RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRG6 (Homo sapiens)

Ensembl gene IDs: ENSG00000112414

Ensembl transcript IDs: ENST00000230173.10, ENST00000296932.13, ENST00000367608.6, ENST00000367609.8, ENST00000415128.6, ENST00000435011.6, ENST00000463637.1, ENST00000472054.2, ENST00000508295.2, ENST00000538281.1, ENST00000540208.1, ENST00000541199.5, ENST00000545477.1

Found 711 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTaGACTTTGCCTTTAAGCAGATTGGCTTTGCCAGAATGTCTCCTT +
Preference number: 1 (lower is better)
Translates to: YLFFVQRERPLGSRF*TLPLSRLALPECLL
Trigger: AAGGAGACATTCTGGCAAAGCCAATCTGCTTAAAGGCAAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR TCA 90 bp TTAGGTAAGCTGCATAATAGTATGCAAGGTTTGTATGCAGCAGCCTaGTCCATAAATAATACACCATCTATCTTGCCAGACCTCCTCAGG +
Preference number: 1 (lower is better)
Translates to: LGKLHNSMQGLYAAA*SINNTPSILPDLLR
Trigger: CCTGAGGAGGTCTGGCAAGATAGATGGTGTATTATTTATGGATCAGGCTGCTGCATACAAACCTTGCATACTATTATGCAGCTTACCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR CCA 90 bp AGGGGCAAAAGTAGAGGTGTAAGAGATTCATTCTTAAACAACTCCTaGGAGGTCCAGAATGATGGAACATCAACACTAAACTTAACTCGA +
Preference number: 1 (lower is better)
Translates to: RGKSRGVRDSFLNNS*EVQNDGTSTLNLTR
Trigger: TCGAGTTAAGTTTAGTGTTGATGTTCCATCATTCTGGACCTCCCAGGAGTTGTTTAAGAATGAATCTCTTACACCTCTACTTTTGCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR TCA 90 bp TTTCTGAGTCATCCACTTATGTTATCTTTATTCCCCAGGAGTGAATaGTACAGGCATACACAGAGATTCCTGCCCTTCTTTGCAATCAAT +
Preference number: 1 (lower is better)
Translates to: FLSHPLMLSLFPRSE*YRHTQRFLPFFAIN
Trigger: ATTGATTGCAAAGAAGGGCAGGAATCTCTGTGTATGCCTGTATCATTCACTCCTGGGGAATAAAGATAACATAAGTGGATGACTCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508295.2
3UTR TCA 90 bp CTATCTAGGGTCTTCCTCAGCATTGCTTCTCCCTTGTCTCTAATTTaGATGTCTCCCCTGCATTATGATTACTCTGATTCAATTATATAT +
Preference number: 1 (lower is better)
Translates to: LSRVFLSIASPLSLI*MSPLHYDYSDSIIY
Trigger: ATATATAATTGAATCAGAGTAATCATAATGCAGGGGAGACATTCAAATTAGAGACAAGGGAGAAGCAATGCTGAGGAAGACCCTAGATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR TCA 90 bp GTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAGAATAGTCTaGGAGTTAGGTAAGCTGCATAATAGTATGCAAGGTTTGTATGCA +
Preference number: 1 (lower is better)
Translates to: VSYTFISKQALLRIV*ELGKLHNSMQGLYA
Trigger: TGCATACAAACCTTGCATACTATTATGCAGCTTACCTAACTCTCAGACTATTCTGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR CCA 90 bp CGCCAAAATAAGCAGCCTGTTAATATATGCCTATTGAAAAGGATTTaGCTCAGTGACCTTAGATTTACTATCTTACTTAGAATCTCAGTG +
Preference number: 1 (lower is better)
Translates to: RQNKQPVNICLLKRI*LSDLRFTILLRISV
Trigger: CACTGAGATTCTAAGTAAGATAGTAAATCTAAGGTCACTGAGCCAAATCCTTTTCAATAGGCATATATTAACAGGCTGCTTATTTTGGCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR TCA 90 bp TATGTAACCTCCGCCAAAATAAGCAGCCTGTTAATATATGCCTATTaGAAAGGATTTGGCTCAGTGACCTTAGATTTACTATCTTACTTA +
Preference number: 1 (lower is better)
Translates to: YVTSAKISSLLIYAY*KGFGSVTLDLLSYL
Trigger: TAAGTAAGATAGTAAATCTAAGGTCACTGAGCCAAATCCTTTTCAATAGGCATATATTAACAGGCTGCTTATTTTGGCGGAGGTTACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCAAGCACAGCATGCACTaGGACCGATTTCTAAGAAAC +
Preference number: 2 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTKHSMH*DRFLRN
Trigger: GTTTCTTAGAAATCGGTCTCAGTGCATGCTGTGCTT...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR GCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTGGTCTTCCTCAGCATTaGTTCTCCCTTGTCTCTAAT +
Preference number: 2 (lower is better)
Translates to: LPVFRAERKASRFQVLDFGLPQH*FSLVSN
Trigger: ATTAGAGACAAGGGAGAAGCAATGCTGAGGAAGACC...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR CAA 90 bp CCTCTAGGTTCCAGGTTCTGGACTTTGCCTTTAAGCAGATTGGCTTaGCCAGAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCC +
Preference number: 2 (lower is better)
Translates to: PLGSRFWTLPLSRLA*PECLLFLSLNAVAS
Trigger: GGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTCTGGCAAAGCCAATCTGCTTAAAGGCAAAGTCCAGAACCTGGAACCTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTACCTTATCAATGACCTaGTGGACAGGGATGATTGAT +
Preference number: 2 (lower is better)
Translates to: LPVFRAERKASRFQVLDFTLSMT*WTGMID
Trigger: ATCAATCATCCCTGTCCATCAGGTCATTGATAAGGT...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000296932.13
3UTR-3UTR TCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGCCCTTGTCTCTAATTTaGATGTCTCCCCTGCATTAT +
Preference number: 2 (lower is better)
Translates to: CKLPVFRAERKASRFQVLPLSLI*MSPLHY
Trigger: ATAATGCAGGGGAGACATTCAAATTAGAGACAAGGG...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTTAGGTGGAGTAAAATaGGCTCTATCTAGGGTCTTC +
Preference number: 2 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTLGGVK*ALSRVF
Trigger: GAAGACCCTAGATAGAGCTCATTTTACTCCACCTAA...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR GCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCCCACTGCATACAGCTTaGCTAATGGAAATTCTCCTT +
Preference number: 2 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTPLHTA*LMEILL
Trigger: AAGGAGAATTTCCATTAGGCAAGCTGTATGCAGTGG...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR GCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAATACACCATCTATCTTaGCAGACCTCCTCAGGCTCT +
Preference number: 2 (lower is better)
Translates to: PKSSPISQTANYLFFVQRIHHLS*QTSSGS
Trigger: AGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTAT...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTTTCTTAAACAACTCCTaGGAGGTCCAGAATGATGGA +
Preference number: 2 (lower is better)
Translates to: LPVFRAERKASRFQVLDFFLNNS*EVQNDG
Trigger: TCCATCATTCTGGACCTCCCAGGAGTTGTTTAAGAA...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAAGCTTCTGTGGCTACTaGGTCATGTTACTCTCAGTA +
Preference number: 2 (lower is better)
Translates to: PKSSPISQTANYLFFVQRSFCGY*VMLLSV
Trigger: TACTGAGAGTAACATGACTCAGTAGCCACAGAAGCT...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTTTACTCAGAATAGTCTaGGAGTTAGGTAAGCTGCAT +
Preference number: 2 (lower is better)
Translates to: LPVFRAERKASRFQVLDFLLRIV*ELGKLH
Trigger: ATGCAGCTTACCTAACTCTCAGACTATTCTGAGTAA...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR GCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGTATGCAAGGTTTGTATaGAGCAGCCTGATCCATAAA +
Preference number: 2 (lower is better)
Translates to: CKLPVFRAERKASRFQVLYARFV*SSLIHK
Trigger: TTTATGGATCAGGCTGCTGCATACAAACCTTGCATA...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR GCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCAGCTGCATAATAGTATaGAAGGTTTGTATGCAGCAG +
Preference number: 2 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTSCIIV*KVCMQQ
Trigger: CTGCTGCATACAAACCTTGCATACTATTATGCAGCT...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR CAA 90 bp GAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTGCCTTTAAGCAGATaGGCTTTGCCAGAATGTCTCCTTTTCTTATCACTTAATGCTGTT +
Preference number: 2 (lower is better)
Translates to: ERPLGSRFWTLPLSR*ALPECLLFLSLNAV
Trigger: AACAGCATTAAGTGATAAGAAAAGGAGACATTCTGGCAAAGCCAATCTGCTTAAAGGCAAAGTCCAGAACCTGGAACCTAGAGGCCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGATTAGGTGGAGTAAAATaGGCTCTATCTAGGGTCTTC +
Preference number: 2 (lower is better)
Translates to: PKSSPISQTANYLFFVQRLGGVK*ALSRVF
Trigger: GAAGACCCTAGATAGAGCTCATTTTACTCCACCTAA...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTTTTCTGCCTGTGGTTaGAATGTCATTGAAAATGAG +
Preference number: 2 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTFSACG*NVIENE
Trigger: CTCATTTTCAATGACATTTCAACCACAGGCAGAAAA...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR GCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGTAAACAGTCTTTTCTaGCTGTGGTTGAAATGTCAT +
Preference number: 2 (lower is better)
Translates to: CKLPVFRAERKASRFQVLVNSLF*LWLKCH
Trigger: ATGACATTTCAACCACAGGCAGAAAAGACTGTTTAC...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR GCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTGTAAACAGTCTTTTCTaGCTGTGGTTGAAATGTCAT +
Preference number: 2 (lower is better)
Translates to: LPVFRAERKASRFQVLDFVNSLF*LWLKCH
Trigger: ATGACATTTCAACCACAGGCAGAAAAGACTGTTTAC...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGAAAGTAACACTGGAATaGGATTTGTGGGCATTCAAA +
Preference number: 2 (lower is better)
Translates to: CKLPVFRAERKASRFQVLKVTLE*DLWAFK
Trigger: TTTGAATGCCCACAAATCCCATTCCAGTGTTACTTT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTTCACTTCATATTCCTTaGAACAAAACTCTCAATGGG +
Preference number: 2 (lower is better)
Translates to: LPVFRAERKASRFQVLDFSLHIP*NKTLNG
Trigger: CCCATTGAGAGTTTTGTTCCAAGGAATATGAAGTGA...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGACTGGGAGGTCCAGAATaGTGGAACATCAACACTAAA +
Preference number: 2 (lower is better)
Translates to: NTPSILPDLLRLLYTITRLGGPE*WNINTK
Trigger: TTTAGTGTTGATGTTCCATCATTCTGGACCTCCCAG...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTCTGGGAGGTCCAGAATaGTGGAACATCAACACTAAA +
Preference number: 2 (lower is better)
Translates to: ECLLFLSLNAVASQNLILLGGPE*WNINTK
Trigger: TTTAGTGTTGATGTTCCATCATTCTGGACCTCCCAG...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR GCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGAGTTGCAGTTTACACTaGTTGCAAATCTTCACATTT +
Preference number: 2 (lower is better)
Translates to: CKLPVFRAERKASRFQVLSCSLH*LQIFTF
Trigger: AAATGTGAAGATTTGCAAGCAGTGTAAACTGCAACT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR GCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCATTTACATCACTAGTTaGAGTTTACACTGCTTGCAA +
Preference number: 2 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTIYITS*SLHCLQ
Trigger: TTGCAAGCAGTGTAAACTGCAACTAGTGATGTAAAT...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR GCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTGGTCTTCCTCAGCATTaGTTCTCCCTTGTCTCTAAT +
Preference number: 2 (lower is better)
Translates to: ECLLFLSLNAVASQNLILGLPQH*FSLVSN
Trigger: ATTAGAGACAAGGGAGAAGCAATGCTGAGGAAGACC...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR GCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAAGCTGCATAATAGTATaGAAGGTTTGTATGCAGCAG +
Preference number: 2 (lower is better)
Translates to: PKSSPISQTANYLFFVQRSCIIV*KVCMQQ
Trigger: CTGCTGCATACAAACCTTGCATACTATTATGCAGCT...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTGATATAACGATTAGGTaGAGTAAAATGAGCTCTATC +
Preference number: 2 (lower is better)
Translates to: LPVFRAERKASRFQVLDFDITIR*SKMSSI
Trigger: GATAGAGCTCATTTTACTCCACCTAATCGTTATATC...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCAGAAGATGCAGAAAATaGGTATATCCAGATATAACG +
Preference number: 2 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTRRCRK*VYPDIT
Trigger: CGTTATATCTGGATATACCCATTTTCTGCATCTTCT...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGATTAGGTGGAGTAAAATaGGCTCTATCTAGGGTCTTC +
Preference number: 2 (lower is better)
Translates to: NTPSILPDLLRLLYTITRLGGVK*ALSRVF
Trigger: GAAGACCCTAGATAGAGCTCATTTTACTCCACCTAA...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGATTTTCTGCCTGTGGTTaGAATGTCATTGAAAATGAG +
Preference number: 2 (lower is better)
Translates to: PKSSPISQTANYLFFVQRFSACG*NVIENE
Trigger: CTCATTTTCAATGACATTTCAACCACAGGCAGAAAA...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR GCA 90 bp ATCCTTCAGATTCTGGATAGTAATGTTTCCAATACTGCACGCCATCACATAACTAGGCAAAATTACAGATaGCAGTGGATCCACTTGTCC +
Preference number: 2 (lower is better)
Translates to: ILQILDSNVSNTARHHITRQNYR*QWIHLS
Trigger: GGACAAGTGGATCCACTGGCATCTGTAATTTTGCCT...AGTTATGTGATGGCGTGCAGTATTGGAAACATTACTATCCAGAATCTGAAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540208.1
3UTR-3UTR CCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGATTCTTAAACAACTCCTaGGAGGTCCAGAATGATGGA +
Preference number: 2 (lower is better)
Translates to: NTPSILPDLLRLLYTITRFLNNS*EVQNDG
Trigger: TCCATCATTCTGGACCTCCCAGGAGTTGTTTAAGAA...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTTTCTTAAACAACTCCTaGGAGGTCCAGAATGATGGA +
Preference number: 2 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIFLNNS*EVQNDG
Trigger: TCCATCATTCTGGACCTCCCAGGAGTTGTTTAAGAA...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAAGCTTCTGTGGCTACTaGGTCATGTTACTCTCAGTA +
Preference number: 2 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLSFCGY*VMLLSV
Trigger: TACTGAGAGTAACATGACTCAGTAGCCACAGAAGCT...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAAGCTTCTGTGGCTACTaGGTCATGTTACTCTCAGTA +
Preference number: 2 (lower is better)
Translates to: KKLHGLHHLRTITMWSPISFCGY*VMLLSV
Trigger: TACTGAGAGTAACATGACTCAGTAGCCACAGAAGCT...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTAGCTTCTGTGGCTACTaGGTCATGTTACTCTCAGTA +
Preference number: 2 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSSFCGY*VMLLSV
Trigger: TACTGAGAGTAACATGACTCAGTAGCCACAGAAGCT...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTACTGGGAGGTCCAGAATaGTGGAACATCAACACTAAA +
Preference number: 2 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLLGGPE*WNINTK
Trigger: TTTAGTGTTGATGTTCCATCATTCTGGACCTCCCAG...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAACCTTATCAATGACCTaGTGGACAGGGATGATTGAT +
Preference number: 2 (lower is better)
Translates to: KKLHGLHHLRTITMWSPITLSMT*WTGMID
Trigger: ATCAATCATCCCTGTCCATCAGGTCATTGATAAGGT...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000296932.13
3UTR-3UTR TCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTTGTTACTCTCAGTACTaGAGTTTTAGTGATGACAAC +
Preference number: 2 (lower is better)
Translates to: ALRPISKKLHGLHHLRTICYSQY*SFSDDN
Trigger: GTTGTCATCACTAAAACTTCAGTACTGAGAGTAACA...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATACCCTTGTCTCTAATTTaGATGTCTCCCCTGCATTAT +
Preference number: 2 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIPLSLI*MSPLHY
Trigger: ATAATGCAGGGGAGACATTCAAATTAGAGACAAGGG...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTCCCTTGTCTCTAATTTaGATGTCTCCCCTGCATTAT +
Preference number: 2 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSPLSLI*MSPLHY
Trigger: ATAATGCAGGGGAGACATTCAAATTAGAGACAAGGG...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATATTAGGTGGAGTAAAATaGGCTCTATCTAGGGTCTTC +
Preference number: 2 (lower is better)
Translates to: KKLHGLHHLRTITMWSPILGGVK*ALSRVF
Trigger: GAAGACCCTAGATAGAGCTCATTTTACTCCACCTAA...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGATTTTCTGCCTGTGGTTaGAATGTCATTGAAAATGAG +
Preference number: 2 (lower is better)
Translates to: NTPSILPDLLRLLYTITRFSACG*NVIENE
Trigger: CTCATTTTCAATGACATTTCAACCACAGGCAGAAAA...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR GCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTGTAAACAGTCTTTTCTaGCTGTGGTTGAAATGTCAT +
Preference number: 2 (lower is better)
Translates to: ECLLFLSLNAVASQNLILVNSLF*LWLKCH
Trigger: ATGACATTTCAACCACAGGCAGAAAAGACTGTTTAC...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR GCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTACCACTGCATACAGCTTaGCTAATGGAAATTCTCCTT +
Preference number: 2 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLPLHTA*LMEILL
Trigger: AAGGAGAATTTCCATTAGGCAAGCTGTATGCAGTGG...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAAAGTAACACTGGAATaGGATTTGTGGGCATTCAAA +
Preference number: 2 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFKVTLE*DLWAFK
Trigger: TTTGAATGCCCACAAATCCCATTCCAGTGTTACTTT...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTATTCTTAAACAACTCCTaGGAGGTCCAGAATGATGGA +
Preference number: 2 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLFLNNS*EVQNDG
Trigger: TCCATCATTCTGGACCTCCCAGGAGTTGTTTAAGAA...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTTCACTTCATATTCCTTaGAACAAAACTCTCAATGGG +
Preference number: 2 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFSLHIP*NKTLNG
Trigger: CCCATTGAGAGTTTTGTTCCAAGGAATATGAAGTGA...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATATTGTATGCAGCAGCCTaGTCCATAAATAATACACCA +
Preference number: 2 (lower is better)
Translates to: KKLHGLHHLRTITMWSPILYAAA*SINNTP
Trigger: TGGTGTATTATTTATGGATCAGGCTGCTGCATACAA...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATATTACTCAGAATAGTCTaGGAGTTAGGTAAGCTGCAT +
Preference number: 2 (lower is better)
Translates to: KKLHGLHHLRTITMWSPILLRIV*ELGKLH
Trigger: ATGCAGCTTACCTAACTCTCAGACTATTCTGAGTAA...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR GCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGTTGCAGTTTACACTaGTTGCAAATCTTCACATTT +
Preference number: 2 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFSCSLH*LQIFTF
Trigger: AAATGTGAAGATTTGCAAGCAGTGTAAACTGCAACT...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTGATATAACGATTAGGTaGAGTAAAATGAGCTCTATC +
Preference number: 2 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFDITIR*SKMSSI
Trigger: GATAGAGCTCATTTTACTCCACCTAATCGTTATATC...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTGATATAACGATTAGGTaGAGTAAAATGAGCTCTATC +
Preference number: 2 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIDITIR*SKMSSI
Trigger: GATAGAGCTCATTTTACTCCACCTAATCGTTATATC...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTGATATAACGATTAGGTaGAGTAAAATGAGCTCTATC +
Preference number: 2 (lower is better)
Translates to: ECLLFLSLNAVASQNLILDITIR*SKMSSI
Trigger: GATAGAGCTCATTTTACTCCACCTAATCGTTATATC...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATATGTTACTCTCAGTACTaGAGTTTTAGTGATGACAAC +
Preference number: 2 (lower is better)
Translates to: KKLHGLHHLRTITMWSPICYSQY*SFSDDN
Trigger: GTTGTCATCACTAAAACTTCAGTACTGAGAGTAACA...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTTGTTACTCTCAGTACTaGAGTTTTAGTGATGACAAC +
Preference number: 2 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSCYSQY*SFSDDN
Trigger: GTTGTCATCACTAAAACTTCAGTACTGAGAGTAACA...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR GCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAAGCTGCATAATAGTATaGAAGGTTTGTATGCAGCAG +
Preference number: 2 (lower is better)
Translates to: RTITMWSPIHSLASKHYSSCIIV*KVCMQQ
Trigger: CTGCTGCATACAAACCTTGCATACTATTATGCAGCT...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR CAA 90 bp ATATGTAACCTCCGCCAAAATAAGCAGCCTGTTAATATATGCCTATaGAAAAGGATTTGGCTCAGTGACCTTAGATTTACTATCTTACTT +
Preference number: 2 (lower is better)
Translates to: ICNLRQNKQPVNICL*KRIWLSDLRFTILL
Trigger: AAGTAAGATAGTAAATCTAAGGTCACTGAGCCAAATCCTTTTCAATAGGCATATATTAACAGGCTGCTTATTTTGGCGGAGGTTACATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR TCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCATTTTCTGCCTGTGGTTaGAATGTCATTGAAAATGAG +
Preference number: 2 (lower is better)
Translates to: RTITMWSPIHSLASKHYSFSACG*NVIENE
Trigger: CTCATTTTCAATGACATTTCAACCACAGGCAGAAAA...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR GCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAAGTTGCAGTTTACACTaGTTGCAAATCTTCACATTT +
Preference number: 2 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLSCSLH*LQIFTF
Trigger: AAATGTGAAGATTTGCAAGCAGTGTAAACTGCAACT...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR GCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAAGTTGCAGTTTACACTaGTTGCAAATCTTCACATTT +
Preference number: 2 (lower is better)
Translates to: KKLHGLHHLRTITMWSPISCSLH*LQIFTF
Trigger: AAATGTGAAGATTTGCAAGCAGTGTAAACTGCAACT...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAAAAGTAACACTGGAATaGGATTTGTGGGCATTCAAA +
Preference number: 2 (lower is better)
Translates to: RTITMWSPIHSLASKHYSKVTLE*DLWAFK
Trigger: TTTGAATGCCCACAAATCCCATTCCAGTGTTACTTT...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR CCA 72 bp TTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTaGACTTTGCCTTTAAGCAGATTGGCTTTGCCAGAA +
Preference number: 3 (lower is better)
Translates to: FVQRERPLGSRF*TLPLSRLALPE
Trigger: TTCTGGCAAAGCCAATCTGCTTAAAGGCAAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CAA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAAATACACCATCTATCTaGCCAGACCTCCTCAGGCTC +
Preference number: 3 (lower is better)
Translates to: PKSSPISQTANYLFFVQRNTPSI*PDLLRL
Trigger: GAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CAA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTTTAAGCAGATTGGCTTaGCCAGAATGTCTCCTTTTC +
Preference number: 3 (lower is better)
Translates to: LPVFRAERKASRFQVLDFLSRLA*PECLLF
Trigger: GAAAAGGAGACATTCTGGCAAAGCCAATCTGCTTAA...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CAA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTTGCAGTTTACACTGCTaGCAAATCTTCACATTTCTG +
Preference number: 3 (lower is better)
Translates to: LPVFRAERKASRFQVLDFCSLHC*QIFTFL
Trigger: CAGAAATGTGAAGATTTGCAAGCAGTGTAAACTGCA...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CAA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTAATACACCATCTATCTaGCCAGACCTCCTCAGGCTC +
Preference number: 3 (lower is better)
Translates to: ECLLFLSLNAVASQNLILNTPSI*PDLLRL
Trigger: GAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CAA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGATGCAGTTTACACTGCTaGCAAATCTTCACATTTCTG +
Preference number: 3 (lower is better)
Translates to: PKSSPISQTANYLFFVQRCSLHC*QIFTFL
Trigger: CAGAAATGTGAAGATTTGCAAGCAGTGTAAACTGCA...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CAA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTTCCACTGCATACAGCTaGCCTAATGGAAATTCTCCT +
Preference number: 3 (lower is better)
Translates to: ECLLFLSLNAVASQNLILSTAYS*PNGNSP
Trigger: AGGAGAATTTCCATTAGGCAAGCTGTATGCAGTGGA...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CAA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTTCCACTGCATACAGCTaGCCTAATGGAAATTCTCCT +
Preference number: 3 (lower is better)
Translates to: ALRPISKKLHGLHHLRTISTAYS*PNGNSP
Trigger: AGGAGAATTTCCATTAGGCAAGCTGTATGCAGTGGA...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CAA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGACTCACTTCATATTCCTaGGAACAAAACTCTCAATGG +
