RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRG4 (Homo sapiens)

Ensembl gene IDs: ENSG00000156920

Ensembl transcript IDs: ENST00000370652.5, ENST00000394141.1, ENST00000394143.6

Found 893 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTaGGATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAA +
Preference number: 1 (lower is better)
Translates to: QVAFGYMSTLFSGDL*DFGAPITRASIHLE
Trigger: TTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
3UTR TCA 72 bp TTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTaGGATTTTGGTGCACCCATCACCCGAGCAAGTATA +
Preference number: 3 (lower is better)
Translates to: FGYMSTLFSGDL*DFGAPITRASI
Trigger: TATACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTACTCATGTAACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAGACCTGTCCCCAACGTaGGGTCACACAGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPDLSPT*GHTAWE
Trigger: CTCCCAGGCTGTGTGACCCCACGTTGGGGACAGGTC...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGGGGTTGCTGAGGAATaGGCAGCTGTAGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVGVAEE*AAVGCG
Trigger: TCCACAGCCTACAGCTGCTCATTCCTCAGCAACCCC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTCAGCAGAGGTGTATCTaGCACTGCTCCCGCACACTC +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGQQRCI*HCSRTL
Trigger: GAGTGTGCGGGAGCAGTGGCAGATACACCTCTGCTG...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGCAGCAGAGGTGTATCTaGCACTGCTCCCGCACACTC +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRQQRCI*HCSRTL
Trigger: GAGTGTGCGGGAGCAGTGGCAGATACACCTCTGCTG...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAAGGCACAGGGGTTGCTaGGGAATGAGCAGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPRHRGC*GMSSCR
Trigger: CCTACAGCTGCTCATTCCTCAGCAACCCCTGTGCCT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGGGCACCAGAAAGAATTaGTGGGAGTGTGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRGTRKN*WECGPR
Trigger: CCTGGGACCACACTCCCATCAATTCTTTCTGGTGCC...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGGGCATTAGATACAGTTaGCGGAGGGGAGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRGIRYS*RRGARR
Trigger: CCTTCTGGCTCCCCTCCGGCAACTGTATCTAATGCC...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAAGGTGTATCTGCCACTaGTCCCGCACACTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQRCICH*SRTLSF
Trigger: GAAGGAGAGTGTGCGGGAGCAGTGGCAGATACACCT...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTAGGTGTATCTGCCACTaGTCCCGCACACTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGRCICH*SRTLSF
Trigger: GAAGGAGAGTGTGCGGGAGCAGTGGCAGATACACCT...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAACAGCAGGGCCTGGTCTaGCCTAGAAGTCCAAATGGT +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQQQGLV*PRSPNG
Trigger: ACCATTTGGACTTCTAGGCCAGACCAGGCCCTGCTG...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAAGGGTAGAGTTGCACTaGATGGGGTCCATGGAGGGT +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQRVELH*MGSMEG
Trigger: ACCCTCCATGGACCCCATCCAGTGCAACTCTACCCT...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTAGGGTAGAGTTGCACTaGATGGGGTCCATGGAGGGT +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGRVELH*MGSMEG
Trigger: ACCCTCCATGGACCCCATCCAGTGCAACTCTACCCT...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATAGGCACAGGGGTTGCTaGGGAATGAGCAGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYRHRGC*GMSSCR
Trigger: CCTACAGCTGCTCATTCCTCAGCAACCCCTGTGCCT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTCAGGGGGAGGTTTTaGGCAGACAAGAGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQVRGRF*ADKSVC
Trigger: ACACACACTCTTGTCTGCTCAAAACCTCCCCCTGAC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGTAGTTGAGATCACATaGGTGGAGGACGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHVVEIT*VEDAGG
Trigger: TCCTCCTGCGTCCTCCACTCATGTGATCTCAACTAC...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTCAGTCTGAGAGGCTGTaGATGTTGACAAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGQSERL*MLTKAQ
Trigger: CTGGGCCTTTGTCAACATTCACAGCCTCTCAGACTG...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTCACCCCAGTGGATATaGGTGGAAATGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGSPQWI*VEMRLQ
Trigger: CTGGAGCCTCATTTCCACTCATATCCACTGGGGTGA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAATCACCCCAGTGGATATaGGTGGAAATGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQSPQWI*VEMRLQ
Trigger: CTGGAGCCTCATTTCCACTCATATCCACTGGGGTGA...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGAGGTTCCAGCACCACTaGTTCTGTCAAGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRRFQHH*FCQGLH
Trigger: GTGGAGTCCTTGACAGAAGCAGTGGTGCTGGAACCT...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR GCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGTCCTGGGAGTATATaGTGGAAGGGCACTCGTGCT +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHSPGSI*WKGTRA
Trigger: AGCACGAGTGCCCTTCCAGCATATACTCCCAGGACT...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGTGCCTTTGAGGTCATaGAGGATCATCTTCCGCCGA +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVVPLRS*RIIFRR
Trigger: TCGGCGGAAGATGATCCTGCATGACCTCAAAGGCAC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAAGGTGTATCTGCCACTaGTCCCGCACACTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPRCICH*SRTLSF
Trigger: GAAGGAGAGTGTGCGGGAGCAGTGGCAGATACACCT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTACATCAGTTGTGGATGTaGGACCTGACTCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVHQLWM*DLTQVP
Trigger: AGGCACCTGAGTCAGGTCCCACATCCACAACTGATG...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTCCTGGGAGTATATGCTaGAAGGGCACTCGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGPGSIC*KGTRAF
Trigger: GAAAGCACGAGTGCCCTTCCAGCATATACTCCCAGG...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGCCTGGGAGTATATGCTaGAAGGGCACTCGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRPGSIC*KGTRAF
Trigger: GAAAGCACGAGTGCCCTTCCAGCATATACTCCCAGG...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGCTCTTAGAACTGAGTaGAGAGAAGGCAGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHALRTE*REGSGA
Trigger: GGCACCACTGCCTTCTCTCCACTCAGTTCTAAGAGC...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGAGAGCCAAATACATGTaGACTGCCTCCAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRRAKYM*TASRPI
Trigger: GATGGGCCTGGAGGCAGTCCACATGTATTTGGCTCT...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGGGGTCACACAGCCTaGGAGGGCTTCAACGGGTAT +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIWGHTA*EGFNGY
Trigger: ATACCCGTTGAAGCCCTCCCAGGCTGTGTGACCCCA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394143.6
CDS-3UTR TCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACCGCTGCTCTCATTCTTaGGAAAGTGCCCTAGGAACA +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHRCSHS*ESALGT
Trigger: TGTTCCTAGGGCACTTTCTCAAGAATGAGAGCAGCG...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGATGCAGTCCCAACATaGGTAGATGCAGGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVDAVPT*VDAGEV
Trigger: GACTTCACCTGCATCTACTCATGTTGGGACTGCATC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGTGGATGTGGGACCTaGCTCAGGTGCCTTGGATGT +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFICGCGT*LRCLGC
Trigger: ACATCCAAGGCACCTGAGTCAGGTCCCACATCCACA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACTGTCACCCTTTGTGCTaGTTCGTCTGTCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHCHPLC*FVCHFQ
Trigger: CTGGAAGTGACAGACGAATCAGCACAAAGGGTGACA...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAAGTGGGAGATCCAGCTaGAATTCCCTCAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVSGRSS*NSLRCL
Trigger: GAGACATCTGAGGGAATTTCAGCTGGATCTCCCACT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGGGGTTGCTGAGGAATaGGCAGCTGTAGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLGVAEE*AAVGCG
Trigger: TCCACAGCCTACAGCTGCTCATTCCTCAGCAACCCC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGATTGGCAGAGATGTGTaGGGGTGTGGTCTCATCAAC +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRIGRDV*GCGLIN
Trigger: GTTGATGAGACCACACCCTCACACATCTCTGCCAAT...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAACCCAAGTGGAATCTCTaGAGGCGAATGTGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQPKWNL*RRMCLV
Trigger: CACCAAACACATTCGCCTTCAGAGATTCCACTTGGG...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACCCCAAGTGGAATCTCTaGAGGCGAATGTGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHPKWNL*RRMCLV
Trigger: CACCAAACACATTCGCCTTCAGAGATTCCACTTGGG...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGGATATGAGTGGAAATaGGGCTCCAGGAACAGTGGA +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQGYEWK*GSRNSG
Trigger: TCCACTGTTCCTGGAGCCTCATTTCCACTCATATCC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAAGACTCCAAAATGGGTaGGGTGGTCACACTGACAGA +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVRLQNG*GGHTDR
Trigger: TCTGTCAGTGTGACCACCTCACCCATTTTGGAGTCT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTAGACTCCAAAATGGGTaGGGTGGTCACACTGACAGA +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGRLQNG*GGHTDR
Trigger: TCTGTCAGTGTGACCACCTCACCCATTTTGGAGTCT...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTGCCACTGCAGCTGTaGTACAAACTCCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQVPLQL*YKLPLS
Trigger: AGAAAGTGGGAGTTTGTATCACAGCTGCAGTGGCAC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGGGCTCATTGTGCCTTTaGGGTCATGCAGGATCATCT +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRGSLCL*GHAGSS
Trigger: AGATGATCCTGCATGACCTCAAAGGCACAATGAGCC...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACTATCCAACCTTTATCTaGCACCGGCTGCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHYPTFI*HRLLPS
Trigger: TGATGGGAGCAGCCGGTGTCAGATAAAGGTTGGATA...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGGAGCTAGTTGCAGTTaGCTTGAGAGATGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVGASCS*LERWRQ
Trigger: TTGACGCCATCTCTCAAGTCAACTGCAACTAGCTCC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAAGGTTCCAGCACCACTaGTTCTGTCAAGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPRFQHH*FCQGLH
Trigger: GTGGAGTCCTTGACAGAAGCAGTGGTGCTGGAACCT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR GCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGCTGCTGATGGTCTCCTaGAAGTCCAAGGTCTATGTC +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRLLMVS*KSKVYV
Trigger: GACATAGACCTTGGACTTGCAGGAGACCATCAGCAG...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR GCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACTGGCAGTGGTACCTTTaGCCTCTGGAGATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHWQWYL*PLEMLS
Trigger: TGAAAGCATCTCCAGAGGGCAAAGGTACCACTGCCA...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGGCAGTGGTACCTTTaGCCTCTGGAGATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRWQWYL*PLEMLS
Trigger: TGAAAGCATCTCCAGAGGGCAAAGGTACCACTGCCA...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAAGTCCTGGGAGTATATaGTGGAAGGGCACTCGTGCT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPSPGSI*WKGTRA
Trigger: AGCACGAGTGCCCTTCCAGCATATACTCCCAGGACT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGGCATTAGATACAGTTaGCGGAGGGGAGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIGIRYS*RRGARR
