RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000072071

Ensembl transcript IDs: ENST00000340736.10, ENST00000361434.7, ENST00000588677.1, ENST00000589616.1, ENST00000590223.1, ENST00000591528.1, ENST00000592164.1, ENST00000593005.5, ENST00000672030.1, ENST00000672190.1, ENST00000672291.1, ENST00000672654.1, ENST00000673088.1, ENST00000673195.1, ENST00000673419.1, ENST00000673576.1

Found 1062 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTaGTCCGGAGAAAGCCCGGGCTGGCCCGGGCCGCAGGCTCCCGGT +
Preference number: 1 (lower is better)
Translates to: HVHGEVLAARPAALL*SGESPGWPGPQAPG
Trigger: ACCGGGAGCCTGCGGCCCGGGCCAGCCCGGGCTTTCTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR GCA 90 bp GGATGCACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTaGTCTGCTCCGGAGAAAGCCCGGGCTGGCCCGGGCCGCAGGCTC +
Preference number: 1 (lower is better)
Translates to: GCTYTEKSWLPGQQR*SAPEKARAGPGRRL
Trigger: GAGCCTGCGGCCCGGGCCAGCCCGGGCTTTCTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGTGCATCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR CCA 90 bp GGAACTCTCCTGGCCCTCCTCCTGGTGTCGGGGGCAGCCACAGGCTaGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCTGCTCATGCCT +
Preference number: 1 (lower is better)
Translates to: GTLLALLLVSGAATG*AASRDRPAPRLLMP
Trigger: AGGCATGAGCAGGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACACCAGGAGGAGGGCCAGGAGAGTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR CCA 90 bp TGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTaGGGTCAAGCCGCCCAGAACATGGGTGTCCCGACCCCAGCCCTG +
Preference number: 1 (lower is better)
Translates to: CSGHIPSLELPGSGI*GQAAQNMGVPTPAL
Trigger: CAGGGCTGGGGTCGGGACACCCATGTTCTGGGCGGCTTGACCCCAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR CCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTaGGATTTGGGGTCAAGCCGCCCAGAACATGGGTGTCCCGACCCC +
Preference number: 1 (lower is better)
Translates to: GQVLRTHPEPGASGV*DLGSSRPEHGCPDP
Trigger: GGGGTCGGGACACCCATGTTCTGGGCGGCTTGACCCCAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR CCA 90 bp TCAAGCCGCCCAGAACATGGGTGTCCCGACCCCAGCCCTGGCACCTaGCTTCGTCTTCCCTGCGGGAAGGTGGAGGATAGGGAAGGTGAT +
Preference number: 1 (lower is better)
Translates to: SSRPEHGCPDPSPGT*LRLPCGKVEDREGD
Trigger: ATCACCTTCCCTATCCTCCACCTTCCCGCAGGGAAGACGAAGCCAGGTGCCAGGGCTGGGGTCGGGACACCCATGTTCTGGGCGGCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR GCA 90 bp CAGGAGGAACCTGTCCATCTGTCCTGCCTCACTGCTCCCTCTGGGTaGAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGG +
Preference number: 1 (lower is better)
Translates to: QEEPVHLSCLTAPSG*SRQHFWLRRGAANR
Trigger: CCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAGATGGACAGGTTCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR GCA 90 bp GGGAATTACAGCGCAGGAGGAACCTGTCCATCTGTCCTGCCTCACTaGTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGG +
Preference number: 1 (lower is better)
Translates to: GNYSAGGTCPSVLPH*SLWVQPAAFLAAER
Trigger: CCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAGATGGACAGGTTCCTCCTGCGCTGTAATTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR CCA 90 bp CTGCCACACAGCTCTGAGGCCTGGAAGCCACCCGGCGATGCCGGCTaGAACAGGACCCGATACACCCTCTCTCCCTTTGATTGTCCGAGT +
Preference number: 1 (lower is better)
Translates to: LPHSSEAWKPPGDAG*NRTRYTLSPFDCPS
Trigger: ACTCGGACAATCAAAGGGAGAGAGGGTGTATCGGGTCCTGTTCCAGCCGGCATCGCCGGGTGGCTTCCAGGCCTCAGAGCTGTGTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR CCA 90 bp CTCCTCCTCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTaGTGGGAAACCCTGTCTGTGAACCCTGGCACCTCAGGCCCCCAG +
Preference number: 1 (lower is better)
Translates to: LLLTTLPPNRAGACG*WETLSVNPGTSGPQ
Trigger: CTGGGGGCCTGAGGTGCCAGGGTTCACAGACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGAGGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR TCA 90 bp CGGCGATGCCGGCTGGAACAGGACCCGATACACCCTCTCTCCCTTTaGTTGTCCGAGTCTGGAGAGATACAAGGAAGGCTGGGCAGGGAG +
Preference number: 1 (lower is better)
Translates to: RRCRLEQDPIHPLSL*LSESGEIQGRLGRE
Trigger: CTCCCTGCCCAGCCTTCCTTGTATCTCTCCAGACTCGGACAATCAAAGGGAGAGAGGGTGTATCGGGTCCTGTTCCAGCCGGCATCGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR CCA 90 bp CTCCTCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTaGGAAACCCTGTCTGTGAACCCTGGCACCTCAGGCCCCCAGGTT +
Preference number: 1 (lower is better)
Translates to: LLTTLPPNRAGACGW*ETLSVNPGTSGPQV
Trigger: AACCTGGGGGCCTGAGGTGCCAGGGTTCACAGACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR CCA 90 bp TCCACACAACAGAGCTCCCAGCCTAGTGCAGTCCGGGAAGGGCCATaGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGACTGTC +
Preference number: 1 (lower is better)
Translates to: STQQSSQPSAVREGP*NCPLPSSESSGKTV
Trigger: GACAGTCTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGACTGCACTAGGCTGGGAGCTCTGTTGTGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR CCA 90 bp CTCTCTCCCTTTGATTGTCCGAGTCTGGAGAGATACAAGGAAGGCTaGGCAGGGAGGAAGTTGGCCTCTCTGTGTGCCTCAGCCCCCTGG +
Preference number: 1 (lower is better)
Translates to: LSPFDCPSLERYKEG*AGRKLASLCASAPW
Trigger: CCAGGGGGCTGAGGCACACAGAGAGGCCAACTTCCTCCCTGCCCAGCCTTCCTTGTATCTCTCCAGACTCGGACAATCAAAGGGAGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR TCA 90 bp GCAATATACAAGAAGCAGGAACTCAAAGGGACAGCGCAGCCATCTTaGCAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCCGGTG +
Preference number: 1 (lower is better)
Translates to: AIYKKQELKGTAQPS*QSIFGCEEVSPGPV
Trigger: CACCGGCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCCCTTTGAGTTCCTGCTTCTTGTATATTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR CCA 90 bp GATGCCGGGCAGGCGGAGCAGGAAAGGAGGGTGCCAGGAAGGAAATaGGTTCTTTGTTTCGCTGTTGCATCTAGATTTTGTTTTCTGTCT +
Preference number: 1 (lower is better)
Translates to: DAGQAEQERRVPGRK*VLCFAVASRFCFLS
Trigger: AGACAGAAAACAAAATCTAGATGCAACAGCGAAACAAAGAACCCATTTCCTTCCTGGCACCCTCCTTTCCTGCTCCGCCTGCCCGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR GCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCCAGAGGGGGCAGGTTTaGTTGCGGGGCAGGGACCAA +
Preference number: 2 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLAQRGQV*LRGRDQ
Trigger: TTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTG...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR TCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCCAGGTTAGAGTCCCCTaGGGGGACTGTAGGGCCCAT +
Preference number: 2 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLAQVRVP*GDCRAH
Trigger: ATGGGCCCTACAGTCCCCTCAGGGGACTCTAACCTG...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR GCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCACTGCTCCCTCTGGGTaGAGCCGGCAGCATTTCTGG +
Preference number: 2 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLATAPSG*SRQHFW
Trigger: CCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGT...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR GCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCCCTCAGCCATACCCATaGCCTCCACAACCCCAGTGC +
Preference number: 2 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLAPQPYP*PPQPQC
Trigger: GCACTGGGGTTGTGGAGGGCATGGGTATGGCTGAGG...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR CCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCGGAACTGCCCAAATATaGCCACCCCTGTGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLAGTAQI*PPLWAG
Trigger: CCCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCC...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR CCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCCTCCTCAGAGTCGTCTaGCAAGACTGTCCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLALLRVV*QDCPWP
Trigger: AGGCCAGGGACAGTCTTGCCAGACGACTCTGAGGAG...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR GCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGCCAGTCCCCCTGCCCTaGGGCCTTTTCCCAGTCTCC +
Preference number: 2 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPEPVPLP*GLFPVS
Trigger: GGAGACTGGGAAAAGGCCGCAGGGCAGGGGGACTGG...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR GCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGACCGCCCAGTCCCCCTaGCCTGCGGCCTTTTCCCAG +
Preference number: 2 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGTAQSP*PAAFSQ
Trigger: CTGGGAAAAGGCCGCAGGGCAGGGGGACTGGGCGGT...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR GCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGACCGCCCAGTCCCCCTaGCCTGCGGCCTTTTCCCAG +
Preference number: 2 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWTAQSP*PAAFSQ
Trigger: CTGGGAAAAGGCCGCAGGGCAGGGGGACTGGGCGGT...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR GCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCCATGGAACTGTCCCTTaGCCTCCTCAGAGTCGTCTG +
Preference number: 2 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLAHGTVP*PPQSRL
Trigger: CAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATG...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGTGGCTGAGGGGCACCTaGAGAGAGTGGCCCACCAGC +
Preference number: 2 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGWLRGT*REWPTS
Trigger: GCTGGTGGGCCACTCTCTCCAGGTGCCCCTCAGCCA...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCGGGAGAGTCTGGAAGTaGGCTGCACCCTTCCAAGTT +
Preference number: 2 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLAGRVWK*AAPFQV
Trigger: AACTTGGAAGGGTGCAGCCCACTTCCAGACTCTCCC...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR GCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGGGGGGCCGGGACAGGTaGTCAGGACACATCCCGAGC +
Preference number: 2 (lower is better)
Translates to: VREGPWNCPLPSSESSGKGGRDR*SGHIPS
Trigger: GCTCGGGATGTGTCCTGAGCACCTGTCCCGGCCCCC...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGGGCACCTGGAGAGAGTaGCCCACCAGCCACTGCCTC +
Preference number: 2 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWGTWRE*PTSHCL
Trigger: GAGGCAGTGGCTGGTGGGCCACTCTCTCCAGGTGCC...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGGGTCATTGGGTGCACTaGGAGGCAGAGGGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPEGHWVH*EAEGAG
Trigger: ACCTGCCCCCTCTGCCTCCCAGTGCACCCAATGACC...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR CCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGCCCAGCCCTGGCACCTaGCTTCGTCTTCCCTGCGGG +
Preference number: 2 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLPSPGT*LRLPCG
Trigger: CCCGCAGGGAAGACGAAGCCAGGTGCCAGGGCTGGG...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR TCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCCAGGTTAGAGTCCCCTaGGGGGACTGTAGGGCCCAT +
Preference number: 2 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSQVRVP*GDCRAH
Trigger: ATGGGCCCTACAGTCCCCTCAGGGGACTCTAACCTG...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR TCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGGGAAACCCTGTCTGTaGACCCTGGCACCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: PLPCGLFPVSREQGITAQGKPCL*TLAPQA
Trigger: GGCCTGAGGTGCCAGGGTTCACAGACAGGGTTTCCC...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR GCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGGGGGGCAGGTTTGCTTaGGGGGCAGGGACCAAGAGC +
Preference number: 2 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLGGRFA*GAGTKS
Trigger: GCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCC...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR GCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGCAGAGGGGGCAGGTTTaGTTGCGGGGCAGGGACCAA +
Preference number: 2 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWQRGQV*LRGRDQ
Trigger: TTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTG...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR GCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGCCAGGCCAGCAGCGCTaGTCTGCTCCGGAGAAAGCC +
Preference number: 2 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLPGQQR*SAPEKA
Trigger: GGCTTTCTCCGGAGCAGAGCAGCGCTGCTGGCCTGG...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR CCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGGGTCATTGGGTGCACTaGGAGGCAGAGGGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLGHWVH*EAEGAG
Trigger: ACCTGCCCCCTCTGCCTCCCAGTGCACCCAATGACC...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR CCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGGACACATCCCGAGCCTaGAGCTTCCGGGGTCTGGGA +
Preference number: 2 (lower is better)
Translates to: VREGPWNCPLPSSESSGKDTSRA*SFRGLG
Trigger: TCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTC...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR GCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCGGGGGCAGGTTTGCTTaGGGGGCAGGGACCAAGAGC +
Preference number: 2 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGGGRFA*GAGTKS
Trigger: GCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCC...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR CCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCGGCACCTGGAGAGAGTaGCCCACCAGCCACTGCCTC +
Preference number: 2 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGGTWRE*PTSHCL
Trigger: GAGGCAGTGGCTGGTGGGCCACTCTCTCCAGGTGCC...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR CCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCGGCACCTGGAGAGAGTaGCCCACCAGCCACTGCCTC +
Preference number: 2 (lower is better)
Translates to: GLFPVSREQGITAQEEPVGTWRE*PTSHCL
Trigger: GAGGCAGTGGCTGGTGGGCCACTCTCTCCAGGTGCC...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCTCCAGTGGGGGCCTTTaGCAACCTCAGAAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSSSGGL*QPQKLP
Trigger: GGGCAGCTTCTGAGGTTGCCAAAGGCCCCCACTGGA...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGACAGGTTCCATCCAGTaGGGGCCTTTGGCAACCTCA +
Preference number: 2 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGTGSIQ*GPLATS
Trigger: TGAGGTTGCCAAAGGCCCCCACTGGATGGAACCTGT...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR CAA 90 bp AGCAGGAACTCAAAGGGACAGCGCAGCCATCTTGACAAAGCATCTTaGGGTGTGAAGAGGTCTCCCCCGGGCCGGTGGGGAGGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: SRNSKGQRSHLDKAS*GVKRSPPGRWGGKG
Trigger: CCCCTTCCCTCCCCACCGGCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCCCTTTGAGTTCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR GCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGAGTCTGGAAGTGGGCTaGACCCTTCCAAGTTCTCCC +
Preference number: 2 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGSLEVG*TLPSSP
Trigger: GGGAGAACTTGGAAGGGTGCAGCCCACTTCCAGACT...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR GCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGAGTCTGGAAGTGGGCTaGACCCTTCCAAGTTCTCCC +
Preference number: 2 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWSLEVG*TLPSSP
Trigger: GGGAGAACTTGGAAGGGTGCAGCCCACTTCCAGACT...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR GCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCTCTGTCCTGCCTCACTaGTCCCTCTGGGTGCAGCCG +
Preference number: 2 (lower is better)
Translates to: GLFPVSREQGITAQEEPVSVLPH*SLWVQP
Trigger: CGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAGA...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCCTGTCTGTGAACCCTaGCACCTCAGGCCCCCAGGT +
Preference number: 2 (lower is better)
Translates to: GLFPVSREQGITAQEEPVPVCEP*HLRPPG
Trigger: ACCTGGGGGCCTGAGGTGCCAGGGTTCACAGACAGG...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCCCTGTCTGTGAACCCTaGCACCTCAGGCCCCCAGGT +
Preference number: 2 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSPVCEP*HLRPPG
Trigger: ACCTGGGGGCCTGAGGTGCCAGGGTTCACAGACAGG...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCGGTGCGTGTGGCTGGTaGGAAACCCTGTCTGTGAAC +
Preference number: 2 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSGACGW*ETLSVN
Trigger: GTTCACAGACAGGGTTTCCCACCAGCCACACGCACC...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGGGAGAGTCTGGAAGTaGGCTGCACCCTTCCAAGTT +
Preference number: 2 (lower is better)
Translates to: PLPCGLFPVSREQGITAQGRVWK*AAPFQV
Trigger: AACTTGGAAGGGTGCAGCCCACTTCCAGACTCTCCC...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGACAGGTTCCATCCAGTaGGGGCCTTTGGCAACCTCA +
Preference number: 2 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGTGSIQ*GPLATS
Trigger: TGAGGTTGCCAAAGGCCCCCACTGGATGGAACCTGT...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGACCTCACTGCTCCCTCTaGGTGCAGCCGGCAGCATTT +
Preference number: 2 (lower is better)
Translates to: VVLHQESPQGRGSLGALGPHCSL*VQPAAF
Trigger: AAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR CAA 90 bp CCGGCGATGCCGGCTGGAACAGGACCCGATACACCCTCTCTCCCTTaGATTGTCCGAGTCTGGAGAGATACAAGGAAGGCTGGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: PAMPAGTGPDTPSLP*IVRVWRDTRKAGQG
Trigger: TCCCTGCCCAGCCTTCCTTGTATCTCTCCAGACTCGGACAATCAAAGGGAGAGAGGGTGTATCGGGTCCTGTTCCAGCCGGCATCGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR TCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCCAGGTTAGAGTCCCCTaGGGGGACTGTAGGGCCCAT +
Preference number: 2 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGQVRVP*GDCRAH
Trigger: ATGGGCCCTACAGTCCCCTCAGGGGACTCTAACCTG...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR GCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGAGTCTGGAAGTGGGCTaGACCCTTCCAAGTTCTCCC +
Preference number: 2 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLSLEVG*TLPSSP
Trigger: GGGAGAACTTGGAAGGGTGCAGCCCACTTCCAGACT...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR GCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCTGGATTGTAAAAAGCTaGTCTGGCGGCCCGCCCGCC +
Preference number: 2 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGWIVKS*SGGPPA
Trigger: GGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCA...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR CCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGGTGCGTGTGGCTGGTaGGAAACCCTGTCTGTGAAC +
Preference number: 2 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWGACGW*ETLSVN
Trigger: GTTCACAGACAGGGTTTCCCACCAGCCACACGCACC...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCGCTGGTGCGTGTGGCTaGTGGGAAACCCTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: GLFPVSREQGITAQEEPVAGACG*WETLSV
Trigger: CACAGACAGGGTTTCCCACCAGCCACACGCACCAGC...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCTCCAGTGGGGGCCTTTaGCAACCTCAGAAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGSSGGL*QPQKLP
Trigger: GGGCAGCTTCTGAGGTTGCCAAAGGCCCCCACTGGA...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR CCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGACAGGTTCCATCCAGTaGGGGCCTTTGGCAACCTCA +
Preference number: 2 (lower is better)
Translates to: VREGPWNCPLPSSESSGKTGSIQ*GPLATS
Trigger: TGAGGTTGCCAAAGGCCCCCACTGGATGGAACCTGT...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR CCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGGCCGCAGGCTCCCGGTaGCTTCAAGTGATGAGATTT +
Preference number: 2 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLAAGSR*LQVMRF
Trigger: AAATCTCATCACTTGAAGCCACCGGGAGCCTGCGGC...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR GCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGGGGGCAGGTTTGCTTaGGGGGCAGGGACCAAGAGC +
Preference number: 2 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMGGRFA*GAGTKS
Trigger: GCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCC...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAGGCACCTGGAGAGAGTaGCCCACCAGCCACTGCCTC +
Preference number: 2 (lower is better)
Translates to: QETKALISLHRVEGWERGGTWRE*PTSHCL
Trigger: GAGGCAGTGGCTGGTGGGCCACTCTCTCCAGGTGCC...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR TCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGACAGCGCAGCCATCTTaGCAAAGCATCTTTGGGTGT +
Preference number: 2 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLTAQPS*QSIFGC
Trigger: ACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGT...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR TCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGAACTCATGGCACTTGTaGGAAAAGGAGGGGCAGAGA +
Preference number: 2 (lower is better)
Translates to: VREGPWNCPLPSSESSGKNSWHL*EKEGQR
Trigger: TCTCTGCCCCTCCTTTTCTCACAAGTGCCATGAGTT...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR GCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGCCCTGCGGGGAGTTGTaGTTCATCAGGAGTCGCCCC +
Preference number: 2 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMPCGEL*FIRSRP
Trigger: GGGGCGACTCCTGATGAAGCACAACTCCCCGCAGGG...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGCCTGTCTGTGAACCCTaGCACCTCAGGCCCCCAGGT +
Preference number: 2 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMPVCEP*HLRPPG
Trigger: ACCTGGGGGCCTGAGGTGCCAGGGTTCACAGACAGG...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGACCTGTCTGTGAACCCTaGCACCTCAGGCCCCCAGGT +
Preference number: 2 (lower is better)
Translates to: QETKALISLHRVEGWERGPVCEP*HLRPPG
Trigger: ACCTGGGGGCCTGAGGTGCCAGGGTTCACAGACAGG...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGGTCATTGGGTGCACTaGGAGGCAGAGGGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMGHWVH*EAEGAG
Trigger: ACCTGCCCCCTCTGCCTCCCAGTGCACCCAATGACC...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR GCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGCACAGGACTGGGAACTaGCCAAATATGGCCACCCCT +
Preference number: 2 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPHRTGN*PNMATP
Trigger: AGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTG...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCTGGTGCGTGTGGCTaGTGGGAAACCCTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMAGACG*WETLSV
Trigger: CACAGACAGGGTTTCCCACCAGCCACACGCACCAGC...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGGAGAGTCTGGAAGTaGGCTGCACCCTTCCAAGTT +
Preference number: 2 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPGRVWK*AAPFQV
Trigger: AACTTGGAAGGGTGCAGCCCACTTCCAGACTCTCCC...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGCCTCACTGCTCCCTCTaGGTGCAGCCGGCAGCATTT +
Preference number: 2 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMPHCSL*VQPAAF
Trigger: AAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGAAGGGAGGGGGTCATTaGGTGCACTGGGAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMKGGGH*VHWEAE
Trigger: CTCTGCCTCCCAGTGCACCCAATGACCCCCTCCCTT...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR TCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGCAGGTTAGAGTCCCCTaGGGGGACTGTAGGGCCCAT +
Preference number: 2 (lower is better)
Translates to: ERSFRESSTFKPPATTAQQVRVP*GDCRAH
Trigger: ATGGGCCCTACAGTCCCCTCAGGGGACTCTAACCTG...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR GCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCTCTGTCCTGCCTCACTaGTCCCTCTGGGTGCAGCCG +
Preference number: 2 (lower is better)
Translates to: QGERSFRESSTFKPPATTSVLPH*SLWVQP
Trigger: CGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAGA...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGGCTGGTGCGTGTGGCTaGTGGGAAACCCTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: ERSFRESSTFKPPATTAQAGACG*WETLSV
Trigger: CACAGACAGGGTTTCCCACCAGCCACACGCACCAGC...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGCCTCACTGCTCCCTCTaGGTGCAGCCGGCAGCATTT +
Preference number: 2 (lower is better)
Translates to: ERSFRESSTFKPPATTAQPHCSL*VQPAAF
Trigger: AAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCTGGTGCGTGTGGCTaGTGGGAAACCCTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: QGERSFRESSTFKPPATTAGACG*WETLSV
Trigger: CACAGACAGGGTTTCCCACCAGCCACACGCACCAGC...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGTCCAGTGGGGGCCTTTaGCAACCTCAGAAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPSSGGL*QPQKLP
Trigger: GGGCAGCTTCTGAGGTTGCCAAAGGCCCCCACTGGA...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGACAGGTTCCATCCAGTaGGGGCCTTTGGCAACCTCA +