Preference number: 3 (lower is better)
Translates to: PKSSPISQTANYLFFVQRLTSYS*EQNSQW
Trigger: CCATTGAGAGTTTTGTTCCAAGGAATATGAAGTGAG...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CAA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTTCCCTTGTCTCTAATTaGAATGTCTCCCCTGCATTA +
Preference number: 3 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFSLVSN*NVSPAL
Trigger: TAATGCAGGGGAGACATTCAAATTAGAGACAAGGGA...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CAA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTTGCAGTTTACACTGCTaGCAAATCTTCACATTTCTG +
Preference number: 3 (lower is better)
Translates to: ALRPISKKLHGLHHLRTICSLHC*QIFTFL
Trigger: CAGAAATGTGAAGATTTGCAAGCAGTGTAAACTGCA...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CAA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAACACTGGAATGGGATTaGTGGGCATTCAAAATAGTT +
Preference number: 3 (lower is better)
Translates to: NTPSILPDLLRLLYTITRTLEWD*WAFKIV
Trigger: AACTATTTTGAATGCCCACAAATCCCATTCCAGTGT...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CAA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTACACTGGAATGGGATTaGTGGGCATTCAAAATAGTT +
Preference number: 3 (lower is better)
Translates to: ALRPISKKLHGLHHLRTITLEWD*WAFKIV
Trigger: AACTATTTTGAATGCCCACAAATCCCATTCCAGTGT...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CAA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTACACTGGAATGGGATTaGTGGGCATTCAAAATAGTT +
Preference number: 3 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFTLEWD*WAFKIV
Trigger: AACTATTTTGAATGCCCACAAATCCCATTCCAGTGT...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CAA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTATCCACTGCATACAGCTaGCCTAATGGAAATTCTCCT +
Preference number: 3 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLSTAYS*PNGNSP
Trigger: AGGAGAATTTCCATTAGGCAAGCTGTATGCAGTGGA...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CAA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTCTCACTTCATATTCCTaGGAACAAAACTCTCAATGG +
Preference number: 3 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFLTSYS*EQNSQW
Trigger: CCATTGAGAGTTTTGTTCCAAGGAATATGAAGTGAG...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR TCA 72 bp CTGCATAATAGTATGCAAGGTTTGTATGCAGCAGCCTaGTCCATAAATAATACACCATCTATCTTGCCAGAC +
Preference number: 3 (lower is better)
Translates to: LHNSMQGLYAAA*SINNTPSILPD
Trigger: GTCTGGCAAGATAGATGGTGTATTATTTATGGATCAGGCTGCTGCATACAAACCTTGCATACTATTATGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR CCA 72 bp AGTAGAGGTGTAAGAGATTCATTCTTAAACAACTCCTaGGAGGTCCAGAATGATGGAACATCAACACTAAAC +
Preference number: 3 (lower is better)
Translates to: SRGVRDSFLNNS*EVQNDGTSTLN
Trigger: GTTTAGTGTTGATGTTCCATCATTCTGGACCTCCCAGGAGTTGTTTAAGAATGAATCTCTTACACCTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR CCA 72 bp ATTATGACTCACCCATATGTCTCACTTCATATTCCTTaGAACAAAACTCTCAATGGGGAAATACGAGGCTTT +
Preference number: 3 (lower is better)
Translates to: IMTHPYVSLHIP*NKTLNGEIRGF
Trigger: AAAGCCTCGTATTTCCCCATTGAGAGTTTTGTTCCAAGGAATATGAAGTGAGACATATGGGTGAGTCATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CAA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACATGCAGTTTACACTGCTaGCAAATCTTCACATTTCTG +
Preference number: 3 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTCSLHC*QIFTFL
Trigger: CAGAAATGTGAAGATTTGCAAGCAGTGTAAACTGCA...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR TCA 72 bp AGATTCATTCTTAAACAACTCCTGGGAGGTCCAGAATaGTGGAACATCAACACTAAACTTAACTCGAATGTA +
Preference number: 3 (lower is better)
Translates to: RFILKQLLGGPE*WNINTKLNSNV
Trigger: TACATTCGAGTTAAGTTTAGTGTTGATGTTCCATCATTCTGGACCTCCCAGGAGTTGTTTAAGAATGAATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR-3UTR CAA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCACTCACTTCATATTCCTaGGAACAAAACTCTCAATGG +
Preference number: 3 (lower is better)
Translates to: RTITMWSPIHSLASKHYSLTSYS*EQNSQW
Trigger: CCATTGAGAGTTTTGTTCCAAGGAATATGAAGTGAG...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCCCGCTCTGCTGCCGCTaGTCCACCCAGGGGGAACCC +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTPLCCR*STQGEP
Trigger: GGGTTCCCCCTGGGTGGAGCAGCGGCAGCAGAGCGG...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTGCGCAAGGTGAACCCTaGGCGCGGCAGCGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFAQGEP*ARQRSA
Trigger: CGCTGAACGCTGCCGCGCCCAGGGTTCACCTTGCGC...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCGCGCAAGGTGAACCCTaGGCGCGGCAGCGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTAQGEP*ARQRSA
Trigger: CGCTGAACGCTGCCGCGCCCAGGGTTCACCTTGCGC...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTCCCGACGGCGCAAGGTaGACCCTGGGCGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIPDGAR*TLGAAA
Trigger: CGCTGCCGCGCCCAGGGTTCACCTTGCGCCGTCGGG...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTGTTCAGCGCAGGGCCTaGGGACGAGGAAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFVQRRA*GRGSRL
Trigger: CAGCCTGCTTCCTCGTCCGCAGGCCCTGCGCTGAAC...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGACTTTCCCGCTCTGCTaGCGCTGCTCCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLTFPLC*RCSTQG
Trigger: CCCCTGGGTGGAGCAGCGGCAGCAGAGCGGGAAAGT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAGACGAGGAAGCAGGCTaGCGGCAGGTCCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRDEEAG*RQVPPR
Trigger: GCGAGGAGGGACCTGCCGCCAGCCTGCTTCCTCGTC...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTGTGAGGGCGAGAAGCTaGGGAAGTAGGGTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFVRARS*GSRVCV
Trigger: CACGCACACCCTACTTCCTCAGCTTCTCGCCCTCAC...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAGTTCAGCGCAGGGCCTaGGGACGAGGAAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRVQRRA*GRGSRL
Trigger: CAGCCTGCTTCCTCGTCCGCAGGCCCTGCGCTGAAC...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAACTTTCCCGCTCTGCTaGCGCTGCTCCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRTFPLC*RCSTQG
Trigger: CCCCTGGGTGGAGCAGCGGCAGCAGAGCGGGAAAGT...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCGCTGGCCAGTTCTGCTaGTGGGAGCGGGATCAGGTA +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTAGQFC*WERDQV
Trigger: TACCTGATCCCGCTCCCAGCAGCAGAACTGGCCAGC...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGACAGCTGGCCAGTTCTaGTGCTGGGAGCGGGATCAG +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLTAGQF*CWERDQ
Trigger: CTGATCCCGCTCCCAGCAGCAGAACTGGCCAGCTGT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTTCCTCGCAGGGAAGTTaGCAGGGTGAGGGCGAGAAG +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFSSQGS*QGEGEK
Trigger: CTTCTCGCCCTCACCCTGCCAACTTCCCTGCGAGGA...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCCGCCGAGGTCCCCTTTaGCCGCAAGATCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTRRGPL*PQDHPP
Trigger: TGGAGGATGATCTTGCGGCCAAAGGGGACCTCGGCG...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTCGCCGAGGTCCCCTTTaGCCGCAAGATCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFRRGPL*PQDHPP
Trigger: TGGAGGATGATCTTGCGGCCAAAGGGGACCTCGGCG...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAACCACTTTCCCGCTCTaGTGCCGCTGCTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRTTFPL*CRCSTQ
Trigger: CTGGGTGGAGCAGCGGCAGCAGAGCGGGAAAGTGGT...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCCTCGGAGCGTCCACATaGAAGCCTGGCTGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTLGAST*KPGCLG
Trigger: ACCCAAACAGCCAGGCTTGCATGTGGACGCTCCGAG...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAGACGAGGAAGCAGGCTaGCGGCAGGTCCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRDEEAG*RQVPPR
Trigger: GCGAGGAGGGACCTGCCGCCAGCCTGCTTCCTCGTC...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTGACGAGGAAGCAGGCTaGCGGCAGGTCCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILDEEAG*RQVPPR
Trigger: GCGAGGAGGGACCTGCCGCCAGCCTGCTTCCTCGTC...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTGCGCAAGGTGAACCCTaGGCGCGGCAGCGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIAQGEP*ARQRSA
Trigger: CGCTGAACGCTGCCGCGCCCAGGGTTCACCTTGCGC...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTACAACCCTCCCCCGTaGAAGCCAAGCTGGGTAATG +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTYNPPP*KPSWVM
Trigger: CATTACCCAGCTTGGCTTTCACGGGGGAGGGTTGTA...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTGTTCAGCGCAGGGCCTaGGGACGAGGAAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFVQRRA*GRGSRL
Trigger: CAGCCTGCTTCCTCGTCCGCAGGCCCTGCGCTGAAC...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAACTTTCCCGCTCTGCTaGCGCTGCTCCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRTFPLC*RCSTQG
Trigger: CCCCTGGGTGGAGCAGCGGCAGCAGAGCGGGAAAGT...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTACTTTCCCGCTCTGCTaGCGCTGCTCCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFTFPLC*RCSTQG
Trigger: CCCCTGGGTGGAGCAGCGGCAGCAGAGCGGGAAAGT...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGCTCTCAGGGTCCGGTTaGTTCTCTTGCCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLLSGSG*FSCHSS
Trigger: GGAGGAATGGCAAGAGAAGCAACCGGACCCTGAGAG...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCCTCTCAGGGTCCGGTTaGTTCTCTTGCCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTLSGSG*FSCHSS
Trigger: GGAGGAATGGCAAGAGAAGCAACCGGACCCTGAGAG...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTACCACCCTAGGTACTTaGGTCCCCCTCGCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTITTLGT*VPLAGA
Trigger: TGCGCCCGCGAGGGGGACCCAAGTACCTAGGGTGGT...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000367608.6
CDS-3UTR CCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTACCACCCTAGGTACTTaGGTCCCCCTCGCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILTTLGT*VPLAGA
Trigger: TGCGCCCGCGAGGGGGACCCAAGTACCTAGGGTGGT...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000367608.6
CDS-3UTR CCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAGGCCAGTTCTGCTGCTaGGAGCGGGATCAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRGQFCC*ERDQVG
Trigger: TCCTACCTGATCCCGCTCCCAGCAGCAGAACTGGCC...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTGGCACATCCCCACACTaGGTGAGGAACACACATGAT +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFGTSPH*VRNTHD
Trigger: ATCATGTGTGTTCCTCACTCAGTGTGGGGATGTGCC...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGACAGGGATGATACGCTaGGAGCCAAGTTCCGAGTTG +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLTGMIR*EPSSEL
Trigger: CAACTCGGAACTTGGCTCTCAGCGTATCATCCCTGT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTACCACTTTCCCGCTCTaGTGCCGCTGCTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILTTFPL*CRCSTQ
Trigger: CTGGGTGGAGCAGCGGCAGCAGAGCGGGAAAGTGGT...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTACCACTTTCCCGCTCTaGTGCCGCTGCTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTITTFPL*CRCSTQ
Trigger: CTGGGTGGAGCAGCGGCAGCAGAGCGGGAAAGTGGT...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAACCACTTTCCCGCTCTaGTGCCGCTGCTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRTTFPL*CRCSTQ
Trigger: CTGGGTGGAGCAGCGGCAGCAGAGCGGGAAAGTGGT...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAGACGAGGAAGCAGGCTaGCGGCAGGTCCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLDEEAG*RQVPPR
Trigger: GCGAGGAGGGACCTGCCGCCAGCCTGCTTCCTCGTC...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAGCGCAAGGTGAACCCTaGGCGCGGCAGCGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIAQGEP*ARQRSA
Trigger: CGCTGAACGCTGCCGCGCCCAGGGTTCACCTTGCGC...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGAGGTCCCAGAAGGGTTaGACAAAACCACTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLRSQKG*TKPLGS
Trigger: ACTGCCGAGTGGTTTTGTCCAACCCTTCTGGGACCT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGCCAGTAGTAGCCTTTaGGTTCCTCCATGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLASSSL*VPPWQD
Trigger: GTCTTGCCATGGAGGAACCCAAAGGCTACTACTGGC...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTGTGAGGGCGAGAAGCTaGGGAAGTAGGGTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILVRARS*GSRVCV
Trigger: CACGCACACCCTACTTCCTCAGCTTCTCGCCCTCAC...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAGTGAGGGCGAGAAGCTaGGGAAGTAGGGTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRVRARS*GSRVCV
Trigger: CACGCACACCCTACTTCCTCAGCTTCTCGCCCTCAC...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGAGCGAAACATCATGTTaGCATTACTGCGCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLSETSC*HYCAEV
Trigger: GACCTCGGCGCAGTAATGTCAACATGATGTTTCGCT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCGTGTGCAACACATCCTaGCGTGTTCCATCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTVCNTS*RVPSSK
Trigger: TTTGGAGGATGGAACACGTCAGGATGTGTTGCACAC...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCAGCATGGGCCAGTTTTaGCAAGGACTTGTCCATGGA +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTSMGQF*QGLVHG
Trigger: TCCATGGACAAGTCCTTGTCAAAACTGGCCCATGCT...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGGGATGATTGATGTTTaGTCTCCATCAGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLGMIDV*SPSAWA
Trigger: GGCCCATGCTGATGGAGATCAAACATCAATCATCCC...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAGTTCAGCGCAGGGCCTaGGGACGAGGAAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTVQRRA*GRGSRL
Trigger: CAGCCTGCTTCCTCGTCCGCAGGCCCTGCGCTGAAC...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTGCTGGCCAGTTCTGCTaGTGGGAGCGGGATCAGGTA +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILAGQFC*WERDQV
Trigger: TACCTGATCCCGCTCCCAGCAGCAGAACTGGCCAGC...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTACAGCTGGCCAGTTCTaGTGCTGGGAGCGGGATCAG +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFTAGQF*CWERDQ
Trigger: CTGATCCCGCTCCCAGCAGCAGAACTGGCCAGCTGT...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTCCGGTTGCTTCTCTTaGCATTCCTCCCACAGATCT +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTSGCFS*HSSHRS
Trigger: AGATCTGTGGGAGGAATGGCAAGAGAAGCAACCGGA...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGCCTTTACGCCGTTTCTaGAGAGTTCATGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLPLRRF*RVHGLS
Trigger: GGAAAGCCCATGAACTCTCCAGAAACGGCGTAAAGG...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTCCTTTACGCCGTTTCTaGAGAGTTCATGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFPLRRF*RVHGLS
Trigger: GGAAAGCCCATGAACTCTCCAGAAACGGCGTAAAGG...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTCGCCGAGGTCCCCTTTaGCCGCAAGATCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILRRGPL*PQDHPP
Trigger: TGGAGGATGATCTTGCGGCCAAAGGGGACCTCGGCG...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCAGAACAGGAGAGGACTaGGCTTCCATTTCCAATGGC +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTRTGED*ASISNG
Trigger: GCCATTGGAAATGGAAGCCCAGTCCTCTCCTGTTCT...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAGGCCAGTTCTGCTGCTaGGAGCGGGATCAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRGQFCC*ERDQVG
Trigger: TCCTACCTGATCCCGCTCCCAGCAGCAGAACTGGCC...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR CAA 72 bp CAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTaGCCTTTAAGCAGATTGGCTTTGCCAGAATGTCTC +
Preference number: 4 (lower is better)
Translates to: QRERPLGSRFWT*PLSRLALPECL
Trigger: GAGACATTCTGGCAAAGCCAATCTGCTTAAAGGCAAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAGGCACATCCCCACACTaGGTGAGGAACACACATGAT +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRGTSPH*VRNTHD
Trigger: ATCATGTGTGTTCCTCACTCAGTGTGGGGATGTGCC...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTTTTGGAAGGTTGAATTaGGCCATTCTGCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFFGRLN*AILPPC
Trigger: GCAAGGTGGCAGAATGGCTCAATTCAACCTTCCAAA...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGAACTCCAAAGTGTGTaGAGTGGTTACACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLELQSV*SGYTGR
Trigger: TCTGCCTGTGTAACCACTTCACACACTTTGGAGTTC...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTTGCCGCCACTGTTTCTaGACATTCTCCTTCATAGCA +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFCRHCF*TFSFIA
Trigger: TGCTATGAAGGAGAATGTTCAGAAACAGTGGCGGCA...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGATACACCATCTATCTTaGCAGACCTCCTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLIHHLS*QTSSGS
Trigger: AGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTAT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCATACACCATCTATCTTaGCAGACCTCCTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTIHHLS*QTSSGS
Trigger: AGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTAT...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGCTTTGGGTTCCTCCATaGCAAGACAATGACCCAGTT +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLLWVPP*QDNDPV
Trigger: AACTGGGTCATTGTCTTGCCATGGAGGAACCCAAAG...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCAGAAGGTTGGATAGATaGCCAGTAGTAGCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTRRLDR*PVVAFG
Trigger: CCCAAAGGCTACTACTGGCCATCTATCCAACCTTCT...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTCTTGTCTCCCAGGATaGTGTTGCAGGATGTTGCAA +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTSCLPG*CCRMLQ
Trigger: TTGCAACATCCTGCAACACCATCCTGGGAGACAAGA...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTTCTTGTCTCCCAGGATaGTGTTGCAGGATGTTGCAA +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFSCLPG*CCRMLQ
Trigger: TTGCAACATCCTGCAACACCATCCTGGGAGACAAGA...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAGTGAGGGCGAGAAGCTaGGGAAGTAGGGTGTGCGTG +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLVRARS*GSRVCV
Trigger: CACGCACACCCTACTTCCTCAGCTTCTCGCCCTCAC...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCCATCCCCACACTGAGTaGGGAACACACATGATATAT +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTHPHTE*GTHMIY
Trigger: ATATATCATGTGTGTTCCTCACTCAGTGTGGGGATG...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGCATCCCCACACTGAGTaGGGAACACACATGATATAT +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLHPHTE*GTHMIY
Trigger: ATATATCATGTGTGTTCCTCACTCAGTGTGGGGATG...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGCTTTCACATTACAGCTaGGGTTGGAGAGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLLSHYS*GWRGFW
Trigger: CCAAAATCCTCTCCAACCTCAGCTGTAATGTGAAAG...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AAGAACTACCGTGCTGCACGTATAACCCTGGGAAGGCTGATAACATGTAGCTTTTTTGGAAGGTTGAATTaGGCCATTCTGCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: KNYRAARITLGRLITCSFFGRLN*AILPPC
Trigger: GCAAGGTGGCAGAATGGCTCAATTCAACCTTCCAAA...AAAGCTACATGTTATCAGCCTTCCCAGGGTTATACGTGCAGCACGGTAGTTCTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000508295.2
CDS-3UTR TCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTTGTCTCACTTGCATCTaGATCTCTGTGTGCAACACA +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFCLTCI*ISVCNT
Trigger: TGTGTTGCACACAGAGATTCAGATGCAAGTGAGACA...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGTGTCTCACTTGCATCTaGATCTCTGTGTGCAACACA +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLCLTCI*ISVCNT
Trigger: TGTGTTGCACACAGAGATTCAGATGCAAGTGAGACA...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTAGAGCAATGTACATGTaGATTGCTTCTAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFRAMYM*IASSPI
Trigger: GATGGGGCTAGAAGCAATTCACATGTACATTGCTCT...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCGAAGCACTGTCTGAGTaGTCCACTTTTGTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTEALSE*STFVEG
Trigger: TCCTTCAACAAAAGTGGATCACTCAGACAGTGCTTC...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000296932.13
CDS-3UTR TCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGATGGACAGGGATGATTaGTGTTTGATCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLMDRDD*CLISIS
Trigger: GCTGATGGAGATCAAACATCAATCATCCCTGTCCAT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTCCTGATGGACAGGGATaGTTGATGTTTGATCTCCAT +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFPDGQG*LMFDLH
Trigger: ATGGAGATCAAACATCAATCATCCCTGTCCATCAGG...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTAAGCACAGCATGCACTaGGACCGATTTCTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFKHSMH*DRFLRN
Trigger: GTTTCTTAGAAATCGGTCTCAGTGCATGCTGTGCTT...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGAAGCACAGCATGCACTaGGACCGATTTCTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLKHSMH*DRFLRN
Trigger: GTTTCTTAGAAATCGGTCTCAGTGCATGCTGTGCTT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGATTGCCTCCCAGAACCTaGTACTTCCCAGATAACCCA +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRLPPRT*YFPDNP
Trigger: TGGGTTATCTGGGAAGTATCAGGTTCTGGGAGGCAA...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGAGGCAAATAGCTTCCTaGTTGAAGCTCAGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLRQIAS*LKLSKR
Trigger: CCTTTTGCTGAGCTTCAATCAGGAAGCTATTTGCCT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTAGGCAAATAGCTTCCTaGTTGAAGCTCAGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFRQIAS*LKLSKR
Trigger: CCTTTTGCTGAGCTTCAATCAGGAAGCTATTTGCCT...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTGCTGGCCAGTTCTGCTaGTGGGAGCGGGATCAGGTA +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSAGQFC*WERDQV
Trigger: TACCTGATCCCGCTCCCAGCAGCAGAACTGGCCAGC...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAGCTGGCCAGTTCTGCTaGTGGGAGCGGGATCAGGTA +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIAGQFC*WERDQV
Trigger: TACCTGATCCCGCTCCCAGCAGCAGAACTGGCCAGC...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAACAGCTGGCCAGTTCTaGTGCTGGGAGCGGGATCAG +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLTAGQF*CWERDQ
