RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRG5 (Homo sapiens)

Ensembl gene IDs: ENSG00000159618

Ensembl transcript IDs: ENST00000340339.4, ENST00000349457.8, ENST00000394361.8, ENST00000564607.1, ENST00000564983.5, ENST00000569839.1, ENST00000615867.4

Found 428 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGGAAGGTGGCAGGGCCAAGCAGGTGCTTCCAGGGCAGCCTGAATaGGATCCTGCCCCTAGCAAGCAGGTGGAGGCCGCGGGAATTCCC +
Preference number: 1 (lower is better)
Translates to: EEGGRAKQVLPGQPE*DPAPSKQVEAAGIP
Trigger: GGGAATTCCCGCGGCCTCCACCTGCTTGCTAGGGGCAGGATCTCATTCAGGCTGCCCTGGAAGCACCTGCTTGGCCCTGCCACCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR GCA 90 bp TGCCATCTGGCCCTCCCCTGGAGGAAGGTGGCAGGGCCAAGCAGGTaGTTCCAGGGCAGCCTGAATGAGATCCTGCCCCTAGCAAGCAGG +
Preference number: 1 (lower is better)
Translates to: CHLALPWRKVAGPSR*FQGSLNEILPLASR
Trigger: CCTGCTTGCTAGGGGCAGGATCTCATTCAGGCTGCCCTGGAAGCACCTGCTTGGCCCTGCCACCTTCCTCCAGGGGAGGGCCAGATGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 90 bp GCCCCCAAGAAAACTGCGGGATGGGCTACTGGTCCAGATGGTCTATaGAAGTCTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGG +
Preference number: 1 (lower is better)
Translates to: APKKTAGWATGPDGL*KSWEHRRRSLWERR
Trigger: CCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACTTCCATAGACCATCTGGACCAGTAGCCCATCCCGCAGTTTTCTTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 90 bp CCAGATGGTCTATGGAAGTCTTGGGAGCACCGCAGGAGGAGCCTCTaGGAACGGCGGAACCTCCCAATCTTTGGGAAGGGTGGGCTTGGA +
Preference number: 1 (lower is better)
Translates to: PDGLWKSWEHRRRSL*ERRNLPIFGKGGLG
Trigger: TCCAAGCCCACCCTTCCCAAAGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACTTCCATAGACCATCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 90 bp AAAACTGCGGGATGGGCTACTGGTCCAGATGGTCTATGGAAGTCTTaGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCA +
Preference number: 1 (lower is better)
Translates to: KTAGWATGPDGLWKS*EHRRRSLWERRNLP
Trigger: TGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACTTCCATAGACCATCTGGACCAGTAGCCCATCCCGCAGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR GCA 90 bp AGACAGTCCTTGAAACTTGGCTTCCTGATGCCCAGGCTGGTGCTCTaGCCACATCCCTGGCGAGCTGGGCCCAGGTACCAGGACAAAGTT +
Preference number: 1 (lower is better)
Translates to: RQSLKLGFLMPRLVL*PHPWRAGPRYQDKV
Trigger: AACTTTGTCCTGGTACCTGGGCCCAGCTCGCCAGGGATGTGGGCAGAGCACCAGCCTGGGCATCAGGAAGCCAAGTTTCAAGGACTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 90 bp TTCCTCTGCCCCCAAGAAAACTGCGGGATGGGCTACTGGTCCAGATaGTCTATGGAAGTCTTGGGAGCACCGCAGGAGGAGCCTCTGGGA +
Preference number: 1 (lower is better)
Translates to: FLCPQENCGMGYWSR*SMEVLGAPQEEPLG
Trigger: TCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACTTCCATAGACCATCTGGACCAGTAGCCCATCCCGCAGTTTTCTTGGGGGCAGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR TCA 90 bp GTTACGGCCCCTCCAGCTGGTGCATGGGGTCTGCAAACAGGTGTTTaGGCGATTCTAGATGCAGTCTTGGCGCCAAGGGCCTCTGAGTGT +
Preference number: 1 (lower is better)
Translates to: VTAPPAGAWGLQTGV*AILDAVLAPRASEC
Trigger: ACACTCAGAGGCCCTTGGCGCCAAGACTGCATCTAGAATCGCTCAAACACCTGTTTGCAGACCCCATGCACCAGCTGGAGGGGCCGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 90 bp AGGCCCAAGGTCATACAGACAGACTCAAAGACAGTCCTTGAAACTTaGCTTCCTGATGCCCAGGCTGGTGCTCTGCCCACATCCCTGGCG +
Preference number: 1 (lower is better)
Translates to: RPKVIQTDSKTVLET*LPDAQAGALPTSLA
Trigger: CGCCAGGGATGTGGGCAGAGCACCAGCCTGGGCATCAGGAAGCCAAGTTTCAAGGACTGTCTTTGAGTCTGTCTGTATGACCTTGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 90 bp GCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTTTaGGAAGGGTGGGCTTGGACTTGGAGTCATCATAATTTAGGGAGT +
Preference number: 1 (lower is better)
Translates to: APQEEPLGTAEPPNL*EGWAWTWSHHNLGS
Trigger: ACTCCCTAAATTATGATGACTCCAAGTCCAAGCCCACCCTTCCCAAAGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATaGCCGTGTAAGCGTGTCTTGCCTTTCCTCCTGGAGGAAATGGGT +
Preference number: 1 (lower is better)
Translates to: PPRAKVHRRIGKRDK*PCKRVLPFLLEEMG
Trigger: ACCCATTTCCTCCAGGAGGAAAGGCAAGACACGCTTACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 90 bp CCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTaGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCGTTTTCCTC +
Preference number: 1 (lower is better)
Translates to: PGQIQSCPITKQPGH*DPADSAGGERSVFL
Trigger: GAGGAAAACGCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 90 bp TATGGCCTGAGCTTCGAATTTAAAACCCACACTCTCACGCCTACCTaGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTG +
Preference number: 1 (lower is better)
Translates to: YGLSFEFKTHTLTPT*ANSILPNHQTARTL
Trigger: CAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTGTGGGTTTTAAATTCGAAGCTCAGGCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 90 bp TTCTGGGAAACGCACTGGCTTCATGAGCACTGTCTCATGAAGGTCTaGGGTAAGGGTGATTCTCTGAAACTATGGCCTGAGCTTCGAATT +
Preference number: 1 (lower is better)
Translates to: FWETHWLHEHCLMKV*GKGDSLKLWPELRI
Trigger: AATTCGAAGCTCAGGCCATAGTTTCAGAGAATCACCCTTACCCCAGACCTTCATGAGACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp TCTGCCTGTGACCTTCGAGGTCATCAAAACGGCCCAGTGGCCTGGGGCAGGGCCGTAGCCTCAGGCTACTaGCGGCCAGAGAGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: SACDLRGHQNGPVAWGRAVASGY*RPERLR
Trigger: CCTCAGCCTCTCTGGCCGCCAGTAGCCTGAGGCTAC...GGCCCTGCCCCAGGCCACTGGGCCGTTTTGATGACCTCGAAGGTCACAGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR TCA 90 bp TCTGCCTGTGACCTTCGAGGTCATCAAAACGGCCCAGTGGCCTGGGGCAGGGCCCCAGGGCAGCCTGAATaGGATCCTGCCCCTAGCAAG +
Preference number: 2 (lower is better)
Translates to: SACDLRGHQNGPVAWGRAPGQPE*DPAPSK
Trigger: CTTGCTAGGGGCAGGATCTCATTCAGGCTGCCCTGG...GGCCCTGCCCCAGGCCACTGGGCCGTTTTGATGACCTCGAAGGTCACAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR GCA 90 bp TCTGCCTGTGACCTTCGAGGTCATCAAAACGGCCCAGTGGCCTGGGGCAGGGCCAGCACCCTGCTCTGGTaGCAGCTATGTCTGGGGTGC +
Preference number: 2 (lower is better)
Translates to: SACDLRGHQNGPVAWGRASTLLW*QLCLGC
Trigger: GCACCCCAGACATAGCTGGCACCAGAGCAGGGTGCT...GGCCCTGCCCCAGGCCACTGGGCCGTTTTGATGACCTCGAAGGTCACAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp TCTGCCTGTGACCTTCGAGGTCATCAAAACGGCCCAGTGGCCTGGGGCAGGGCCACATCCCTGGCGAGCTaGGCCCAGGTACCAGGACAA +
Preference number: 2 (lower is better)
Translates to: SACDLRGHQNGPVAWGRATSLAS*AQVPGQ
Trigger: TTGTCCTGGTACCTGGGCCCAGCTCGCCAGGGATGT...GGCCCTGCCCCAGGCCACTGGGCCGTTTTGATGACCTCGAAGGTCACAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp CTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTTTGCCCCTAGCAAGCAGGTaGAGGCCGCGGGAATTCCCA +
Preference number: 2 (lower is better)
Translates to: LGSTAGGASGNGGTSQSLPLASR*RPREFP
Trigger: TGGGAATTCCCGCGGCCTCCACCTGCTTGCTAGGGG...CAAAGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp TGCTCTGGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGAAAGTGCACCGAGCCAGGATGCCATCTaGCCCTCCCCTGGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: CSGASYVWGAAPKSESAPSQDAI*PSPGGR
Trigger: CCTTCCTCCAGGGGAGGGCCAGATGGCATCCTGGCT...CGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR TCA 90 bp AGTCTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTGCTCCTGGGTTAGGCTaGAACAAAGCCGCTTGCCCC +
Preference number: 2 (lower is better)
Translates to: SLGSTAGGASGNGGTSQSAPGLG*NKAACP
Trigger: GGGGCAAGCGGCTTTGTTTCAGCCTAACCCAGGAGC...AGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR TCA 90 bp CTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTTTGATTCCCACCCCACGCTaGCACTCTTCCCCCTGGTCT +
Preference number: 2 (lower is better)
Translates to: LGSTAGGASGNGGTSQSLIPTPR*HSSPWS
Trigger: AGACCAGGGGGAAGAGTGTCAGCGTGGGGTGGGAAT...CAAAGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR TCA 90 bp CTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTTTGCCAGGGCAGCCTGAATaGGATCCTGCCCCTAGCAAG +
Preference number: 2 (lower is better)
Translates to: LGSTAGGASGNGGTSQSLPGQPE*DPAPSK
Trigger: CTTGCTAGGGGCAGGATCTCATTCAGGCTGCCCTGG...CAAAGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR GCA 90 bp TGCTCTGGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGAAAGTGCACCGATGCCTTCCCCTCAGTaGCTGGAGAGGCCGTGGAAG +
Preference number: 2 (lower is better)
Translates to: CSGASYVWGAAPKSESAPMPSPQ*LERPWK
Trigger: CTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCAT...CGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR GCA 90 bp AGTCTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTATGCCTTCCCCTCAGTaGCTGGAGAGGCCGTGGAAG +
Preference number: 2 (lower is better)
Translates to: SLGSTAGGASGNGGTSQSMPSPQ*LERPWK
Trigger: CTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCAT...AGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp TGCTCTGGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGAAAGTGCACCGGAGAGGCCGTGGAAGTaGAAAAGGCCCCTTGGCGGT +
Preference number: 2 (lower is better)
Translates to: CSGASYVWGAAPKSESAPERPWK*KRPLGG
Trigger: ACCGCCAAGGGGCCTTTTCCACTTCCACGGCCTCTC...CGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp CTGAATGAGATCCTGCCCCTAGCAAGCAGGTGGAGGCCGCGGGAATTCCCACCCACATCCCTGGCGAGCTaGGCCCAGGTACCAGGACAA +
Preference number: 2 (lower is better)
Translates to: LNEILPLASRWRPREFPPTSLAS*AQVPGQ
Trigger: TTGTCCTGGTACCTGGGCCCAGCTCGCCAGGGATGT...GGGTGGGAATTCCCGCGGCCTCCACCTGCTTGCTAGGGGCAGGATCTCATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CAA 90 bp GAAAACTGCGGGATGGGCTACTGGTCCAGATGGTCTATGGAAGTCTaGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCC +
Preference number: 2 (lower is better)
Translates to: ENCGMGYWSRWSMEV*GAPQEEPLGTAEPP
Trigger: GGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACTTCCATAGACCATCTGGACCAGTAGCCCATCCCGCAGTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTCATCTGGCCCTCCCCTaGAGGAAGGTGGCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCHLALP*RKVAGP
Trigger: TGGCCCTGCCACCTTCCTCCAGGGGAGGGCCAGATG...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp ACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCACTGGCTTCATGAGCACTGTCGTAGCCTCAGGCTACTaGCGGCCAGAGAGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: TVPPSVRSGKRTGFMSTVVASGY*RPERLR
Trigger: CCTCAGCCTCTCTGGCCGCCAGTAGCCTGAGGCTAC...GACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAACGAACACTAGGCGGCACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp TCTGCCTGTGACCTTCGAGGTCATCAAAACGGCCCAGTGGCCTGGGGCAGGGCCTGCGGGATGGGCTACTaGTCCAGATGGTCTATGGAA +
Preference number: 2 (lower is better)
Translates to: SACDLRGHQNGPVAWGRACGMGY*SRWSME
Trigger: TTCCATAGACCATCTGGACCAGTAGCCCATCCCGCA...GGCCCTGCCCCAGGCCACTGGGCCGTTTTGATGACCTCGAAGGTCACAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp TCTGCCTGTGACCTTCGAGGTCATCAAAACGGCCCAGTGGCCTGGGGCAGGGCCAGTGCACCGCCGCATTaGGAAAAGAGACAAATGGCC +
Preference number: 2 (lower is better)
Translates to: SACDLRGHQNGPVAWGRASAPPH*EKRQMA
Trigger: GGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACT...GGCCCTGCCCCAGGCCACTGGGCCGTTTTGATGACCTCGAAGGTCACAGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR GCA 90 bp TGCTCTGGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGAAAGTGCACCGCTGGTGCATGGGGTCTaGAAACAGGTGTTTGAGCGA +
Preference number: 2 (lower is better)
Translates to: CSGASYVWGAAPKSESAPLVHGV*KQVFER
Trigger: TCGCTCAAACACCTGTTTGCAGACCCCATGCACCAG...CGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp TCTGCCTGTGACCTTCGAGGTCATCAAAACGGCCCAGTGGCCTGGGGCAGGGCCTCTTGCCTTTCCTCCTaGAGGAAATGGGTCACTCAG +
Preference number: 2 (lower is better)
Translates to: SACDLRGHQNGPVAWGRASCLSS*RKWVTQ
Trigger: CTGAGTGACCCATTTCCTCCAGGAGGAAAGGCAAGA...GGCCCTGCCCCAGGCCACTGGGCCGTTTTGATGACCTCGAAGGTCACAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR GCA 90 bp ACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCACTGGCTTCATGAGCACTGTCGGAGAGGTAGAGCAATaGCTTCCCCTCAGTGCCTGG +
Preference number: 2 (lower is better)
Translates to: TVPPSVRSGKRTGFMSTVGEVEQ*LPLSAW
Trigger: CCAGGCACTGAGGGGAAGGCATTGCTCTACCTCTCC...GACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAACGAACACTAGGCGGCACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR GCA 90 bp TGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTGGGATCCAGCCCCAGGCTGGTGCTCTaGCCACATCCCTGGCGAGCT +
Preference number: 2 (lower is better)
Translates to: WANSILPNHQTARTLGSSPRLVL*PHPWRA
Trigger: AGCTCGCCAGGGATGTGGGCAGAGCACCAGCCTGGG...GCTGGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR GCA 90 bp AAGCGTGTCTTGCCTTTCCTCCTGGAGGAAATGGGTCACTCAGTAGGCGCAGTCGCAGGGCCAAGCAGGTaGTTCCAGGGCAGCCTGAAT +
Preference number: 2 (lower is better)
Translates to: KRVLPFLLEEMGHSVGAVAGPSR*FQGSLN
Trigger: ATTCAGGCTGCCCTGGAAGCACCTGCTTGGCCCTGC...GACTGCGCCTACTGAGTGACCCATTTCCTCCAGGAGGAAAGGCAAGACACGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp TGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTGGGATCCAGCCCTTGGCGGTCACAGTaGCCTCTGGGGTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: WANSILPNHQTARTLGSSPWRSQ*PLGSSS
Trigger: GCTGCTGGACCCCAGAGGCCACTGTGACCGCCAAGG...GCTGGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTTGCCTGGAGAGGCCGTaGAAGTGGAAAAGGCCCCTT +
Preference number: 2 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCCLERP*KWKRPL
Trigger: AAGGGGCCTTTTCCACTTCCACGGCCTCTCCAGGCA...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp TGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTGGGATCCAGCCATCTGGCCCTCCCCTaGAGGAAGGTGGCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: WANSILPNHQTARTLGSSHLALP*RKVAGP
Trigger: TGGCCCTGCCACCTTCCTCCAGGGGAGGGCCAGATG...GCTGGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp TGCTCTGGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGAAAGTGCACCGGGCTACTGGTCCAGATaGTCTATGGAAGTCTTGGGA +
Preference number: 2 (lower is better)
Translates to: CSGASYVWGAAPKSESAPGYWSR*SMEVLG
Trigger: TCCCAAGACTTCCATAGACCATCTGGACCAGTAGCC...CGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp CACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGAGCCAGGATGCCATCTaGCCCTCCCCTGGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: HSHAYLGKFNLAQSPNSQSQDAI*PSPGGR
Trigger: CCTTCCTCCAGGGGAGGGCCAGATGGCATCCTGGCT...CTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCAACTCTCACGCCTACCTaGGCAAATTCAATCTTGCCC +
Preference number: 2 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNATLTPT*ANSILP
Trigger: GGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGT...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp TGCTCTGGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGAAAGTGCACCGTGTCTCATGAAGGTCTaGGGTAAGGGTGATTCTCTG +
Preference number: 2 (lower is better)
Translates to: CSGASYVWGAAPKSESAPCLMKV*GKGDSL
Trigger: CAGAGAATCACCCTTACCCCAGACCTTCATGAGACA...CGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CAA 90 bp CACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTAAGCGTGTCTaGCCTTTCCTCCTGGAGGAAATGGGTCACTCAGTAGGCGCAGTC +
Preference number: 2 (lower is better)
Translates to: HRRIGKRDKWPCKRV*PFLLEEMGHSVGAV
Trigger: GACTGCGCCTACTGAGTGACCCATTTCCTCCAGGAGGAAAGGCAAGACACGCTTACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR TCA 90 bp CACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGCTCCTGGGTTAGGCTaGAACAAAGCCGCTTGCCCC +
Preference number: 2 (lower is better)
Translates to: HSHAYLGKFNLAQSPNSQAPGLG*NKAACP
Trigger: GGGGCAAGCGGCTTTGTTTCAGCCTAACCCAGGAGC...CTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR TCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTATGAGCACTGTCTCATaGAGGTCTGGGGTAAGGGTG +
Preference number: 2 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCMSTVS*RSGVRV
Trigger: CACCCTTACCCCAGACCTTCATGAGACAGTGCTCAT...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR GCA 90 bp TGCTCTGGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGAAAGTGCACCGGGGCAAATTCAATCTTaGCCAATCACCAAACAGCCA +
Preference number: 2 (lower is better)
Translates to: CSGASYVWGAAPKSESAPGQIQS*PITKQP
Trigger: TGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCC...CGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp TTCTGGGAAACGCACTGGCTTCATGAGCACTGTCTCATGAAGGTCTGGGGTAAGGTGGAAAAGGCCCCTTaGCGGTCACAGTGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: FWETHWLHEHCLMKVWGKVEKAP*RSQWPL
Trigger: CAGAGGCCACTGTGACCGCCAAGGGGCCTTTTCCAC...CTTACCCCAGACCTTCATGAGACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp CACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGAGAGGCCGTGGAAGTaGAAAAGGCCCCTTGGCGGT +
Preference number: 2 (lower is better)
Translates to: HSHAYLGKFNLAQSPNSQERPWK*KRPLGG
Trigger: ACCGCCAAGGGGCCTTTTCCACTTCCACGGCCTCTC...CTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp ACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCACTGGCTTCATGAGCACTGTCGAACCTCCCAATCTTTaGGAAGGGTGGGCTTGGACT +
Preference number: 2 (lower is better)
Translates to: TVPPSVRSGKRTGFMSTVEPPNL*EGWAWT
Trigger: AGTCCAAGCCCACCCTTCCCAAAGATTGGGAGGTTC...GACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAACGAACACTAGGCGGCACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTTGCGGGATGGGCTACTaGTCCAGATGGTCTATGGAA +
Preference number: 2 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCCGMGY*SRWSME