Preference number: 2 (lower is better)
Translates to: ERSFRESSTFKPPATTAQTGSIQ*GPLATS
Trigger: TGAGGTTGCCAAAGGCCCCCACTGGATGGAACCTGT...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR TCA 90 bp GTCTTCTGGTGTAATGGGTTAGGCCTTTCTACCAGAAAAAGCCAGAGTTGGAACAAGCATCTTTGGGTGTaGAGAGGTCTCCCCCGGGCC +
Preference number: 2 (lower is better)
Translates to: VFWCNGLGLSTRKSQSWNKHLWV*RGLPRA
Trigger: GGCCCGGGGGAGACCTCTTCACACCCAAAGATGCTT...GTTCCAACTCTGGCTTTTTCTGGTAGAAAGGCCTAACCCATTACACCAGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR GCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCAGTCTGGAAGTGGGCTaGACCCTTCCAAGTTCTCCC +
Preference number: 2 (lower is better)
Translates to: QGERSFRESSTFKPPATTSLEVG*TLPSSP
Trigger: GGGAGAACTTGGAAGGGTGCAGCCCACTTCCAGACT...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGGGAGAGTCTGGAAGTaGGCTGCACCCTTCCAAGTT +
Preference number: 2 (lower is better)
Translates to: QGERSFRESSTFKPPATTGRVWK*AAPFQV
Trigger: AACTTGGAAGGGTGCAGCCCACTTCCAGACTCTCCC...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CCA 90 bp GTCTTCTGGTGTAATGGGTTAGGCCTTTCTACCAGAAAAAGCCAGAGTTGGAACAGCCGGCAGCATTTCTaGCTGCGGAGAGGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: VFWCNGLGLSTRKSQSWNSRQHF*LRRGAA
Trigger: AGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCT...GTTCCAACTCTGGCTTTTTCTGGTAGAAAGGCCTAACCCATTACACCAGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR TCA 90 bp GTCTTCTGGTGTAATGGGTTAGGCCTTTCTACCAGAAAAAGCCAGAGTTGGAACACAGCGCAGCCATCTTaGCAAAGCATCTTTGGGTGT +
Preference number: 2 (lower is better)
Translates to: VFWCNGLGLSTRKSQSWNTAQPS*QSIFGC
Trigger: ACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGT...GTTCCAACTCTGGCTTTTTCTGGTAGAAAGGCCTAACCCATTACACCAGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR GCA 72 bp TACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTaGTCTGCTCCGGAGAAAGCCCGGGCTGGCCCGGGC +
Preference number: 3 (lower is better)
Translates to: YTEKSWLPGQQR*SAPEKARAGPG
Trigger: GCCCGGGCCAGCCCGGGCTTTCTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR GCA 72 bp GGGACTGGGGATGCACGTACACGGAGAAGTCCTGGCTaGCAGGCCAGCAGCGCTGCTCTGCTCCGGAGAAAG +
Preference number: 3 (lower is better)
Translates to: GTGDARTRRSPG*QASSAALLRRK
Trigger: CTTTCTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGTGCATCCCCAGTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR CCA 72 bp CCAGAACATGGGTGTCCCGACCCCAGCCCTGGCACCTaGCTTCGTCTTCCCTGCGGGAAGGTGGAGGATAGG +
Preference number: 3 (lower is better)
Translates to: PEHGCPDPSPGT*LRLPCGKVEDR
Trigger: CCTATCCTCCACCTTCCCGCAGGGAAGACGAAGCCAGGTGCCAGGGCTGGGGTCGGGACACCCATGTTCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR CAA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGCAAGGGAGGGGGTCATaGGGTGCACTGGGAGGCAGA +
Preference number: 3 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWQGRGS*GALGGR
Trigger: TCTGCCTCCCAGTGCACCCAATGACCCCCTCCCTTG...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CAA 90 bp GATGCACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCAAGGGAGGGGGTCATaGGGTGCACTGGGAGGCAGA +
Preference number: 3 (lower is better)
Translates to: DARTRRSPGCQASSAALLQGRGS*GALGGR
Trigger: TCTGCCTCCCAGTGCACCCAATGACCCCCTCCCTTG...GAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGTGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR CCA 72 bp CAGAGCTCCCAGCCTAGTGCAGTCCGGGAAGGGCCATaGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGC +
Preference number: 3 (lower is better)
Translates to: QSSQPSAVREGP*NCPLPSSESSG
Trigger: GCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGACTGCACTAGGCTGGGAGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR CCA 72 bp CTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTaGGATTTGGGGTCAAGCCGCCCAGAACATGGGTGT +
Preference number: 3 (lower is better)
Translates to: LRTHPEPGASGV*DLGSSRPEHGC
Trigger: ACACCCATGTTCTGGGCGGCTTGACCCCAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR CCA 72 bp AGCTCTGAGGCCTGGAAGCCACCCGGCGATGCCGGCTaGAACAGGACCCGATACACCCTCTCTCCCTTTGAT +
Preference number: 3 (lower is better)
Translates to: SSEAWKPPGDAG*NRTRYTLSPFD
Trigger: ATCAAAGGGAGAGAGGGTGTATCGGGTCCTGTTCCAGCCGGCATCGCCGGGTGGCTTCCAGGCCTCAGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR GCA 72 bp GGAATTACAGCGCAGGAGGAACCTGTCCATCTGTCCTaGCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCAT +
Preference number: 3 (lower is better)
Translates to: GITAQEEPVHLS*LTAPSGCSRQH
Trigger: ATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAGATGGACAGGTTCCTCCTGCGCTGTAATTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR GCA 72 bp CTAGTGCAGTCCGGGAAGGGCCATGGAACTGTCCCTTaGCCTCCTCAGAGTCGTCTGGCAAGACTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: LVQSGKGHGTVP*PPQSRLARLSL
Trigger: CAGGGACAGTCTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGACTGCACTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR CCA 72 bp AGAGGAAACCAAGACCCTTCTCTGTACCGTCCCAGCTaGGGTGGGGGCGTCAAGGCACCAGGTCTGGTTAGG +
Preference number: 3 (lower is better)
Translates to: RGNQDPSLYRPS*GGGVKAPGLVR
Trigger: CCTAACCAGACCTGGTGCCTTGACGCCCCCACCCCAGCTGGGACGGTACAGAGAAGGGTCTTGGTTTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR-3UTR CAA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCATCCAGTGGGGGCCTTaGGCAACCTCAGAAGCTGCC +
Preference number: 3 (lower is better)
Translates to: GLFPVSREQGITAQEEPVIQWGP*ATSEAA
Trigger: GGCAGCTTCTGAGGTTGCCAAAGGCCCCCACTGGAT...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR CCA 72 bp ACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTaGGAAACCCTGTCTGTGAACCCTGGCACCTCAGGC +
Preference number: 3 (lower is better)
Translates to: TLPPNRAGACGW*ETLSVNPGTSG
Trigger: GCCTGAGGTGCCAGGGTTCACAGACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CAA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGCAAGGGAGGGGGTCATaGGGTGCACTGGGAGGCAGA +
Preference number: 3 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMQGRGS*GALGGR
Trigger: TCTGCCTCCCAGTGCACCCAATGACCCCCTCCCTTG...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CAA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCATCCAGTGGGGGCCTTaGGCAACCTCAGAAGCTGCC +
Preference number: 3 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPIQWGP*ATSEAA
Trigger: GGCAGCTTCTGAGGTTGCCAAAGGCCCCCACTGGAT...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
3UTR-3UTR CAA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGGAGACCCGAAGATGTTaGAAAACTCATGGCACTTGT +
Preference number: 3 (lower is better)
Translates to: VREGPWNCPLPSSESSGKETRRC*KTHGTC
Trigger: ACAAGTGCCATGAGTTTTCAAACATCTTCGGGTCTC...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR TCA 72 bp CGGCTGGAACAGGACCCGATACACCCTCTCTCCCTTTaGTTGTCCGAGTCTGGAGAGATACAAGGAAGGCTG +
Preference number: 3 (lower is better)
Translates to: RLEQDPIHPLSL*LSESGEIQGRL
Trigger: CAGCCTTCCTTGTATCTCTCCAGACTCGGACAATCAAAGGGAGAGAGGGTGTATCGGGTCCTGTTCCAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR CCA 72 bp TTTGATTGTCCGAGTCTGGAGAGATACAAGGAAGGCTaGGCAGGGAGGAAGTTGGCCTCTCTGTGTGCCTCA +
Preference number: 3 (lower is better)
Translates to: FDCPSLERYKEG*AGRKLASLCAS
Trigger: TGAGGCACACAGAGAGGCCAACTTCCTCCCTGCCCAGCCTTCCTTGTATCTCTCCAGACTCGGACAATCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR TCA 72 bp AAGAAGCAGGAACTCAAAGGGACAGCGCAGCCATCTTaGCAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCC +
Preference number: 3 (lower is better)
Translates to: KKQELKGTAQPS*QSIFGCEEVSP
Trigger: GGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCCCTTTGAGTTCCTGCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR CCA 72 bp TTTTTCTTTTCCATTTCGTTGAAATATTTACAGCAATaGGGAAGGAGGAGGAGAGAGGAAGGAGTAAGAGGG +
Preference number: 3 (lower is better)
Translates to: FFFSISLKYLQQ*GRRRREEGVRG
Trigger: CCCTCTTACTCCTTCCTCTCTCCTCCTCCTTCCCCATTGCTGTAAATATTTCAACGAAATGGAAAAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCGAGCGGGGTGGTGGCTaGGGGCGAGGCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLAERGGG*GRGCAG
Trigger: ACCAGCACAGCCTCGCCCGCAGCCACCACCCCGCTC...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCTCCACCAGCATGCCCTaGTGGGTGGCCGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLASTSMP*WVAGHW
Trigger: CCAGTGGCCGGCCACCCAGCAGGGCATGCTGGTGGA...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCCAGGTCCCAGCTGGTTaGTGGCACCCACTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLAQVPAG*WHPLGA
Trigger: CGCACCCAGTGGGTGCCATCAACCAGCTGGGACCTG...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCGTGAGTGCCCCCGGGTaGGGAGCGGATGCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLAVSAPG*GADAAV
Trigger: TACTGCTGCATCCGCTCCCCACCCGGGGGCACTCAC...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGCCACTGGGTGCGTGGTaGGGGGTGCCCGGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWPLGAW*GVPGGA
Trigger: CGCTCCGCCGGGCACCCCTCACCACGCACCCAGTGG...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGCCACTGGGTGCGTGGTaGGGGGTGCCCGGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQPLGAW*GVPGGA
Trigger: CGCTCCGCCGGGCACCCCTCACCACGCACCCAGTGG...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGGTGCGTGGTGAGGGGTaGCCGGCGGAGCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGVRGEG*PAERGG
Trigger: ACCACCCCGCTCCGCCGGGCACCCCTCACCACGCAC...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCCCCTGCGGGGAGTTGTaGTTCATCAGGAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLAPCGEL*FIRSRP
Trigger: GGGGCGACTCCTGATGAAGCACAACTCCCCGCAGGG...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGGCATGCCCTGCTGGGTaGCCGGCCACTGGACCCGCC +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRACPAG*PATGPA
Trigger: GGCGGGTCCAGTGGCCGGCCACCCAGCAGGGCATGC...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGCCACTGGGTGCGTGGTaGGGGGTGCCCGGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: VREGPWNCPLPSSESSGKPLGAW*GVPGGA
Trigger: CGCTCCGCCGGGCACCCCTCACCACGCACCCAGTGG...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCCCCTTCTCCCCTAATTaGTGGGGACAAGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLAPFSPN*WGQASP
Trigger: GGGGCTGGCTTGTCCCCATCAATTAGGGGAGAAGGG...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGGGCCACCCGGGCCTaGTTCGCCGGCCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRRATRA*FAGQLH
Trigger: GTGAAGCTGGCCGGCGAAGCAGGCCCGGGTGGCCCT...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGGCCCGGCTCAGGCCTTaGGTGGCCGAGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRARLRP*VAEVTR
Trigger: CCTGGTCACCTCGGCCACCCAAGGCCTGAGCCGGGC...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGGCCCGGCTCAGGCCTTaGGTGGCCGAGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGARLRP*VAEVTR
Trigger: CCTGGTCACCTCGGCCACCCAAGGCCTGAGCCGGGC...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGTGGGCAGGCGGTAGGTaGTGGTGTGGCGGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGWAGGR*WCGGRP
Trigger: TGGCCGCCCGCCACACCACCACCTACCGCCTGCCCA...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGTGGCTGGGCCAGCACTaGGGTCGGGCGGCCCGAACT +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRWLGQH*GRAART
Trigger: AGTTCGGGCCGCCCGACCCCAGTGCTGGCCCAGCCA...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGTGGGTGGCCGGCCACTaGACCCGCCGTACCTCTCGG +
Preference number: 4 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPEWVAGH*TRRTSR
Trigger: CCGAGAGGTACGGCGGGTCCAGTGGCCGGCCACCCA...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGGCATGCCCTGCTGGGTaGCCGGCCACTGGACCCGCC +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWACPAG*PATGPA
Trigger: GGCGGGTCCAGTGGCCGGCCACCCAGCAGGGCATGC...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCCCGGGCCACCAGGGCTaGCGGGCGCGAGGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSPGHQG*RARGVV
Trigger: TACTACACCTCGCGCCCGCCAGCCCTGGTGGCCCGG...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGCCGGGCCACCAGGGCTaGCGGGCGCGAGGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGPGHQG*RARGVV
Trigger: TACTACACCTCGCGCCCGCCAGCCCTGGTGGCCCGG...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGCCGGGCCACCAGGGCTaGCGGGCGCGAGGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRPGHQG*RARGVV
Trigger: TACTACACCTCGCGCCCGCCAGCCCTGGTGGCCCGG...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGCGGCAATGCAGGGGCTaGGCTAGGGTGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGRQCRG*ARVAWG
Trigger: GCCCCAGGCCACCCTAGCCCAGCCCCTGCATTGCCG...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGCGGCAATGCAGGGGCTaGGCTAGGGTGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPERQCRG*ARVAWG
Trigger: GCCCCAGGCCACCCTAGCCCAGCCCCTGCATTGCCG...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCGGGGCAGCCACAGGCTaGGCTGCTTCCCGGGACAGG +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSGAATG*AASRDR
Trigger: CCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCC...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCGGGGCGGCTTTGCACTaGACTGCAGTGATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLAGAALH*TAVMSS
Trigger: GCTGGACATCACTGCAGTCCAGTGCAAAGCCGCCCC...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGGTGCGTGGTGAGGGGTaGCCGGCGGAGCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLVRGEG*PAERGG
Trigger: ACCACCCCGCTCCGCCGGGCACCCCTCACCACGCAC...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGCAATGGCAGCCGCGATaGCCACCACCAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGQWQPR*PPPGPG
Trigger: TCCCGGCCCTGGTGGTGGGCATCGCGGCTGCCATTG...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGGGGGCAGGGTGTCCATaGCACAGGCTTCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRGAGCP*HRLPGL
Trigger: GAGGCCGGGAAGCCTGTGGCATGGACACCCTGCCCC...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGCGCCGTCCTCGGCCGTaGAGCTCTCCGACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPERRPRP*SSPTRP
Trigger: TGGACGAGTCGGAGAGCTGCACGGCCGAGGACGGCG...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCTGGGCCCCTCAGGGCTaGTGTCCGGGTAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSWAPQG*CPGRRV
Trigger: CACCCTCCTACCCGGACAGCAGCCCTGAGGGGCCCA...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGTGGGCCCCTCAGGGCTaGTGTCCGGGTAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGWAPQG*CPGRRV
Trigger: CACCCTCCTACCCGGACAGCAGCCCTGAGGGGCCCA...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGGAAGCCACCCGGCGATaGCGGCTGGAACAGGACCCG +
Preference number: 4 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPEEATRR*RLEQDP
Trigger: CGGGTCCTGTTCCAGCCGGCATCGCCGGGTGGCTTC...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGGCAGGCACCACGGCCTaGACCACCAGCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGAGTTA*TTSLSS
Trigger: GCTGGACAGGCTGGTGGTCCAGGCCGTGGTGCCTGC...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGTGGGCAGGCGGTAGGTaGTGGTGTGGCGGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWWAGGR*WCGGRP
Trigger: TGGCCGCCCGCCACACCACCACCTACCGCCTGCCCA...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GATGCACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCTGGCTGGGCCAGCACTaGGGTCGGGCGGCCCGAACT +
Preference number: 4 (lower is better)
Translates to: DARTRRSPGCQASSAALLWLGQH*GRAART
Trigger: AGTTCGGGCCGCCCGACCCCAGTGCTGGCCCAGCCA...GAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGTGCATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGTGGCTGGGCCAGCACTaGGGTCGGGCGGCCCGAACT +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWWLGQH*GRAART
Trigger: AGTTCGGGCCGCCCGACCCCAGTGCTGGCCCAGCCA...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GATGCACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCTGGGTGGCCGGCCACTaGACCCGCCGTACCTCTCGG +
Preference number: 4 (lower is better)
Translates to: DARTRRSPGCQASSAALLWVAGH*TRRTSR
Trigger: CCGAGAGGTACGGCGGGTCCAGTGGCCGGCCACCCA...GAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGTGCATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGGCATGCCCTGCTGGGTaGCCGGCCACTGGACCCGCC +
Preference number: 4 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLACPAG*PATGPA
Trigger: GGCGGGTCCAGTGGCCGGCCACCCAGCAGGGCATGC...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGACCAGCATGCCCTGCTaGGTGGCCGGCCACTGGACC +
Preference number: 4 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPETSMPC*VAGHWT
Trigger: GGTCCAGTGGCCGGCCACCCAGCAGGGCATGCTGGT...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCGCGAAGTTGGTGAGGTaGCTGCAGGCACACGTGGTA +
Preference number: 4 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLAAKLVR*LQAHVV
Trigger: TACCACGTGTGCCTGCAGCCACCTCACCAACTTCGC...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGGCCCCCTGGCACAGGTaGCACAGGGGGCTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLAPWHR*HRGLRR
Trigger: CCGCCTGAGCCCCCTGTGCCACCTGTGCCAGGGGGC...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGGCAGGTTGGCCCCGCTaGCATAGAGGGAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPEAGWPR*HRGSPG
Trigger: GCCGGGACTCCCTCTATGCCAGCGGGGCCAACCTGC...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGCCCAGCCCTGGCACCTaGCTTCGTCTTCCCTGCGGG +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRPSPGT*LRLPCG
Trigger: CCCGCAGGGAAGACGAAGCCAGGTGCCAGGGCTGGG...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGAGCGGGCAGGCTCCCTaGCATTGTCGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGSGQAP*HCRPAG
Trigger: TCCTGCTGGCCGACAATGTCAGGGAGCCTGCCCGCT...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGCCTGCCACACAGCTCTaGGGCCTGGAAGCCACCCGG +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGPATQL*GLEATR
Trigger: CCGGGTGGCTTCCAGGCCTCAGAGCTGTGTGGCAGG...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCGAGCGGGGTGGTGGCTaGGGGCGAGGCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSERGGG*GRGCAG
Trigger: ACCAGCACAGCCTCGCCCGCAGCCACCACCCCGCTC...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGATGGCACCCACTGGGTaGGTGGTGAGGGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGMAPTG*VVRGAR
Trigger: CCGGGCACCCCTCACCACGCACCCAGTGGGTGCCAT...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGCAATGGCAGCCGCGATaGCCACCACCAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGQWQPR*PPPGPG
Trigger: TCCCGGCCCTGGTGGTGGGCATCGCGGCTGCCATTG...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCGGCCCTTGGCCGCGCTaGTGCTCCCCCGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSGPWPR*CSPAGC
Trigger: ACAACCTGCGGGGGAGCAGCAGCGCGGCCAAGGGCC...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGCGCCGTCCTCGGCCGTaGAGCTCTCCGACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWRRPRP*SSPTRP
Trigger: TGGACGAGTCGGAGAGCTGCACGGCCGAGGACGGCG...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGCTCAAGGCCTGGGGCTaGCAGGTAGCCCTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPELKAWG*QVALVA
Trigger: AGCCACGAGGGCTACCTGGCAGCCCCAGGCCTTGAG...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGCCAGTCCCCCTGCCCTaGGGCCTTTTCCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGPVPLP*GLFPVS
Trigger: GGAGACTGGGAAAAGGCCGCAGGGCAGGGGGACTGG...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGCCAGCAGCGCTGCTCTaGTCCGGAGAAAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWPAALL*SGESPG
Trigger: GCCCGGGCTTTCTCCGGAGCAGAGCAGCGCTGCTGG...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GATGCACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCGGGGGCCGGGACAGGTaGTCAGGACACATCCCGAGC +
Preference number: 4 (lower is better)
Translates to: DARTRRSPGCQASSAALLGGRDR*SGHIPS
Trigger: GCTCGGGATGTGTCCTGAGCACCTGTCCCGGCCCCC...GAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGTGCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GATGCACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCAGCCACAGGCTGGGCTaGTTCCCGGGACAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: DARTRRSPGCQASSAALLSHRLG*FPGQAS
Trigger: GCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCT...GAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGTGCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAAGCCACCCGGCGATaGCGGCTGGAACAGGACCCG +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQEATRR*RLEQDP
Trigger: CGGGTCCTGTTCCAGCCGGCATCGCCGGGTGGCTTC...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGCTAGGCGGGCCATGGTaGCAGCCGGGTGCGTGTCCG +
Preference number: 4 (lower is better)
Translates to: VREGPWNCPLPSSESSGKLGGPW*QPGACP
Trigger: CGGACACGCACCCGGCTGCCACCATGGCCCGCCTAG...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCCGGCTAGGCGGGCCATaGTGGCAGCCGGGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSRLGGP*WQPGAC
Trigger: ACACGCACCCGGCTGCCACCATGGCCCGCCTAGCCG...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGGCAGGCGGTAGGTGGTaGTGTGGCGGGCGGCCACGT +
Preference number: 4 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLAGGRW*CGGRPR
Trigger: ACGTGGCCGCCCGCCACACCACCACCTACCGCCTGC...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCTGCCATCCACGCGGTTaGGCAGGCGGTAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSCHPRG*AGGRWW
Trigger: CCACCACCTACCGCCTGCCCAACCGCGTGGATGGCA...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGGTCGGGCCAGCTCGCTaGCGATGTTGGCCGCGTTCT +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGVGPAR*RCWPRS
Trigger: AGAACGCGGCCAACATCGCCAGCGAGCTGGCCCGAC...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGCTGACTCGCGCTCGATaGGCCGCAGGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWLTRAR*AAGPAA
Trigger: AGCTGCAGGCCCTGCGGCCCATCGAGCGCGAGTCAG...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCGGAACAGCAGCGCGATaGCCCCCAGCGCCCAGGATT +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSGTAAR*PPAPRI
Trigger: AATCCTGGGCGCTGGGGGCCATCGCGCTGCTGTTCC...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGGGAACAGCAGCGCGATaGCCCCCAGCGCCCAGGATT +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGGTAAR*PPAPRI
Trigger: AATCCTGGGCGCTGGGGGCCATCGCGCTGCTGTTCC...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGGGAACAGCAGCGCGATaGCCCCCAGCGCCCAGGATT +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRGTAAR*PPAPRI
Trigger: AATCCTGGGCGCTGGGGGCCATCGCGCTGCTGTTCC...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGCAGGTTGGCCCCGCTaGCATAGAGGGAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQAGWPR*HRGSPG
Trigger: GCCGGGACTCCCTCTATGCCAGCGGGGCCAACCTGC...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCGTGAGTCCCGCAGGTTaGCCCCGCTGGCATAGAGGG +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSVSPAG*PRWHRG
Trigger: CCCTCTATGCCAGCGGGGCCAACCTGCGGGACTCAC...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCTGGGCCACCAGCCCCTaGTCCATGAGGTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSWATSP*SMRCPQ
Trigger: CTGAGGGCACCTCATGGACCAGGGGCTGGTGGCCCA...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGTGGGCCACCAGCCCCTaGTCCATGAGGTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGWATSP*SMRCPQ
Trigger: CTGAGGGCACCTCATGGACCAGGGGCTGGTGGCCCA...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGGGCACCTGGAGAGAGTaGCCCACCAGCCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPEGTWRE*PTSHCL
Trigger: GAGGCAGTGGCTGGTGGGCCACTCTCTCCAGGTGCC...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCTGGCTGAGGGGCACCTaGAGAGAGTGGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSWLRGT*REWPTS
Trigger: GCTGGTGGGCCACTCTCTCCAGGTGCCCCTCAGCCA...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGTGTAAAAAGCTGCTCTaGCGGCCCGCCCGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWCKKLL*RPARPG
Trigger: GCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACA...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGTCCTGGCCCTCCTCCTaGTGTCGGGGGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGSWPSS*CRGQPQ