Trigger: CTGATCCCGCTCCCAGCAGCAGAACTGGCCAGCTGT...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCAGGCAAAATTACAGATaGCAGTGGATCCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTRQNYR*QWIHLS
Trigger: GGACAAGTGGATCCACTGGCATCTGTAATTTTGCCT...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGAGGCAAAATTACAGATaGCAGTGGATCCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLRQNYR*QWIHLS
Trigger: GGACAAGTGGATCCACTGGCATCTGTAATTTTGCCT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGTTCCTCCCACAGATCTaGACCATTACCACAATGAAC +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLFLPQI*TITTMN
Trigger: GTTCATTGTGGTAATGGTGCAGATCTGTGGGAGGAA...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCGGTCTTCCTCAGCATTaGTTCTCCCTTGTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTGLPQH*FSLVSN
Trigger: ATTAGAGACAAGGGAGAAGCAATGCTGAGGAAGACC...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTATCCTCGCAGGGAAGTTaGCAGGGTGAGGGCGAGAAG +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLSSQGS*QGEGEK
Trigger: CTTCTCGCCCTCACCCTGCCAACTTCCCTGCGAGGA...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACATCCTCGCAGGGAAGTTaGCAGGGTGAGGGCGAGAAG +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTSSQGS*QGEGEK
Trigger: CTTCTCGCCCTCACCCTGCCAACTTCCCTGCGAGGA...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGACCTTTACGCCGTTTCTaGAGAGTTCATGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRPLRRF*RVHGLS
Trigger: GGAAAGCCCATGAACTCTCCAGAAACGGCGTAAAGG...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGCTTCATGGCCAACTTTaGTTGCTTCAAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLLHGQL*LLQSRV
Trigger: CACTCTGCTTTGAAGCAACCAAAGTTGGCCATGAAG...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCCTTCATGGCCAACTTTaGTTGCTTCAAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTLHGQL*LLQSRV
Trigger: CACTCTGCTTTGAAGCAACCAAAGTTGGCCATGAAG...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAGGCCAGTTCTGCTGCTaGGAGCGGGATCAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIGQFCC*ERDQVG
Trigger: TCCTACCTGATCCCGCTCCCAGCAGCAGAACTGGCC...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTAAAGCCAGGCTTGTCTaGACAAGGAAGAACGTATTC +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFKARLV*TRKNVF
Trigger: GAATACGTTCTTCCTTGTCCAGACAAGCCTGGCTTT...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTTATCTCATCATCTGCTaGAGCCAGGCAAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFYLIIC*SQANSF
Trigger: GAAGCTATTTGCCTGGCTCCAGCAGATGATGAGATA...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAGGCACATCCCCACACTaGGTGAGGAACACACATGAT +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRGTSPH*VRNTHD
Trigger: ATCATGTGTGTTCCTCACTCAGTGTGGGGATGTGCC...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCGGTAAAATGACCTTTTaGTTCCTTAAGGACACGGCA +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTGKMTF*FLKDTA
Trigger: TGCCGTGTCCTTAAGGAATCAAAAGGTCATTTTACC...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGATTTGGAAGGTTGAATTaGGCCATTCTGCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRFGRLN*AILPPC
Trigger: GCAAGGTGGCAGAATGGCTCAATTCAACCTTCCAAA...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAGGGATGATACGCTaGGAGCCAAGTTCCGAGTTG +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTITGMIR*EPSSEL
Trigger: CAACTCGGAACTTGGCTCTCAGCGTATCATCCCTGT...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GGTCCTACATCCTGGAAAAGTCCAGTTTTGTTGAAGAAAGTAAACTGTGCTCTTACAGGGATGATACGCTaGGAGCCAAGTTCCGAGTTG +
Preference number: 4 (lower is better)
Translates to: GPTSWKSPVLLKKVNCALTGMIR*EPSSEL
Trigger: CAACTCGGAACTTGGCTCTCAGCGTATCATCCCTGT...AAGAGCACAGTTTACTTTCTTCAACAAAACTGGACTTTTCCAGGATGTAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540208.1
CDS-3UTR TCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTGCAAACCCCAGCCAATaGTGCAGAATTTTAGAATGT +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFANPSQ*CRILEC
Trigger: ACATTCTAAAATTCTGCATCATTGGCTGGGGTTTGC...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCGCACCATTACCACAATaGACATGGCAATGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTAPLPQ*TWQCSE
Trigger: TTCTGAACATTGCCATGTTCATTGTGGTAATGGTGC...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTCCCTTGTCTCTAATTTaGATGTCTCCCCTGCATTAT +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFPLSLI*MSPLHY
Trigger: ATAATGCAGGGGAGACATTCAAATTAGAGACAAGGG...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGTTAGGTGGAGTAAAATaGGCTCTATCTAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLLGGVK*ALSRVF
Trigger: GAAGACCCTAGATAGAGCTCATTTTACTCCACCTAA...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTCTCGGAGCGTCCACATaGAAGCCTGGCTGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSLGAST*KPGCLG
Trigger: ACCCAAACAGCCAGGCTTGCATGTGGACGCTCCGAG...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTACTCGGAGCGTCCACATaGAAGCCTGGCTGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLLGAST*KPGCLG
Trigger: ACCCAAACAGCCAGGCTTGCATGTGGACGCTCCGAG...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTTCCAGAAGTCATTTTaGCAGTCGACTACATTCCCT +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTFQKSF*QSTTFP
Trigger: AGGGAATGTAGTCGACTGGCAAAATGACTTCTGGAA...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCAACCACAGCTTAGGTTaGTTTCAGCTTTCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTNHSLG*FQLSEL
Trigger: TAGCTCTGAAAGCTGAAAGCAACCTAAGCTGTGGTT...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGCCACTGCATACAGCTTaGCTAATGGAAATTCTCCTT +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLPLHTA*LMEILL
Trigger: AAGGAGAATTTCCATTAGGCAAGCTGTATGCAGTGG...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCAATGGAGGTGAGAACTaGATGCTTAGAACTGACAAC +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTNGGEN*MLRTDN
Trigger: GTTGTCAGTTCTAAGCATGCAGTTCTCACCTCCATT...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAAACCACTCGGCAGTTaGCACATCCCCACACTGAGT +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFKPLGS*HIPTLS
Trigger: ACTCAGTGTGGGGATGTGCCAACTGCCGAGTGGTTT...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAAGGTCCCAGAAGGGTTaGACAAAACCACTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRRSQKG*TKPLGS
Trigger: ACTGCCGAGTGGTTTTGTCCAACCCTTCTGGGACCT...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTAGGTCCCAGAAGGGTTaGACAAAACCACTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIRSQKG*TKPLGS
Trigger: ACTGCCGAGTGGTTTTGTCCAACCCTTCTGGGACCT...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTGCAAGCCTGGCTGTTTaGGTAGTCGTTAGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIASLAV*VVVRVA
Trigger: TGCTACCCTAACGACTACCCAAACAGCCAGGCTTGC...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAGCAAGCCTGGCTGTTTaGGTAGTCGTTAGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRASLAV*VVVRVA
Trigger: TGCTACCCTAACGACTACCCAAACAGCCAGGCTTGC...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGAAAGCACTGAGCTCTaGAATAGAGATGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLESTEL*NRDAFC
Trigger: GCAAAAAGCATCTCTATTCCAGAGCTCAGTGCTTTC...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAAGTGGTGACAGTGGGTaGTGTAGTACTAGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRSGDSG*CSTRRV
Trigger: AACTCTCCTAGTACTACACCACCCACTGTCACCACT...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000367609.8
CDS-3UTR CCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGACTTTGGGTTCCTCCATaGCAAGACAATGACCCAGTT +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRLWVPP*QDNDPV
Trigger: AACTGGGTCATTGTCTTGCCATGGAGGAACCCAAAG...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTGCCAGTAGTAGCCTTTaGGTTCCTCCATGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILASSSL*VPPWQD
Trigger: GTCTTGCCATGGAGGAACCCAAAGGCTACTACTGGC...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTCCCAGAAGGCACAGATaGGATGATGCACTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIPRRHR*DDALPE
Trigger: CTCAGGAAGTGCATCATCCCATCTGTGCCTTCTGGG...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTCCCAGAAGGCACAGATaGGATGATGCACTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILPRRHR*DDALPE
Trigger: CTCAGGAAGTGCATCATCCCATCTGTGCCTTCTGGG...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GGTCCTACATCCTGGAAAAGTCCAGTTTTGTTGAAGAAAGTAAACTGTGCTCTTCCCAGAAGGCACAGATaGGATGATGCACTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GPTSWKSPVLLKKVNCALPRRHR*DDALPE
Trigger: CTCAGGAAGTGCATCATCCCATCTGTGCCTTCTGGG...AAGAGCACAGTTTACTTTCTTCAACAAAACTGGACTTTTCCAGGATGTAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540208.1
CDS-3UTR CCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGACCAAAGTGTGTGAAGTaGTTACACAGGCAGACTGTC +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRPKCVK*LHRQTV
Trigger: GACAGTCTGCCTGTGTAACCACTTCACACACTTTGG...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGGTTCATCAAGATTTTaGAGGGATAATCCCTTCGCA +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLGSSRF*RDNPFA
Trigger: TGCGAAGGGATTATCCCTCCAAAATCTTGATGAACC...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTTCTTAAACAACTCCTaGGAGGTCCAGAATGATGGA +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTFLNNS*EVQNDG
Trigger: TCCATCATTCTGGACCTCCCAGGAGTTGTTTAAGAA...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTAGCGAAACATCATGTTaGCATTACTGCGCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTISETSC*HYCAEV
Trigger: GACCTCGGCGCAGTAATGTCAACATGATGTTTCGCT...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAGTGTGCAACACATCCTaGCGTGTTCCATCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRVCNTS*RVPSSK
Trigger: TTTGGAGGATGGAACACGTCAGGATGTGTTGCACAC...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GGTCCTACATCCTGGAAAAGTCCAGTTTTGTTGAAGAAAGTAAACTGTGCTCTTGTGTGCAACACATCCTaGCGTGTTCCATCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: GPTSWKSPVLLKKVNCALVCNTS*RVPSSK
Trigger: TTTGGAGGATGGAACACGTCAGGATGTGTTGCACAC...AAGAGCACAGTTTACTTTCTTCAACAAAACTGGACTTTTCCAGGATGTAGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540208.1
CDS-3UTR TCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCAGCCTTGTAATGAATTaGAGATGGAGAAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTSLVMN*RWRRGT
Trigger: TGTACCTCTTCTCCATCTTCAATTCATTACAAGGCT...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGCATGGGCCAGTTTTaGCAAGGACTTGTCCATGGA +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFSMGQF*QGLVHG
Trigger: TCCATGGACAAGTCCTTGTCAAAACTGGCCCATGCT...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTGGGATGATTGATGTTTaGTCTCCATCAGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFGMIDV*SPSAWA
Trigger: GGCCCATGCTGATGGAGATCAAACATCAATCATCCC...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTTGTATGCAGCAGCCTaGTCCATAAATAATACACCA +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTLYAAA*SINNTP
Trigger: TGGTGTATTATTTATGGATCAGGCTGCTGCATACAA...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTTTGTATGCAGCAGCCTaGTCCATAAATAATACACCA +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFLYAAA*SINNTP
Trigger: TGGTGTATTATTTATGGATCAGGCTGCTGCATACAA...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGTTACTCAGAATAGTCTaGGAGTTAGGTAAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLLLRIV*ELGKLH
Trigger: ATGCAGCTTACCTAACTCTCAGACTATTCTGAGTAA...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGATTGCCTCCCAGAACCTaGTACTTCCCAGATAACCCA +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRLPPRT*YFPDNP
Trigger: TGGGTTATCTGGGAAGTATCAGGTTCTGGGAGGCAA...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTTACAACCCTCCCCCGTaGAAGCCAAGCTGGGTAATG +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSYNPPP*KPSWVM
Trigger: CATTACCCAGCTTGGCTTTCACGGGGGAGGGTTGTA...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTCTTTGGGCAGAAATCTaGCTAGTTAGAAAGCTAACT +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFLWAEI*LVRKLT
Trigger: AGTTAGCTTTCTAACTAGTCAGATTTCTGCCCAAAG...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AGATTCCTGCCCTTCTTTGCAATCAATATAATGCCTAAGAACTACCGTGCTGCATTCCCCAGGAGTGAATaGTACAGGCATACACAGAGA +
Preference number: 4 (lower is better)
Translates to: RFLPFFAINIMPKNYRAAFPRSE*YRHTQR
Trigger: TCTCTGTGTATGCCTGTATCATTCACTCCTGGGGAA...TGCAGCACGGTAGTTCTTAGGCATTATATTGATTGCAAAGAAGGGCAGGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508295.2
CDS-3UTR GCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAAGGCAAAATTACAGATaGCAGTGGATCCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRRQNYR*QWIHLS
Trigger: GGACAAGTGGATCCACTGGCATCTGTAATTTTGCCT...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGATTCCTCCCACAGATCTaGACCATTACCACAATGAAC +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRFLPQI*TITTMN
Trigger: GTTCATTGTGGTAATGGTGCAGATCTGTGGGAGGAA...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTTATGCAAGGTTTGTATaGAGCAGCCTGATCCATAAA +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFYARFV*SSLIHK
Trigger: TTTATGGATCAGGCTGCTGCATACAAACCTTGCATA...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTTCCCATATCTCAGACTaGAAACTACCTGTTTTTCGT +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFSHISD*KLPVFR
Trigger: ACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGA...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGACATTATCTCATCATCTaGTGGAGCCAGGCAAATAGC +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRHYLII*WSQANS
Trigger: GCTATTTGCCTGGCTCCAGCAGATGATGAGATAATG...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTCCTTTACGCCGTTTCTaGAGAGTTCATGGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFPLRRF*RVHGLS
Trigger: GGAAAGCCCATGAACTCTCCAGAAACGGCGTAAAGG...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTAGAACAGGAGAGGACTaGGCTTCCATTTCCAATGGC +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILRTGED*ASISNG
Trigger: GCCATTGGAAATGGAAGCCCAGTCCTCTCCTGTTCT...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAAGAACAGGAGAGGACTaGGCTTCCATTTCCAATGGC +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRRTGED*ASISNG
Trigger: GCCATTGGAAATGGAAGCCCAGTCCTCTCCTGTTCT...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCCCACAAAATTTAGTCTaGCTCTCTCCATTATCAAGG +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTPQNLV*LSPLSR
Trigger: CCTTGATAATGGAGAGAGCCAGACTAAATTTTGTGG...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTCCACAAAATTTAGTCTaGCTCTCTCCATTATCAAGG +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFPQNLV*LSPLSR
Trigger: CCTTGATAATGGAGAGAGCCAGACTAAATTTTGTGG...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TTTGCAATCAATATAATGCCTAAGAACTACCGTGCTGCACGTATAACCCTGGGACTTTGGGTTCCTCCATaGCAAGACAATGACCCAGTT +
Preference number: 4 (lower is better)
Translates to: FAINIMPKNYRAARITLGLWVPP*QDNDPV
Trigger: AACTGGGTCATTGTCTTGCCATGGAGGAACCCAAAG...TCCCAGGGTTATACGTGCAGCACGGTAGTTCTTAGGCATTATATTGATTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508295.2
CDS-3UTR CCA 90 bp TTATGTTATCTTTATTCCCCAGGAGTGAATGATACAGGCATACACAGAGATTCCGCCAGTAGTAGCCTTTaGGTTCCTCCATGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: LCYLYSPGVNDTGIHRDSASSSL*VPPWQD
Trigger: GTCTTGCCATGGAGGAACCCAAAGGCTACTACTGGC...GGAATCTCTGTGTATGCCTGTATCATTCACTCCTGGGGAATAAAGATAACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508295.2
CDS-3UTR CCA 90 bp TGTTATCTTTATTCCCCAGGAGTGAATGATACAGGCATACACAGAGATTCCTGCAGAAGGTTGGATAGATaGCCAGTAGTAGCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: CYLYSPGVNDTGIHRDSCRRLDR*PVVAFG
Trigger: CCCAAAGGCTACTACTGGCCATCTATCCAACCTTCT...GCAGGAATCTCTGTGTATGCCTGTATCATTCACTCCTGGGGAATAAAGATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508295.2
CDS-3UTR CCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAAAAGCCAGGCTTGTCTaGACAAGGAAGAACGTATTC +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRKARLV*TRKNVF
Trigger: GAATACGTTCTTCCTTGTCCAGACAAGCCTGGCTTT...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCCCAGTAGGTTACCAATaGGTTGGTAGCATTGTAAAA +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTPVGYQ*VGSIVK
Trigger: TTTTACAATGCTACCAACCCATTGGTAACCTACTGG...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTCTTCTTTTAAACAGTTaGAGATATCAACAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFLLLNS*RYQQVP
Trigger: GGGGACCTGTTGATATCTCCAACTGTTTAAAAGAAG...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGACTAGGTTCCAGGTTCTaGACTTTGCCTTTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRLGSRF*TLPLSR
Trigger: TCTGCTTAAAGGCAAAGTCCAGAACCTGGAACCTAG...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTGCTCCACATTCGATCTaGGCGAAACATCATGTTGAC +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIAPHSI*AKHHVD
Trigger: GTCAACATGATGTTTCGCTCAGATCGAATGTGGAGC...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTGGCACATCCCCACACTaGGTGAGGAACACACATGAT +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSGTSPH*VRNTHD
Trigger: ATCATGTGTGTTCCTCACTCAGTGTGGGGATGTGCC...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTGAGACAATTTCATTTTaGTTGGAGCCCAACAACAAT +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFETISF*LEPNNN
Trigger: ATTGTTGTTGGGCTCCAATCAAAATGAAATTGTCTC...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAGAGTTTACAGTAGCTTaGCAGAGGGTCCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLEFTVA*QRVPRS
Trigger: AGACCTGGGGACCCTCTGTCAAGCTACTGTAAACTC...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000367609.8
CDS-3UTR TCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAGAGTTTACAGTAGCTTaGCAGAGGGTCCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIEFTVA*QRVPRS
Trigger: AGACCTGGGGACCCTCTGTCAAGCTACTGTAAACTC...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000367609.8
CDS-3UTR TCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGATCTCCAGCACTCAGGTaGAAACTGATATTAACGACA +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRSPALR*KLILTT
Trigger: TGTCGTTAATATCAGTTTTCACCTGAGTGCTGGAGA...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTTCCATGGCAAGACAATaGCCCAGTTGTCTCACATTC +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFSMARQ*PSCLTF
Trigger: GAATGTGAGACAACTGGGTCATTGTCTTGCCATGGA...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTTCCATGGCAAGACAATaGCCCAGTTGTCTCACATTC +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTISMARQ*PSCLTF
Trigger: GAATGTGAGACAACTGGGTCATTGTCTTGCCATGGA...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTATTCACAATTCTTTTaGCCTGTTCCACAATGTTGG +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTYSQFF*PVPQCW
Trigger: CCAACATTGTGGAACAGGTCAAAAGAATTGTGAATA...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAACAGGGATGATACGCTaGGAGCCAAGTTCCGAGTTG +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTTGMIR*EPSSEL
Trigger: CAACTCGGAACTTGGCTCTCAGCGTATCATCCCTGT...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAGTGATCCACTTTTGTTaGAGGAATGCTCATAGGAGA +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRVIHFC*RNAHRR
Trigger: TCTCCTATGAGCATTCCTTCAACAAAAGTGGATCAC...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000296932.13
CDS-3UTR TCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTACTCTCAGTACTaGAGTTTTAGTGATGACAAC +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTCYSQY*SFSDDN
Trigger: GTTGTCATCACTAAAACTTCAGTACTGAGAGTAACA...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGACCCTTGTCTCTAATTTaGATGTCTCCCCTGCATTAT +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRPLSLI*MSPLHY
Trigger: ATAATGCAGGGGAGACATTCAAATTAGAGACAAGGG...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCATACAACCCTCCCCCGTaGAAGCCAAGCTGGGTAATG +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSYNPPP*KPSWVM
Trigger: CATTACCCAGCTTGGCTTTCACGGGGGAGGGTTGTA...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTGCCAGAAGGAAGAAATaGAACAGGACTGCAACAGCA +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILARRKK*NRTATA
Trigger: TGCTGTTGCAGTCCTGTTGCATTTCTTCCTTCTGGC...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTGCCAGAAGGAAGAAATaGAACAGGACTGCAACAGCA +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIARRKK*NRTATA
Trigger: TGCTGTTGCAGTCCTGTTGCATTTCTTCCTTCTGGC...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTATACACCATCTATCTTaGCAGACCTCCTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFIHHLS*QTSSGS
Trigger: AGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTAT...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGACTCCCAGGATGGTGTTaGAGGATGTTGCAAAATGGA +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRLPGWC*RMLQNG
Trigger: TCCATTTTGCAACATCCTGCAACACCATCCTGGGAG...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAGAGGTGAGAACTGCATaGTTAGAACTGACAACAGAA +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQREVRTA*LELTTE
Trigger: TTCTGTTGTCAGTTCTAAGCATGCAGTTCTCACCTC...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAAAACCACTCGGCAGTTaGCACATCCCCACACTGAGT +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTKPLGS*HIPTLS
Trigger: ACTCAGTGTGGGGATGTGCCAACTGCCGAGTGGTTT...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAGTCGTTAGGGTAGCATaGAGAAGTAAAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRVVRVA*RSKGPR
Trigger: TCTGGGACCTTTACTTCTCCATGCTACCCTAACGAC...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAGCAAGCCTGGCTGTTTaGGTAGTCGTTAGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIASLAV*VVVRVA
Trigger: TGCTACCCTAACGACTACCCAAACAGCCAGGCTTGC...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAGCAAGCCTGGCTGTTTaGGTAGTCGTTAGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLASLAV*VVVRVA
Trigger: TGCTACCCTAACGACTACCCAAACAGCCAGGCTTGC...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTAGTGGTGACAGTGGGTaGTGTAGTACTAGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTISGDSG*CSTRRV
Trigger: AACTCTCCTAGTACTACACCACCCACTGTCACCACT...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000367609.8