Trigger: TTCCATAGACCATCTGGACCAGTAGCCCATCCCGCA...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR GCA 90 bp GGGAAAAGAGACAAATGGCCGTGTAAGCGTGTCTTGCCTTTCCTCCTGGAGGAAGGAGAGGTAGAGCAATaGCTTCCCCTCAGTGCCTGG +
Preference number: 2 (lower is better)
Translates to: GKRDKWPCKRVLPFLLEEGEVEQ*LPLSAW
Trigger: CCAGGCACTGAGGGGAAGGCATTGCTCTACCTCTCC...TTCCTCCAGGAGGAAAGGCAAGACACGCTTACACGGCCATTTGTCTCTTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp CCCACACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGTGCCTGGAGAGGCCGTaGAAGTGGAAAAGGCCCCTT +
Preference number: 2 (lower is better)
Translates to: PTLSRLPGQIQSCPITKQCLERP*KWKRPL
Trigger: AAGGGGCCTTTTCCACTTCCACGGCCTCTCCAGGCA...CTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp TCTGCCTGTGACCTTCGAGGTCATCAAAACGGCCCAGTGGCCTGGGGCAGGGCCTTTTTACTAAGCTCCTaGGTTAGGCTGAAACAAAGC +
Preference number: 2 (lower is better)
Translates to: SACDLRGHQNGPVAWGRAFLLSS*VRLKQS
Trigger: GCTTTGTTTCAGCCTAACCCAGGAGCTTAGTAAAAA...GGCCCTGCCCCAGGCCACTGGGCCGTTTTGATGACCTCGAAGGTCACAGGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp CAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCGTTTTCCTCTGGTCTATGGAAGTCTTaGGAGCACCGCAGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: QDTGIQLIQLEEKEAFSSGLWKS*EHRRRS
Trigger: GCTCCTCCTGCGGTGCTCCCAAGACTTCCATAGACC...AGAGGAAAACGCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR TCA 90 bp ACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCACTGGCTTCATGAGCACTGTCGTAAGGGTGATTCTCTaGAACTATGGCCTGAGCTTC +
Preference number: 2 (lower is better)
Translates to: TVPPSVRSGKRTGFMSTVVRVIL*NYGLSF
Trigger: GAAGCTCAGGCCATAGTTTCAGAGAATCACCCTTAC...GACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAACGAACACTAGGCGGCACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp ATGCAATTTTTACTAAGCTCCTGGGTTAGGCTGAAACAAAGCCGCTTGCCCCCAGTGGAAAAGGCCCCTTaGCGGTCACAGTGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: MQFLLSSWVRLKQSRLPPVEKAP*RSQWPL
Trigger: CAGAGGCCACTGTGACCGCCAAGGGGCCTTTTCCAC...TGGGGGCAAGCGGCTTTGTTTCAGCCTAACCCAGGAGCTTAGTAAAAATTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp TGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTGGGATCCAGCGGTCCAGATGGTCTATaGAAGTCTTGGGAGCACCGC +
Preference number: 2 (lower is better)
Translates to: WANSILPNHQTARTLGSSGPDGL*KSWEHR
Trigger: GCGGTGCTCCCAAGACTTCCATAGACCATCTGGACC...GCTGGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR GCA 90 bp GGGAAAAGAGACAAATGGCCGTGTAAGCGTGTCTTGCCTTTCCTCCTGGAGGAATTGAGCGATTCTAGATaGAGTCTTGGCGCCAAGGGC +
Preference number: 2 (lower is better)
Translates to: GKRDKWPCKRVLPFLLEELSDSR*SLGAKG
Trigger: GCCCTTGGCGCCAAGACTGCATCTAGAATCGCTCAA...TTCCTCCAGGAGGAAAGGCAAGACACGCTTACACGGCCATTTGTCTCTTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp CAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCGTTTTCCTCTGAACCTCCCAATCTTTaGGAAGGGTGGGCTTGGACT +
Preference number: 2 (lower is better)
Translates to: QDTGIQLIQLEEKEAFSSEPPNL*EGWAWT
Trigger: AGTCCAAGCCCACCCTTCCCAAAGATTGGGAGGTTC...AGAGGAAAACGCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp CACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGAAGAAAACTGCGGGATaGGCTACTGGTCCAGATGGT +
Preference number: 2 (lower is better)
Translates to: HSHAYLGKFNLAQSPNSQKKTAG*ATGPDG
Trigger: ACCATCTGGACCAGTAGCCCATCCCGCAGTTTTCTT...CTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp TGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTGGGATCCAGCAATCTTTGGGAAGGGTaGGCTTGGACTTGGAGTCAT +
Preference number: 2 (lower is better)
Translates to: WANSILPNHQTARTLGSSNLWEG*AWTWSH
Trigger: ATGACTCCAAGTCCAAGCCCACCCTTCCCAAAGATT...GCTGGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CCA 90 bp CCCACACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGAATCTTTGGGAAGGGTaGGCTTGGACTTGGAGTCAT +
Preference number: 2 (lower is better)
Translates to: PTLSRLPGQIQSCPITKQNLWEG*AWTWSH
Trigger: ATGACTCCAAGTCCAAGCCCACCCTTCCCAAAGATT...CTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CAA 90 bp ATGCAATTTTTACTAAGCTCCTGGGTTAGGCTGAAACAAAGCCGCTaGCCCCCATGTCACAGCTGTGGATACCTAGGGTCTGTGAGAAGT +
Preference number: 2 (lower is better)
Translates to: MQFLLSSWVRLKQSR*PPCHSCGYLGSVRS
Trigger: ACTTCTCACAGACCCTAGGTATCCACAGCTGTGACATGGGGGCAAGCGGCTTTGTTTCAGCCTAACCCAGGAGCTTAGTAAAAATTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR GCA 72 bp AGAGCCTGGGTAGGTCCCACCCGCCCCAAGCCAGGATaGCATCTGGCCCTCCCCTGGAGGAAGGTGGCAGGG +
Preference number: 3 (lower is better)
Translates to: RAWVGPTRPKPG*HLALPWRKVAG
Trigger: CCCTGCCACCTTCCTCCAGGGGAGGGCCAGATGGCATCCTGGCTTGGGGCGGGTGGGACCTACCCAGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR TCA 72 bp GGCAGGGCCAAGCAGGTGCTTCCAGGGCAGCCTGAATaGGATCCTGCCCCTAGCAAGCAGGTGGAGGCCGCG +
Preference number: 3 (lower is better)
Translates to: GRAKQVLPGQPE*DPAPSKQVEAA
Trigger: CGCGGCCTCCACCTGCTTGCTAGGGGCAGGATCTCATTCAGGCTGCCCTGGAAGCACCTGCTTGGCCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR GCA 72 bp GCCCTGAGCACCCACCACCTGAGCACCCTGCTCTGGTaGCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGA +
Preference number: 3 (lower is better)
Translates to: ALSTHHLSTLLW*QLCLGCSPQER
Trigger: TCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCAGGGTGCTCAGGTGGTGGGTGCTCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 72 bp AGGGCCCTGAGCACCCACCACCTGAGCACCCTGCTCTaGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAG +
Preference number: 3 (lower is better)
Translates to: RALSTHHLSTLL*CQLCLGCSPQE
Trigger: CTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCAGGGTGCTCAGGTGGTGGGTGCTCAGGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR GCA 72 bp CTGAGCACCCTGCTCTGGTGCCAGCTATGTCTGGGGTaGAGCCCCCAAGAGCGAAAGTGCACCGCCGCATTG +
Preference number: 3 (lower is better)
Translates to: LSTLLWCQLCLG*SPQERKCTAAL
Trigger: CAATGCGGCGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCAGGGTGCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CAA 90 bp AGTCTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTAGTGGAAAAGGCCCCTaGGCGGTCACAGTGGCCTCT +
Preference number: 3 (lower is better)
Translates to: SLGSTAGGASGNGGTSQSSGKGP*AVTVAS
Trigger: AGAGGCCACTGTGACCGCCAAGGGGCCTTTTCCACT...AGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 72 bp GGATGGGCTACTGGTCCAGATGGTCTATGGAAGTCTTaGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGG +
Preference number: 3 (lower is better)
Translates to: GWATGPDGLWKS*EHRRRSLWERR
Trigger: CCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACTTCCATAGACCATCTGGACCAGTAGCCCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR GCA 72 bp TCTTGGCGCCAAGGGCCTCTGAGTGTGGACCAACGGTaGCGCCTAGTGTTCGTTCTGGGAAACGCACTGGCT +
Preference number: 3 (lower is better)
Translates to: SWRQGPLSVDQR*RLVFVLGNALA
Trigger: AGCCAGTGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCCTTGGCGCCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CAA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCATGGTCTATGGAAGTCTaGGGAGCACCGCAGGAGGAG +
Preference number: 3 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNAWSMEV*GAPQEE
Trigger: CTCCTCCTGCGGTGCTCCCAAGACTTCCATAGACCA...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 72 bp CTATGGAAGTCTTGGGAGCACCGCAGGAGGAGCCTCTaGGAACGGCGGAACCTCCCAATCTTTGGGAAGGGT +
Preference number: 3 (lower is better)
Translates to: LWKSWEHRRRSL*ERRNLPIFGKG
Trigger: ACCCTTCCCAAAGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACTTCCATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CAA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTCTGCCCCAGGTAAGGTaGGATCTGCCCCGGAGCAAA +
Preference number: 3 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCLPQVR*DLPRSK
Trigger: TTTGCTCCGGGGCAGATCCAACCTTACCTGGGGCAG...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 72 bp AAAACTGCGGGATGGGCTACTGGTCCAGATGGTCTATaGAAGTCTTGGGAGCACCGCAGGAGGAGCCTCTGG +
Preference number: 3 (lower is better)
Translates to: KTAGWATGPDGL*KSWEHRRRSLW
Trigger: CCAGAGGCTCCTCCTGCGGTGCTCCCAAGACTTCCATAGACCATCTGGACCAGTAGCCCATCCCGCAGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 72 bp CCCCAAGAAAACTGCGGGATGGGCTACTGGTCCAGATaGTCTATGGAAGTCTTGGGAGCACCGCAGGAGGAG +
Preference number: 3 (lower is better)
Translates to: PQENCGMGYWSR*SMEVLGAPQEE
Trigger: CTCCTCCTGCGGTGCTCCCAAGACTTCCATAGACCATCTGGACCAGTAGCCCATCCCGCAGTTTTCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CAA 90 bp GGGAAAAGAGACAAATGGCCGTGTAAGCGTGTCTTGCCTTTCCTCCTGGAGGAAAGTGGAAAAGGCCCCTaGGCGGTCACAGTGGCCTCT +
Preference number: 3 (lower is better)
Translates to: GKRDKWPCKRVLPFLLEESGKGP*AVTVAS
Trigger: AGAGGCCACTGTGACCGCCAAGGGGCCTTTTCCACT...TTCCTCCAGGAGGAAAGGCAAGACACGCTTACACGGCCATTTGTCTCTTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CAA 90 bp CAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCGTTTTCCTCTCTGCCCCAGGTAAGGTaGGATCTGCCCCGGAGCAAA +
Preference number: 3 (lower is better)
Translates to: QDTGIQLIQLEEKEAFSSLPQVR*DLPRSK
Trigger: TTTGCTCCGGGGCAGATCCAACCTTACCTGGGGCAG...AGAGGAAAACGCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 72 bp GAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTTTaGGAAGGGTGGGCTTGGACTTGGAGTCATCATAAT +
Preference number: 3 (lower is better)
Translates to: EEPLGTAEPPNL*EGWAWTWSHHN
Trigger: ATTATGATGACTCCAAGTCCAAGCCCACCCTTCCCAAAGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 72 bp GCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATaGCCGTGTAAGCGTGTCTTGCCTTTCCTCCTGGAG +
Preference number: 3 (lower is better)
Translates to: AKVHRRIGKRDK*PCKRVLPFLLE
Trigger: CTCCAGGAGGAAAGGCAAGACACGCTTACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 72 bp CTGGGAACGGCGGAACCTCCCAATCTTTGGGAAGGGTaGGCTTGGACTTGGAGTCATCATAATTTAGGGAGT +
Preference number: 3 (lower is better)
Translates to: LGTAEPPNLWEG*AWTWSHHNLGS
Trigger: ACTCCCTAAATTATGATGACTCCAAGTCCAAGCCCACCCTTCCCAAAGATTGGGAGGTTCCGCCGTTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CAA 90 bp TTCTGGGAAACGCACTGGCTTCATGAGCACTGTCTCATGAAGGTCTGGGGTAAGGTACCAGGACAAAGTTaGCTGCCCCAGGTAAGGTTG +
Preference number: 3 (lower is better)
Translates to: FWETHWLHEHCLMKVWGKVPGQS*LPQVRL
Trigger: CAACCTTACCTGGGGCAGCAAACTTTGTCCTGGTAC...CTTACCCCAGACCTTCATGAGACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CAA 90 bp AAGCGTGTCTTGCCTTTCCTCCTGGAGGAAATGGGTCACTCAGTAGGCGCAGTCTGGGCAAATTCAATCTaGCCCAATCACCAAACAGCC +
Preference number: 3 (lower is better)
Translates to: KRVLPFLLEEMGHSVGAVWANSI*PNHQTA
Trigger: GGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA...GACTGCGCCTACTGAGTGACCCATTTCCTCCAGGAGGAAAGGCAAGACACGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CAA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTTCTGCAAACAGGTGTTaGAGCGATTCTAGATGCAGT +
Preference number: 3 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCSANRC*SDSRCS
Trigger: ACTGCATCTAGAATCGCTCAAACACCTGTTTGCAGA...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 72 bp ATGTCACAGCTGTGGATACCTAGGGTCTGTGAGAAGTaGCAGGCCCAAGGTCATACAGACAGACTCAAAGAC +
Preference number: 3 (lower is better)
Translates to: MSQLWIPRVCEK*QAQGHTDRLKD
Trigger: GTCTTTGAGTCTGTCTGTATGACCTTGGGCCTGCCACTTCTCACAGACCCTAGGTATCCACAGCTGTGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 72 bp ACGCACTGGCTTCATGAGCACTGTCTCATGAAGGTCTaGGGTAAGGGTGATTCTCTGAAACTATGGCCTGAG +
Preference number: 3 (lower is better)
Translates to: THWLHEHCLMKV*GKGDSLKLWPE
Trigger: CTCAGGCCATAGTTTCAGAGAATCACCCTTACCCCAGACCTTCATGAGACAGTGCTCATGAAGCCAGTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 72 bp ATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTaGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGC +
Preference number: 3 (lower is better)
Translates to: IQSCPITKQPGH*DPADSAGGERS
Trigger: GCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR-3UTR CAA 90 bp CCCACACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGACTCAAAGACAGTCCTaGAAACTTGGCTTCCTGATG +
Preference number: 3 (lower is better)
Translates to: PTLSRLPGQIQSCPITKQTQRQS*KLGFLM
Trigger: CATCAGGAAGCCAAGTTTCAAGGACTGTCTTTGAGT...CTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CCA 72 bp AGCTTCGAATTTAAAACCCACACTCTCACGCCTACCTaGGCAAATTCAATCTTGCCCAATCACCAAACAGCC +
Preference number: 3 (lower is better)
Translates to: SFEFKTHTLTPT*ANSILPNHQTA
Trigger: GGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTGTGGGTTTTAAATTCGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp GCAGGCCTGCCACCCTCTCTAGCAGGAGCCGTAGCCTCAGGCTACTGGCGGCCATGTCATGGCAGGCCCTaGCACTTGGTGCATCCGCCC +
Preference number: 4 (lower is better)
Translates to: AGLPPSLAGAVASGYWRPCHGRP*HLVHPP
Trigger: GGGCGGATGCACCAAGTGTCAGGGCCTGCCATGACA...TGGCCGCCAGTAGCCTGAGGCTACGGCTCCTGCTAGAGAGGGTGGCAGGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp GCAGGCCTGCCACCCTCTCTAGCAGGAGCCGTAGCCTCAGGCTACTGGCGGCCACCAGGGCAGCCTGAATaGGATCCTGCCCCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: AGLPPSLAGAVASGYWRPPGQPE*DPAPSK
Trigger: CTTGCTAGGGGCAGGATCTCATTCAGGCTGCCCTGG...TGGCCGCCAGTAGCCTGAGGCTACGGCTCCTGCTAGAGAGGGTGGCAGGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp TCTGCCTGTGACCTTCGAGGTCATCAAAACGGCCCAGTGGCCTGGGGCAGGGCCGGCATGCTGACCTCCTaGCTGGGGCACCCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SACDLRGHQNGPVAWGRAGMLTS*LGHPLQ
Trigger: CTGAAGCGGGTGCCCCAGGCAGGAGGTCAGCATGCC...GGCCCTGCCCCAGGCCACTGGGCCGTTTTGATGACCTCGAAGGTCACAGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp GGGAGAGGTAGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGCAGCGGCCAGAGCCGTaGATGCTGACCCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: GRGRAMPSPQCLERPWKWQRPEP*MLTRAQ
Trigger: CTGTGCCCGGGTCAGCATGCACGGCTCTGGCCGCTG...CCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCTACCTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTTTGGGCCCTGACACTTGGTaGATCCGCCCGCTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: LGSTAGGASGNGGTSQSLGPDTW*IRPLPQ
Trigger: CTGCGGGAGCGGGCGGATGCACCAAGTGTCAGGGCC...CAAAGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp GGGAGAGGTAGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGCCGGCCCTGAGAAGCTaGCGCTGCCGTCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GRGRAMPSPQCLERPWKWPALRS*RCRLSC
Trigger: GCAGCTGAGACGGCAGCGGCAGCTTCTCAGGGCCGG...CCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCTACCTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349457.8
CDS-3UTR CCA 90 bp GCAGGCCTGCCACCCTCTCTAGCAGGAGCCGTAGCCTCAGGCTACTGGCGGCCAACCTGGACATGGGTATaGCCAGTGCCCACTGAGGGG +
Preference number: 4 (lower is better)
Translates to: AGLPPSLAGAVASGYWRPTWTWV*PVPTEG
Trigger: CCCCTCAGTGGGCACTGGCCATACCCATGTCCAGGT...TGGCCGCCAGTAGCCTGAGGCTACGGCTCCTGCTAGAGAGGGTGGCAGGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR CCA 90 bp GCAGGCCTGCCACCCTCTCTAGCAGGAGCCGTAGCCTCAGGCTACTGGCGGCCAACATCCCTGGCGAGCTaGGCCCAGGTACCAGGACAA +
Preference number: 4 (lower is better)
Translates to: AGLPPSLAGAVASGYWRPTSLAS*AQVPGQ
Trigger: TTGTCCTGGTACCTGGGCCCAGCTCGCCAGGGATGT...TGGCCGCCAGTAGCCTGAGGCTACGGCTCCTGCTAGAGAGGGTGGCAGGCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCAGGCGCCAAGGGCCTCTaGGTGTGGACCAACGGTGCC +
Preference number: 4 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNAGAKGL*VWTNGA
Trigger: GGCACCGTTGGTCCACACTCAGAGGCCCTTGGCGCC...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp GCAGGCCTGCCACCCTCTCTAGCAGGAGCCGTAGCCTCAGGCTACTGGCGGCCAGGAGAGGTAGAGCAATaGCTTCCCCTCAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AGLPPSLAGAVASGYWRPGEVEQ*LPLSAW
Trigger: CCAGGCACTGAGGGGAAGGCATTGCTCTACCTCTCC...TGGCCGCCAGTAGCCTGAGGCTACGGCTCCTGCTAGAGAGGGTGGCAGGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CTGAATGAGATCCTGCCCCTAGCAAGCAGGTGGAGGCCGCGGGAATTCCCACCCCCCAGGCTGGTGCTCTaGCCACATCCCTGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: LNEILPLASRWRPREFPPPRLVL*PHPWRA
Trigger: AGCTCGCCAGGGATGTGGGCAGAGCACCAGCCTGGG...GGGTGGGAATTCCCGCGGCCTCCACCTGCTTGCTAGGGGCAGGATCTCATTCAG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp AGTCTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTCCCAGGCTGGTGCTCTaGCCACATCCCTGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: SLGSTAGGASGNGGTSQSPRLVL*PHPWRA
Trigger: AGCTCGCCAGGGATGTGGGCAGAGCACCAGCCTGGG...AGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp GCAGGCCTGCCACCCTCTCTAGCAGGAGCCGTAGCCTCAGGCTACTGGCGGCCACAGCTATGTCTGGGGTaGAGCCCCCAAGAGCGAAAG +
Preference number: 4 (lower is better)
Translates to: AGLPPSLAGAVASGYWRPQLCLG*SPQERK
Trigger: CTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTG...TGGCCGCCAGTAGCCTGAGGCTACGGCTCCTGCTAGAGAGGGTGGCAGGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCAGCAGGCCCTGACACTTaGTGCATCCGCCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNAAGPDT*CIRPLP
Trigger: CGGGAGCGGGCGGATGCACCAAGTGTCAGGGCCTGC...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CTGAATGAGATCCTGCCCCTAGCAAGCAGGTGGAGGCCGCGGGAATTCCCACCCCCTTGGCGGTCACAGTaGCCTCTGGGGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LNEILPLASRWRPREFPPPWRSQ*PLGSSS