Trigger: CTGTGGCTGCCCCCGACACCAGGAGGAGGGCCAGGA...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCAGATACAAGGAAGGCTaGGCAGGGAGGAAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLARYKEG*AGRKLA
Trigger: GGCCAACTTCCTCCCTGCCCAGCCTTCCTTGTATCT...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCGCCAGACTGGTGCTCTaGCTCGTGTGTCGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSARLVL*LVCRGG
Trigger: CCCACCTCGACACACGAGTCAGAGCACCAGTCTGGC...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGGGACCCCACACACCATaGAGGCGTTGGATGCCGAGC +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGGPHTP*RRWMPS
Trigger: GCTCGGCATCCAACGCCTTCATGGTGTGTGGGGTCC...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGCAGGTCCCAGCTGGTTaGTGGCACCCACTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGQVPAG*WHPLGA
Trigger: CGCACCCAGTGGGTGCCATCAACCAGCTGGGACCTG...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGAGCGGGCAGGCTCCCTaGCATTGTCGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGSGQAP*HCRPAG
Trigger: TCCTGCTGGCCGACAATGTCAGGGAGCCTGCCCGCT...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGTCCGGGTAGGAGGGTaGGTCCCGCAGGTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWVRVGG*VPQVGP
Trigger: GGGGCCAACCTGCGGGACTCACCCTCCTACCCGGAC...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGGGGAAACCCTGTCTGTaGACCCTGGCACCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGGKPCL*TLAPQA
Trigger: GGCCTGAGGTGCCAGGGTTCACAGACAGGGTTTCCC...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCATGGTGGCAGCCGGGTaGGTGTCCGGAGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSMVAAG*VSGALS
Trigger: ACTGAGAGCTCCGGACACGCACCCGGCTGCCACCAT...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCCCTGCAGCGGGTCCTTaGACCATGCGCCAGACTGGT +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSPAAGP*TMRQTG
Trigger: ACCAGTCTGGCGCATGGTGCAAGGACCCGCTGCAGG...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGAGGGCATCACGTAGATaGGGTCACCCGCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGRASRR*GHPPAA
Trigger: CGCTGCAGGCGGGTGACCGCATCTACGTGATGCCCT...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAGGCCCTTGGCCGCGCTaGTGCTCCCCCGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGGPWPR*CSPAGC
Trigger: ACAACCTGCGGGGGAGCAGCAGCGCGGCCAAGGGCC...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGCTCAAGGCCTGGGGCTaGCAGGTAGCCCTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQLKAWG*QVALVA
Trigger: AGCCACGAGGGCTACCTGGCAGCCCCAGGCCTTGAG...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGGTGACCAGCTGCATCTaGCCGTCCCCATCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWVTSCI*PSPSGP
Trigger: AGGGCCCGATGGGGACGGGCAGATGCAGCTGGTCAC...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGTCTGTCCTGCCTCACTaGTCCCTCTGGGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGSVLPH*SLWVQP
Trigger: CGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAGA...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCCCCTGCGGGGAGTTGTaGTTCATCAGGAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSPCGEL*FIRSRP
Trigger: GGGGCGACTCCTGATGAAGCACAACTCCCCGCAGGG...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGCCAGGCCAGCAGCGCTaGTCTGCTCCGGAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGPGQQR*SAPEKA
Trigger: GGCTTTCTCCGGAGCAGAGCAGCGCTGCTGGCCTGG...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGCGGAGAAGTCCTGGCTaGCAGGCCAGCAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWRRSPG*QASSAA
Trigger: AGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCG...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCGGCGGGGACTGGGGATaGACGTACACGGAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSGGDWG*TYTEKS
Trigger: GGACTTCTCCGTGTACGTGCATCCCCAGTCCCCGCC...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGGGGGGCCGGGACAGGTaGTCAGGACACATCCCGAGC +
Preference number: 4 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLGGRDR*SGHIPS
Trigger: GCTCGGGATGTGTCCTGAGCACCTGTCCCGGCCCCC...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCCTGGGGAAACGGCAATaGAGGGGCTGGGCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSLGKRQ*RGWARV
Trigger: CACCCTAGCCCAGCCCCTGCATTGCCGTTTCCCCAG...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCGGCCAGCTCCTCGCCTaGTCATGCCTCCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSGQLLA*SCLLPA
Trigger: AGCGGGCAGGAGGCATGAGCAGGCGAGGAGCTGGCC...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGGCAGGCACCACGGCCTaGACCACCAGCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: VREGPWNCPLPSSESSGKAGTTA*TTSLSS
Trigger: GCTGGACAGGCTGGTGGTCCAGGCCGTGGTGCCTGC...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGACTAGGCGGGCCATGGTaGCAGCCGGGTGCGTGTCCG +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGLGGPW*QPGACP
Trigger: CGGACACGCACCCGGCTGCCACCATGGCCCGCCTAG...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGACGGCTAGGCGGGCCATaGTGGCAGCCGGGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGRLGGP*WQPGAC
Trigger: ACACGCACCCGGCTGCCACCATGGCCCGCCTAGCCG...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGGGCACCGCAGCTCGATaGGGTAGCCTTCACACGCCA +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGGTAAR*GSLHTP
Trigger: TGGCGTGTGAAGGCTACCCCATCGAGCTGCGGTGCC...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGATGGGCAGGCGGTAGGTaGTGGTGTGGCGGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGWAGGR*WCGGRP
Trigger: TGGCCGCCCGCCACACCACCACCTACCGCCTGCCCA...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GATGCACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCTGCCATCCACGCGGTTaGGCAGGCGGTAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: DARTRRSPGCQASSAALLCHPRG*AGGRWW
Trigger: CCACCACCTACCGCCTGCCCAACCGCGTGGATGGCA...GAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGTGCATC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCGTTGATGGCACCCACTaGGTGCGTGGTGAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSVDGTH*VRGEGC
Trigger: GCACCCCTCACCACGCACCCAGTGGGTGCCATCAAC...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGCGCAGGGCCTGCAGCTaGGCATCCAGGATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQRRACS*ASRMSS
Trigger: GCTGGACATCCTGGATGCCCAGCTGCAGGCCCTGCG...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGCGTCGAGGAGCATGGTaGCCGTGTGCACCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWRRGAW*PCAPAP
Trigger: CGGAGCAGGTGCACACGGCCACCATGCTCCTCGACG...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GATGCACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCGGAACAGCAGCGCGATaGCCCCCAGCGCCCAGGATT +
Preference number: 4 (lower is better)
Translates to: DARTRRSPGCQASSAALLGTAAR*PPAPRI
Trigger: AATCCTGGGCGCTGGGGGCCATCGCGCTGCTGTTCC...GAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGTGCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGTGAGTGCCCCCGGGTaGGGAGCGGATGCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQVSAPG*GADAAV
Trigger: TACTGCTGCATCCGCTCCCCACCCGGGGGCACTCAC...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCGCTGCAGCACGGGGTTaGTCAGCAGGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSAAARG*SAGGSP
Trigger: TGGGGAACCACCTGCTGACCAACCCCGTGCTGCAGC...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGGCTGCAGCACGGGGTTaGTCAGCAGGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGAAARG*SAGGSP
Trigger: TGGGGAACCACCTGCTGACCAACCCCGTGCTGCAGC...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGGGGTGTTGTAGGGACTaGTGCCCCCACGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWGCCRD*CPHGAA
Trigger: TGCAGCCCCGTGGGGGCACCAGTCCCTACAACACCC...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGCTCCCAAGGGGTGCTTaGGTTCCCGGTAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGLPRGA*VPGSSL
Trigger: CAGGGAGCTACCGGGAACCCAAGCACCCCTTGGGAG...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGGTGAGTCCCGCAGGTTaGCCCCGCTGGCATAGAGGG +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGVSPAG*PRWHRG
Trigger: CCCTCTATGCCAGCGGGGCCAACCTGCGGGACTCAC...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGTGGGCCACCAGCCCCTaGTCCATGAGGTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWWATSP*SMRCPQ
Trigger: CTGAGGGCACCTCATGGACCAGGGGCTGGTGGCCCA...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGGCACCTGGAGAGAGTaGCCCACCAGCCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQGTWRE*PTSHCL
Trigger: GAGGCAGTGGCTGGTGGGCCACTCTCTCCAGGTGCC...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGCCTGTCTGTGAACCCTaGCACCTCAGGCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGPVCEP*HLRPPG
Trigger: ACCTGGGGGCCTGAGGTGCCAGGGTTCACAGACAGG...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGGGTCATTGGGTGCACTaGGAGGCAGAGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRGHWVH*EAEGAG
Trigger: ACCTGCCCCCTCTGCCTCCCAGTGCACCCAATGACC...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCTACACGGAGAAGTCCTaGCTGCCAGGCCAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSYTEKS*LPGQQR
Trigger: GCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTA...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGTACACGGAGAAGTCCTaGCTGCCAGGCCAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPEYTEKS*LPGQQR
Trigger: GCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTA...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGTGTAAAAAGCTGCTCTaGCGGCCCGCCCGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: VREGPWNCPLPSSESSGKCKKLL*RPARPG
Trigger: GCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACA...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGGTCCGGGAAGGGCCATaGAACTGTCCCTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRVREGP*NCPLPS
Trigger: GGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGGGGCAGCCACAGGCTaGGCTGCTTCCCGGGACAGG +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWGAATG*AASRDR
Trigger: CCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCC...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGGGACCCCACACACCATaGAGGCGTTGGATGCCGAGC +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGGPHTP*RRWMPS
Trigger: GCTCGGCATCCAACGCCTTCATGGTGTGTGGGGTCC...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCAGCGGGCAGGCTCCCTaGCATTGTCGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSSGQAP*HCRPAG
Trigger: TCCTGCTGGCCGACAATGTCAGGGAGCCTGCCCGCT...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGGGCTGGAGTCGGGCTTaGGCACAGATGAGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGGWSRA*AQMSFG
Trigger: TCCGAAGCTCATCTGTGCTCAAGCCCGACTCCAGCC...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGCAGGTTAGAGTCCCCTaGGGGGACTGTAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGQVRVP*GDCRAH
Trigger: ATGGGCCCTACAGTCCCCTCAGGGGACTCTAACCTG...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGATGGTGGCAGCCGGGTaGGTGTCCGGAGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGMVAAG*VSGALS
Trigger: ACTGAGAGCTCCGGACACGCACCCGGCTGCCACCAT...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGATGGTGGCAGCCGGGTaGGTGTCCGGAGCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQMVAAG*VSGALS
Trigger: ACTGAGAGCTCCGGACACGCACCCGGCTGCCACCAT...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAATGGCACCCACTGGGTaGGTGGTGAGGGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGMAPTG*VVRGAR
Trigger: CCGGGCACCCCTCACCACGCACCCAGTGGGTGCCAT...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGGGGAACACCAGCTCCTaGACCTGGCCCTCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPEGNTSS*TWPSVF
Trigger: GAACACAGAGGGCCAGGTGCAGGAGCTGGTGTTCCC...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGGTGTTGCGGTCGGTCTaGAGCCCCCGCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLVLRSV*SPRRKQ
Trigger: CTGCTTCCTGCGGGGGCTGCAGACCGACCGCAACAC...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGCAATGGCAGCCGCGATaGCCACCACCAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWQWQPR*PPPGPG
Trigger: TCCCGGCCCTGGTGGTGGGCATCGCGGCTGCCATTG...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGCGGGTGGGGAGCGGATaGAGCAGTAGGAGTGACGCA +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQRVGSG*SSRSDA
Trigger: TGCGTCACTCCTACTGCTGCATCCGCTCCCCACCCG...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGTGTTGTAGGGACTGGTaGCCCCACGGGGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQCCRDW*PHGAAA
Trigger: TGCTGCAGCCCCGTGGGGGCACCAGTCCCTACAACA...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGGGGCAGGGTGTCCATaGCACAGGCTTCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWGAGCP*HRLPGL
Trigger: GAGGCCGGGAAGCCTGTGGCATGGACACCCTGCCCC...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCCCTTGGCCGCGCTGCTaGTCCCCCGCAGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSPWPRC*SPAGCC
Trigger: ACAACAACCTGCGGGGGAGCAGCAGCGCGGCCAAGG...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCGGCCCTTGGCCGCGCTaGTGCTCCCCCGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSGPWPR*CSPAGC
Trigger: ACAACCTGCGGGGGAGCAGCAGCGCGGCCAAGGGCC...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCGTGACCAGCTGCATCTaGCCGTCCCCATCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSVTSCI*PSPSGP
Trigger: AGGGCCCGATGGGGACGGGCAGATGCAGCTGGTCAC...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGCTCCTCGCCTGCTCATaGCTCCTGCCCGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQLLACS*LLPALH
Trigger: GTGAAGAGCGGGCAGGAGGCATGAGCAGGCGAGGAG...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGGTTGGCCTCTCTGTGTaGCTCAGCCCCCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGVGLSV*LSPLEL
Trigger: GAGTTCCAGGGGGCTGAGGCACACAGAGAGGCCAAC...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAGCAGGCACCACGGCCTaGACCACCAGCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGAGTTA*TTSLSS
Trigger: GCTGGACAGGCTGGTGGTCCAGGCCGTGGTGCCTGC...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GATGCACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCTTGCCCCACATCACCTaGCAGGCACCACGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: DARTRRSPGCQASSAALLLPHIT*QAPRPG
Trigger: TCCAGGCCGTGGTGCCTGCCAGGTGATGTGGGGCAA...GAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGTGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCTAGGCGGGCCATGGTaGCAGCCGGGTGCGTGTCCG +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVLGGPW*QPGACP
Trigger: CGGACACGCACCCGGCTGCCACCATGGCCCGCCTAG...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCCTAGGCGGGCCATGGTaGCAGCCGGGTGCGTGTCCG +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSLGGPW*QPGACP
Trigger: CGGACACGCACCCGGCTGCCACCATGGCCCGCCTAG...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCGCCCGGCTCAGGCCTTaGGTGGCCGAGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSARLRP*VAEVTR
Trigger: CCTGGTCACCTCGGCCACCCAAGGCCTGAGCCGGGC...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGGCGACCACCACGCACTaGGTGCGGTTGTTACACCTC +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGATTTH*VRLLHL
Trigger: GAGGTGTAACAACCGCACCCAGTGCGTGGTGGTCGC...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCGCGACCACCACGCACTaGGTGCGGTTGTTACACCTC +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSATTTH*VRLLHL
Trigger: GAGGTGTAACAACCGCACCCAGTGCGTGGTGGTCGC...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGGACTGGGGCTGTGGCTaGAGGCAGATCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWDWGCG*RQIRSQ
Trigger: CTGGGACCTGATCTGCCTCCAGCCACAGCCCCAGTC...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGATCTTCTGGGCCACCTaGTTGACCCAGGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPEIFWAT*LTQGEV
Trigger: CACCTCCCCCTGGGTCAACCAGGTGGCCCAGAAGAT...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCATCTTCTGGGCCACCTaGTTGACCCAGGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSIFWAT*LTQGEV
Trigger: CACCTCCCCCTGGGTCAACCAGGTGGCCCAGAAGAT...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGGCTCGCTGGCGATGTTaGCCGCGTTCTCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWARWRC*PRSPHS
Trigger: AGAGTGGGGAGAACGCGGCCAACATCGCCAGCGAGC...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCCGTCCCCCGCGTAGATaGAGCCCCGGGTGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSRPPRR*SPGCVG
Trigger: CCCGACACACCCGGGGCTCCATCTACGCGGGGGACG...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGCGCAGGGCCTGCAGCTaGGCATCCAGGATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: VREGPWNCPLPSSESSGKRRACS*ASRMSS
Trigger: GCTGGACATCCTGGATGCCCAGCTGCAGGCCCTGCG...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGGACGTCGAGGAGCATaGTGGCCGTGTGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQGRRGA*WPCAPA
Trigger: AGCAGGTGCACACGGCCACCATGCTCCTCGACGTCC...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGCTCGGGTACTCCTCCTaGGGGAACACCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWLGYSS*GNTSSC
Trigger: GCAGGAGCTGGTGTTCCCCCAGGAGGAGTACCCGAG...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTGCGGTAGTCAATaGCAGCCGCGATGCCCACCA +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSSCGSQ*QPRCPP
Trigger: TGGTGGGCATCGCGGCTGCCATTGACTACCGCAGCT...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGGTGAGTGCCCCCGGGTaGGGAGCGGATGCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: VREGPWNCPLPSSESSGKVSAPG*GADAAV
Trigger: TACTGCTGCATCCGCTCCCCACCCGGGGGCACTCAC...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGGGGTTGGTCAGCAGGTaGTTCCCCATGGTACCTCGG +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGGLVSR*FPMVPR
Trigger: CCGAGGTACCATGGGGAACCACCTGCTGACCAACCC...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGTCGTCCAGATCGCTCTaGTACAGCACCGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPESSRSL*YSTDWA
Trigger: GGCCCAGTCGGTGCTGTACCAGAGCGATCTGGACGA...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCTGGGCCACCAGCCCCTaGTCCATGAGGTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSWATSP*SMRCPQ
Trigger: CTGAGGGCACCTCATGGACCAGGGGCTGGTGGCCCA...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGTGGCTGAGGGGCACCTaGAGAGAGTGGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLWLRGT*REWPTS
Trigger: GCTGGTGGGCCACTCTCTCCAGGTGCCCCTCAGCCA...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCGCTGGTGCGTGTGGCTaGTGGGAAACCCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSAGACG*WETLSV
Trigger: CACAGACAGGGTTTCCCACCAGCCACACGCACCAGC...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGCCGGCAGCATTTCTaGCTGCGGAGAGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRSRQHF*LRRGAA
Trigger: AGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCT...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGCCTCACTGCTCCCTCTaGGTGCAGCCGGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGPHCSL*VQPAAF
Trigger: AAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCCGCCCCGGCGGGGACTaGGGATGCACGTACACGGAG +
Preference number: 4 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGRPGGD*GCTYTE
Trigger: CTCCGTGTACGTGCATCCCCAGTCCCCGCCGGGGCG...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCAAGCCGCCCAGAACATaGGTGTCCCGACCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSKPPRT*VSRPQP
Trigger: GGGCTGGGGTCGGGACACCCATGTTCTGGGCGGCTT...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGCCGGGGTCTGGGATTTaGGGTCAAGCCGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQPGSGI*GQAAQN
Trigger: GTTCTGGGCGGCTTGACCCCAAATCCCAGACCCCGG...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGCCCGGCGATGCCGGCTaGAACAGGACCCGATACACC +
Preference number: 4 (lower is better)
Translates to: VREGPWNCPLPSSESSGKPGDAG*NRTRYT
Trigger: GGTGTATCGGGTCCTGTTCCAGCCGGCATCGCCGGG...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGGGGACACCTGGGCTCTaGGGGCGGCTTTGCACTGGA +
Preference number: 4 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLGTPGL*GRLCTG
Trigger: TCCAGTGCAAAGCCGCCCCCAGAGCCCAGGTGTCCC...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCCGTCCCAGCTGGGGTaGGGGCGTCAAGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVPSQLG*GRQGTR
Trigger: CCTGGTGCCTTGACGCCCCCACCCCAGCTGGGACGG...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR CAA 72 bp ACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTaGGGGTCAAGCCGCCCAGAACATGGGTGTCCCGAC +
Preference number: 4 (lower is better)
Translates to: THPEPGASGVWD*GSSRPEHGCPD
Trigger: GTCGGGACACCCATGTTCTGGGCGGCTTGACCCCAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGCAGGTCCCAGCTGGTTaGTGGCACCCACTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWQVPAG*WHPLGA
Trigger: CGCACCCAGTGGGTGCCATCAACCAGCTGGGACCTG...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAGTAGTTCTTGCCGGCTaGCTCGCGCTCGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGVVLAG*LALDGP
Trigger: CGGCCCATCGAGCGCGAGTCAGCCGGCAAGAACTAC...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCGCACAGCGAAGTTGGTaGGGTGGCTGCAGGCACACG +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSAQRSW*GGCRHT
Trigger: CGTGTGCCTGCAGCCACCTCACCAACTTCGCTGTGC...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGACAGCAGCAGCTCGTTaGTGCGGCCCTGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGTAAAR*CGPGRS
Trigger: AGATCTACCAGGGCCGCATCAACGAGCTGCTGCTGT...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGGGGATTGAAGCCCACTaGCTCGGCGATGAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPEGIEAH*LGDEGV
Trigger: AACACCCTCATCGCCGAGTCAGTGGGCTTCAATCCC...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGGGGATTGAAGCCCACTaGCTCGGCGATGAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRGIEAH*LGDEGV
Trigger: AACACCCTCATCGCCGAGTCAGTGGGCTTCAATCCC...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCGGGATTGAAGCCCACTaGCTCGGCGATGAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSGIEAH*LGDEGV
Trigger: AACACCCTCATCGCCGAGTCAGTGGGCTTCAATCCC...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAGGGGCGAGGAGGGATTaGAGCCCACTGACTCGGCGA +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGGARRD*SPLTRR
Trigger: TCGCCGAGTCAGTGGGCTTCAATCCCTCCTCGCCCC...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCAGGAGTAACTGTTATTaGAGTTGCCGTTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLARSNCY*SCRSGA
Trigger: TGCCCCTGAACGGCAACTTCAATAACAGTTACTCCT...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGTCCGGGTAGGAGGGTaGGTCCCGCAGGTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPVRVGG*VPQVGP
Trigger: GGGGCCAACCTGCGGGACTCACCCTCCTACCCGGAC...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCGGGAAACCCTGTCTGTaGACCCTGGCACCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSGKPCL*TLAPQA
Trigger: GGCCTGAGGTGCCAGGGTTCACAGACAGGGTTTCCC...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GATGCACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCCCTTCTCCCCTAATTaGTGGGGACAAGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: DARTRRSPGCQASSAALLPFSPN*WGQASP
Trigger: GGGGCTGGCTTGTCCCCATCAATTAGGGGAGAAGGG...GAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGTGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGCATGCGCCAGACTGGTaGTCTGACTCGTGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRHAPDW*SDSCVE
Trigger: CTCGACACACGAGTCAGAGCACCAGTCTGGCGCATG...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGCATGCGCCAGACTGGTaGTCTGACTCGTGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPEHAPDW*SDSCVE
Trigger: CTCGACACACGAGTCAGAGCACCAGTCTGGCGCATG...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGATGCGGTCACCCGCCTaGAGCGGGTCCTTGCACCAT +
Preference number: 4 (lower is better)
Translates to: VREGPWNCPLPSSESSGKMRSPA*SGSLHH
Trigger: ATGGTGCAAGGACCCGCTGCAGGCGGGTGACCGCAT...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGCAGTCAGTGTGTCCGTaGGGTAGGGGATCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQQSVCP*GRGSRA