Trigger: CCTTCTGGCTCCCCTCCGGCAACTGTATCTAATGCC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTACACACTGACTGTGATTaGCACCATGATAGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVHTDCD*HHDSRD
Trigger: ATCCCGGCTATCATGGTGGCAATCACAGTCAGTGTG...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCAGCAGAGGTGTATCTaGCACTGCTCCCGCACACTC +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFQQRCI*HCSRTL
Trigger: GAGTGTGCGGGAGCAGTGGCAGATACACCTCTGCTG...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGATTCAATGAACTCCTaGCCAGCTGTGGAGATAGGG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVDSMNS*PAVEIG
Trigger: CCCTATCTCCACAGCTGGCCAGGAGTTCATTGAATC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGGATTCAATGAACTCCTaGCCAGCTGTGGAGATAGGG +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRDSMNS*PAVEIG
Trigger: CCCTATCTCCACAGCTGGCCAGGAGTTCATTGAATC...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATGTTTCAGCTGTCCTTaGGGCAGGTGTGGTCTCAAT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVCFSCP*GRCGLN
Trigger: ATTGAGACCACACCTGCCCCAAGGACAGCTGAAACA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACATCAGTTGTGGATGTaGGACCTGACTCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPHQLWM*DLTQVP
Trigger: AGGCACCTGAGTCAGGTCCCACATCCACAACTGATG...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTACAGCTTCATCAGTTGTaGATGTGGGACCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVQLHQL*MWDLTQ
Trigger: CTGAGTCAGGTCCCACATCCACAACTGATGAAGCTG...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACCAGCTTCATCAGTTGTaGATGTGGGACCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHQLHQL*MWDLTQ
Trigger: CTGAGTCAGGTCCCACATCCACAACTGATGAAGCTG...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATCAGCAGGGCCTGGTCTaGCCTAGAAGTCCAAATGGT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYQQGLV*PRSPNG
Trigger: ACCATTTGGACTTCTAGGCCAGACCAGGCCCTGCTG...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGTGTGCTCCCAGAAGTaGGAGATCCAGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGVCSQK*EIQLKF
Trigger: GAATTTCAGCTGGATCTCCCACTTCTGGGAGCACAC...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGGTGTGCTCCCAGAAGTaGGAGATCCAGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRVCSQK*EIQLKF
Trigger: GAATTTCAGCTGGATCTCCCACTTCTGGGAGCACAC...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGCCGTGGCCTCTGAAGTaGTACGAATCAAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRPWPLK*YESSLH
Trigger: ATGGAGACTTGATTCGTACCACTTCAGAGGCCACGG...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGTGCTAGTCACCAACTaGATGGACACTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVVLVTN*MDTGVC
Trigger: ACACACACCAGTGTCCATCCAGTTGGTGACTAGCAC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGTGCTAGTCACCAACTaGATGGACACTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGVLVTN*MDTGVC
Trigger: ACACACACCAGTGTCCATCCAGTTGGTGACTAGCAC...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTGGAGAGAAGGCAGTaGTGCCTACAAATGGAGTCA +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQVERRQ*CLQMES
Trigger: TGACTCCATTTGTAGGCACCACTGCCTTCTCTCCAC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGTGGAGAGAAGGCAGTaGTGCCTACAAATGGAGTCA +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVVERRQ*CLQMES
Trigger: TGACTCCATTTGTAGGCACCACTGCCTTCTCTCCAC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAGCTCTTAGAACTGAGTaGAGAGAAGGCAGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPALRTE*REGSGA
Trigger: GGCACCACTGCCTTCTCTCCACTCAGTTCTAAGAGC...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATAGGGTAGAGTTGCACTaGATGGGGTCCATGGAGGGT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYRVELH*MGSMEG
Trigger: ACCCTCCATGGACCCCATCCAGTGCAACTCTACCCT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTCAGTTATTGTGGTTCTaGAGGATGCCTCAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGQLLWF*RMPQGV
Trigger: CACACCCTGAGGCATCCTCCAGAACCACAATAACTG...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTACAGTTATTGTGGTTCTaGAGGATGCCTCAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVQLLWF*RMPQGV
Trigger: CACACCCTGAGGCATCCTCCAGAACCACAATAACTG...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACCAGTTATTGTGGTTCTaGAGGATGCCTCAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHQLLWF*RMPQGV
Trigger: CACACCCTGAGGCATCCTCCAGAACCACAATAACTG...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAACACAGTCCTGGGGTTaGCAGTTATTGTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVTQSWG*QLLWFW
Trigger: CCAGAACCACAATAACTGCCAACCCCAGGACTGTGT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACACACAGTCCTGGGGTTaGCAGTTATTGTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHTQSWG*QLLWFW
Trigger: CCAGAACCACAATAACTGCCAACCCCAGGACTGTGT...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGATGAGACACAGTCCTaGGGTTGGCAGTTATTGTGG +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQDETQS*GWQLLW
Trigger: CCACAATAACTGCCAACCCCAGGACTGTGTCTCATC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGATGAGACACAGTCCTaGGGTTGGCAGTTATTGTGG +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGDETQS*GWQLLW
Trigger: CCACAATAACTGCCAACCCCAGGACTGTGTCTCATC...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGTATGCCATTGAAATaGAGCCAGGTGGTGACGGAT +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRCMPLK*SQVVTD
Trigger: ATCCGTCACCACCTGGCTTCATTTCAATGGCATACA...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTAGGAACAGAGTCCCATaGGGTGTCAGGTTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIRNRVP*GVRLCG
Trigger: ACCACACAACCTGACACCTCATGGGACTCTGTTCCT...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTGTGGATGTGGGACCTaGCTCAGGTGCCTTGGATGT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLCGCGT*LRCLGC
Trigger: ACATCCAAGGCACCTGAGTCAGGTCCCACATCCACA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAATCTTTGTGTTGTTGCTaGCTTTGGTACAGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQSLCCC*LWYRGR
Trigger: ACGACCCCTGTACCAAAGTCAGCAACAACACAAAGA...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGTTGTGGAAGCAGTCTaGTCCAAAGGTGGTACCAAT +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGVVEAV*SKGGTN
Trigger: ATTGGTACCACCTTTGGATCAGACTGCTTCCACAAC...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATCCATGGATGTCTTCCTaGCAGAGATTACCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYPWMSS*QRLPWP
Trigger: AGGCCACGGTAATCTCTGTCAGGAAGACATCCATGG...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTCCATGGATGTCTTCCTaGCAGAGATTACCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIPWMSS*QRLPWP
Trigger: AGGCCACGGTAATCTCTGTCAGGAAGACATCCATGG...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGTCAGGGGGAGGTTTTaGGCAGACAAGAGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIVRGRF*ADKSVC
Trigger: ACACACACTCTTGTCTGCTCAAAACCTCCCCCTGAC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATGGTGTAGACGTAGTTaGGATCACATGAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVWCRRS*DHMSGG
Trigger: TCCTCCACTCATGTGATCTCAACTACGTCTACACCA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACCCAAGTGGAATCTCTaGAGGCGAATGTGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPPKWNL*RRMCLV
Trigger: CACCAAACACATTCGCCTTCAGAGATTCCACTTGGG...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATGGAATAAGTATCTGTaGGAGCTACCCCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVWNKYL*ELPLYH
Trigger: GTGGTACAGGGGTAGCTCTCACAGATACTTATTCCA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGGTCCATGGAGGGTATaGAACAGGGGTATTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQGPWRV*NRGIQR
Trigger: TCTTTGAATACCCCTGTTTCATACCCTCCATGGACC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGGTCCATGGAGGGTATaGAACAGGGGTATTCAAAGA +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGGPWRV*NRGIQR
Trigger: TCTTTGAATACCCCTGTTTCATACCCTCCATGGACC...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGTGGAAATTGGAAACTaGGAACCTTCAGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHVEIGN*EPSAVG
Trigger: ACCCACAGCTGAAGGTTCTCAGTTTCCAATTTCCAC...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGTGGAAATTGGAAACTaGGAACCTTCAGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVVEIGN*EPSAVG
Trigger: ACCCACAGCTGAAGGTTCTCAGTTTCCAATTTCCAC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATCAGTCTGAGAGGCTGTaGATGTTGACAAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYQSERL*MLTKAQ
Trigger: CTGGGCCTTTGTCAACATTCACAGCCTCTCAGACTG...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGATACTAGACCAGTCTaGGAGGCTGTGAATGTTGAC +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVDTRPV*EAVNVD
Trigger: GTCAACATTCACAGCCTCTCAGACTGGTCTAGTATC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGATACTAGACCAGTCTaGGAGGCTGTGAATGTTGAC +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQDTRPV*EAVNVD
Trigger: GTCAACATTCACAGCCTCTCAGACTGGTCTAGTATC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTAGTGAATGGGTGCGCTaGTATCATGTCAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGSEWVR*YHVRCQ
Trigger: CTGACATCTGACATGATATCAGCGCACCCATTCACT...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAAGTGAATGGGTGCGCTaGTATCATGTCAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVSEWVR*YHVRCQ
Trigger: CTGACATCTGACATGATATCAGCGCACCCATTCACT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACCTTTCTGCTGAAGGATaGAGGATGAGACACAGTCCT +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHLSAEG*RMRHSP
Trigger: AGGACTGTGTCTCATCCTTCATCCTTCAGCAGAAAG...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAACTTTCTGCTGAAGGATaGAGGATGAGACACAGTCCT +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQLSAEG*RMRHSP
Trigger: AGGACTGTGTCTCATCCTTCATCCTTCAGCAGAAAG...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGCTTTCTGCTGAAGGATaGAGGATGAGACACAGTCCT +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRLSAEG*RMRHSP
Trigger: AGGACTGTGTCTCATCCTTCATCCTTCAGCAGAAAG...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAACATAGGAGTGAATGCTaGAAGCCATGCCATCAAACG +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQHRSEC*KPCHQT
Trigger: CGTTTGATGGCATGGCTTTCAGCATTCACTCCTATG...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACCTTTACTTTACAGCCTaGCGAATTCCATCCACCCAG +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHLYFTA*RIPSTQ
Trigger: CTGGGTGGATGGAATTCGTCAGGCTGTAAAGTAAAG...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGTGCTGTGCACAGGTTaGTCAGAATTTTGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGVLCTG*SEFWQD
Trigger: ATCCTGCCAAAATTCTGATCAACCTGTGCACAGCAC...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAGGAGCTAGTTGCAGTTaGCTTGAGAGATGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPGASCS*LERWRQ
Trigger: TTGACGCCATCTCTCAAGTCAACTGCAACTAGCTCC...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGTCAAGGACTCCACTaGTTCTTCTTTCCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRCQGLH*FFFPVG
Trigger: GCCTACTGGAAAGAAGAAGCAGTGGAGTCCTTGACA...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR GCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAACACCGAATATATGTGTaGTCCCAGAAGTGGGAGATC +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQHRIYV*SQKWEI