Trigger: GCTGCTGGACCCCAGAGGCCACTGTGACCGCCAAGG...GGGTGGGAATTCCCGCGGCCTCCACCTGCTTGCTAGGGGCAGGATCTCATTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AGTCTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTCGCAGGAGGAGCCTCTaGGAACGGCGGAACCTCCCA +
Preference number: 4 (lower is better)
Translates to: SLGSTAGGASGNGGTSQSRRRSL*ERRNLP
Trigger: TGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCG...AGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp TCTGCCTGTGACCTTCGAGGTCATCAAAACGGCCCAGTGGCCTGGGGCAGGGCCGGTGCCAGCTATGTCTaGGGTGCAGCCCCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: SACDLRGHQNGPVAWGRAGASYV*GAAPKS
Trigger: GCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACC...GGCCCTGCCCCAGGCCACTGGGCCGTTTTGATGACCTCGAAGGTCACAGGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CAA 72 bp TCCCTGGCGAGCTGGGCCCAGGTACCAGGACAAAGTTaGCTGCCCCAGGTAAGGTTGGATCTGCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SLASWAQVPGQS*LPQVRLDLPRS
Trigger: GCTCCGGGGCAGATCCAACCTTACCTGGGGCAGCAAACTTTGTCCTGGTACCTGGGCCCAGCTCGCCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp GGGAGAGGTAGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAACTGGCTCCGGCCCTaGGACATGCTGTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GRGRAMPSPQCLERPWKWNWLRP*DMLSPG
Trigger: TCCTGGGGACAGCATGTCTCAGGGCCGGAGCCAGTT...CCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCTACCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR TCA 90 bp AGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAAAAGGCCCGGCCGCCGTAGCCCATaGCCAGGACACTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: RAMPSPQCLERPWKWKRPGRRSP*PGHCAP
Trigger: TGGTGCACAGTGTCCTGGTCATGGGCTACGGCGGCC...GGGCCTTTTCCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CTGAATGAGATCCTGCCCCTAGCAAGCAGGTGGAGGCCGCGGGAATTCCCACCCAGGTGCCAGCAACTCTaGAGGGACCAGGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LNEILPLASRWRPREFPPRCQQL*RDQGWG
Trigger: TCCCCAGCCCTGGTCCCTGCAGAGTTGCTGGCACCT...GGGTGGGAATTCCCGCGGCCTCCACCTGCTTGCTAGGGGCAGGATCTCATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp GCGAGCTGGGCCCAGGTACCAGGACAAAGTTTGCTGCCCCAGGTAAGGTTGGATGGCCCTGACACTTGGTaGATCCGCCCGCTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: ASWAQVPGQSLLPQVRLDGPDTW*IRPLPQ
Trigger: CTGCGGGAGCGGGCGGATGCACCAAGTGTCAGGGCC...ATCCAACCTTACCTGGGGCAGCAAACTTTGTCCTGGTACCTGGGCCCAGCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp AGTCTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTGGCCCCTCCAGCTGGTaGATGGGGTCTGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: SLGSTAGGASGNGGTSQSGPSSW*MGSANR
Trigger: CCTGTTTGCAGACCCCATGCACCAGCTGGAGGGGCC...AGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp GGGAGAGGTAGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGGGCCCCTCCAGCTGGTaGATGGGGTCTGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: GRGRAMPSPQCLERPWKWGPSSW*MGSANR
Trigger: CCTGTTTGCAGACCCCATGCACCAGCTGGAGGGGCC...CCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCTACCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp TCTGCCTGTGACCTTCGAGGTCATCAAAACGGCCCAGTGGCCTGGGGCAGGGCCGTGCCCACCTGGACATaGGTATGGCCAGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: SACDLRGHQNGPVAWGRAVPTWT*VWPVPT
Trigger: AGTGGGCACTGGCCATACCCATGTCCAGGTGGGCAC...GGCCCTGCCCCAGGCCACTGGGCCGTTTTGATGACCTCGAAGGTCACAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR CCA 90 bp GGGAGAGGTAGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGGCACCCGCTTCAGAGTaGCACTGGTCAGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GRGRAMPSPQCLERPWKWAPASE*HWSARG
Trigger: GCCTCTCGCTGACCAGTGCCACTCTGAAGCGGGTGC...CCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCTACCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp TGCTCTGGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGAAAGTGCACCGGTAGCCTCAGGCTACTaGCGGCCAGAGAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: CSGASYVWGAAPKSESAPVASGY*RPERLR
Trigger: CCTCAGCCTCTCTGGCCGCCAGTAGCCTGAGGCTAC...CGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp TCTGCCTGTGACCTTCGAGGTCATCAAAACGGCCCAGTGGCCTGGGGCAGGGCCTACGGCCCCTCCAGCTaGTGCATGGGGTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: SACDLRGHQNGPVAWGRAYGPSS*CMGSAN
Trigger: GTTTGCAGACCCCATGCACCAGCTGGAGGGGCCGTA...GGCCCTGCCCCAGGCCACTGGGCCGTTTTGATGACCTCGAAGGTCACAGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTTTGGGTGCCAGCTATGTCTaGGGTGCAGCCCCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: LGSTAGGASGNGGTSQSLGASYV*GAAPKS
Trigger: GCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACC...CAAAGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp AGTCTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTTGCCAGGTCCTCTACTaGGCCCCTGACAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: SLGSTAGGASGNGGTSQSCQVLY*APDSHP
Trigger: TGGATGGCTGTCAGGGGCTCAGTAGAGGACCTGGCA...AGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR TCA 90 bp GCAGGCCTGCCACCCTCTCTAGCAGGAGCCGTAGCCTCAGGCTACTGGCGGCCATGTTCACAGGATCCCTaGGGTTGTTCACGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: AGLPPSLAGAVASGYWRPCSQDP*GCSRAH
Trigger: ATGGGCACGTGAACAACCTCAGGGATCCTGTGAACA...TGGCCGCCAGTAGCCTGAGGCTACGGCTCCTGCTAGAGAGGGTGGCAGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCACAGAGCCGTGCATGCTaGCCCGGGCACAGGAGACAT +
Preference number: 4 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNAQSRAC*PGHRRH
Trigger: ATGTCTCCTGTGCCCGGGTCAGCATGCACGGCTCTG...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp ACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCACTGGCTTCATGAGCACTGTCAACTGGCTCCGGCCCTaGGAAGCTGCCGCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: TVPPSVRSGKRTGFMSTVNWLRP*EAAAAV
Trigger: GACGGCAGCGGCAGCTTCTCAGGGCCGGAGCCAGTT...GACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAACGAACACTAGGCGGCACCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349457.8
CDS-3UTR GCA 90 bp GCAGGCCTGCCACCCTCTCTAGCAGGAGCCGTAGCCTCAGGCTACTGGCGGCCAGTGATCCATGCCCTGTaGAGAGTCTCCTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: AGLPPSLAGAVASGYWRPVIHAL*RVSSKN
Trigger: GTTCTTGGAGGAGACTCTGCACAGGGCATGGATCAC...TGGCCGCCAGTAGCCTGAGGCTACGGCTCCTGCTAGAGAGGGTGGCAGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp GCAGGCCTGCCACCCTCTCTAGCAGGAGCCGTAGCCTCAGGCTACTGGCGGCCAGATGTACGTAAGAGGTaGCAGCAACTCTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: AGLPPSLAGAVASGYWRPDVRKR*QQLCRD
Trigger: GTCCCTGCAGAGTTGCTGGCACCTCTTACGTACATC...TGGCCGCCAGTAGCCTGAGGCTACGGCTCCTGCTAGAGAGGGTGGCAGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp GGGAGAGGTAGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGGGGCACAGGAGACATTaGGAATGCGGGGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GRGRAMPSPQCLERPWKWGHRRH*ECGAQQ
Trigger: CTGCTGAGCCCCGCATTCGCAATGTCTCCTGTGCCC...CCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCTACCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CTGAATGAGATCCTGCCCCTAGCAAGCAGGTGGAGGCCGCGGGAATTCCCACCCATGCCTTCCCCTCAGTaGCTGGAGAGGCCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LNEILPLASRWRPREFPPMPSPQ*LERPWK
Trigger: CTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCAT...GGGTGGGAATTCCCGCGGCCTCCACCTGCTTGCTAGGGGCAGGATCTCATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAAAAGGCCCGCACCCGCTTCAGAGTaGCACTGGTCAGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RAMPSPQCLERPWKWKRPAPASE*HWSARG
Trigger: GCCTCTCGCTGACCAGTGCCACTCTGAAGCGGGTGC...GGGCCTTTTCCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp TGCTCTGGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGAAAGTGCACCGTCAGCGAGGCCACGATaGAGATGCTGCAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: CSGASYVWGAAPKSESAPSARPR*RCCSPR
Trigger: TCGTGGGCTGCAGCATCTCCATCGTGGCCTCGCTGA...CGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp GGGAGAGGTAGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGGTGGAAAAGGCCCCTTaGCGGTCACAGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GRGRAMPSPQCLERPWKWVEKAP*RSQWPL
Trigger: CAGAGGCCACTGTGACCGCCAAGGGGCCTTTTCCAC...CCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCTACCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTTTGGAGAGGCCGTGGAAGTaGAAAAGGCCCCTTGGCGGT +
Preference number: 4 (lower is better)
Translates to: LGSTAGGASGNGGTSQSLERPWK*KRPLGG
Trigger: ACCGCCAAGGGGCCTTTTCCACTTCCACGGCCTCTC...CAAAGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AGTCTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTGAGAGGCCGTGGAAGTaGAAAAGGCCCCTTGGCGGT +
Preference number: 4 (lower is better)
Translates to: SLGSTAGGASGNGGTSQSERPWK*KRPLGG
Trigger: ACCGCCAAGGGGCCTTTTCCACTTCCACGGCCTCTC...AGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCATCCCCTGGAGGAAGGTaGCAGGGCCAAGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNASPGGR*QGQAGA
Trigger: AGCACCTGCTTGGCCCTGCCACCTTCCTCCAGGGGA...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCAAGCCAGGATGCCATCTaGCCCTCCCCTGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNASQDAI*PSPGGR
Trigger: CCTTCCTCCAGGGGAGGGCCAGATGGCATCCTGGCT...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CAA 72 bp GGGATGGGCTACTGGTCCAGATGGTCTATGGAAGTCTaGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCG +
Preference number: 4 (lower is better)
Translates to: GMGYWSRWSMEV*GAPQEEPLGTA
Trigger: CGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACTTCCATAGACCATCTGGACCAGTAGCCCATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp AGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAAAAGGCCCCCTCTACTGAGCCCCTaGCAGCCATCCAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: RAMPSPQCLERPWKWKRPPLLSP*QPSKVQ
Trigger: CTGCACCTTGGATGGCTGTCAGGGGCTCAGTAGAGG...GGGCCTTTTCCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR TCA 90 bp TGCTCTGGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGAAAGTGCACCGAGAAGTAGATACAGATaGGCCGCAGCTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CSGASYVWGAAPKSESAPRSRYR*AAAPWG
Trigger: GCCCCAGGGAGCTGCGGCTCATCTGTATCTACTTCT...CGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCAGGAGGAGGTAGAGGTTaGAGCCCTCGATGGCCATCC +
Preference number: 4 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNAGGGRG*SPRWPS
Trigger: GGATGGCCATCGAGGGCTTCAACCTCTACCTCCTCC...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp GCGAGCTGGGCCCAGGTACCAGGACAAAGTTTGCTGCCCCAGGTAAGGTTGGATTGTCATGGCAGGCCCTaGCACTTGGTGCATCCGCCC +
Preference number: 4 (lower is better)
Translates to: ASWAQVPGQSLLPQVRLDCHGRP*HLVHPP
Trigger: GGGCGGATGCACCAAGTGTCAGGGCCTGCCATGACA...ATCCAACCTTACCTGGGGCAGCAAACTTTGTCCTGGTACCTGGGCCCAGCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCAGCTCCTGGGTTAGGCTaGAACAAAGCCGCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNAAPGLG*NKAACP
Trigger: GGGGCAAGCGGCTTTGTTTCAGCCTAACCCAGGAGC...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp AGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAAAAGGCCCCCAGGGCAGCCTGAATaGGATCCTGCCCCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: RAMPSPQCLERPWKWKRPPGQPE*DPAPSK
Trigger: CTTGCTAGGGGCAGGATCTCATTCAGGCTGCCCTGG...GGGCCTTTTCCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp TCTGCCTGTGACCTTCGAGGTCATCAAAACGGCCCAGTGGCCTGGGGCAGGGCCGAGGCACACAGAGGCTaGGTGGTTTGTCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: SACDLRGHQNGPVAWGRAEAHRG*VVCPQS
Trigger: AGACTGTGGACAAACCACTCAGCCTCTGTGTGCCTC...GGCCCTGCCCCAGGCCACTGGGCCGTTTTGATGACCTCGAAGGTCACAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp AGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAAAAGGCCCGGGCACAGGAGACATTaGGAATGCGGGGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: RAMPSPQCLERPWKWKRPGHRRH*ECGAQQ
Trigger: CTGCTGAGCCCCGCATTCGCAATGTCTCCTGTGCCC...GGGCCTTTTCCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp AGTCTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTGGAGAGGTAGAGCAATaGCTTCCCCTCAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SLGSTAGGASGNGGTSQSGEVEQ*LPLSAW
Trigger: CCAGGCACTGAGGGGAAGGCATTGCTCTACCTCTCC...AGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp TCTGCCTGTGACCTTCGAGGTCATCAAAACGGCCCAGTGGCCTGGGGCAGGGCCCCACTGAGGGGCCTGTaGATAAGGACAGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: SACDLRGHQNGPVAWGRAPLRGL*IRTENW
Trigger: CCAGTTCTCTGTCCTTATCCACAGGCCCCTCAGTGG...GGCCCTGCCCCAGGCCACTGGGCCGTTTTGATGACCTCGAAGGTCACAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR CCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTCCTTGGCGGTCACAGTaGCCTCTGGGGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCPWRSQ*PLGSSS
Trigger: GCTGCTGGACCCCAGAGGCCACTGTGACCGCCAAGG...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AGTCTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTGGTCTATGGAAGTCTTaGGAGCACCGCAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SLGSTAGGASGNGGTSQSGLWKS*EHRRRS
Trigger: GCTCCTCCTGCGGTGCTCCCAAGACTTCCATAGACC...AGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp GCGAGCTGGGCCCAGGTACCAGGACAAAGTTTGCTGCCCCAGGTAAGGTTGGATGGAGGAGGTAGAGGTTaGAGCCCTCGATGGCCATCC +
Preference number: 4 (lower is better)
Translates to: ASWAQVPGQSLLPQVRLDGGGRG*SPRWPS
Trigger: GGATGGCCATCGAGGGCTTCAACCTCTACCTCCTCC...ATCCAACCTTACCTGGGGCAGCAAACTTTGTCCTGGTACCTGGGCCCAGCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp TGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTGGGATCCAGCCCCTGGGGCGGGTCTTaGAGGCGTCCCGGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: WANSILPNHQTARTLGSSPWGGS*RRPGSA
Trigger: AGCTGACCCGGGACGCCTGCAAGACCCGCCCCAGGG...GCTGGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTAGGTGCCAGCAACTCTaGAGGGACCAGGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCRCQQL*RDQGWG
Trigger: TCCCCAGCCCTGGTCCCTGCAGAGTTGCTGGCACCT...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AAGCGTGTCTTGCCTTTCCTCCTGGAGGAAATGGGTCACTCAGTAGGCGCAGTCCGCAGGAGGAGCCTCTaGGAACGGCGGAACCTCCCA +
Preference number: 4 (lower is better)
Translates to: KRVLPFLLEEMGHSVGAVRRRSL*ERRNLP
Trigger: TGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCG...GACTGCGCCTACTGAGTGACCCATTTCCTCCAGGAGGAAAGGCAAGACACGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CTGAATGAGATCCTGCCCCTAGCAAGCAGGTGGAGGCCGCGGGAATTCCCACCCGGTCCAGATGGTCTATaGAAGTCTTGGGAGCACCGC +
Preference number: 4 (lower is better)
Translates to: LNEILPLASRWRPREFPPGPDGL*KSWEHR
Trigger: GCGGTGCTCCCAAGACTTCCATAGACCATCTGGACC...GGGTGGGAATTCCCGCGGCCTCCACCTGCTTGCTAGGGGCAGGATCTCATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp GCAGGCCTGCCACCCTCTCTAGCAGGAGCCGTAGCCTCAGGCTACTGGCGGCCAGGGAAAAGAGACAAATaGCCGTGTAAGCGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: AGLPPSLAGAVASGYWRPGKRDK*PCKRVL
Trigger: CAAGACACGCTTACACGGCCATTTGTCTCTTTTCCC...TGGCCGCCAGTAGCCTGAGGCTACGGCTCCTGCTAGAGAGGGTGGCAGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp AGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAAAAGGCCCCAATCCAGGTCACTCTaGAAGGAGCTGCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: RAMPSPQCLERPWKWKRPQSRSL*KELHLL
Trigger: GAGCAGGTGCAGCTCCTTTCAGAGTGACCTGGATTG...GGGCCTTTTCCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR TCA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCAAAAAGGGCACCACAGTaGTCCATGCCCTGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNAKRAPQ*SMPCAE
Trigger: CTCTGCACAGGGCATGGATCACTGTGGTGCCCTTTT...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTATTCCCACCCCACGCTaGCACTCTTCCCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCIPTPR*HSSPWS
Trigger: AGACCAGGGGGAAGAGTGTCAGCGTGGGGTGGGAAT...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp CTGAATGAGATCCTGCCCCTAGCAAGCAGGTGGAGGCCGCGGGAATTCCCACCCATGAGCACTGTCTCATaGAGGTCTGGGGTAAGGGTG +
Preference number: 4 (lower is better)
Translates to: LNEILPLASRWRPREFPPMSTVS*RSGVRV
Trigger: CACCCTTACCCCAGACCTTCATGAGACAGTGCTCAT...GGGTGGGAATTCCCGCGGCCTCCACCTGCTTGCTAGGGGCAGGATCTCATTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp GGGAAAAGAGACAAATGGCCGTGTAAGCGTGTCTTGCCTTTCCTCCTGGAGGAAGGCGCCAAGGGCCTCTaGGTGTGGACCAACGGTGCC +
Preference number: 4 (lower is better)
Translates to: GKRDKWPCKRVLPFLLEEGAKGL*VWTNGA
Trigger: GGCACCGTTGGTCCACACTCAGAGGCCCTTGGCGCC...TTCCTCCAGGAGGAAAGGCAAGACACGCTTACACGGCCATTTGTCTCTTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp TGCTCTGGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGAAAGTGCACCGCACAGATCTCTACATTaGCCCAGATGTGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: CSGASYVWGAAPKSESAPHRSLH*PRCGAA
Trigger: GGCAGCTCCACATCTGGGGCAATGTAGAGATCTGTG...CGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR GCA 90 bp TGCTCTGGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGAAAGTGCACCGGAAAGGAGCTGCACCTaGTCCAGATTGCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: CSGASYVWGAAPKSESAPERSCT*SRLPST
Trigger: TGTGCTTGGCAATCTGGAGCAGGTGCAGCTCCTTTC...CGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR GCA 90 bp CTGAATGAGATCCTGCCCCTAGCAAGCAGGTGGAGGCCGCGGGAATTCCCACCCCACTCTGAAAGGAGCTaGACCTGCTCCAGATTGCCA +