Trigger: TGCCCTGGATCCCCTACCGCACGGACACACTGACTG...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGACCACAAAGCCTGTaGCATCCACGCGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRRPQSL*HPRGWA
Trigger: TGCCCAACCGCGTGGATGGCACAGGCTTTGTGGTCT...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGCATAGTCCACGCGGTTaGCAGCCGCCTCGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGHSPRG*QPPRCH
Trigger: ATGACAGCGAGGCGGCTGGCAACCGCGTGGACTATG...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTGTGCGTGGTGAGGGGTaGCCGGCGGAGCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCVRGEG*PAERGG
Trigger: ACCACCCCGCTCCGCCGGGCACCCCTCACCACGCAC...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCATGGCACCCACTGGGTaGGTGGTGAGGGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSMAPTG*VVRGAR
Trigger: CCGGGCACCCCTCACCACGCACCCAGTGGGTGCCAT...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCTCCACCAGCATGCCCTaGTGGGTGGCCGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVSTSMP*WVAGHW
Trigger: CCAGTGGCCGGCCACCCAGCAGGGCATGCTGGTGGA...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGAGCATGGTGGCCGTGTaGACCTGCTCCGTGGCATTC +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQSMVAV*TCSVAF
Trigger: GAATGCCACGGAGCAGGTGCACACGGCCACCATGCT...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGAGGGCCACCCGGGCCTaGTTCGCCGGCCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPRATRA*FAGQLH
Trigger: GTGAAGCTGGCCGGCGAAGCAGGCCCGGGTGGCCCT...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCGGGGCAGGGTGTCCATaGCACAGGCTTCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVGAGCP*HRLPGL
Trigger: GAGGCCGGGAAGCCTGTGGCATGGACACCCTGCCCC...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCCGCCGTCCTCGGCCGTaGAGCTCTCCGACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSRRPRP*SSPTRP
Trigger: TGGACGAGTCGGAGAGCTGCACGGCCGAGGACGGCG...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGACCAGTCCCCCTGCCCTaGGGCCTTTTCCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGPVPLP*GLFPVS
Trigger: GGAGACTGGGAAAAGGCCGCAGGGCAGGGGGACTGG...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCACCGCCCAGTCCCCCTaGCCTGCGGCCTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGTAQSP*PAAFSQ
Trigger: CTGGGAAAAGGCCGCAGGGCAGGGGGACTGGGCGGT...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCACCGCCCAGTCCCCCTaGCCTGCGGCCTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSTAQSP*PAAFSQ
Trigger: CTGGGAAAAGGCCGCAGGGCAGGGGGACTGGGCGGT...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGGGGGCAGGTTTGCTTaGGGGGCAGGGACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWGGRFA*GAGTKS
Trigger: GCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCC...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAGTGGGCTGGGGGCCCTaGGGGGAGTTGTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGVGWGP*GELCFI
Trigger: GATGAAGCACAACTCCCCGCAGGGCCCCCAGCCCAC...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCGGCGGGGACTGGGGATaGACGTACACGGAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSGGDWG*TYTEKS
Trigger: GGACTTCTCCGTGTACGTGCATCCCCAGTCCCCGCC...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCGGCCAGCTCCTCGCCTaGTCATGCCTCCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVGQLLA*SCLLPA
Trigger: AGCGGGCAGGAGGCATGAGCAGGCGAGGAGCTGGCC...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCAGCCACAGGCTGGGCTaGTTCCCGGGACAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGSHRLG*FPGQAS
Trigger: GCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCT...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGCGGCTAGGCGGGCCATaGTGGCAGCCGGGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPRLGGP*WQPGAC
Trigger: ACACGCACCCGGCTGCCACCATGGCCCGCCTAGCCG...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGGCGACCACCACGCACTaGGTGCGGTTGTTACACCTC +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGATTTH*VRLLHL
Trigger: GAGGTGTAACAACCGCACCCAGTGCGTGGTGGTCGC...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGACTCGTGTGTCGAGGTaGGCTCCAGCACCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRTRVSR*APAPSA
Trigger: TGCAGAAGGTGCTGGAGCCCACCTCGACACACGAGT...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGCAGGCGGTAGGTGGTaGTGTGGCGGGCGGCCACGT +
Preference number: 4 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPAGGRW*CGGRPR
Trigger: ACGTGGCCGCCCGCCACACCACCACCTACCGCCTGC...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGATCTTCTGGGCCACCTaGTTGACCCAGGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWIFWAT*LTQGEV
Trigger: CACCTCCCCCTGGGTCAACCAGGTGGCCCAGAAGAT...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCTGACTCGCGCTCGATaGGCCGCAGGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVLTRAR*AAGPAA
Trigger: AGCTGCAGGCCCTGCGGCCCATCGAGCGCGAGTCAG...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGACGTCGAGGAGCATGGTaGCCGTGTGCACCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGRRGAW*PCAPAP
Trigger: CGGAGCAGGTGCACACGGCCACCATGCTCCTCGACG...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCGATAACGAAGGAGACTaGCCCGATGAAACTCCAGAT +
Preference number: 4 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLADNEGD*PDETPD
Trigger: ATCTGGAGTTTCATCGGGCCAGTCTCCTTCGTTATC...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGTGAGTGCCCCCGGGTaGGGAGCGGATGCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWVSAPG*GADAAV
Trigger: TACTGCTGCATCCGCTCCCCACCCGGGGGCACTCAC...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGTTCCCGGTAGCTCCCTaGGGAGTTGAAGACAGGGGG +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQFPVAP*GVEDRG
Trigger: CCCCCTGTCTTCAACTCCCCAGGGAGCTACCGGGAA...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCGCAGGTTGGCCCCGCTaGCATAGAGGGAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSAGWPR*HRGSPG
Trigger: GCCGGGACTCCCTCTATGCCAGCGGGGCCAACCTGC...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGGGTGCGTGTGGCTGGTaGGAAACCCTGTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGGACGW*ETLSVN
Trigger: GTTCACAGACAGGGTTTCCCACCAGCCACACGCACC...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCGGTGCGTGTGGCTGGTaGGAAACCCTGTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSGACGW*ETLSVN
Trigger: GTTCACAGACAGGGTTTCCCACCAGCCACACGCACC...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGCTGGTGCGTGTGGCTaGTGGGAAACCCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQAGACG*WETLSV
Trigger: CACAGACAGGGTTTCCCACCAGCCACACGCACCAGC...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGGCTGGTGCGTGTGGCTaGTGGGAAACCCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWAGACG*WETLSV
Trigger: CACAGACAGGGTTTCCCACCAGCCACACGCACCAGC...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGTCCAGTGGGGGCCTTTaGCAACCTCAGAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQSSGGL*QPQKLP
Trigger: GGGCAGCTTCTGAGGTTGCCAAAGGCCCCCACTGGA...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGAGCCGGCAGCATTTCTaGCTGCGGAGAGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQSRQHF*LRRGAA
Trigger: AGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCT...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGCCTCACTGCTCCCTCTaGGTGCAGCCGGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWPHCSL*VQPAAF
Trigger: AAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGCCTCACTGCTCCCTCTaGGTGCAGCCGGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGPHCSL*VQPAAF
Trigger: AAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGGGAACTGCCCAAATATaGCCACCCCTGTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWGTAQI*PPLWAG
Trigger: CCCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCC...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGCCGAGCCCACAGGACTaGGAACTGCCCAAATATGGC +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGPSPQD*ELPKYG
Trigger: GCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGG...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGCCGAGCCCACAGGACTaGGAACTGCCCAAATATGGC +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRPSPQD*ELPKYG
Trigger: GCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGG...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCCCGAGCCCACAGGACTaGGAACTGCCCAAATATGGC +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSPSPQD*ELPKYG
Trigger: GCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGG...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAAAGCCGCCCAGAACATaGGTGTCCCGACCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGKPPRT*VSRPQP
Trigger: GGGCTGGGGTCGGGACACCCATGTTCTGGGCGGCTT...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp TGTCGGGGGCAGCCACAGGCTGGGCTGCTTCCCGGGACAGGCCAGCTCCTCGCCTCACCCATGGTCTTCTaGTGTAATGGGTTAGGCCTT +
Preference number: 4 (lower is better)
Translates to: CRGQPQAGLLPGTGQLLASPMVF*CNGLGL
Trigger: AAGGCCTAACCCATTACACCAGAAGACCATGGGTGA...GGCGAGGAGCTGGCCTGTCCCGGGAAGCAGCCCAGCCTGTGGCTGCCCCCGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGCTGTACCGTCCCAGCTaGGGTGGGGGCGTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWLYRPS*GGGVKA
Trigger: TGCCTTGACGCCCCCACCCCAGCTGGGACGGTACAG...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCTCCGTAGGTCATACTTaGCGATGTTGCGCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSSVGHT*RCCACA
Trigger: AGCGCACGCGCAACATCGTCAAGTATGACCTACGGA...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGTCCGTAGGTCATACTTaGCGATGTTGCGCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGSVGHT*RCCACA
Trigger: AGCGCACGCGCAACATCGTCAAGTATGACCTACGGA...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGCCGTCTCCCCGCTCTTaGTGCGCGTCCGTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWPSPRS*CASVGH
Trigger: ATGACCTACGGACGCGCATCAAGAGCGGGGAGACGG...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGGGTTGGCATTGGTGTTaGAGGCATAGTCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRGWHWC*RHSPRG
Trigger: ACCGCGTGGACTATGCCTTCAACACCAATGCCAACC...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGCCACTGGGTGCGTGGTaGGGGGTGCCCGGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQPLGAW*GVPGGA
Trigger: CGCTCCGCCGGGCACCCCTCACCACGCACCCAGTGG...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCCAGGTCCCAGCTGGTTaGTGGCACCCACTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSQVPAG*WHPLGA
Trigger: CGCACCCAGTGGGTGCCATCAACCAGCTGGGACCTG...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCGTAGTTCTTGCCGGCTaGCTCGCGCTCGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVVVLAG*LALDGP
Trigger: CGGCCCATCGAGCGCGAGTCAGCCGGCAAGAACTAC...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCCTGTGTTCAGGACTGTaGCCTCCAGGACCACGTTCT +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSLCSGL*PPGPRS
Trigger: AGAACGTGGTCCTGGAGGTCACAGTCCTGAACACAG...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGGGCTGGAGTCGGGCTTaGGCACAGATGAGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLGWSRA*AQMSFG
Trigger: TCCGAAGCTCATCTGTGCTCAAGCCCGACTCCAGCC...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp GATGCACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCGTTGCTTCGCATGGCTaGGGTCTTGAGGGATCCGTG +
Preference number: 4 (lower is better)
Translates to: DARTRRSPGCQASSAALLVASHG*GLEGSV
Trigger: CACGGATCCCTCAAGACCTCAGCCATGCGAAGCAAC...GAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGTGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCCCACTGACTCGGCGATaGGGGTGTTGTAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSPLTRR*GCCRDW
Trigger: CCAGTCCCTACAACACCCTCATCGCCGAGTCAGTGG...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGCCACCACGCACTGGGTaGGGTTGTTACACCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWPPRTG*GCYTSV
Trigger: CACAGAGGTGTAACAACCGCACCCAGTGCGTGGTGG...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGCATGCGCCAGACTGGTaGTCTGACTCGTGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWHAPDW*SDSCVE
Trigger: CTCGACACACGAGTCAGAGCACCAGTCTGGCGCATG...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCCATAGTCCACGCGGTTaGCAGCCGCCTCGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSHSPRG*QPPRCH
Trigger: ATGACAGCGAGGCGGCTGGCAACCGCGTGGACTATG...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCAGCATGGTGGCCGTGTaGACCTGCTCCGTGGCATTC +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSSMVAV*TCSVAF
Trigger: GAATGCCACGGAGCAGGTGCACACGGCCACCATGCT...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCGTGTTGCGGTCGGTCTaGAGCCCCCGCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVVLRSV*SPRRKQ
Trigger: CTGCTTCCTGCGGGGGCTGCAGACCGACCGCAACAC...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGATGTTGTAGGGACTGGTaGCCCCACGGGGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGCCRDW*PHGAAA
Trigger: TGCTGCAGCCCCGTGGGGGCACCAGTCCCTACAACA...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGCAGAGGGGGCAGGTTTaGTTGCGGGGCAGGGACCAA +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWQRGQV*LRGRDQ
Trigger: TTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTG...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGCCCTGCGGGGAGTTGTaGTTCATCAGGAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWPCGEL*FIRSRP
Trigger: GGGGCGACTCCTGATGAAGCACAACTCCCCGCAGGG...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGTCCAGACCCAAAATCTaGTCCCCAGATAGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRSRPKI*SPDSRA
Trigger: GGCTCGGCTATCTGGGGAGCAGATTTTGGGTCTGGA...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCCAGGCCAGCAGCGCTaGTCTGCTCCGGAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVPGQQR*SAPEKA
Trigger: GGCTTTCTCCGGAGCAGAGCAGCGCTGCTGGCCTGG...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCTGGATTGTAAAAAGCTaGTCTGGCGGCCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSWIVKS*SGGPPA
Trigger: GGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCA...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCGTTGGCCTCTCTGTGTaGCTCAGCCCCCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSVGLSV*LSPLEL
Trigger: GAGTTCCAGGGGGCTGAGGCACACAGAGAGGCCAAC...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAGGCACCGCAGCTCGATaGGGTAGCCTTCACACGCCA +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGGTAAR*GSLHTP
Trigger: TGGCGTGTGAAGGCTACCCCATCGAGCTGCGGTGCC...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCCTTCTGCAGGGTCCCTaGGCACACGAAGACTTTCTG +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSLLQGP*AHEDFL
Trigger: CAGAAAGTCTTCGTGTGCCCAGGGACCCTGCAGAAG...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGACTCGTGTGTCGAGGTaGGCTCCAGCACCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQTRVSR*APAPSA
Trigger: TGCAGAAGGTGCTGGAGCCCACCTCGACACACGAGT...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGCACCATGCGCCAGACTaGTGCTCTGACTCGTGTGTC +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGHHAPD*CSDSCV
Trigger: GACACACGAGTCAGAGCACCAGTCTGGCGCATGGTG...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGCACCATGCGCCAGACTaGTGCTCTGACTCGTGTGTC +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWHHAPD*CSDSCV
Trigger: GACACACGAGTCAGAGCACCAGTCTGGCGCATGGTG...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTGCAGGCGGTAGGTGGTaGTGTGGCGGGCGGCCACGT +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCAGGRW*CGGRPR
Trigger: ACGTGGCCGCCCGCCACACCACCACCTACCGCCTGC...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTTGGGCAGGCGGTAGGTaGTGGTGTGGCGGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCWAGGR*WCGGRP
Trigger: TGGCCGCCCGCCACACCACCACCTACCGCCTGCCCA...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCTGCCATCCACGCGGTTaGGCAGGCGGTAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGCHPRG*AGGRWW
Trigger: CCACCACCTACCGCCTGCCCAACCGCGTGGATGGCA...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAGCATGCCCTGCTGGGTaGCCGGCCACTGGACCCGCC +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGACPAG*PATGPA
Trigger: GGCGGGTCCAGTGGCCGGCCACCCAGCAGGGCATGC...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGATTCCTCGAGTCCCCTTaGGGCAGGGCCTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGFLESP*GRASPP
Trigger: TGGTGGAGAGGCCCTGCCCCAAGGGGACTCGAGGAA...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCATCTTCTGGGCCACCTaGTTGACCCAGGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSIFWAT*LTQGEV
Trigger: CACCTCCCCCTGGGTCAACCAGGTGGCCCAGAAGAT...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGCCACTCTTGATCTTCTaGGCCACCTGGTTGACCCAG +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGPLLIF*ATWLTQ
Trigger: CTGGGTCAACCAGGTGGCCCAGAAGATCAAGAGTGG...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGCTCGCTGGCGATGTTaGCCGCGTTCTCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWARWRC*PRSPHS
Trigger: AGAGTGGGGAGAACGCGGCCAACATCGCCAGCGAGC...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTCGTCCCCCGCGTAGATaGAGCCCCGGGTGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCRPPRR*SPGCVG
Trigger: CCCGACACACCCGGGGCTCCATCTACGCGGGGGACG...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCCGTCGAGGAGCATGGTaGCCGTGTGCACCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSRRGAW*PCAPAP
Trigger: CGGAGCAGGTGCACACGGCCACCATGCTCCTCGACG...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAGGACCACGTTCTCCTTaGCAGCCAGGAAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGGPRSP*QPGSGQ
Trigger: CTGCCCGCTTCCTGGCTGCCAAGGAGAACGTGGTCC...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGCGGCCAGCTTCACTGTaGCATTCTCCGTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWRPASL*HSPWTG
Trigger: TCCTGTCCACGGAGAATGCCACAGTGAAGCTGGCCG...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGTGGTATGGGTCTTGTTaGACTCCACCAGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWWYGSC*TPPGGS
Trigger: GCTGCCGCCTGGTGGAGTCCAACAAGACCCATACCA...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCCAGGCACACGTGGTATaGGTCTTGTTGGACTCCACC +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSQAHVV*VLLDST
Trigger: GGTGGAGTCCAACAAGACCCATACCACGTGTGCCTG...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCGGGTGTTGTAGGGACTaGTGCCCCCACGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVGCCRD*CPHGAA
Trigger: TGCAGCCCCGTGGGGGCACCAGTCCCTACAACACCC...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCTTCCCGGTAGCTCCCTaGGGAGTTGAAGACAGGGGG +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSFPVAP*GVEDRG
Trigger: CCCCCTGTCTTCAACTCCCCAGGGAGCTACCGGGAA...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAGCCCCCTGGCACAGGTaGCACAGGGGGCTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGAPWHR*HRGLRR
Trigger: CCGCCTGAGCCCCCTGTGCCACCTGTGCCAGGGGGC...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCGGCACCTGGAGAGAGTaGCCCACCAGCCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSGTWRE*PTSHCL
Trigger: GAGGCAGTGGCTGGTGGGCCACTCTCTCCAGGTGCC...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGCCTGTCTGTGAACCCTaGCACCTCAGGCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWPVCEP*HLRPPG
Trigger: ACCTGGGGGCCTGAGGTGCCAGGGTTCACAGACAGG...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGGGTGCGTGTGGCTGGTaGGAAACCCTGTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWGACGW*ETLSVN
Trigger: GTTCACAGACAGGGTTTCCCACCAGCCACACGCACC...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGGGGAGAGTCTGGAAGTaGGCTGCACCCTTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGGRVWK*AAPFQV
Trigger: AACTTGGAAGGGTGCAGCCCACTTCCAGACTCTCCC...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCAAGGGAGGGGGTCATTaGGTGCACTGGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSKGGGH*VHWEAE
Trigger: CTCTGCCTCCCAGTGCACCCAATGACCCCCTCCCTT...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCGGAACTGCCCAAATATaGCCACCCCTGTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSGTAQI*PPLWAG
Trigger: CCCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCC...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGCTCCTCAGAGTCGTCTaGCAAGACTGTCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWLLRVV*QDCPWP
Trigger: AGGCCAGGGACAGTCTTGCCAGACGACTCTGAGGAG...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGAGTCAACGGAGGAGATaGACTGGTAGGGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQSQRRR*TGRGWG
Trigger: TCCCCAACCCCTACCAGTTCATCTCCTCCGTTGACT...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCTGCGGCTGTTCTGCTTaGTGGTTTTGGCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSCGCSA*WFWQTA
Trigger: AGCTGTCTGCCAAAACCATCAAGCAGAACAGCCGCA...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGCAGCCAGGAAGAGGTTaGTGCACAGGTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRQPGRG*CTGSCG
Trigger: TCCACAAGAACCTGTGCATCAACCTCTTCCTGGCTG...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCGTCCGGGTAGGAGGGTaGGTCCCGCAGGTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPVRVGG*VPQVGP
Trigger: GGGGCCAACCTGCGGGACTCACCCTCCTACCCGGAC...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGCAGGTTAGAGTCCCCTaGGGGGACTGTAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWQVRVP*GDCRAH
Trigger: ATGGGCCCTACAGTCCCCTCAGGGGACTCTAACCTG...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCATGGCAGCAGCAGGCTaGGACCCGAAGATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSMAAAG*DPKMFE
Trigger: TTCAAACATCTTCGGGTCTCAGCCTGCTGCTGCCAT...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGAGACCACAAAGCCTGTaGCATCCACGCGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLRPQSL*HPRGWA
Trigger: TGCCCAACCGCGTGGATGGCACAGGCTTTGTGGTCT...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGAACCCGTCTCCCACGTaGCCTCAAAGCGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLNPSPT*PQSAVC
Trigger: ACACACTGCGCTTTGAGGGCACGTGGGAGACGGGTT...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGCATGAAGGCGTTGGATaGCGAGCGCTTGTCGTAACC +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWHEGVG*RALVVT
Trigger: GGTTACGACAAGCGCTCGGCATCCAACGCCTTCATG...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAGAGCGGGGTGGTGGCTaGGGGCGAGGCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGERGGG*GRGCAG
Trigger: ACCAGCACAGCCTCGCCCGCAGCCACCACCCCGCTC...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGGATGTCCAGCAGCTaGTCCATCAGCTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRRMSSS*SISFTE
Trigger: CTCTGTGAAGCTGATGGAGCAGCTGCTGGACATCCT...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGTGGCCGTGTGCACCTaGTCCGTGGCATTCATGTCC +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWVAVCT*SVAFMS
Trigger: GGACATGAATGCCACGGAGCAGGTGCACACGGCCAC...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGGGAACACCAGCTCCTaGACCTGGCCCTCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWGNTSS*TWPSVF
Trigger: GAACACAGAGGGCCAGGTGCAGGAGCTGGTGTTCCC...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGAGGGCCACCCGGGCCTaGTTCGCCGGCCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMRATRA*FAGQLH
Trigger: GTGAAGCTGGCCGGCGAAGCAGGCCCGGGTGGCCCT...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGTCTCGGTGCCGTAGCTaGGGTAGTCAATGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWSRCRS*GSQWQP
Trigger: CGGCTGCCATTGACTACCGCAGCTACGGCACCGAGA...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCAGCAGGCCTTCTCGGTaGCGTAGCTGCGGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSSRPSR*RSCGSQ
Trigger: TTGACTACCGCAGCTACGGCACCGAGAAGGCCTGCT...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGAGTGACGCAGGCACTTaGTGTACTCCTTGTGCACCT +
Preference number: 4 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPESDAGT*CTPCAP
Trigger: AGGTGCACAAGGAGTACAGCAAGTGCCTGCGTCACT...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCGGGTGGGGAGCGGATaGAGCAGTAGGAGTGACGCA +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVRVGSG*SSRSDA
Trigger: TGCGTCACTCCTACTGCTGCATCCGCTCCCCACCCG...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCGGCCCTTGGCCGCGCTaGTGCTCCCCCGCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPGPWPR*CSPAGC
