
Preference number: 4 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLSRAGI*DDADGR
Trigger: CCTTCCATCAGCATCGTCCCAAATCCCAGCTCTCGA...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTACAGTTGCTGAGATCTaGACCTTGGGGATCCCAAAT +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTTVAEI*TLGIPN
Trigger: ATTTGGGATCCCCAAGGTCCAGATCTCAGCAACTGT...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTACTATCTTTTCCACCTaGGGTCAAGTTCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTTIFST*GQVPKL
Trigger: CAGCTTCGGAACTTGACCCCAGGTGGAAAAGATAGT...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAGTATTTGCAGACAGCTaGATAGTGCTTCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQVFADS*IVLPWP
Trigger: GGGCCATGGAAGCACTATCCAGCTGTCTGCAAATAC...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCGCAAAATTTGTTAGGTaGTTACAAGAGCATGTAGTA +
Preference number: 4 (lower is better)
Translates to: WGFGLGAGGNTLCGGHTSAKFVR*LQEHVV
Trigger: TACTACATGCTCTTGTAACCACCTAACAAATTTTGC...GCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGCACCCAGACCGAACCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAGCACAGGCAATTGGTTaGTCAGTTCGGTTGATCCCA +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQAQAIG*SVRLIP
Trigger: TGGGATCAACCGAACTGACCAACCAATTGCCTGTGC...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCTTTTCCCTGAACCAATaGAACTCTCTGTACTTTTGC +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLFSLNQ*NSLYFC
Trigger: GCAAAAGTACAGAGAGTTCCATTGGTTCAGGGAAAA...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTTCAGGTATTCGCCGCTaGCAATGCTGTAACTATTGC +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVSGIRR*QCCNYC
Trigger: GCAATAGTTACAGCATTGCCAGCGGCGAATACCTGA...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCCCCAAACTCTCCTCGTaGTTAAACGAGGTGGCATCA +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLPKLSS*LNEVAS
Trigger: TGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGG...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAACCCAAACTCTCCTCGTaGTTAAACGAGGTGGCATCA +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQPKLSS*LNEVAS
Trigger: TGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGG...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCTCTGGTATAATGGTGTaGCTGGTGGTTCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRSGIMV*LVVLGG
Trigger: TCCACCGAGAACCACCAGCCACACCATTATACCAGA...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCTGGCAATGCTGTAACTATTGCCATGGGGGGATCCGCCTTCTaGTATAATGGTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAAGNAVTIAMGGSAF*YNGVAG
Trigger: ACCAGCCACACCATTATACCAGAAGGCGGATCCCCC...CATGGCAATAGTTACAGCATTGCCAGCGGCGAATACCTGAGCAACTGTGTGCAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCGGGGGATCCGCCTTCTaGTATAATGGTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIIGGSAF*YNGVAG
Trigger: ACCAGCCACACCATTATACCAGAAGGCGGATCCCCC...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTGGGGGTTCGGTCTaGGTGCTGGTGGTAACACTC +
Preference number: 4 (lower is better)
Translates to: TGDLLCARWLAKGKSSHCGGGSV*VLVVTL
Trigger: GAGTGTTACCACCAGCACCCAGACCGAACCCCCACC...ACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTCGGCATCACCACATTTaGCCGGTGGGGGTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: TGDLLCARWLAKGKSSHCRHHHI*PVGVRS
Trigger: AGACCGAACCCCCACCGGCCAAATGTGGTGATGCCG...ACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCGGTCCCATCTTTGTTTaGAGGAACTATAAATCCATC +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLGPIFV*RNYKSI
Trigger: GATGGATTTATAGTTCCTCCAAACAAAGATGGGACC...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTGAAGTCATCCTTGGATaGATACTCAGTCAGGGTATC +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTEVILG*ILSQGI
Trigger: GATACCCTGACTGAGTATTCATCCAAGGATGACTTC...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTTGGTGCGCTCTTTGTTaGAGAACAAAGCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVWCALC*RTKLHH
Trigger: ATGATGGAGCTTTGTTCTTCAACAAAGAGCGCACCA...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTTGGCGGAGAAATGTATaGAACTTGTCCATGATGTGC +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVWRRNV*NLSMMC
Trigger: GCACATCATGGACAAGTTTCATACATTTCTCCGCCA...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGGAGAAGAACAGTTGCTaGGATCTGGACCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLEKNSC*DLDLGD
Trigger: ATCCCCAAGGTCCAGATCTCAGCAACTGTTCTTCTC...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTTTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCCTTTCCTCCACAGTATaGAGCAACATGGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIILSSTV*SNMVAA
Trigger: TGCGGCCACCATGTTGCTTCATACTGTGGAGGAAAG...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTTGTCTGTATTCTCCCTaGCAATGTCAGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESCLYSP*QCQSSK
Trigger: TTTTGAAGACTGACATTGTCAGGGAGAATACAGACA...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCGGACAAAGGCCACTCTaGTCTCTCCATTTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIIGQRPL*SLHFGH
Trigger: ATGGCCGAAATGGAGAGATCAGAGTGGCCTTTGTCC...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTGGAGTAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESGVAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTACTCC...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCCCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLPTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGG...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAAATTCCAACCCACGTaGTCACATCCAGAAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQKFQPT*SHPEGG
Trigger: ACCTCCTTCTGGATGTGATCACGTGGGTTGGAATTT...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCCTGCTACAAAGAGACTaGTGCAGAGGTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLLLQRD*CRGSCG
Trigger: TCCACAAGAACCTCTGCATCAGTCTCTTTGTAGCAG...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCCCAGGAACATCCAGGTaGAGGCAGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIIPGTSR*RQPRRR
Trigger: TCTTCTTCTTGGCTGCCTTCACCTGGATGTTCCTGG...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGCTGACACAGCCACAATaGGTGCAGGCATCCCATAGC +
Preference number: 4 (lower is better)
Translates to: WRSSVCSLVSKGKKLSLWLTQPQ*VQASHS