Preference number: 4 (lower is better)
Translates to: LNEILPLASRWRPREFPPHSERS*TCSRLP
Trigger: TGGCAATCTGGAGCAGGTGCAGCTCCTTTCAGAGTG...GGGTGGGAATTCCCGCGGCCTCCACCTGCTTGCTAGGGGCAGGATCTCATTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR GCA 90 bp AGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAAAAGGCCCCACCACAGTGATCCATaGCCTGTGCAGAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: RAMPSPQCLERPWKWKRPHHSDP*PVQSLL
Trigger: GAGGAGACTCTGCACAGGGCATGGATCACTGTGGTG...GGGCCTTTTCCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CCAAGAAAACTGCGGGATGGGCTACTGGTCCAGATGGTCTATGGAAGTCTTGGGGGCATGCTGACCTCCTaGCTGGGGCACCCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: PRKLRDGLLVQMVYGSLGGMLTS*LGHPLQ
Trigger: CTGAAGCGGGTGCCCCAGGCAGGAGGTCAGCATGCC...CCCAAGACTTCCATAGACCATCTGGACCAGTAGCCCATCCCGCAGTTTTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp GCAGGCCTGCCACCCTCTCTAGCAGGAGCCGTAGCCTCAGGCTACTGGCGGCCAGTTAAGGAGTCACTCTaGTTCCTGAAATGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: AGLPPSLAGAVASGYWRPVKESL*FLKWKC
Trigger: GCACTTCCATTTCAGGAAGCAGAGTGACTCCTTAAC...TGGCCGCCAGTAGCCTGAGGCTACGGCTCCTGCTAGAGAGGGTGGCAGGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCGTTTTCCTCTCAGCGGCCAGAGCCGTaGATGCTGACCCGGGCACAG +
Preference number: 4 (lower is better)
Translates to: QDTGIQLIQLEEKEAFSSQRPEP*MLTRAQ
Trigger: CTGTGCCCGGGTCAGCATGCACGGCTCTGGCCGCTG...AGAGGAAAACGCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp GCGAGCTGGGCCCAGGTACCAGGACAAAGTTTGCTGCCCCAGGTAAGGTTGGATCGAAGACGGGGATTGTaGAGGGTCCGTATACCGAGC +
Preference number: 4 (lower is better)
Translates to: ASWAQVPGQSLLPQVRLDRRRGL*RVRIPS
Trigger: GCTCGGTATACGGACCCTGCACAATCCCCGTCTTCG...ATCCAACCTTACCTGGGGCAGCAAACTTTGTCCTGGTACCTGGGCCCAGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTGCAGGGCCAAGCAGGTaGTTCCAGGGCAGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCAGPSR*FQGSLN
Trigger: ATTCAGGCTGCCCTGGAAGCACCTGCTTGGCCCTGC...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCAAGTGTGGACCAACGGTaGCGCCTAGTGTTCGTTCTG +
Preference number: 4 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNASVDQR*RLVFVL
Trigger: CAGAACGAACACTAGGCGGCACCGTTGGTCCACACT...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp TCTGCCTGTGACCTTCGAGGTCATCAAAACGGCCCAGTGGCCTGGGGCAGGGCCGCCTACGCCACTCACTaGCTGGTGAAGGAGTTATTT +
Preference number: 4 (lower is better)
Translates to: SACDLRGHQNGPVAWGRAAYATH*LVKELF
Trigger: AAATAACTCCTTCACCAGGCAGTGAGTGGCGTAGGC...GGCCCTGCCCCAGGCCACTGGGCCGTTTTGATGACCTCGAAGGTCACAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp TCTGCCTGTGACCTTCGAGGTCATCAAAACGGCCCAGTGGCCTGGGGCAGGGCCCTCTGCTTCCTGAAATaGAAGTGCAGCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: SACDLRGHQNGPVAWGRALCFLK*KCSRTV
Trigger: CACAGTCCTGCTGCACTTCCATTTCAGGAAGCAGAG...GGCCCTGCCCCAGGCCACTGGGCCGTTTTGATGACCTCGAAGGTCACAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AGACAGACTCAAAGACAGTCCTTGAAACTTGGCTTCCTGATGCCCAGGCTGGTGGCAGGCCCTGACACTTaGTGCATCCGCCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: RQTQRQSLKLGFLMPRLVAGPDT*CIRPLP
Trigger: CGGGAGCGGGCGGATGCACCAAGTGTCAGGGCCTGC...CACCAGCCTGGGCATCAGGAAGCCAAGTTTCAAGGACTGTCTTTGAGTCTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTGTGGAAAAGGCCCCTTaGCGGTCACAGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCVEKAP*RSQWPL
Trigger: CAGAGGCCACTGTGACCGCCAAGGGGCCTTTTCCAC...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp GCGAGCTGGGCCCAGGTACCAGGACAAAGTTTGCTGCCCCAGGTAAGGTTGGATTGCCTGGAGAGGCCGTaGAAGTGGAAAAGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: ASWAQVPGQSLLPQVRLDCLERP*KWKRPL
Trigger: AAGGGGCCTTTTCCACTTCCACGGCCTCTCCAGGCA...ATCCAACCTTACCTGGGGCAGCAAACTTTGTCCTGGTACCTGGGCCCAGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AAGCGTGTCTTGCCTTTCCTCCTGGAGGAAATGGGTCACTCAGTAGGCGCAGTCCCCCTAGCAAGCAGGTaGAGGCCGCGGGAATTCCCA +
Preference number: 4 (lower is better)
Translates to: KRVLPFLLEEMGHSVGAVPLASR*RPREFP
Trigger: TGGGAATTCCCGCGGCCTCCACCTGCTTGCTAGGGG...GACTGCGCCTACTGAGTGACCCATTTCCTCCAGGAGGAAAGGCAAGACACGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CTGAATGAGATCCTGCCCCTAGCAAGCAGGTGGAGGCCGCGGGAATTCCCACCCGAACCTCCCAATCTTTaGGAAGGGTGGGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: LNEILPLASRWRPREFPPEPPNL*EGWAWT
Trigger: AGTCCAAGCCCACCCTTCCCAAAGATTGGGAGGTTC...GGGTGGGAATTCCCGCGGCCTCCACCTGCTTGCTAGGGGCAGGATCTCATTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp GCGAGCTGGGCCCAGGTACCAGGACAAAGTTTGCTGCCCCAGGTAAGGTTGGATGGTCTATGGAAGTCTTaGGAGCACCGCAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ASWAQVPGQSLLPQVRLDGLWKS*EHRRRS
Trigger: GCTCCTCCTGCGGTGCTCCCAAGACTTCCATAGACC...ATCCAACCTTACCTGGGGCAGCAAACTTTGTCCTGGTACCTGGGCCCAGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTTTGTGCGGGATGGGCTACTaGTCCAGATGGTCTATGGAA +
Preference number: 4 (lower is better)
Translates to: LGSTAGGASGNGGTSQSLCGMGY*SRWSME
Trigger: TTCCATAGACCATCTGGACCAGTAGCCCATCCCGCA...CAAAGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp ACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCACTGGCTTCATGAGCACTGTCTACGGCCCCTCCAGCTaGTGCATGGGGTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: TVPPSVRSGKRTGFMSTVYGPSS*CMGSAN
Trigger: GTTTGCAGACCCCATGCACCAGCTGGAGGGGCCGTA...GACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAACGAACACTAGGCGGCACCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp ACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCACTGGCTTCATGAGCACTGTCAGAAGTAGATACAGATaGGCCGCAGCTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TVPPSVRSGKRTGFMSTVRSRYR*AAAPWG
Trigger: GCCCCAGGGAGCTGCGGCTCATCTGTATCTACTTCT...GACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAACGAACACTAGGCGGCACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp CCAAGAAAACTGCGGGATGGGCTACTGGTCCAGATGGTCTATGGAAGTCTTGGGTTGTTCACGTGCCCATaGCTCAGCTGGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PRKLRDGLLVQMVYGSLGLFTCP*LSWAPR
Trigger: CCTGGGGGCCCAGCTGAGTCATGGGCACGTGAACAA...CCCAAGACTTCCATAGACCATCTGGACCAGTAGCCCATCCCGCAGTTTTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp TGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTGGGATCCAGCGGCCGCCGTAGCCCATaGCCAGGACACTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: WANSILPNHQTARTLGSSGRRSP*PGHCAP
Trigger: TGGTGCACAGTGTCCTGGTCATGGGCTACGGCGGCC...GCTGGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCAACACTGGGATCCAGCTaGTTCAGCTGGAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNATLGSS*FSWRRK
Trigger: CTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGT...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp GCGAGCTGGGCCCAGGTACCAGGACAAAGTTTGCTGCCCCAGGTAAGGTTGGATGAGGCACACAGAGGCTaGGTGGTTTGTCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: ASWAQVPGQSLLPQVRLDEAHRG*VVCPQS
Trigger: AGACTGTGGACAAACCACTCAGCCTCTGTGTGCCTC...ATCCAACCTTACCTGGGGCAGCAAACTTTGTCCTGGTACCTGGGCCCAGCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTGGTGGGTCCCCAGCTTaGTCACCAGGATATCACCAG +
Preference number: 4 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCGGSPA*SPGYHQ
Trigger: CTGGTGATATCCTGGTGAGCAAGCTGGGGACCCACC...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR GCA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCAGTGATCCATGCCCTGTaGAGAGTCTCCTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNAVIHAL*RVSSKN
Trigger: GTTCTTGGAGGAGACTCTGCACAGGGCATGGATCAC...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp ATGCAATTTTTACTAAGCTCCTGGGTTAGGCTGAAACAAAGCCGCTTGCCCCCACCCTGGGGCGGGTCTTaGAGGCGTCCCGGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: MQFLLSSWVRLKQSRLPPPWGGS*RRPGSA
Trigger: AGCTGACCCGGGACGCCTGCAAGACCCGCCCCAGGG...TGGGGGCAAGCGGCTTTGTTTCAGCCTAACCCAGGAGCTTAGTAAAAATTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp ACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCACTGGCTTCATGAGCACTGTCCCACGATGGAGATGCTaGAGCCCACGAGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: TVPPSVRSGKRTGFMSTVPRWRC*SPRGRC
Trigger: ACATCTCCCTCGTGGGCTGCAGCATCTCCATCGTGG...GACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAACGAACACTAGGCGGCACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTCGAAGACGGGGATTGTaGAGGGTCCGTATACCGAGC +
Preference number: 4 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCRRRGL*RVRIPS
Trigger: GCTCGGTATACGGACCCTGCACAATCCCCGTCTTCG...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCATTGAGCGATTCTAGATaGAGTCTTGGCGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNALSDSR*SLGAKG
Trigger: GCCCTTGGCGCCAAGACTGCATCTAGAATCGCTCAA...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp AGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAAAAGGCCCCTGGTGCATGGGGTCTaGAAACAGGTGTTTGAGCGA +
Preference number: 4 (lower is better)
Translates to: RAMPSPQCLERPWKWKRPLVHGV*KQVFER
Trigger: TCGCTCAAACACCTGTTTGCAGACCCCATGCACCAG...GGGCCTTTTCCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp AGTCTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTCGTGTAAGCGTGTCTTaGCTTTCCTCCTGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SLGSTAGGASGNGGTSQSRVSVS*LSSWRK
Trigger: TTTCCTCCAGGAGGAAAGGCAAGACACGCTTACACG...AGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp GCGAGCTGGGCCCAGGTACCAGGACAAAGTTTGCTGCCCCAGGTAAGGTTGGATCCCCAAGAGCGAAAGTaGACCGCCGCATTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: ASWAQVPGQSLLPQVRLDPQERK*TAALGK
Trigger: TTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGG...ATCCAACCTTACCTGGGGCAGCAAACTTTGTCCTGGTACCTGGGCCCAGCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp ACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCACTGGCTTCATGAGCACTGTCCCCAGGGCTGTTTCCTaGCTCCCTCCTTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: TVPPSVRSGKRTGFMSTVPRAVS*LPPSRR
Trigger: TCTTCTGGAAGGAGGGAGCCAGGAAACAGCCCTGGG...GACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAACGAACACTAGGCGGCACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCATCCGCACCCAGCATATaGACATGTTCTGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNASAPSI*TCSGSL
Trigger: CAGGCTTCCAGAACATGTCCATATGCTGGGTGCGGA...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CCAAGAAAACTGCGGGATGGGCTACTGGTCCAGATGGTCTATGGAAGTCTTGGGCCCCTAGCAAGCAGGTaGAGGCCGCGGGAATTCCCA +
Preference number: 4 (lower is better)
Translates to: PRKLRDGLLVQMVYGSLGPLASR*RPREFP
Trigger: TGGGAATTCCCGCGGCCTCCACCTGCTTGCTAGGGG...CCCAAGACTTCCATAGACCATCTGGACCAGTAGCCCATCCCGCAGTTTTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp TTCTGGGAAACGCACTGGCTTCATGAGCACTGTCTCATGAAGGTCTGGGGTAAGCATCTGGCCCTCCCCTaGAGGAAGGTGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: FWETHWLHEHCLMKVWGKHLALP*RKVAGP
Trigger: TGGCCCTGCCACCTTCCTCCAGGGGAGGGCCAGATG...CTTACCCCAGACCTTCATGAGACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCGTTTTCCTCTCATCTGGCCCTCCCCTaGAGGAAGGTGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QDTGIQLIQLEEKEAFSSHLALP*RKVAGP
Trigger: TGGCCCTGCCACCTTCCTCCAGGGGAGGGCCAGATG...AGAGGAAAACGCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CTGAATGAGATCCTGCCCCTAGCAAGCAGGTGGAGGCCGCGGGAATTCCCACCCAAGAAAACTGCGGGATaGGCTACTGGTCCAGATGGT +
Preference number: 4 (lower is better)
Translates to: LNEILPLASRWRPREFPPKKTAG*ATGPDG
Trigger: ACCATCTGGACCAGTAGCCCATCCCGCAGTTTTCTT...GGGTGGGAATTCCCGCGGCCTCCACCTGCTTGCTAGGGGCAGGATCTCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTTTGACTCTCACGCCTACCTaGGCAAATTCAATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LGSTAGGASGNGGTSQSLTLTPT*ANSILP
Trigger: GGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGT...CAAAGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AGTCTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTTCTTGCCTTTCCTCCTaGAGGAAATGGGTCACTCAG +
Preference number: 4 (lower is better)
Translates to: SLGSTAGGASGNGGTSQSSCLSS*RKWVTQ
Trigger: CTGAGTGACCCATTTCCTCCAGGAGGAAAGGCAAGA...AGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAAAAGGCCCAGTGCACCGCCGCATTaGGAAAAGAGACAAATGGCC +
Preference number: 4 (lower is better)
Translates to: RAMPSPQCLERPWKWKRPSAPPH*EKRQMA
Trigger: GGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACT...GGGCCTTTTCCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CAA 72 bp GGGTGCAGCCCCCAAGAGCGAAAGTGCACCGCCGCATaGGGAAAAGAGACAAATGGCCGTGTAAGCGTGTCT +
Preference number: 4 (lower is better)
Translates to: GCSPQERKCTAA*GKETNGRVSVS
Trigger: AGACACGCTTACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGGCTGCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp GGGAAAAGAGACAAATGGCCGTGTAAGCGTGTCTTGCCTTTCCTCCTGGAGGAATTGTTCACGTGCCCATaGCTCAGCTGGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GKRDKWPCKRVLPFLLEELFTCP*LSWAPR
Trigger: CCTGGGGGCCCAGCTGAGTCATGGGCACGTGAACAA...TTCCTCCAGGAGGAAAGGCAAGACACGCTTACACGGCCATTTGTCTCTTTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp CAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCGTTTTCCTCTCAGAGCCGTGCATGCTaGCCCGGGCACAGGAGACAT +
Preference number: 4 (lower is better)
Translates to: QDTGIQLIQLEEKEAFSSQSRAC*PGHRRH
Trigger: ATGTCTCCTGTGCCCGGGTCAGCATGCACGGCTCTG...AGAGGAAAACGCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp GGGAGAGGTAGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGCTAGCACACCAAGCTTaGACACATATCTGCGGATGT +
Preference number: 4 (lower is better)
Translates to: GRGRAMPSPQCLERPWKWLAHQA*THICGC
Trigger: ACATCCGCAGATATGTGTTCAAGCTTGGTGTGCTAG...CCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCTACCTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp CTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTTTGCTGCAAACAGGTGTTTaGGCGATTCTAGATGCAGTC +
Preference number: 4 (lower is better)
Translates to: LGSTAGGASGNGGTSQSLLQTGV*AILDAV
Trigger: GACTGCATCTAGAATCGCTCAAACACCTGTTTGCAG...CAAAGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp ACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCACTGGCTTCATGAGCACTGTCCACCACAGTGATCCATaGCCTGTGCAGAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TVPPSVRSGKRTGFMSTVHHSDP*PVQSLL
Trigger: GAGGAGACTCTGCACAGGGCATGGATCACTGTGGTG...GACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAACGAACACTAGGCGGCACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CTGAATGAGATCCTGCCCCTAGCAAGCAGGTGGAGGCCGCGGGAATTCCCACCCTCCAGGCTTTGGTTGTaGCAGAAGCTGATGTTCACA +
Preference number: 4 (lower is better)
Translates to: LNEILPLASRWRPREFPPSRLWL*QKLMFT
Trigger: TGTGAACATCAGCTTCTGGCACAACCAAAGCCTGGA...GGGTGGGAATTCCCGCGGCCTCCACCTGCTTGCTAGGGGCAGGATCTCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp AAGCGTGTCTTGCCTTTCCTCCTGGAGGAAATGGGTCACTCAGTAGGCGCAGTCCCACGATGGAGATGCTaGAGCCCACGAGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: KRVLPFLLEEMGHSVGAVPRWRC*SPRGRC
Trigger: ACATCTCCCTCGTGGGCTGCAGCATCTCCATCGTGG...GACTGCGCCTACTGAGTGACCCATTTCCTCCAGGAGGAAAGGCAAGACACGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGATGACCAGGACACTGTaGACCACGGGGCTCCGCACC +
Preference number: 4 (lower is better)
Translates to: HSHAYLGKFNLAQSPNSQMTRTL*TTGLRT
Trigger: GGTGCGGAGCCCCGTGGTGCACAGTGTCCTGGTCAT...CTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCACGTGTAAGCGTGTCTTaGCTTTCCTCCTGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNARVSVS*LSSWRK
Trigger: TTTCCTCCAGGAGGAAAGGCAAGACACGCTTACACG...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTCCCCAAGAGCGAAAGTaGACCGCCGCATTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCPQERK*TAALGK
Trigger: TTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGG...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CCAAGAAAACTGCGGGATGGGCTACTGGTCCAGATGGTCTATGGAAGTCTTGGGAGCACCCTGCTCTGGTaGCAGCTATGTCTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PRKLRDGLLVQMVYGSLGSTLLW*QLCLGC
Trigger: GCACCCCAGACATAGCTGGCACCAGAGCAGGGTGCT...CCCAAGACTTCCATAGACCATCTGGACCAGTAGCCCATCCCGCAGTTTTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp GCGAGCTGGGCCCAGGTACCAGGACAAAGTTTGCTGCCCCAGGTAAGGTTGGATTCCGCACCCAGCATATaGACATGTTCTGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: ASWAQVPGQSLLPQVRLDSAPSI*TCSGSL
Trigger: CAGGCTTCCAGAACATGTCCATATGCTGGGTGCGGA...ATCCAACCTTACCTGGGGCAGCAAACTTTGTCCTGGTACCTGGGCCCAGCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AGACAGACTCAAAGACAGTCCTTGAAACTTGGCTTCCTGATGCCCAGGCTGGTGGTAGCCTCAGGCTACTaGCGGCCAGAGAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RQTQRQSLKLGFLMPRLVVASGY*RPERLR
Trigger: CCTCAGCCTCTCTGGCCGCCAGTAGCCTGAGGCTAC...CACCAGCCTGGGCATCAGGAAGCCAAGTTTCAAGGACTGTCTTTGAGTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp ACCAAACAGCCAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCACATCCCTGGCGAGCTaGGCCCAGGTACCAGGACAA +
Preference number: 4 (lower is better)
Translates to: TKQPGHWDPADSAGGERSTSLAS*AQVPGQ
Trigger: TTGTCCTGGTACCTGGGCCCAGCTCGCCAGGGATGT...GCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CCCACACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGTCCCCTGGAGGAAGGTaGCAGGGCCAAGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: PTLSRLPGQIQSCPITKQSPGGR*QGQAGA