Trigger: GATCTCCCACTTCTGGGAGCACACATATATTCGGTG...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATAGTCCTGGGAGTATATaGTGGAAGGGCACTCGTGCT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYSPGSI*WKGTRA
Trigger: AGCACGAGTGCCCTTCCAGCATATACTCCCAGGACT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGAGAGAAGGCAGTGGTaGCTACAAATGGAGTCACTA +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQERRQW*LQMESL
Trigger: TAGTGACTCCATTTGTAGGCACCACTGCCTTCTCTC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGAGAGAAGGCAGTGGTaGCTACAAATGGAGTCACTA +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGERRQW*LQMESL
Trigger: TAGTGACTCCATTTGTAGGCACCACTGCCTTCTCTC...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGGCATTAGATACAGTTaGCGGAGGGGAGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFGIRYS*RRGARR
Trigger: CCTTCTGGCTCCCCTCCGGCAACTGTATCTAATGCC...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATGTGGTTCTGGAGGATaGCTCAGGGTGTGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPCGSGG*LRVCGN
Trigger: ATTTCCACACACCCTGAGGCATCCTCCAGAACCACA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAAATACATGTGGACTaGCTCCAGGCCCATCCAAGT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPQIHVD*LQAHPS
Trigger: ACTTGGATGGGCCTGGAGGCAGTCCACATGTATTTG...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAAGGTGTCAGGTTGTGTaGTTGATCCGTTACTTCCAG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVRCQVV*LIRYFQ
Trigger: CTGGAAGTAACGGATCAACCACACAACCTGACACCT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATGTTTCAGCTGTCCTTaGGGCAGGTGTGGTCTCAAT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPCFSCP*GRCGLN
Trigger: ATTGAGACCACACCTGCCCCAAGGACAGCTGAAACA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATTGCTGGAGAACAGATaGGCAGCTTCATCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVLLENR*AASSVV
Trigger: CACAACTGATGAAGCTGCCCATCTGTTCTCCAGCAA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTTGCTGGAGAACAGATaGGCAGCTTCATCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGLLENR*AASSVV
Trigger: CACAACTGATGAAGCTGCCCATCTGTTCTCCAGCAA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGCAGCAGGGCCTGGTCTaGCCTAGAAGTCCAAATGGT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLQQGLV*PRSPNG
Trigger: ACCATTTGGACTTCTAGGCCAGACCAGGCCCTGCTG...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACCGTGGCCTCTGAAGTaGTACGAATCAAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPPWPLK*YESSLH
Trigger: ATGGAGACTTGATTCGTACCACTTCAGAGGCCACGG...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATTGAGATCACATGAGTaGAGGACGCAGGAGGAATGT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVLRSHE*RTQEEC
Trigger: ACATTCCTCCTGCGTCCTCCACTCATGTGATCTCAA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAATTGAGATCACATGAGTaGAGGACGCAGGAGGAATGT +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQLRSHE*RTQEEC
Trigger: ACATTCCTCCTGCGTCCTCCACTCATGTGATCTCAA...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGAGATGTGTGAGGGTGTaGTCTCATCAACAACAGAGG +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRRCVRV*SHQQQR
Trigger: CCTCTGTTGTTGATGAGACCACACCCTCACACATCT...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAAGATGTGTGAGGGTGTaGTCTCATCAACAACAGAGG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVRCVRV*SHQQQR
Trigger: CCTCTGTTGTTGATGAGACCACACCCTCACACATCT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATCATTTCCACAGTCCTaGGAGTATATGCTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVSFPQS*EYMLEG
Trigger: CCCTTCCAGCATATACTCCCAGGACTGTGGAAATGA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGAGGAGAGGTCTTTaGAGTAGAGATCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHRRRGL*SRDLSF
Trigger: GAAGCTGAGATCTCTACTCCAAAGACCTCTCCTCCT...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTAGGAGGAGAGGTCTTTaGAGTAGAGATCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGRRRGL*SRDLSF
Trigger: GAAGCTGAGATCTCTACTCCAAAGACCTCTCCTCCT...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGGGAAATTCAACCATTTaGGATGTGGGAGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRGNSTI*DVGGGE
Trigger: CTCTCCTCCTCCCACATCCCAAATGGTTGAATTTCC...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGAGAACCTTCAGCTGTaGGTATGTTCCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHENLQL*VCSRKS
Trigger: TGACTTCCTGGAACATACCCACAGCTGAAGGTTCTC...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGAATTGATGGGAGTGTaGTCCCAGGAGTTACAGATG +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHELMGV*SQELQM
Trigger: CATCTGTAACTCCTGGGACCACACTCCCATCAATTC...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACCATAGGGAGAGAAGTTaGGAAGCCAGTAGTGATACC +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHHRERS*EASSDT
Trigger: GGTATCACTACTGGCTTCCCAACTTCTCTCCCTATG...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAACATAGGGAGAGAAGTTaGGAAGCCAGTAGTGATACC +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQHRERS*EASSDT
Trigger: GGTATCACTACTGGCTTCCCAACTTCTCTCCCTATG...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAATTTATGCATCTGGTTTaGGCTGTCTCCGTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQFMHLV*AVSVGL
Trigger: CAACCCTACGGAGACAGCCCAAACCAGATGCATAAA...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAACAACTCCCAGAAAAATaGAGGAGATTCCACATCCGG +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQQLPEK*RRFHIR
Trigger: CCGGATGTGGAATCTCCTCCATTTTTCTGGGAGTTG...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTACAACTCCCAGAAAAATaGAGGAGATTCCACATCCGG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVQLPEK*RRFHIR
Trigger: CCGGATGTGGAATCTCCTCCATTTTTCTGGGAGTTG...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGCAACTCCCAGAAAAATaGAGGAGATTCCACATCCGG +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRQLPEK*RRFHIR
Trigger: CCGGATGTGGAATCTCCTCCATTTTTCTGGGAGTTG...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATAGAGCCAAATACATGTaGACTGCCTCCAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYRAKYM*TASRPI
Trigger: GATGGGCCTGGAGGCAGTCCACATGTATTTGGCTCT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTCCCCAATCAGGGGTTaGGAGGAGGCAAGTATCTCT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYSPIRG*EEASIS
Trigger: AGAGATACTTGCCTCCTCCCAACCCCTGATTGGGGA...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCCCAATCAGGGGTTaGGAGGAGGCAAGTATCTCT +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFISPIRG*EEASIS
Trigger: AGAGATACTTGCCTCCTCCCAACCCCTGATTGGGGA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGAGGAACAGAGTCCCATaGGGTGTCAGGTTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLRNRVP*GVRLCG
Trigger: ACCACACAACCTGACACCTCATGGGACTCTGTTCCT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGAAGGTGTAGGTGGTTaGAAGATTTCAGTAGCCATG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVEGVGG*KISVAM
Trigger: CATGGCTACTGAAATCTTTCAACCACCTACACCTTC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGATGCAGTCCCAACATaGGTAGATGCAGGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYDAVPT*VDAGEV
Trigger: GACTTCACCTGCATCTACTCATGTTGGGACTGCATC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGATGCAGTCCCAACATaGGTAGATGCAGGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIDAVPT*VDAGEV
Trigger: GACTTCACCTGCATCTACTCATGTTGGGACTGCATC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATCCCTCAGATGTCTCTaGAGTCCAATGTGCTACATA +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVSLRCL*SPMCYI
Trigger: TATGTAGCACATTGGACTTCAGAGACATCTGAGGGA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATAGTGGGAGATCCAGCTaGAATTCCCTCAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYSGRSS*NSLRCL
Trigger: GAGACATCTGAGGGAATTTCAGCTGGATCTCCCACT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGGAGAAACTGGTTTCTaGTATCCTTGTGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGGETGF*YPCGRS
Trigger: GCTTCTACCACAAGGATATCAGAAACCAGTTTCTCC...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGCCATGGATGTCTTCCTaGCAGAGATTACCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLPWMSS*QRLPWP
Trigger: AGGCCACGGTAATCTCTGTCAGGAAGACATCCATGG...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGGGTTACTGTATCAACTaGGGTAGAGAAAAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRGYCIN*GREKGG
Trigger: ACCACCCTTTTCTCTACCTCAGTTGATACAGTAACC...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGTCAGGGGGAGGTTTTaGGCAGACAAGAGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLVRGRF*ADKSVC
Trigger: ACACACACTCTTGTCTGCTCAAAACCTCCCCCTGAC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGTAGTTGAGATCACATaGGTGGAGGACGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFVVEIT*VEDAGG
Trigger: TCCTCCTGCGTCCTCCACTCATGTGATCTCAACTAC...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGTAGTTGAGATCACATaGGTGGAGGACGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLVVEIT*VEDAGG
Trigger: TCCTCCTGCGTCCTCCACTCATGTGATCTCAACTAC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATGGTGTAGACGTAGTTaGGATCACATGAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPWCRRS*DHMSGG
Trigger: TCCTCCACTCATGTGATCTCAACTACGTCTACACCA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATATTGGCAGAGATGTGTaGGGGTGTGGTCTCATCAAC +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYIGRDV*GCGLIN
Trigger: GTTGATGAGACCACACCCTCACACATCTCTGCCAAT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGGGCGAATGTGTTTGGTaGCTGGAAATTTTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRGECVW*LEIFVV
Trigger: GACCACAAAAATTTCCAGTCACCAAACACATTCGCC...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAAGTATCCTGGCCATATaGGACAGAGTGAGTCACATA +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQSILAI*DRVSHI
Trigger: TATGTGACTCACTCTGTCTCATATGGCCAGGATACT...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGCAGTCTGAGAGGCTGTaGATGTTGACAAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLQSERL*MLTKAQ
Trigger: CTGGGCCTTTGTCAACATTCACAGCCTCTCAGACTG...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGGATATGAGTGGAAATaGGGCTCCAGGAACAGTGGA +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIGYEWK*GSRNSG
Trigger: TCCACTGTTCCTGGAGCCTCATTTCCACTCATATCC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGGATATGAGTGGAAATaGGGCTCCAGGAACAGTGGA +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYGYEWK*GSRNSG
Trigger: TCCACTGTTCCTGGAGCCTCATTTCCACTCATATCC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTCACCCCAGTGGATATaGGTGGAAATGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFSPQWI*VEMRLQ
Trigger: CTGGAGCCTCATTTCCACTCATATCCACTGGGGTGA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGGCTCATTGTGCCTTTaGGGTCATGCAGGATCATCT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYGSLCL*GHAGSS
Trigger: AGATGATCCTGCATGACCTCAAAGGCACAATGAGCC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAATGGAAAGCTTATTTCTaGAGGTGTGCCTTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQWKAYF*RCALCR
Trigger: TCTGCACAAGGCACACCTTCAGAAATAAGCTTTCCA...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGGAAAGCTTATTTCTaGAGGTGTGCCTTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRWKAYF*RCALCR