CDS-3UTR CCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAGCCAGTAGTAGCCTTTaGGTTCCTCCATGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLASSSL*VPPWQD
Trigger: GTCTTGCCATGGAGGAACCCAAAGGCTACTACTGGC...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTAGAAGGTTGGATAGATaGCCAGTAGTAGCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIRRLDR*PVVAFG
Trigger: CCCAAAGGCTACTACTGGCCATCTATCCAACCTTCT...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGACTAAAGTTTTTCTTTaGGGTCCTACATCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLTKVFL*GPTSWK
Trigger: TTTCCAGGATGTAGGACCCCAAAGAAAAACTTTAGT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATACCCAGAAGGCACAGATaGGATGATGCACTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIPRRHR*DDALPE
Trigger: CTCAGGAAGTGCATCATCCCATCTGTGCCTTCTGGG...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGACCAAAGTGTGTGAAGTaGTTACACAGGCAGACTGTC +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRPKCVK*LHRQTV
Trigger: GACAGTCTGCCTGTGTAACCACTTCACACACTTTGG...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTCCAAAGTGTGTGAAGTaGTTACACAGGCAGACTGTC +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIPKCVK*LHRQTV
Trigger: GACAGTCTGCCTGTGTAACCACTTCACACACTTTGG...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGTTGAGTTGGAACCAATaGAGCTTGAAGACAAAGATT +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLLSWNQ*SLKTKI
Trigger: AATCTTTGTCTTCAAGCTCCATTGGTTCCAACTCAA...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTTGAGTTGGAACCAATaGAGCTTGAAGACAAAGATT +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTLSWNQ*SLKTKI
Trigger: AATCTTTGTCTTCAAGCTCCATTGGTTCCAACTCAA...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTTCTTGTCTCCCAGGATaGTGTTGCAGGATGTTGCAA +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILSCLPG*CCRMLQ
Trigger: TTGCAACATCCTGCAACACCATCCTGGGAGACAAGA...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTTCTTGTCTCCCAGGATaGTGTTGCAGGATGTTGCAA +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFSCLPG*CCRMLQ
Trigger: TTGCAACATCCTGCAACACCATCCTGGGAGACAAGA...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTAGCGAAACATCATGTTaGCATTACTGCGCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSSETSC*HYCAEV
Trigger: GACCTCGGCGCAGTAATGTCAACATGATGTTTCGCT...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAAGCGAAACATCATGTTaGCATTACTGCGCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTSETSC*HYCAEV
Trigger: GACCTCGGCGCAGTAATGTCAACATGATGTTTCGCT...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTCTTTCACATTACAGCTaGGGTTGGAGAGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFLSHYS*GWRGFW
Trigger: CCAAAATCCTCTCCAACCTCAGCTGTAATGTGAAAG...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TTATGTTATCTTTATTCCCCAGGAGTGAATGATACAGGCATACACAGAGATTCCTCCATGGCAAGACAATaGCCCAGTTGTCTCACATTC +
Preference number: 4 (lower is better)
Translates to: LCYLYSPGVNDTGIHRDSSMARQ*PSCLTF
Trigger: GAATGTGAGACAACTGGGTCATTGTCTTGCCATGGA...GGAATCTCTGTGTATGCCTGTATCATTCACTCCTGGGGAATAAAGATAACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508295.2
CDS-3UTR TCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAGTGTGCAACACATCCTaGCGTGTTCCATCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTVCNTS*RVPSSK
Trigger: TTTGGAGGATGGAACACGTCAGGATGTGTTGCACAC...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAGTGTGCAACACATCCTaGCGTGTTCCATCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLVCNTS*RVPSSK
Trigger: TTTGGAGGATGGAACACGTCAGGATGTGTTGCACAC...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTAGAGCAATGTACATGTaGATTGCTTCTAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIRAMYM*IASSPI
Trigger: GATGGGGCTAGAAGCAATTCACATGTACATTGCTCT...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTGGATGTAAGATAGGTTaGGTTGGAACCAATGGAGCT +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIGCKIG*VGTNGA
Trigger: AGCTCCATTGGTTCCAACTCAACCTATCTTACATCC...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTGAAGCACTGTCTGAGTaGTCCACTTTTGTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFEALSE*STFVEG
Trigger: TCCTTCAACAAAAGTGGATCACTCAGACAGTGCTTC...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000296932.13
CDS-3UTR TCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTAGCATGGGCCAGTTTTaGCAAGGACTTGTCCATGGA +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSSMGQF*QGLVHG
Trigger: TCCATGGACAAGTCCTTGTCAAAACTGGCCCATGCT...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAGGGATGATTGATGTTTaGTCTCCATCAGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLGMIDV*SPSAWA
Trigger: GGCCCATGCTGATGGAGATCAAACATCAATCATCCC...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAGGGATGATTGATGTTTaGTCTCCATCAGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTGMIDV*SPSAWA
Trigger: GGCCCATGCTGATGGAGATCAAACATCAATCATCCC...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTATGGACAGGGATGATTaGTGTTTGATCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIMDRDD*CLISIS
Trigger: GCTGATGGAGATCAAACATCAATCATCCCTGTCCAT...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTATGGACAGGGATGATTaGTGTTTGATCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFMDRDD*CLISIS
Trigger: GCTGATGGAGATCAAACATCAATCATCCCTGTCCAT...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTAGCTTCTGTGGCTACTaGGTCATGTTACTCTCAGTA +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTISFCGY*VMLLSV
Trigger: TACTGAGAGTAACATGACTCAGTAGCCACAGAAGCT...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATATTGCCTCCCAGAACCTaGTACTTCCCAGATAACCCA +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPILPPRT*YFPDNP
Trigger: TGGGTTATCTGGGAAGTATCAGGTTCTGGGAGGCAA...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTAGGCAAATAGCTTCCTaGTTGAAGCTCAGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILRQIAS*LKLSKR
Trigger: CCTTTTGCTGAGCTTCAATCAGGAAGCTATTTGCCT...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGACTTCATTGTTGTTTCTaGTCGCTAGAACAACTGACA +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRLHCCF*SLEQLT
Trigger: TGTCAGTTGTTCTAGCGAGCAGAAACAACAATGAAG...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTTTCCTCCCACAGATCTaGACCATTACCACAATGAAC +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFFLPQI*TITTMN
Trigger: GTTCATTGTGGTAATGGTGCAGATCTGTGGGAGGAA...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACATCCGGTTGCTTCTCTTaGCATTCCTCCCACAGATCT +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTSGCFS*HSSHRS
Trigger: AGATCTGTGGGAGGAATGGCAAGAGAAGCAACCGGA...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTTCCGGTTGCTTCTCTTaGCATTCCTCCCACAGATCT +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSSGCFS*HSSHRS
Trigger: AGATCTGTGGGAGGAATGGCAAGAGAAGCAACCGGA...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTATTTACATCACTAGTTaGAGTTTACACTGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFIYITS*SLHCLQ
Trigger: TTGCAAGCAGTGTAAACTGCAACTAGTGATGTAAAT...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTGGTCTTCCTCAGCATTaGTTCTCCCTTGTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIGLPQH*FSLVSN
Trigger: ATTAGAGACAAGGGAGAAGCAATGCTGAGGAAGACC...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTCATTATCTCATCATCTaGTGGAGCCAGGCAAATAGC +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFHYLII*WSQANS
Trigger: GCTATTTGCCTGGCTCCAGCAGATGATGAGATAATG...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGACATTATCTCATCATCTaGTGGAGCCAGGCAAATAGC +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRHYLII*WSQANS
Trigger: GCTATTTGCCTGGCTCCAGCAGATGATGAGATAATG...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAAAACCACTCGGCAGTTaGCACATCCCCACACTGAGT +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSKPLGS*HIPTLS
Trigger: ACTCAGTGTGGGGATGTGCCAACTGCCGAGTGGTTT...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCAGTCATAAATGCAATTaGGAGCTTCTTCAATGTCAA +
Preference number: 4 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTSHKCN*ELLQCQ
Trigger: TTGACATTGAAGAAGCTCCCAATTGCATTTATGACT...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTCTTCATGGCCAACTTTaGTTGCTTCAAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTILHGQL*LLQSRV
Trigger: CACTCTGCTTTGAAGCAACCAAAGTTGGCCATGAAG...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGACCAGTAGGTTACCAATaGGTTGGTAGCATTGTAAAA +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRPVGYQ*VGSIVK
Trigger: TTTTACAATGCTACCAACCCATTGGTAACCTACTGG...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCACCCAGAAGGCACAGATaGGATGATGCACTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSPRRHR*DDALPE
Trigger: CTCAGGAAGTGCATCATCCCATCTGTGCCTTCTGGG...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAACAAGGACTTGTCCATaGAAGCACTGTCTGAGTGAT +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRTRTCP*KHCLSD
Trigger: ATCACTCAGACAGTGCTTCCATGGACAAGTCCTTGT...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000296932.13
CDS-3UTR CCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTAGAAGATGCAGAAAATaGGTATATCCAGATATAACG +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFRRCRK*VYPDIT
Trigger: CGTTATATCTGGATATACCCATTTTCTGCATCTTCT...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGACTAGGTTCCAGGTTCTaGACTTTGCCTTTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRLGSRF*TLPLSR
Trigger: TCTGCTTAAAGGCAAAGTCCAGAACCTGGAACCTAG...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTTATCTCATCATCTGCTaGAGCCAGGCAAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILYLIIC*SQANSF
Trigger: GAAGCTATTTGCCTGGCTCCAGCAGATGATGAGATA...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTTATCTCATCATCTGCTaGAGCCAGGCAAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFYLIIC*SQANSF
Trigger: GAAGCTATTTGCCTGGCTCCAGCAGATGATGAGATA...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTCTATTGAAAAGGATTTaGCTCAGTGACCTTAGATTT +
Preference number: 4 (lower is better)
Translates to: LPVFRAERKASRFQVLDFLLKRI*LSDLRF
Trigger: AAATCTAAGGTCACTGAGCCAAATCCTTTTCAATAG...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGCTATTGAAAAGGATTTaGCTCAGTGACCTTAGATTT +
Preference number: 4 (lower is better)
Translates to: CKLPVFRAERKASRFQVLLLKRI*LSDLRF
Trigger: AAATCTAAGGTCACTGAGCCAAATCCTTTTCAATAG...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAGCTCCACATTCGATCTaGGCGAAACATCATGTTGAC +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLAPHSI*AKHHVD
Trigger: GTCAACATGATGTTTCGCTCAGATCGAATGTGGAGC...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTGATGCTAAAGTCACTTaGAAAGGACACATGCATCTC +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILDAKVT*KGHMHL
Trigger: GAGATGCATGTGTCCTTTTCAAGTGACTTTAGCATC...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTGGTAAAATGACCTTTTaGTTCCTTAAGGACACGGCA +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFGKMTF*FLKDTA
Trigger: TGCCGTGTCCTTAAGGAATCAAAAGGTCATTTTACC...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTGGTAAAATGACCTTTTaGTTCCTTAAGGACACGGCA +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILGKMTF*FLKDTA
Trigger: TGCCGTGTCCTTAAGGAATCAAAAGGTCATTTTACC...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATATTTGGAAGGTTGAATTaGGCCATTCTGCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIFGRLN*AILPPC
Trigger: GCAAGGTGGCAGAATGGCTCAATTCAACCTTCCAAA...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGATCTCCAGCACTCAGGTaGAAACTGATATTAACGACA +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRSPALR*KLILTT
Trigger: TGTCGTTAATATCAGTTTTCACCTGAGTGCTGGAGA...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTTCTCCAGCACTCAGGTaGAAACTGATATTAACGACA +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFSPALR*KLILTT
Trigger: TGTCGTTAATATCAGTTTTCACCTGAGTGCTGGAGA...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TTCTTTGCAATCAATATAATGCCTAAGAACTACCGTGCTGCACGTATAACCCTGTCTCCAGCACTCAGGTaGAAACTGATATTAACGACA +
Preference number: 4 (lower is better)
Translates to: FFAINIMPKNYRAARITLSPALR*KLILTT
Trigger: TGTCGTTAATATCAGTTTTCACCTGAGTGCTGGAGA...CAGGGTTATACGTGCAGCACGGTAGTTCTTAGGCATTATATTGATTGCAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508295.2
CDS-3UTR TCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAGAACTCCAAAGTGTGTaGAGTGGTTACACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTELQSV*SGYTGR
Trigger: TCTGCCTGTGTAACCACTTCACACACTTTGGAGTTC...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAGAACTCCAAAGTGTGTaGAGTGGTTACACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLELQSV*SGYTGR
Trigger: TCTGCCTGTGTAACCACTTCACACACTTTGGAGTTC...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAGAACTCCAAAGTGTGTaGAGTGGTTACACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIELQSV*SGYTGR
Trigger: TCTGCCTGTGTAACCACTTCACACACTTTGGAGTTC...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAGCACCATTACCACAATaGACATGGCAATGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRAPLPQ*TWQCSE
Trigger: TTCTGAACATTGCCATGTTCATTGTGGTAATGGTGC...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACATGCCGCCACTGTTTCTaGACATTCTCCTTCATAGCA +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTCRHCF*TFSFIA
Trigger: TGCTATGAAGGAGAATGTTCAGAAACAGTGGCGGCA...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTATGCCGCCACTGTTTCTaGACATTCTCCTTCATAGCA +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLCRHCF*TFSFIA
Trigger: TGCTATGAAGGAGAATGTTCAGAAACAGTGGCGGCA...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAAGCATGGGCCAGTTTTaGCAAGGACTTGTCCATGGA +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSSMGQF*QGLVHG
Trigger: TCCATGGACAAGTCCTTGTCAAAACTGGCCCATGCT...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTACCTTATCAATGACCTaGTGGACAGGGATGATTGAT +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFTLSMT*WTGMID
Trigger: ATCAATCATCCCTGTCCATCAGGTCATTGATAAGGT...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTTTAGGTGGAGTAAAATaGGCTCTATCTAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFLGGVK*ALSRVF
Trigger: GAAGACCCTAGATAGAGCTCATTTTACTCCACCTAA...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCATTGCCTCCCAGAACCTaGTACTTCCCAGATAACCCA +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSLPPRT*YFPDNP
Trigger: TGGGTTATCTGGGAAGTATCAGGTTCTGGGAGGCAA...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAAATAGAGATGCTTTTTaGAACAGATACCTGGTAAGC +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRNRDAF*NRYLVS
Trigger: GCTTACCAGGTATCTGTTGCAAAAAGCATCTCTATT...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTTTCCAGAAGTCATTTTaGCAGTCGACTACATTCCCT +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILFQKSF*QSTTFP
Trigger: AGGGAATGTAGTCGACTGGCAAAATGACTTCTGGAA...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CTGGACTTAAATTCTCAAGTAAGTTTGGAGGCAAAATTACAGATGCCAGTGGATAGGCAAAATTACAGATaGCAGTGGATCCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: LDLNSQVSLEAKLQMPVDRQNYR*QWIHLS
Trigger: GGACAAGTGGATCCACTGGCATCTGTAATTTTGCCT...ATCCACTGGCATCTGTAATTTTGCCTCCAAACTTACTTGAGAATTTAAGTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540208.1
CDS-3UTR GCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTGCCAGAAGGAAGAAATaGAACAGGACTGCAACAGCA +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSARRKK*NRTATA
Trigger: TGCTGTTGCAGTCCTGTTGCATTTCTTCCTTCTGGC...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCATCCGGTTGCTTCTCTTaGCATTCCTCCCACAGATCT +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSSGCFS*HSSHRS
Trigger: AGATCTGTGGGAGGAATGGCAAGAGAAGCAACCGGA...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAGTAAACAGTCTTTTCTaGCTGTGGTTGAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRVNSLF*LWLKCH
Trigger: ATGACATTTCAACCACAGGCAGAAAAGACTGTTTAC...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTCCACTGCATACAGCTTaGCTAATGGAAATTCTCCTT +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIPLHTA*LMEILL
Trigger: AAGGAGAATTTCCATTAGGCAAGCTGTATGCAGTGG...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAATACACCATCTATCTTaGCAGACCTCCTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLIHHLS*QTSSGS
Trigger: AGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTAT...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACACTCCCAGGATGGTGTTaGAGGATGTTGCAAAATGGA +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTLPGWC*RMLQNG
Trigger: TCCATTTTGCAACATCCTGCAACACCATCCTGGGAG...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTGAGGTGAGAACTGCATaGTTAGAACTGACAACAGAA +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFEVRTA*LELTTE
Trigger: TTCTGTTGTCAGTTCTAAGCATGCAGTTCTCACCTC...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTGAGGTGAGAACTGCATaGTTAGAACTGACAACAGAA +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILEVRTA*LELTTE
Trigger: TTCTGTTGTCAGTTCTAAGCATGCAGTTCTCACCTC...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTAATGGAGGTGAGAACTaGATGCTTAGAACTGACAAC +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTINGGEN*MLRTDN
Trigger: GTTGTCAGTTCTAAGCATGCAGTTCTCACCTCCATT...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTGTCGTTAGGGTAGCATaGAGAAGTAAAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSVVRVA*RSKGPR
Trigger: TCTGGGACCTTTACTTCTCCATGCTACCCTAACGAC...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAGTCGTTAGGGTAGCATaGAGAAGTAAAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTVVRVA*RSKGPR
Trigger: TCTGGGACCTTTACTTCTCCATGCTACCCTAACGAC...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTGAAAGCACTGAGCTCTaGAATAGAGATGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILESTEL*NRDAFC
Trigger: GCAAAAAGCATCTCTATTCCAGAGCTCAGTGCTTTC...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATACTTTGGGTTCCTCCATaGCAAGACAATGACCCAGTT +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPILWVPP*QDNDPV
Trigger: AACTGGGTCATTGTCTTGCCATGGAGGAACCCAAAG...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTCTTTGGGTTCCTCCATaGCAAGACAATGACCCAGTT +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSLWVPP*QDNDPV
Trigger: AACTGGGTCATTGTCTTGCCATGGAGGAACCCAAAG...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTAGAAGGTTGGATAGATaGCCAGTAGTAGCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSRRLDR*PVVAFG
Trigger: CCCAAAGGCTACTACTGGCCATCTATCCAACCTTCT...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAAGAAGGTTGGATAGATaGCCAGTAGTAGCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLRRLDR*PVVAFG
Trigger: CCCAAAGGCTACTACTGGCCATCTATCCAACCTTCT...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TTATGTTATCTTTATTCCCCAGGAGTGAATGATACAGGCATACACAGAGATTCCAAAGCCAGGCTTGTCTaGACAAGGAAGAACGTATTC +
Preference number: 4 (lower is better)
Translates to: LCYLYSPGVNDTGIHRDSKARLV*TRKNVF
Trigger: GAATACGTTCTTCCTTGTCCAGACAAGCCTGGCTTT...GGAATCTCTGTGTATGCCTGTATCATTCACTCCTGGGGAATAAAGATAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508295.2
CDS-3UTR CCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAAAAGTAACACTGGAATaGGATTTGTGGGCATTCAAA +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRKVTLE*DLWAFK
Trigger: TTTGAATGCCCACAAATCCCATTCCAGTGTTACTTT...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTTTCTTAAACAACTCCTaGGAGGTCCAGAATGATGGA +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFFLNNS*EVQNDG
Trigger: TCCATCATTCTGGACCTCCCAGGAGTTGTTTAAGAA...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTCATCCCCACACTGAGTaGGGAACACACATGATATAT +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSHPHTE*GTHMIY
Trigger: ATATATCATGTGTGTTCCTCACTCAGTGTGGGGATG...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATACTTTCACATTACAGCTaGGGTTGGAGAGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPILSHYS*GWRGFW
Trigger: CCAAAATCCTCTCCAACCTCAGCTGTAATGTGAAAG...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTACTTTCACATTACAGCTaGGGTTGGAGAGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLLSHYS*GWRGFW
Trigger: CCAAAATCCTCTCCAACCTCAGCTGTAATGTGAAAG...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCATTTGGAAGGTTGAATTaGGCCATTCTGCCACCTTGC +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSFGRLN*AILPPC
Trigger: GCAAGGTGGCAGAATGGCTCAATTCAACCTTCCAAA...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTATGTCTCACTTGCATCTaGATCTCTGTGTGCAACACA +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLCLTCI*ISVCNT
Trigger: TGTGTTGCACACAGAGATTCAGATGCAAGTGAGACA...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTAGAGCAATGTACATGTaGATTGCTTCTAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSRAMYM*IASSPI
Trigger: GATGGGGCTAGAAGCAATTCACATGTACATTGCTCT...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTAGCCTTGTAATGAATTaGAGATGGAGAAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTISLVMN*RWRRGT
Trigger: TGTACCTCTTCTCCATCTTCAATTCATTACAAGGCT...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCATGCCGCCACTGTTTCTaGACATTCTCCTTCATAGCA +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSCRHCF*TFSFIA
Trigger: TGCTATGAAGGAGAATGTTCAGAAACAGTGGCGGCA...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAGGATGTAAGATAGGTTaGGTTGGAACCAATGGAGCT +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLGCKIG*VGTNGA
Trigger: AGCTCCATTGGTTCCAACTCAACCTATCTTACATCC...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTGGATGTAAGATAGGTTaGGTTGGAACCAATGGAGCT +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSGCKIG*VGTNGA
Trigger: AGCTCCATTGGTTCCAACTCAACCTATCTTACATCC...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAATGGACAGGGATGATTaGTGTTTGATCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLMDRDD*CLISIS
Trigger: GCTGATGGAGATCAAACATCAATCATCCCTGTCCAT...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTCCTGATGGACAGGGATaGTTGATGTTTGATCTCCAT +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSPDGQG*LMFDLH