Trigger: GCTATGGGATGCCTGCACTCATTGTGGCTGTGTCAG...CCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCGTAGTCTACTGCAGCTaGCACAGCCACAATGAGTGC +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIIVVYCS*HSHNEC
Trigger: GCACTCATTGTGGCTGTGTCAGCTGCAGTAGACTAC...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp AGTGTCCTGGTGATGAACTGCTTGCCAAATATGCTTTGCATTACAACAGACGTGACGGATTCGGCTCTGTaGGCCTGTGGAGTAGCGTCC +
Preference number: 4 (lower is better)
Translates to: SVLVMNCLPNMLCITTDVTDSAL*ACGVAS
Trigger: GGACGCTACTCCACAGGCTCACAGAGCCGAATCCGT...CACGTCTGTTGTAATGCAAAGCATATTTGGCAAGCAGTTCATCACCAGGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
CDS-3UTR TCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTAATAAAGGAAGACTCTaGCTGCTTTCGAACCGTGTC +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTNKGRL*LLSNRV
Trigger: GACACGGTTCGAAAGCAGTCAGAGTCTTCCTTTATT...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTGCATTGCTTATAAGATaGTTAGCCATGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVALLIR*LAMAPL
Trigger: CAGAGGAGCCATGGCTAATCATCTTATAAGCAATGC...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000504896.5
ENST00000507164.5
ENST00000508693.5
ENST00000514157.5
CDS-3UTR TCA 90 bp ACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTATGAGCCGGTCCTTTTaGACTTCCCTCGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: TGDLLCARWLAKGKSSHCMSRSF*TSLGRG
Trigger: ACCCCTCCCGAGGGAAGTTCAAAAGGACCGGCTCAT...ACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCACCAAAAACCCTATGTaGTACAGTTTTGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVTKNPM*YSFALL
Trigger: GAGCAAAGCAAAACTGTATCACATAGGGTTTTTGGT...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512091.6
CDS-3UTR GCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTATGAAAATTAGTAGCTaGGATGGCCACATGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVMKISS*DGHMAV
Trigger: GACAGCCATGTGGCCATCGCAGCTACTAATTTTCAT...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTATGAAAATTAGTAGCTaGGATGGCCACATGGCTGTC +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTMKISS*DGHMAV
Trigger: GACAGCCATGTGGCCATCGCAGCTACTAATTTTCAT...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCTGGCAATGCTGTAACTATTGCCATGCACAGGATAGCTCTCTaGGGACCACAGCCATTGGAA +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAAGNAVTIAMHRIAL*GPQPLE
Trigger: TTCCAATGGCTGTGGTCCGCAGAGAGCTATCCTGTG...CATGGCAATAGTTACAGCATTGCCAGCGGCGAATACCTGAGCAACTGTGTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGACACTACAAATCCTGTaGCATCCACCCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLTLQIL*HPPCEG
Trigger: TCCCTCACAGGGTGGATGGCACAGGATTTGTAGTGT...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCCCATTTCGGCCATTTTaGTTTAAGGTATTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVPFRPF*FKVFAD
Trigger: GTCTGCAAATACCTTAAAGCAAAATGGCCGAAATGG...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCCTTAACTTCCACATGTaGCATCAGTACTGCAAAATT +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLLNFHM*HQYCKI
Trigger: AATTTTGCAGTACTGATGGCACATGTGGAAGTTAAG...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAGGATTGTTAGTACCATaGGGACGAAGCAGAGCATTG +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQGLLVP*GRSRAL
Trigger: CAATGCTCTGCTTCGTCCGCATGGTACTAACAATCC...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000504896.5
ENST00000507164.5
ENST00000508693.5
ENST00000514157.5
CDS-3UTR GCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCTCTGTAGGGCTCTTGTaGGTTGTACATGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRSVGLL*VVHADR
Trigger: TCTGTCAGCATGTACAACGCACAAGAGCCCTACAGA...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000504896.5
ENST00000507164.5
ENST00000508693.5
ENST00000514157.5
CDS-3UTR GCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAATTCGCCGCTGGCAATaGTGTAACTATTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQIRRWQ*CNYCHG
Trigger: ACCATGGCAATAGTTACAGCATTGCCAGCGGCGAAT...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCATTCGCCGCTGGCAATaGTGTAACTATTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLIRRWQ*CNYCHG
Trigger: ACCATGGCAATAGTTACAGCATTGCCAGCGGCGAAT...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTCCACGGTCTATGATTTaGACACAGTTGCTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVPRSMI*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATCATAGACCGTGG...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTCCACGGTCTATGATTTaGACACAGTTGCTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTPRSMI*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATCATAGACCGTGG...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCAGCCTAGGTTTGGCATaGTTTTGTAGTAAACATCTT +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLSLGLA*FCSKHL
Trigger: AAGATGTTTACTACAAAAGCATGCCAAACCTAGGCT...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp TGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGCGGCAGCTATTAACATaGGGCAGTCATAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: WRSSVCSLVSKGKKLSLWRQLLT*GSHSWG
Trigger: GCCCCAGCTATGACTGCCGCATGTTAATAGCTGCCG...CCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512091.6
CDS-3UTR CCA 90 bp CCTTCCACTGCCAAGGTTATTCACCAGCTTGTTCATCAGATTCCTGTTCTGTTCGCAATCTGTGCTCCTTaGGCACCTGGACCGCGAACT +
Preference number: 4 (lower is better)
Translates to: PSTAKVIHQLVHQIPVLFAICAP*APGPRT
Trigger: AGTTCGCGGTCCAGGTGCCCAAGGAGCACAGATTGC...GAACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGTGGAAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR CCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGGATGACGTCTGTTCCTaGACAGCGAAGCTCTATAGG +
Preference number: 4 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLDDVCS*TAKLYR
Trigger: CCTATAGAGCTTCGCTGTCCAGGAACAGACGTCATC...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCCACCACGCCCCAGATTaGTGGTCGGACTCAAACAAA +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIIHHAPD*WSDSNK
Trigger: TTTGTTTGAGTCCGACCACCAATCTGGGGCGTGGTG...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGCTGGGCTCAAAGTTGTaGTCCGAAGGGTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: WRSSVCSLVSKGKKLSLWLGSKL*SEGWYW
Trigger: CCAGTACCACCCTTCGGACCACAACTTTGAGCCCAG...CCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCTGATGGAAGGTGTGTaGTCATGTCATCAAGTACCT +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKELMEGV*SCHQVP