Trigger: TCTGCACAAGGCACACCTTCAGAAATAAGCTTTCCA...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGCTTCCCACCCTCAAATaGCCAGATCTTGTCTCTAAA +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRLPTLK*PDLVSK
Trigger: TTTAGAGACAAGATCTGGTCATTTGAGGGTGGGAAG...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394141.1
CDS-3UTR GCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATGTCAAGGACTCCACTaGTTCTTCTTTCCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPCQGLH*FFFPVG
Trigger: GCCTACTGGAAAGAAGAAGCAGTGGAGTCCTTGACA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR GCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGTGGAGATAGGGAGTaGCCCAGTATTTGTGGATTT +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRCGDRE*PSICGF
Trigger: AAATCCACAAATACTGGGGCACTCCCTATCTCCACA...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTGTGGAGATAGGGAGTaGCCCAGTATTTGTGGATTT +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGCGDRE*PSICGF
Trigger: AAATCCACAAATACTGGGGCACTCCCTATCTCCACA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATTTGCCCTCTGGAGATaGTTTCAGTGGGGTGATATT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVFALWR*FQWGDI
Trigger: AATATCACCCCACTGAAAGCATCTCCAGAGGGCAAA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACTTTGCCCTCTGGAGATaGTTTCAGTGGGGTGATATT +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHFALWR*FQWGDI
Trigger: AATATCACCCCACTGAAAGCATCTCCAGAGGGCAAA...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAAATAGGAGTGGACGTTaGCATAGAGGATTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVNRSGR*HRGFSR
Trigger: CCTAGAGAATCCTCTATGGCAACGTCCACTCCTATT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGTCAGAAGAGACTGTTaGAGGTGTGAAAGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHVRRDC*RCESRV
Trigger: AACTCTGCTTTCACACCTGCAACAGTCTCTTCTGAC...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGTCAGAAGAGACTGTTaGAGGTGTGAAAGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVVRRDC*RCESRV
Trigger: AACTCTGCTTTCACACCTGCAACAGTCTCTTCTGAC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATTTCCTCCAATATGCTaGAGAGTGATAACCACTGGG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVFPPIC*RVITTG
Trigger: CCCAGTGGTTATCACTCTGCAGCATATTGGAGGAAA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAATGAAGTGCCACTaGAGCTGTGATACAAACTCC +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQVMKCH*SCDTNS
Trigger: GGAGTTTGTATCACAGCTGCAGTGGCACTTCATTAC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGTAATGAAGTGCCACTaGAGCTGTGATACAAACTCC +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVVMKCH*SCDTNS
Trigger: GGAGTTTGTATCACAGCTGCAGTGGCACTTCATTAC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAACAGGAAGTAATGAAGTaGCACTGCAGCTGTGATACA +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQQEVMK*HCSCDT
Trigger: TGTATCACAGCTGCAGTGGCACTTCATTACTTCCTG...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGCAGGAAGTAATGAAGTaGCACTGCAGCTGTGATACA +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRQEVMK*HCSCDT
Trigger: TGTATCACAGCTGCAGTGGCACTTCATTACTTCCTG...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATCACACTGACTGTGATTaGCACCATGATAGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYHTDCD*HHDSRD
Trigger: ATCCCGGCTATCATGGTGGCAATCACAGTCAGTGTG...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAATTATCTGACACCGGCTaGTCCCATCAGAAGAGTTAT +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQLSDTG*SHQKSY
Trigger: ATAACTCTTCTGATGGGAGCAGCCGGTGTCAGATAA...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAAGGTGTCAGGTTGTGTaGTTGATCCGTTACTTCCAG +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPRCQVV*LIRYFQ
Trigger: CTGGAAGTAACGGATCAACCACACAACCTGACACCT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTCTATGGATATACTCTaGGTAGGCAGAGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRSMDIL*VGREMA
Trigger: AGCCATCTCTCTGCCTACCCAGAGTATATCCATAGA...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATCTATGGATATACTCTaGGTAGGCAGAGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVSMDIL*VGREMA
Trigger: AGCCATCTCTCTGCCTACCCAGAGTATATCCATAGA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTGTTTCAGCTGTCCTTaGGGCAGGTGTGGTCTCAAT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYCFSCP*GRCGLN
Trigger: ATTGAGACCACACCTGCCCCAAGGACAGCTGAAACA...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTGGCATCTTCCACTCTaGGTAAAGAGACATCCTGAA +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGWHLPL*VKRHPE
Trigger: TTCAGGATGTCTCTTTACCCAGAGTGGAAGATGCCA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGCATCAGTTGTGGATGTaGGACCTGACTCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLHQLWM*DLTQVP
Trigger: AGGCACCTGAGTCAGGTCCCACATCCACAACTGATG...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATCAGCTTCATCAGTTGTaGATGTGGGACCTGACTCAG +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYQLHQL*MWDLTQ
Trigger: CTGAGTCAGGTCCCACATCCACAACTGATGAAGCTG...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAAAATGGTCTCATTGCTaGAGAACAGATGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVKWSHC*RTDGQL
Trigger: AAGCTGCCCATCTGTTCTCCAGCAATGAGACCATTT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAAATGGTCTCATTGCTaGAGAACAGATGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHKWSHC*RTDGQL
Trigger: AAGCTGCCCATCTGTTCTCCAGCAATGAGACCATTT...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGGAGATGCTTTCAGTaGGGTGATATTGGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRWRCFQ*GDIGSC
Trigger: GCAACTACCAATATCACCCCACTGAAAGCATCTCCA...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAAGTCTGATCCAAAGGTaGTACCAATGCTGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVSLIQR*YQCCGH
Trigger: ATGACCACAGCATTGGTACCACCTTTGGATCAGACT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAAGTCTGATCCAAAGGTaGTACCAATGCTGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQSLIQR*YQCCGH
Trigger: ATGACCACAGCATTGGTACCACCTTTGGATCAGACT...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATCCGTGGCCTCTGAAGTaGTACGAATCAAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYPWPLK*YESSLH
Trigger: ATGGAGACTTGATTCGTACCACTTCAGAGGCCACGG...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAAGATGTGTGAGGGTGTaGTCTCATCAACAACAGAGG +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPRCVRV*SHQQQR
Trigger: CCTCTGTTGTTGATGAGACCACACCCTCACACATCT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGCAACTGGATGGACACTaGTGTGTGTACACGATATGT +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRQLDGH*CVYTIC
Trigger: ACATATCGTGTACACACACCAGTGTCCATCCAGTTG...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGTGCTAGTCACCAACTaGATGGACACTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIVLVTN*MDTGVC
Trigger: ACACACACCAGTGTCCATCCAGTTGGTGACTAGCAC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGTGTGCTTCCAGAAGTaGGAGATGAAGCCAAATTTC +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGVCFQK*EMKPNF
Trigger: GAAATTTGGCTTCATCTCCCACTTCTGGAAGCACAC...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAGAATTGATGGGAGTGTaGTCCCAGGAGTTACAGATG +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPELMGV*SQELQM
Trigger: CATCTGTAACTCCTGGGACCACACTCCCATCAATTC...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGGTTGGCAGTTATTGTaGTTCTGGAGGATGCCTCAG +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYGWQLL*FWRMPQ
Trigger: CTGAGGCATCCTCCAGAACCACAATAACTGCCAACC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGGTTGGCAGTTATTGTaGTTCTGGAGGATGCCTCAG +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIGWQLL*FWRMPQ
Trigger: CTGAGGCATCCTCCAGAACCACAATAACTGCCAACC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATACACAGTCCTGGGGTTaGCAGTTATTGTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYTQSWG*QLLWFW
Trigger: CCAGAACCACAATAACTGCCAACCCCAGGACTGTGT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTCCAACAGATAGAGTGTaGTCAGTTGTAGAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGPTDRV*SVVEGD
Trigger: GTCACCTTCTACAACTGACCACACTCTATCTGTTGG...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGCCAACAGATAGAGTGTaGTCAGTTGTAGAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRPTDRV*SVVEGD
Trigger: GTCACCTTCTACAACTGACCACACTCTATCTGTTGG...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATTTATGCATCTGGTTTaGGCTGTCTCCGTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPFMHLV*AVSVGL
Trigger: CAACCCTACGGAGACAGCCCAAACCAGATGCATAAA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTACAAAACGGAGTTGTTaGGCTCAGAGTTCCATACAG +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGTKRSC*AQSSIQ
Trigger: CTGTATGGAACTCTGAGCCCAACAACTCCGTTTTGT...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAGGCCATCCAATACCTTaGGTTGTCATCCATGAATAC +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPGHPIP*VVIHEY
Trigger: GTATTCATGGATGACAACTCAAGGTATTGGATGGCC...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGTCAGGTTGTGTGGTTaGTCCGTTACTTCCAGTATC +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIVRLCG*SVTSSI
Trigger: GATACTGGAAGTAACGGATCAACCACACAACCTGAC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCGCTGCTCTCATTCTTaGGAAAGTGCCCTAGGAACA +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFRCSHS*ESALGT
Trigger: TGTTCCTAGGGCACTTTCTCAAGAATGAGAGCAGCG...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTGTCACCCTTTGTGCTaGTTCGTCTGTCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLCHPLC*FVCHFQ
Trigger: CTGGAAGTGACAGACGAATCAGCACAAAGGGTGACA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGATTACCGTGGCCTCTaGAGTGGTACGAATCAAGTC +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLDYRGL*SGTNQV
Trigger: GACTTGATTCGTACCACTTCAGAGGCCACGGTAATC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGATTACCGTGGCCTCTaGAGTGGTACGAATCAAGTC +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFDYRGL*SGTNQV
Trigger: GACTTGATTCGTACCACTTCAGAGGCCACGGTAATC...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGAGAGTCTCAGTGAATaGAATGGTGTTTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQESLSE*NGVSVR
Trigger: TCTGACAGAAACACCATTTCATTCACTGAGACTCTC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAAGTGGAGAGTCTCAGTaGATGAAATGGTGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQSGESQ*MKWCFC
Trigger: ACAGAAACACCATTTCATTCACTGAGACTCTCCACT...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTAGTGGAGAGTCTCAGTaGATGAAATGGTGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGSGESQ*MKWCFC
Trigger: ACAGAAACACCATTTCATTCACTGAGACTCTCCACT...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGTGGAGAGTCTCAGTaGATGAAATGGTGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHSGESQ*MKWCFC
Trigger: ACAGAAACACCATTTCATTCACTGAGACTCTCCACT...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGGTGTAGACGTAGTTaGGATCACATGAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIWCRRS*DHMSGG
Trigger: TCCTCCACTCATGTGATCTCAACTACGTCTACACCA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAGGCGAATGTGTTTGGTaGCTGGAAATTTTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPGECVW*LEIFVV