Trigger: ATGGAGATCAAACATCAATCATCCCTGTCCATCAGG...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTACCTGATGGACAGGGATaGTTGATGTTTGATCTCCAT +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLPDGQG*LMFDLH
Trigger: ATGGAGATCAAACATCAATCATCCCTGTCCATCAGG...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATACCTGATGGACAGGGATaGTTGATGTTTGATCTCCAT +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIPDGQG*LMFDLH
Trigger: ATGGAGATCAAACATCAATCATCCCTGTCCATCAGG...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTCTGGGAGGTCCAGAATaGTGGAACATCAACACTAAA +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSLGGPE*WNINTK
Trigger: TTTAGTGTTGATGTTCCATCATTCTGGACCTCCCAG...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACACTGGGAGGTCCAGAATaGTGGAACATCAACACTAAA +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTLGGPE*WNINTK
Trigger: TTTAGTGTTGATGTTCCATCATTCTGGACCTCCCAG...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTTTGTATGCAGCAGCCTaGTCCATAAATAATACACCA +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILLYAAA*SINNTP
Trigger: TGGTGTATTATTTATGGATCAGGCTGCTGCATACAA...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTTTACTCAGAATAGTCTaGGAGTTAGGTAAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILLLRIV*ELGKLH
Trigger: ATGCAGCTTACCTAACTCTCAGACTATTCTGAGTAA...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAAAGCACAGCATGCACTaGGACCGATTTCTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIKHSMH*DRFLRN
Trigger: GTTTCTTAGAAATCGGTCTCAGTGCATGCTGTGCTT...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAAGGCAAATAGCTTCCTaGTTGAAGCTCAGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLRQIAS*LKLSKR
Trigger: CCTTTTGCTGAGCTTCAATCAGGAAGCTATTTGCCT...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTCTTTGGGCAGAAATCTaGCTAGTTAGAAAGCTAACT +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTILWAEI*LVRKLT
Trigger: AGTTAGCTTTCTAACTAGTCAGATTTCTGCCCAAAG...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTCTTTGGGCAGAAATCTaGCTAGTTAGAAAGCTAACT +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFLWAEI*LVRKLT
Trigger: AGTTAGCTTTCTAACTAGTCAGATTTCTGCCCAAAG...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TTATGTTATCTTTATTCCCCAGGAGTGAATGATACAGGCATACACAGAGATTCCTTTATTCCCCAGGAGTaGATGATACAGGCATACACA +
Preference number: 4 (lower is better)
Translates to: LCYLYSPGVNDTGIHRDSFIPQE*MIQAYT
Trigger: TGTGTATGCCTGTATCATTCACTCCTGGGGAATAAA...GGAATCTCTGTGTATGCCTGTATCATTCACTCCTGGGGAATAAAGATAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508295.2
CDS-3UTR GCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAAGGCAAAATTACAGATaGCAGTGGATCCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLRQNYR*QWIHLS
Trigger: GGACAAGTGGATCCACTGGCATCTGTAATTTTGCCT...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTCTTCATTGTTGTTTCTaGTCGCTAGAACAACTGACA +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILLHCCF*SLEQLT
Trigger: TGTCAGTTGTTCTAGCGAGCAGAAACAACAATGAAG...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACATTCCTCCCACAGATCTaGACCATTACCACAATGAAC +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTFLPQI*TITTMN
Trigger: GTTCATTGTGGTAATGGTGCAGATCTGTGGGAGGAA...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAAGTTGCAGTTTACACTaGTTGCAAATCTTCACATTT +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRSCSLH*LQIFTF
Trigger: AAATGTGAAGATTTGCAAGCAGTGTAAACTGCAACT...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTTATGCAAGGTTTGTATaGAGCAGCCTGATCCATAAA +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFYARFV*SSLIHK
Trigger: TTTATGGATCAGGCTGCTGCATACAAACCTTGCATA...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTCATTATCTCATCATCTaGTGGAGCCAGGCAAATAGC +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSHYLII*WSQANS
Trigger: GCTATTTGCCTGGCTCCAGCAGATGATGAGATAATG...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp TGTTATCTTTATTCCCCAGGAGTGAATGATACAGGCATACACAGAGATTCCTGCATACACAGAGATTCCTaGCCTTCTTTGCAATCAATA +
Preference number: 4 (lower is better)
Translates to: CYLYSPGVNDTGIHRDSCIHRDS*PSLQSI
Trigger: TATTGATTGCAAAGAAGGGCAGGAATCTCTGTGTAT...GCAGGAATCTCTGTGTATGCCTGTATCATTCACTCCTGGGGAATAAAGATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508295.2
CDS-3UTR CCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAGTCGTTAGGGTAGCATaGAGAAGTAAAGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSVVRVA*RSKGPR
Trigger: TCTGGGACCTTTACTTCTCCATGCTACCCTAACGAC...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTCTTCATGGCCAACTTTaGTTGCTTCAAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSLHGQL*LLQSRV
Trigger: CACTCTGCTTTGAAGCAACCAAAGTTGGCCATGAAG...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGACAATTTCATTTTGATTaGAGCCCAACAACAATTTCC +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRQFHFD*SPTTIS
Trigger: GGAAATTGTTGTTGGGCTCCAATCAAAATGAAATTG...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAAAAGCCAGGCTTGTCTaGACAAGGAAGAACGTATTC +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIKARLV*TRKNVF
Trigger: GAATACGTTCTTCCTTGTCCAGACAAGCCTGGCTTT...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTCCAGTAGGTTACCAATaGGTTGGTAGCATTGTAAAA +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIPVGYQ*VGSIVK
Trigger: TTTTACAATGCTACCAACCCATTGGTAACCTACTGG...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTCTTCTTTTAAACAGTTaGAGATATCAACAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILLLLNS*RYQQVP
Trigger: GGGGACCTGTTGATATCTCCAACTGTTTAAAAGAAG...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGACTTCTTTTAAACAGTTaGAGATATCAACAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRLLLNS*RYQQVP
Trigger: GGGGACCTGTTGATATCTCCAACTGTTTAAAAGAAG...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCACCAAAGTGTGTGAAGTaGTTACACAGGCAGACTGTC +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSPKCVK*LHRQTV
Trigger: GACAGTCTGCCTGTGTAACCACTTCACACACTTTGG...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAACAAGGACTTGTCCATaGAAGCACTGTCTGAGTGAT +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLTRTCP*KHCLSD
Trigger: ATCACTCAGACAGTGCTTCCATGGACAAGTCCTTGT...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000296932.13
CDS-3UTR CCA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAGATATAACGATTAGGTaGAGTAAAATGAGCTCTATC +
Preference number: 4 (lower is better)
Translates to: PKSSPISQTANYLFFVQRDITIR*SKMSSI
Trigger: GATAGAGCTCATTTTACTCCACCTAATCGTTATATC...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACACTAGGTTCCAGGTTCTaGACTTTGCCTTTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTLGSRF*TLPLSR
Trigger: TCTGCTTAAAGGCAAAGTCCAGAACCTGGAACCTAG...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATACTAGGTTCCAGGTTCTaGACTTTGCCTTTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPILGSRF*TLPLSR
Trigger: TCTGCTTAAAGGCAAAGTCCAGAACCTGGAACCTAG...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCACATCCCCACACTGAGTaGGGAACACACATGATATAT +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSHPHTE*GTHMIY
Trigger: ATATATCATGTGTGTTCCTCACTCAGTGTGGGGATG...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTGATGCTAAAGTCACTTaGAAAGGACACATGCATCTC +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSDAKVT*KGHMHL
Trigger: GAGATGCATGTGTCCTTTTCAAGTGACTTTAGCATC...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAGATGCTAAAGTCACTTaGAAAGGACACATGCATCTC +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLDAKVT*KGHMHL
Trigger: GAGATGCATGTGTCCTTTTCAAGTGACTTTAGCATC...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAGATGCTAAAGTCACTTaGAAAGGACACATGCATCTC +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIDAKVT*KGHMHL
Trigger: GAGATGCATGTGTCCTTTTCAAGTGACTTTAGCATC...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAGGTAAAATGACCTTTTaGTTCCTTAAGGACACGGCA +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTGKMTF*FLKDTA
Trigger: TGCCGTGTCCTTAAGGAATCAAAAGGTCATTTTACC...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCATGTCTCACTTGCATCTaGATCTCTGTGTGCAACACA +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSCLTCI*ISVCNT
Trigger: TGTGTTGCACACAGAGATTCAGATGCAAGTGAGACA...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAGCAAACCCCAGCCAATaGTGCAGAATTTTAGAATGT +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIANPSQ*CRILEC
Trigger: ACATTCTAAAATTCTGCATCATTGGCTGGGGTTTGC...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGGTCACATAAAATATaGCTGGATCTTGAATCCAAC +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFRSHKI*LDLESN
Trigger: GTTGGATTCAAGATCCAGTCATATTTTATGTGACCT...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTAGGTCACATAAAATATaGCTGGATCTTGAATCCAAC +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIRSHKI*LDLESN
Trigger: GTTGGATTCAAGATCCAGTCATATTTTATGTGACCT...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAGCACCATTACCACAATaGACATGGCAATGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIAPLPQ*TWQCSE
Trigger: TTCTGAACATTGCCATGTTCATTGTGGTAATGGTGC...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTGCACCATTACCACAATaGACATGGCAATGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSAPLPQ*TWQCSE
Trigger: TTCTGAACATTGCCATGTTCATTGTGGTAATGGTGC...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAACCTTATCAATGACCTaGTGGACAGGGATGATTGAT +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLTLSMT*WTGMID
Trigger: ATCAATCATCCCTGTCCATCAGGTCATTGATAAGGT...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAACCTTATCAATGACCTaGTGGACAGGGATGATTGAT +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTTLSMT*WTGMID
Trigger: ATCAATCATCCCTGTCCATCAGGTCATTGATAAGGT...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTTGTTACTCTCAGTACTaGAGTTTTAGTGATGACAAC +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILCYSQY*SFSDDN
Trigger: GTTGTCATCACTAAAACTTCAGTACTGAGAGTAACA...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAAGCTTCTGTGGCTACTaGGTCATGTTACTCTCAGTA +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSSFCGY*VMLLSV
Trigger: TACTGAGAGTAACATGACTCAGTAGCCACAGAAGCT...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTACCCTTGTCTCTAATTTaGATGTCTCCCCTGCATTAT +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLPLSLI*MSPLHY
Trigger: ATAATGCAGGGGAGACATTCAAATTAGAGACAAGGG...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACATTAGGTGGAGTAAAATaGGCTCTATCTAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTLGGVK*ALSRVF
Trigger: GAAGACCCTAGATAGAGCTCATTTTACTCCACCTAA...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAAAGCACAGCATGCACTaGGACCGATTTCTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSKHSMH*DRFLRN
Trigger: GTTTCTTAGAAATCGGTCTCAGTGCATGCTGTGCTT...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTAATGCAAGTGAATGGTaGCAAGAATGGAAAATCTCT +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTINASEW*QEWKIS
Trigger: AGAGATTTTCCATTCTTGTCACCATTCACTTGCATT...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTAATGCAAGTGAATGGTaGCAAGAATGGAAAATCTCT +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILNASEW*QEWKIS
Trigger: AGAGATTTTCCATTCTTGTCACCATTCACTTGCATT...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAATAGAGATGCTTTTTaGAACAGATACCTGGTAAGC +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFNRDAF*NRYLVS
Trigger: GCTTACCAGGTATCTGTTGCAAAAAGCATCTCTATT...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAAATAGAGATGCTTTTTaGAACAGATACCTGGTAAGC +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRNRDAF*NRYLVS
Trigger: GCTTACCAGGTATCTGTTGCAAAAAGCATCTCTATT...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATATTCCAGAAGTCATTTTaGCAGTCGACTACATTCCCT +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIFQKSF*QSTTFP
Trigger: AGGGAATGTAGTCGACTGGCAAAATGACTTCTGGAA...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAAACCACAGCTTAGGTTaGTTTCAGCTTTCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLNHSLG*FQLSEL
Trigger: TAGCTCTGAAAGCTGAAAGCAACCTAAGCTGTGGTT...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAAACCACAGCTTAGGTTaGTTTCAGCTTTCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTNHSLG*FQLSEL
Trigger: TAGCTCTGAAAGCTGAAAGCAACCTAAGCTGTGGTT...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAGTAAACAGTCTTTTCTaGCTGTGGTTGAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRVNSLF*LWLKCH
Trigger: ATGACATTTCAACCACAGGCAGAAAAGACTGTTTAC...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACACCACTGCATACAGCTTaGCTAATGGAAATTCTCCTT +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTPLHTA*LMEILL
Trigger: AAGGAGAATTTCCATTAGGCAAGCTGTATGCAGTGG...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAGAGGTGAGAACTGCATaGTTAGAACTGACAACAGAA +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTEVRTA*LELTTE
Trigger: TTCTGTTGTCAGTTCTAAGCATGCAGTTCTCACCTC...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTAATGGAGGTGAGAACTaGATGCTTAGAACTGACAAC +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSNGGEN*MLRTDN
Trigger: GTTGTCAGTTCTAAGCATGCAGTTCTCACCTCCATT...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAAATGGAGGTGAGAACTaGATGCTTAGAACTGACAAC +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPINGGEN*MLRTDN
Trigger: GTTGTCAGTTCTAAGCATGCAGTTCTCACCTCCATT...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAGAAAGCACTGAGCTCTaGAATAGAGATGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTESTEL*NRDAFC
Trigger: GCAAAAAGCATCTCTATTCCAGAGCTCAGTGCTTTC...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTACTAAAGTTTTTCTTTaGGGTCCTACATCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILTKVFL*GPTSWK
Trigger: TTTCCAGGATGTAGGACCCCAAAGAAAAACTTTAGT...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTACTAAAGTTTTTCTTTaGGGTCCTACATCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFTKVFL*GPTSWK
Trigger: TTTCCAGGATGTAGGACCCCAAAGAAAAACTTTAGT...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TTGAACAGGATCCTTCAGATTCTGGATAGTAATGTTTCCAATACTGCACGCCATACTAAAGTTTTTCTTTaGGGTCCTACATCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LNRILQILDSNVSNTARHTKVFL*GPTSWK
Trigger: TTTCCAGGATGTAGGACCCCAAAGAAAAACTTTAGT...ATGGCGTGCAGTATTGGAAACATTACTATCCAGAATCTGAAGGATCCTGTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540208.1
CDS-3UTR CCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAGGTTCATCAAGATTTTaGAGGGATAATCCCTTCGCA +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTGSSRF*RDNPFA
Trigger: TGCGAAGGGATTATCCCTCCAAAATCTTGATGAACC...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTGGTTCATCAAGATTTTaGAGGGATAATCCCTTCGCA +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSGSSRF*RDNPFA
Trigger: TGCGAAGGGATTATCCCTCCAAAATCTTGATGAACC...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTTTGAGTTGGAACCAATaGAGCTTGAAGACAAAGATT +
Preference number: 4 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFLSWNQ*SLKTKI
Trigger: AATCTTTGTCTTCAAGCTCCATTGGTTCCAACTCAA...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAAAAGTAACACTGGAATaGGATTTGTGGGCATTCAAA +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRKVTLE*DLWAFK
Trigger: TTTGAATGCCCACAAATCCCATTCCAGTGTTACTTT...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTAAAGTAACACTGGAATaGGATTTGTGGGCATTCAAA +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIKVTLE*DLWAFK
Trigger: TTTGAATGCCCACAAATCCCATTCCAGTGTTACTTT...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACATTCTTAAACAACTCCTaGGAGGTCCAGAATGATGGA +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTFLNNS*EVQNDG
Trigger: TCCATCATTCTGGACCTCCCAGGAGTTGTTTAAGAA...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
3UTR CAA 72 bp TATTATGACTCACCCATATGTCTCACTTCATATTCCTaGGAACAAAACTCTCAATGGGGAAATACGAGGCTT +
Preference number: 4 (lower is better)
Translates to: YYDSPICLTSYS*EQNSQWGNTRL
Trigger: AAGCCTCGTATTTCCCCATTGAGAGTTTTGTTCCAAGGAATATGAAGTGAGACATATGGGTGAGTCATAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAGCAAACCCCAGCCAATaGTGCAGAATTTTAGAATGT +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSANPSQ*CRILEC
Trigger: ACATTCTAAAATTCTGCATCATTGGCTGGGGTTTGC...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAAGCCTTGTAATGAATTaGAGATGGAGAAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLSLVMN*RWRRGT
Trigger: TGTACCTCTTCTCCATCTTCAATTCATTACAAGGCT...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAGTGATCCACTTTTGTTaGAGGAATGCTCATAGGAGA +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSVIHFC*RNAHRR
Trigger: TCTCCTATGAGCATTCCTTCAACAAAAGTGGATCAC...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000296932.13
CDS-3UTR TCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAACCTTATCAATGACCTaGTGGACAGGGATGATTGAT +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSTLSMT*WTGMID
Trigger: ATCAATCATCCCTGTCCATCAGGTCATTGATAAGGT...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTATTACTCAGAATAGTCTaGGAGTTAGGTAAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLLLRIV*ELGKLH
Trigger: ATGCAGCTTACCTAACTCTCAGACTATTCTGAGTAA...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACACTTCATTGTTGTTTCTaGTCGCTAGAACAACTGACA +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTLHCCF*SLEQLT
Trigger: TGTCAGTTGTTCTAGCGAGCAGAAACAACAATGAAG...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTAGTTGCAGTTTACACTaGTTGCAAATCTTCACATTT +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTISCSLH*LQIFTF
Trigger: AAATGTGAAGATTTGCAAGCAGTGTAAACTGCAACT...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACATATGCAAGGTTTGTATaGAGCAGCCTGATCCATAAA +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTYARFV*SSLIHK
Trigger: TTTATGGATCAGGCTGCTGCATACAAACCTTGCATA...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAAGCTGCATAATAGTATaGAAGGTTTGTATGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLSCIIV*KVCMQQ
Trigger: CTGCTGCATACAAACCTTGCATACTATTATGCAGCT...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAAGCTGCATAATAGTATaGAAGGTTTGTATGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPISCIIV*KVCMQQ
Trigger: CTGCTGCATACAAACCTTGCATACTATTATGCAGCT...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATATCCCATATCTCAGACTaGAAACTACCTGTTTTTCGT +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPISHISD*KLPVFR
Trigger: ACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGA...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACATCCCATATCTCAGACTaGAAACTACCTGTTTTTCGT +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTSHISD*KLPVFR
Trigger: ACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGA...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTCAGCCTGTTAATATATaGCTATTGAAAAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIQPVNI*LLKRIW
Trigger: CCAAATCCTTTTCAATAGGCATATATTAACAGGCTG...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGACAGCCTGTTAATATATaGCTATTGAAAAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRQPVNI*LLKRIW
Trigger: CCAAATCCTTTTCAATAGGCATATATTAACAGGCTG...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAAGTCATAAATGCAATTaGGAGCTTCTTCAATGTCAA +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRSHKCN*ELLQCQ
Trigger: TTGACATTGAAGAAGCTCCCAATTGCATTTATGACT...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTAGTCATAAATGCAATTaGGAGCTTCTTCAATGTCAA +
Preference number: 4 (lower is better)
Translates to: ECLLFLSLNAVASQNLILSHKCN*ELLQCQ
Trigger: TTGACATTGAAGAAGCTCCCAATTGCATTTATGACT...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATACCACAAAATTTAGTCTaGCTCTCTCCATTATCAAGG +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIPQNLV*LSPLSR
Trigger: CCTTGATAATGGAGAGAGCCAGACTAAATTTTGTGG...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACACCAGTAGGTTACCAATaGGTTGGTAGCATTGTAAAA +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTPVGYQ*VGSIVK
Trigger: TTTTACAATGCTACCAACCCATTGGTAACCTACTGG...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTACTTCTTTTAAACAGTTaGAGATATCAACAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLLLLNS*RYQQVP
Trigger: GGGGACCTGTTGATATCTCCAACTGTTTAAAAGAAG...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAGGATCCTTCAGATTCTaGATAGTAATGTTTCCAATA +
Preference number: 4 (lower is better)
Translates to: NTPSILPDLLRLLYTITRGSFRF*IVMFPI
Trigger: TATTGGAAACATTACTATCCAGAATCTGAAGGATCC...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp GGTCCTACATCCTGGAAAAGTCCAGTTTTGTTGAAGAAAGTAAACTGTGCTCTTGGATCCTTCAGATTCTaGATAGTAATGTTTCCAATA +
Preference number: 4 (lower is better)
Translates to: GPTSWKSPVLLKKVNCALGSFRF*IVMFPI
Trigger: TATTGGAAACATTACTATCCAGAATCTGAAGGATCC...AAGAGCACAGTTTACTTTCTTCAACAAAACTGGACTTTTCCAGGATGTAGGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540208.1
CDS-3UTR TCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAGAGACAATTTCATTTTaGTTGGAGCCCAACAACAAT +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTETISF*LEPNNN
Trigger: ATTGTTGTTGGGCTCCAATCAAAATGAAATTGTCTC...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTGAGACAATTTCATTTTaGTTGGAGCCCAACAACAAT +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSETISF*LEPNNN
Trigger: ATTGTTGTTGGGCTCCAATCAAAATGAAATTGTCTC...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACATATTCACAATTCTTTTaGCCTGTTCCACAATGTTGG +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTYSQFF*PVPQCW
Trigger: CCAACATTGTGGAACAGGTCAAAAGAATTGTGAATA...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTAGGTCACATAAAATATaGCTGGATCTTGAATCCAAC +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSRSHKI*LDLESN
Trigger: GTTGGATTCAAGATCCAGTCATATTTTATGTGACCT...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTATGTTACTCTCAGTACTaGAGTTTTAGTGATGACAAC +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLCYSQY*SFSDDN
Trigger: GTTGTCATCACTAAAACTTCAGTACTGAGAGTAACA...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACATGTTACTCTCAGTACTaGAGTTTTAGTGATGACAAC +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTCYSQY*SFSDDN