Trigger: AGGTACTTGATGACATGACCACACACCTTCCATCAG...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCACAGTTGCTGAGATCTaGACCTTGGGGATCCCAAAT +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLTVAEI*TLGIPN
Trigger: ATTTGGGATCCCCAAGGTCCAGATCTCAGCAACTGT...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCACTATCTTTTCCACCTaGGGTCAAGTTCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRTIFST*GQVPKL
Trigger: CAGCTTCGGAACTTGACCCCAGGTGGAAAAGATAGT...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCTATGAAGCAACATGGTaGCCGCACGCAGCTGATCAC +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIIYEATW*PHAADH
Trigger: GTGATCAGCTGCGTGCGGCCACCATGTTGCTTCATA...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCATGCAGAGGTTCTTGTaGATGGTGTTACGGTCACTC +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRMQRFL*MVLRSL
Trigger: GAGTGACCGTAACACCATCCACAAGAACCTCTGCAT...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTAACAGCACAGGCAATTaGTTGGTCAGTTCGGTTGAT +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTNSTGN*LVSSVD
Trigger: ATCAACCGAACTGACCAACCAATTGCCTGTGCTGTT...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTTTTTCCCTGAACCAATaGAACTCTCTGTACTTTTGC +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESFSLNQ*NSLYFC
Trigger: GCAAAAGTACAGAGAGTTCCATTGGTTCAGGGAAAA...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCGGTGGAGTATACTCTTaGGGGCAGCAAAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIIGGVYS*GQQRSI
Trigger: GATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACC...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CTCTATGGGGTGACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAGCTGGTGGTTCTCGGTaGAGTATACTCTTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LYGVTGDLLCARWLAKGKAGGSR*SILLGA
Trigger: TGCCCCCAAGAGTATACTCCACCGAGAACCACCAGC...TTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGTCACCCCATAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGTCTGGTATAATGGTGTaGCTGGTGGTTCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLSGIMV*LVVLGG
Trigger: TCCACCGAGAACCACCAGCCACACCATTATACCAGA...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCTTCTGTGTGCTCGTTaGTTAGCAAAGGGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKELLCAR*LAKGKS
Trigger: GCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAG...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ACTGCCAAGGTTATTCACCAGCTTGTTCATCAGATTCCTGTTCTGTTCACTGGAGGTGGGGGTTCGGTCTaGGTGCTGGTGGTAACACTC +
Preference number: 4 (lower is better)
Translates to: TAKVIHQLVHQIPVLFTGGGGSV*VLVVTL
Trigger: GAGTGTTACCACCAGCACCCAGACCGAACCCCCACC...TCCAGTGAACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCTGGCAATGCTGTAACTATTGCCATGGATGGACGTGGTTTCTaGAGCCTAGGTTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAAGNAVTIAMDGRGF*SLGLAC
Trigger: GCATGCCAAACCTAGGCTCCAGAAACCACGTCCATC...CATGGCAATAGTTACAGCATTGCCAGCGGCGAATACCTGAGCAACTGTGTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCGATGGACGTGGTTTCTaGAGCCTAGGTTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIIDGRGF*SLGLAC
Trigger: GCATGCCAAACCTAGGCTCCAGAAACCACGTCCATC...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCTGGCAATGCTGTAACTATTGCCATGCACAGCCATTGGAATTaGGGCACGGCTGAAAGCATG +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAAGNAVTIAMHSHWN*GTAESM
Trigger: CATGCTTTCAGCCGTGCCCCAATTCCAATGGCTGTG...CATGGCAATAGTTACAGCATTGCCAGCGGCGAATACCTGAGCAACTGTGTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCTGGTGGTAACACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTCAATCAGTTGTTTATTaGTTGGCAAACAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: AGGNTLCGGHTSQCRHAGQSVVY*LANKFH
Trigger: GTGAAACTTGTTTGCCAACCAATAAACAACTGATTG...ACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTGTTACCACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512091.6
3UTR CAA 72 bp GGCGGTCTCGTTATGGTTATAGCCACGGTCTATGATTaGCACACAGTTGCTCAGGTATTCGCCGCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: GGLVMVIATVYD*HTVAQVFAAGN
Trigger: ATTGCCAGCGGCGAATACCTGAGCAACTGTGTGCAAATCATAGACCGTGGCTATAACCATAACGAGACCGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
3UTR CAA 72 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTaGGGGGCAGCAAAGGAGCATCAGATTCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSIL*GAAKEHQIPHE
Trigger: TTCATGAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGCTGTGCTTGCCACCATaGATTATTGGAGCTAAGAGC +
Preference number: 4 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLLCLPP*IIGAKS
Trigger: GCTCTTAGCTCCAATAATTCATGGTGGCAAGCACAG...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR TCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCTGGTGCGCTCTTTGTTaGAGAACAAAGCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLWCALC*RTKLHH
Trigger: ATGATGGAGCTTTGTTCTTCAACAAAGAGCGCACCA...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGTTTGCTATCTGTCCTTaGCGAGTCTTAAACCACATG +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKEFAICP*RVLNHM
Trigger: CATGTGGTTTAAGACTCGTCAAGGACAGATAGCAAA...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTAACTTCTGTGTTATATaGTTGACCCAAGGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESNFCVI*LTQGEE
Trigger: TTCTTCTCCTTGGGTCAATCATATAACACAGAAGTT...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCAACTTCTGTGTTATATaGTTGACCCAAGGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVNFCVI*LTQGEE
Trigger: TTCTTCTCCTTGGGTCAATCATATAACACAGAAGTT...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCGAGCGCTCTCTTTTCTaGAGCTTGTTCAAACTCCGG +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIIERSLF*SLFKLR
Trigger: CCGGAGTTTGAACAAGCTTCAGAAAAGAGAGCGCTC...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp AGAAAGGAAGGAAACTTTGCTCTCTTACTGGTAGACAAACTTGCAAGACCAGCAGTGGCCGCACGCAGCTaGTCACTCGTAGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RKEGNFALLLVDKLARPAVAARS*SLVVRS
Trigger: AGACCTGACTACGAGTGATCAGCTGCGTGCGGCCAC...TGCTGGTCTTGCAAGTTTGTCTACCAGTAAGAGAGCAAAGTTTCCTTCCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
CDS-3UTR TCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCTGGCAATGCTGTAACTATTGCCATGGTTGGTCAGTTCGGTTaGTCCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAAGNAVTIAMVGQFG*SQSGRA