Trigger: GACCACAAAAATTTCCAGTCACCAAACACATTCGCC...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGACCTACTGTGTTACTTaGGGTCAAGGTTGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRTYCVT*GQGWCN
Trigger: ATTACACCAACCTTGACCTCAAGTAACACAGTAGGT...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGTGTGCTTTCAGAAATaGAAGAGGCAACTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHVCFQK*KRQLKS
Trigger: TGACTTCAGTTGCCTCTTTCATTTCTGAAAGCACAC...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTGTGCTTTCAGAAATaGAAGAGGCAACTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQVCFQK*KRQLKS
Trigger: TGACTTCAGTTGCCTCTTTCATTTCTGAAAGCACAC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGGAATAAGTATCTGTaGGAGCTACCCCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIWNKYL*ELPLYH
Trigger: GTGGTACAGGGGTAGCTCTCACAGATACTTATTCCA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTAGAGGCTGTGAATGTTaGCAAAGGCCCAGGAACAAG +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFRGCEC*QRPRNK
Trigger: CTTGTTCCTGGGCCTTTGTCAACATTCACAGCCTCT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGATACTAGACCAGTCTaGGAGGCTGTGAATGTTGAC +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIDTRPV*EAVNVD
Trigger: GTCAACATTCACAGCCTCTCAGACTGGTCTAGTATC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGAGGAAGTCATAACATaGGGGGCATTAGATACAGTT +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGEEVIT*GALDTV
Trigger: AACTGTATCTAATGCCCCTCATGTTATGACTTCCTC...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGAGGAAGTCATAACATaGGGGGCATTAGATACAGTT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVEEVIT*GALDTV
Trigger: AACTGTATCTAATGCCCCTCATGTTATGACTTCCTC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGTCAGTTGTAGAAGGTaGCATAGTCTTTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVVSCRR*HSLSAE
Trigger: TTCAGCAGAAAGACTATGTCACCTTCTACAACTGAC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGTCAGTTGTAGAAGGTaGCATAGTCTTTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHVSCRR*HSLSAE
Trigger: TTCAGCAGAAAGACTATGTCACCTTCTACAACTGAC...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTACGTGTTGATGCTGATTaGACAGAATCTTGTGGCATT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVRVDAD*TESCGI
Trigger: AATGCCACAAGATTCTGTTCAATCAGCATCAACACG...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGAAAACTCCATCTTGTaGCCAGTACGCTCAATTATC +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGENSIL*PVRSII
Trigger: GATAATTGAGCGTACTGGTCACAAGATGGAGTTTTC...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTCATAGGAGTGAATGCTaGAAGCCATGCCATCAAACG +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIHRSEC*KPCHQT
Trigger: CGTTTGATGGCATGGCTTTCAGCATTCACTCCTATG...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTAGACTCCAAAATGGGTaGGGTGGTCACACTGACAGA +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFRLQNG*GGHTDR
Trigger: TCTGTCAGTGTGACCACCTCACCCATTTTGGAGTCT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAATATCTGTTCATTCACTaGATCCACTGTAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQYLFIH*IHCRPG
Trigger: TCCAGGTCTACAGTGGATTCAGTGAATGAACAGATA...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTATCTGTTCATTCACTaGATCCACTGTAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGYLFIH*IHCRPG
Trigger: TCCAGGTCTACAGTGGATTCAGTGAATGAACAGATA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGTGCCACTGCAGCTGTaGTACAAACTCCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFVPLQL*YKLPLS
Trigger: AGAAAGTGGGAGTTTGTATCACAGCTGCAGTGGCAC...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGGCTCATTGTGCCTTTaGGGTCATGCAGGATCATCT +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFGSLCL*GHAGSS
Trigger: AGATGATCCTGCATGACCTCAAAGGCACAATGAGCC...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTATCCAACCTTTATCTaGCACCGGCTGCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFYPTFI*HRLLPS
Trigger: TGATGGGAGCAGCCGGTGTCAGATAAAGGTTGGATA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTATCCAACCTTTATCTaGCACCGGCTGCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLYPTFI*HRLLPS
Trigger: TGATGGGAGCAGCCGGTGTCAGATAAAGGTTGGATA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGGAGCTAGTTGCAGTTaGCTTGAGAGATGGCGTCAA +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLGASCS*LERWRQ
Trigger: TTGACGCCATCTCTCAAGTCAACTGCAACTAGCTCC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATGGAAAGCTTATTTCTaGAGGTGTGCCTTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPWKAYF*RCALCR
Trigger: TCTGCACAAGGCACACCTTCAGAAATAAGCTTTCCA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTTTAGTGGTGATTTGTaGGATTTTGGTGCACCCATC +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGFSGDL*DFGAPI
Trigger: GATGGGTGCACCAAAATCTCACAAATCACCACTAAA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCTGCTGATGGTCTCCTaGAAGTCCAAGGTCTATGTC +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFLLMVS*KSKVYV
Trigger: GACATAGACCTTGGACTTGCAGGAGACCATCAGCAG...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTGGCAGTGGTACCTTTaGCCTCTGGAGATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLWQWYL*PLEMLS
Trigger: TGAAAGCATCTCCAGAGGGCAAAGGTACCACTGCCA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTCACCGAATATATGTGTaGTCCCAGAAGTGGGAGATC +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIHRIYV*SQKWEI
Trigger: GATCTCCCACTTCTGGGAGCACACATATATTCGGTG...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCTGGAAGGGCACTCGTaGTTTCCTTTTCAGGACACA +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFLEGHS*FPFQDT
Trigger: TGTGTCCTGAAAAGGAAAGCACGAGTGCCCTTCCAG...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGAGAGAAGGCAGTGGTaGCTACAAATGGAGTCACTA +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYERRQW*LQMESL
Trigger: TAGTGACTCCATTTGTAGGCACCACTGCCTTCTCTC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTGTGGTTCTGGAGGATaGCTCAGGGTGTGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFCGSGG*LRVCGN
Trigger: ATTTCCACACACCCTGAGGCATCCTCCAGAACCACA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGTCAGATTTGCTATCTaGCCAGAAAACTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVVRFAI*PENSIL
Trigger: CAAGATGGAGTTTTCTGGGCAGATAGCAAATCTGAC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGGTCAGATTTGCTATCTaGCCAGAAAACTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRVRFAI*PENSIL
Trigger: CAAGATGGAGTTTTCTGGGCAGATAGCAAATCTGAC...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAAATCTCAGGGTCTGTaGCTTCTTCATAGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHKSQGL*LLHRSE
Trigger: TTCACTCCTATGAAGAAGGCACAGACCCTGAGATTT...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAAAATCTCAGGGTCTGTaGCTTCTTCATAGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVKSQGL*LLHRSE
Trigger: TTCACTCCTATGAAGAAGGCACAGACCCTGAGATTT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACTGGTTTCCTCCAATATaGTGCAGAGTGATAACCACT +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHWFPPI*CRVITT
Trigger: AGTGGTTATCACTCTGCAGCATATTGGAGGAAACCA...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGCAAATACATGTGGACTaGCTCCAGGCCCATCCAAGT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLQIHVD*LQAHPS
Trigger: ACTTGGATGGGCCTGGAGGCAGTCCACATGTATTTG...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCACACTGACTGTGATTaGCACCATGATAGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFHTDCD*HHDSRD
Trigger: ATCCCGGCTATCATGGTGGCAATCACAGTCAGTGTG...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATGTGCCTTTGAGGTCATaGAGGATCATCTTCCGCCGA +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYVPLRS*RIIFRR
Trigger: TCGGCGGAAGATGATCCTGCATGACCTCAAAGGCAC...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTATTTCTGAAGGTGTaGCTTGTGCAGAGCCTAAAG +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRLFLKV*LVQSLK
Trigger: CTTTAGGCTCTGCACAAGGCACACCTTCAGAAATAA...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATTATTTCTGAAGGTGTaGCTTGTGCAGAGCCTAAAG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVLFLKV*LVQSLK
Trigger: CTTTAGGCTCTGCACAAGGCACACCTTCAGAAATAA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACATTTTCTGCTGTCCATaGCTCAGTCACCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHIFCCP*LSHLLF
Trigger: GAAAAGAAGGTGACTGAGGCATGGACAGCAGAAAAT...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394141.1
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATGTCCTGTCAACAGTTaGGATGATCTTGTTGACAAG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVCPVNS*DDLVDK
Trigger: CTTGTCAACAAGATCATCCCAACTGTTGACAGGACA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR CCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAAAATACAGAATCTACTaGAGCAGCTGTGGAGATGAG +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQKYRIY*SSCGDE
Trigger: CTCATCTCCACAGCTGCTCCAGTAGATTCTGTATTT...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAAAATACAGAATCTACTaGAGCAGCTGTGGAGATGAG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVKYRIY*SSCGDE
Trigger: CTCATCTCCACAGCTGCTCCAGTAGATTCTGTATTT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTGCTGGAGAACAGATaGGCAGCTTCATCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFILLENR*AASSVV
Trigger: CACAACTGATGAAGCTGCCCATCTGTTCTCCAGCAA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAAAATGGTCTCATTGCTaGAGAACAGATGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPKWSHC*RTDGQL
Trigger: AAGCTGCCCATCTGTTCTCCAGCAATGAGACCATTT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATGGAGATGCTTTCAGTaGGGTGATATTGGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPWRCFQ*GDIGSC
Trigger: GCAACTACCAATATCACCCCACTGAAAGCATCTCCA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGTGTGCTCCCAGAAGTaGGAGATCCAGCTGAAATTC +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLVCSQK*EIQLKF
Trigger: GAATTTCAGCTGGATCTCCCACTTCTGGGAGCACAC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAAGTCTGATCCAAAGGTaGTACCAATGCTGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPSLIQR*YQCCGH
Trigger: ATGACCACAGCATTGGTACCACCTTTGGATCAGACT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTCGAATCAAGTCTCCATaGGTAGGCACAATAACAATG +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGRIKSP*VGTITM
Trigger: CATTGTTATTGTGCCTACCCATGGAGACTTGATTCG...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTGAGATCACATGAGTaGAGGACGCAGGAGGAATGT +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFILRSHE*RTQEEC
Trigger: ACATTCCTCCTGCGTCCTCCACTCATGTGATCTCAA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGACCACTGAAAGTATATaGGAAGCTGAGAGCATAGGT +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRTTESI*EAESIG
Trigger: ACCTATGCTCTCAGCTTCCCATATACTTTCAGTGGT...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACACCACTGAAAGTATATaGGAAGCTGAGAGCATAGGT +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHTTESI*EAESIG
Trigger: ACCTATGCTCTCAGCTTCCCATATACTTTCAGTGGT...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAAGGGATATGGTCATCTaGTCTTTGTCGGAAGATAAG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVRDMVI*SLSEDK
Trigger: CTTATCTTCCGACAAAGACCAGATGACCATATCCCT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGGATATGGTCATCTaGTCTTTGTCGGAAGATAAG +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHRDMVI*SLSEDK