Trigger: AGCACCTGCTTGGCCCTGCCACCTTCCTCCAGGGGA...CTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AGTCTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTAATCTTTGGGAAGGGTaGGCTTGGACTTGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: SLGSTAGGASGNGGTSQSNLWEG*AWTWSH
Trigger: ATGACTCCAAGTCCAAGCCCACCCTTCCCAAAGATT...AGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTGGTCCAGATGGTCTATaGAAGTCTTGGGAGCACCGC +
Preference number: 4 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCGPDGL*KSWEHR
Trigger: GCGGTGCTCCCAAGACTTCCATAGACCATCTGGACC...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAAAAGGCCCGGCTACTGGTCCAGATaGTCTATGGAAGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RAMPSPQCLERPWKWKRPGYWSR*SMEVLG
Trigger: TCCCAAGACTTCCATAGACCATCTGGACCAGTAGCC...GGGCCTTTTCCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAAAAGGCCCAAACAGCCAGGACACTaGGATCCAGCTGATTCAGCT +
Preference number: 4 (lower is better)
Translates to: RAMPSPQCLERPWKWKRPKQPGH*DPADSA
Trigger: AGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTT...GGGCCTTTTCCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCATTCTGGGAAACGCACTaGCTTCATGAGCACTGTCTC +
Preference number: 4 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNAFWETH*LHEHCL
Trigger: GAGACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAA...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAAAAGGCCCTTCTGGGAAACGCACTaGCTTCATGAGCACTGTCTC +
Preference number: 4 (lower is better)
Translates to: RAMPSPQCLERPWKWKRPFWETH*LHEHCL
Trigger: GAGACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAA...GGGCCTTTTCCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp ACCAAACAGCCAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCCTGAGCACCCTGCTCTaGTGCCAGCTATGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: TKQPGHWDPADSAGGERSLSTLL*CQLCLG
Trigger: CCCCAGACATAGCTGGCACCAGAGCAGGGTGCTCAG...GCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp CACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGATTCCCACCCCACGCTaGCACTCTTCCCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: HSHAYLGKFNLAQSPNSQIPTPR*HSSPWS
Trigger: AGACCAGGGGGAAGAGTGTCAGCGTGGGGTGGGAAT...CTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp AGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAAAAGGCCCGTAAGGGTGATTCTCTaGAACTATGGCCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RAMPSPQCLERPWKWKRPVRVIL*NYGLSF
Trigger: GAAGCTCAGGCCATAGTTTCAGAGAATCACCCTTAC...GGGCCTTTTCCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp GGGAGAGGTAGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGCCTATTTTCTGCCTGTaGCCTTCGAGGTCATCAAAA +
Preference number: 4 (lower is better)
Translates to: GRGRAMPSPQCLERPWKWPIFCL*PSRSSK
Trigger: TTTTGATGACCTCGAAGGTCACAGGCAGAAAATAGG...CCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCTACCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp GCAGGCCTGCCACCCTCTCTAGCAGGAGCCGTAGCCTCAGGCTACTGGCGGCCACTTCTTAATTTAAATTaGCCCTCCTTCCAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: AGLPPSLAGAVASGYWRPLLNLN*PSFQKH
Trigger: GTGCTTTTGGAAGGAGGGGCAATTTAAATTAAGAAG...TGGCCGCCAGTAGCCTGAGGCTACGGCTCCTGCTAGAGAGGGTGGCAGGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR GCA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCATTCCTGAAATGGAAGTaGAGCAGGACTGTGATCAGC +
Preference number: 4 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNAFLKWK*SRTVIS
Trigger: GCTGATCACAGTCCTGCTGCACTTCCATTTCAGGAA...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGATGCCTTCCCCTCAGTaGCTGGAGAGGCCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: HSHAYLGKFNLAQSPNSQMPSPQ*LERPWK
Trigger: CTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCAT...CTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTCTGGTGCATGGGGTCTaGAAACAGGTGTTTGAGCGA +
Preference number: 4 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCLVHGV*KQVFER
Trigger: TCGCTCAAACACCTGTTTGCAGACCCCATGCACCAG...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp TTCTGGGAAACGCACTGGCTTCATGAGCACTGTCTCATGAAGGTCTGGGGTAAGAGCACCCTGCTCTGGTaGCAGCTATGTCTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: FWETHWLHEHCLMKVWGKSTLLW*QLCLGC
Trigger: GCACCCCAGACATAGCTGGCACCAGAGCAGGGTGCT...CTTACCCCAGACCTTCATGAGACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp TTCTGGGAAACGCACTGGCTTCATGAGCACTGTCTCATGAAGGTCTGGGGTAAGTCAGCGAGGCCACGATaGAGATGCTGCAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: FWETHWLHEHCLMKVWGKSARPR*RCCSPR
Trigger: TCGTGGGCTGCAGCATCTCCATCGTGGCCTCGCTGA...CTTACCCCAGACCTTCATGAGACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp ACCAAACAGCCAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCGTGAAGAGGAACAGCTaGGGCAGCAGGAAGACGCCA +
Preference number: 4 (lower is better)
Translates to: TKQPGHWDPADSAGGERSVKRNS*GSRKTP
Trigger: TGGCGTCTTCCTGCTGCCCCAGCTGTTCCTCTTCAC...GCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp GCGAGCTGGGCCCAGGTACCAGGACAAAGTTTGCTGCCCCAGGTAAGGTTGGATACTCTCACGCCTACCTaGGCAAATTCAATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: ASWAQVPGQSLLPQVRLDTLTPT*ANSILP
Trigger: GGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGT...ATCCAACCTTACCTGGGGCAGCAAACTTTGTCCTGGTACCTGGGCCCAGCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCAGGGAAAAGAGACAAATaGCCGTGTAAGCGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNAGKRDK*PCKRVL
Trigger: CAAGACACGCTTACACGGCCATTTGTCTCTTTTCCC...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp GGGAAAAGAGACAAATGGCCGTGTAAGCGTGTCTTGCCTTTCCTCCTGGAGGAACTGAGCACCCTGCTCTaGTGCCAGCTATGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GKRDKWPCKRVLPFLLEELSTLL*CQLCLG
Trigger: CCCCAGACATAGCTGGCACCAGAGCAGGGTGCTCAG...TTCCTCCAGGAGGAAAGGCAAGACACGCTTACACGGCCATTTGTCTCTTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp CCAAGAAAACTGCGGGATGGGCTACTGGTCCAGATGGTCTATGGAAGTCTTGGGAGTCACAGCTCAGCTTaGAGGCCAGAGACTGGATGG +
Preference number: 4 (lower is better)
Translates to: PRKLRDGLLVQMVYGSLGSHSSA*RPETGW
Trigger: CCATCCAGTCTCTGGCCTTCAAGCTGAGCTGTGACT...CCCAAGACTTCCATAGACCATCTGGACCAGTAGCCCATCCCGCAGTTTTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp AAGCGTGTCTTGCCTTTCCTCCTGGAGGAAATGGGTCACTCAGTAGGCGCAGTCTGTTCACAGGATCCCTaGGGTTGTTCACGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: KRVLPFLLEEMGHSVGAVCSQDP*GCSRAH
Trigger: ATGGGCACGTGAACAACCTCAGGGATCCTGTGAACA...GACTGCGCCTACTGAGTGACCCATTTCCTCCAGGAGGAAAGGCAAGACACGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp TTCTGGGAAACGCACTGGCTTCATGAGCACTGTCTCATGAAGGTCTGGGGTAAGTCCGGCCCTGAGACATaGTGTCCCCAGGATCCAATC +
Preference number: 4 (lower is better)
Translates to: FWETHWLHEHCLMKVWGKSGPET*CPQDPI
Trigger: GATTGGATCCTGGGGACAGCATGTCTCAGGGCCGGA...CTTACCCCAGACCTTCATGAGACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR GCA 90 bp ACCAAACAGCCAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCAGCAGCACGGAGGCATaGAGGTTCATGTGGATGCGT +
Preference number: 4 (lower is better)
Translates to: TKQPGHWDPADSAGGERSSSTEA*RFMWMR
Trigger: ACGCATCCACATGAACCTGCATGCCTCCGTGCTGCT...GCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp TGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTGGGATCCAGCAGGAGACATTGCGAATaGGGGGCTCAGCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: WANSILPNHQTARTLGSSRRHCE*GAQQEG
Trigger: GCCTTCCTGCTGAGCCCCGCATTCGCAATGTCTCCT...GCTGGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGAGGAGACATTGCGAATaGGGGGCTCAGCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: HSHAYLGKFNLAQSPNSQRRHCE*GAQQEG
Trigger: GCCTTCCTGCTGAGCCCCGCATTCGCAATGTCTCCT...CTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp ATGCAATTTTTACTAAGCTCCTGGGTTAGGCTGAAACAAAGCCGCTTGCCCCCAATGACCAGGACACTGTaGACCACGGGGCTCCGCACC +
Preference number: 4 (lower is better)
Translates to: MQFLLSSWVRLKQSRLPPMTRTL*TTGLRT
Trigger: GGTGCGGAGCCCCGTGGTGCACAGTGTCCTGGTCAT...TGGGGGCAAGCGGCTTTGTTTCAGCCTAACCCAGGAGCTTAGTAAAAATTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CCCACACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGCAGCTATGTCTGGGGTaGAGCCCCCAAGAGCGAAAG +
Preference number: 4 (lower is better)
Translates to: PTLSRLPGQIQSCPITKQQLCLG*SPQERK
Trigger: CTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTG...CTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp ACCAAACAGCCAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCAGGCCAGAGACTGGATaGTGGGTGTCTGCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: TKQPGHWDPADSAGGERSRPETG*WVSARS
Trigger: TGACCTTGCAGACACCCACCATCCAGTCTCTGGCCT...GCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AGACAGACTCAAAGACAGTCCTTGAAACTTGGCTTCCTGATGCCCAGGCTGGTGGCTTCAGAGTGGCACTaGTCAGCGAGAGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RQTQRQSLKLGFLMPRLVASEWH*SARGQR
Trigger: TCTCTGGCCTCTCGCTGACCAGTGCCACTCTGAAGC...CACCAGCCTGGGCATCAGGAAGCCAAGTTTCAAGGACTGTCTTTGAGTCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp TGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTGGGATCCAGCCCCAGGGCTGTTTCCTaGCTCCCTCCTTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: WANSILPNHQTARTLGSSPRAVS*LPPSRR
Trigger: TCTTCTGGAAGGAGGGAGCCAGGAAACAGCCCTGGG...GCTGGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp GGGAAAAGAGACAAATGGCCGTGTAAGCGTGTCTTGCCTTTCCTCCTGGAGGAAGTGAAGAGGAACAGCTaGGGCAGCAGGAAGACGCCA +
Preference number: 4 (lower is better)
Translates to: GKRDKWPCKRVLPFLLEEVKRNS*GSRKTP
Trigger: TGGCGTCTTCCTGCTGCCCCAGCTGTTCCTCTTCAC...TTCCTCCAGGAGGAAAGGCAAGACACGCTTACACGGCCATTTGTCTCTTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CCCACACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGTCTGAGCGGCACCGCTaGGAGCAGAACCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: PTLSRLPGQIQSCPITKQSERHR*EQNHRK
Trigger: TTTCCTGTGGTTCTGCTCCCAGCGGTGCCGCTCAGA...CTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp TGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTGGGATCCAGCTCTGAGCGGCACCGCTaGGAGCAGAACCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: WANSILPNHQTARTLGSSSERHR*EQNHRK
Trigger: TTTCCTGTGGTTCTGCTCCCAGCGGTGCCGCTCAGA...GCTGGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AGACAGACTCAAAGACAGTCCTTGAAACTTGGCTTCCTGATGCCCAGGCTGGTGTGCCTGGAGAGGCCGTaGAAGTGGAAAAGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: RQTQRQSLKLGFLMPRLVCLERP*KWKRPL
Trigger: AAGGGGCCTTTTCCACTTCCACGGCCTCTCCAGGCA...CACCAGCCTGGGCATCAGGAAGCCAAGTTTCAAGGACTGTCTTTGAGTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AAGCGTGTCTTGCCTTTCCTCCTGGAGGAAATGGGTCACTCAGTAGGCGCAGTCTGCGGGATGGGCTACTaGTCCAGATGGTCTATGGAA +
Preference number: 4 (lower is better)
Translates to: KRVLPFLLEEMGHSVGAVCGMGY*SRWSME
Trigger: TTCCATAGACCATCTGGACCAGTAGCCCATCCCGCA...GACTGCGCCTACTGAGTGACCCATTTCCTCCAGGAGGAAAGGCAAGACACGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CAA 72 bp GGCCCAAGGTCATACAGACAGACTCAAAGACAGTCCTaGAAACTTGGCTTCCTGATGCCCAGGCTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: GPRSYRQTQRQS*KLGFLMPRLVL
Trigger: GAGCACCAGCCTGGGCATCAGGAAGCCAAGTTTCAAGGACTGTCTTTGAGTCTGTCTGTATGACCTTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CAA 72 bp ACCCACACTCTCACGCCTACCTGGGCAAATTCAATCTaGCCCAATCACCAAACAGCCAGGACACTGGGATCC +
Preference number: 4 (lower is better)
Translates to: THTLTPTWANSI*PNHQTARTLGS
Trigger: GGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp TGCTCTGGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGAAAGTGCACCGTTACAGATGAGAAACTaGGGTCCAGAAAAGAAACCT +
Preference number: 4 (lower is better)
Translates to: CSGASYVWGAAPKSESAPLQMRN*GPEKKP
Trigger: AGGTTTCTTTTCTGGACCTCAGTTTCTCATCTGTAA...CGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR TCA 90 bp CAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCGTTTTCCTCTAAAAGGGCACCACAGTaGTCCATGCCCTGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QDTGIQLIQLEEKEAFSSKRAPQ*SMPCAE
Trigger: CTCTGCACAGGGCATGGATCACTGTGGTGCCCTTTT...AGAGGAAAACGCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp AGACAGACTCAAAGACAGTCCTTGAAACTTGGCTTCCTGATGCCCAGGCTGGTGAGTCACAGCTCAGCTTaGAGGCCAGAGACTGGATGG +
Preference number: 4 (lower is better)
Translates to: RQTQRQSLKLGFLMPRLVSHSSA*RPETGW
Trigger: CCATCCAGTCTCTGGCCTTCAAGCTGAGCTGTGACT...CACCAGCCTGGGCATCAGGAAGCCAAGTTTCAAGGACTGTCTTTGAGTCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp ACCAAACAGCCAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCACACTGGGATCCAGCTaGTTCAGCTGGAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: TKQPGHWDPADSAGGERSTLGSS*FSWRRK
Trigger: CTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGT...GCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTCTGCAAACAGGTGTTTaGGCGATTCTAGATGCAGTC +
Preference number: 4 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCLQTGV*AILDAV
Trigger: GACTGCATCTAGAATCGCTCAAACACCTGTTTGCAG...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp ATGCAATTTTTACTAAGCTCCTGGGTTAGGCTGAAACAAAGCCGCTTGCCCCCAGCAGGGCCAAGCAGGTaGTTCCAGGGCAGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: MQFLLSSWVRLKQSRLPPAGPSR*FQGSLN
Trigger: ATTCAGGCTGCCCTGGAAGCACCTGCTTGGCCCTGC...TGGGGGCAAGCGGCTTTGTTTCAGCCTAACCCAGGAGCTTAGTAAAAATTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp GGGAAAAGAGACAAATGGCCGTGTAAGCGTGTCTTGCCTTTCCTCCTGGAGGAAAGTGTGGACCAACGGTaGCGCCTAGTGTTCGTTCTG +
Preference number: 4 (lower is better)
Translates to: GKRDKWPCKRVLPFLLEESVDQR*RLVFVL
Trigger: CAGAACGAACACTAGGCGGCACCGTTGGTCCACACT...TTCCTCCAGGAGGAAAGGCAAGACACGCTTACACGGCCATTTGTCTCTTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CCAAGAAAACTGCGGGATGGGCTACTGGTCCAGATGGTCTATGGAAGTCTTGGGACATTGCCCCAGATGTaGAGCTGCCAACCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PRKLRDGLLVQMVYGSLGTLPQM*SCQPER
Trigger: CCTTTCTGGTTGGCAGCTCCACATCTGGGGCAATGT...CCCAAGACTTCCATAGACCATCTGGACCAGTAGCCCATCCCGCAGTTTTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR CCA 90 bp AGACAGACTCAAAGACAGTCCTTGAAACTTGGCTTCCTGATGCCCAGGCTGGTGCCAGAGACTGGATGGTaGGTGTCTGCAAGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RQTQRQSLKLGFLMPRLVPETGW*VSARSG
Trigger: ACCTGACCTTGCAGACACCCACCATCCAGTCTCTGG...CACCAGCCTGGGCATCAGGAAGCCAAGTTTCAAGGACTGTCTTTGAGTCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AAGCGTGTCTTGCCTTTCCTCCTGGAGGAAATGGGTCACTCAGTAGGCGCAGTCCTCTGCTTCCTGAAATaGAAGTGCAGCAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: KRVLPFLLEEMGHSVGAVLCFLK*KCSRTV
Trigger: CACAGTCCTGCTGCACTTCCATTTCAGGAAGCAGAG...GACTGCGCCTACTGAGTGACCCATTTCCTCCAGGAGGAAAGGCAAGACACGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AGTCTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTTTTTTACTAAGCTCCTaGGTTAGGCTGAAACAAAGC +
Preference number: 4 (lower is better)
Translates to: SLGSTAGGASGNGGTSQSFLLSS*VRLKQS
Trigger: GCTTTGTTTCAGCCTAACCCAGGAGCTTAGTAAAAA...AGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTTTGTTTTTACTAAGCTCCTaGGTTAGGCTGAAACAAAGC +
Preference number: 4 (lower is better)
Translates to: LGSTAGGASGNGGTSQSLFLLSS*VRLKQS
Trigger: GCTTTGTTTCAGCCTAACCCAGGAGCTTAGTAAAAA...CAAAGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTGGGTGGGCTTGGACTTaGAGTCATCATAATTTAGGG +
Preference number: 4 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCGWAWT*SHHNLG
Trigger: CCCTAAATTATGATGACTCCAAGTCCAAGCCCACCC...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CAA 72 bp TTACTAAGCTCCTGGGTTAGGCTGAAACAAAGCCGCTaGCCCCCATGTCACAGCTGTGGATACCTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LLSSWVRLKQSR*PPCHSCGYLGS
Trigger: AGACCCTAGGTATCCACAGCTGTGACATGGGGGCAAGCGGCTTTGTTTCAGCCTAACCCAGGAGCTTAGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp AGACAGACTCAAAGACAGTCCTTGAAACTTGGCTTCCTGATGCCCAGGCTGGTGGCGAGTTTAAGATGGTaGAGAGGAACAGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RQTQRQSLKLGFLMPRLVASLRW*RGTAGA
Trigger: TGCCCCAGCTGTTCCTCTTCACCATCTTAAACTCGC...CACCAGCCTGGGCATCAGGAAGCCAAGTTTCAAGGACTGTCTTTGAGTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp CACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGTTGTTTGGGAGGAGCTaGAGGCCTCTATCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: HSHAYLGKFNLAQSPNSQLFGRS*RPLSVP
Trigger: AGGCACAGATAGAGGCCTTCAGCTCCTCCCAAACAA...CTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp GCGAGCTGGGCCCAGGTACCAGGACAAAGTTTGCTGCCCCAGGTAAGGTTGGATTCTGAAACTATGGCCTaGGCTTCGAATTTAAAACCC +
Preference number: 4 (lower is better)
Translates to: ASWAQVPGQSLLPQVRLDSETMA*ASNLKP
Trigger: GGGTTTTAAATTCGAAGCTCAGGCCATAGTTTCAGA...ATCCAACCTTACCTGGGGCAGCAAACTTTGTCCTGGTACCTGGGCCCAGCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp CCCACACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGATGAGCACTGTCTCATaGAGGTCTGGGGTAAGGGTG +
Preference number: 4 (lower is better)
Translates to: PTLSRLPGQIQSCPITKQMSTVS*RSGVRV
Trigger: CACCCTTACCCCAGACCTTCATGAGACAGTGCTCAT...CTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp ACCAAACAGCCAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCATATCACCAGGTCTGTaGCCACCTGGACATGGGTAT +
Preference number: 4 (lower is better)