Trigger: ACAACCTGCGGGGGAGCAGCAGCGCGGCCAAGGGCC...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGAGTCTGGAAGTGGGCTaGACCCTTCCAAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQSLEVG*TLPSSP
Trigger: GGGAGAACTTGGAAGGGTGCAGCCCACTTCCAGACT...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTACCGCCCAGTCCCCCTaGCCTGCGGCCTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCTAQSP*PAAFSQ
Trigger: CTGGGAAAAGGCCGCAGGGCAGGGGGACTGGGCGGT...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGTCCAGACCCAAAATCTaGTCCCCAGATAGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWSRPKI*SPDSRA
Trigger: GGCTCGGCTATCTGGGGAGCAGATTTTGGGTCTGGA...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAGCGACCACCACGCACTaGGTGCGGTTGTTACACCTC +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGATTTH*VRLLHL
Trigger: GAGGTGTAACAACCGCACCCAGTGCGTGGTGGTCGC...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAGCAGGCGGTAGGTGGTaGTGTGGCGGGCGGCCACGT +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGAGGRW*CGGRPR
Trigger: ACGTGGCCGCCCGCCACACCACCACCTACCGCCTGC...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGTGGCTGGGCCAGCACTaGGGTCGGGCGGCCCGAACT +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMWLGQH*GRAART
Trigger: AGTTCGGGCCGCCCGACCCCAGTGCTGGCCCAGCCA...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTACCAGCATGCCCTGCTaGGTGGCCGGCCACTGGACC +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCTSMPC*VAGHWT
Trigger: GGTCCAGTGGCCGGCCACCCAGCAGGGCATGCTGGT...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCTTCCTCGAGTCCCCTTaGGGCAGGGCCTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGFLESP*GRASPP
Trigger: TGGTGGAGAGGCCCTGCCCCAAGGGGACTCGAGGAA...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCGCTCGCTGGCGATGTTaGCCGCGTTCTCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVARWRC*PRSPHS
Trigger: AGAGTGGGGAGAACGCGGCCAACATCGCCAGCGAGC...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGCGTCCCCCGCGTAGATaGAGCCCCGGGTGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMRPPRR*SPGCVG
Trigger: CCCGACACACCCGGGGCTCCATCTACGCGGGGGACG...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTCTGACTCGCGCTCGATaGGCCGCAGGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCLTRAR*AAGPAA
Trigger: AGCTGCAGGCCCTGCGGCCCATCGAGCGCGAGTCAG...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGCGTCGAGGAGCATGGTaGCCGTGTGCACCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPRRGAW*PCAPAP
Trigger: CGGAGCAGGTGCACACGGCCACCATGCTCCTCGACG...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCGGACGTCGAGGAGCATaGTGGCCGTGTGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSGRRGA*WPCAPA
Trigger: AGCAGGTGCACACGGCCACCATGCTCCTCGACGTCC...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCGGACGTCGAGGAGCATaGTGGCCGTGTGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVGRRGA*WPCAPA
Trigger: AGCAGGTGCACACGGCCACCATGCTCCTCGACGTCC...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCGGACCACGTTCTCCTTaGCAGCCAGGAAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGGPRSP*QPGSGQ
Trigger: CTGCCCGCTTCCTGGCTGCCAAGGAGAACGTGGTCC...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCCGGCCAGCTTCACTGTaGCATTCTCCGTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSRPASL*HSPWTG
Trigger: TCCTGTCCACGGAGAATGCCACAGTGAAGCTGGCCG...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGACCAGTAGCCCAGCATaGAACGCTCCGAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQTSSPA*NAPSSS
Trigger: GGAACTACTCGGAGCGTTCCATGCTGGGCTACTGGT...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGGGCTGCAGGCACACGTaGTATGGGTCTTGTTGGACT +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWGCRHT*YGSCWT
Trigger: AGTCCAACAAGACCCATACCACGTGTGCCTGCAGCC...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCATGCACAGGTTCTTGTaGATGGTGTTGCGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSMHRFL*MVLRSV
Trigger: GACCGACCGCAACACCATCCACAAGAACCTGTGCAT...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGGCAGGCCGGCGAAGATaGGGCAGGCAATCTCATACT +
Preference number: 4 (lower is better)
Translates to: VREGPWNCPLPSSESSGKAGRRR*GRQSHT
Trigger: AGTATGAGATTGCCTGCCCCATCTTCGCCGGCCTGC...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGAGCTGCGGTAGTCAATaGCAGCCGCGATGCCCACCA +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWSCGSQ*QPRCPP
Trigger: TGGTGGGCATCGCGGCTGCCATTGACTACCGCAGCT...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CTGTCCTGCCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAAGATGAAGACCCCCTaGAAGGCGTTGAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LSCLTAPSGCSRQHFWLRKMKTP*KALKVV
Trigger: CACCACCTTCAACGCCTTCCAGGGGGTCTTCATCTT...CCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAGCAGGTGGTTCCCCATaGTACCTCGGTTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGAGGSP*YLGSGW
Trigger: CCACCCTGAACCGAGGTACCATGGGGAACCACCTGC...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCGCTGCAGCACGGGGTTaGTCAGCAGGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGAAARG*SAGGSP
Trigger: TGGGGAACCACCTGCTGACCAACCCCGTGCTGCAGC...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGGCCCCCTGGCACAGGTaGCACAGGGGGCTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQAPWHR*HRGLRR
Trigger: CCGCCTGAGCCCCCTGTGCCACCTGTGCCAGGGGGC...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGATCGTCCAGATCGCTCTaGTACAGCACCGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGSSRSL*YSTDWA
Trigger: GGCCCAGTCGGTGCTGTACCAGAGCGATCTGGACGA...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGTCCAGTGGGGGCCTTTaGCAACCTCAGAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWSSGGL*QPQKLP
Trigger: GGGCAGCTTCTGAGGTTGCCAAAGGCCCCCACTGGA...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAAAGGGAGGGGGTCATTaGGTGCACTGGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGKGGGH*VHWEAE
Trigger: CTCTGCCTCCCAGTGCACCCAATGACCCCCTCCCTT...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGGAACTGCCCAAATATaGCCACCCCTGTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWGTAQI*PPLWAG
Trigger: CCCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCC...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GATGCACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCGCCGCAGGCTCCCGGTaGCTTCAAGTGATGAGATTT +
Preference number: 4 (lower is better)
Translates to: DARTRRSPGCQASSAALLAAGSR*LQVMRF
Trigger: AAATCTCATCACTTGAAGCCACCGGGAGCCTGCGGC...GAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGTGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCGACACATCCCGAGCCTaGAGCTTCCGGGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSDTSRA*SFRGLG
Trigger: TCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTC...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCTGTGCCTCAGCCCCCTaGAACTCTCCTGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGCASAP*NSPGPP
Trigger: AGGAGGGCCAGGAGAGTTCCAGGGGGCTGAGGCACA...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGCCCGGCGATGCCGGCTaGAACAGGACCCGATACACC +
Preference number: 4 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPPGDAG*NRTRYT
Trigger: GGTGTATCGGGTCCTGTTCCAGCCGGCATCGCCGGG...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGACCGTCCCAGCTGGGGTaGGGGCGTCAAGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGPSQLG*GRQGTR
Trigger: CCTGGTGCCTTGACGCCCCCACCCCAGCTGGGACGG...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGCTGTACCGTCCCAGCTaGGGTGGGGGCGTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPLYRPS*GGGVKA
Trigger: TGCCTTGACGCCCCCACCCCAGCTGGGACGGTACAG...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCAGTCAACGGAGGAGATaGACTGGTAGGGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSSQRRR*TGRGWG
Trigger: TCCCCAACCCCTACCAGTTCATCTCCTCCGTTGACT...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGTGCGGCTGTTCTGCTTaGTGGTTTTGGCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGCGCSA*WFWQTA
Trigger: AGCTGTCTGCCAAAACCATCAAGCAGAACAGCCGCA...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGTGCGGCTGTTCTGCTTaGTGGTTTTGGCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWCGCSA*WFWQTA
Trigger: AGCTGTCTGCCAAAACCATCAAGCAGAACAGCCGCA...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAACAGCAGCAGCTCGTTaGTGCGGCCCTGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGTAAAR*CGPGRS
Trigger: AGATCTACCAGGGCCGCATCAACGAGCTGCTGCTGT...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGCAGCCAGGAAGAGGTTaGTGCACAGGTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGQPGRG*CTGSCG
Trigger: TCCACAAGAACCTGTGCATCAACCTCTTCCTGGCTG...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGCAGGCAATCTCATACTaGGTCTTGTCGATCCCGACC +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWQAISY*VLSIPT
Trigger: GGTCGGGATCGACAAGACTCAGTATGAGATTGCCTG...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGCAGGCAATCTCATACTaGGTCTTGTCGATCCCGACC +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGQAISY*VLSIPT
Trigger: GGTCGGGATCGACAAGACTCAGTATGAGATTGCCTG...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCAAGCATCTTTGGGTGTaGAGAGGTCTCCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSKHLWV*RGLPRA
Trigger: GGCCCGGGGGAGACCTCTTCACACCCAAAGATGCTT...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCCAGTCAGTGTGTCCGTaGGGTAGGGGATCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGQSVCP*GRGSRA
Trigger: TGCCCTGGATCCCCTACCGCACGGACACACTGACTG...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGAGACCACAAAGCCTGTaGCATCCACGCGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWRPQSL*HPRGWA
Trigger: TGCCCAACCGCGTGGATGGCACAGGCTTTGTGGTCT...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCCATGAAGGCGTTGGATaGCGAGCGCTTGTCGTAACC +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSHEGVG*RALVVT
Trigger: GGTTACGACAAGCGCTCGGCATCCAACGCCTTCATG...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGCATGAAGGCGTTGGATaGCGAGCGCTTGTCGTAACC +
Preference number: 4 (lower is better)
Translates to: VREGPWNCPLPSSESSGKHEGVG*RALVVT
Trigger: GGTTACGACAAGCGCTCGGCATCCAACGCCTTCATG...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGTGCGTGGTGAGGGGTaGCCGGCGGAGCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTVRGEG*PAERGG
Trigger: ACCACCCCGCTCCGCCGGGCACCCCTCACCACGCAC...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCTCCACCAGCATGCCCTaGTGGGTGGCCGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPSTSMP*WVAGHW
Trigger: CCAGTGGCCGGCCACCCAGCAGGGCATGCTGGTGGA...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGAGGATGTCCAGCAGCTaGTCCATCAGCTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQRMSSS*SISFTE
Trigger: CTCTGTGAAGCTGATGGAGCAGCTGCTGGACATCCT...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGTCTTGTTGTAGTTCTTaGCGGCTGACTCGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQSCCSS*RLTRAR
Trigger: TCGAGCGCGAGTCAGCCGGCAAGAACTACAACAAGA...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCGTGGCCGTGTGCACCTaGTCCGTGGCATTCATGTCC +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSVAVCT*SVAFMS
Trigger: GGACATGAATGCCACGGAGCAGGTGCACACGGCCAC...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCTCTCGGTGCCGTAGCTaGGGTAGTCAATGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVSRCRS*GSQWQP
Trigger: CGGCTGCCATTGACTACCGCAGCTACGGCACCGAGA...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAAGCAGGCCTTCTCGGTaGCGTAGCTGCGGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGSRPSR*RSCGSQ
Trigger: TTGACTACCGCAGCTACGGCACCGAGAAGGCCTGCT...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGCTTCGGATCATCTTGTaGAGGGTCACCATGAGGAAC +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGLRIIL*RVTMRN
Trigger: GTTCCTCATGGTGACCCTGCACAAGATGATCCGAAG...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGTGTAGTAGCGGGTGTTaGTTCGCATGGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWCSSGC*FAWLRS
Trigger: AGACCTCAGCCATGCGAAGCAACACCCGCTACTACA...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGGGGCAGGGTGTCCATaGCACAGGCTTCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMGAGCP*HRLPGL
Trigger: GAGGCCGGGAAGCCTGTGGCATGGACACCCTGCCCC...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGCGCCGTCCTCGGCCGTaGAGCTCTCCGACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMRRPRP*SSPTRP
Trigger: TGGACGAGTCGGAGAGCTGCACGGCCGAGGACGGCG...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCTGGGCCCCTCAGGGCTaGTGTCCGGGTAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPWAPQG*CPGRRV
Trigger: CACCCTCCTACCCGGACAGCAGCCCTGAGGGGCCCA...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCCCCTGGTCCATGAGGTaGCCTCAGAGACTGGTGACC +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSPWSMR*PQRLVT
Trigger: GGTCACCAGTCTCTGAGGGCACCTCATGGACCAGGG...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGAGTCTGGAAGTGGGCTaGACCCTTCCAAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: VREGPWNCPLPSSESSGKSLEVG*TLPSSP
Trigger: GGGAGAACTTGGAAGGGTGCAGCCCACTTCCAGACT...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTGTGGGCTGGGGGCCCTaGGGGGAGTTGTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCVGWGP*GELCFI
Trigger: GATGAAGCACAACTCCCCGCAGGGCCCCCAGCCCAC...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGACCAGCAGCGCTGCTCTaGTCCGGAGAAAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGPAALL*SGESPG
Trigger: GCCCGGGCTTTCTCCGGAGCAGAGCAGCGCTGCTGG...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGTGGCTTCGTCTTCCCTaGGGGAAGGTGGAGGATAGG +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWWLRLP*GKVEDR
Trigger: CCTATCCTCCACCTTCCCGCAGGGAAGACGAAGCCA...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAGCAGGCACCACGGCCTaGACCACCAGCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGAGTTA*TTSLSS
Trigger: GCTGGACAGGCTGGTGGTCCAGGCCGTGGTGCCTGC...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGCACCATGCGCCAGACTaGTGCTCTGACTCGTGTGTC +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWHHAPD*CSDSCV
Trigger: GACACACGAGTCAGAGCACCAGTCTGGCGCATGGTG...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTCGCAGGGCCTGCAGCTaGGCATCCAGGATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCRRACS*ASRMSS
Trigger: GCTGGACATCCTGGATGCCCAGCTGCAGGCCCTGCG...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGACTGACTCGCGCTCGATaGGCCGCAGGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGLTRAR*AAGPAA
Trigger: AGCTGCAGGCCCTGCGGCCCATCGAGCGCGAGTCAG...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGACGGCCAGCTTCACTGTaGCATTCTCCGTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGRPASL*HSPWTG
Trigger: TCCTGTCCACGGAGAATGCCACAGTGAAGCTGGCCG...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAGCGAAGTTGGTGAGGTaGCTGCAGGCACACGTGGTA +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGAKLVR*LQAHVV
Trigger: TACCACGTGTGCCTGCAGCCACCTCACCAACTTCGC...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCCCAGGTAGTAGTACTTaGTGCGGGAATACTCGCTCT +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSPGSST*CGNTRS
Trigger: AGAGCGAGTATTCCCGCACCAAGTACTACTACCTGG...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCAGCTGCGGTAGTCAATaGCAGCCGCGATGCCCACCA +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSSCGSQ*QPRCPP
Trigger: TGGTGGGCATCGCGGCTGCCATTGACTACCGCAGCT...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGAAGATGAAGACCCCCTaGAAGGCGTTGAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQKMKTP*KALKVV
Trigger: CACCACCTTCAACGCCTTCCAGGGGGTCTTCATCTT...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCGCAGGTGGTTCCCCATaGTACCTCGGTTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSAGGSP*YLGSGW
Trigger: CCACCCTGAACCGAGGTACCATGGGGAACCACCTGC...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCGGGTTGGTCAGCAGGTaGTTCCCCATGGTACCTCGG +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVGLVSR*FPMVPR
Trigger: CCGAGGTACCATGGGGAACCACCTGCTGACCAACCC...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCTTCCCGGTAGCTCCCTaGGGAGTTGAAGACAGGGGG +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVFPVAP*GVEDRG
Trigger: CCCCCTGTCTTCAACTCCCCAGGGAGCTACCGGGAA...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCTTCCCGGTAGCTCCCTaGGGAGTTGAAGACAGGGGG +
Preference number: 4 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGFPVAP*GVEDRG
Trigger: CCCCCTGTCTTCAACTCCCCAGGGAGCTACCGGGAA...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCCCTGGCACAGGTaGCACAGGGGGCTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTAPWHR*HRGLRR
Trigger: CCGCCTGAGCCCCCTGTGCCACCTGTGCCAGGGGGC...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCTCGTCCAGATCGCTCTaGTACAGCACCGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSSSRSL*YSTDWA
Trigger: GGCCCAGTCGGTGCTGTACCAGAGCGATCTGGACGA...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTGTGAGTCCCGCAGGTTaGCCCCGCTGGCATAGAGGG +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCVSPAG*PRWHRG
Trigger: CCCTCTATGCCAGCGGGGCCAACCTGCGGGACTCAC...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCACAGGTTCCATCCAGTaGGGGCCTTTGGCAACCTCA +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSTGSIQ*GPLATS
Trigger: TGAGGTTGCCAAAGGCCCCCACTGGATGGAACCTGT...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCGGAACTGCCCAAATATaGCCACCCCTGTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGGTAQI*PPLWAG
Trigger: CCCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCC...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGACCGAGCCCACAGGACTaGGAACTGCCCAAATATGGC +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGPSPQD*ELPKYG
Trigger: GCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGG...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGTGGAGGGGCCACCTCTaGGGAAACGGCAATGCAGGG +
Preference number: 4 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPWRGHL*GNGNAG
Trigger: CCCTGCATTGCCGTTTCCCCAGAGGTGGCCCCTCCA...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGTCCTGGCCCTCCTCCTaGTGTCGGGGGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMSWPSS*CRGQPQ
Trigger: CTGTGGCTGCCCCCGACACCAGGAGGAGGGCCAGGA...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCGGGGCGGCTTTGCACTaGACTGCAGTGATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSGAALH*TAVMSS
Trigger: GCTGGACATCACTGCAGTCCAGTGCAAAGCCGCCCC...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTGGGACACCTGGGCTCTaGGGGCGGCTTTGCACTGGA +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCGTPGL*GRLCTG
Trigger: TCCAGTGCAAAGCCGCCCCCAGAGCCCAGGTGTCCC...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCAGGTCTGGTTAGGTTaGGGGGACACCTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVQVWLG*GDTWAL
Trigger: CAGAGCCCAGGTGTCCCCCCAACCTAACCAGACCTG...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
3UTR CAA 72 bp TCAAAGGGACAGCGCAGCCATCTTGACAAAGCATCTTaGGGTGTGAAGAGGTCTCCCCCGGGCCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: SKGQRSHLDKAS*GVKRSPPGRWG
Trigger: TCCCCACCGGCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCCCTTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGTCCGTAGGTCATACTTaGCGATGTTGCGCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWSVGHT*RCCACA
Trigger: AGCGCACGCGCAACATCGTCAAGTATGACCTACGGA...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGGTTGGCATTGGTGTTaGAGGCATAGTCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWGWHWC*RHSPRG
Trigger: ACCGCGTGGACTATGCCTTCAACACCAATGCCAACC...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTGCACAGCGAAGTTGGTaGGGTGGCTGCAGGCACACG +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCAQRSW*GGCRHT
Trigger: CGTGTGCCTGCAGCCACCTCACCAACTTCGCTGTGC...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGTTCTGTAAGGCGCAGTaGAAGACGAAGATGAAGACC +
Preference number: 4 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPEFCKAQ*KTKMKT
Trigger: GGTCTTCATCTTCGTCTTTCACTGCGCCTTACAGAA...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAGGGGCGAGGAGGGATTaGAGCCCACTGACTCGGCGA +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGGARRD*SPLTRR
Trigger: TCGCCGAGTCAGTGGGCTTCAATCCCTCCTCGCCCC...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGTCCGGGTAGGAGGGTaGGTCCCGCAGGTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTVRVGG*VPQVGP
Trigger: GGGGCCAACCTGCGGGACTCACCCTCCTACCCGGAC...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGAACTCATGGCACTTGTaGGAAAAGGAGGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWNSWHL*EKEGQR
Trigger: TCTCTGCCCCTCCTTTTCTCACAAGTGCCATGAGTT...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGAAATCTTGTCGTCCGTaGGCCCGTAGTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWKSCRP*ARSWHS
Trigger: AGAATGCCAACTACGGGCGCACGGACGACAAGATTT...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCCCACCACGCACTGGGTaGGGTTGTTACACCTCTGTG +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSPPRTG*GCYTSV
Trigger: CACAGAGGTGTAACAACCGCACCCAGTGCGTGGTGG...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTATGCGGTCACCCGCCTaGAGCGGGTCCTTGCACCAT +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCMRSPA*SGSLHH
Trigger: ATGGTGCAAGGACCCGCTGCAGGCGGGTGACCGCAT...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTAGGGCATCACGTAGATaGGGTCACCCGCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCRASRR*GHPPAA
Trigger: CGCTGCAGGCGGGTGACCGCATCTACGTGATGCCCT...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCAACCCGTCTCCCACGTaGCCTCAAAGCGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVNPSPT*PQSAVC
Trigger: ACACACTGCGCTTTGAGGGCACGTGGGAGACGGGTT...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGAGCGGGGTGGTGGCTaGGGGCGAGGCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTERGGG*GRGCAG
Trigger: ACCAGCACAGCCTCGCCCGCAGCCACCACCCCGCTC...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGATGGCACCCACTGGGTaGGTGGTGAGGGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQMAPTG*VVRGAR
Trigger: CCGGGCACCCCTCACCACGCACCCAGTGGGTGCCAT...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGGAACACCAGCTCCTaGACCTGGCCCTCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPGNTSS*TWPSVF
Trigger: GAACACAGAGGGCCAGGTGCAGGAGCTGGTGTTCCC...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGTGTTGCGGTCGGTCTaGAGCCCCCGCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMVLRSV*SPRRKQ
Trigger: CTGCTTCCTGCGGGGGCTGCAGACCGACCGCAACAC...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGAGTGACGCAGGCACTTaGTGTACTCCTTGTGCACCT +
Preference number: 4 (lower is better)
Translates to: VREGPWNCPLPSSESSGKSDAGT*CTPCAP
Trigger: AGGTGCACAAGGAGTACAGCAAGTGCCTGCGTCACT...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGACCCCGCAGGTTGTTGTaGACCAGCTCTGAGATGATC +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGPRRLL*TSSEMI
Trigger: GATCATCTCAGAGCTGGTGCACAACAACCTGCGGGG...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGACTCAAGGCCTGGGGCTaGCAGGTAGCCCTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGLKAWG*QVALVA
Trigger: AGCCACGAGGGCTACCTGGCAGCCCCAGGCCTTGAG...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAGTGACCAGCTGCATCTaGCCGTCCCCATCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGVTSCI*PSPSGP
Trigger: AGGGCCCGATGGGGACGGGCAGATGCAGCTGGTCAC...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGAGTCTGGAAGTGGGCTaGACCCTTCCAAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWSLEVG*TLPSSP
Trigger: GGGAGAACTTGGAAGGGTGCAGCCCACTTCCAGACT...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGACCAGTCCCCCTGCCCTaGGGCCTTTTCCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGPVPLP*GLFPVS
Trigger: GGAGACTGGGAAAAGGCCGCAGGGCAGGGGGACTGG...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGACCGCCCAGTCCCCCTaGCCTGCGGCCTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQTAQSP*PAAFSQ