Trigger: GTTGTCATCACTAAAACTTCAGTACTGAGAGTAACA...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATATTTTCTGCCTGTGGTTaGAATGTCATTGAAAATGAG +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIFSACG*NVIENE
Trigger: CTCATTTTCAATGACATTTCAACCACAGGCAGAAAA...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCATTGTATGCAGCAGCCTaGTCCATAAATAATACACCA +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSLYAAA*SINNTP
Trigger: TGGTGTATTATTTATGGATCAGGCTGCTGCATACAA...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTGTAAACAGTCTTTTCTaGCTGTGGTTGAAATGTCAT +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSVNSLF*LWLKCH
Trigger: ATGACATTTCAACCACAGGCAGAAAAGACTGTTTAC...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCATCCCATATCTCAGACTaGAAACTACCTGTTTTTCGT +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSSHISD*KLPVFR
Trigger: ACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGA...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAACTAAAGTTTTTCTTTaGGGTCCTACATCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTTKVFL*GPTSWK
Trigger: TTTCCAGGATGTAGGACCCCAAAGAAAAACTTTAGT...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACATTGAGTTGGAACCAATaGAGCTTGAAGACAAAGATT +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTLSWNQ*SLKTKI
Trigger: AATCTTTGTCTTCAAGCTCCATTGGTTCCAACTCAA...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTATCACTTCATATTCCTTaGAACAAAACTCTCAATGGG +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLSLHIP*NKTLNG
Trigger: CCCATTGAGAGTTTTGTTCCAAGGAATATGAAGTGA...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAGAGACAATTTCATTTTaGTTGGAGCCCAACAACAAT +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSETISF*LEPNNN
Trigger: ATTGTTGTTGGGCTCCAATCAAAATGAAATTGTCTC...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCATATTCACAATTCTTTTaGCCTGTTCCACAATGTTGG +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSYSQFF*PVPQCW
Trigger: CCAACATTGTGGAACAGGTCAAAAGAATTGTGAATA...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR TCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAAGGTCACATAAAATATaGCTGGATCTTGAATCCAAC +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSRSHKI*LDLESN
Trigger: GTTGGATTCAAGATCCAGTCATATTTTATGTGACCT...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTATTTACATCACTAGTTaGAGTTTACACTGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSIYITS*SLHCLQ
Trigger: TTGCAAGCAGTGTAAACTGCAACTAGTGATGTAAAT...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTCAGCCTGTTAATATATaGCTATTGAAAAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSQPVNI*LLKRIW
Trigger: CCAAATCCTTTTCAATAGGCATATATTAACAGGCTG...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATACAGCCTGTTAATATATaGCTATTGAAAAGGATTTGG +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIQPVNI*LLKRIW
Trigger: CCAAATCCTTTTCAATAGGCATATATTAACAGGCTG...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTACAATTTCATTTTGATTaGAGCCCAACAACAATTTCC +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLQFHFD*SPTTIS
Trigger: GGAAATTGTTGTTGGGCTCCAATCAAAATGAAATTG...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAGGATCCTTCAGATTCTaGATAGTAATGTTTCCAATA +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTGSFRF*IVMFPI
Trigger: TATTGGAAACATTACTATCCAGAATCTGAAGGATCC...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTGGATCCTTCAGATTCTaGATAGTAATGTTTCCAATA +
Preference number: 4 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSGSFRF*IVMFPI
Trigger: TATTGGAAACATTACTATCCAGAATCTGAAGGATCC...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAGATATAACGATTAGGTaGAGTAAAATGAGCTCTATC +
Preference number: 4 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLDITIR*SKMSSI
Trigger: GATAGAGCTCATTTTACTCCACCTAATCGTTATATC...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAAGAAGATGCAGAAAATaGGTATATCCAGATATAACG +
Preference number: 4 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIRRCRK*VYPDIT
Trigger: CGTTATATCTGGATATACCCATTTTCTGCATCTTCT...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCATCACTTCATATTCCTTaGAACAAAACTCTCAATGGG +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSSLHIP*NKTLNG
Trigger: CCCATTGAGAGTTTTGTTCCAAGGAATATGAAGTGA...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACACTATTGAAAAGGATTTaGCTCAGTGACCTTAGATTT +
Preference number: 4 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTLLKRI*LSDLRF
Trigger: AAATCTAAGGTCACTGAGCCAAATCCTTTTCAATAG...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR GCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAAGTTGCAGTTTACACTaGTTGCAAATCTTCACATTT +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSSCSLH*LQIFTF
Trigger: AAATGTGAAGATTTGCAAGCAGTGTAAACTGCAACT...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCACAATTTCATTTTGATTaGAGCCCAACAACAATTTCC +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSQFHFD*SPTTIS
Trigger: GGAAATTGTTGTTGGGCTCCAATCAAAATGAAATTG...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAGATATAACGATTAGGTaGAGTAAAATGAGCTCTATC +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSDITIR*SKMSSI
Trigger: GATAGAGCTCATTTTACTCCACCTAATCGTTATATC...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CCA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCACTATTGAAAAGGATTTaGCTCAGTGACCTTAGATTT +
Preference number: 4 (lower is better)
Translates to: RTITMWSPIHSLASKHYSLLKRI*LSDLRF
Trigger: AAATCTAAGGTCACTGAGCCAAATCCTTTTCAATAG...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS CCA 90 bp AGACCGGGCCAGGCAGGGGTGCGCGTCGCAGGTCCTCGCCCCCGCTaGCGGGAGGCGGGACTCGGCCACCACCCTAGGTACTTGGGTCCC +
Preference number: 5 (lower is better)
Translates to: RPGQAGVRVAGPRPR*REAGLGHHPRYLGP
Trigger: GGGACCCAAGTACCTAGGGTGGTGGCCGAGTCCCGCCTCCCGCCAGCGGGGGCGAGGACCTGCGACGCGCACCCCTGCCTGGCCCGGTCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000367608.6
CDS GCA 90 bp TTGGCCGCAAGATCATCCTCCACCACTTTCCCGCTCTGCTGCCGCTaGTCCACCCAGGGGGAACCCAGGCGCCCCAGCCCTGCGCCGCGG +
Preference number: 5 (lower is better)
Translates to: LAARSSSTTFPLCCR*STQGEPRRPSPAPR
Trigger: CCGCGGCGCAGGGCTGGGGCGCCTGGGTTCCCCCTGGGTGGAGCAGCGGCAGCAGAGCGGGAAAGTGGTGGAGGATGATCTTGCGGCCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
CDS CCA 90 bp CGCCCCAGCCCTGCGCCGCGGCGGGACCCTCCTTTACGCCGTTTCTaGAGAGTTCATGGGCTTTCCCGACGGCGCAAGGTGAACCCTGGG +
Preference number: 5 (lower is better)
Translates to: RPSPAPRRDPPLRRF*RVHGLSRRRKVNPG
Trigger: CCCAGGGTTCACCTTGCGCCGTCGGGAAAGCCCATGAACTCTCCAGAAACGGCGTAAAGGAGGGTCCCGCCGCGGCGCAGGGCTGGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
CDS-3UTR CAA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCCACCACCCTAGGTACTaGGGTCCCCCTCGCGGGCGC +
Preference number: 5 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTHHPRY*GPPRGR
Trigger: GCGCCCGCGAGGGGGACCCAAGTACCTAGGGTGGTG...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000367608.6
CDS CCA 90 bp TCTGAGCGAAACATCATGTTGACATTACTGCGCCGAGGTCCCCTTTaGCCGCAAGATCATCCTCCACCACTTTCCCGCTCTGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: SERNIMLTLLRRGPL*PQDHPPPLSRSAAA
Trigger: AGCGGCAGCAGAGCGGGAAAGTGGTGGAGGATGATCTTGCGGCCAAAGGGGACCTCGGCGCAGTAATGTCAACATGATGTTTCGCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
CDS CCA 90 bp ATAACCGGTGGGGGCTCGGAGCGTCCACATGCAAGCCTGGCTGTTTaGGTAGTCGTTAGGGTAGCATGGAGAAGTAAAGGTCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: ITGGGSERPHASLAV*VVVRVAWRSKGPRR
Trigger: CCTTCTGGGACCTTTACTTCTCCATGCTACCCTAACGACTACCCAAACAGCCAGGCTTGCATGTGGACGCTCCGAGCCCCCACCGGTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
ENST00000435011.6
ENST00000541199.5
ENST00000545477.1
CDS CCA 90 bp CGTCCACATGCAAGCCTGGCTGTTTGGGTAGTCGTTAGGGTAGCATaGAGAAGTAAAGGTCCCAGAAGGGTTGGACAAAACCACTCGGCA +
Preference number: 5 (lower is better)
Translates to: RPHASLAVWVVVRVA*RSKGPRRVGQNHSA
Trigger: TGCCGAGTGGTTTTGTCCAACCCTTCTGGGACCTTTACTTCTCCATGCTACCCTAACGACTACCCAAACAGCCAGGCTTGCATGTGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
ENST00000435011.6
ENST00000541199.5
ENST00000545477.1
CDS-3UTR CAA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTCACCACCCTAGGTACTaGGGTCCCCCTCGCGGGCGC +
Preference number: 5 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSHHPRY*GPPRGR
Trigger: GCGCCCGCGAGGGGGACCCAAGTACCTAGGGTGGTG...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000367608.6
CDS-3UTR CAA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTGCGCCGAGGTCCCCTTaGGCCGCAAGATCATCCTCC +
Preference number: 5 (lower is better)
Translates to: ECLLFLSLNAVASQNLILAPRSP*AARSSS
Trigger: GGAGGATGATCTTGCGGCCAAAGGGGACCTCGGCGC...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAGCGCCGAGGTCCCCTTaGGCCGCAAGATCATCCTCC +
Preference number: 5 (lower is better)
Translates to: NTPSILPDLLRLLYTITRAPRSP*AARSSS
Trigger: GGAGGATGATCTTGCGGCCAAAGGGGACCTCGGCGC...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTAAGGTCCCAGAAGGGTaGGACAAAACCACTCGGCAG +
Preference number: 5 (lower is better)
Translates to: LPVFRAERKASRFQVLDFKVPEG*DKTTRQ
Trigger: CTGCCGAGTGGTTTTGTCCAACCCTTCTGGGACCTT...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGAAGGTCCCAGAAGGGTaGGACAAAACCACTCGGCAG +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLKVPEG*DKTTRQ
Trigger: CTGCCGAGTGGTTTTGTCCAACCCTTCTGGGACCTT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGCCCAAAGCACCAACCTaGGCTCATCCTCAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLPKAPT*AHPQGF
Trigger: GAAGCCTTGAGGATGAGCCAAGGTTGGTGCTTTGGG...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGTCTCTCAGGGTCCGGTaGCTTCTCTTGCCATTCCTC +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLSLRVR*LLLPFL
Trigger: GAGGAATGGCAAGAGAAGCAACCGGACCCTGAGAGA...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGAGAGTTTACAGTAGCTaGACAGAGGGTCCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLRVYSS*TEGPQV
Trigger: GACCTGGGGACCCTCTGTCAAGCTACTGTAAACTCT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000367609.8
CDS CCA 90 bp AGGCTTGTCTGGACAAGGAAGAACGTATTCAGAAGGTTGGATAGATaGCCAGTAGTAGCCTTTGGGTTCCTCCATGGCAAGACAATGACC +
Preference number: 5 (lower is better)
Translates to: RLVWTRKNVFRRLDR*PVVAFGFLHGKTMT
Trigger: GGTCATTGTCTTGCCATGGAGGAACCCAAAGGCTACTACTGGCCATCTATCCAACCTTCTGAATACGTTCTTCCTTGTCCAGACAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000508295.2
CDS-3UTR CAA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCGAGCGAAACATCATGTaGACATTACTGCGCCGAGGT +
Preference number: 5 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTERNIM*TLLRRG
Trigger: ACCTCGGCGCAGTAATGTCAACATGATGTTTCGCTC...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGACCCAAAGCACCAACCTaGGCTCATCCTCAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: PKSSPISQTANYLFFVQRPKAPT*AHPQGF
Trigger: GAAGCCTTGAGGATGAGCCAAGGTTGGTGCTTTGGG...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGACTGTGAGGCACTTCTaGGAAGGTCCATCAGAACTC +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLTVRHF*EGPSEL
Trigger: GAGTTCTGATGGACCTTCCAAGAAGTGCCTCACAGT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTACTGTGAGGCACTTCTaGGAAGGTCCATCAGAACTC +
Preference number: 5 (lower is better)
Translates to: LPVFRAERKASRFQVLDFTVRHF*EGPSEL
Trigger: GAGTTCTGATGGACCTTCCAAGAAGTGCCTCACAGT...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGCAAAGTCCATCCACATaGAAGGAGGTGATCCAGCCA +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLQSPST*KEVIQP
Trigger: TGGCTGGATCACCTCCTTCAATGTGGATGGACTTTG...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAGTCCGGTTGCTTCTCTaGCCATTCCTCCCACAGATC +
Preference number: 5 (lower is better)
Translates to: PKSSPISQTANYLFFVQRVRLLL*PFLPQI
Trigger: GATCTGTGGGAGGAATGGCAAGAGAAGCAACCGGAC...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGAATACACCATCTATCTaGCCAGACCTCCTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLNTPSI*PDLLRL
Trigger: GAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGTCTCCCAGGATGGTGTaGCAGGATGTTGCAAAATGG +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLSPRMV*QDVAKW
Trigger: CCATTTTGCAACATCCTGCAACACCATCCTGGGAGA...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS CCA 90 bp GAGGCACTTCTTGGAAGGTCCATCAGAACTCCAAAGTGTGTGAAGTaGTTACACAGGCAGACTGTCTCACTTGCATCTGAATCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: EALLGRSIRTPKCVK*LHRQTVSLASESLC
Trigger: ACACAGAGATTCAGATGCAAGTGAGACAGTCTGCCTGTGTAACCACTTCACACACTTTGGAGTTCTGATGGACCTTCCAAGAAGTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS CCA 90 bp TATAAAGCAAATAAGAACAGGAGAGGACTGGGCTTCCATTTCCAATaGCAGCTCCACATTCGATCTGAGCGAAACATCCTTCCAAGCCCC +
Preference number: 5 (lower is better)
Translates to: YKANKNRRGLGFHFQ*QLHIRSERNILPSP
Trigger: GGGGCTTGGAAGGATGTTTCGCTCAGATCGAATGTGGAGCTGCCATTGGAAATGGAAGCCCAGTCCTCTCCTGTTCTTATTTGCTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000435011.6
ENST00000541199.5
ENST00000545477.1
CDS-3UTR CAA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAGCGCCGAGGTCCCCTTaGGCCGCAAGATCATCCTCC +
Preference number: 5 (lower is better)
Translates to: RTITMWSPIHSLASKHYSAPRSP*AARSSS
Trigger: GGAGGATGATCTTGCGGCCAAAGGGGACCTCGGCGC...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCAGCCATTCTGCCACCTaGCTCTGTACTTTTACCTCA +
Preference number: 5 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTSHSAT*LCTFTS
Trigger: TGAGGTAAAAGTACAGAGCAAGGTGGCAGAATGGCT...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTCTCTTGACTTTAATCTaGTCCTCTCCAGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: LPVFRAERKASRFQVLDFLLTLI*SSPALR
Trigger: CCTGAGTGCTGGAGAGGACAAGATTAAAGTCAAGAG...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGCTCTTGACTTTAATCTaGTCCTCTCCAGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLLLTLI*SSPALR
Trigger: CCTGAGTGCTGGAGAGGACAAGATTAAAGTCAAGAG...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGTTATCTTTATTCCCCAGGAGTGAATGATACAGGCATACACAGAGATTCCTGCCCCAAAGCACCAACCTaGGCTCATCCTCAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: CYLYSPGVNDTGIHRDSCPKAPT*AHPQGF
Trigger: GAAGCCTTGAGGATGAGCCAAGGTTGGTGCTTTGGG...GCAGGAATCTCTGTGTATGCCTGTATCATTCACTCCTGGGGAATAAAGATAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508295.2
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGTGCCAGTGGATCCACTaGTCCACTCTCAAAATCCAT +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLCQWIH*STLKIH
Trigger: ATGGATTTTGAGAGTGGACAAGTGGATCCACTGGCA...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTTGCCAGTGGATCCACTaGTCCACTCTCAAAATCCAT +
Preference number: 5 (lower is better)
Translates to: LPVFRAERKASRFQVLDFCQWIH*STLKIH
Trigger: ATGGATTTTGAGAGTGGACAAGTGGATCCACTGGCA...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTCAATGTACATGTGAATaGCTTCTAGCCCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: LPVFRAERKASRFQVLDFQCTCE*LLAPSR
Trigger: CCTGGATGGGGCTAGAAGCAATTCACATGTACATTG...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAGAGCGAAACATCATGTaGACATTACTGCGCCGAGGT +
Preference number: 5 (lower is better)
Translates to: PKSSPISQTANYLFFVQRERNIM*TLLRRG
Trigger: ACCTCGGCGCAGTAATGTCAACATGATGTTTCGCTC...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAAAAACCACTCGGCAGTaGGCACATCCCCACACTGAG +
Preference number: 5 (lower is better)
Translates to: NTPSILPDLLRLLYTITRKTTRQ*AHPHTE
Trigger: CTCAGTGTGGGGATGTGCCAACTGCCGAGTGGTTTT...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAAAGGTCCCAGAAGGGTaGGACAAAACCACTCGGCAG +
Preference number: 5 (lower is better)
Translates to: NTPSILPDLLRLLYTITRKVPEG*DKTTRQ
Trigger: CTGCCGAGTGGTTTTGTCCAACCCTTCTGGGACCTT...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAAGGTCCCAGAAGGGTaGGACAAAACCACTCGGCAG +
Preference number: 5 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFKVPEG*DKTTRQ
Trigger: CTGCCGAGTGGTTTTGTCCAACCCTTCTGGGACCTT...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGTCTTCATGGCCAACTTaGGTTGCTTCAAAGCAGAGT +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLSSWPT*VASKQS
Trigger: ACTCTGCTTTGAAGCAACCAAAGTTGGCCATGAAGA...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTATTCCAGAAGTCATTTaGCCAGTCGACTACATTCCC +
Preference number: 5 (lower is better)
Translates to: LPVFRAERKASRFQVLDFIPEVI*PVDYIP
Trigger: GGGAATGTAGTCGACTGGCAAAATGACTTCTGGAAT...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTCCCAAAGCACCAACCTaGGCTCATCCTCAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFPKAPT*AHPQGF
Trigger: GAAGCCTTGAGGATGAGCCAAGGTTGGTGCTTTGGG...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTCCCAAAGCACCAACCTaGGCTCATCCTCAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: ECLLFLSLNAVASQNLILPKAPT*AHPQGF
Trigger: GAAGCCTTGAGGATGAGCCAAGGTTGGTGCTTTGGG...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAGTCCGGTTGCTTCTCTaGCCATTCCTCCCACAGATC +
Preference number: 5 (lower is better)
Translates to: NTPSILPDLLRLLYTITRVRLLL*PFLPQI
Trigger: GATCTGTGGGAGGAATGGCAAGAGAAGCAACCGGAC...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTTCTCTCAGGGTCCGGTaGCTTCTCTTGCCATTCCTC +
Preference number: 5 (lower is better)
Translates to: ECLLFLSLNAVASQNLILSLRVR*LLLPFL
Trigger: GAGGAATGGCAAGAGAAGCAACCGGACCCTGAGAGA...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCAGTTTTGACAAGGACTaGTCCATGGAAGCACTGTCT +
Preference number: 5 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTSFDKD*SMEALS
Trigger: AGACAGTGCTTCCATGGACAAGTCCTTGTCAAAACT...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTAGTTTTGACAAGGACTaGTCCATGGAAGCACTGTCT +
Preference number: 5 (lower is better)
Translates to: LPVFRAERKASRFQVLDFSFDKD*SMEALS
Trigger: AGACAGTGCTTCCATGGACAAGTCCTTGTCAAAACT...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS GCA 90 bp GTAGGAGAAAGCTGTCCAATCACTGTCTTCATGGCCAACTTTGGTTaGTTCAAAGCAGAGTGTGAAAGCACTGAGCTCTGGAATAGAGAT +
Preference number: 5 (lower is better)
Translates to: VGESCPITVFMANFG*FKAECESTELWNRD
Trigger: ATCTCTATTCCAGAGCTCAGTGCTTTCACACTCTGCTTTGAAGCAACCAAAGTTGGCCATGAAGACAGTGATTGGACAGCTTTCTCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
ENST00000541199.5
CDS CCA 90 bp TTTATCGATTCTGTTAGTAACAGGCATGTTAGTGGTGACAGTGGGTaGTGTAGTACTAGGAGAGTTTACAGTAGCTTGACAGAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: FIDSVSNRHVSGDSG*CSTRRVYSSLTEGP
Trigger: GGGACCCTCTGTCAAGCTACTGTAAACTCTCCTAGTACTACACCACCCACTGTCACCACTAACATGCCTGTTACTAACAGAATCGATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGTCCTCAAGGCTTCTCTaGACTTTAATCTTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLSSRLL*TLILSS
Trigger: AGAGGACAAGATTAAAGTCAAGAGAAGCCTTGAGGA...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTAAGACAATGACCCAGTaGTCTCACATTCACTGTATG +
Preference number: 5 (lower is better)
Translates to: LPVFRAERKASRFQVLDFKTMTQ*SHIHCM
Trigger: CATACAGTGAATGTGAGACAACTGGGTCATTGTCTT...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCAACGTATTCAGAAGGTaGGATAGATGGCCAGTAGTA +
Preference number: 5 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTNVFRR*DRWPVV
Trigger: TACTACTGGCCATCTATCCAACCTTCTGAATACGTT...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGAACGTATTCAGAAGGTaGGATAGATGGCCAGTAGTA +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLNVFRR*DRWPVV
Trigger: TACTACTGGCCATCTATCCAACCTTCTGAATACGTT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGCTTCTTTTAAACAGTaGGAGATATCAACAGGTCCC +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLASFKQ*EISTGP
Trigger: GGGACCTGTTGATATCTCCAACTGTTTAAAAGAAGC...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGACCTGTTCCACAATGTaGGTAATATTGGCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLTCSTM*VILAEV
Trigger: AACCTCAGCCAATATTACCAACATTGTGGAACAGGT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTCCCTTGTCTCTAATTaGAATGTCTCCCCTGCATTA +
Preference number: 5 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTSLVSN*NVSPAL
Trigger: TAATGCAGGGGAGACATTCAAATTAGAGACAAGGGA...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGATCCAGGTTCTGGACTTaGCCTTTAAGCAGATTGGCT +
Preference number: 5 (lower is better)
Translates to: PKSSPISQTANYLFFVQRSRFWT*PLSRLA
Trigger: AGCCAATCTGCTTAAAGGCAAAGTCCAGAACCTGGA...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTGAGAGGTCCCTTGGGTaGCTGTGTAGCCTAAAAGCT +
Preference number: 5 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIERSLG*LCSLKA
Trigger: AGCTTTTAGGCTACACAGCAACCCAAGGGACCTCTC...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAGAGAGGTCCCTTGGGTaGCTGTGTAGCCTAAAAGCT +
Preference number: 5 (lower is better)
Translates to: NTPSILPDLLRLLYTITRERSLG*LCSLKA
Trigger: AGCTTTTAGGCTACACAGCAACCCAAGGGACCTCTC...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGCTGGGTAATGCTCTaGTCTCCCAGGATGGTGTTG +
Preference number: 5 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFSWVML*SPRMVL
Trigger: CAACACCATCCTGGGAGACAAGAGCATTACCCAGCT...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTAGCTGGGTAATGCTCTaGTCTCCCAGGATGGTGTTG +
Preference number: 5 (lower is better)
Translates to: ECLLFLSLNAVASQNLILSWVML*SPRMVL
Trigger: CAACACCATCCTGGGAGACAAGAGCATTACCCAGCT...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS GCA 90 bp CTTTCAGCTTTCAGAGCTAGGTTTGGGATATTCCAGAAGTCATTTTaGCAGTCGACTACATTCCCTTTCACATTACAGCTGAGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: LSAFRARFGIFQKSF*QSTTFPFTLQLRLE
Trigger: CTCCAACCTCAGCTGTAATGTGAAAGGGAATGTAGTCGACTGGCAAAATGACTTCTGGAATATCCCAAACCTAGCTCTGAAAGCTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
CDS GCA 90 bp AAATTAGCCAGTACCAGGACTTCCCTTTGTATCTACAGTAGTCACTaGAACTCCTGGATAAACCCCTACAGACAGAGCTGTAGATCTCAT +
Preference number: 5 (lower is better)
Translates to: KLASTRTSLCIYSSH*NSWINPYRQSCRSH
Trigger: ATGAGATCTACAGCTCTGTCTGTAGGGGTTTATCCAGGAGTTGCAGTGACTACTGTAGATACAAAGGGAAGTCCTGGTACTGGCTAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538281.1