Translates to: TKQPGHWDPADSAGGERSISPGL*PPGHGY
Trigger: ATACCCATGTCCAGGTGGGCACAGACCTGGTGATAT...GCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR GCA 90 bp GCGAGCTGGGCCCAGGTACCAGGACAAAGTTTGCTGCCCCAGGTAAGGTTGGATCCATGTCTCTGTTGTTaGATTCTGCAAAGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: ASWAQVPGQSLLPQVRLDPCLCC*ILQSQK
Trigger: CTTCTGACTTTGCAGAATGCAACAACAGAGACATGG...ATCCAACCTTACCTGGGGCAGCAAACTTTGTCCTGGTACCTGGGCCCAGCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp TTCTGGGAAACGCACTGGCTTCATGAGCACTGTCTCATGAAGGTCTGGGGTAAGGATGTACGTAAGAGGTaGCAGCAACTCTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: FWETHWLHEHCLMKVWGKDVRKR*QQLCRD
Trigger: GTCCCTGCAGAGTTGCTGGCACCTCTTACGTACATC...CTTACCCCAGACCTTCATGAGACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTGTTAAGGAGTCACTCTaGTTCCTGAAATGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCVKESL*FLKWKC
Trigger: GCACTTCCATTTCAGGAAGCAGAGTGACTCCTTAAC...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTGGGCAAATTCAATCTTaGCCAATCACCAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCGQIQS*PITKQP
Trigger: TGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCC...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CCCACACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGTTGAGCGATTCTAGATaGAGTCTTGGCGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: PTLSRLPGQIQSCPITKQLSDSR*SLGAKG
Trigger: GCCCTTGGCGCCAAGACTGCATCTAGAATCGCTCAA...CTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AAGCGTGTCTTGCCTTTCCTCCTGGAGGAAATGGGTCACTCAGTAGGCGCAGTCGCATGCAGGTTCATGTaGATGCGTGTTAAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: KRVLPFLLEEMGHSVGAVACRFM*MRVKES
Trigger: TGACTCCTTAACACGCATCCACATGAACCTGCATGC...GACTGCGCCTACTGAGTGACCCATTTCCTCCAGGAGGAAAGGCAAGACACGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp ACCAAACAGCCAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCGACTACTGTGTTGTTTaGGAGGAGCTGAAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TKQPGHWDPADSAGGERSDYCVV*EELKAS
Trigger: AGAGGCCTTCAGCTCCTCCCAAACAACACAGTAGTC...GCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AAGCGTGTCTTGCCTTTCCTCCTGGAGGAAATGGGTCACTCAGTAGGCGCAGTCGGGTGGGCTTGGACTTaGAGTCATCATAATTTAGGG +
Preference number: 4 (lower is better)
Translates to: KRVLPFLLEEMGHSVGAVGWAWT*SHHNLG
Trigger: CCCTAAATTATGATGACTCCAAGTCCAAGCCCACCC...GACTGCGCCTACTGAGTGACCCATTTCCTCCAGGAGGAAAGGCAAGACACGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp TGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTGGGATCCAGCGAACCTCCCAATCTTTaGGAAGGGTGGGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: WANSILPNHQTARTLGSSEPPNL*EGWAWT
Trigger: AGTCCAAGCCCACCCTTCCCAAAGATTGGGAGGTTC...GCTGGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CCAAGAAAACTGCGGGATGGGCTACTGGTCCAGATGGTCTATGGAAGTCTTGGGTCCAGGCTTTGGTTGTaGCAGAAGCTGATGTTCACA +
Preference number: 4 (lower is better)
Translates to: PRKLRDGLLVQMVYGSLGSRLWL*QKLMFT
Trigger: TGTGAACATCAGCTTCTGGCACAACCAAAGCCTGGA...CCCAAGACTTCCATAGACCATCTGGACCAGTAGCCCATCCCGCAGTTTTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp ACCAAACAGCCAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCTTCCTGAAATGGAAGTaGAGCAGGACTGTGATCAGC +
Preference number: 4 (lower is better)
Translates to: TKQPGHWDPADSAGGERSFLKWK*SRTVIS
Trigger: GCTGATCACAGTCCTGCTGCACTTCCATTTCAGGAA...GCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp ATGCAATTTTTACTAAGCTCCTGGGTTAGGCTGAAACAAAGCCGCTTGCCCCCAAGCAGCACGGAGGCATaGAGGTTCATGTGGATGCGT +
Preference number: 4 (lower is better)
Translates to: MQFLLSSWVRLKQSRLPPSSTEA*RFMWMR
Trigger: ACGCATCCACATGAACCTGCATGCCTCCGTGCTGCT...TGGGGGCAAGCGGCTTTGTTTCAGCCTAACCCAGGAGCTTAGTAAAAATTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR GCA 90 bp CCCACACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGGCCTACGCCACTCACTaGCTGGTGAAGGAGTTATTT +
Preference number: 4 (lower is better)
Translates to: PTLSRLPGQIQSCPITKQAYATH*LVKELF
Trigger: AAATAACTCCTTCACCAGGCAGTGAGTGGCGTAGGC...CTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp ACCAAACAGCCAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCGCATGCAGGTTCATGTaGATGCGTGTTAAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: TKQPGHWDPADSAGGERSACRFM*MRVKES
Trigger: TGACTCCTTAACACGCATCCACATGAACCTGCATGC...GCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp AGACAGACTCAAAGACAGTCCTTGAAACTTGGCTTCCTGATGCCCAGGCTGGTGGACTACTGTGTTGTTTaGGAGGAGCTGAAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RQTQRQSLKLGFLMPRLVDYCVV*EELKAS
Trigger: AGAGGCCTTCAGCTCCTCCCAAACAACACAGTAGTC...CACCAGCCTGGGCATCAGGAAGCCAAGTTTCAAGGACTGTCTTTGAGTCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGAAACAGCCAGGACACTaGGATCCAGCTGATTCAGCT +
Preference number: 4 (lower is better)
Translates to: HSHAYLGKFNLAQSPNSQKQPGH*DPADSA
Trigger: AGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTT...CTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp GGGAAAAGAGACAAATGGCCGTGTAAGCGTGTCTTGCCTTTCCTCCTGGAGGAATCTTGCCTTTCCTCCTaGAGGAAATGGGTCACTCAG +
Preference number: 4 (lower is better)
Translates to: GKRDKWPCKRVLPFLLEESCLSS*RKWVTQ
Trigger: CTGAGTGACCCATTTCCTCCAGGAGGAAAGGCAAGA...TTCCTCCAGGAGGAAAGGCAAGACACGCTTACACGGCCATTTGTCTCTTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp TTCTGGGAAACGCACTGGCTTCATGAGCACTGTCTCATGAAGGTCTGGGGTAAGCTAGCACACCAAGCTTaGACACATATCTGCGGATGT +
Preference number: 4 (lower is better)
Translates to: FWETHWLHEHCLMKVWGKLAHQA*THICGC
Trigger: ACATCCGCAGATATGTGTTCAAGCTTGGTGTGCTAG...CTTACCCCAGACCTTCATGAGACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp ATGCAATTTTTACTAAGCTCCTGGGTTAGGCTGAAACAAAGCCGCTTGCCCCCATTGTTTGGGAGGAGCTaGAGGCCTCTATCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: MQFLLSSWVRLKQSRLPPLFGRS*RPLSVP
Trigger: AGGCACAGATAGAGGCCTTCAGCTCCTCCCAAACAA...TGGGGGCAAGCGGCTTTGTTTCAGCCTAACCCAGGAGCTTAGTAAAAATTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp GGGAAAAGAGACAAATGGCCGTGTAAGCGTGTCTTGCCTTTCCTCCTGGAGGAAGTAAGGGTGATTCTCTaGAACTATGGCCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GKRDKWPCKRVLPFLLEEVRVIL*NYGLSF
Trigger: GAAGCTCAGGCCATAGTTTCAGAGAATCACCCTTAC...TTCCTCCAGGAGGAAAGGCAAGACACGCTTACACGGCCATTTGTCTCTTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp ACCAAACAGCCAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCCCTATTTTCTGCCTGTaGCCTTCGAGGTCATCAAAA +
Preference number: 4 (lower is better)
Translates to: TKQPGHWDPADSAGGERSPIFCL*PSRSSK
Trigger: TTTTGATGACCTCGAAGGTCACAGGCAGAAAATAGG...GCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CCCACACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGTGGGAAGGGTGGGCTTaGACTTGGAGTCATCATAAT +
Preference number: 4 (lower is better)
Translates to: PTLSRLPGQIQSCPITKQWEGWA*TWSHHN
Trigger: ATTATGATGACTCCAAGTCCAAGCCCACCCTTCCCA...CTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp TTCTGGGAAACGCACTGGCTTCATGAGCACTGTCTCATGAAGGTCTGGGGTAAGTGGGAAGGGTGGGCTTaGACTTGGAGTCATCATAAT +
Preference number: 4 (lower is better)
Translates to: FWETHWLHEHCLMKVWGKWEGWA*TWSHHN
Trigger: ATTATGATGACTCCAAGTCCAAGCCCACCCTTCCCA...CTTACCCCAGACCTTCATGAGACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp TTCTGGGAAACGCACTGGCTTCATGAGCACTGTCTCATGAAGGTCTGGGGTAAGTGTCTCATGAAGGTCTaGGGTAAGGGTGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: FWETHWLHEHCLMKVWGKCLMKV*GKGDSL
Trigger: CAGAGAATCACCCTTACCCCAGACCTTCATGAGACA...CTTACCCCAGACCTTCATGAGACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp CACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGTGTCTCATGAAGGTCTaGGGTAAGGGTGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: HSHAYLGKFNLAQSPNSQCLMKV*GKGDSL
Trigger: CAGAGAATCACCCTTACCCCAGACCTTCATGAGACA...CTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp ATGCAATTTTTACTAAGCTCCTGGGTTAGGCTGAAACAAAGCCGCTTGCCCCCAAGTGCACCGCCGCATTaGGAAAAGAGACAAATGGCC +
Preference number: 4 (lower is better)
Translates to: MQFLLSSWVRLKQSRLPPSAPPH*EKRQMA
Trigger: GGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACT...TGGGGGCAAGCGGCTTTGTTTCAGCCTAACCCAGGAGCTTAGTAAAAATTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp ATGCAATTTTTACTAAGCTCCTGGGTTAGGCTGAAACAAAGCCGCTTGCCCCCAGGCTACTGGTCCAGATaGTCTATGGAAGTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: MQFLLSSWVRLKQSRLPPGYWSR*SMEVLG
Trigger: TCCCAAGACTTCCATAGACCATCTGGACCAGTAGCC...TGGGGGCAAGCGGCTTTGTTTCAGCCTAACCCAGGAGCTTAGTAAAAATTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CCA 90 bp ATGCAATTTTTACTAAGCTCCTGGGTTAGGCTGAAACAAAGCCGCTTGCCCCCAAAGAAAACTGCGGGATaGGCTACTGGTCCAGATGGT +
Preference number: 4 (lower is better)
Translates to: MQFLLSSWVRLKQSRLPPKKTAG*ATGPDG
Trigger: ACCATCTGGACCAGTAGCCCATCCCGCAGTTTTCTT...TGGGGGCAAGCGGCTTTGTTTCAGCCTAACCCAGGAGCTTAGTAAAAATTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
3UTR CAA 72 bp ATTGGGAAAAGAGACAAATGGCCGTGTAAGCGTGTCTaGCCTTTCCTCCTGGAGGAAATGGGTCACTCAGTA +
Preference number: 4 (lower is better)
Translates to: IGKRDKWPCKRV*PFLLEEMGHSV
Trigger: TACTGAGTGACCCATTTCCTCCAGGAGGAAAGGCAAGACACGCTTACACGGCCATTTGTCTCTTTTCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR TCA 90 bp CACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGTCTGAAACTATGGCCTaGGCTTCGAATTTAAAACCC +
Preference number: 4 (lower is better)
Translates to: HSHAYLGKFNLAQSPNSQSETMA*ASNLKP
Trigger: GGGTTTTAAATTCGAAGCTCAGGCCATAGTTTCAGA...CTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp GCAGGCCTGCCACCCTCTCTAGCAGGAGCCGTAGCCTCAGGCTACTGGCGGCCAGTGGCAGAGCTGGCATaGGAGCCCAGGCAGCCTGGC +
Preference number: 5 (lower is better)
Translates to: AGLPPSLAGAVASGYWRPVAELA*EPRQPG
Trigger: GCCAGGCTGCCTGGGCTCCAATGCCAGCTCTGCCAC...TGGCCGCCAGTAGCCTGAGGCTACGGCTCCTGCTAGAGAGGGTGGCAGGCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS CCA 90 bp GCAGGCCTGCCACCCTCTCTAGCAGGAGCCGTAGCCTCAGGCTACTaGCGGCCAGAGAGGCTGAGGATTCCAGGCCAGGAGGCCCGGACT +
Preference number: 5 (lower is better)
Translates to: AGLPPSLAGAVASGY*RPERLRIPGQEART
Trigger: AGTCCGGGCCTCCTGGCCTGGAATCCTCAGCCTCTCTGGCCGCCAGTAGCCTGAGGCTACGGCTCCTGCTAGAGAGGGTGGCAGGCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340339.4
ENST00000349457.8
ENST00000394361.8
ENST00000564607.1
CDS-3UTR CAA 90 bp TGCTCTGGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGAAAGTGCACCGTCCCTGGGGCGGGTCTaGCAGGCGTCCCGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: CSGASYVWGAAPKSESAPSLGRV*QASRVS
Trigger: GCTGACCCGGGACGCCTGCAAGACCCGCCCCAGGGA...CGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS TCA 90 bp GCTGAGCAGCGCGTAGTGCAGGGCAGCGGCCAGAGCCGTGCATGCTaGCCCGGGCACAGGAGACATTGCGAATGCGGGGCTCAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: AEQRVVQGSGQSRAC*PGHRRHCECGAQQE
Trigger: TTCCTGCTGAGCCCCGCATTCGCAATGTCTCCTGTGCCCGGGTCAGCATGCACGGCTCTGGCCGCTGCCCTGCACTACGCGCTGCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340339.4
ENST00000349457.8
ENST00000394361.8
ENST00000564607.1
CDS-3UTR CAA 90 bp AGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAAAAGGCCCTCCCTGGGGCGGGTCTaGCAGGCGTCCCGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: RAMPSPQCLERPWKWKRPSLGRV*QASRVS
Trigger: GCTGACCCGGGACGCCTGCAAGACCCGCCCCAGGGA...GGGCCTTTTCCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS GCA 90 bp GGAGGGTGGGTCCCCAGCTTGCTCACCAGGATATCACCAGGTCTGTaGCCACCTGGACATGGGTATGGCCAGTGCCCACTGAGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GGWVPSLLTRISPGL*PPGHGYGQCPLRGL
Trigger: CAGGCCCCTCAGTGGGCACTGGCCATACCCATGTCCAGGTGGGCACAGACCTGGTGATATCCTGGTGAGCAAGCTGGGGACCCACCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS TCA 90 bp ATCCATGCCCTGTGCAGAGTCTCCTCCAAGAACTGGCTCCGGCCCTaGGAAGCTGCCGCTGCCGTCTCAGCTGCTGTCTCGGCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: IHALCRVSSKNWLRP*EAAAAVSAAVSAAV
Trigger: GACAGCAGCCGAGACAGCAGCTGAGACGGCAGCGGCAGCTTCTCAGGGCCGGAGCCAGTTCTTGGAGGAGACTCTGCACAGGGCATGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349457.8
ENST00000394361.8
ENST00000564607.1
ENST00000564983.5
CDS GCA 90 bp CCTGTGCAGAGTCTCCTCCAAGAACTGGCTCCGGCCCTGAGAAGCTaGCGCTGCCGTCTCAGCTGCTGTCTCGGCTGCTGTCTTGTAGCT +
Preference number: 5 (lower is better)
Translates to: PVQSLLQELAPALRS*RCRLSCCLGCCLVA
Trigger: AGCTACAAGACAGCAGCCGAGACAGCAGCTGAGACGGCAGCGGCAGCTTCTCAGGGCCGGAGCCAGTTCTTGGAGGAGACTCTGCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349457.8
CDS-3UTR CAA 90 bp TGCTCTGGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGAAAGTGCACCGGCCTCTATCTGTGCCTaGGCCTCTGCTTCTGAGCGG +
Preference number: 5 (lower is better)
Translates to: CSGASYVWGAAPKSESAPASICA*ASASER
Trigger: CCGCTCAGAAGCAGAGGCCAAGGCACAGATAGAGGC...CGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp ACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCACTGGCTTCATGAGCACTGTCGTGGCAGAGCTGGCATaGGAGCCCAGGCAGCCTGGC +
Preference number: 5 (lower is better)
Translates to: TVPPSVRSGKRTGFMSTVVAELA*EPRQPG
Trigger: GCCAGGCTGCCTGGGCTCCAATGCCAGCTCTGCCAC...GACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAACGAACACTAGGCGGCACCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp GCAGGCCTGCCACCCTCTCTAGCAGGAGCCGTAGCCTCAGGCTACTGGCGGCCACCTAGCACACCAAGCTaGAACACATATCTGCGGATG +
Preference number: 5 (lower is better)
Translates to: AGLPPSLAGAVASGYWRPPSTPS*NTYLRM
Trigger: CATCCGCAGATATGTGTTCAAGCTTGGTGTGCTAGG...TGGCCGCCAGTAGCCTGAGGCTACGGCTCCTGCTAGAGAGGGTGGCAGGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp AGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAAAAGGCCCCTGCCCCAGGTAAGGTaGGATCTGCCCCGGAGCAAA +
Preference number: 5 (lower is better)
Translates to: RAMPSPQCLERPWKWKRPLPQVR*DLPRSK
Trigger: TTTGCTCCGGGGCAGATCCAACCTTACCTGGGGCAG...GGGCCTTTTCCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp TGCTCTGGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGAAAGTGCACCGGCACAGATCTCTACATaGCCCCAGATGTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: CSGASYVWGAAPKSESAPAQIST*PQMWSC
Trigger: GCAGCTCCACATCTGGGGCAATGTAGAGATCTGTGC...CGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR CAA 90 bp TGCTCTGGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGAAAGTGCACCGCCGTATACCGAGCTCTaGACAGAGAGGGAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: CSGASYVWGAAPKSESAPPYTEL*TERESS
Trigger: GCTGCTTTCCCTCTCTGTCAAGAGCTCGGTATACGG...CGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp AGTCTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTCCGTGTAAGCGTGTCTaGCCTTTCCTCCTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: SLGSTAGGASGNGGTSQSPCKRV*PFLLEE
Trigger: TTCCTCCAGGAGGAAAGGCAAGACACGCTTACACGG...AGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS GCA 90 bp AGGATATCACCAGGTCTGTGCCCACCTGGACATGGGTATGGCCAGTaGCCACTGAGGGGCCTGTGGATAAGGACAGAGAACTGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: RISPGLCPPGHGYGQ*PLRGLWIRTENWAE
Trigger: CTCTGCCCAGTTCTCTGTCCTTATCCACAGGCCCCTCAGTGGGCACTGGCCATACCCATGTCCAGGTGGGCACAGACCTGGTGATATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS GCA 90 bp GCGGGGCTCAGCAGGAAGGCGATGTTCAGGAGCAGCACGGAGGCATaGAGGTTCATGTGGATGCGTGTTAAGGAGTCACTCTGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: AGLSRKAMFRSSTEA*RFMWMRVKESLCFL
Trigger: CAGGAAGCAGAGTGACTCCTTAACACGCATCCACATGAACCTGCATGCCTCCGTGCTGCTCCTGAACATCGCCTTCCTGCTGAGCCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340339.4
ENST00000349457.8
ENST00000394361.8
ENST00000564607.1
CDS GCA 90 bp TGCAGTGGAAACGGGGGCGCCCCCAGCAGTACCAGGCTTTGGTTGTaGCAGAAGCTGATGTTCACAGGATCCCTGAGGTTGTTCACGTGC +
Preference number: 5 (lower is better)
Translates to: CSGNGGAPSSTRLWL*QKLMFTGSLRLFTC
Trigger: GCACGTGAACAACCTCAGGGATCCTGTGAACATCAGCTTCTGGCACAACCAAAGCCTGGTACTGCTGGGGGCGCCCCCGTTTCCACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000564607.1
ENST00000615867.4
CDS-3UTR CAA 90 bp ACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCACTGGCTTCATGAGCACTGTCGGGTGGGTCCCCAGCTaGCTCACCAGGATATCACCA +
Preference number: 5 (lower is better)
Translates to: TVPPSVRSGKRTGFMSTVGWVPS*LTRISP
Trigger: TGGTGATATCCTGGTGAGCAAGCTGGGGACCCACCC...GACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAACGAACACTAGGCGGCACCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR CAA 90 bp CTTGGGAGCACCGCAGGAGGAGCCTCTGGGAACGGCGGAACCTCCCAATCTTTGCCTTCCAGGCTTTGGTaGTGCCAGAAGCTGATGTTC +
Preference number: 5 (lower is better)
Translates to: LGSTAGGASGNGGTSQSLPSRLW*CQKLMF
Trigger: GAACATCAGCTTCTGGCACAACCAAAGCCTGGAAGG...CAAAGATTGGGAGGTTCCGCCGTTCCCAGAGGCTCCTCCTGCGGTGCTCCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp TCTGCCTGTGACCTTCGAGGTCATCAAAACGGCCCAGTGGCCTGGGGCAGGGCCCCTAGCACACCAAGCTaGAACACATATCTGCGGATG +
Preference number: 5 (lower is better)
Translates to: SACDLRGHQNGPVAWGRAPSTPS*NTYLRM
Trigger: CATCCGCAGATATGTGTTCAAGCTTGGTGTGCTAGG...GGCCCTGCCCCAGGCCACTGGGCCGTTTTGATGACCTCGAAGGTCACAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp AGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAAAAGGCCCATTCTAGATGCAGTCTaGGCGCCAAGGGCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: RAMPSPQCLERPWKWKRPILDAV*APRASE