Trigger: CTTATCTTCCGACAAAGACCAGATGACCATATCCCT...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATCCTGGGAGTATATGCTaGAAGGGCACTCGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYPGSIC*KGTRAF
Trigger: GAAAGCACGAGTGCCCTTCCAGCATATACTCCCAGG...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTCATTTCCACAGTCCTaGGAGTATATGCTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYSFPQS*EYMLEG
Trigger: CCCTTCCAGCATATACTCCCAGGACTGTGGAAATGA...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACTATATAGTCCAGCTGTaGAAAGAGACAAGGACTCAG +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHYIVQL*KETRTQ
Trigger: CTGAGTCCTTGTCTCTTTCCACAGCTGGACTATATA...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATATAGTCCAGCTGTaGAAAGAGACAAGGACTCAG +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRYIVQL*KETRTQ
Trigger: CTGAGTCCTTGTCTCTTTCCACAGCTGGACTATATA...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGATAACCCAACTCTTGTaGAAGTGTCAGAAGAGACTG +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRITQLL*KCQKRL
Trigger: CAGTCTCTTCTGACACTTCCACAAGAGTTGGGTTAT...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAATAACCCAACTCTTGTaGAAGTGTCAGAAGAGACTG +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQITQLL*KCQKRL
Trigger: CAGTCTCTTCTGACACTTCCACAAGAGTTGGGTTAT...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTCAAAGTTGGCTCTGTTaGAGAGAGAAAGGTCGTAGG +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIQSWLC*REKGRR
Trigger: CCTACGACCTTTCTCTCTCCAACAGAGCCAACTTTG...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAATACAAAGGGCAAAGTTaGCTCTGTTGGAGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQYKGQS*LCWREK
Trigger: TTTCTCTCTCCAACAGAGCCAACTTTGCCCTTTGTA...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTAGTGGTGCCTACAAATaGAGTCACTATCCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFISGAYK*SHYPSH
Trigger: ATGGCTGGGATAGTGACTCCATTTGTAGGCACCACT...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATGCTCTTAGAACTGAGTaGAGAGAAGGCAGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYALRTE*REGSGA
Trigger: GGCACCACTGCCTTCTCTCCACTCAGTTCTAAGAGC...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATAGGAGGAGAGGTCTTTaGAGTAGAGATCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYRRRGL*SRDLSF
Trigger: GAAGCTGAGATCTCTACTCCAAAGACCTCTCCTCCT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGAGAACCTTCAGCTGTaGGTATGTTCCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIENLQL*VCSRKS
Trigger: TGACTTCCTGGAACATACCCACAGCTGAAGGTTCTC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTCTCAGAAAGCCCATaGTTAGGAAGAATTCCTGAC +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRFSESP*LGRIPD
Trigger: GTCAGGAATTCTTCCTAACCATGGGCTTTCTGAGAA...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGAATTGATGGGAGTGTaGTCCCAGGAGTTACAGATG +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIELMGV*SQELQM
Trigger: CATCTGTAACTCCTGGGACCACACTCCCATCAATTC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTCATAGGGAGAGAAGTTaGGAAGCCAGTAGTGATACC +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIHRERS*EASSDT
Trigger: GGTATCACTACTGGCTTCCCAACTTCTCTCCCTATG...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGCCTCAGGGTGTGTaGAAATGTACACAATGTCAT +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGMPQGV*KCTQCH
Trigger: ATGACATTGTGTACATTTCCACACACCCTGAGGCAT...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAATGCCTCAGGGTGTGTaGAAATGTACACAATGTCAT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVMPQGV*KCTQCH
Trigger: ATGACATTGTGTACATTTCCACACACCCTGAGGCAT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGATAGAAAGGAAGGTGTaGAGTCCAGCCAAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRIERKV*SPAKLF
Trigger: AAACAACTTGGCTGGACTCCACACCTTCCTTTCTAT...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGGTAATAGGGATCCTTaGCTCTTCAACAAAGACAGA +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHGNRDP*LFNKDR
Trigger: TCTGTCTTTGTTGAAGAGCCAAGGATCCCTATTACC...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGGGTAATAGGGATCCTTaGCTCTTCAACAAAGACAGA +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRGNRDP*LFNKDR
Trigger: TCTGTCTTTGTTGAAGAGCCAAGGATCCCTATTACC...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTTTATGCATCTGGTTTaGGCTGTCTCCGTAGGGTTG +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYFMHLV*AVSVGL
Trigger: CAACCCTACGGAGACAGCCCAAACCAGATGCATAAA...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTATCATCTGAAATGCTaGCACTCACAACATAGGTGG +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGYHLKC*HSQHRW
Trigger: CCACCTATGTTGTGAGTGCCAGCATTTCAGATGATA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATATCATCTGAAATGCTaGCACTCACAACATAGGTGG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVYHLKC*HSQHRW
Trigger: CCACCTATGTTGTGAGTGCCAGCATTTCAGATGATA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATAGAGCCAAATACATGTaGACTGCCTCCAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYRAKYM*TASRPI
Trigger: GATGGGCCTGGAGGCAGTCCACATGTATTTGGCTCT...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGTATCTTCCATTCCCTaGAAGGTTATGAGGAGAATG +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHVSSIP*KVMRRM
Trigger: CATTCTCCTCATAACCTTCCAGGGAATGGAAGATAC...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394143.6
CDS-3UTR TCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTTGAGTTGTCATCCATaGATACCAGATCAATGCATG +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGLSCHP*IPDQCM
Trigger: CATGCATTGATCTGGTATTCATGGATGACAACTCAA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTGTATGCCATTGAAATaGAGCCAGGTGGTGACGGAT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLCMPLK*SQVVTD
Trigger: ATCCGTCACCACCTGGCTTCATTTCAATGGCATACA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATTCGTAACAGCCGACTaGGATTTAATTGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVFVTAD*DLIAEV
Trigger: AACTTCAGCAATTAAATCTCAGTCGGCTGTTACGAA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAATGAGTAGATGCAGGTaGAGTCTTTTCCACTGTAAA +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQMSRCR*SLFHCK
Trigger: TTTACAGTGGAAAAGACTTCACCTGCATCTACTCAT...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGTTGGGAGAGTCAATaGATGGACTGTAAATGCTAT +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHSWESQ*MDCKCY
Trigger: ATAGCATTTACAGTCCATTCATTGACTCTCCCAACT...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAAGTTGGGAGAGTCAATaGATGGACTGTAAATGCTAT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVSWESQ*MDCKCY
Trigger: ATAGCATTTACAGTCCATTCATTGACTCTCCCAACT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGAGTTGGGAGAGTCAATaGATGGACTGTAAATGCTAT +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRSWESQ*MDCKCY
Trigger: ATAGCATTTACAGTCCATTCATTGACTCTCCCAACT...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTCTTTGTGTTGTTGCTaGCTTTGGTACAGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLSLCCC*LWYRGR
Trigger: ACGACCCCTGTACCAAAGTCAGCAACAACACAAAGA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTCTTTGTGTTGTTGCTaGCTTTGGTACAGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFSLCCC*LWYRGR
Trigger: ACGACCCCTGTACCAAAGTCAGCAACAACACAAAGA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTGTCACCCTTTGTGCTaGTTCGTCTGTCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYCHPLC*FVCHFQ
Trigger: CTGGAAGTGACAGACGAATCAGCACAAAGGGTGACA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCCTCAGATGTCTCTaGAGTCCAATGTGCTACATA +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFISLRCL*SPMCYI
Trigger: TATGTAGCACATTGGACTTCAGAGACATCTGAGGGA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTCCCTCAGATGTCTCTaGAGTCCAATGTGCTACATA +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYSLRCL*SPMCYI
Trigger: TATGTAGCACATTGGACTTCAGAGACATCTGAGGGA...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGGAGAAACTGGTTTCTaGTATCCTTGTGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYGETGF*YPCGRS
Trigger: GCTTCTACCACAAGGATATCAGAAACCAGTTTCTCC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGTTGTGGAAGCAGTCTaGTCCAAAGGTGGTACCAAT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLVVEAV*SKGGTN
Trigger: ATTGGTACCACCTTTGGATCAGACTGCTTCCACAAC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATGATTACCGTGGCCTCTaGAGTGGTACGAATCAAGTC +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYDYRGL*SGTNQV
Trigger: GACTTGATTCGTACCACTTCAGAGGCCACGGTAATC...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGGTTACTGTATCAACTaGGGTAGAGAAAAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYGYCIN*GREKGG
Trigger: ACCACCCTTTTCTCTACCTCAGTTGATACAGTAACC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATATTGGCAGAGATGTGTaGGGGTGTGGTCTCATCAAC +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYIGRDV*GCGLIN
Trigger: GTTGATGAGACCACACCCTCACACATCTCTGCCAAT...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGGCGAATGTGTTTGGTaGCTGGAAATTTTTGTGGTC +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIGECVW*LEIFVV
Trigger: GACCACAAAAATTTCCAGTCACCAAACACATTCGCC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGACATTTCTGGAATGTaGACACCTACTGTGTTACTT +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHDISGM*TPTVLL
Trigger: AAGTAACACAGTAGGTGTTCACATTCCAGAAATGTC...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTAGTATCCTGGCCATATaGGACAGAGTGAGTCACATA +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFISILAI*DRVSHI
Trigger: TATGTGACTCACTCTGTCTCATATGGCCAGGATACT...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTACATTAACTGGCAATaGGGACATCTGGTAAATAGG +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRYINWQ*GHLVNR
Trigger: CCTATTTACCAGATGTCCTCATTGCCAGTTAATGTA...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTGGAATAAGTATCTGTaGGAGCTACCCCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFWNKYL*ELPLYH
Trigger: GTGGTACAGGGGTAGCTCTCACAGATACTTATTCCA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTGGAGACTATCTGCATaGGTAGGTGAAAGCATATTT +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGWRLSA*VGESIF
Trigger: AAATATGCTTTCACCTACTCATGCAGATAGTCTCCA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGGGAAACCTGAATATTaGAGGAAGTATGGAGACTAT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVGKPEY*RKYGDY
Trigger: ATAGTCTCCATACTTCCTTCAATATTCAGGTTTCCC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAAGAGATGGGGAAACCTaGATATTGAAGGAAGTATGG +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPRDGET*ILKEVW
Trigger: CCATACTTCCTTCAATATTCAGGTTTCCCCATCTCT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGGTCCATGGAGGGTATaGAACAGGGGTATTCAAAGA +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFGPWRV*NRGIQR
Trigger: TCTTTGAATACCCCTGTTTCATACCCTCCATGGACC...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGTGGAAATTGGAAACTaGGAACCTTCAGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLVEIGN*EPSAVG
Trigger: ACCCACAGCTGAAGGTTCTCAGTTTCCAATTTCCAC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATAGAGGCTGTGAATGTTaGCAAAGGCCCAGGAACAAG +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYRGCEC*QRPRNK