CDS CCA 90 bp GGAGATTCAGGAACAGCAGGGCTGTGCTCAGGTTCATCAAGATTTTaGAGGGATAATCCCTTCGCAATTTCTCAAAAGCAACATATGTCA +
Preference number: 5 (lower is better)
Translates to: GDSGTAGLCSGSSRF*RDNPFAISQKQHMS
Trigger: TGACATATGTTGCTTTTGAGAAATTGCGAAGGGATTATCCCTCCAAAATCTTGATGAACCTGAGCACAGCCCTGCTGTTCCTGAATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS CCA 90 bp AGTACCAGGACTTCCCTTTGTATCTACAGTAGTCACTGCAACTCCTaGATAAACCCCTACAGACAGAGCTGTAGATCTCATTTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: STRTSLCIYSSHCNS*INPYRQSCRSHLGF
Trigger: AAAACCCAAATGAGATCTACAGCTCTGTCTGTAGGGGTTTATCCAGGAGTTGCAGTGACTACTGTAGATACAAAGGGAAGTCCTGGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538281.1
CDS-3UTR CAA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTGAGCGAAACATCATGTaGACATTACTGCGCCGAGGT +
Preference number: 5 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFERNIM*TLLRRG
Trigger: ACCTCGGCGCAGTAATGTCAACATGATGTTTCGCTC...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAAAAACCACTCGGCAGTaGGCACATCCCCACACTGAG +
Preference number: 5 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTKTTRQ*AHPHTE
Trigger: CTCAGTGTGGGGATGTGCCAACTGCCGAGTGGTTTT...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTTAAATGATAGGCCTTaGGCAGTTGCTCCACAAAAT +
Preference number: 5 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTLNDRP*AVAPQN
Trigger: ATTTTGTGGAGCAACTGCCAAAGGCCTATCATTTAA...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTTTAAATGATAGGCCTTaGGCAGTTGCTCCACAAAAT +
Preference number: 5 (lower is better)
Translates to: LPVFRAERKASRFQVLDFLNDRP*AVAPQN
Trigger: ATTTTGTGGAGCAACTGCCAAAGGCCTATCATTTAA...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTAGGTTGGAGAGGATTTaGGCATTCATGGTAAAATTC +
Preference number: 5 (lower is better)
Translates to: LPVFRAERKASRFQVLDFRLERI*AFMVKF
Trigger: GAATTTTACCATGAATGCCAAAATCCTCTCCAACCT...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGAGGTTGGAGAGGATTTaGGCATTCATGGTAAAATTC +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLRLERI*AFMVKF
Trigger: GAATTTTACCATGAATGCCAAAATCCTCTCCAACCT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AAGAACTACCGTGCTGCACGTATAACCCTGGGAAGGCTGATAACATGTAGCTTTTCCTCAAGGCTTCTCTaGACTTTAATCTTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: KNYRAARITLGRLITCSFSSRLL*TLILSS
Trigger: AGAGGACAAGATTAAAGTCAAGAGAAGCCTTGAGGA...AAAGCTACATGTTATCAGCCTTCCCAGGGTTATACGTGCAGCACGGTAGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508295.2
CDS-3UTR CAA 90 bp AAGAACTACCGTGCTGCACGTATAACCCTGGGAAGGCTGATAACATGTAGCTTTAACGTATTCAGAAGGTaGGATAGATGGCCAGTAGTA +
Preference number: 5 (lower is better)
Translates to: KNYRAARITLGRLITCSFNVFRR*DRWPVV
Trigger: TACTACTGGCCATCTATCCAACCTTCTGAATACGTT...AAAGCTACATGTTATCAGCCTTCCCAGGGTTATACGTGCAGCACGGTAGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508295.2
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGACAATGTTGGTAATATaGGCTGAGGTTAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLTMLVI*AEVKFC
Trigger: GCAGAACTTAACCTCAGCCAATATTACCAACATTGT...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCACAATGTTGGTAATATaGGCTGAGGTTAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTTMLVI*AEVKFC
Trigger: GCAGAACTTAACCTCAGCCAATATTACCAACATTGT...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTGGCAGACTGTCTCACTaGCATCTGAATCTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: ECLLFLSLNAVASQNLILGRLSH*HLNLCV
Trigger: CACACAGAGATTCAGATGCAAGTGAGACAGTCTGCC...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTGGCAGACTGTCTCACTaGCATCTGAATCTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIGRLSH*HLNLCV
Trigger: CACACAGAGATTCAGATGCAAGTGAGACAGTCTGCC...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAACTGTGAGGCACTTCTaGGAAGGTCCATCAGAACTC +
Preference number: 5 (lower is better)
Translates to: NTPSILPDLLRLLYTITRTVRHF*EGPSEL
Trigger: GAGTTCTGATGGACCTTCCAAGAAGTGCCTCACAGT...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAGTCCGGTTGCTTCTCTaGCCATTCCTCCCACAGATC +
Preference number: 5 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLVRLLL*PFLPQI
Trigger: GATCTGTGGGAGGAATGGCAAGAGAAGCAACCGGAC...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACATCTCTCAGGGTCCGGTaGCTTCTCTTGCCATTCCTC +
Preference number: 5 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTSLRVR*LLLPFL
Trigger: GAGGAATGGCAAGAGAAGCAACCGGACCCTGAGAGA...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTAAGCCTTGTAATGAATaGAAGATGGAGAAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: LPVFRAERKASRFQVLDFKPCNE*KMEKRY
Trigger: GTACCTCTTCTCCATCTTCAATTCATTACAAGGCTT...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGTGGAACCAATGGAGCTaGAAGACAAAGATTTTCCTA +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLWNQWS*KTKIFL
Trigger: TAGGAAAATCTTTGTCTTCAAGCTCCATTGGTTCCA...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCACACTGGAATGGGATTaGTGGGCATTCAAAATAGTT +
Preference number: 5 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTTLEWD*WAFKIV
Trigger: AACTATTTTGAATGCCCACAAATCCCATTCCAGTGT...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGATCCACTGCATACAGCTaGCCTAATGGAAATTCTCCT +
Preference number: 5 (lower is better)
Translates to: PKSSPISQTANYLFFVQRSTAYS*PNGNSP
Trigger: AGGAGAATTTCCATTAGGCAAGCTGTATGCAGTGGA...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAAACTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGTGGTGTTGCAGGATGTaGCAAAATGGAACAGTAATA +
Preference number: 5 (lower is better)
Translates to: CKLPVFRAERKASRFQVLWCCRM*QNGTVI
Trigger: TATTACTGTTCCATTTTGCAACATCCTGCAACACCA...CAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAGTTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTACCTGTTTTTCGTGCAGAGAGAAAGGCCTCTAGGTTCCAGGTTCTGGACTTTTGGTGTTGCAGGATGTaGCAAAATGGAACAGTAATA +
Preference number: 5 (lower is better)
Translates to: LPVFRAERKASRFQVLDFWCCRM*QNGTVI
Trigger: TATTACTGTTCCATTTTGCAACATCCTGCAACACCA...AAAGTCCAGAACCTGGAACCTAGAGGCCTTTCTCTCTGCACGAAAAACAGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTTCTCCCAGGATGGTGTaGCAGGATGTTGCAAAATGG +
Preference number: 5 (lower is better)
Translates to: ECLLFLSLNAVASQNLILSPRMV*QDVAKW
Trigger: CCATTTTGCAACATCCTGCAACACCATCCTGGGAGA...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTTCTCCCAGGATGGTGTaGCAGGATGTTGCAAAATGG +
Preference number: 5 (lower is better)
Translates to: ALRPISKKLHGLHHLRTISPRMV*QDVAKW
Trigger: CCATTTTGCAACATCCTGCAACACCATCCTGGGAGA...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS CCA 90 bp AGCATTGTAAAAACATATCCGAGAAGCAGAAAAGCCAGGCTTGTCTaGACAAGGAAGAACGTATTCAGAAGGTTGGATAGATGGCCAGTA +
Preference number: 5 (lower is better)
Translates to: SIVKTYPRSRKARLV*TRKNVFRRLDRWPV
Trigger: TACTGGCCATCTATCCAACCTTCTGAATACGTTCTTCCTTGTCCAGACAAGCCTGGCTTTTCTGCTTCTCGGATATGTTTTTACAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS CCA 90 bp CTTAGCCAACATTCAGACCTTGCCACTTCATGGACCAAGACCTCTTaGAAGCAGCAACTGCTAAGTGATCAGCAAGTTTTTATATGTCTA +
Preference number: 5 (lower is better)
Translates to: LSQHSDLATSWTKTS*KQQLLSDQQVFICL
Trigger: TAGACATATAAAAACTTGCTGATCACTTAGCAGTTGCTGCTTCCAAGAGGTCTTGGTCCATGAAGTGGCAAGGTCTGAATGTTGGCTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463637.1
CDS CCA 90 bp GTGAAAATATTACCATATCCGAGAAGCAGAAAAGCCAGGCTTGTCTaGACAAGGAAGAACGTATTCAGAAGGTTGGATAGATGGCCAGTA +
Preference number: 5 (lower is better)
Translates to: VKILPYPRSRKARLV*TRKNVFRRLDRWPV
Trigger: TACTGGCCATCTATCCAACCTTCTGAATACGTTCTTCCTTGTCCAGACAAGCCTGGCTTTTCTGCTTCTCGGATATGGTAATATTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508295.2
CDS-3UTR CAA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAAGAGTTTACAGTAGCTaGACAGAGGGTCCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLRVYSS*TEGPQV
Trigger: GACCTGGGGACCCTCTGTCAAGCTACTGTAAACTCT...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000367609.8
CDS-3UTR CAA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTCTCTTGACTTTAATCTaGTCCTCTCCAGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFLLTLI*SSPALR
Trigger: CCTGAGTGCTGGAGAGGACAAGATTAAAGTCAAGAG...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TTCTTTGCAATCAATATAATGCCTAAGAACTACCGTGCTGCACGTATAACCCTGCTCTTGACTTTAATCTaGTCCTCTCCAGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: FFAINIMPKNYRAARITLLLTLI*SSPALR
Trigger: CCTGAGTGCTGGAGAGGACAAGATTAAAGTCAAGAG...CAGGGTTATACGTGCAGCACGGTAGTTCTTAGGCATTATATTGATTGCAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508295.2
CDS-3UTR CAA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGATCCTCAAGGCTTCTCTaGACTTTAATCTTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: PKSSPISQTANYLFFVQRSSRLL*TLILSS
Trigger: AGAGGACAAGATTAAAGTCAAGAGAAGCCTTGAGGA...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTTGCCAGTGGATCCACTaGTCCACTCTCAAAATCCAT +
Preference number: 5 (lower is better)
Translates to: ECLLFLSLNAVASQNLILCQWIH*STLKIH
Trigger: ATGGATTTTGAGAGTGGACAAGTGGATCCACTGGCA...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTCAATGTACATGTGAATaGCTTCTAGCCCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFQCTCE*LLAPSR
Trigger: CCTGGATGGGGCTAGAAGCAATTCACATGTACATTG...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAGTCCGGTTGCTTCTCTaGCCATTCCTCCCACAGATC +
Preference number: 5 (lower is better)
Translates to: RTITMWSPIHSLASKHYSVRLLL*PFLPQI
Trigger: GATCTGTGGGAGGAATGGCAAGAGAAGCAACCGGAC...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTTGGGTTGCTGTGTAGCCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCCTTTTCTTGATGATATaGGTAGCTGTCTTACTCCAA +
Preference number: 5 (lower is better)
Translates to: LGLLCSLKALPYLRLQTTLFLMI*VAVLLQ
Trigger: TTGGAGTAAGACAGCTACCAATATCATCAAGAAAAG...GGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGGCTACACAGCAACCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGATCCCTTGTCTCTAATTaGAATGTCTCCCCTGCATTA +
Preference number: 5 (lower is better)
Translates to: PKSSPISQTANYLFFVQRSLVSN*NVSPAL
Trigger: TAATGCAGGGGAGACATTCAAATTAGAGACAAGGGA...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGATTAAGCAGATTGGCTTaGCCAGAATGTCTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: PKSSPISQTANYLFFVQRLSRLA*PECLLF
Trigger: GAAAAGGAGACATTCTGGCAAAGCCAATCTGCTTAA...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTTCCAGGTTCTGGACTTaGCCTTTAAGCAGATTGGCT +
Preference number: 5 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFSRFWT*PLSRLA
Trigger: AGCCAATCTGCTTAAAGGCAAAGTCCAGAACCTGGA...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAAGCTGGGTAATGCTCTaGTCTCCCAGGATGGTGTTG +
Preference number: 5 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTSWVML*SPRMVL
Trigger: CAACACCATCCTGGGAGACAAGAGCATTACCCAGCT...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS CCA 90 bp TATAAAGCAAATAAGAACAGGAGAGGACTGGGCTTCCATTTCCAATaGCAGCTCCACATTCGATCTGAGCGAAACATCATGTTGACATTA +
Preference number: 5 (lower is better)
Translates to: YKANKNRRGLGFHFQ*QLHIRSERNIMLTL
Trigger: TAATGTCAACATGATGTTTCGCTCAGATCGAATGTGGAGCTGCCATTGGAAATGGAAGCCCAGTCCTCTCCTGTTCTTATTTGCTTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
CDS-3UTR CAA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAGAGCGAAACATCATGTaGACATTACTGCGCCGAGGT +
Preference number: 5 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTERNIM*TLLRRG
Trigger: ACCTCGGCGCAGTAATGTCAACATGATGTTTCGCTC...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTTCTTCATGGCCAACTTaGGTTGCTTCAAAGCAGAGT +
Preference number: 5 (lower is better)
Translates to: ECLLFLSLNAVASQNLILSSWPT*VASKQS
Trigger: ACTCTGCTTTGAAGCAACCAAAGTTGGCCATGAAGA...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTATTCCAGAAGTCATTTaGCCAGTCGACTACATTCCC +
Preference number: 5 (lower is better)
Translates to: ECLLFLSLNAVASQNLILIPEVI*PVDYIP
Trigger: GGGAATGTAGTCGACTGGCAAAATGACTTCTGGAAT...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CAGAGATTCCTGCCCTTCTTTGCAATCAATATAATGCCTAAGAACTACCGTGCTAAGACAATGACCCAGTaGTCTCACATTCACTGTATG +
Preference number: 5 (lower is better)
Translates to: QRFLPFFAINIMPKNYRAKTMTQ*SHIHCM
Trigger: CATACAGTGAATGTGAGACAACTGGGTCATTGTCTT...AGCACGGTAGTTCTTAGGCATTATATTGATTGCAAAGAAGGGCAGGAATCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508295.2
CDS-3UTR CAA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAACAATGTTGGTAATATaGGCTGAGGTTAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: PKSSPISQTANYLFFVQRTMLVI*AEVKFC
Trigger: GCAGAACTTAACCTCAGCCAATATTACCAACATTGT...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CTGGACTTAAATTCTCAAGTAAGTTTGGAGGCAAAATTACAGATGCCAGTGGATTGCCAGTGGATCCACTaGTCCACTCTCAAAATCCAT +
Preference number: 5 (lower is better)
Translates to: LDLNSQVSLEAKLQMPVDCQWIH*STLKIH
Trigger: ATGGATTTTGAGAGTGGACAAGTGGATCCACTGGCA...ATCCACTGGCATCTGTAATTTTGCCTCCAAACTTACTTGAGAATTTAAGTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540208.1
CDS-3UTR CAA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTGGCAGACTGTCTCACTaGCATCTGAATCTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSGRLSH*HLNLCV
Trigger: CACACAGAGATTCAGATGCAAGTGAGACAGTCTGCC...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAACTGTGAGGCACTTCTaGGAAGGTCCATCAGAACTC +
Preference number: 5 (lower is better)
Translates to: KKLHGLHHLRTITMWSPITVRHF*EGPSEL
Trigger: GAGTTCTGATGGACCTTCCAAGAAGTGCCTCACAGT...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTCAAAGTCCATCCACATaGAAGGAGGTGATCCAGCCA +
Preference number: 5 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSQSPST*KEVIQP
Trigger: TGGCTGGATCACCTCCTTCAATGTGGATGGACTTTG...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTACAAAGTCCATCCACATaGAAGGAGGTGATCCAGCCA +
Preference number: 5 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLQSPST*KEVIQP
Trigger: TGGCTGGATCACCTCCTTCAATGTGGATGGACTTTG...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CCTAAAAGCTCTCCCATATCTCAGACTGCAAACTACCTGTTTTTCGTGCAGAGAACACTGGAATGGGATTaGTGGGCATTCAAAATAGTT +
Preference number: 5 (lower is better)
Translates to: PKSSPISQTANYLFFVQRTLEWD*WAFKIV
Trigger: AACTATTTTGAATGCCCACAAATCCCATTCCAGTGT...TCTCTGCACGAAAAACAGGTAGTTTGCAGTCTGAGATATGGGAGAGCTTTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTAATACACCATCTATCTaGCCAGACCTCCTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSNTPSI*PDLLRL
Trigger: GAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAAATACACCATCTATCTaGCCAGACCTCCTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTNTPSI*PDLLRL
Trigger: GAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACATCTCCCAGGATGGTGTaGCAGGATGTTGCAAAATGG +
Preference number: 5 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTSPRMV*QDVAKW
Trigger: CCATTTTGCAACATCCTGCAACACCATCCTGGGAGA...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAAGCTGGGTAATGCTCTaGTCTCCCAGGATGGTGTTG +
Preference number: 5 (lower is better)
Translates to: RTITMWSPIHSLASKHYSSWVML*SPRMVL
Trigger: CAACACCATCCTGGGAGACAAGAGCATTACCCAGCT...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTCTTTCAGAGCTAGGTTaGGGATATTCCAGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: ECLLFLSLNAVASQNLILLSELG*GYSRSH
Trigger: ATGACTTCTGGAATATCCCAAACCTAGCTCTGAAAG...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAGAACCACAGCTTAGGTaGCTTTCAGCTTTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLEPQLR*LSAFRA
Trigger: AGCTCTGAAAGCTGAAAGCAACCTAAGCTGTGGTTC...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAGAACCACAGCTTAGGTaGCTTTCAGCTTTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIEPQLR*LSAFRA
Trigger: AGCTCTGAAAGCTGAAAGCAACCTAAGCTGTGGTTC...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTGAACCACAGCTTAGGTaGCTTTCAGCTTTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSEPQLR*LSAFRA
Trigger: AGCTCTGAAAGCTGAAAGCAACCTAAGCTGTGGTTC...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAAGCCATTCTGCCACCTaGCTCTGTACTTTTACCTCA +
Preference number: 5 (lower is better)
Translates to: KKLHGLHHLRTITMWSPISHSAT*LCTFTS
Trigger: TGAGGTAAAAGTACAGAGCAAGGTGGCAGAATGGCT...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTAGCCATTCTGCCACCTaGCTCTGTACTTTTACCTCA +
Preference number: 5 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSSHSAT*LCTFTS
Trigger: TGAGGTAAAAGTACAGAGCAAGGTGGCAGAATGGCT...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTAAGACAATGACCCAGTaGTCTCACATTCACTGTATG +
Preference number: 5 (lower is better)
Translates to: ALRPISKKLHGLHHLRTIKTMTQ*SHIHCM
Trigger: CATACAGTGAATGTGAGACAACTGGGTCATTGTCTT...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAAAGACAATGACCCAGTaGTCTCACATTCACTGTATG +
Preference number: 5 (lower is better)
Translates to: NTPSILPDLLRLLYTITRKTMTQ*SHIHCM
Trigger: CATACAGTGAATGTGAGACAACTGGGTCATTGTCTT...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAAACGTATTCAGAAGGTaGGATAGATGGCCAGTAGTA +
Preference number: 5 (lower is better)
Translates to: NTPSILPDLLRLLYTITRNVFRR*DRWPVV
Trigger: TACTACTGGCCATCTATCCAACCTTCTGAATACGTT...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTGCTTCTTTTAAACAGTaGGAGATATCAACAGGTCCC +
Preference number: 5 (lower is better)
Translates to: ECLLFLSLNAVASQNLILASFKQ*EISTGP
Trigger: GGGACCTGTTGATATCTCCAACTGTTTAAAAGAAGC...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTACCTGTTCCACAATGTaGGTAATATTGGCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: ECLLFLSLNAVASQNLILTCSTM*VILAEV
Trigger: AACCTCAGCCAATATTACCAACATTGTGGAACAGGT...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAACCTGTTCCACAATGTaGGTAATATTGGCTGAGGTT +
Preference number: 5 (lower is better)
Translates to: NTPSILPDLLRLLYTITRTCSTM*VILAEV
Trigger: AACCTCAGCCAATATTACCAACATTGTGGAACAGGT...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATATGCCAGTGGATCCACTaGTCCACTCTCAAAATCCAT +
Preference number: 5 (lower is better)
Translates to: KKLHGLHHLRTITMWSPICQWIH*STLKIH
Trigger: ATGGATTTTGAGAGTGGACAAGTGGATCCACTGGCA...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACACAATGTACATGTGAATaGCTTCTAGCCCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTQCTCE*LLAPSR
Trigger: CCTGGATGGGGCTAGAAGCAATTCACATGTACATTG...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGATCCCTTGTCTCTAATTaGAATGTCTCCCCTGCATTA +
Preference number: 5 (lower is better)
Translates to: NTPSILPDLLRLLYTITRSLVSN*NVSPAL
Trigger: TAATGCAGGGGAGACATTCAAATTAGAGACAAGGGA...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTTTAAGCAGATTGGCTTaGCCAGAATGTCTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: ALRPISKKLHGLHHLRTILSRLA*PECLLF
Trigger: GAAAAGGAGACATTCTGGCAAAGCCAATCTGCTTAA...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTTCCAGGTTCTGGACTTaGCCTTTAAGCAGATTGGCT +
Preference number: 5 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSSRFWT*PLSRLA
Trigger: AGCCAATCTGCTTAAAGGCAAAGTCCAGAACCTGGA...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAATAGATAATTCCATCTaGACAGAGGGTCCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIIDNSI*TEGPQV
Trigger: GACCTGGGGACCCTCTGTCAAGATGGAATTATCTAT...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296932.13
ENST00000367608.6
CDS GCA 90 bp TTGAAACCTTTCTTCTGGATGCTAAAGTCACTTGAAAAGGACACATaGATCTCATTCGCACTTGAGTTAAATGATAGGCCTTTGGCAGTT +
Preference number: 5 (lower is better)
Translates to: LKPFFWMLKSLEKDT*ISFALELNDRPLAV
Trigger: AACTGCCAAAGGCCTATCATTTAACTCAAGTGCGAATGAGATGCATGTGTCCTTTTCAAGTGACTTTAGCATCCAGAAGAAAGGTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
ENST00000541199.5
ENST00000545477.1
CDS-3UTR CAA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATATCTTCATGGCCAACTTaGGTTGCTTCAAAGCAGAGT +
Preference number: 5 (lower is better)
Translates to: KKLHGLHHLRTITMWSPISSWPT*VASKQS
Trigger: ACTCTGCTTTGAAGCAACCAAAGTTGGCCATGAAGA...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTATTCCAGAAGTCATTTaGCCAGTCGACTACATTCCC +
Preference number: 5 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSIPEVI*PVDYIP
Trigger: GGGAATGTAGTCGACTGGCAAAATGACTTCTGGAAT...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAGAACCACAGCTTAGGTaGCTTTCAGCTTTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: RTITMWSPIHSLASKHYSEPQLR*LSAFRA
Trigger: AGCTCTGAAAGCTGAAAGCAACCTAAGCTGTGGTTC...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCACTCTTGACTTTAATCTaGTCCTCTCCAGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: RTITMWSPIHSLASKHYSLLTLI*SSPALR
Trigger: CCTGAGTGCTGGAGAGGACAAGATTAAAGTCAAGAG...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAACAATGTTGGTAATATaGGCTGAGGTTAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: NTPSILPDLLRLLYTITRTMLVI*AEVKFC
Trigger: GCAGAACTTAACCTCAGCCAATATTACCAACATTGT...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTAAGCCTTGTAATGAATaGAAGATGGAGAAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: ECLLFLSLNAVASQNLILKPCNE*KMEKRY
Trigger: GTACCTCTTCTCCATCTTCAATTCATTACAAGGCTT...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAAGTTTTGACAAGGACTaGTCCATGGAAGCACTGTCT +
Preference number: 5 (lower is better)
Translates to: KKLHGLHHLRTITMWSPISFDKD*SMEALS
Trigger: AGACAGTGCTTCCATGGACAAGTCCTTGTCAAAACT...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CCTCCTCAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTTGCAGTTTACACTGCTaGCAAATCTTCACATTTCTG +
Preference number: 5 (lower is better)
Translates to: PPQALIYYNQRTDTQVVFCSLHC*QIFTFL
Trigger: CAGAAATGTGAAGATTTGCAAGCAGTGTAAACTGCA...AAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTGAGGAGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GAATGTCTCCTTTTCTTATCACTTAATGCTGTTGCCTCCCAGAACCTGATACTTACACTGGAATGGGATTaGTGGGCATTCAAAATAGTT +
Preference number: 5 (lower is better)
Translates to: ECLLFLSLNAVASQNLILTLEWD*WAFKIV
Trigger: AACTATTTTGAATGCCCACAAATCCCATTCCAGTGT...AAGTATCAGGTTCTGGGAGGCAACAGCATTAAGTGATAAGAAAAGGAGACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACATCCACTGCATACAGCTaGCCTAATGGAAATTCTCCT +