Trigger: CTCAGAGGCCCTTGGCGCCAAGACTGCATCTAGAAT...GGGCCTTTTCCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCACCGTGTAAGCGTGTCTaGCCTTTCCTCCTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNAPCKRV*PFLLEE
Trigger: TTCCTCCAGGAGGAAAGGCAAGACACGCTTACACGG...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS GCA 90 bp AAGTCAGAAGGCACAGGCACAGGAAAAGGGCACCACAGTGATCCATaGCCTGTGCAGAGTCTCCTCCAAGAACTGGCTCCGGCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: KSEGTGTGKGHHSDP*PVQSLLQELAPALR
Trigger: TCTCAGGGCCGGAGCCAGTTCTTGGAGGAGACTCTGCACAGGGCATGGATCACTGTGGTGCCCTTTTCCTGTGCCTGTGCCTTCTGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340339.4
ENST00000349457.8
ENST00000394361.8
ENST00000564607.1
ENST00000564983.5
ENST00000615867.4
CDS-3UTR CAA 90 bp AGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAAAAGGCCCGTAGCCTTCCAGGCTTaGGTTGTGCCAGAAGCTGAT +
Preference number: 5 (lower is better)
Translates to: RAMPSPQCLERPWKWKRPVAFQA*VVPEAD
Trigger: ATCAGCTTCTGGCACAACCAAAGCCTGGAAGGCTAC...GGGCCTTTTCCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp ACCAAACAGCCAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCCGGGCACAGGAGACATaGCGAATGCGGGGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: TKQPGHWDPADSAGGERSRAQET*RMRGSA
Trigger: TGCTGAGCCCCGCATTCGCAATGTCTCCTGTGCCCG...GCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp GCGAGCTGGGCCCAGGTACCAGGACAAAGTTTGCTGCCCCAGGTAAGGTTGGATCCGTATACCGAGCTCTaGACAGAGAGGGAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: ASWAQVPGQSLLPQVRLDPYTEL*TERESS
Trigger: GCTGCTTTCCCTCTCTGTCAAGAGCTCGGTATACGG...ATCCAACCTTACCTGGGGCAGCAAACTTTGTCCTGGTACCTGGGCCCAGCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp AGACAGACTCAAAGACAGTCCTTGAAACTTGGCTTCCTGATGCCCAGGCTGGTGGCCAGCACCACCAGGTaGAAGAGGGACGTGAGGCCG +
Preference number: 5 (lower is better)
Translates to: RQTQRQSLKLGFLMPRLVASTTR*KRDVRP
Trigger: CGGCCTCACGTCCCTCTTCAACCTGGTGGTGCTGGC...CACCAGCCTGGGCATCAGGAAGCCAAGTTTCAAGGACTGTCTTTGAGTCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp CACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGCCAGCACCACCAGGTaGAAGAGGGACGTGAGGCCG +
Preference number: 5 (lower is better)
Translates to: HSHAYLGKFNLAQSPNSQASTTR*KRDVRP
Trigger: CGGCCTCACGTCCCTCTTCAACCTGGTGGTGCTGGC...CTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp AAGCGTGTCTTGCCTTTCCTCCTGGAGGAAATGGGTCACTCAGTAGGCGCAGTCAGTGGAAAAGGCCCCTaGGCGGTCACAGTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: KRVLPFLLEEMGHSVGAVSGKGP*AVTVAS
Trigger: AGAGGCCACTGTGACCGCCAAGGGGCCTTTTCCACT...GACTGCGCCTACTGAGTGACCCATTTCCTCCAGGAGGAAAGGCAAGACACGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTGGAACCTCCCAATCTTaGGGAAGGGTGGGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCGTSQS*GRVGLD
Trigger: GTCCAAGCCCACCCTTCCCAAAGATTGGGAGGTTCC...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp GGGCCTCTGAGTGTGGACCAACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCACAGAGGCTGAGTGGTTaGTCCACAGTCTCACAGCTA +
Preference number: 5 (lower is better)
Translates to: GPLSVDQRCRLVFVLGNAQRLSG*STVSQL
Trigger: TAGCTGTGAGACTGTGGACAAACCACTCAGCCTCTG...TGCGTTTCCCAGAACGAACACTAGGCGGCACCGTTGGTCCACACTCAGAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS TCA 90 bp TTCTGCAAAGTCAGAAGGCACAGGCACAGGAAAAGGGCACCACAGTaGTCCATGCCCTGTGCAGAGTCTCCTCCAAGAACTGGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: FCKVRRHRHRKRAPQ*SMPCAESPPRTGSG
Trigger: GCCGGAGCCAGTTCTTGGAGGAGACTCTGCACAGGGCATGGATCACTGTGGTGCCCTTTTCCTGTGCCTGTGCCTTCTGACTTTGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340339.4
ENST00000349457.8
ENST00000394361.8
ENST00000564607.1
ENST00000564983.5
ENST00000615867.4
CDS GCA 90 bp CCTTCCAGAAGACACAGGTCAGGGTGTAGCCTTCCTGGGTGGAGATaGTGGGTCAGTCATAGGGTGCAGAGGAAAGGCTGCAGATCAGTG +
Preference number: 5 (lower is better)
Translates to: PSRRHRSGCSLPGWR*WVSHRVQRKGCRSV
Trigger: CACTGATCTGCAGCCTTTCCTCTGCACCCTATGACTGACCCAGCATCTCCACCCAGGAAGGCTACACCCTGACCTGTGTCTTCTGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS-3UTR CAA 90 bp TCTGCCTGTGACCTTCGAGGTCATCAAAACGGCCCAGTGGCCTGGGGCAGGGCCCTTCCCATGTCTCTGTaGTTGCATTCTGCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: SACDLRGHQNGPVAWGRALPMSL*LHSAKS
Trigger: TGACTTTGCAGAATGCAACAACAGAGACATGGGAAG...GGCCCTGCCCCAGGCCACTGGGCCGTTTTGATGACCTCGAAGGTCACAGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp TTCTGGGAAACGCACTGGCTTCATGAGCACTGTCTCATGAAGGTCTGGGGTAAGCGGGCACAGGAGACATaGCGAATGCGGGGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: FWETHWLHEHCLMKVWGKRAQET*RMRGSA
Trigger: TGCTGAGCCCCGCATTCGCAATGTCTCCTGTGCCCG...CTTACCCCAGACCTTCATGAGACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp CCAAGAAAACTGCGGGATGGGCTACTGGTCCAGATGGTCTATGGAAGTCTTGGGGCCTCTATCTGTGCCTaGGCCTCTGCTTCTGAGCGG +
Preference number: 5 (lower is better)
Translates to: PRKLRDGLLVQMVYGSLGASICA*ASASER
Trigger: CCGCTCAGAAGCAGAGGCCAAGGCACAGATAGAGGC...CCCAAGACTTCCATAGACCATCTGGACCAGTAGCCCATCCCGCAGTTTTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS GCA 90 bp GACATGCTGTCCCCAGGATCCAATCCAGGTCACTCTGAAAGGAGCTaGACCTGCTCCAGATTGCCAAGCACAAACTGTGTGCCAGGTCCT +
Preference number: 5 (lower is better)
Translates to: DMLSPGSNPGHSERS*TCSRLPSTNCVPGP
Trigger: AGGACCTGGCACACAGTTTGTGCTTGGCAATCTGGAGCAGGTGCAGCTCCTTTCAGAGTGACCTGGATTGGATCCTGGGGACAGCATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS GCA 90 bp AGTGTCTGGGAGTCCTGGGGGCCAACGGTGACTCAACTGCACATTTaGCAACATTTTACCAGGCACTGGCTGGCCTTTGGCTTCAGACAG +
Preference number: 5 (lower is better)
Translates to: SVWESWGPTVTQLHI*QHFTRHWLAFGFRQ
Trigger: CTGTCTGAAGCCAAAGGCCAGCCAGTGCCTGGTAAAATGTTGGCAAATGTGCAGTTGAGTCACCGTTGGCCCCCAGGACTCCCAGACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS CCA 90 bp GGGGGAGACTCATCCACAGACAACCCTAATGCCAAGCCACGTGGGTaGAGAAGTGGAGGAAATGACACAGGTAGTCACGGAAGACCATGG +
Preference number: 5 (lower is better)
Translates to: GGDSSTDNPNAKPRG*RSGGNDTGSHGRPW
Trigger: CCATGGTCTTCCGTGACTACCTGTGTCATTTCCTCCACTTCTCCACCCACGTGGCTTGGCATTAGGGTTGTCTGTGGATGAGTCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS CCA 90 bp TCCAGAAGACACAGGTCAGGGTGTAGCCTTCCTGGGTGGAGATGCTaGGTCAGTCATAGGGTGCAGAGGAAAGGCTGCAGATCAGTGTCT +
Preference number: 5 (lower is better)
Translates to: SRRHRSGCSLPGWRC*VSHRVQRKGCRSVS
Trigger: AGACACTGATCTGCAGCCTTTCCTCTGCACCCTATGACTGACCCAGCATCTCCACCCAGGAAGGCTACACCCTGACCTGTGTCTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS-3UTR CAA 90 bp ACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCACTGGCTTCATGAGCACTGTCCAGGGCTGGGGAGAGTaGCATGAGAACAGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: TVPPSVRSGKRTGFMSTVQGWGE*HENSKV
Trigger: TACTTTGCTGTTCTCATGCAACTCTCCCCAGCCCTG...GACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAACGAACACTAGGCGGCACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp ACCAAACAGCCAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCTGGTCTATGGAAGTCTaGGGAGCACCGCAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: TKQPGHWDPADSAGGERSWSMEV*GAPQEE
Trigger: CTCCTCCTGCGGTGCTCCCAAGACTTCCATAGACCA...GCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp CCCCCAAGAGCGAAAGTGCACCGCCGCATTGGGAAAAGAGACAAATGGCCGTGTAAGTGCACCGCCGCATaGGGAAAAGAGACAAATGGC +
Preference number: 5 (lower is better)
Translates to: PPRAKVHRRIGKRDKWPCKCTAA*GKETNG
Trigger: GCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTT...ACACGGCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTTTCGCTCTTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp AAGCGTGTCTTGCCTTTCCTCCTGGAGGAAATGGGTCACTCAGTAGGCGCAGTCTGCACCTGCTCCAGATaGCCAAGCACAAACTGTGTG +
Preference number: 5 (lower is better)
Translates to: KRVLPFLLEEMGHSVGAVCTCSR*PSTNCV
Trigger: CACACAGTTTGTGCTTGGCAATCTGGAGCAGGTGCA...GACTGCGCCTACTGAGTGACCCATTTCCTCCAGGAGGAAAGGCAAGACACGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS-3UTR CAA 90 bp AGAGCAATGCCTTCCCCTCAGTGCCTGGAGAGGCCGTGGAAGTGGAAAAGGCCCCCCATGTCTCTGTTGTaGCATTCTGCAAAGTCAGAA +
Preference number: 5 (lower is better)
Translates to: RAMPSPQCLERPWKWKRPPMSLL*HSAKSE
Trigger: TTCTGACTTTGCAGAATGCAACAACAGAGACATGGG...GGGCCTTTTCCACTTCCACGGCCTCTCCAGGCACTGAGGGGAAGGCATTGCTCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp TGCTCTGGTGCCAGCTATGTCTGGGGTGCAGCCCCCAAGAGCGAAAGTGCACCGGAGTTGTTTTCATCCTaGAAAAAGTGGGTGTTGGAG +
Preference number: 5 (lower is better)
Translates to: CSGASYVWGAAPKSESAPELFSS*KKWVLE
Trigger: CTCCAACACCCACTTTTTCAAGGATGAAAACAACTC...CGGTGCACTTTCGCTCTTGGGGGCTGCACCCCAGACATAGCTGGCACCAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp TGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTGGGATCCAGCTGTCGAAGACGGGGATaGTGCAGGGTCCGTATACCG +
Preference number: 5 (lower is better)
Translates to: WANSILPNHQTARTLGSSCRRRG*CRVRIP
Trigger: CGGTATACGGACCCTGCACAATCCCCGTCTTCGACA...GCTGGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp CACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGTGTCGAAGACGGGGATaGTGCAGGGTCCGTATACCG +
Preference number: 5 (lower is better)
Translates to: HSHAYLGKFNLAQSPNSQCRRRG*CRVRIP
Trigger: CGGTATACGGACCCTGCACAATCCCCGTCTTCGACA...CTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp GGGAAAAGAGACAAATGGCCGTGTAAGCGTGTCTTGCCTTTCCTCCTGGAGGAAGGAACCTCCCAATCTTaGGGAAGGGTGGGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: GKRDKWPCKRVLPFLLEEGTSQS*GRVGLD
Trigger: GTCCAAGCCCACCCTTCCCAAAGATTGGGAGGTTCC...TTCCTCCAGGAGGAAAGGCAAGACACGCTTACACGGCCATTTGTCTCTTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp CACTCTCACGCCTACCTGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGTGGTCTATGGAAGTCTaGGGAGCACCGCAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: HSHAYLGKFNLAQSPNSQWSMEV*GAPQEE
Trigger: CTCCTCCTGCGGTGCTCCCAAGACTTCCATAGACCA...CTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCAGGTAGGCGTGAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS TCA 90 bp ATCCATCATGCCACAGAATGGACAGCCAAGACAGGAGACCATTGCTaGGACGGAGAGAGACTGAGCCACAAGGGCATCAGATCCATCCCT +
Preference number: 5 (lower is better)
Translates to: IHHATEWTAKTGDHC*DGERLSHKGIRSIP
Trigger: AGGGATGGATCTGATGCCCTTGTGGCTCAGTCTCTCTCCGTCTCAGCAATGGTCTCCTGTCTTGGCTGTCCATTCTGTGGCATGATGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS CCA 90 bp AGGAAGGCGATGTTCAGGAGCAGCACGGAGGCATGCAGGTTCATGTaGATGCGTGTTAAGGAGTCACTCTGCTTCCTGAAATGGAAGTGC +
Preference number: 5 (lower is better)
Translates to: RKAMFRSSTEACRFM*MRVKESLCFLKWKC
Trigger: GCACTTCCATTTCAGGAAGCAGAGTGACTCCTTAACACGCATCCACATGAACCTGCATGCCTCCGTGCTGCTCCTGAACATCGCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340339.4
ENST00000349457.8
ENST00000394361.8
ENST00000564607.1
CDS CCA 90 bp TCAACTGCACATTTGCCAACATTTTACCAGGCACTGGCTGGCCTTTaGCTTCAGACAGTCTCAGATTCCTGTCCCACCTCCACTGTGGGC +
Preference number: 5 (lower is better)
Translates to: STAHLPTFYQALAGL*LQTVSDSCPTSTVG
Trigger: GCCCACAGTGGAGGTGGGACAGGAATCTGAGACTGTCTGAAGCCAAAGGCCAGCCAGTGCCTGGTAAAATGTTGGCAAATGTGCAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS-3UTR CAA 90 bp ACCAAACAGCCAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCGTAGCCTTCCAGGCTTaGGTTGTGCCAGAAGCTGAT +
Preference number: 5 (lower is better)
Translates to: TKQPGHWDPADSAGGERSVAFQA*VVPEAD
Trigger: ATCAGCTTCTGGCACAACCAAAGCCTGGAAGGCTAC...GCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp ATGCAATTTTTACTAAGCTCCTGGGTTAGGCTGAAACAAAGCCGCTTGCCCCCACTGCCCCAGGTAAGGTaGGATCTGCCCCGGAGCAAA +
Preference number: 5 (lower is better)
Translates to: MQFLLSSWVRLKQSRLPPLPQVR*DLPRSK
Trigger: TTTGCTCCGGGGCAGATCCAACCTTACCTGGGGCAG...TGGGGGCAAGCGGCTTTGTTTCAGCCTAACCCAGGAGCTTAGTAAAAATTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp ACGGTGCCGCCTAGTGTTCGTTCTGGGAAACGCACTGGCTTCATGAGCACTGTCTGGGCAAATTCAATCTaGCCCAATCACCAAACAGCC +
Preference number: 5 (lower is better)
Translates to: TVPPSVRSGKRTGFMSTVWANSI*PNHQTA
Trigger: GGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA...GACAGTGCTCATGAAGCCAGTGCGTTTCCCAGAACGAACACTAGGCGGCACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp TGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTGGGATCCAGCATTCTAGATGCAGTCTaGGCGCCAAGGGCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: WANSILPNHQTARTLGSSILDAV*APRASE
Trigger: CTCAGAGGCCCTTGGCGCCAAGACTGCATCTAGAAT...GCTGGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp GCGAGCTGGGCCCAGGTACCAGGACAAAGTTTGCTGCCCCAGGTAAGGTTGGATTCTGCAAACAGGTGTTaGAGCGATTCTAGATGCAGT +
Preference number: 5 (lower is better)
Translates to: ASWAQVPGQSLLPQVRLDSANRC*SDSRCS
Trigger: ACTGCATCTAGAATCGCTCAAACACCTGTTTGCAGA...ATCCAACCTTACCTGGGGCAGCAAACTTTGTCCTGGTACCTGGGCCCAGCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS CCA 90 bp CCAACGGTGACTCAACTGCACATTTGCCAACATTTTACCAGGCACTaGCTGGCCTTTGGCTTCAGACAGTCTCAGATTCCTGTCCCACCT +
Preference number: 5 (lower is better)
Translates to: PTVTQLHICQHFTRH*LAFGFRQSQIPVPP
Trigger: AGGTGGGACAGGAATCTGAGACTGTCTGAAGCCAAAGGCCAGCCAGTGCCTGGTAAAATGTTGGCAAATGTGCAGTTGAGTCACCGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS-3UTR CAA 90 bp AGACAGACTCAAAGACAGTCCTTGAAACTTGGCTTCCTGATGCCCAGGCTGGTGCCTTCCAGGCTTTGGTaGTGCCAGAAGCTGATGTTC +
Preference number: 5 (lower is better)
Translates to: RQTQRQSLKLGFLMPRLVPSRLW*CQKLMF
Trigger: GAACATCAGCTTCTGGCACAACCAAAGCCTGGAAGG...CACCAGCCTGGGCATCAGGAAGCCAAGTTTCAAGGACTGTCTTTGAGTCTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp AGACAGACTCAAAGACAGTCCTTGAAACTTGGCTTCCTGATGCCCAGGCTGGTGGTACCAGGACAAAGTTaGCTGCCCCAGGTAAGGTTG +
Preference number: 5 (lower is better)
Translates to: RQTQRQSLKLGFLMPRLVVPGQS*LPQVRL
Trigger: CAACCTTACCTGGGGCAGCAAACTTTGTCCTGGTAC...CACCAGCCTGGGCATCAGGAAGCCAAGTTTCAAGGACTGTCTTTGAGTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp TGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTGGGATCCAGCGTACCAGGACAAAGTTaGCTGCCCCAGGTAAGGTTG +
Preference number: 5 (lower is better)
Translates to: WANSILPNHQTARTLGSSVPGQS*LPQVRL
Trigger: CAACCTTACCTGGGGCAGCAAACTTTGTCCTGGTAC...GCTGGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp CAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCGTTTTCCTCTAAGTGCACCGCCGCATaGGGAAAAGAGACAAATGGC +
Preference number: 5 (lower is better)
Translates to: QDTGIQLIQLEEKEAFSSKCTAA*GKETNG
Trigger: GCCATTTGTCTCTTTTCCCAATGCGGCGGTGCACTT...AGAGGAAAACGCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp ACCAAACAGCCAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCTGGGCAAATTCAATCTaGCCCAATCACCAAACAGCC +
Preference number: 5 (lower is better)
Translates to: TKQPGHWDPADSAGGERSWANSI*PNHQTA
Trigger: GGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA...GCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS TCA 90 bp AGAAATGCACAGTTAAGAGTCTACATTAGACTAACCCTGACCCACTaGTTCAAGGTGCAGGCTTGGGGTGGGAGGCACATCCAACTCACC +
Preference number: 5 (lower is better)
Translates to: RNAQLRVYIRLTLTH*FKVQAWGGRHIQLT
Trigger: GGTGAGTTGGATGTGCCTCCCACCCCAAGCCTGCACCTTGAATCAGTGGGTCAGGGTTAGTCTAATGTAGACTCTTAACTGTGCATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564983.5
CDS GCA 90 bp ACCTCCACTGTGGGCTCTCAGAGTGACCCAGGCAAGACACCAAGTTaGTCTGAGCCTCAGTTTAGTCATCTACAGAATAGGATCATTCGT +
Preference number: 5 (lower is better)
Translates to: TSTVGSQSDPGKTPS*SEPQFSHLQNRIIR
Trigger: ACGAATGATCCTATTCTGTAGATGACTAAACTGAGGCTCAGAGCAACTTGGTGTCTTGCCTGGGTCACTCTGAGAGCCCACAGTGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS-3UTR CAA 90 bp ATGCAATTTTTACTAAGCTCCTGGGTTAGGCTGAAACAAAGCCGCTTGCCCCCACAGGGCTGGGGAGAGTaGCATGAGAACAGCAAAGTA +
Preference number: 5 (lower is better)
Translates to: MQFLLSSWVRLKQSRLPPQGWGE*HENSKV
Trigger: TACTTTGCTGTTCTCATGCAACTCTCCCCAGCCCTG...TGGGGGCAAGCGGCTTTGTTTCAGCCTAACCCAGGAGCTTAGTAAAAATTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp CCAAGAAAACTGCGGGATGGGCTACTGGTCCAGATGGTCTATGGAAGTCTTGGGACTCAAAGACAGTCCTaGAAACTTGGCTTCCTGATG +
Preference number: 5 (lower is better)
Translates to: PRKLRDGLLVQMVYGSLGTQRQS*KLGFLM
Trigger: CATCAGGAAGCCAAGTTTCAAGGACTGTCTTTGAGT...CCCAAGACTTCCATAGACCATCTGGACCAGTAGCCCATCCCGCAGTTTTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp ACCAAACAGCCAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCTCTGCAAACAGGTGTTaGAGCGATTCTAGATGCAGT +
Preference number: 5 (lower is better)
Translates to: TKQPGHWDPADSAGGERSSANRC*SDSRCS
Trigger: ACTGCATCTAGAATCGCTCAAACACCTGTTTGCAGA...GCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp ATGCAATTTTTACTAAGCTCCTGGGTTAGGCTGAAACAAAGCCGCTTGCCCCCACAGAGGCTGAGTGGTTaGTCCACAGTCTCACAGCTA +
Preference number: 5 (lower is better)
Translates to: MQFLLSSWVRLKQSRLPPQRLSG*STVSQL
Trigger: TAGCTGTGAGACTGTGGACAAACCACTCAGCCTCTG...TGGGGGCAAGCGGCTTTGTTTCAGCCTAACCCAGGAGCTTAGTAAAAATTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp AGACAGACTCAAAGACAGTCCTTGAAACTTGGCTTCCTGATGCCCAGGCTGGTGCCCATGTCTCTGTTGTaGCATTCTGCAAAGTCAGAA +
Preference number: 5 (lower is better)
Translates to: RQTQRQSLKLGFLMPRLVPMSLL*HSAKSE
Trigger: TTCTGACTTTGCAGAATGCAACAACAGAGACATGGG...CACCAGCCTGGGCATCAGGAAGCCAAGTTTCAAGGACTGTCTTTGAGTCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp TGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTGGGATCCAGCCTTCCCATGTCTCTGTaGTTGCATTCTGCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: WANSILPNHQTARTLGSSLPMSL*LHSAKS