Trigger: CTGGGAAAAGGCCGCAGGGCAGGGGGACTGGGCGGT...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCGGGGGCAGGTTTGCTTaGGGGGCAGGGACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPGGRFA*GAGTKS
Trigger: GCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCC...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTCAGAGGGGGCAGGTTTaGTTGCGGGGCAGGGACCAA +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCQRGQV*LRGRDQ
Trigger: TTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTG...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCGTGGGCTGGGGGCCCTaGGGGGAGTTGTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPVGWGP*GELCFI
Trigger: GATGAAGCACAACTCCCCGCAGGGCCCCCAGCCCAC...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAGTGGGCTGGGGGCCCTaGGGGGAGTTGTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGVGWGP*GELCFI
Trigger: GATGAAGCACAACTCCCCGCAGGGCCCCCAGCCCAC...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGCACAGGACTGGGAACTaGCCAAATATGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWHRTGN*PNMATP
Trigger: AGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTG...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGCGGAGAAGTCCTGGCTaGCAGGCCAGCAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMRRSPG*QASSAA
Trigger: AGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCG...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGTGGATTGTAAAAAGCTaGTCTGGCGGCCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPWIVKS*SGGPPA
Trigger: GGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCA...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGCCTCAGCCATACCCATaGCCTCCACAACCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPPQPYP*PPQPQC
Trigger: GCACTGGGGTTGTGGAGGGCATGGGTATGGCTGAGG...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCTGGCTTCGTCTTCCCTaGGGGAAGGTGGAGGATAGG +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSWLRLP*GKVEDR
Trigger: CCTATCCTCCACCTTCCCGCAGGGAAGACGAAGCCA...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGCATGGAACTGTCCCTTaGCCTCCTCAGAGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWHGTVP*PPQSRL
Trigger: CAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATG...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCGGCTCAGGCCTTaGGTGGCCGAGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTARLRP*VAEVTR
Trigger: CCTGGTCACCTCGGCCACCCAAGGCCTGAGCCGGGC...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGACTTCTGCAGGGTCCCTaGGCACACGAAGACTTTCTG +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGLLQGP*AHEDFL
Trigger: CAGAAAGTCTTCGTGTGCCCAGGGACCCTGCAGAAG...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCACTCGTGTGTCGAGGTaGGCTCCAGCACCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVTRVSR*APAPSA
Trigger: TGCAGAAGGTGCTGGAGCCCACCTCGACACACGAGT...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGTGCCATCCACGCGGTTaGGCAGGCGGTAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMCHPRG*AGGRWW
Trigger: CCACCACCTACCGCCTGCCCAACCGCGTGGATGGCA...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTGTTGATGGCACCCACTaGGTGCGTGGTGAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCVDGTH*VRGEGC
Trigger: GCACCCCTCACCACGCACCCAGTGGGTGCCATCAAC...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCAGATCAGGTCCCAGCTaGTTGATGGCACCCACTGGG +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSRSGPS*LMAPTG
Trigger: CCCAGTGGGTGCCATCAACCAGCTGGGACCTGATCT...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCAGATCAGGTCCCAGCTaGTTGATGGCACCCACTGGG +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVRSGPS*LMAPTG
Trigger: CCCAGTGGGTGCCATCAACCAGCTGGGACCTGATCT...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGTGGGTGGCCGGCCACTaGACCCGCCGTACCTCTCGG +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPWVAGH*TRRTSR
Trigger: CCGAGAGGTACGGCGGGTCCAGTGGCCGGCCACCCA...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTGCTCGCTGGCGATGTTaGCCGCGTTCTCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCARWRC*PRSPHS
Trigger: AGAGTGGGGAGAACGCGGCCAACATCGCCAGCGAGC...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCGTCGGGCCAGCTCGCTaGCGATGTTGGCCGCGTTCT +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPVGPAR*RCWPRS
Trigger: AGAACGCGGCCAACATCGCCAGCGAGCTGGCCCGAC...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGCAGTTAGCATTGAAGTaGTTCTTGTCCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGQLALK*FLSSRW
Trigger: CCACCTGGAGGACAAGAACCACTTCAATGCTAACTG...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAGGCTGCAGGCACACGTaGTATGGGTCTTGTTGGACT +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGGCRHT*YGSCWT
Trigger: AGTCCAACAAGACCCATACCACGTGTGCCTGCAGCC...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCGCGAAGTTGGTGAGGTaGCTGCAGGCACACGTGGTA +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSAKLVR*LQAHVV
Trigger: TACCACGTGTGCCTGCAGCCACCTCACCAACTTCGC...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCGCAGGCCGGCGAAGATaGGGCAGGCAATCTCATACT +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVAGRRR*GRQSHT
Trigger: AGTATGAGATTGCCTGCCCCATCTTCGCCGGCCTGC...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTCTCCCAAGGGGTGCTTaGGTTCCCGGTAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCLPRGA*VPGSSL
Trigger: CAGGGAGCTACCGGGAACCCAAGCACCCCTTGGGAG...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCGTGAGTCCCGCAGGTTaGCCCCGCTGGCATAGAGGG +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPVSPAG*PRWHRG
Trigger: CCCTCTATGCCAGCGGGGCCAACCTGCGGGACTCAC...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCCCGGGCCACCAGGGCTaGCGGGCGCGAGGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTPGHQG*RARGVV
Trigger: TACTACACCTCGCGCCCGCCAGCCCTGGTGGCCCGG...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGGGAGAGTCTGGAAGTaGGCTGCACCCTTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWGRVWK*AAPFQV
Trigger: AACTTGGAAGGGTGCAGCCCACTTCCAGACTCTCCC...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCCGCCCCGGCGGGGACTaGGGATGCACGTACACGGAG +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTRPGGD*GCTYTE
Trigger: CTCCGTGTACGTGCATCCCCAGTCCCCGCCGGGGCG...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGACCCAACAAAGTTCATaGCAGCAGCAGGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: VREGPWNCPLPSSESSGKTQQSS*QQQAET
Trigger: GGTCTCAGCCTGCTGCTGCCATGAACTTTGTTGGGT...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGACAAACCACCATCTTTaGTCTGACCCCTTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGTNHHL*SDPFSP
Trigger: AGGGGAGAAGGGGTCAGACCAAAGATGGTGGTTTGT...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGGCAGGGAGGAAGTTaGCCTCTCTGTGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPGQGGS*PLCVPQ
Trigger: CTGAGGCACACAGAGAGGCCAACTTCCTCCCTGCCC...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCGCCAGACTGGTGCTCTaGCTCGTGTGTCGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPARLVL*LVCRGG
Trigger: CCCACCTCGACACACGAGTCAGAGCACCAGTCTGGC...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCTCCGTAGGTCATACTTaGCGATGTTGCGCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGSVGHT*RCCACA
Trigger: AGCGCACGCGCAACATCGTCAAGTATGACCTACGGA...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGCCGTCTCCCCGCTCTTaGTGCGCGTCCGTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMPSPRS*CASVGH
Trigger: ATGACCTACGGACGCGCATCAAGAGCGGGGAGACGG...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAGGACCCCACACACCATaGAGGCGTTGGATGCCGAGC +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGGPHTP*RRWMPS
Trigger: GCTCGGCATCCAACGCCTTCATGGTGTGTGGGGTCC...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCAGTCAACGGAGGAGATaGACTGGTAGGGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSSQRRR*TGRGWG
Trigger: TCCCCAACCCCTACCAGTTCATCTCCTCCGTTGACT...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGTCTCCACCACGGCCTTaGTATAATCCTTACAAGTTC +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGSPPRP*YNPYKF
Trigger: GAACTTGTAAGGATTATATCAAGGCCGTGGTGGAGA...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCCTGTGTTCAGGACTGTaGCCTCCAGGACCACGTTCT +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSLCSGL*PPGPRS
Trigger: AGAACGTGGTCCTGGAGGTCACAGTCCTGAACACAG...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGACAGGCAATCTCATACTaGGTCTTGTCGATCCCGACC +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGQAISY*VLSIPT
Trigger: GGTCGGGATCGACAAGACTCAGTATGAGATTGCCTG...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGGGCTTGAGCACAGATaGGCTTCGGATCATCTTGTG +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWGLEHR*ASDHLV
Trigger: CACAAGATGATCCGAAGCTCATCTGTGCTCAAGCCC...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTCCACTGACTCGGCGATaGGGGTGTTGTAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCPLTRR*GCCRDW
Trigger: CCAGTCCCTACAACACCCTCATCGCCGAGTCAGTGG...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCGTTGTGCACCAGCTCTaGGATGATCATCTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSVVHQL*DDHLLK
Trigger: TTTGAGAAGATGATCATCTCAGAGCTGGTGCACAAC...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGGGAAACCCTGTCTGTaGACCCTGGCACCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMGKPCL*TLAPQA
Trigger: GGCCTGAGGTGCCAGGGTTCACAGACAGGGTTTCCC...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGAGACCCGAAGATGTTTaGAAACTCATGGCACTTGTG +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGRPEDV*KLMALV
Trigger: CACAAGTGCCATGAGTTTTCAAACATCTTCGGGTCT...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGACCTGCAGCGGGTCCTTaGACCATGCGCCAGACTGGT +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGPAAGP*TMRQTG
Trigger: ACCAGTCTGGCGCATGGTGCAAGGACCCGCTGCAGG...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCATGCGGTCACCCGCCTaGAGCGGGTCCTTGCACCAT +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPMRSPA*SGSLHH
Trigger: ATGGTGCAAGGACCCGCTGCAGGCGGGTGACCGCAT...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTCAGTCAGTGTGTCCGTaGGGTAGGGGATCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCQSVCP*GRGSRA
Trigger: TGCCCTGGATCCCCTACCGCACGGACACACTGACTG...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTCATAGTCCACGCGGTTaGCAGCCGCCTCGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCHSPRG*QPPRCH
Trigger: ATGACAGCGAGGCGGCTGGCAACCGCGTGGACTATG...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGAGGATGTCCAGCAGCTaGTCCATCAGCTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWRMSSS*SISFTE
Trigger: CTCTGTGAAGCTGATGGAGCAGCTGCTGGACATCCT...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGTCTTGTTGTAGTTCTTaGCGGCTGACTCGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWSCCSS*RLTRAR
Trigger: TCGAGCGCGAGTCAGCCGGCAAGAACTACAACAAGA...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGGTGTTGCGGTCGGTCTaGAGCCCCCGCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQVLRSV*SPRRKQ
Trigger: CTGCTTCCTGCGGGGGCTGCAGACCGACCGCAACAC...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGTTGCTGTACTCCTTGTaGACCTTCTTCTGTAAGGCG +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWLLYSL*TFFCKA
Trigger: CGCCTTACAGAAGAAGGTGCACAAGGAGTACAGCAA...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGAGTGACGCAGGCACTTaGTGTACTCCTTGTGCACCT +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWSDAGT*CTPCAP
Trigger: AGGTGCACAAGGAGTACAGCAAGTGCCTGCGTCACT...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCCGGGTGGGGAGCGGATaGAGCAGTAGGAGTGACGCA +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPRVGSG*SSRSDA
Trigger: TGCGTCACTCCTACTGCTGCATCCGCTCCCCACCCG...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGTGTAGTAGCGGGTGTTaGTTCGCATGGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWCSSGC*FAWLRS
Trigger: AGACCTCAGCCATGCGAAGCAACACCCGCTACTACA...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCTGTTGTAGGGACTGGTaGCCCCACGGGGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPCCRDW*PHGAAA
Trigger: TGCTGCAGCCCCGTGGGGGCACCAGTCCCTACAACA...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGCCTTGGCCGCGCTGCTaGTCCCCCGCAGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQPWPRC*SPAGCC
Trigger: ACAACAACCTGCGGGGGAGCAGCAGCGCGGCCAAGG...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGTGGGCCCCTCAGGGCTaGTGTCCGGGTAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPWAPQG*CPGRRV
Trigger: CACCCTCCTACCCGGACAGCAGCCCTGAGGGGCCCA...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTACTGCTCCCTCTGGGTaGAGCCGGCAGCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCTAPSG*SRQHFW
Trigger: CCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGT...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCACAGGACTGGGAACTaGCCAAATATGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVHRTGN*PNMATP
Trigger: AGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTG...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAGTTGATGGCACCCACTaGGTGCGTGGTGAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGVDGTH*VRGEGC
Trigger: GCACCCCTCACCACGCACCCAGTGGGTGCCATCAAC...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCGTTGATGGCACCCACTaGGTGCGTGGTGAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPVDGTH*VRGEGC
Trigger: GCACCCCTCACCACGCACCCAGTGGGTGCCATCAAC...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGAGATCAGGTCCCAGCTaGTTGATGGCACCCACTGGG +
Preference number: 4 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPRSGPS*LMAPTG
Trigger: CCCAGTGGGTGCCATCAACCAGCTGGGACCTGATCT...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAGACTGGGGCTGTGGCTaGAGGCAGATCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGDWGCG*RQIRSQ
Trigger: CTGGGACCTGATCTGCCTCCAGCCACAGCCCCAGTC...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGACTGGGGCTGTGGCTaGAGGCAGATCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMDWGCG*RQIRSQ
Trigger: CTGGGACCTGATCTGCCTCCAGCCACAGCCCCAGTC...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGACCAGCATGCCCTGCTaGGTGGCCGGCCACTGGACC +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPTSMPC*VAGHWT
Trigger: GGTCCAGTGGCCGGCCACCCAGCAGGGCATGCTGGT...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCTTCCTCGAGTCCCCTTaGGGCAGGGCCTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPFLESP*GRASPP
Trigger: TGGTGGAGAGGCCCTGCCCCAAGGGGACTCGAGGAA...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGTTCCTCGAGTCCCCTTaGGGCAGGGCCTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMFLESP*GRASPP
Trigger: TGGTGGAGAGGCCCTGCCCCAAGGGGACTCGAGGAA...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCGGACCACGTTCTCCTTaGCAGCCAGGAAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPGPRSP*QPGSGQ
Trigger: CTGCCCGCTTCCTGGCTGCCAAGGAGAACGTGGTCC...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCCTCGGGTACTCCTCCTaGGGGAACACCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPLGYSS*GNTSSC
Trigger: GCAGGAGCTGGTGTTCCCCCAGGAGGAGTACCCGAG...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGACAGGTGCTCAGGACACATCCCGAGCCTGGAGCTTCCGGGGTCTGGGATTTGGTTTTGGCAGACAGCTaGATGGAGTTCTTTCTCGGG +
Preference number: 4 (lower is better)
Translates to: GQVLRTHPEPGASGVWDLVLADS*MEFFLG
Trigger: CCCGAGAAAGAACTCCATCCAGCTGTCTGCCAAAAC...CAAATCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTCCTGAGCACCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCCAGGCACACGTGGTATaGGTCTTGTTGGACTCCACC +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSQAHVV*VLLDST
Trigger: GGTGGAGTCCAACAAGACCCATACCACGTGTGCCTG...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGATGCACAGGTTCTTGTaGATGGTGTTGCGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWMHRFL*MVLRSV
Trigger: GACCGACCGCAACACCATCCACAAGAACCTGTGCAT...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGGATAACGAAGGAGACTaGCCCGATGAAACTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWDNEGD*PDETPD
Trigger: ATCTGGAGTTTCATCGGGCCAGTCTCCTTCGTTATC...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTGCAGGTGGTTCCCCATaGTACCTCGGTTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCAGGSP*YLGSGW
Trigger: CCACCCTGAACCGAGGTACCATGGGGAACCACCTGC...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTGGGTTGGTCAGCAGGTaGTTCCCCATGGTACCTCGG +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCGLVSR*FPMVPR
Trigger: CCGAGGTACCATGGGGAACCACCTGCTGACCAACCC...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGGGGTGTTGTAGGGACTaGTGCCCCCACGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQGCCRD*CPHGAA
Trigger: TGCAGCCCCGTGGGGGCACCAGTCCCTACAACACCC...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCCTCCCAAGGGGTGCTTaGGTTCCCGGTAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPLPRGA*VPGSSL
Trigger: CAGGGAGCTACCGGGAACCCAAGCACCCCTTGGGAG...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTTCGTCCAGATCGCTCTaGTACAGCACCGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCSSRSL*YSTDWA
Trigger: GGCCCAGTCGGTGCTGTACCAGAGCGATCTGGACGA...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGTGGCTGAGGGGCACCTaGAGAGAGTGGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQWLRGT*REWPTS
Trigger: GCTGGTGGGCCACTCTCTCCAGGTGCCCCTCAGCCA...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCGGTCATTGGGTGCACTaGGAGGCAGAGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPGHWVH*EAEGAG
Trigger: ACCTGCCCCCTCTGCCTCCCAGTGCACCCAATGACC...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTAAGGGAGGGGGTCATTaGGTGCACTGGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCKGGGH*VHWEAE
Trigger: CTCTGCCTCCCAGTGCACCCAATGACCCCCTCCCTT...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCGTGCCAGGAAGGAAATaGGTTCTTTGTTTCGCTGTT +
Preference number: 4 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSVPGRK*VLCFAV
Trigger: AACAGCGAAACAAAGAACCCATTTCCTTCCTGGCAC...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGGTGCCAGGAAGGAAATaGGTTCTTTGTTTCGCTGTT +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGVPGRK*VLCFAV
Trigger: AACAGCGAAACAAAGAACCCATTTCCTTCCTGGCAC...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGCCGGGGTCTGGGATTTaGGGTCAAGCCGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMPGSGI*GQAAQN
Trigger: GTTCTGGGCGGCTTGACCCCAAATCCCAGACCCCGG...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAGACACATCCCGAGCCTaGAGCTTCCGGGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGDTSRA*SFRGLG
Trigger: TCCCAGACCCCGGAAGCTCCAGGCTCGGGATGTGTC...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAACCCAACAAAGTTCATaGCAGCAGCAGGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGTQQSS*QQQAET
Trigger: GGTCTCAGCCTGCTGCTGCCATGAACTTTGTTGGGT...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCACAAACCACCATCTTTaGTCTGACCCCTTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSTNHHL*SDPFSP
Trigger: AGGGGAGAAGGGGTCAGACCAAAGATGGTGGTTTGT...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGAGAAAAAGCCAGAGTTaGAACCCAACCCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGRKSQS*NPTPPL
Trigger: AAGAGGTGGGGTTGGGTTCCAACTCTGGCTTTTTCT...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGTCTAGACTTCACCCATaGTCTTCTGGTGTAATGGGT +
Preference number: 4 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGSRLHP*SSGVMG
Trigger: ACCCATTACACCAGAAGACCATGGGTGAAGTCTAGA...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGCTCCTCAGAGTCGTCTaGCAAGACTGTCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPLLRVV*QDCPWP
Trigger: AGGCCAGGGACAGTCTTGCCAGACGACTCTGAGGAG...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGTCCGGGAAGGGCCATaGAACTGTCCCTTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMVREGP*NCPLPS
Trigger: GGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGTGTGCCTCAGCCCCCTaGAACTCTCCTGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMCASAP*NSPGPP
Trigger: AGGAGGGCCAGGAGAGTTCCAGGGGGCTGAGGCACA...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCGTTGTTACACCTCTGTaGCATGATCTTGAAGGCGTC +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSVVTPL*HDLEGV
Trigger: GACGCCTTCAAGATCATGTCACAGAGGTGTAACAAC...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGCCGTCTCCCCGCTCTTaGTGCGCGTCCGTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQPSPRS*CASVGH
Trigger: ATGACCTACGGACGCGCATCAAGAGCGGGGAGACGG...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGTCTCCACCACGGCCTTaGTATAATCCTTACAAGTTC +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQSPPRP*YNPYKF
Trigger: GAACTTGTAAGGATTATATCAAGGCCGTGGTGGAGA...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGTCTCCACCACGGCCTTaGTATAATCCTTACAAGTTC +
Preference number: 4 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWSPPRP*YNPYKF
Trigger: GAACTTGTAAGGATTATATCAAGGCCGTGGTGGAGA...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCAGCCAGGAAGAGGTTaGTGCACAGGTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVQPGRG*CTGSCG
Trigger: TCCACAAGAACCTGTGCATCAACCTCTTCCTGGCTG...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCCAGCCAGGAAGAGGTTaGTGCACAGGTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSQPGRG*CTGSCG
Trigger: TCCACAAGAACCTGTGCATCAACCTCTTCCTGGCTG...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCCAGGCAATCTCATACTaGGTCTTGTCGATCCCGACC +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSQAISY*VLSIPT
Trigger: GGTCGGGATCGACAAGACTCAGTATGAGATTGCCTG...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCGGGCTTGAGCACAGATaGGCTTCGGATCATCTTGTG +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSGLEHR*ASDHLV
Trigger: CACAAGATGATCCGAAGCTCATCTGTGCTCAAGCCC...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAGGCTGGAGTCGGGCTTaGGCACAGATGAGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGGWSRA*AQMSFG
Trigger: TCCGAAGCTCATCTGTGCTCAAGCCCGACTCCAGCC...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCCCACTGACTCGGCGATaGGGGTGTTGTAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPPLTRR*GCCRDW
Trigger: CCAGTCCCTACAACACCCTCATCGCCGAGTCAGTGG...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGGGGCGAGGAGGGATTaGAGCCCACTGACTCGGCGA +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTGARRD*SPLTRR
Trigger: TCGCCGAGTCAGTGGGCTTCAATCCCTCCTCGCCCC...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGAGGAGTAACTGTTATTaGAGTTGCCGTTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: VREGPWNCPLPSSESSGKRSNCY*SCRSGA
Trigger: TGCCCCTGAACGGCAACTTCAATAACAGTTACTCCT...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGTTGTGCACCAGCTCTaGGATGATCATCTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: PLPCGLFPVSREQGITAQVVHQL*DDHLLK
Trigger: TTTGAGAAGATGATCATCTCAGAGCTGGTGCACAAC...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGCAGGTTAGAGTCCCCTaGGGGGACTGTAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMQVRVP*GDCRAH
Trigger: ATGGGCCCTACAGTCCCCTCAGGGGACTCTAACCTG...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGAAGCATCTTTGGGTGTaGAGAGGTCTCCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMKHLWV*RGLPRA
Trigger: GGCCCGGGGGAGACCTCTTCACACCCAAAGATGCTT...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGCACCCTCTCTCCCTTTaGTTGTCCGAGTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPHPLSL*LSESGE
Trigger: CTCTCCAGACTCGGACAATCAAAGGGAGAGAGGGTG...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAAAATCTTGTCGTCCGTaGGCCCGTAGTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGKSCRP*ARSWHS
Trigger: AGAATGCCAACTACGGGCGCACGGACGACAAGATTT...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGCCTGCAGCGGGTCCTTaGACCATGCGCCAGACTGGT +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQPAAGP*TMRQTG
Trigger: ACCAGTCTGGCGCATGGTGCAAGGACCCGCTGCAGG...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGAGGGCATCACGTAGATaGGGTCACCCGCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQRASRR*GHPPAA