Trigger: CTTGTTCCTGGGCCTTTGTCAACATTCACAGCCTCT...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTAGTGAATGGGTGCGCTaGTATCATGTCAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFSEWVR*YHVRCQ
Trigger: CTGACATCTGACATGATATCAGCGCACCCATTCACT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGCTTTTATGATGACCTaGCAAACACAACTGTATGGT +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQAFMMT*QTQLYG
Trigger: ACCATACAGTTGTGTTTGTCAGGTCATCATAAAAGC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGTGTTGATGCTGATTaGACAGAATCTTGTGGCATT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPRVDAD*TESCGI
Trigger: AATGCCACAAGATTCTGTTCAATCAGCATCAACACG...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGCATAGGAGTGAATGCTaGAAGCCATGCCATCAAACG +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLHRSEC*KPCHQT
Trigger: CGTTTGATGGCATGGCTTTCAGCATTCACTCCTATG...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAAATGAACATATCATCTaGAATGCTGGCACTCACAAC +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQNEHII*NAGTHN
Trigger: GTTGTGAGTGCCAGCATTTCAGATGATATGTTCATT...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGAATGAACATATCATCTaGAATGCTGGCACTCACAAC +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRNEHII*NAGTHN
Trigger: GTTGTGAGTGCCAGCATTTCAGATGATATGTTCATT...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGTGCTGTGCACAGGTTaGTCAGAATTTTGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLVLCTG*SEFWQD
Trigger: ATCCTGCCAAAATTCTGATCAACCTGTGCACAGCAC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTACAAACTCCCACTTTCTaGAATGATGACAACCAAGAA +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVQTPTF*NDDNQE
Trigger: TTCTTGGTTGTCATCATTTCAGAAAGTGGGAGTTTG...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATTCACAGAATTCAGTTaGACAAGAACAGTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVFTEFS*TRTVQN
Trigger: GTTCTGCACTGTTCTTGTTCAACTGAATTCTGTGAA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTCATTCTTGAGAAAGTaGCCTAGGAACAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYSFLRK*PRNRVP
Trigger: TGGGACTCTGTTCCTAGGGCACTTTCTCAAGAATGA...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR GCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGTTGCCAATGGAAATaGTGTCTGGTTTCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRCCQWK*CLVSRK
Trigger: TTTCCTAGAAACCAGACAGCATTTCCATTGGCAACA...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATGTTGCCAATGGAAATaGTGTCTGGTTTCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVCCQWK*CLVSRK
Trigger: TTTCCTAGAAACCAGACAGCATTTCCATTGGCAACA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTGTTGCCAATGGAAATaGTGTCTGGTTTCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGCCQWK*CLVSRK
Trigger: TTTCCTAGAAACCAGACAGCATTTCCATTGGCAACA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTTGCCCTCTGGAGATaGTTTCAGTGGGGTGATATT +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIFALWR*FQWGDI
Trigger: AATATCACCCCACTGAAAGCATCTCCAGAGGGCAAA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTAGATATTGGTTGAGTTaGTTCTGGTGTAGACGTAGT +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGRYWLS*FWCRRS
Trigger: ACTACGTCTACACCAGAAGCAACTCAACCAATATCT...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATGTGATCCTGGAAGGTaGCTCTATCATTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPCDPGR*LYHFCS
Trigger: ACTACAGAAATGATAGAGGCACCTTCCAGGATCACA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTCTGTTTCATCAGCTTTaGAATTTCCAGGCTCTAGTT +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGLFHQL*NFQALV
Trigger: AACTAGAGCCTGGAAATTGCAAAGCTGATGAAACAG...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACTCATTGCTTATTTCATaGAGATCAGAGGCGGAATTG +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHSLLIS*RSEAEL
Trigger: CAATTCCGCCTCTGATCTGCATGAAATAAGCAATGA...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACACATATCATCTGAAATaGTGGCACTCACAACATAGG +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHTYHLK*WHSQHR
Trigger: CCTATGTTGTGAGTGCCAGCATTTCAGATGATATGT...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATGGTTTCCTCCAATATaGTGCAGAGTGATAACCACT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPWFPPI*CRVITT
Trigger: AGTGGTTATCACTCTGCAGCATATTGGAGGAAACCA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATATGTATGTCACCACTaGAACTCCCAGAAAAATGGA +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVYVCHH*NSQKNG
Trigger: TCCATTTTTCTGGGAGTTGCAGTGGTGACATACATA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTCAGGAAGTAATGAAGTaGCACTGCAGCTGTGATACA +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIQEVMK*HCSCDT
Trigger: TGTATCACAGCTGCAGTGGCACTTCATTACTTCCTG...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATCAAATACATGTGGACTaGCTCCAGGCCCATCCAAGT +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYQIHVD*LQAHPS
Trigger: ACTTGGATGGGCCTGGAGGCAGTCCACATGTATTTG...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGAGGAGACTCATTTTCTaGTGTCCATGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLRRLIF*CPCLSH
Trigger: GTGACTGAGGCATGGACAGCAGAAAATGAGTCTCCT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394141.1
CDS-3UTR CCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAATCCAGTAATTTGGGATaGAGTGGTCATATCTATCTG +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQSSNLG*SGHIYL
Trigger: CAGATAGATATGACCACTCCATCCCAAATTACTGGA...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAACAGGCATATTGGTTATaGATGTGGTTCCAGAAACTA +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQQAYWL*MWFQKL
Trigger: TAGTTTCTGGAACCACATCCATAACCAATATGCCTG...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAAACAACAGTCTCCCTTaGTGTCAAAGGAAGTTCATT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVNNSLP*CQRKFI
Trigger: AATGAACTTCCTTTGACACCAAGGGAGACTGTTGTT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGTGTACACGATATGTaGCAGATGAAGAAATGTGAC +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRCVHDM*QMKKCD
Trigger: GTCACATTTCTTCATCTGCCACATATCGTGTACACA...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGTGTGCTTCCAGAAGTaGGAGATGAAGCCAAATTTC +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIVCFQK*EMKPNF
Trigger: GAAATTTGGCTTCATCTCCCACTTCTGGAAGCACAC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGTGTGCTTCCAGAAGTaGGAGATGAAGCCAAATTTC +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYVCFQK*EMKPNF
Trigger: GAAATTTGGCTTCATCTCCCACTTCTGGAAGCACAC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGACTGGTAGACATTTCTaGAATGTGAACACCTACTGT +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRTGRHF*NVNTYC
Trigger: ACAGTAGGTGTTCACATTCCAGAAATGTCTACCAGT...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTCATTTCCACAGTCCTaGGAGTATATGCTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFSFPQS*EYMLEG
Trigger: CCCTTCCAGCATATACTCCCAGGACTGTGGAAATGA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGAGTGGTGCCTACAAATaGAGTCACTATCCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLSGAYK*SHYPSH
Trigger: ATGGCTGGGATAGTGACTCCATTTGTAGGCACCACT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGGAAATTCAACCATTTaGGATGTGGGAGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFGNSTI*DVGGGE
Trigger: CTCTCCTCCTCCCACATCCCAAATGGTTGAATTTCC...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTCTTGTTCCCAGAACTaGAAATTCAACCATTTGGGA +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRSCSQN*KFNHLG
Trigger: TCCCAAATGGTTGAATTTCCAGTTCTGGGAACAAGA...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAATAGTGGTGGAAATTaGAAACTGAGAACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHNSGGN*KLRTFS
Trigger: GCTGAAGGTTCTCAGTTTCCAATTTCCACCACTATT...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAAATAGTGGTGGAAATTaGAAACTGAGAACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVNSGGN*KLRTFS
Trigger: GCTGAAGGTTCTCAGTTTCCAATTTCCACCACTATT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAAGAGCCATGTCAGAATaGGTGACTTTGAAATTACAG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVRAMSE*VTLKLQ
Trigger: CTGTAATTTCAAAGTCACCCATTCTGACATGGCTCT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAATAGAAAGGAAGGTGTaGAGTCCAGCCAAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPIERKV*SPAKLF
Trigger: AAACAACTTGGCTGGACTCCACACCTTCCTTTCTAT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATCCCTGCTTTTAATTTaGGTTTCCAGAGTAGCAAGA +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVSLLLI*VSRVAR
Trigger: TCTTGCTACTCTGGAAACCCAAATTAAAAGCAGGGA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTACAAAACGGAGTTGTTaGGCTCAGAGTTCCATACAG +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFITKRSC*AQSSIQ
Trigger: CTGTATGGAACTCTGAGCCCAACAACTCCGTTTTGT...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAACGAGTCTTCTGGATTTaGGATTTCACAGAATTCAGT +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQRVFWI*DFTEFS
Trigger: ACTGAATTCTGTGAAATCCCAAATCCAGAAGACTCG...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATTGAGTTGTCATCCATaGATACCAGATCAATGCATG +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPLSCHP*IPDQCM
Trigger: CATGCATTGATCTGGTATTCATGGATGACAACTCAA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGAAGGTGTAGGTGGTTaGAAGATTTCAGTAGCCATG +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLEGVGG*KISVAM
Trigger: CATGGCTACTGAAATCTTTCAACCACCTACACCTTC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATTCGTAACAGCCGACTaGGATTTAATTGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPFVTAD*DLIAEV
Trigger: AACTTCAGCAATTAAATCTCAGTCGGCTGTTACGAA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTGTCATTTCATTGTATaGACTCCTAGGTGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGCHFIV*TPRCGF
Trigger: AAAACCACACCTAGGAGTTCATACAATGAAATGACA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATGTCATTTCATTGTATaGACTCCTAGGTGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVCHFIV*TPRCGF
Trigger: AAAACCACACCTAGGAGTTCATACAATGAAATGACA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATGTTGTGGAAGCAGTCTaGTCCAAAGGTGGTACCAAT +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYVVEAV*SKGGTN
Trigger: ATTGGTACCACCTTTGGATCAGACTGCTTCCACAAC...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGAGAGTCTCAGTGAATaGAATGGTGTTTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYESLSE*NGVSVR
Trigger: TCTGACAGAAACACCATTTCATTCACTGAGACTCTC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAACGATATGTGGCAGATaGAGAAATGTGACTGTTTAC +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPTICGR*RNVTVY
Trigger: GTAAACAGTCACATTTCTTCATCTGCCACATATCGT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAGACATTTCTGGAATGTaGACACCTACTGTGTTACTT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPDISGM*TPTVLL
Trigger: AAGTAACACAGTAGGTGTTCACATTCCAGAAATGTC...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAGGGAAACCTGAATATTaGAGGAAGTATGGAGACTAT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPGKPEY*RKYGDY
Trigger: ATAGTCTCCATACTTCCTTCAATATTCAGGTTTCCC...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATAGAGATGGGGAAACCTaGATATTGAAGGAAGTATGG +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYRDGET*ILKEVW