Trigger: TGACTTTGCAGAATGCAACAACAGAGACATGGGAAG...GCTGGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp ACCAAACAGCCAGGACACTGGGATCCAGCTGATTCAGCTGGAGGAGAAAGAAGCGAGTTGTTTTCATCCTaGAAAAAGTGGGTGTTGGAG +
Preference number: 5 (lower is better)
Translates to: TKQPGHWDPADSAGGERSELFSS*KKWVLE
Trigger: CTCCAACACCCACTTTTTCAAGGATGAAAACAACTC...GCTTCTTTCTCCTCCAGCTGAATCAGCTGGATCCCAGTGTCCTGGCTGTTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS-3UTR CAA 90 bp TGGGCAAATTCAATCTTGCCCAATCACCAAACAGCCAGGACACTGGGATCCAGCACTCAAAGACAGTCCTaGAAACTTGGCTTCCTGATG +
Preference number: 5 (lower is better)
Translates to: WANSILPNHQTARTLGSSTQRQS*KLGFLM
Trigger: CATCAGGAAGCCAAGTTTCAAGGACTGTCTTTGAGT...GCTGGATCCCAGTGTCCTGGCTGTTTGGTGATTGGGCAAGATTGAATTTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340339.4
ENST00000349457.8
CDS GCA 90 bp TCACCTCTAGACATTTCATGGATGTGTGCCAATCAGTTCCCTCTGTaGTCAAGCTGGCTTGAAGTGGTCTTTTCTTACTTGCAACTGAAA +
Preference number: 5 (lower is better)
Translates to: SPLDISWMCANQFPL*SSWLEVVFSYLQLK
Trigger: TTTCAGTTGCAAGTAAGAAAAGACCACTTCAAGCCAGCTTGAGCACAGAGGGAACTGATTGGCACACATCCATGAAATGTCTAGAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS CCA 90 bp TTAGTCATCTACAGAATAGGATCATTCGTACCCATGTTACAACAATaGTGGAAAAACAAAGGGCAACACGGAATCTTGAGTGTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LVIYRIGSFVPMLQQ*WKNKGQHGILSVQL
Trigger: GAGCTGGACACTCAAGATTCCGTGTTGCCCTTTGTTTTTCCACCATTGTTGTAACATGGGTACGAATGATCCTATTCTGTAGATGACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS CCA 90 bp TTATTTCTTGAGCAGGAATTTTCAAAGTGTGATGGATTTCCAAGATaGTTCCACAGGTTTGGGTCTAGTCAAACCAGTGTTCAACAGGAG +
Preference number: 5 (lower is better)
Translates to: LFLEQEFSKCDGFPR*FHRFGSSQTSVQQE
Trigger: CTCCTGTTGAACACTGGTTTGACTAGACCCAAACCTGTGGAACCATCTTGGAAATCCATCACACTTTGAAAATTCCTGCTCAAGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564607.1
ENST00000615867.4
CDS TCA 90 bp CTCTGTGCTCAAGCTGGCTTGAAGTGGTCTTTTCTTACTTGCAACTaGAAGAATTCTGACAAATGCATGAGTAAAAACTTCTCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: LCAQAGLKWSFLTCN*KNSDKCMSKNFSLS
Trigger: AGAGAGAGAGAAGTTTTTACTCATGCATTTGTCAGAATTCTTTCAGTTGCAAGTAAGAAAAGACCACTTCAAGCCAGCTTGAGCACAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS CCA 72 bp TGCAGGCGTCCCGGGTCAGCTCGGCGGGGAACTGCATaGCGTGCTGACCCCGGGCATGCTGACCTCCTGCCT +
Preference number: 6 (lower is better)
Translates to: CRRPGSARRGTA*RADPGHADLLP
Trigger: AGGCAGGAGGTCAGCATGCCCGGGGTCAGCACGCCATGCAGTTCCCCGCCGAGCTGACCCGGGACGCCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340339.4
ENST00000349457.8
ENST00000394361.8
ENST00000564607.1
ENST00000615867.4
CDS TCA 72 bp CGCGTAGTGCAGGGCAGCGGCCAGAGCCGTGCATGCTaGCCCGGGCACAGGAGACATTGCGAATGCGGGGCT +
Preference number: 6 (lower is better)
Translates to: RVVQGSGQSRAC*PGHRRHCECGA
Trigger: AGCCCCGCATTCGCAATGTCTCCTGTGCCCGGGTCAGCATGCACGGCTCTGGCCGCTGCCCTGCACTACGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340339.4
ENST00000349457.8
ENST00000394361.8
ENST00000564607.1
CDS CCA 72 bp CAGCACAGTGACAGTGTCATGGCAGGCCCTGACACTTaGTGCATCCGCCCGCTCCCGCAGCCTGCGCAGGGT +
Preference number: 6 (lower is better)
Translates to: QHSDSVMAGPDT*CIRPLPQPAQG
Trigger: ACCCTGCGCAGGCTGCGGGAGCGGGCGGATGCACCAAGTGTCAGGGCCTGCCATGACACTGTCACTGTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340339.4
ENST00000349457.8
ENST00000394361.8
ENST00000564607.1
ENST00000569839.1
CDS CAA 90 bp GGGCAGCGGCCAGAGCCGTGCATGCTGACCCGGGCACAGGAGACATaGCGAATGCGGGGCTCAGCAGGAAGGCGATGTTCAGGAGCAGCA +
Preference number: 6 (lower is better)
Translates to: GQRPEPCMLTRAQET*RMRGSAGRRCSGAA
Trigger: TGCTGCTCCTGAACATCGCCTTCCTGCTGAGCCCCGCATTCGCAATGTCTCCTGTGCCCGGGTCAGCATGCACGGCTCTGGCCGCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340339.4
ENST00000349457.8
ENST00000394361.8
ENST00000564607.1
CDS CCA 72 bp GACCTCCTGCCTGGGGCACCCGCTTCAGAGTGGCACTaGTCAGCGAGAGGCCAGAGAAGTCACAGCTCAGCT +
Preference number: 6 (lower is better)
Translates to: DLLPGAPASEWH*SARGQRSHSSA
Trigger: AGCTGAGCTGTGACTTCTCTGGCCTCTCGCTGACCAGTGCCACTCTGAAGCGGGTGCCCCAGGCAGGAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340339.4
ENST00000349457.8
ENST00000394361.8
ENST00000564607.1
ENST00000615867.4
CDS GCA 72 bp GATGCTGCAGCCCACGAGGGAGATGTACGTAAGAGGTaGCAGCAACTCTGCAGGGACCAGGGCTGGGGAGAG +
Preference number: 6 (lower is better)
Translates to: DAAAHEGDVRKR*QQLCRDQGWGE
Trigger: CTCTCCCCAGCCCTGGTCCCTGCAGAGTTGCTGGCACCTCTTACGTACATCTCCCTCGTGGGCTGCAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340339.4
ENST00000349457.8
ENST00000394361.8
ENST00000564607.1
CDS GCA 72 bp CTCCAAGAACTGGCTCCGGCCCTGAGAAGCTGCCGCTaGCGTCTCAGCTGCTGTCTCGGCTGCTGTCTTGTA +
Preference number: 6 (lower is better)
Translates to: LQELAPALRSCR*RLSCCLGCCLV
Trigger: TACAAGACAGCAGCCGAGACAGCAGCTGAGACGGCAGCGGCAGCTTCTCAGGGCCGGAGCCAGTTCTTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349457.8
CDS GCA 72 bp CCAGGTCTGTGCCCACCTGGACATGGGTATGGCCAGTaGCCACTGAGGGGCCTGTGGATAAGGACAGAGAAC +
Preference number: 6 (lower is better)
Translates to: PGLCPPGHGYGQ*PLRGLWIRTEN
Trigger: GTTCTCTGTCCTTATCCACAGGCCCCTCAGTGGGCACTGGCCATACCCATGTCCAGGTGGGCACAGACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS GCA 72 bp GTCCCCAGCTTGCTCACCAGGATATCACCAGGTCTGTaGCCACCTGGACATGGGTATGGCCAGTGCCCACTG +
Preference number: 6 (lower is better)
Translates to: VPSLLTRISPGL*PPGHGYGQCPL
Trigger: CAGTGGGCACTGGCCATACCCATGTCCAGGTGGGCACAGACCTGGTGATATCCTGGTGAGCAAGCTGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS CAA 72 bp GGAAACGGGGGCGCCCCCAGCAGTACCAGGCTTTGGTaGTGCCAGAAGCTGATGTTCACAGGATCCCTGAGG +
Preference number: 6 (lower is better)
Translates to: GNGGAPSSTRLW*CQKLMFTGSLR
Trigger: CCTCAGGGATCCTGTGAACATCAGCTTCTGGCACAACCAAAGCCTGGTACTGCTGGGGGCGCCCCCGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000564607.1
ENST00000615867.4
CDS CAA 90 bp GGGTGCAGTGGAAACGGGGGCGCCCCCAGCAGTACCAGGCTTTGGTaGTGCCAGAAGCTGATGTTCACAGGATCCCTGAGGTTGTTCACG +
Preference number: 6 (lower is better)
Translates to: GCSGNGGAPSSTRLW*CQKLMFTGSLRLFT
Trigger: CGTGAACAACCTCAGGGATCCTGTGAACATCAGCTTCTGGCACAACCAAAGCCTGGTACTGCTGGGGGCGCCCCCGTTTCCACTGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000564607.1
ENST00000615867.4
CDS GCA 72 bp GGCACAGGCACAGGAAAAGGGCACCACAGTGATCCATaGCCTGTGCAGAGTCTCCTCCAAGAACTGGCTCCG +
Preference number: 6 (lower is better)
Translates to: GTGTGKGHHSDP*PVQSLLQELAP
Trigger: CGGAGCCAGTTCTTGGAGGAGACTCTGCACAGGGCATGGATCACTGTGGTGCCCTTTTCCTGTGCCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340339.4
ENST00000349457.8
ENST00000394361.8
ENST00000564607.1
ENST00000564983.5
ENST00000615867.4
CDS GCA 72 bp AACGGGGGCGCCCCCAGCAGTACCAGGCTTTGGTTGTaGCAGAAGCTGATGTTCACAGGATCCCTGAGGTTG +
Preference number: 6 (lower is better)
Translates to: NGGAPSSTRLWL*QKLMFTGSLRL
Trigger: CAACCTCAGGGATCCTGTGAACATCAGCTTCTGGCACAACCAAAGCCTGGTACTGCTGGGGGCGCCCCCGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000564607.1
ENST00000615867.4
CDS CCA 72 bp AGTGGAAACGGGGGCGCCCCCAGCAGTACCAGGCTTTaGTTGTGCCAGAAGCTGATGTTCACAGGATCCCTG +
Preference number: 6 (lower is better)
Translates to: SGNGGAPSSTRL*LCQKLMFTGSL
Trigger: CAGGGATCCTGTGAACATCAGCTTCTGGCACAACCAAAGCCTGGTACTGCTGGGGGCGCCCCCGTTTCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000564607.1
ENST00000615867.4
CDS CAA 72 bp CAGTGGAAACGGGGGCGCCCCCAGCAGTACCAGGCTTaGGTTGTGCCAGAAGCTGATGTTCACAGGATCCCT +
Preference number: 6 (lower is better)
Translates to: QWKRGRPQQYQA*VVPEADVHRIP
Trigger: AGGGATCCTGTGAACATCAGCTTCTGGCACAACCAAAGCCTGGTACTGCTGGGGGCGCCCCCGTTTCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000564607.1
ENST00000615867.4
CDS CCA 72 bp AGACCTGCTCTTGTTGGAAATGCTCCACCTCATAGATaGCAGGGATGTCATCGCCACCCACAGGCGCGGGAG +
Preference number: 6 (lower is better)
Translates to: RPALVGNAPPHR*QGCHRHPQARE
Trigger: CTCCCGCGCCTGTGGGTGGCGATGACATCCCTGCCATCTATGAGGTGGAGCATTTCCAACAAGAGCAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569839.1
CDS CAA 72 bp AGGGGAGGTGGGGGCCCTGAACCCTTAGAGGACGTGTaGGATTTCAACACGAGTAGGGCAAGGGCATTCCAG +
Preference number: 6 (lower is better)
Translates to: RGGGGPEPLEDV*DFNTSRARAFQ
Trigger: CTGGAATGCCCTTGCCCTACTCGTGTTGAAATCCAACACGTCCTCTAAGGGTTCAGGGCCCCCACCTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS GCA 72 bp TCCGCACCCAGCATATGGACATGTTCTGGAAGCCTGTaGCATTCTCCCAGCTGTCGAAGACGGGGATTGTGC +
Preference number: 6 (lower is better)
Translates to: SAPSIWTCSGSL*HSPSCRRRGLC
Trigger: GCACAATCCCCGTCTTCGACAGCTGGGAGAATGGCACAGGCTTCCAGAACATGTCCATATGCTGGGTGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340339.4
ENST00000349457.8
ENST00000564607.1
CDS GCA 72 bp GAGTCCTGGGGGCCAACGGTGACTCAACTGCACATTTaGCAACATTTTACCAGGCACTGGCTGGCCTTTGGC +
Preference number: 6 (lower is better)
Translates to: ESWGPTVTQLHI*QHFTRHWLAFG
Trigger: GCCAAAGGCCAGCCAGTGCCTGGTAAAATGTTGGCAAATGTGCAGTTGAGTCACCGTTGGCCCCCAGGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS CAA 72 bp GGAGTCCTGGGGGCCAACGGTGACTCAACTGCACATTaGCCAACATTTTACCAGGCACTGGCTGGCCTTTGG +
Preference number: 6 (lower is better)
Translates to: GVLGANGDSTAH*PTFYQALAGLW
Trigger: CCAAAGGCCAGCCAGTGCCTGGTAAAATGTTGGCAAATGTGCAGTTGAGTCACCGTTGGCCCCCAGGACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS CAA 90 bp CAGTGTCTGGGAGTCCTGGGGGCCAACGGTGACTCAACTGCACATTaGCCAACATTTTACCAGGCACTGGCTGGCCTTTGGCTTCAGACA +
Preference number: 6 (lower is better)
Translates to: QCLGVLGANGDSTAH*PTFYQALAGLWLQT
Trigger: TGTCTGAAGCCAAAGGCCAGCCAGTGCCTGGTAAAATGTTGGCAAATGTGCAGTTGAGTCACCGTTGGCCCCCAGGACTCCCAGACACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS TCA 72 bp GTCAGAAGGCACAGGCACAGGAAAAGGGCACCACAGTaGTCCATGCCCTGTGCAGAGTCTCCTCCAAGAACT +
Preference number: 6 (lower is better)
Translates to: VRRHRHRKRAPQ*SMPCAESPPRT
Trigger: AGTTCTTGGAGGAGACTCTGCACAGGGCATGGATCACTGTGGTGCCCTTTTCCTGTGCCTGTGCCTTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340339.4
ENST00000349457.8
ENST00000394361.8
ENST00000564607.1
ENST00000564983.5
ENST00000615867.4
CDS TCA 72 bp CCAAGACAGGAGACCATTGCTGAGACGGAGAGAGACTaGGCCACAAGGGCATCAGATCCATCCCTGGATCCA +
Preference number: 6 (lower is better)
Translates to: PRQETIAETERD*ATRASDPSLDP
Trigger: TGGATCCAGGGATGGATCTGATGCCCTTGTGGCTCAGTCTCTCTCCGTCTCAGCAATGGTCTCCTGTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS CCA 72 bp TCCAGAAGACACAGGTCAGGGTGTAGCCTTCCTGGGTaGAGATGCTGGGTCAGTCATAGGGTGCAGAGGAAA +
Preference number: 6 (lower is better)
Translates to: SRRHRSGCSLPG*RCWVSHRVQRK
Trigger: TTTCCTCTGCACCCTATGACTGACCCAGCATCTCCACCCAGGAAGGCTACACCCTGACCTGTGTCTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS TCA 72 bp ATGGACATGTGTGACCCAGCTGAACCTTTAAGATCCTaGGACCCTGATCTGCACTGGGGCAGGTTGTGGGTG +
Preference number: 6 (lower is better)
Translates to: MDMCDPAEPLRS*DPDLHWGRLWV
Trigger: CACCCACAACCTGCCCCAGTGCAGATCAGGGTCTCAGGATCTTAAAGGTTCAGCTGGGTCACACATGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS GCA 72 bp TCCCCAGGATCCAATCCAGGTCACTCTGAAAGGAGCTaGACCTGCTCCAGATTGCCAAGCACAAACTGTGTG +
Preference number: 6 (lower is better)
Translates to: SPGSNPGHSERS*TCSRLPSTNCV
Trigger: CACACAGTTTGTGCTTGGCAATCTGGAGCAGGTGCAGCTCCTTTCAGAGTGACCTGGATTGGATCCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS GCA 72 bp AACAAGCAGCCCTGTCTCTGTTCCAGGATCAGCATCTaGACTTACCCTAGGAGCTCACTCCTTCACCCCAGT +
Preference number: 6 (lower is better)
Translates to: NKQPCLCSRISI*TYPRSSLLHPS
Trigger: ACTGGGGTGAAGGAGTGAGCTCCTAGGGTAAGTGCAGATGCTGATCCTGGAACAGAGACAGGGCTGCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS CAA 72 bp TCATGCCACAGAATGGACAGCCAAGACAGGAGACCATaGCTGAGACGGAGAGAGACTGAGCCACAAGGGCAT +
Preference number: 6 (lower is better)
Translates to: SCHRMDSQDRRP*LRRRETEPQGH
Trigger: ATGCCCTTGTGGCTCAGTCTCTCTCCGTCTCAGCAATGGTCTCCTGTCTTGGCTGTCCATTCTGTGGCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS CAA 90 bp CAGCATCCATCATGCCACAGAATGGACAGCCAAGACAGGAGACCATaGCTGAGACGGAGAGAGACTGAGCCACAAGGGCATCAGATCCAT +
Preference number: 6 (lower is better)
Translates to: QHPSCHRMDSQDRRP*LRRRETEPQGHQIH
Trigger: ATGGATCTGATGCCCTTGTGGCTCAGTCTCTCTCCGTCTCAGCAATGGTCTCCTGTCTTGGCTGTCCATTCTGTGGCATGATGGATGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS CAA 90 bp CTCAACTGCACATTTGCCAACATTTTACCAGGCACTGGCTGGCCTTaGGCTTCAGACAGTCTCAGATTCCTGTCCCACCTCCACTGTGGG +
Preference number: 6 (lower is better)
Translates to: LNCTFANILPGTGWP*ASDSLRFLSHLHCG
Trigger: CCCACAGTGGAGGTGGGACAGGAATCTGAGACTGTCTGAAGCCAAAGGCCAGCCAGTGCCTGGTAAAATGTTGGCAAATGTGCAGTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS TCA 72 bp CTCCGCACCCAGCATCCCAGCCTAGCACACCAAGCTTaGACACATATCTGCGGATGTAGATGTTGTAGACAC +
Preference number: 6 (lower is better)
Translates to: LRTQHPSLAHQA*THICGCRCCRH
Trigger: GTGTCTACAACATCTACATCCGCAGATATGTGTTCAAGCTTGGTGTGCTAGGCTGGGATGCTGGGTGCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394361.8
CDS GCA 72 bp AGAGGGAAAGGAAGTCTGGCTCTCCAGCATCCATCATaGCACAGAATGGACAGCCAAGACAGGAGACCATTG +
Preference number: 6 (lower is better)
Translates to: RGKGSLALQHPS*HRMDSQDRRPL
Trigger: CAATGGTCTCCTGTCTTGGCTGTCCATTCTGTGGCATGATGGATGCTGGAGAGCCAGACTTCCTTTCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS CCA 72 bp TCATCCACAGACAACCCTAATGCCAAGCCACGTGGGTaGAGAAGTGGAGGAAATGACACAGGTAGTCACGGA +
Preference number: 6 (lower is better)
Translates to: SSTDNPNAKPRG*RSGGNDTGSHG
Trigger: TCCGTGACTACCTGTGTCATTTCCTCCACTTCTCCACCCACGTGGCTTGGCATTAGGGTTGTCTGTGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS CCA 72 bp CATTTGCCAACATTTTACCAGGCACTGGCTGGCCTTTaGCTTCAGACAGTCTCAGATTCCTGTCCCACCTCC +
Preference number: 6 (lower is better)
Translates to: HLPTFYQALAGL*LQTVSDSCPTS
Trigger: GGAGGTGGGACAGGAATCTGAGACTGTCTGAAGCCAAAGGCCAGCCAGTGCCTGGTAAAATGTTGGCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS GCA 72 bp AATTGCCCCTCCTTCCAAAAGCACAGATCTCTACATTaGCCCAGATGTGGAGCTGCCAACCAGAAAGGGAAG +
Preference number: 6 (lower is better)
Translates to: NCPSFQKHRSLH*PRCGAANQKGK
Trigger: CTTCCCTTTCTGGTTGGCAGCTCCACATCTGGGGCAATGTAGAGATCTGTGCTTTTGGAAGGAGGGGCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340339.4
CDS GCA 72 bp GTGGGCTCTCAGAGTGACCCAGGCAAGACACCAAGTTaGTCTGAGCCTCAGTTTAGTCATCTACAGAATAGG +
Preference number: 6 (lower is better)
Translates to: VGSQSDPGKTPS*SEPQFSHLQNR
Trigger: CCTATTCTGTAGATGACTAAACTGAGGCTCAGAGCAACTTGGTGTCTTGCCTGGGTCACTCTGAGAGCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS CCA 72 bp ATGTTCAGGAGCAGCACGGAGGCATGCAGGTTCATGTaGATGCGTGTTAAGGAGTCACTCTGCTTCCTGAAA +
Preference number: 6 (lower is better)
Translates to: MFRSSTEACRFM*MRVKESLCFLK
Trigger: TTTCAGGAAGCAGAGTGACTCCTTAACACGCATCCACATGAACCTGCATGCCTCCGTGCTGCTCCTGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340339.4
ENST00000349457.8
ENST00000394361.8
ENST00000564607.1
CDS CAA 72 bp ACATTTGCCAACATTTTACCAGGCACTGGCTGGCCTTaGGCTTCAGACAGTCTCAGATTCCTGTCCCACCTC +
Preference number: 6 (lower is better)
Translates to: TFANILPGTGWP*ASDSLRFLSHL
Trigger: GAGGTGGGACAGGAATCTGAGACTGTCTGAAGCCAAAGGCCAGCCAGTGCCTGGTAAAATGTTGGCAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS CCA 72 bp AACTGCACATTTGCCAACATTTTACCAGGCACTGGCTaGCCTTTGGCTTCAGACAGTCTCAGATTCCTGTCC +
Preference number: 6 (lower is better)
Translates to: NCTFANILPGTG*PLASDSLRFLS
Trigger: GGACAGGAATCTGAGACTGTCTGAAGCCAAAGGCCAGCCAGTGCCTGGTAAAATGTTGGCAAATGTGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS TCA 72 bp CAGGTGGAGGGAACCATAGTGGCAAAAGCCCAGAGCTaGAAGGAAAGGATGATGGTGAAATTTAGAGTGCAG +
Preference number: 6 (lower is better)
Translates to: QVEGTIVAKAQS*KERMMVKFRVQ
Trigger: CTGCACTCTAAATTTCACCATCATCCTTTCCTTTCAGCTCTGGGCTTTTGCCACTATGGTTCCCTCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS CCA 72 bp ACTCAACTGCACATTTGCCAACATTTTACCAGGCACTaGCTGGCCTTTGGCTTCAGACAGTCTCAGATTCCT +
Preference number: 6 (lower is better)
Translates to: TQLHICQHFTRH*LAFGFRQSQIP
Trigger: AGGAATCTGAGACTGTCTGAAGCCAAAGGCCAGCCAGTGCCTGGTAAAATGTTGGCAAATGTGCAGTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS TCA 72 bp AACAATGGTGGAAAAACAAAGGGCAACACGGAATCTTaGGTGTCCAGCTCTGGCCTTTTATACAGTAGGCGC +
Preference number: 6 (lower is better)
Translates to: NNGGKTKGNTES*VSSSGLLYSRR
Trigger: GCGCCTACTGTATAAAAGGCCAGAGCTGGACACTCAAGATTCCGTGTTGCCCTTTGTTTTTCCACCATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS GCA 72 bp GACATTTCATGGATGTGTGCCAATCAGTTCCCTCTGTaGTCAAGCTGGCTTGAAGTGGTCTTTTCTTACTTG +
Preference number: 6 (lower is better)
Translates to: DISWMCANQFPL*SSWLEVVFSYL
Trigger: CAAGTAAGAAAAGACCACTTCAAGCCAGCTTGAGCACAGAGGGAACTGATTGGCACACATCCATGAAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564607.1
CDS CCA 72 bp TACAGAATAGGATCATTCGTACCCATGTTACAACAATaGTGGAAAAACAAAGGGCAACACGGAATCTTGAGT +
Preference number: 6 (lower is better)
Translates to: YRIGSFVPMLQQ*WKNKGQHGILS
Trigger: ACTCAAGATTCCGTGTTGCCCTTTGTTTTTCCACCATTGTTGTAACATGGGTACGAATGATCCTATTCTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564607.1