Trigger: CGCTGCAGGCGGGTGACCGCATCTACGTGATGCCCT...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTAGACCACAAAGCCTGTaGCATCCACGCGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCRPQSL*HPRGWA
Trigger: TGCCCAACCGCGTGGATGGCACAGGCTTTGTGGTCT...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTAACCCGTCTCCCACGTaGCCTCAAAGCGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCNPSPT*PQSAVC
Trigger: ACACACTGCGCTTTGAGGGCACGTGGGAGACGGGTT...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCAGGATGTCCAGCAGCTaGTCCATCAGCTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGRMSSS*SISFTE
Trigger: CTCTGTGAAGCTGATGGAGCAGCTGCTGGACATCCT...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCTCTTGTTGTAGTTCTTaGCGGCTGACTCGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVSCCSS*RLTRAR
Trigger: TCGAGCGCGAGTCAGCCGGCAAGAACTACAACAAGA...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCTCTTGTTGTAGTTCTTaGCGGCTGACTCGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSSCCSS*RLTRAR
Trigger: TCGAGCGCGAGTCAGCCGGCAAGAACTACAACAAGA...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCGTGGCCGTGTGCACCTaGTCCGTGGCATTCATGTCC +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPVAVCT*SVAFMS
Trigger: GGACATGAATGCCACGGAGCAGGTGCACACGGCCAC...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAAGCATGGTGGCCGTGTaGACCTGCTCCGTGGCATTC +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGSMVAV*TCSVAF
Trigger: GAATGCCACGGAGCAGGTGCACACGGCCACCATGCT...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCAGCTAACAGGTTCCGGTAGTAGTACTTGGTaGGGGAATACTCGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: LGAAGSISGCGEEQLTGSGSSTW*GNTRSQ
Trigger: TTGAGAGCGAGTATTCCCGCACCAAGTACTACTACC...GGAACCTGTTAGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTAGCAGGCCTTCTCGGTaGCGTAGCTGCGGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCSRPSR*RSCGSQ
Trigger: TTGACTACCGCAGCTACGGCACCGAGAAGGCCTGCT...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGACTTCGGATCATCTTGTaGAGGGTCACCATGAGGAAC +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGLRIIL*RVTMRN
Trigger: GTTCCTCATGGTGACCCTGCACAAGATGATCCGAAG...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGTTGCTGTACTCCTTGTaGACCTTCTTCTGTAAGGCG +
Preference number: 4 (lower is better)
Translates to: VREGPWNCPLPSSESSGKLLYSL*TFFCKA
Trigger: CGCCTTACAGAAGAAGGTGCACAAGGAGTACAGCAA...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCTGTAGTAGCGGGTGTTaGTTCGCATGGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVCSSGC*FAWLRS
Trigger: AGACCTCAGCCATGCGAAGCAACACCCGCTACTACA...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGCCCCGCAGGTTGTTGTaGACCAGCTCTGAGATGATC +
Preference number: 4 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPPRRLL*TSSEMI
Trigger: GATCATCTCAGAGCTGGTGCACAACAACCTGCGGGG...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCTTGGCCGCGCTGCTaGTCCCCCGCAGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPPWPRC*SPAGCC
Trigger: ACAACAACCTGCGGGGGAGCAGCAGCGCGGCCAAGG...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCTCAAGGCCTGGGGCTaGCAGGTAGCCCTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPLKAWG*QVALVA
Trigger: AGCCACGAGGGCTACCTGGCAGCCCCAGGCCTTGAG...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCCCCTGGTCCATGAGGTaGCCTCAGAGACTGGTGACC +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPPWSMR*PQRLVT
Trigger: GGTCACCAGTCTCTGAGGGCACCTCATGGACCAGGG...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGACCCTGGTCCATGAGGTaGCCTCAGAGACTGGTGACC +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGPWSMR*PQRLVT
Trigger: GGTCACCAGTCTCTGAGGGCACCTCATGGACCAGGG...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCACTGCTCCCTCTGGGTaGAGCCGGCAGCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPTAPSG*SRQHFW
Trigger: CCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGT...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGTCTGTCCTGCCTCACTaGTCCCTCTGGGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQSVLPH*SLWVQP
Trigger: CGGCTGCACCCAGAGGGAGCAGTGAGGCAGGACAGA...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCAGTCCCCCTGCCCTaGGGCCTTTTCCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPPVPLP*GLFPVS
Trigger: GGAGACTGGGAAAAGGCCGCAGGGCAGGGGGACTGG...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGCCTCAGCCATACCCATaGCCTCCACAACCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMPQPYP*PPQPQC
Trigger: GCACTGGGGTTGTGGAGGGCATGGGTATGGCTGAGG...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCCCTGCTCATGCCTCCTaGCCGCTCTTCACAGACCTC +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPPAHAS*PLFTDL
Trigger: GAGGTCTGTGAAGAGCGGGCAGGAGGCATGAGCAGG...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GTCTTCTGGTGTAATGGGTTAGGCCTTTCTACCAGAAAAAGCCAGAGTTGGAACCGGCTAGGCGGGCCATaGTGGCAGCCGGGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: VFWCNGLGLSTRKSQSWNRLGGP*WQPGAC
Trigger: ACACGCACCCGGCTGCCACCATGGCCCGCCTAGCCG...GTTCCAACTCTGGCTTTTTCTGGTAGAAAGGCCTAACCCATTACACCAGAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGGTCGGGCCAGCTCGCTaGCGATGTTGGCCGCGTTCT +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPVGPAR*RCWPRS
Trigger: AGAACGCGGCCAACATCGCCAGCGAGCTGGCCCGAC...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCCGCAGGGCCTGCAGCTaGGCATCCAGGATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTRRACS*ASRMSS
Trigger: GCTGGACATCCTGGATGCCCAGCTGCAGGCCCTGCG...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGACAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGACCAGTAGCCCAGCATaGAACGCTCCGAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: GQRSHLDKASLGVKRSPPTSSPA*NAPSSS
Trigger: GGAACTACTCGGAGCGTTCCATGCTGGGCTACTGGT...CGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTTGGTATGGGTCTTGTTaGACTCCACCAGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCWYGSC*TPPGGS
Trigger: GCTGCCGCCTGGTGGAGTCCAACAAGACCCATACCA...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGACCAGGTAGTAGTACTTaGTGCGGGAATACTCGCTCT +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGPGSST*CGNTRS
Trigger: AGAGCGAGTATTCCCGCACCAAGTACTACTACCTGG...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGCTGCGGTAGTCAATaGCAGCCGCGATGCCCACCA +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPSCGSQ*QPRCPP
Trigger: TGGTGGGCATCGCGGCTGCCATTGACTACCGCAGCT...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTCCGGGAAGGGCCATGGAACTGTCCCTTGCCCTCCTCAGAGTCGTCTGGCAAGGATAACGAAGGAGACTaGCCCGATGAAACTCCAGAT +
Preference number: 4 (lower is better)
Translates to: VREGPWNCPLPSSESSGKDNEGD*PDETPD
Trigger: ATCTGGAGTTTCATCGGGCCAGTCTCCTTCGTTATC...CTTGCCAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATGGCCCTTCCCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCAAGATGAAGACCCCCTaGAAGGCGTTGAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSKMKTP*KALKVV
Trigger: CACCACCTTCAACGCCTTCCAGGGGGTCTTCATCTT...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAGCAGGTGGTTCCCCATaGTACCTCGGTTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGAGGSP*YLGSGW
Trigger: CCACCCTGAACCGAGGTACCATGGGGAACCACCTGC...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGGGGTGTTGTAGGGACTaGTGCCCCCACGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPGCCRD*CPHGAA
Trigger: TGCAGCCCCGTGGGGGCACCAGTCCCTACAACACCC...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCTGGCTGAGGGGCACCTaGAGAGAGTGGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTWLRGT*REWPTS
Trigger: GCTGGTGGGCCACTCTCTCCAGGTGCCCCTCAGCCA...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGCCTGTCTGTGAACCCTaGCACCTCAGGCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQPVCEP*HLRPPG
Trigger: ACCTGGGGGCCTGAGGTGCCAGGGTTCACAGACAGG...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGCCGGCAGCATTTCTaGCTGCGGAGAGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPSRQHF*LRRGAA
Trigger: AGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCT...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGGGTCATTGGGTGCACTaGGAGGCAGAGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQGHWVH*EAEGAG
Trigger: ACCTGCCCCCTCTGCCTCCCAGTGCACCCAATGACC...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAAGGGAGGGGGTCATTaGGTGCACTGGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPKGGGH*VHWEAE
Trigger: CTCTGCCTCCCAGTGCACCCAATGACCCCCTCCCTT...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGTGGAGGGGCCACCTCTaGGGAAACGGCAATGCAGGG +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQWRGHL*GNGNAG
Trigger: CCCTGCATTGCCGTTTCCCCAGAGGTGGCCCCTCCA...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCCAGGTCTGGTTAGGTTaGGGGGACACCTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPQVWLG*GDTWAL
Trigger: CAGAGCCCAGGTGTCCCCCCAACCTAACCAGACCTG...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGCACTCGACCCAAAATTaGTTTGGCATATCGAAAAGG +
Preference number: 4 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPEHSTQN*FGISKR
Trigger: CCTTTTCGATATGCCAAACCAATTTTGGGTCGAGTG...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp GTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGAGTTGTTACACCTCTGTaGCATGATCTTGAAGGCGTC +
Preference number: 4 (lower is better)
Translates to: VVLHQESPQGRGSLGALGVVTPL*HDLEGV
Trigger: GACGCCTTCAAGATCATGTCACAGAGGTGTAACAAC...TCCCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGGGACCCCACACACCATaGAGGCGTTGGATGCCGAGC +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPGPHTP*RRWMPS
Trigger: GCTCGGCATCCAACGCCTTCATGGTGTGTGGGGTCC...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCACAGCGAAGTTGGTaGGGTGGCTGCAGGCACACG +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTAQRSW*GGCRHT
Trigger: CGTGTGCCTGCAGCCACCTCACCAACTTCGCTGTGC...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGTTCTGTAAGGCGCAGTaGAAGACGAAGATGAAGACC +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWFCKAQ*KTKMKT
Trigger: GGTCTTCATCTTCGTCTTTCACTGCGCCTTACAGAA...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCGTTGCTTCGCATGGCTaGGGTCTTGAGGGATCCGTG +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPVASHG*GLEGSV
Trigger: CACGGATCCCTCAAGACCTCAGCCATGCGAAGCAAC...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCACAGCGCAGCCATCTTaGCAAAGCATCTTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVTAQPS*QSIFGC
Trigger: ACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGT...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCTGCAGCGGGTCCTTaGACCATGCGCCAGACTGGT +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPPAAGP*TMRQTG
Trigger: ACCAGTCTGGCGCATGGTGCAAGGACCCGCTGCAGG...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGGTGGCCGTGTGCACCTaGTCCGTGGCATTCATGTCC +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQVAVCT*SVAFMS
Trigger: GGACATGAATGCCACGGAGCAGGTGCACACGGCCAC...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCCCATTGCGGCTGTTCTaGTTGATGGTTTTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSPLRLF*LMVLAD
Trigger: GTCTGCCAAAACCATCAAGCAGAACAGCCGCAATGG...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGGGTAGTAGTACTTGGTaGGGGAATACTCGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWGSSTW*GNTRSQ
Trigger: TTGAGAGCGAGTATTCCCGCACCAAGTACTACTACC...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGCAGGCCTTCTCGGTaGCGTAGCTGCGGTAGTCAA +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPSRPSR*RSCGSQ
Trigger: TTGACTACCGCAGCTACGGCACCGAGAAGGCCTGCT...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCCTTCGGATCATCTTGTaGAGGGTCACCATGAGGAAC +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSLRIIL*RVTMRN
Trigger: GTTCCTCATGGTGACCCTGCACAAGATGATCCGAAG...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCGGGTGGGGAGCGGATaGAGCAGTAGGAGTGACGCA +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPRVGSG*SSRSDA
Trigger: TGCGTCACTCCTACTGCTGCATCCGCTCCCCACCCG...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCTGTTGTAGGGACTGGTaGCCCCACGGGGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTCCRDW*PHGAAA
Trigger: TGCTGCAGCCCCGTGGGGGCACCAGTCCCTACAACA...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTAGTCTGGAAGTGGGCTaGACCCTTCCAAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCSLEVG*TLPSSP
Trigger: GGGAGAACTTGGAAGGGTGCAGCCCACTTCCAGACT...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCCAGAGGGGGCAGGTTTaGTTGCGGGGCAGGGACCAA +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTQRGQV*LRGRDQ
Trigger: TTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTG...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCAGAGGGGGCAGGTTTaGTTGCGGGGCAGGGACCAA +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPQRGQV*LRGRDQ
Trigger: TTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTG...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCTGCGGGGAGTTGTaGTTCATCAGGAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPPCGEL*FIRSRP
Trigger: GGGGCGACTCCTGATGAAGCACAACTCCCCGCAGGG...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTCACAGGACTGGGAACTaGCCAAATATGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCHRTGN*PNMATP
Trigger: AGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTG...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCTGGGGAAACGGCAATaGAGGGGCTGGGCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPLGKRQ*RGWARV
Trigger: CACCCTAGCCCAGCCCCTGCATTGCCGTTTCCCCAG...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTCATGGAACTGTCCCTTaGCCTCCTCAGAGTCGTCTG +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCHGTVP*PPQSRL
Trigger: CAGACGACTCTGAGGAGGGCAAGGGACAGTTCCATG...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCCTCCTCGCCTGCTCATaGCTCCTGCCCGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTLLACS*LLPALH
Trigger: GTGAAGAGCGGGCAGGAGGCATGAGCAGGCGAGGAG...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGGCACCGCAGCTCGATaGGGTAGCCTTCACACGCCA +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTGTAAR*GSLHTP
Trigger: TGGCGTGTGAAGGCTACCCCATCGAGCTGCGGTGCC...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCACTCGTGTGTCGAGGTaGGCTCCAGCACCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPTRVSR*APAPSA
Trigger: TGCAGAAGGTGCTGGAGCCCACCTCGACACACGAGT...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCCACCATGCGCCAGACTaGTGCTCTGACTCGTGTGTC +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPHHAPD*CSDSCV
Trigger: GACACACGAGTCAGAGCACCAGTCTGGCGCATGGTG...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGACTGGGGCTGTGGCTaGAGGCAGATCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTDWGCG*RQIRSQ
Trigger: CTGGGACCTGATCTGCCTCCAGCCACAGCCCCAGTC...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCAAGGCTGGTAGACACTaGAAGGAGGCAATTCCTCGA +
Preference number: 4 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGKAGRH*KEAIPR
Trigger: TCGAGGAATTGCCTCCTTCCAGTGTCTACCAGCCTT...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCAAGGCTGGTAGACACTaGAAGGAGGCAATTCCTCGA +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSKAGRH*KEAIPR
Trigger: TCGAGGAATTGCCTCCTTCCAGTGTCTACCAGCCTT...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGGGACCACGTTCTCCTTaGCAGCCAGGAAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPGPRSP*QPGSGQ
Trigger: CTGCCCGCTTCCTGGCTGCCAAGGAGAACGTGGTCC...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCCTCGGGTACTCCTCCTaGGGGAACACCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTLGYSS*GNTSSC
Trigger: GCAGGAGCTGGTGTTCCCCCAGGAGGAGTACCCGAG...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCGTTTTGGCAGACAGCTaGATGGAGTTCTTTCTCGGG +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSVLADS*MEFFLG
Trigger: CCCGAGAAAGAACTCCATCCAGCTGTCTGCCAAAAC...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTACCAGTAGCCCAGCATaGAACGCTCCGAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCTSSPA*NAPSSS
Trigger: GGAACTACTCGGAGCGTTCCATGCTGGGCTACTGGT...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGTGGTATGGGTCTTGTTaGACTCCACCAGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMWYGSC*TPPGGS
Trigger: GCTGCCGCCTGGTGGAGTCCAACAAGACCCATACCA...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGGGGTTGGTCAGCAGGTaGTTCCCCATGGTACCTCGG +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQGLVSR*FPMVPR
Trigger: CCGAGGTACCATGGGGAACCACCTGCTGACCAACCC...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCTGCAGCACGGGGTTaGTCAGCAGGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTAAARG*SAGGSP
Trigger: TGGGGAACCACCTGCTGACCAACCCCGTGCTGCAGC...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCCTCCCAAGGGGTGCTTaGGTTCCCGGTAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTLPRGA*VPGSSL
Trigger: CAGGGAGCTACCGGGAACCCAAGCACCCCTTGGGAG...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCCCTGTCTGTGAACCCTaGCACCTCAGGCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTPVCEP*HLRPPG
Trigger: ACCTGGGGGCCTGAGGTGCCAGGGTTCACAGACAGG...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTCTTCTGGTGTAATGGGTTAGGCCTTTCTACCAGAAAAAGCCAGAGTTGGAACCCCAGCCCTGGCACCTaGCTTCGTCTTCCCTGCGGG +
Preference number: 4 (lower is better)
Translates to: VFWCNGLGLSTRKSQSWNPSPGT*LRLPCG
Trigger: CCCGCAGGGAAGACGAAGCCAGGTGCCAGGGCTGGG...GTTCCAACTCTGGCTTTTTCTGGTAGAAAGGCCTAACCCATTACACCAGAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGGGGCAGGGAGGAAGTTaGCCTCTCTGTGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQGQGGS*PLCVPQ
Trigger: CTGAGGCACACAGAGAGGCCAACTTCCTCCCTGCCC...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGACTTCTGCAGGGTCCCTaGGCACACGAAGATGTAGGG +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGLLQGP*AHEDVG
Trigger: CCCTACATCTTCGTGTGCCCAGGGACCCTGCAGAAG...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361434.7
ENST00000673576.1
3UTR CAA 72 bp CCGGCTGGAACAGGACCCGATACACCCTCTCTCCCTTaGATTGTCCGAGTCTGGAGAGATACAAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PAGTGPDTPSLP*IVRVWRDTRKA
Trigger: AGCCTTCCTTGTATCTCTCCAGACTCGGACAATCAAAGGGAGAGAGGGTGTATCGGGTCCTGTTCCAGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCGTTGTTACACCTCTGTaGCATGATCTTGAAGGCGTC +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVVVTPL*HDLEGV
Trigger: GACGCCTTCAAGATCATGTCACAGAGGTGTAACAAC...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCGGTTGGCATTGGTGTTaGAGGCATAGTCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPGWHWC*RHSPRG
Trigger: ACCGCGTGGACTATGCCTTCAACACCAATGCCAACC...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGGTTGGCATTGGTGTTaGAGGCATAGTCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMGWHWC*RHSPRG
Trigger: ACCGCGTGGACTATGCCTTCAACACCAATGCCAACC...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGAGTCAACGGAGGAGATaGACTGGTAGGGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMSQRRR*TGRGWG
Trigger: TCCCCAACCCCTACCAGTTCATCTCCTCCGTTGACT...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GTCTTCTGGTGTAATGGGTTAGGCCTTTCTACCAGAAAAAGCCAGAGTTGGAACGTAGTTCTTGCCGGCTaGCTCGCGCTCGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: VFWCNGLGLSTRKSQSWNVVLAG*LALDGP
Trigger: CGGCCCATCGAGCGCGAGTCAGCCGGCAAGAACTAC...GTTCCAACTCTGGCTTTTTCTGGTAGAAAGGCCTAACCCATTACACCAGAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGACTGTGTTCAGGACTGTaGCCTCCAGGACCACGTTCT +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGLCSGL*PPGPRS
Trigger: AGAACGTGGTCCTGGAGGTCACAGTCCTGAACACAG...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTTGCGGCTGTTCTGCTTaGTGGTTTTGGCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCCGCSA*WFWQTA
Trigger: AGCTGTCTGCCAAAACCATCAAGCAGAACAGCCGCA...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTGGGCTTGAGCACAGATaGGCTTCGGATCATCTTGTG +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCGLEHR*ASDHLV
Trigger: CACAAGATGATCCGAAGCTCATCTGTGCTCAAGCCC...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCTTCTGTAAGGCGCAGTaGAAGACGAAGATGAAGACC +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSFCKAQ*KTKMKT
Trigger: GGTCTTCATCTTCGTCTTTCACTGCGCCTTACAGAA...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCAGGAGTAACTGTTATTaGAGTTGCCGTTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSRSNCY*SCRSGA
Trigger: TGCCCCTGAACGGCAACTTCAATAACAGTTACTCCT...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCAGGTTAGAGTCCCCTaGGGGGACTGTAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPQVRVP*GDCRAH
Trigger: ATGGGCCCTACAGTCCCCTCAGGGGACTCTAACCTG...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGACACCCTCTCTCCCTTTaGTTGTCCGAGTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGHPLSL*LSESGE
Trigger: CTCTCCAGACTCGGACAATCAAAGGGAGAGAGGGTG...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCAGTCAGTGTGTCCGTaGGGTAGGGGATCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPQSVCP*GRGSRA
Trigger: TGCCCTGGATCCCCTACCGCACGGACACACTGACTG...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGCATGAAGGCGTTGGATaGCGAGCGCTTGTCGTAACC +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMHEGVG*RALVVT
Trigger: GGTTACGACAAGCGCTCGGCATCCAACGCCTTCATG...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGGGAACACCAGCTCCTaGACCTGGCCCTCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTGNTSS*TWPSVF
Trigger: GAACACAGAGGGCCAGGTGCAGGAGCTGGTGTTCCC...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGTCTCGGTGCCGTAGCTaGGGTAGTCAATGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPSRCRS*GSQWQP
Trigger: CGGCTGCCATTGACTACCGCAGCTACGGCACCGAGA...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGACCCCGCAGGTTGTTGTaGACCAGCTCTGAGATGATC +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGPRRLL*TSSEMI
Trigger: GATCATCTCAGAGCTGGTGCACAACAACCTGCGGGG...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GTCTTCTGGTGTAATGGGTTAGGCCTTTCTACCAGAAAAAGCCAGAGTTGGAACGTGACCAGCTGCATCTaGCCGTCCCCATCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: VFWCNGLGLSTRKSQSWNVTSCI*PSPSGP
Trigger: AGGGCCCGATGGGGACGGGCAGATGCAGCTGGTCAC...GTTCCAACTCTGGCTTTTTCTGGTAGAAAGGCCTAACCCATTACACCAGAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCACTGCTCCCTCTGGGTaGAGCCGGCAGCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTTAPSG*SRQHFW
Trigger: CCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGT...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGACACAGGACTGGGAACTaGCCAAATATGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGHRTGN*PNMATP
Trigger: AGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTG...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGTCCAGACCCAAAATCTaGTCCCCAGATAGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMSRPKI*SPDSRA
Trigger: GGCTCGGCTATCTGGGGAGCAGATTTTGGGTCTGGA...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCTCCAGACCCAAAATCTaGTCCCCAGATAGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPSRPKI*SPDSRA
Trigger: GGCTCGGCTATCTGGGGAGCAGATTTTGGGTCTGGA...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCCCTGCTCATGCCTCCTaGCCGCTCTTCACAGACCTC +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTPAHAS*PLFTDL
Trigger: GAGGTCTGTGAAGAGCGGGCAGGAGGCATGAGCAGG...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGAGATCAGGTCCCAGCTaGTTGATGGCACCCACTGGG +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQRSGPS*LMAPTG
Trigger: CCCAGTGGGTGCCATCAACCAGCTGGGACCTGATCT...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCCCACTCTTGATCTTCTaGGCCACCTGGTTGACCCAG +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPPLLIF*ATWLTQ
Trigger: CTGGGTCAACCAGGTGGCCCAGAAGATCAAGAGTGG...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGTGTGCACCTGCTCCGTaGCATTCATGTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMCAPAP*HSCPSR
Trigger: CCTGGAAGGACATGAATGCCACGGAGCAGGTGCACA...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCTGTGCACCTGCTCCGTaGCATTCATGTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPCAPAP*HSCPSR