Trigger: TGCTCTTCCTGATTGGGATCAACCGAACTGACCAAC...CATGGCAATAGTTACAGCATTGCCAGCGGCGAATACCTGAGCAACTGTGTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAATAAAGGAAGACTCTaGCTGCTTTCGAACCGTGTC +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQNKGRL*LLSNRV
Trigger: GACACGGTTCGAAAGCAGTCAGAGTCTTCCTTTATT...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTTCAGAAGCCCCTATTTaGTATGCAATGTTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: HSLWRPHQPVSACWYRESSEAPI*YAMFSF
Trigger: AAAGCTAAACATTGCATATCAAATAGGGGCTTCTGA...ACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGGCATCAGATTCCTCATaGATGAGTTCCAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLASDSS*MSSRPK
Trigger: TTTGGGCCTGGAACTCATTCATGAGGAATCTGATGC...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCTGGCAATGCTGTAACTATTGCCATGAGAGTCTCTATGGGGTaGCTGGAGATCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAAGNAVTIAMRVSMG*LEIFCV
Trigger: CACACAGAAGATCTCCAGTCACCCCATAGAGACTCT...CATGGCAATAGTTACAGCATTGCCAGCGGCGAATACCTGAGCAACTGTGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCAGACTAGTGACCAAATaGGCCGGTCCTTTTGAACTT +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRRLVTK*AGPFEL
Trigger: AAGTTCAAAAGGACCGGCTCATTTGGTCACTAGTCT...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp CTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCAATTTCTGTGTCACACGATGAGCAGCGGTaGGCTCTGCAGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LRTVNKVLAVLLVPISVSHDEQR*ALQLAA
Trigger: AGCAGCCAGCTGCAGAGCGCACCGCTGCTCATCGTG...TGACACAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000506720.5
ENST00000506746.5
ENST00000507164.5
ENST00000507625.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR GCA 90 bp CCACTGCTTATATCAACTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTCACGATGAGCAGCGGTaGGCTCTGCAGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PLLISTQNSQQGVSSFVGHDEQR*ALQLAA
Trigger: AGCAGCCAGCTGCAGAGCGCACCGCTGCTCATCGTG...ACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAGTTGATATAAGCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000506720.5
ENST00000506746.5
ENST00000507164.5
ENST00000507625.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR GCA 90 bp CAACTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCAATTTCTGTGCACGATGAGCAGCGGTaGGCTCTGCAGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLRTVNKVLAVLLVPISVHDEQR*ALQLAA
Trigger: AGCAGCCAGCTGCAGAGCGCACCGCTGCTCATCGTG...CACAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000506720.5
ENST00000506746.5
ENST00000507164.5
ENST00000507625.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR GCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCTGGCAATGCTGTAACTATTGCCATGATCTTGTCAGATGCCTaGAGAGGGTCTTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAAGNAVTIAMILSDA*RGSLHH
Trigger: GTGGTGCAAAGACCCTCTGCAGGCATCTGACAAGAT...CATGGCAATAGTTACAGCATTGCCAGCGGCGAATACCTGAGCAACTGTGTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCTGGCAATGCTGTAACTATTGCCATGACACTACAAATCCTGTaGCATCCACCCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAAGNAVTIAMTLQIL*HPPCEG
Trigger: TCCCTCACAGGGTGGATGGCACAGGATTTGTAGTGT...CATGGCAATAGTTACAGCATTGCCAGCGGCGAATACCTGAGCAACTGTGTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCTGGACCGCATCACTGTaGTTAACTTCCACATGTGCC +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIIWTASL*LTSTCA
Trigger: GGCACATGTGGAAGTTAAGCACAGTGATGCGGTCCA...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAAGGAAGACTCTGACTaGTTTCGAACCGTGTCATTC +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQKEDSD*FRTVSF
Trigger: GAATGACACGGTTCGAAAGCAGTCAGAGTCTTCCTT...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCCACGGTCTATGATTTaGACACAGTTGCTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRPRSMI*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATCATAGACCGTGG...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCCCACGGTCTATGATTTaGACACAGTTGCTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLPRSMI*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATCATAGACCGTGG...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCGTCCTGGTGATGAACTaGTTGCCAAATATGCTTTGC +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLVLVMN*LPNMLC
Trigger: GCAAAGCATATTTGGCAAGCAGTTCATCACCAGGAC...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512091.6
CDS-3UTR CCA 90 bp TCAACTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCAATTTCTGTTGGAAGAGCGCCTCCTaGGCTGCGCTCAGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: STQNSQQGVSSFVGSNFCWKSAS*AALSVS
Trigger: CGACACGCTGAGCGCAGCCCAGGAGGCGCTCTTCCA...ACAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000506720.5
ENST00000506746.5
ENST00000507164.5
ENST00000507625.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
CDS-3UTR CCA 90 bp GCATCACCACATTTGGCCGGTGGGGGTTCGGTCTGGGTGCTGGTGGTAACACTCAATCTTATAGGCATCTaGCAGATAACATCGGATATT +
Preference number: 4 (lower is better)
Translates to: ASPHLAGGGSVWVLVVTLNLIGI*QITSDI
Trigger: AATATCCGATGTTATCTGCCAGATGCCTATAAGATT...GAGTGTTACCACCAGCACCCAGACCGAACCCCCACCGGCCAAATGTGGTGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTGTATTTATAGGTTCCTaGACACGGGTCTGGAAAAAC +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTVFIGS*TRVWKN
Trigger: GTTTTTCCAGACCCGTGTCCAGGAACCTATAAATAC...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CTCTATGGGGTGACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAACACCACGCCCCAGATTaGTGGTCGGACTCAAACAAA +
Preference number: 4 (lower is better)
Translates to: LYGVTGDLLCARWLAKGKHHAPD*WSDSNK
Trigger: TTTGTTTGAGTCCGACCACCAATCTGGGGCGTGGTG...TTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGTCACCCCATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTCTTGTAGGTTGTAGTTaGTCTTCCAGCAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTLVGCS*SSSNEV
Trigger: GACTTCATTGCTGGAAGACCAACTACAACCTACAAG...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CTCTATGGGGTGACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAACTCGACAGCTGGAGATaGGGTACTAGTACTCCGGTT +
Preference number: 4 (lower is better)
Translates to: LYGVTGDLLCARWLAKGKLDSWR*GTSTPV