Preference number: 5 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTSTAYS*PNGNSP
Trigger: AGGAGAATTTCCATTAGGCAAGCTGTATGCAGTGGA...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCAATAGATAATTCCATCTaGACAGAGGGTCCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: RTITMWSPIHSLASKHYSIDNSI*TEGPQV
Trigger: GACCTGGGGACCCTCTGTCAAGATGGAATTATCTAT...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296932.13
ENST00000367608.6
CDS TCA 90 bp CCTTCGCAATTTCTCAAAAGCAACATATGTCAGGAGAGTTGCTGCTaGAAAAATAGCAGATATTCCACACCCAATATAGCTGATGAAAGT +
Preference number: 5 (lower is better)
Translates to: PSQFLKSNICQESCC*KNSRYSTPNIADES
Trigger: ACTTTCATCAGCTATATTGGGTGTGGAATATCTGCTATTTTTTCAGCAGCAACTCTCCTGACATATGTTGCTTTTGAGAAATTGCGAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCATCTTCATGGCCAACTTaGGTTGCTTCAAAGCAGAGT +
Preference number: 5 (lower is better)
Translates to: RTITMWSPIHSLASKHYSSSWPT*VASKQS
Trigger: ACTCTGCTTTGAAGCAACCAAAGTTGGCCATGAAGA...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AATACACCATCTATCTTGCCAGACCTCCTCAGGCTCTTATATACTATAACCAGAAGAGACAATTTCATTTaGATTGGAGCCCAACAACAA +
Preference number: 5 (lower is better)
Translates to: NTPSILPDLLRLLYTITRRDNFI*IGAQQQ
Trigger: TTGTTGTTGGGCTCCAATCAAAATGAAATTGTCTCT...TCTGGTTATAGTATATAAGAGCCTGAGGAGGTCTGGCAAGATAGATGGTGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACACTTTCAGAGCTAGGTTaGGGATATTCCAGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTLSELG*GYSRSH
Trigger: ATGACTTCTGGAATATCCCAAACCTAGCTCTGAAAG...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAAAGACAATGACCCAGTaGTCTCACATTCACTGTATG +
Preference number: 5 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLKTMTQ*SHIHCM
Trigger: CATACAGTGAATGTGAGACAACTGGGTCATTGTCTT...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTAGCTTCTTTTAAACAGTaGGAGATATCAACAGGTCCC +
Preference number: 5 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLASFKQ*EISTGP
Trigger: GGGACCTGTTGATATCTCCAACTGTTTAAAAGAAGC...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTGCTTCTTTTAAACAGTaGGAGATATCAACAGGTCCC +
Preference number: 5 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSASFKQ*EISTGP
Trigger: GGGACCTGTTGATATCTCCAACTGTTTAAAAGAAGC...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp GCACTGAGACCGATTTCTAAGAAACTGCATGGACTCCATCATCTAAGAACAATTCTTTTCTTGATGATATaGGTAGCTGTCTTACTCCAA +
Preference number: 5 (lower is better)
Translates to: ALRPISKKLHGLHHLRTILFLMI*VAVLLQ
Trigger: TTGGAGTAAGACAGCTACCAATATCATCAAGAAAAG...AATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTTAGAAATCGGTCTCAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTTTAAGCAGATTGGCTTaGCCAGAATGTCTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSLSRLA*PECLLF
Trigger: GAAAAGGAGACATTCTGGCAAAGCCAATCTGCTTAA...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTTTAAATGATAGGCCTTaGGCAGTTGCTCCACAAAAT +
Preference number: 5 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSLNDRP*AVAPQN
Trigger: ATTTTGTGGAGCAACTGCCAAAGGCCTATCATTTAA...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTATTAAATGATAGGCCTTaGGCAGTTGCTCCACAAAAT +
Preference number: 5 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLLNDRP*AVAPQN
Trigger: ATTTTGTGGAGCAACTGCCAAAGGCCTATCATTTAA...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAAGGTTGGAGAGGATTTaGGCATTCATGGTAAAATTC +
Preference number: 5 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTRLERI*AFMVKF
Trigger: GAATTTTACCATGAATGCCAAAATCCTCTCCAACCT...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCACTTTCAGAGCTAGGTTaGGGATATTCCAGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: RTITMWSPIHSLASKHYSLSELG*GYSRSH
Trigger: ATGACTTCTGGAATATCCCAAACCTAGCTCTGAAAG...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCATCCTCAAGGCTTCTCTaGACTTTAATCTTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: RTITMWSPIHSLASKHYSSSRLL*TLILSS
Trigger: AGAGGACAAGATTAAAGTCAAGAGAAGCCTTGAGGA...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAAAGCCTTGTAATGAATaGAAGATGGAGAAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIKPCNE*KMEKRY
Trigger: GTACCTCTTCTCCATCTTCAATTCATTACAAGGCTT...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACAAAGCCTTGTAATGAATaGAAGATGGAGAAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTKPCNE*KMEKRY
Trigger: GTACCTCTTCTCCATCTTCAATTCATTACAAGGCTT...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATATGGAACCAATGGAGCTaGAAGACAAAGATTTTCCTA +
Preference number: 5 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIWNQWS*KTKIFL
Trigger: TAGGAAAATCTTTGTCTTCAAGCTCCATTGGTTCCA...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CAGGCTCTTATATACTATAACCAGAGGACTGACACACAAGTAGTTTTTAGACTATGGAACCAATGGAGCTaGAAGACAAAGATTTTCCTA +
Preference number: 5 (lower is better)
Translates to: QALIYYNQRTDTQVVFRLWNQWS*KTKIFL
Trigger: TAGGAAAATCTTTGTCTTCAAGCTCCATTGGTTCCA...TAGTCTAAAAACTACTTGTGTGTCAGTCCTCTGGTTATAGTATATAAGAGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTTGCAGTTTACACTGCTaGCAAATCTTCACATTTCTG +
Preference number: 5 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSCSLHC*QIFTFL
Trigger: CAGAAATGTGAAGATTTGCAAGCAGTGTAAACTGCA...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp CATTCACAGAAAGTAACACTGGAATGGGATTTGTGGGCATTCAAAATAGTTACACTCACTTCATATTCCTaGGAACAAAACTCTCAATGG +
Preference number: 5 (lower is better)
Translates to: HSQKVTLEWDLWAFKIVTLTSYS*EQNSQW
Trigger: CCATTGAGAGTTTTGTTCCAAGGAATATGAAGTGAG...TGTAACTATTTTGAATGCCCACAAATCCCATTCCAGTGTTACTTTCTGTGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTCTCACTTCATATTCCTaGGAACAAAACTCTCAATGG +
Preference number: 5 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSLTSYS*EQNSQW
Trigger: CCATTGAGAGTTTTGTTCCAAGGAATATGAAGTGAG...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATACTCACTTCATATTCCTaGGAACAAAACTCTCAATGG +
Preference number: 5 (lower is better)
Translates to: KKLHGLHHLRTITMWSPILTSYS*EQNSQW
Trigger: CCATTGAGAGTTTTGTTCCAAGGAATATGAAGTGAG...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCATTAAGCAGATTGGCTTaGCCAGAATGTCTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: RTITMWSPIHSLASKHYSLSRLA*PECLLF
Trigger: GAAAAGGAGACATTCTGGCAAAGCCAATCTGCTTAA...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATATGGTGTTGCAGGATGTaGCAAAATGGAACAGTAATA +
Preference number: 5 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIWCCRM*QNGTVI
Trigger: TATTACTGTTCCATTTTGCAACATCCTGCAACACCA...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp TGCAGAAAATGGGTATATCCAGATATAACGATTAGGTGGAGTAAAATGAGCTCTAGAGACAATTTCATTTaGATTGGAGCCCAACAACAA +
Preference number: 5 (lower is better)
Translates to: CRKWVYPDITIRWSKMSSRDNFI*IGAQQQ
Trigger: TTGTTGTTGGGCTCCAATCAAAATGAAATTGTCTCT...AGAGCTCATTTTACTCCACCTAATCGTTATATCTGGATATACCCATTTTCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATAAGAGACAATTTCATTTaGATTGGAGCCCAACAACAA +
Preference number: 5 (lower is better)
Translates to: KKLHGLHHLRTITMWSPIRDNFI*IGAQQQ
Trigger: TTGTTGTTGGGCTCCAATCAAAATGAAATTGTCTCT...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AAGAAACTGCATGGACTCCATCATCTAAGAACAATTACAATGTGGTCTCCTATACTTTTCTTGATGATATaGGTAGCTGTCTTACTCCAA +
Preference number: 5 (lower is better)
Translates to: KKLHGLHHLRTITMWSPILFLMI*VAVLLQ
Trigger: TTGGAGTAAGACAGCTACCAATATCATCAAGAAAAG...TATAGGAGACCACATTGTAATTGTTCTTAGATGATGGAGTCCATGCAGTTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS-3UTR CAA 90 bp AGAACAATTACAATGTGGTCTCCTATACATTCATTAGCAAGCAAGCATTACTCATGGTGTTGCAGGATGTaGCAAAATGGAACAGTAATA +
Preference number: 5 (lower is better)
Translates to: RTITMWSPIHSLASKHYSWCCRM*QNGTVI
Trigger: TATTACTGTTCCATTTTGCAACATCCTGCAACACCA...TGAGTAATGCTTGCTTGCTAATGAATGTATAGGAGACCACATTGTAATTGTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS CCA 72 bp GGCGGGAGGCGGGACTCGGCCACCACCCTAGGTACTTaGGTCCCCCTCGCGGGCGCAGGCGACTCTCCCCGG +
Preference number: 6 (lower is better)
Translates to: GGRRDSATTLGT*VPLAGAGDSPR
Trigger: CCGGGGAGAGTCGCCTGCGCCCGCGAGGGGGACCCAAGTACCTAGGGTGGTGGCCGAGTCCCGCCTCCCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000367608.6
CDS CCA 72 bp CAGGCAGGGGTGCGCGTCGCAGGTCCTCGCCCCCGCTaGCGGGAGGCGGGACTCGGCCACCACCCTAGGTAC +
Preference number: 6 (lower is better)
Translates to: QAGVRVAGPRPR*REAGLGHHPRY
Trigger: GTACCTAGGGTGGTGGCCGAGTCCCGCCTCCCGCCAGCGGGGGCGAGGACCTGCGACGCGCACCCCTGCCTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000367608.6
CDS CAA 72 bp TGGCGGGAGGCGGGACTCGGCCACCACCCTAGGTACTaGGGTCCCCCTCGCGGGCGCAGGCGACTCTCCCCG +
Preference number: 6 (lower is better)
Translates to: WREAGLGHHPRY*GPPRGRRRLSP
Trigger: CGGGGAGAGTCGCCTGCGCCCGCGAGGGGGACCCAAGTACCTAGGGTGGTGGCCGAGTCCCGCCTCCCGCCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000367608.6
CDS GCA 72 bp CTGCTCCACCCAGGGGGAACCCAGGCGCCCCAGCCCTaGGCCGCGGCGGGACCCTCCTTTACGCCGTTTCTG +
Preference number: 6 (lower is better)
Translates to: LLHPGGTQAPQP*AAAGPSFTPFL
Trigger: CAGAAACGGCGTAAAGGAGGGTCCCGCCGCGGCGCAGGGCTGGGGCGCCTGGGTTCCCCCTGGGTGGAGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
CDS CCA 72 bp GCGTTCAGCGCAGGGCCTGCGGACGAGGAAGCAGGCTaGCGGCAGGTCCCTCCTCGCAGGGAAGTTGGCAGG +
Preference number: 6 (lower is better)
Translates to: AFSAGPADEEAG*RQVPPRREVGR
Trigger: CCTGCCAACTTCCCTGCGAGGAGGGACCTGCCGCCAGCCTGCTTCCTCGTCCGCAGGCCCTGCGCTGAACGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
CDS GCA 72 bp GCCGCAAGATCATCCTCCACCACTTTCCCGCTCTGCTaGCGCTGCTCCACCCAGGGGGAACCCAGGCGCCCC +
Preference number: 6 (lower is better)
Translates to: AARSSSTTFPLC*RCSTQGEPRRP
Trigger: GGGGCGCCTGGGTTCCCCCTGGGTGGAGCAGCGGCAGCAGAGCGGGAAAGTGGTGGAGGATGATCTTGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
CDS CCA 72 bp AGTTCATGGGCTTTCCCGACGGCGCAAGGTGAACCCTaGGCGCGGCAGCGTTCAGCGCAGGGCCTGCGGACG +
Preference number: 6 (lower is better)
Translates to: SSWAFPTAQGEP*ARQRSAQGLRT
Trigger: CGTCCGCAGGCCCTGCGCTGAACGCTGCCGCGCCCAGGGTTCACCTTGCGCCGTCGGGAAAGCCCATGAACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
CDS GCA 72 bp AGATCATCCTCCACCACTTTCCCGCTCTGCTGCCGCTaGTCCACCCAGGGGGAACCCAGGCGCCCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: RSSSTTFPLCCR*STQGEPRRPSP
Trigger: AGGGCTGGGGCGCCTGGGTTCCCCCTGGGTGGAGCAGCGGCAGCAGAGCGGGAAAGTGGTGGAGGATGATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
CDS TCA 72 bp TCTGGAGAGTTCATGGGCTTTCCCGACGGCGCAAGGTaGACCCTGGGCGCGGCAGCGTTCAGCGCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: SGEFMGFPDGAR*TLGAAAFSAGP
Trigger: AGGCCCTGCGCTGAACGCTGCCGCGCCCAGGGTTCACCTTGCGCCGTCGGGAAAGCCCATGAACTCTCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
CDS GCA 72 bp TTGGCCGCAAGATCATCCTCCACCACTTTCCCGCTCTaGTGCCGCTGCTCCACCCAGGGGGAACCCAGGCGC +
Preference number: 6 (lower is better)
Translates to: LAARSSSTTFPL*CRCSTQGEPRR
Trigger: GCGCCTGGGTTCCCCCTGGGTGGAGCAGCGGCAGCAGAGCGGGAAAGTGGTGGAGGATGATCTTGCGGCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
CDS CCA 72 bp CCTGCGCCGCGGCGGGACCCTCCTTTACGCCGTTTCTaGAGAGTTCATGGGCTTTCCCGACGGCGCAAGGTG +
Preference number: 6 (lower is better)
Translates to: PAPRRDPPLRRF*RVHGLSRRRKV
Trigger: CACCTTGCGCCGTCGGGAAAGCCCATGAACTCTCCAGAAACGGCGTAAAGGAGGGTCCCGCCGCGGCGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
CDS TCA 72 bp GATCTGAGCGAAACATCCTTCCAAGCCCCCAGGTGTTaGTTCCGGAGAGCGCCTTCTTGGCAGGGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: DLSETSFQAPRC*FRRAPSWQGQA
Trigger: GGCCTGGCCCTGCCAAGAAGGCGCTCTCCGGAATCAACACCTGGGGGCTTGGAAGGATGTTTCGCTCAGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435011.6
ENST00000541199.5
ENST00000545477.1
CDS CAA 72 bp CGATCTGAGCGAAACATCCTTCCAAGCCCCCAGGTGTaGATTCCGGAGAGCGCCTTCTTGGCAGGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: RSERNILPSPQV*IPESAFLAGPG
Trigger: GCCTGGCCCTGCCAAGAAGGCGCTCTCCGGAATCAACACCTGGGGGCTTGGAAGGATGTTTCGCTCAGATCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000435011.6
ENST00000541199.5
ENST00000545477.1
CDS GCA 72 bp AGAGTTTACAGTAGCTTGACAGAGGGTCCCCAGGTCTaGACAGCTGGCCAGTTCTGCTGCTGGGAGCGGGAT +
Preference number: 6 (lower is better)
Translates to: RVYSSLTEGPQV*TAGQFCCWERD
Trigger: ATCCCGCTCCCAGCAGCAGAACTGGCCAGCTGTGCAGACCTGGGGACCCTCTGTCAAGCTACTGTAAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000367609.8
CDS CCA 72 bp GGGGGCTCGGAGCGTCCACATGCAAGCCTGGCTGTTTaGGTAGTCGTTAGGGTAGCATGGAGAAGTAAAGGT +
Preference number: 6 (lower is better)
Translates to: GGSERPHASLAV*VVVRVAWRSKG
Trigger: ACCTTTACTTCTCCATGCTACCCTAACGACTACCCAAACAGCCAGGCTTGCATGTGGACGCTCCGAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
ENST00000435011.6
ENST00000541199.5
ENST00000545477.1
CDS GCA 72 bp ATAGATAATTCCATCTTGACAGAGGGTCCCCAGGTCTaGACAGCTGGCCAGTTCTGCTGCTGGGAGCGGGAT +
Preference number: 6 (lower is better)
Translates to: IDNSILTEGPQV*TAGQFCCWERD
Trigger: ATCCCGCTCCCAGCAGCAGAACTGGCCAGCTGTGCAGACCTGGGGACCCTCTGTCAAGATGGAATTATCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296932.13
ENST00000367608.6
CDS CAA 72 bp AAACATCATGTTGACATTACTGCGCCGAGGTCCCCTTaGGCCGCAAGATCATCCTCCACCACTTTCCCGCTC +
Preference number: 6 (lower is better)
Translates to: KHHVDITAPRSP*AARSSSTTFPL
Trigger: GAGCGGGAAAGTGGTGGAGGATGATCTTGCGGCCAAAGGGGACCTCGGCGCAGTAATGTCAACATGATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
CDS GCA 72 bp GCAGGTTCCTTAACACTTCTTCTCTCAGGGTCCGGTTaGTTCTCTTGCCATTCCTCCCACAGATCTGCACCA +
Preference number: 6 (lower is better)
Translates to: AGSLTLLLSGSG*FSCHSSHRSAP
Trigger: TGGTGCAGATCTGTGGGAGGAATGGCAAGAGAAGCAACCGGACCCTGAGAGAAGAAGTGTTAAGGAACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000472054.2
CDS CCA 72 bp GCAAGCCTGGCTGTTTGGGTAGTCGTTAGGGTAGCATaGAGAAGTAAAGGTCCCAGAAGGGTTGGACAAAAC +
Preference number: 6 (lower is better)
Translates to: ASLAVWVVVRVA*RSKGPRRVGQN
Trigger: GTTTTGTCCAACCCTTCTGGGACCTTTACTTCTCCATGCTACCCTAACGACTACCCAAACAGCCAGGCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
ENST00000435011.6
ENST00000541199.5
ENST00000545477.1
CDS CAA 90 bp AGAAAAGCCAGGCTTGTCTGGACAAGGAAGAACGTATTCAGAAGGTaGGATAGATGGCCAGTAGTAGCCTTTGGGTTCCTCCATGGCAAG +
Preference number: 6 (lower is better)
Translates to: RKARLVWTRKNVFRR*DRWPVVAFGFLHGK
Trigger: CTTGCCATGGAGGAACCCAAAGGCTACTACTGGCCATCTATCCAACCTTCTGAATACGTTCTTCCTTGTCCAGACAAGCCTGGCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000508295.2
CDS GCA 72 bp GTCCGGTTGCTTCTCTTGCCATTCCTCCCACAGATCTaGACCATTACCACAATGAACATGGCAATGTTCAGA +
Preference number: 6 (lower is better)
Translates to: VRLLLLPFLPQI*TITTMNMAMFR
Trigger: TCTGAACATTGCCATGTTCATTGTGGTAATGGTGCAGATCTGTGGGAGGAATGGCAAGAGAAGCAACCGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000472054.2
CDS CCA 72 bp TGGACAAGGAAGAACGTATTCAGAAGGTTGGATAGATaGCCAGTAGTAGCCTTTGGGTTCCTCCATGGCAAG +
Preference number: 6 (lower is better)
Translates to: WTRKNVFRRLDR*PVVAFGFLHGK
Trigger: CTTGCCATGGAGGAACCCAAAGGCTACTACTGGCCATCTATCCAACCTTCTGAATACGTTCTTCCTTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000508295.2
CDS TCA 72 bp ACCCCTGTCACCCAGATTATGAAAGCATACCCACTCTaGGCTCCCACAATACTTTATGGCTACTGCTCTAGT +
Preference number: 6 (lower is better)
Translates to: TPVTQIMKAYPL*APTILYGYCSS
Trigger: ACTAGAGCAGTAGCCATAAAGTATTGTGGGAGCTCAGAGTGGGTATGCTTTCATAATCTGGGTGACAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463637.1
CDS GCA 72 bp AGTACCAGGACTTCCCTTTGTATCTACAGTAGTCACTaGAACTCCTGGATAAACCCCTACAGACAGAGCTGT +
Preference number: 6 (lower is better)
Translates to: STRTSLCIYSSH*NSWINPYRQSC
Trigger: ACAGCTCTGTCTGTAGGGGTTTATCCAGGAGTTGCAGTGACTACTGTAGATACAAAGGGAAGTCCTGGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538281.1
CDS CAA 72 bp GAGAAAGCTGTCCAATCACTGTCTTCATGGCCAACTTaGGTTGCTTCAAAGCAGAGTGTGAAAGCACTGAGC +
Preference number: 6 (lower is better)
Translates to: EKAVQSLSSWPT*VASKQSVKALS
Trigger: GCTCAGTGCTTTCACACTCTGCTTTGAAGCAACCAAAGTTGGCCATGAAGACAGTGATTGGACAGCTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
ENST00000541199.5
CDS CAA 90 bp GGTAGGAACCACAGCTTAGGTTGCTTTCAGCTTTCAGAGCTAGGTTaGGGATATTCCAGAAGTCATTTTGCCAGTCGACTACATTCCCTT +
Preference number: 6 (lower is better)
Translates to: GRNHSLGCFQLSELG*GYSRSHFASRLHSL
Trigger: AAGGGAATGTAGTCGACTGGCAAAATGACTTCTGGAATATCCCAAACCTAGCTCTGAAAGCTGAAAGCAACCTAAGCTGTGGTTCCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS CCA 72 bp CATTCAGACCTTGCCACTTCATGGACCAAGACCTCTTaGAAGCAGCAACTGCTAAGTGATCAGCAAGTTTTT +
Preference number: 6 (lower is better)
Translates to: HSDLATSWTKTS*KQQLLSDQQVF
Trigger: AAAAACTTGCTGATCACTTAGCAGTTGCTGCTTCCAAGAGGTCTTGGTCCATGAAGTGGCAAGGTCTGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463637.1
CDS CCA 72 bp GTTAAACTTAGCCAACATTCAGACCTTGCCACTTCATaGACCAAGACCTCTTGGAAGCAGCAACTGCTAAGT +
Preference number: 6 (lower is better)
Translates to: VKLSQHSDLATS*TKTSWKQQLLS
Trigger: ACTTAGCAGTTGCTGCTTCCAAGAGGTCTTGGTCCATGAAGTGGCAAGGTCTGAATGTTGGCTAAGTTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463637.1
CDS CAA 90 bp CAAACTCACCACAGCTTAGGTTGCTTTCAGCTTTCAGAGCTAGGTTaGGGATATTCCAGAAGTCATTTTGCCAGTCGACTACATTCCCTT +
Preference number: 6 (lower is better)
Translates to: QTHHSLGCFQLSELG*GYSRSHFASRLHSL
Trigger: AAGGGAATGTAGTCGACTGGCAAAATGACTTCTGGAATATCCCAAACCTAGCTCTGAAAGCTGAAAGCAACCTAAGCTGTGGTGAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415128.6
CDS CCA 72 bp GGTTGCTTCAAAGCAGAGTGTGAAAGCACTGAGCTCTaGAATAGAGATGCTTTTTGCAACAGATACCTGGTA +
Preference number: 6 (lower is better)
Translates to: GCFKAECESTEL*NRDAFCNRYLV
Trigger: TACCAGGTATCTGTTGCAAAAAGCATCTCTATTCCAGAGCTCAGTGCTTTCACACTCTGCTTTGAAGCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
ENST00000541199.5
CDS CCA 72 bp TCTGTTAGTAACAGGCATGTTAGTGGTGACAGTGGGTaGTGTAGTACTAGGAGAGTTTACAGTAGCTTGACA +
Preference number: 6 (lower is better)
Translates to: SVSNRHVSGDSG*CSTRRVYSSLT
Trigger: TGTCAAGCTACTGTAAACTCTCCTAGTACTACACCACCCACTGTCACCACTAACATGCCTGTTACTAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230173.10
ENST00000367609.8
CDS CCA 72 bp GTTGGAGATATCAACAGGTCCCCAGTAGGTTACCAATaGGTTGGTAGCATTGTAAAAACATATCCGAGAAGC +
Preference number: 6 (lower is better)
Translates to: VGDINRSPVGYQ*VGSIVKTYPRS
Trigger: GCTTCTCGGATATGTTTTTACAATGCTACCAACCCATTGGTAACCTACTGGGGACCTGTTGATATCTCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS CCA 72 bp ACTTCCCTTTGTATCTACAGTAGTCACTGCAACTCCTaGATAAACCCCTACAGACAGAGCTGTAGATCTCAT +
Preference number: 6 (lower is better)
Translates to: TSLCIYSSHCNS*INPYRQSCRSH
Trigger: ATGAGATCTACAGCTCTGTCTGTAGGGGTTTATCCAGGAGTTGCAGTGACTACTGTAGATACAAAGGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538281.1
CDS CAA 72 bp CACAGCTTAGGTTGCTTTCAGCTTTCAGAGCTAGGTTaGGGATATTCCAGAAGTCATTTTGCCAGTCGACTA +
Preference number: 6 (lower is better)
Translates to: HSLGCFQLSELG*GYSRSHFASRL
Trigger: TAGTCGACTGGCAAAATGACTTCTGGAATATCCCAAACCTAGCTCTGAAAGCTGAAAGCAACCTAAGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
CDS GCA 72 bp TTCAGAGCTAGGTTTGGGATATTCCAGAAGTCATTTTaGCAGTCGACTACATTCCCTTTCACATTACAGCTG +
Preference number: 6 (lower is better)
Translates to: FRARFGIFQKSF*QSTTFPFTLQL
Trigger: CAGCTGTAATGTGAAAGGGAATGTAGTCGACTGGCAAAATGACTTCTGGAATATCCCAAACCTAGCTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
CDS GCA 72 bp AAAAGGAATACGCTACAAACTCACCACAGCTTAGGTTaGTTTCAGCTTTCAGAGCTAGGTTTGGGATATTCC +
Preference number: 6 (lower is better)
Translates to: KRNTLQTHHSLG*FQLSELGLGYS
Trigger: GGAATATCCCAAACCTAGCTCTGAAAGCTGAAAGCAACCTAAGCTGTGGTGAGTTTGTAGCGTATTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415128.6
CDS CCA 72 bp AAAACATATCCGAGAAGCAGAAAAGCCAGGCTTGTCTaGACAAGGAAGAACGTATTCAGAAGGTTGGATAGA +
Preference number: 6 (lower is better)
Translates to: KTYPRSRKARLV*TRKNVFRRLDR
Trigger: TCTATCCAACCTTCTGAATACGTTCTTCCTTGTCCAGACAAGCCTGGCTTTTCTGCTTCTCGGATATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS CAA 90 bp AAGGACACATGCATCTCATTCGCACTTGAGTTAAATGATAGGCCTTaGGCAGTTGCTCCACAAAATTTAGTCTGGCTCTCTCCATTATCA +
Preference number: 6 (lower is better)
Translates to: KDTCISFALELNDRP*AVAPQNLVWLSPLS
Trigger: TGATAATGGAGAGAGCCAGACTAAATTTTGTGGAGCAACTGCCAAAGGCCTATCATTTAACTCAAGTGCGAATGAGATGCATGTGTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
ENST00000435011.6
ENST00000541199.5
ENST00000545477.1
CDS CAA 72 bp AAAAAGGAATACGCTACAAACTCACCACAGCTTAGGTaGCTTTCAGCTTTCAGAGCTAGGTTTGGGATATTC +
Preference number: 6 (lower is better)
Translates to: KKEYATNSPQLR*LSAFRARFGIF
Trigger: GAATATCCCAAACCTAGCTCTGAAAGCTGAAAGCAACCTAAGCTGTGGTGAGTTTGTAGCGTATTCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415128.6
CDS CAA 72 bp TTCCCTTTCACATTACAGCTGAGGTTGGAGAGGATTTaGGCATTCATGGTAAAATTCCAAAGTCGAAAGTTA +
Preference number: 6 (lower is better)
Translates to: FPFTLQLRLERI*AFMVKFQSRKL
Trigger: TAACTTTCGACTTTGGAATTTTACCATGAATGCCAAAATCCTCTCCAACCTCAGCTGTAATGTGAAAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000415128.6
CDS CAA 72 bp AACCACTGGCTCATTACCTGGAAATACGATTCATTATaGCTTGGAAGACCAATGCTAAAATTTGAAATTGCA +
Preference number: 6 (lower is better)
Translates to: NHWLITWKYDSL*LGRPMLKFEIA
Trigger: TGCAATTTCAAATTTTAGCATTGGTCTTCCAAGCAATAATGAATCGTATTTCCAGGTAATGAGCCAGTGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463637.1
CDS CAA 72 bp CCACTCTCAAAATCCATCTGGAAATACGATTCATTATaGCTTGGAAGACCAATGCTAAAATTTGAAATTGCA +
Preference number: 6 (lower is better)
Translates to: PLSKSIWKYDSL*LGRPMLKFEIA
Trigger: TGCAATTTCAAATTTTAGCATTGGTCTTCCAAGCAATAATGAATCGTATTTCCAGATGGATTTTGAGAGTGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
CDS CAA 72 bp GATTTTCCTAGATTATCAGAACTTTTCTTGATGATATaGGTAGCTGTCTTACTCCAATCTGAGTTATCTGCT +
Preference number: 6 (lower is better)
Translates to: DFPRLSELFLMI*VAVLLQSELSA
Trigger: AGCAGATAACTCAGATTGGAGTAAGACAGCTACCAATATCATCAAGAAAAGTTCTGATAATCTAGGAAAATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230173.10
ENST00000296932.13
ENST00000367608.6
ENST00000367609.8
ENST00000472054.2