Trigger: CCTGGAAGGACATGAATGCCACGGAGCAGGTGCACA...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGCGGCCAGCTTCACTGTaGCATTCTCCGTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQRPASL*HSPWTG
Trigger: TCCTGTCCACGGAGAATGCCACAGTGAAGCTGGCCG...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAACCAGTAGCCCAGCATaGAACGCTCCGAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGTSSPA*NAPSSS
Trigger: GGAACTACTCGGAGCGTTCCATGCTGGGCTACTGGT...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAGGCTGCAGGCACACGTaGTATGGGTCTTGTTGGACT +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGGCRHT*YGSCWT
Trigger: AGTCCAACAAGACCCATACCACGTGTGCCTGCAGCC...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCGGGAGAGTCTGGAAGTaGGCTGCACCCTTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPGRVWK*AAPFQV
Trigger: AACTTGGAAGGGTGCAGCCCACTTCCAGACTCTCCC...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCTCCAGTGGGGGCCTTTaGCAACCTCAGAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTSSGGL*QPQKLP
Trigger: GGGCAGCTTCTGAGGTTGCCAAAGGCCCCCACTGGA...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCACAGGTTCCATCCAGTaGGGGCCTTTGGCAACCTCA +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPTGSIQ*GPLATS
Trigger: TGAGGTTGCCAAAGGCCCCCACTGGATGGAACCTGT...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCAGCCGGCAGCATTTCTaGCTGCGGAGAGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTSRQHF*LRRGAA
Trigger: AGCTGCTCCTCTCCGCAGCCAGAAATGCTGCCGGCT...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCGCAGGCTCCCGGTaGCTTCAAGTGATGAGATTT +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMAAGSR*LQVMRF
Trigger: AAATCTCATCACTTGAAGCCACCGGGAGCCTGCGGC...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCATCAACCTCTCTAGGTaGGAAATCAGCCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVINLSR*EISPIF
Trigger: GAAGATGGGGCTGATTTCCCACCTAGAGAGGTTGAT...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCAGAAAAAGCCAGAGTTaGAACCCAACCCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVRKSQS*NPTPPL
Trigger: AAGAGGTGGGGTTGGGTTCCAACTCTGGCTTTTTCT...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GAGTTGTGCTTCATCAGGAGTCGCCCCAAGGGAGGGGGTCATTGGGTGCACTGGTTGATTGTCCGAGTCTaGAGAGATACAAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: ELCFIRSRPKGGGHWVHWLIVRV*RDTRKA
Trigger: AGCCTTCCTTGTATCTCTCCAGACTCGGACAATCAA...CCAGTGCACCCAATGACCCCCTCCCTTGGGGCGACTCCTGATGAAGCACAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGCTTCTGCAGGGTCCCTaGGCACACGAAGATGTAGGG +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQLLQGP*AHEDVG
Trigger: CCCTACATCTTCGTGTGCCCAGGGACCCTGCAGAAG...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361434.7
ENST00000673576.1
CDS-3UTR TCA 90 bp GTCTTCTGGTGTAATGGGTTAGGCCTTTCTACCAGAAAAAGCCAGAGTTGGAACGCACAGCGAAGTTGGTaGGGTGGCTGCAGGCACACG +
Preference number: 4 (lower is better)
Translates to: VFWCNGLGLSTRKSQSWNAQRSW*GGCRHT
Trigger: CGTGTGCCTGCAGCCACCTCACCAACTTCGCTGTGC...GTTCCAACTCTGGCTTTTTCTGGTAGAAAGGCCTAACCCATTACACCAGAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGACAGCAGCAGCTCGTTaGTGCGGCCCTGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPTAAAR*CGPGRS
Trigger: AGATCTACCAGGGCCGCATCAACGAGCTGCTGCTGT...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCGGGCTTGAGCACAGATaGGCTTCGGATCATCTTGTG +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPGLEHR*ASDHLV
Trigger: CACAAGATGATCCGAAGCTCATCTGTGCTCAAGCCC...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGTTGCTTCGCATGGCTaGGGTCTTGAGGGATCCGTG +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTVASHG*GLEGSV
Trigger: CACGGATCCCTCAAGACCTCAGCCATGCGAAGCAAC...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGGTTGCTTCGCATGGCTaGGGTCTTGAGGGATCCGTG +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPVASHG*GLEGSV
Trigger: CACGGATCCCTCAAGACCTCAGCCATGCGAAGCAAC...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGGGGATTGAAGCCCACTaGCTCGGCGATGAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPGIEAH*LGDEGV
Trigger: AACACCCTCATCGCCGAGTCAGTGGGCTTCAATCCC...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAATGGCAGCAGCAGGCTaGGACCCGAAGATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGMAAAG*DPKMFE
Trigger: TTCAAACATCTTCGGGTCTCAGCCTGCTGCTGCCAT...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCCCACCACGCACTGGGTaGGGTTGTTACACCTCTGTG +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTPPRTG*GCYTSV
Trigger: CACAGAGGTGTAACAACCGCACCCAGTGCGTGGTGG...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCATGCGCCAGACTGGTaGTCTGACTCGTGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPHAPDW*SDSCVE
Trigger: CTCGACACACGAGTCAGAGCACCAGTCTGGCGCATG...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TCACTACACTTCCCCCAAATAGAGCTGGTGCGTGTGGCTGGTGGGAAACCCTGTCTTCGGATCATCTTGTaGAGGGTCACCATGAGGAAC +
Preference number: 4 (lower is better)
Translates to: SLHFPQIELVRVAGGKPCLRIIL*RVTMRN
Trigger: GTTCCTCATGGTGACCCTGCACAAGATGATCCGAAG...ACAGGGTTTCCCACCAGCCACACGCACCAGCTCTATTTGGGGGAAGTGTAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGCCCCGCAGGTTGTTGTaGACCAGCTCTGAGATGATC +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQPRRLL*TSSEMI
Trigger: GATCATCTCAGAGCTGGTGCACAACAACCTGCGGGG...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGTTTGTTCTCGTTAAATaGACTCGACCCAAAATTGGT +
Preference number: 4 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGFVLVK*TRPKIG
Trigger: ACCAATTTTGGGTCGAGTGCATTTAACGAGAACAAA...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GTCTTCTGGTGTAATGGGTTAGGCCTTTCTACCAGAAAAAGCCAGAGTTGGAACGGCACCGCAGCTCGATaGGGTAGCCTTCACACGCCA +
Preference number: 4 (lower is better)
Translates to: VFWCNGLGLSTRKSQSWNGTAAR*GSLHTP
Trigger: TGGCGTGTGAAGGCTACCCCATCGAGCTGCGGTGCC...GTTCCAACTCTGGCTTTTTCTGGTAGAAAGGCCTAACCCATTACACCAGAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGCCACTCTTGATCTTCTaGGCCACCTGGTTGACCCAG +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQPLLIF*ATWLTQ
Trigger: CTGGGTCAACCAGGTGGCCCAGAAGATCAAGAGTGG...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGTGTGCACCTGCTCCGTaGCATTCATGTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQCAPAP*HSCPSR
Trigger: CCTGGAAGGACATGAATGCCACGGAGCAGGTGCACA...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAATGCACAGGTTCTTGTaGATGGTGTTGCGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGMHRFL*MVLRSV
Trigger: GACCGACCGCAACACCATCCACAAGAACCTGTGCAT...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAAAGATGAAGACCCCCTaGAAGGCGTTGAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGKMKTP*KALKVV
Trigger: CACCACCTTCAACGCCTTCCAGGGGGTCTTCATCTT...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCTTGATTGTCCGAGTCTaGAGAGATACAAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSLIVRV*RDTRKA
Trigger: AGCCTTCCTTGTATCTCTCCAGACTCGGACAATCAA...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGAGTGACGCAGGCACTTaGTGTACTCCTTGTGCACCT +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQSDAGT*CTPCAP
Trigger: AGGTGCACAAGGAGTACAGCAAGTGCCTGCGTCACT...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GTCTTCTGGTGTAATGGGTTAGGCCTTTCTACCAGAAAAAGCCAGAGTTGGAACACTGCTCCCTCTGGGTaGAGCCGGCAGCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: VFWCNGLGLSTRKSQSWNTAPSG*SRQHFW
Trigger: CCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGT...GTTCCAACTCTGGCTTTTTCTGGTAGAAAGGCCTAACCCATTACACCAGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCCAGGCACACGTGGTATaGGTCTTGTTGGACTCCACC +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTQAHVV*VLLDST
Trigger: GGTGGAGTCCAACAAGACCCATACCACGTGTGCCTG...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGGGCTGCAGGCACACGTaGTATGGGTCTTGTTGGACT +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPGCRHT*YGSCWT
Trigger: AGTCCAACAAGACCCATACCACGTGTGCCTGCAGCC...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGATGCACAGGTTCTTGTaGATGGTGTTGCGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQMHRFL*MVLRSV
Trigger: GACCGACCGCAACACCATCCACAAGAACCTGTGCAT...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGCCAGGTAGTAGTACTTaGTGCGGGAATACTCGCTCT +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMPGSST*CGNTRS
Trigger: AGAGCGAGTATTCCCGCACCAAGTACTACTACCTGG...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTCTTCTGGTGTAATGGGTTAGGCCTTTCTACCAGAAAAAGCCAGAGTTGGAACTCCAGTGGGGGCCTTTaGCAACCTCAGAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VFWCNGLGLSTRKSQSWNSSGGL*QPQKLP
Trigger: GGGCAGCTTCTGAGGTTGCCAAAGGCCCCCACTGGA...GTTCCAACTCTGGCTTTTTCTGGTAGAAAGGCCTAACCCATTACACCAGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGAGATACAAGGAAGGCTaGGCAGGGAGGAAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPRYKEG*AGRKLA
Trigger: GGCCAACTTCCTCCCTGCCCAGCCTTCCTTGTATCT...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CAGCGCAGCCATCTTGACAAAGCATCTTTGGGTGTGAAGAGGTCTCCCCCGGGCGACCCAAAATTGGTTTaGCATATCGAAAAGGAGACC +
Preference number: 4 (lower is better)
Translates to: QRSHLDKASLGVKRSPPGDPKLV*HIEKET
Trigger: GGTCTCCTTTTCGATATGCCAAACCAATTTTGGGTC...GCCCGGGGGAGACCTCTTCACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCGACCCAAAATTGGTTTaGCATATCGAAAAGGAGACC +
Preference number: 4 (lower is better)
Translates to: AFSQSPGSRELQRRRNLSDPKLV*HIEKET
Trigger: GGTCTCCTTTTCGATATGCCAAACCAATTTTGGGTC...GGACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGAGGAACCTGTCCACTCGACCCAAAATTaGTTTGGCATATCGAAAAGG +
Preference number: 4 (lower is better)
Translates to: GLFPVSREQGITAQEEPVHSTQN*FGISKR
Trigger: CCTTTTCGATATGCCAAACCAATTTTGGGTCGAGTG...GACAGGTTCCTCCTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAAGGAGTAACTGTTATTaGAGTTGCCGTTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGRSNCY*SCRSGA
Trigger: TGCCCCTGAACGGCAACTTCAATAACAGTTACTCCT...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp GTCTTCTGGTGTAATGGGTTAGGCCTTTCTACCAGAAAAAGCCAGAGTTGGAACCCACCACGCACTGGGTaGGGTTGTTACACCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VFWCNGLGLSTRKSQSWNPPRTG*GCYTSV
Trigger: CACAGAGGTGTAACAACCGCACCCAGTGCGTGGTGG...GTTCCAACTCTGGCTTTTTCTGGTAGAAAGGCCTAACCCATTACACCAGAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGAGGTAGTAGTACTTGGTaGGGGAATACTCGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGGSSTW*GNTRSQ
Trigger: TTGAGAGCGAGTATTCCCGCACCAAGTACTACTACC...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGTTGCTGTACTCCTTGTaGACCTTCTTCTGTAAGGCG +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMLLYSL*TFFCKA
Trigger: CGCCTTACAGAAGAAGGTGCACAAGGAGTACAGCAA...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAGGAAACTAAAGCCCTCATTTCCCTTCACAGGGTAGAAGGGTGGGAGAGGGGACAGTTAGCATTGAAGTaGTTCTTGTCCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QETKALISLHRVEGWERGQLALK*FLSSRW
Trigger: CCACCTGGAGGACAAGAACCACTTCAATGCTAACTG...TCCCCTCTCCCACCCTTCTACCCTGTGAAGGGAAATGAGGGCTTTAGTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCCAGTTAGCATTGAAGTaGTTCTTGTCCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPQLALK*FLSSRW
Trigger: CCACCTGGAGGACAAGAACCACTTCAATGCTAACTG...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp GTCTTCTGGTGTAATGGGTTAGGCCTTTCTACCAGAAAAAGCCAGAGTTGGAACTGGTATGGGTCTTGTTaGACTCCACCAGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: VFWCNGLGLSTRKSQSWNWYGSC*TPPGGS
Trigger: GCTGCCGCCTGGTGGAGTCCAACAAGACCCATACCA...GTTCCAACTCTGGCTTTTTCTGGTAGAAAGGCCTAACCCATTACACCAGAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp GTCTTCTGGTGTAATGGGTTAGGCCTTTCTACCAGAAAAAGCCAGAGTTGGAACGCAGGCCGGCGAAGATaGGGCAGGCAATCTCATACT +
Preference number: 4 (lower is better)
Translates to: VFWCNGLGLSTRKSQSWNAGRRR*GRQSHT
Trigger: AGTATGAGATTGCCTGCCCCATCTTCGCCGGCCTGC...GTTCCAACTCTGGCTTTTTCTGGTAGAAAGGCCTAACCCATTACACCAGAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp AAAATCTGCTCCCCAGATAGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGATAACGAAGGAGACTaGCCCGATGAAACTCCAGAT +
Preference number: 4 (lower is better)
Translates to: KICSPDSRAHRTGNCPNMDNEGD*PDETPD
Trigger: ATCTGGAGTTTCATCGGGCCAGTCTCCTTCGTTATC...CATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCTATCTGGGGAGCAGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GTCTTCTGGTGTAATGGGTTAGGCCTTTCTACCAGAAAAAGCCAGAGTTGGAACCTGTGTTCAGGACTGTaGCCTCCAGGACCACGTTCT +
Preference number: 4 (lower is better)
Translates to: VFWCNGLGLSTRKSQSWNLCSGL*PPGPRS
Trigger: AGAACGTGGTCCTGGAGGTCACAGTCCTGAACACAG...GTTCCAACTCTGGCTTTTTCTGGTAGAAAGGCCTAACCCATTACACCAGAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp GGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCGTTGTGCACCAGCTCTaGGATGATCATCTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: GKGASEKVQPLNHQPPPPVVHQL*DDHLLK
Trigger: TTTGAGAAGATGATCATCTCAGAGCTGGTGCACAAC...GGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGACAGCGCAGCCATCTTaGCAAAGCATCTTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPTAQPS*QSIFGC
Trigger: ACACCCAAAGATGCTTTGTCAAGATGGCTGCGCTGT...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCAACTCATGGCACTTGTaGGAAAAGGAGGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTNSWHL*EKEGQR
Trigger: TCTCTGCCCCTCCTTTTCTCACAAGTGCCATGAGTT...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCCCATTGCGGCTGTTCTaGTTGATGGTTTTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTPLRLF*LMVLAD
Trigger: GTCTGCCAAAACCATCAAGCAGAACAGCCGCAATGG...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCATTGCGGCTGTTCTaGTTGATGGTTTTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPPLRLF*LMVLAD
Trigger: GTCTGCCAAAACCATCAAGCAGAACAGCCGCAATGG...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGTTTTGGCAGACAGCTaGATGGAGTTCTTTCTCGGG +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTVLADS*MEFFLG
Trigger: CCCGAGAAAGAACTCCATCCAGCTGTCTGCCAAAAC...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGGTTTTGGCAGACAGCTaGATGGAGTTCTTTCTCGGG +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPVLADS*MEFFLG
Trigger: CCCGAGAAAGAACTCCATCCAGCTGTCTGCCAAAAC...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp GAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCCCAGGTTGTGCACCAGCTCTaGGATGATCATCTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: ERSFRESSTFKPPATTAQVVHQL*DDHLLK
Trigger: TTTGAGAAGATGATCATCTCAGAGCTGGTGCACAAC...CTGGGCGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR GCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCTTGCTGTACTCCTTGTaGACCTTCTTCTGTAAGGCG +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTLLYSL*TFFCKA
Trigger: CGCCTTACAGAAGAAGGTGCACAAGGAGTACAGCAA...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGCAGTTAGCATTGAAGTaGTTCTTGTCCTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPQLALK*FLSSRW
Trigger: CCACCTGGAGGACAAGAACCACTTCAATGCTAACTG...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCATCAACCTCTCTAGGTaGGAAATCAGCCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTINLSR*EISPIF
Trigger: GAAGATGGGGCTGATTTCCCACCTAGAGAGGTTGAT...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCTCACCCATGGTCTTCTaGTGTAATGGGTTAGGCCTT +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTSPMVF*CNGLGL
Trigger: AAGGCCTAACCCATTACACCAGAAGACCATGGGTGA...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR TCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCTCTCCACCACGGCCTTaGTATAATCCTTACAAGTTC +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTSPPRP*YNPYKF
Trigger: GAACTTGTAAGGATTATATCAAGGCCGTGGTGGAGA...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR TCA 90 bp AAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCGAGACCCGAAGATGTTTaGAAACTCATGGCACTTGTG +
Preference number: 4 (lower is better)
Translates to: KGKGASEKVQPLNHQPPPRPEDV*KLMALV
Trigger: CACAAGTGCCATGAGTTTTCAAACATCTTCGGGTCT...CGGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCTCTAGACTTCACCCATaGTCTTCTGGTGTAATGGGT +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTSRLHP*SSGVMG
Trigger: ACCCATTACACCAGAAGACCATGGGTGAAGTCTAGA...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp GTCTTCTGGTGTAATGGGTTAGGCCTTTCTACCAGAAAAAGCCAGAGTTGGAACGGTAGTAGTACTTGGTaGGGGAATACTCGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: VFWCNGLGLSTRKSQSWNGSSTW*GNTRSQ
Trigger: TTGAGAGCGAGTATTCCCGCACCAAGTACTACTACC...GTTCCAACTCTGGCTTTTTCTGGTAGAAAGGCCTAACCCATTACACCAGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR GCA 90 bp CAAGGGGAAAGGAGCTTCAGAGAAAGTTCAACCTTTAAACCACCAGCCACCACCTTTGTTCTCGTTAAATaGACTCGACCCAAAATTGGT +
Preference number: 4 (lower is better)
Translates to: QGERSFRESSTFKPPATTFVLVK*TRPKIG
Trigger: ACCAATTTTGGGTCGAGTGCATTTAACGAGAACAAA...GGTGGTGGCTGGTGGTTTAAAGGTTGAACTTTCTCTGAAGCTCCTTTCCCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS CCA 90 bp CAGACCTGCCAGCCCATGTCTCCCCAGCTGCTCCACGACCCCCGCTaGGCCCTGGGCCCTGGGCCCGAGCACATGTGCCTGCCTGCGAGG +
Preference number: 5 (lower is better)
Translates to: QTCQPMSPQLLHDPR*ALGPGPEHMCLPAR
Trigger: CCTCGCAGGCAGGCACATGTGCTCGGGCCCAGGGCCCAGGGCCCAGCGGGGGTCGTGGAGCAGCTGGGGAGACATGGGCTGGCAGGTCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588677.1
ENST00000672654.1
CDS TCA 90 bp CAGGGCCTCACTGGGCCCCTCAGGGCTGCTGTCCGGGTAGGAGGGTaGGTCCCGCAGGTTGGCCCCGCTGGCATAGAGGGAGTCCCGGCC +
Preference number: 5 (lower is better)
Translates to: QGLTGPLRAAVRVGG*VPQVGPAGIEGVPA
Trigger: GGCCGGGACTCCCTCTATGCCAGCGGGGCCAACCTGCGGGACTCACCCTCCTACCCGGACAGCAGCCCTGAGGGGCCCAGTGAGGCCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS GCA 90 bp AGGTCCCAGCTGGTTGATGGCACCCACTGGGTGCGTGGTGAGGGGTaGCCGGCGGAGCGGGGTGGTGGCTGCGGGCGAGGCTGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: RSQLVDGTHWVRGEG*PAERGGGCGRGCAG
Trigger: ACCAGCACAGCCTCGCCCGCAGCCACCACCCCGCTCCGCCGGGCACCCCTCACCACGCACCCAGTGGGTGCCATCAACCAGCTGGGACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS GCA 90 bp AGGCAATTCCTCGAGTCCCCTTGGGGCAGGGCCTCTCCACCAGCATaGCCTGCTGGGTGGCCGGCCACTGGACCCGCCGTACCTCTCGGG +
Preference number: 5 (lower is better)
Translates to: RQFLESPWGRASPPA*PAGWPATGPAVPLG
Trigger: CCCGAGAGGTACGGCGGGTCCAGTGGCCGGCCACCCAGCAGGGCATGCTGGTGGAGAGGCCCTGCCCCAAGGGGACTCGAGGAATTGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS GCA 90 bp CAGGAGGGGAGGAGAGGGGCCGGCTGGTGGCGCCGTCCTCGGCCGTaGAGCTCTCCGACTCGTCCAGATCGCTCTGGTACAGCACCGACT +
Preference number: 5 (lower is better)
Translates to: QEGRRGAGWWRRPRP*SSPTRPDRSGTAPT
Trigger: AGTCGGTGCTGTACCAGAGCGATCTGGACGAGTCGGAGAGCTGCACGGCCGAGGACGGCGCCACCAGCCGGCCCCTCTCCTCCCCTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS GCA 90 bp ACTCTTGATCTCGAGTCCCCTTGGGGCAGGGCCTCTCCACCAGCATaGCCTGCTGGGTGGCCGGCCACTGGACCCGCCGTACCTCTCGGG +
Preference number: 5 (lower is better)
Translates to: TLDLESPWGRASPPA*PAGWPATGPAVPLG
Trigger: CCCGAGAGGTACGGCGGGTCCAGTGGCCGGCCACCCAGCAGGGCATGCTGGTGGAGAGGCCCTGCCCCAAGGGGACTCGAGATCAAGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589616.1
ENST00000673419.1
CDS-3UTR CAA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGGCCCGGCTCAGGCCTaGGGTGGCCGAGGTGACCAG +
Preference number: 5 (lower is better)
Translates to: PLPCGLFPVSREQGITAQGPAQA*GGRGDQ
Trigger: CTGGTCACCTCGGCCACCCAAGGCCTGAGCCGGGCC...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CAA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGCAGGGGGAGGTGCAGTaGCTGAGGTCAGGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPEQGEVQ*LRSGPR
Trigger: CCGGGGCCCTGACCTCAGCAACTGCACCTCCCCCTG...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS CCA 90 bp CTCGGAGCCAGCAGGCCTTCTCGGTGCCGTAGCTGCGGTAGTCAATaGCAGCCGCGATGCCCACCACCAGGGCCGGGAAGCAGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: LGASRPSRCRSCGSQ*QPRCPPPGPGSSSH
Trigger: GTGGCTACTGCTTCCCGGCCCTGGTGGTGGGCATCGCGGCTGCCATTGACTACCGCAGCTACGGCACCGAGAAGGCCTGCTGGCTCCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CAA 90 bp ACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCCGGAGGCCTGCAGCGGGTCCTaGCACCATGCGCCAGACTGG +
Preference number: 5 (lower is better)
Translates to: TYTEKSWLPGQQRCSAPEACSGS*HHAPDW
Trigger: CCAGTCTGGCGCATGGTGCAAGGACCCGCTGCAGGC...CTCCGGAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CAA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCGCCTGCAGCGGGTCCTaGCACCATGCGCCAGACTGG +
Preference number: 5 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSACSGS*HHAPDW
Trigger: CCAGTCTGGCGCATGGTGCAAGGACCCGCTGCAGGC...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS TCA 90 bp ACCCGCCTGCAGCGGGTCCTTGCACCATGCGCCAGACTGGTGCTCTaGCTCGTGTGTCGAGGTGGGCTCCAGCACCTTCTGCAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: TRLQRVLAPCARLVL*LVCRGGLQHLLQGP
Trigger: GGGACCCTGCAGAAGGTGCTGGAGCCCACCTCGACACACGAGTCAGAGCACCAGTCTGGCGCATGGTGCAAGGACCCGCTGCAGGCGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000591528.1
ENST00000672030.1
ENST00000672190.1
ENST00000673576.1
CDS GCA 90 bp CGGTCACCCGCCTGCAGCGGGTCCTTGCACCATGCGCCAGACTGGTaGTCTGACTCGTGTGTCGAGGTGGGCTCCAGCACCTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RSPACSGSLHHAPDW*SDSCVEVGSSTFCR
Trigger: CCTGCAGAAGGTGCTGGAGCCCACCTCGACACACGAGTCAGAGCACCAGTCTGGCGCATGGTGCAAGGACCCGCTGCAGGCGGGTGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000591528.1
ENST00000672030.1
ENST00000672190.1
ENST00000673576.1
CDS CCA 90 bp CGCCCCCAGGGCCACCCGGGCCTGCTTCGCCGGCCAGCTTCACTGTaGCATTCTCCGTGGACAGGAAGAGGCCCAGGTTGTTGTAGAGGA +
Preference number: 5 (lower is better)
Translates to: RPQGHPGLLRRPASL*HSPWTGRGPGCCRG
Trigger: TCCTCTACAACAACCTGGGCCTCTTCCTGTCCACGGAGAATGCCACAGTGAAGCTGGCCGGCGAAGCAGGCCCGGGTGGCCCTGGGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CAA 90 bp CCTCACTGCTCCCTCTGGGTGCAGCCGGCAGCATTTCTGGCTGCGGAGAGGAGCTTCTGGGCCACCTGGTaGACCCAGGGGGAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: PHCSLWVQPAAFLAAERSFWATW*TQGEVQ
Trigger: CTGCACCTCCCCCTGGGTCAACCAGGTGGCCCAGAA...GCTCCTCTCCGCAGCCAGAAATGCTGCCGGCTGCACCCAGAGGGAGCAGTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CAA 90 bp ACTGGGAGGCAGAGGGGGCAGGTTTGCTTGCGGGGCAGGGACCAAGAGCAAGGGAGCTCGCTGGCGATGTaGGCCGCGTTCTCCCCACTC +
Preference number: 5 (lower is better)
Translates to: TGRQRGQVCLRGRDQEQGSSLAM*AAFSPL
Trigger: GAGTGGGGAGAACGCGGCCAACATCGCCAGCGAGCT...CCCTTGCTCTTGGTCCCTGCCCCGCAAGCAAACCTGCCCCCTCTGCCTCCCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CAA 90 bp AGCCGAGCCCACAGGACTGGGAACTGCCCAAATATGGCCACCCCTGTGGGCTGGCACCAGGCGGCAGCCTaGGGTCGACCAGTAGCCCAG +
Preference number: 5 (lower is better)
Translates to: SRAHRTGNCPNMATPVGWHQAAA*GRPVAQ
Trigger: CTGGGCTACTGGTCGACCCAAGGCTGCCGCCTGGTG...CCAGCCCACAGGGGTGGCCATATTTGGGCAGTTCCCAGTCCTGTGGGCTCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CAA 90 bp TTTCTGTCTCTGGATTGTAAAAAGCTGCTCTGGCGGCCCGCCCGCCCCGGCGGGCACCAGGCGGCAGCCTaGGGTCGACCAGTAGCCCAG +
Preference number: 5 (lower is better)
Translates to: FLSLDCKKLLWRPARPGGHQAAA*GRPVAQ
Trigger: CTGGGCTACTGGTCGACCCAAGGCTGCCGCCTGGTG...CCCGCCGGGGCGGGCGGGCCGCCAGAGCAGCTTTTTACAATCCAGAGACAGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340736.10
ENST00000672190.1
CDS-3UTR CAA 90 bp CCCCTGCCCTGCGGCCTTTTCCCAGTCTCCAGGGAGCAGGGAATTACAGCGCAGGGCTGCAGCACGGGGTaGGTCAGCAGGTGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: PLPCGLFPVSREQGITAQGCSTG*VSRWFP
Trigger: GGGGAACCACCTGCTGACCAACCCCGTGCTGCAGCC...CTGCGCTGTAATTCCCTGCTCCCTGGAGACTGGGAAAAGGCCGCAGGGCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340736.10
ENST00000361434.7
ENST00000672190.1
ENST00000673576.1
CDS-3UTR CAA 90 bp GATGCACGTACACGGAGAAGTCCTGGCTGCCAGGCCAGCAGCGCTGCTCTGCTCGGGGGCGAGGAGGGATaGAAGCCCACTGACTCGGCG +
Preference number: 5 (lower is better)
Translates to: DARTRRSPGCQASSAALLGGEEG*KPTDSA
Trigger: CGCCGAGTCAGTGGGCTTCAATCCCTCCTCGCCCCC...GAGCAGAGCAGCGCTGCTGGCCTGGCAGCCAGGACTTCTCCGTGTACGTGCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340