Trigger: AACCGGAGTACTAGTACCCCATCTCCAGCTGTCGAG...TTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGTCACCCCATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGACAGTTGCTGAGATCTaGACCTTGGGGATCCCAAAT +
Preference number: 4 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLTVAEI*TLGIPN
Trigger: ATTTGGGATCCCCAAGGTCCAGATCTCAGCAACTGT...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CTGCTTATATCAACTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCAGGAGGCCTACCAGCTaGTCCATGGCCCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: LLISTQNSQQGVSSFVGSRRPTS*SMARTE
Trigger: CTCTGTCCGGGCCATGGACCAGCTGGTAGGCCTCCT...GGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAGTTGATATAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000502815.1
ENST00000504896.5
ENST00000506700.5
ENST00000506720.5
ENST00000506746.5
ENST00000507164.5
ENST00000507625.5
ENST00000508693.5
ENST00000508946.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
ENST00000514591.5
ENST00000514996.5
CDS-3UTR CCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGACTATCTTTTCCACCTaGGGTCAAGTTCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLTIFST*GQVPKL
Trigger: CAGCTTCGGAACTTGACCCCAGGTGGAAAAGATAGT...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CTCTATGGGGTGACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAATATGAAGCAACATGGTaGCCGCACGCAGCTGATCAC +
Preference number: 4 (lower is better)
Translates to: LYGVTGDLLCARWLAKGKYEATW*PHAADH
Trigger: GTGATCAGCTGCGTGCGGCCACCATGTTGCTTCATA...TTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGTCACCCCATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTTGGATAGTGCTTCCATaGCCCATGTTTTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTWIVLP*PMFSGN
Trigger: ATTTCCAGAAAACATGGGCCATGGAAGCACTATCCA...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTTGGATAGTGCTTCCATaGCCCATGTTTTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVWIVLP*PMFSGN
Trigger: ATTTCCAGAAAACATGGGCCATGGAAGCACTATCCA...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTCTGTCATTGTACGCTTaGAGTAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTLSLYA*SSSKMN
Trigger: GTTCATTTTGGAGCTACTCCAAGCGTACAATGACAG...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCAACAGCACAGGCAATTaGTTGGTCAGTTCGGTTGAT +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRNSTGN*LVSSVD
Trigger: ATCAACCGAACTGACCAACCAATTGCCTGTGCTGTT...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp AGTGAATTTCCTCTAAAAAGTGGTAGTGCAGGTGCCCACTTGTTGATCAGACTGGGCTCTGTGAGCCTGTaGAGTAGCGTCCAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: SEFPLKSGSAGAHLLIRLGSVSL*SSVQEF
Trigger: GAACTCCTGGACGCTACTCCACAGGCTCACAGAGCC...CAGTCTGATCAACAAGTGGGCACCTGCACTACCACTTTTTAGAGGAAATTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
CDS-3UTR CCA 90 bp CTCTATGGGGTGACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAGGTGGAGTATACTCTTaGGGGCAGCAAAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: LYGVTGDLLCARWLAKGKGGVYS*GQQRSI
Trigger: GATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACC...TTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGTCACCCCATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CACTGCCAAGGTTATTCACCAGCTTGTTCATCAGATTCCTGTTCTGTTCACTGGGCTGGTGGTTCTCGGTaGAGTATACTCTTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: HCQGYSPACSSDSCSVHWAGGSR*SILLGA
Trigger: TGCCCCCAAGAGTATACTCCACCGAGAACCACCAGC...CCAGTGAACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CACTGCCAAGGTTATTCACCAGCTTGTTCATCAGATTCCTGTTCTGTTCACTGGGGGGGATCCGCCTTCTaGTATAATGGTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: HCQGYSPACSSDSCSVHWGGSAF*YNGVAG
Trigger: ACCAGCCACACCATTATACCAGAAGGCGGATCCCCC...CCAGTGAACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGTG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp AGAAAGGAAGGAAACTTTGCTCTCTTACTGGTAGACAAACTTGCAAGACCAGCAGGTGGGGGTTCGGTCTaGGTGCTGGTGGTAACACTC +
Preference number: 4 (lower is better)
Translates to: RKEGNFALLLVDKLARPAGGGSV*VLVVTL
Trigger: GAGTGTTACCACCAGCACCCAGACCGAACCCCCACC...TGCTGGTCTTGCAAGTTTGTCTACCAGTAAGAGAGCAAAGTTTCCTTCCTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
CDS-3UTR TCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTCCTCATATACAGATTTaGCCACATACAGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTPHIQI*PHTEFH
Trigger: GTGGAATTCTGTATGTGGTCAAATCTGTATATGAGG...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTTGCAATGTACTGGTATaGATTAGGAAAGGGTACATC +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTCNVLV*IRKGYI
Trigger: GATGTACCCTTTCCTAATTCATACCAGTACATTGCA...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTTGCAATGTACTGGTATaGATTAGGAAAGGGTACATC +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVCNVLV*IRKGYI
Trigger: GATGTACCCTTTCCTAATTCATACCAGTACATTGCA...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CTCTATGGGGTGACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAGAGAAGAACAGTTGCTaGGATCTGGACCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LYGVTGDLLCARWLAKGKEKNSC*DLDLGD
Trigger: ATCCCCAAGGTCCAGATCTCAGCAACTGTTCTTCTC...TTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGTCACCCCATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTTCTGTGTTATATGATTaGCCCAAGGAGAAGAACAGT +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVSVLYD*PKEKNS
Trigger: ACTGTTCTTCTCCTTGGGTCAATCATATAACACAGA...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCTGGCAATGCTGTAACTATTGCCATGTCCCCAGCATTCAAGTaGTTTCTTGTCTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAAGNAVTIAMSPAFK*FLVCSA
Trigger: GGCTGAACAGACAAGAAATCACTTGAATGCTGGGGA...CATGGCAATAGTTACAGCATTGCCAGCGGCGAATACCTGAGCAACTGTGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp AGTGTCCTGGTGATGAACTGCTTGCCAAATATGCTTTGCATTACAACAGACGTGCCCGGACAGAGTAGGTaGTGTCCCCAGCATTCAAGT +
Preference number: 4 (lower is better)
Translates to: SVLVMNCLPNMLCITTDVPGQSR*CPQHSS
Trigger: ACTTGAATGCTGGGGACATCACCTACTCTGTCCGGG...CACGTCTGTTGTAATGCAAAGCATATTTGGCAAGCAGTTCATCACCAGGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502815.1
ENST00000512091.6
ENST00000514591.5
CDS-3UTR TCA 90 bp CTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCAATTTCTGTGTCAGTGGCCGCACGCAGCTaGTCACTCGTAGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LRTVNKVLAVLLVPISVSVAARS*SLVVRS
Trigger: AGACCTGACTACGAGTGATCAGCTGCGTGCGGCCAC...TGACACAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000502815.1
ENST00000504896.5
ENST00000506700.5
ENST00000506720.5
ENST00000506746.5
ENST00000507164.5
ENST00000507625.5
ENST00000508693.5
ENST00000508946.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
ENST00000514591.5
ENST00000514996.5
CDS-3UTR TCA 90 bp CAACTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCAATTTCTGTGGTGGCCGCACGCAGCTaGTCACTCGTAGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QLRTVNKVLAVLLVPISVVAARS*SLVVRS
Trigger: AGACCTGACTACGAGTGATCAGCTGCGTGCGGCCAC...CACAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000502815.1
ENST00000504896.5
ENST00000506700.5
ENST00000506720.5
ENST00000506746.5
ENST00000507164.5
ENST00000507625.5
ENST00000508693.5
ENST00000508946.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
ENST00000514591.5
ENST00000514996.5
CDS-3UTR TCA 90 bp CCACTGCTTATATCAACTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTGTGGCCGCACGCAGCTaGTCACTCGTAGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PLLISTQNSQQGVSSFVGVAARS*SLVVRS
Trigger: AGACCTGACTACGAGTGATCAGCTGCGTGCGGCCAC...ACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAGTTGATATAAGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000502815.1
ENST00000504896.5
ENST00000506700.5
ENST00000506720.5
ENST00000506746.5
ENST00000507164.5
ENST00000507625.5
ENST00000508693.5
ENST00000508946.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
ENST00000514591.5
ENST00000514996.5
CDS-3UTR TCA 90 bp ACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTCTTTCCTCCACAGTATaGAGCAACATGGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: TGDLLCARWLAKGKSSHCLSSTV*SNMVAA
Trigger: TGCGGCCACCATGTTGCTTCATACTGTGGAGGAAAG...ACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CACTGCCAAGGTTATTCACCAGCTTGTTCATCAGATTCCTGTTCTGTTCACTGGGGACAAAGGCCACTCTaGTCTCTCCATTTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: HCQGYSPACSSDSCSVHWGQRPL*SLHFGH
Trigger: ATGGCCGAAATGGAGAGATCAGAGTGGCCTTTGTCC...CCAGTGAACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GCCGGTCCTTTTGAACTTCCCTCGGGAGGGGTCCCATCTTTGTTTGGAGGAACTGGAGTAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: AGPFELPSGGVPSLFGGTGVAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTACTCC...AGTTCCTCCAAACAAAGATGGGACCCCTCCCGAGGGAAGTTCAAAAGGACCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp ACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTCCAGGAACATCCAGGTaGAGGCAGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: TGDLLCARWLAKGKSSHCPGTSR*RQPRRR
Trigger: TCTTCTTCTTGGCTGCCTTCACCTGGATGTTCCTGG...ACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp ACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGTAGTCTACTGCAGCTaGCACAGCCACAATGAGTGC +
Preference number: 4 (lower is better)
Translates to: TGDLLCARWLAKGKSSHCVVYCS*HSHNEC
Trigger: GCACTCATTGTGGCTGTGTCAGCTGCAGTAGACTAC...ACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCGTTATCAAGACAGCCTaGTTCAGGTTTCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLVIKTA*FRFQYS
Trigger: GCTATACTGAAACCTGAATCAGGCTGTCTTGATAAC...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAGTTATCAAGACAGCCTaGTTCAGGTTTCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQVIKTA*FRFQYS
Trigger: GCTATACTGAAACCTGAATCAGGCTGTCTTGATAAC...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGACCAGATGTTTTCCCTaGACCAATGGAACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLTRCFP*TNGTLC
Trigger: ACAGAGAGTTCCATTGGTTCAGGGAAAACATCTGGT...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp CTGCTTATATCAACTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCACGGATTCGGCTCTGTaGGCCTGTGGAGTAGCGTCC +
Preference number: 4 (lower is better)
Translates to: LLISTQNSQQGVSSFVGSTDSAL*ACGVAS
Trigger: GGACGCTACTCCACAGGCTCACAGAGCCGAATCCGT...GGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAGTTGATATAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000502815.1
ENST00000504896.5
ENST00000506700.5
ENST00000506720.5
ENST00000506746.5
ENST00000507164.5
ENST00000507625.5
ENST00000508693.5
ENST00000508946.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
ENST00000514591.5
ENST00000514996.5
CDS-3UTR TCA 90 bp CAACTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCAATTTCTGTGACGGATTCGGCTCTGTaGGCCTGTGGAGTAGCGTCC +
Preference number: 4 (lower is better)
Translates to: QLRTVNKVLAVLLVPISVTDSAL*ACGVAS
Trigger: GGACGCTACTCCACAGGCTCACAGAGCCGAATCCGT...CACAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000502815.1
ENST00000504896.5
ENST00000506700.5
ENST00000506720.5
ENST00000506746.5
ENST00000507164.5
ENST00000507625.5
ENST00000508693.5
ENST00000508946.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
ENST00000514591.5
ENST00000514996.5
CDS-3UTR TCA 90 bp CTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCAATTTCTGTGTCAACGGATTCGGCTCTGTaGGCCTGTGGAGTAGCGTCC +
Preference number: 4 (lower is better)
Translates to: LRTVNKVLAVLLVPISVSTDSAL*ACGVAS
Trigger: GGACGCTACTCCACAGGCTCACAGAGCCGAATCCGT...TGACACAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000502815.1
ENST00000504896.5
ENST00000506700.5
ENST00000506720.5
ENST00000506746.5
ENST00000507164.5
ENST00000507625.5
ENST00000508693.5
ENST00000508946.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
ENST00000514591.5
ENST00000514996.5
CDS-3UTR TCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGTATAGCCACGGTCTATaGTTTGCACACAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLYSHGL*FAHSCS
Trigger: TGAGCAACTGTGTGCAAATCATAGACCGTGGCTATA...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCTGGCAATGCTGTAACTATTGCCATGGCATCAGATTCCTCATaGATGAGTTCCAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAAGNAVTIAMASDSS*MSSRPK
Trigger: TTTGGGCCTGGAACTCATTCATGAGGAATCTGATGC...CATGGCAATAGTTACAGCATTGCCAGCGGCGAATACCTGAGCAACTGTGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGAGAGTCTCTATGGGGTaGCTGGAGATCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: WRSSVCSLVSKGKKLSLWRVSMG*LEIFCV
Trigger: CACACAGAAGATCTCCAGTCACCCCATAGAGACTCT...CCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGAGACTAGTGACCAAATaGGCCGGTCCTTTTGAACTT +
Preference number: 4 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLRLVTK*AGPFEL
Trigger: AAGTTCAAAAGGACCGGCTCATTTGGTCACTAGTCT...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR TCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGATCAGCAAGCTGAATTaGGGTAGTTTCCCCATTTTT +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKEISKLN*GSFPIF
Trigger: AAAAATGGGGAAACTACCTCAATTCAGCTTGCTGAT...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512091.6
CDS-3UTR GCA 90 bp ACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTCACAGGATAGCTCTCTaGGGACCACAGCCATTGGAA +
Preference number: 4 (lower is better)
Translates to: TGDLLCARWLAKGKSSHCHRIAL*GPQPLE
Trigger: TTCCAATGGCTGTGGTCCGCAGAGAGCTATCCTGTG...ACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp TGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGATCTTGTCAGATGCCTaGAGAGGGTCTTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: WRSSVCSLVSKGKKLSLWILSDA*RGSLHH
Trigger: GTGGTGCAAAGACCCTCTGCAGGCATCTGACAAGAT...CCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCATCAGATTCCTCATAAATCTTGTCAGATaGCTGCAGAGGGTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: VVLGGVYSWGQQRSIRFLINLVR*LQRVFA
Trigger: TGCAAAGACCCTCTGCAGGCATCTGACAAGATTTAT...GAGGAATCTGATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp ACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTATGTCAGATTTaGCTCCCCATCGGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: TGDLLCARWLAKGKSSHCGLCQI*LPIGKG
Trigger: CCCCTTACCGATGGGGAGGCAAATCTGACATAGACC...ACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp AATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAAAGGAGCCACCAAACTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: NGVAGGSRWSILLGAAKEPPNYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGTTTGGTGG...CTCCTTTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAACTAAGTTTCCTTCTGTaGTCAGTCTTGCAACTTCCA +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQLSFLL*SVLQLP
Trigger: TGGAAGTTGCAAGACTGAGCACAGAAGGAAACTTAG...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp ACTGCCAAGGTTATTCACCAGCTTGTTCATCAGATTCCTGTTCTGTTCACTGGACACAGCCACAATGAGTaGAGGCATCCCATAGCCGAC +
Preference number: 4 (lower is better)
Translates to: TAKVIHQLVHQIPVLFTGHSHNE*RHPIAD
Trigger: GTCGGCTATGGGATGCCTGCACTCATTGTGGCTGTG...TCCAGTGAACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp CTCACTGTGGTCTTGGGGGATCCGCCTTCTGGTATAATGGTGTGGCTGGTGGTTAACTCTCTGTACTTTTaGCACTACAGCAATGTGTTC +
Preference number: 4 (lower is better)
Translates to: LTVVLGDPPSGIMVWLVVNSLYF*HYSNVF
Trigger: GAACACATTGCTGTAGTGGCAAAAGTACAGAGAGTT...AACCACCAGCCACACCATTATACCAGAAGGCGGATCCCCCAAGACCACAGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCGGATTGTTAGTACCATaGGGACGAAGCAGAGCATTG +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIIGLLVP*GRSRAL
Trigger: CAATGCTCTGCTTCGTCCGCATGGTACTAACAATCC...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504896.5
ENST00000507164.5
ENST00000508693.5
ENST00000514157.5
CDS-3UTR GCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCTCTGTAGGGCTCTTGTaGGTTGTACATGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIISVGLL*VVHADR
Trigger: TCTGTCAGCATGTACAACGCACAAGAGCCCTACAGA...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504896.5
ENST00000507164.5
ENST00000508693.5
ENST00000514157.5
CDS-3UTR GCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCATTCGCCGCTGGCAATaGTGTAACTATTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIIIRRWQ*CNYCHG
Trigger: ACCATGGCAATAGTTACAGCATTGCCAGCGGCGAAT...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCTGGAGATCTTCTGTGTaGTCGTTGGTTAGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIIWRSSV*SLVSKG
Trigger: CCCTTTGCTAACCAACGAGCACACAGAAGATCTCCA...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp CACTGCCAAGGTTATTCACCAGCTTGTTCATCAGATTCCTGTTCTGTTCACTGGCAGCCAGTGTCGGCATaGTGGTATAGAGAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: HCQGYSPACSSDSCSVHWQPVSA*WYRESL
Trigger: GAGACTCTCTCTATACCAGCATGCCGACACTGGCTG...CCAGTGAACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR GCA 90 bp AGAGGACAGCATAAAGATTTAGGAGTACACACATTATTACCACTGCTTATATCAACCGGCCGGCCCCTGTaGAGACACCCCCAACCACAC +
Preference number: 4 (lower is better)
Translates to: RGQHKDLGVHTLLPLLISTGRPL*RHPQPH
Trigger: GTGTGGTTGGGGGTGTCTGCACAGGGGCCGGCCGGT...TGATATAAGCAGTGGTAATAATGTGTGTACTCCTAAATCTTTATGCTGTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512091.6
CDS-3UTR CCA 90 bp TCTAGAATCATAGCTAGTGTCCTGGTGATGAACTGCTTGCCAAATATGCTTTGCGCGGACCACAGCCATTaGAATTGGGGCACGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SRIIASVLVMNCLPNMLCADHSH*NWGTAE
Trigger: TTCAGCCGTGCCCCAATTCCAATGGCTGTGGTCCGC...GCAAAGCATATTTGGCAAGCAGTTCATCACCAGGACACTAGCTATGATTCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512091.6
ENST00000514591.5
CDS-3UTR CCA 90 bp CTCTATGGGGTGACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAGATGACGTCTGTTCCTaGACAGCGAAGCTCTATAGG +
Preference number: 4 (lower is better)
Translates to: LYGVTGDLLCARWLAKGKDDVCS*TAKLYR
Trigger: CCTATAGAGCTTCGCTGTCCAGGAACAGACGTCATC...TTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGTCACCCCATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CTCTATGGGGTGACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAACACGCCCCAGATTGGTaGTCGGACTCAAACAAATGT +
Preference number: 4 (lower is better)
Translates to: LYGVTGDLLCARWLAKGKHAPDW*SDSNKC
Trigger: ACATTTGTTTGAGTCCGACCACCAATCTGGGGCGTG...TTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGTCACCCCATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTCACCACGCCCCAGATTaGTGGTCGGACTCAAACAAA +
Preference number: 4 (lower is better)
Translates to: TGDLLCARWLAKGKSSHCHHAPD*WSDSNK
Trigger: TTTGTTTGAGTCCGACCACCAATCTGGGGCGTGGTG...ACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTTCTGCTGATGGAAGGTGTGTaGTCATGTCATCAAGTACCT +
Preference number: 4 (lower is better)
Translates to: LVSKGKKLSLWSWGIRLLLMEGV*SCHQVP
Trigger: AGGTACTTGATGACATGACCACACACCTTCCATCAG...CAGAAGGCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CCTTCCACTGCCAAGGTTATTCACCAGCTTGTTCATCAGATTCCTGTTCTGTTCAGTTCCTGCAGGGCATaGCTGCTTTGCTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: PSTAKVIHQLVHQIPVLFSSCRA*LLCYLS
Trigger: GGACAGATAGCAAAGCAGCCATGCCCTGCAGGAACT...GAACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGTGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TCAACTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCAATTTCTGTAGGAGGCCTACCAGCTaGTCCATGGCCCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: STQNSQQGVSSFVGSNFCRRPTS*SMARTE
Trigger: CTCTGTCCGGGCCATGGACCAGCTGGTAGGCCTCCT...ACAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000502815.1
ENST00000504896.5
ENST00000506700.5
ENST00000506720.5
ENST00000506746.5
ENST00000507164.5
ENST00000507625.5
ENST00000508693.5
ENST00000508946.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
ENST00000514591.5
ENST00000514996.5
CDS-3UTR CCA 90 bp ACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTCAGTATGAAGCAACATaGTGGCCGCACGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: TGDLLCARWLAKGKSSHCQYEAT*WPHAAD
Trigger: ATCAGCTGCGTGCGGCCACCATGTTGCTTCATACTG...ACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CACTGCCAAGGTTATTCACCAGCTTGTTCATCAGATTCCTGTTCTGTTCACTGGCAGTATGAAGCAACATaGTGGCCGCACGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: HCQGYSPACSSDSCSVHWQYEAT*WPHAAD
Trigger: ATCAGCTGCGTGCGGCCACCATGTTGCTTCATACTG...CCAGTGAACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCTGGATAGTGCTTCCATaGCCCATGTTTTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRWIVLP*PMFSGN
Trigger: ATTTCCAGAAAACATGGGCCATGGAAGCACTATCCA...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp GGTATAATGGTGTGGCTGGTGGTTCTCGGTGGAGTATACTCTTGGGGGCAGCAATACTGGCATTCTCCGTaGATAAATAAGGACCCAAGT +
Preference number: 4 (lower is better)
Translates to: GIMVWLVVLGGVYSWGQQYWHSP*INKDPS
Trigger: ACTTGGGTCCTTATTTATCCACGGAGAATGCCAGTA...TTGCTGCCCCCAAGAGTATACTCCACCGAGAACCACCAGCCACACCATTATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp TGCTCGTTGGTTAGCAAAGGGAAAAAGCTCTCACTGTGGTCTTGGGGGATCCGCCTGTCATTGTACGCTTaGAGTAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: CSLVSKGKKLSLWSWGIRLSLYA*SSSKMN
Trigger: GTTCATTTTGGAGCTACTCCAAGCGTACAATGACAG...GCGGATCCCCCAAGACCACAGTGAGAGCTTTTTCCCTTTGCTAACCAACGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ACTCTCTGTGGCGGCCACACCAGCCAGTGTCGGCATGCTGGTATAGAGAGAGTCGCAAAATTTGTTAGGTaGTTACAAGAGCATGTAGTA +
Preference number: 4 (lower is better)
Translates to: TLCGGHTSQCRHAGIERVAKFVR*LQEHVV
Trigger: TACTACATGCTCTTGTAACCACCTAACAAATTTTGC...GACTCTCTCTATACCAGCATGCCGACACTGGCTGGTGTGGCCGCCACAGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CTCTATGGGGTGACTGGAGATCTTCTGTGTGCTCGTTGGTTAGCAAAGGGAAAATCCAGAAGGAGGTCATaGACCGCATCACTGTGCTTA +
Preference number: 4 (lower is better)
Translates to: LYGVTGDLLCARWLAKGKSRRRS*TASLCL
Trigger: TAAGCACAGTGATGCGGTCCATGACCTCCTTCTGGA...TTTTCCCTTTGCTAACCAACGAGCACACAGAAGATCTCCAGTCACCCCATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ATGAATGAGTTCCAGGCCCAAACTCTCCTCGTGGTTAAACGAGGTGGCATCATCATGCAGAGGTTCTTGTaGATGGTGTTACGGTCACTC +
Preference number: 4 (lower is better)
Translates to: MNEFQAQTLLVVKRGGIIMQRFL*MVLRSL
Trigger: GAGTGACCGTAACACCATCCACAAGAACCTCTGCAT...GATGATGCCACCTCGTTTAACCACGAGGAGAGTTTGGGCCTGGAACTCATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CCTTCCACTGCCAAGGTTATTCACCAGCTTGTTCATCAGATTCCTGTTCTGTTCGGTGGAGTATACTCTTaGGGGCAGCAAAGGAGCATC +
Preference number: 4 (lower is better)
Translates to: PSTAKVIHQLVHQIPVLFGGVYS*GQQRSI
Trigger: GATGCTCCTTTGCTGCCCCCAAGAGTATACTCCACC...GAACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGTGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp ACTGCCAAGGTTATTCACCAGCTTGTTCATCAGATTCCTGTTCTGTTCACTGGAGCTGGTGGTTCTCGGTaGAGTATACTCTTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: TAKVIHQLVHQIPVLFTGAGGSR*SILLGA
Trigger: TGCCCCCAAGAGTATACTCCACCGAGAACCACCAGC...TCCAGTGAACAGAACAGGAATCTGATGAACAAGCTGGTGAATAACCTTGGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000504896.5
ENST00000506700.5
ENST00000507164.5
ENST00000508693.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
CDS-3UTR CCA 90 bp CTGCTTATATCAACTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCGGTGGGGGTTCGGTCTaGGTGCTGGTGGTAACACTC +
Preference number: 4 (lower is better)
Translates to: LLISTQNSQQGVSSFVGSGGGSV*VLVVTL
Trigger: GAGTGTTACCACCAGCACCCAGACCGAACCCCCACC...GGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAGTTGATATAAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000502815.1
ENST00000504896.5
ENST00000506700.5
ENST00000506720.5
ENST00000506746.5
ENST00000507164.5
ENST00000507625.5
ENST00000508693.5
ENST00000508946.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
ENST00000514591.5
ENST00000514996.5
CDS-3UTR CCA 90 bp CTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCAATTTCTGTGTCAGGTGGGGGTTCGGTCTaGGTGCTGGTGGTAACACTC +
Preference number: 4 (lower is better)
Translates to: LRTVNKVLAVLLVPISVSGGGSV*VLVVTL
Trigger: GAGTGTTACCACCAGCACCCAGACCGAACCCCCACC...TGACACAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000502815.1
ENST00000504896.5
ENST00000506700.5
ENST00000506720.5
ENST00000506746.5
ENST00000507164.5
ENST00000507625.5
ENST00000508693.5
ENST00000508946.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
ENST00000514591.5
ENST00000514996.5
CDS-3UTR CCA 90 bp CTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCAATTTCTGTGTCAACCACATTTGGCCGGTaGGGGTTCGGTCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LRTVNKVLAVLLVPISVSTTFGR*GFGLGA
Trigger: AGCACCCAGACCGAACCCCCACCGGCCAAATGTGGT...TGACACAGAAATTGGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000502815.1
ENST00000504896.5
ENST00000506700.5
ENST00000506720.5
ENST00000506746.5
ENST00000507164.5
ENST00000507625.5
ENST00000508693.5
ENST00000508946.5
ENST00000509896.5
ENST00000511324.5
ENST00000512091.6
ENST00000514157.5
ENST00000514591.5
ENST00000514996.5
CDS-3UTR CCA 90 bp CTGCTTATATCAACTCAGAACAGTCAACAAGGTGTTAGCAGTTTTGTTGGTTCCACCACATTTGGCCGGTaGGGGTTCGGTCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLISTQNSQQGVSSFVGSTTFGR*GFGLGA
Trigger: AGCACCCAGACCGAACCCCCACCGGCCAAATGTGGT...GGAACCAACAAAACTGCTAACACCTTGTTGACTGTTCTGAGTTGATATAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000502815.1
ENST00000504896.5
ENST0000