Trigger: CCATACTTCCTTCAATATTCAGGTTTCCCCATCTCT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTGGAATTCTGTTCCATaGAGATGTTATTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGWNSVP*RCYCRA
Trigger: AGCTCTACAATAACATCTTCATGGAACAGAATTCCA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAAAAGGACGATATTGGTaGAGACACAGTTGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPKGRYW*RHSCCK
Trigger: TTTACAGCAACTGTGTCTTCACCAATATCGTCCTTT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATCGTGTTGATGCTGATTaGACAGAATCTTGTGGCATT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYRVDAD*TESCGI
Trigger: AATGCCACAAGATTCTGTTCAATCAGCATCAACACG...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGAAAACTCCATCTTGTaGCCAGTACGCTCAATTATC +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYENSIL*PVRSII
Trigger: GATAATTGAGCGTACTGGTCACAAGATGGAGTTTTC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTAATTCTCTCCGTCAGTaGTTTAGGCAAATATATGGA +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGNSLRQ*FRQIYG
Trigger: TCCATATATTTGCCTAAATCACTGACGGAGAGAATT...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATCTTTACTTTACAGCCTaGCGAATTCCATCCACCCAG +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYLYFTA*RIPSTQ
Trigger: CTGGGTGGATGGAATTCGTCAGGCTGTAAAGTAAAG...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTATCTGTTCATTCACTaGATCCACTGTAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIYLFIH*IHCRPG
Trigger: TCCAGGTCTACAGTGGATTCAGTGAATGAACAGATA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTACCAGATCAATGCATaGTGTGAATCGGCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFYQINA*CESAEF
Trigger: GAACTCAGCCGATTCACAGCATGCATTGATCTGGTA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR GCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTCATTCTTGAGAAAGTaGCCTAGGAACAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFSFLRK*PRNRVP
Trigger: TGGGACTCTGTTCCTAGGGCACTTTCTCAAGAATGA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR GCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTGTGGAGATAGGGAGTaGCCCAGTATTTGTGGATTT +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFCGDRE*PSICGF
Trigger: AAATCCACAAATACTGGGGCACTCCCTATCTCCACA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTACAAAGGAAGTTCATTTaGAGGTTTTGTAGACATAGG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVQRKFI*RFCRHR
Trigger: CCTATGTCTACAAAACCTGCAAATGAACTTCCTTTG...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATCACCGAATATATGTGTaGTCCCAGAAGTGGGAGATC +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYHRIYV*SQKWEI
Trigger: GATCTCCCACTTCTGGGAGCACACATATATTCGGTG...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAAGATATTGGTTGAGTTaGTTCTGGTGTAGACGTAGT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPRYWLS*FWCRRS
Trigger: ACTACGTCTACACCAGAAGCAACTCAACCAATATCT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTAATAGGAGTGGACGTTaGCATAGAGGATTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFNRSGR*HRGFSR
Trigger: CCTAGAGAATCCTCTATGGCAACGTCCACTCCTATT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGTCAGAAGAGACTGTTaGAGGTGTGAAAGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLVRRDC*RCESRV
Trigger: AACTCTGCTTTCACACCTGCAACAGTCTCTTCTGAC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATCCAATGTAGATGTTTaGATGGTCATAGTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPSNVDV*MVIVVL
Trigger: CAGGACTACTATGACCATGCAAACATCTACATTGGA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTGTGATCCTGGAAGGTaGCTCTATCATTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYCDPGR*LYHFCS
Trigger: ACTACAGAAATGATAGAGGCACCTTCCAGGATCACA...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACTGTTTCATCAGCTTTaGAATTTCCAGGCTCTAGTT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPLFHQL*NFQALV
Trigger: AACTAGAGCCTGGAAATTGCAAAGCTGATGAAACAG...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTTTCCTCCAATATGCTaGAGAGTGATAACCACTGGG +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFFPPIC*RVITTG
Trigger: CCCAGTGGTTATCACTCTGCAGCATATTGGAGGAAA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGTAATGAAGTGCCACTaGAGCTGTGATACAAACTCC +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLVMKCH*SCDTNS
Trigger: GGAGTTTGTATCACAGCTGCAGTGGCACTTCATTAC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTTATCTGACACCGGCTaGTCCCATCAGAAGAGTTAT +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFLSDTG*SHQKSY
Trigger: ATAACTCTTCTGATGGGAGCAGCCGGTGTCAGATAA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGGCGTCAACAGTTTGTaGTCAAAGATTTTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVGVNSL*SKIFFS
Trigger: ACTAAAGAAAATCTTTGAGCACAAACTGTTGACGCC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGGCGTCAACAGTTTGTaGTCAAAGATTTTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHGVNSL*SKIFFS
Trigger: ACTAAAGAAAATCTTTGAGCACAAACTGTTGACGCC...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTATTTCTGAAGGTGTaGCTTGTGCAGAGCCTAAAG +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFILFLKV*LVQSLK
Trigger: CTTTAGGCTCTGCACAAGGCACACCTTCAGAAATAA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTGTCCTGTCAACAGTTaGGATGATCTTGTTGACAAG +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYCPVNS*DDLVDK
Trigger: CTTGTCAACAAGATCATCCCAACTGTTGACAGGACA...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTCTATGGATATACTCTaGGTAGGCAGAGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLSMDIL*VGREMA
Trigger: AGCCATCTCTCTGCCTACCCAGAGTATATCCATAGA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACATTAGAAGGTGTAGGTaGTTGAAAGATTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHIRRCR*LKDFSS
Trigger: GCTACTGAAATCTTTCAACCACCTACACCTTCTAAT...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATAAATACAGAATCTACTaGAGCAGCTGTGGAGATGAG +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYKYRIY*SSCGDE
Trigger: CTCATCTCCACAGCTGCTCCAGTAGATTCTGTATTT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTGGCATCTTCCACTCTaGGTAAAGAGACATCCTGAA +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLWHLPL*VKRHPE
Trigger: TTCAGGATGTCTCTTTACCCAGAGTGGAAGATGCCA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTGGTTATGGATGTaGTTCCAGAAACTATGGAGA +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRYWLWM*FQKLWR
Trigger: TCTCCATAGTTTCTGGAACCACATCCATAACCAATA...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATATTGGTTATGGATGTaGTTCCAGAAACTATGGAGA +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVYWLWM*FQKLWR
Trigger: TCTCCATAGTTTCTGGAACCACATCCATAACCAATA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGCATATTGGTTATaGATGTGGTTCCAGAAACTA +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPQAYWL*MWFQKL
Trigger: TAGTTTCTGGAACCACATCCATAACCAATATGCCTG...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATACCACTGAAAGTATATaGGAAGCTGAGAGCATAGGT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYTTESI*EAESIG
Trigger: ACCTATGCTCTCAGCTTCCCATATACTTTCAGTGGT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATGTGTACACGATATGTaGCAGATGAAGAAATGTGAC +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPCVHDM*QMKKCD
Trigger: GTCACATTTCTTCATCTGCCACATATCGTGTACACA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGCAACTGGATGGACACTaGTGTGTGTACACGATATGT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLQLDGH*CVYTIC
Trigger: ACATATCGTGTACACACACCAGTGTCCATCCAGTTG...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGGACTGGAAATTTTTGTaGTCTCAGGAAATCCTGTAT +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRDWKFL*SQEILY
Trigger: ATACAGGATTTCCTGAGACCACAAAAATTTCCAGTC...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAAGTGAGTCACATAGGTaGAGTTTACTATCATTTCCA +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVSESHR*SLLSFP
Trigger: TGGAAATGATAGTAAACTCCACCTATGTGACTCACT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGAGTGAGTCACATAGGTaGAGTTTACTATCATTTCCA +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRSESHR*SLLSFP
Trigger: TGGAAATGATAGTAAACTCCACCTATGTGACTCACT...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAATATCCTTGTTGAGCTaGAAGTTGTGGTATCTACAA +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVISLLS*KLWYLQ
Trigger: TTGTAGATACCACAACTTCCAGCTCAACAAGGATAT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATATAGTCCAGCTGTaGAAAGAGACAAGGACTCAG +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYYIVQL*KETRTQ
Trigger: CTGAGTCCTTGTCTCTTTCCACAGCTGGACTATATA...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATCAAAGTTGGCTCTGTTaGAGAGAGAAAGGTCGTAGG +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYQSWLC*REKGRR
Trigger: CCTACGACCTTTCTCTCTCCAACAGAGCCAACTTTG...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTACAAAGGGCAAAGTTaGCTCTGTTGGAGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIYKGQS*LCWREK
Trigger: TTTCTCTCTCCAACAGAGCCAACTTTGCCCTTTGTA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTAAAGCTAGTCAGAGATaGGGAAACCTGAATATTGAA +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGKASQR*GNLNIE
Trigger: TTCAATATTCAGGTTTCCCCATCTCTGACTAGCTTT...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGGGTATTCAAAGATGTaGCATAGTTTGTTAAGGAAG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVGYSKM*HSLLRK
Trigger: CTTCCTTAACAAACTATGCCACATCTTTGAATACCC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATCTTGTTCCCAGAACTaGAAATTCAACCATTTGGGA +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPSCSQN*KFNHLG
Trigger: TCCCAAATGGTTGAATTTCCAGTTCTGGGAACAAGA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGTCATAAGCAGAGGTTaGGTATTACTAGATGTCATT +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHVISRG*VLLDVI
Trigger: AATGACATCTAGTAATACCCAACCTCTGCTTATGAC...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGTCATAAGCAGAGGTTaGGTATTACTAGATGTCATT +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGVISRG*VLLDVI
Trigger: AATGACATCTAGTAATACCCAACCTCTGCTTATGAC...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTCAGGAGTTACAGATGTaGTCATTTTCTCAAATGTGT +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGQELQM*SFSQMC
Trigger: ACACATTTGAGAAAATGACCACATCTGTAACTCCTG...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGCCAACAGATAGAGTGTaGTCAGTTGTAGAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLPTDRV*SVVEGD
Trigger: GTCACCTTCTACAACTGACCACACTCTATCTGTTGG...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGACAAAACGGAGTTGTTaGGCTCAGAGTTCCATACAG +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLTKRSC*AQSSIQ
Trigger: CTGTATGGAACTCTGAGCCCAACAACTCCGTTTTGT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGAGTCTTCTGGATTTaGGATTTCACAGAATTCAGT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPRVFWI*DFTEFS
Trigger: ACTGAATTCTGTGAAATCCCAAATCCAGAAGACTCG...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATGGCCATCCAATACCTTaGGTTGTCATCCATGAATAC +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYGHPIP*VVIHEY
Trigger: GTATTCATGGATGACAACTCAAGGTATTGGATGGCC...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR TCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATAATGAAGCCAGGTGGTaGCGGATAGAAAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYNEARW*RIEKVF
Trigger: AAAGACCTTTTCTATCCGTCACCACCTGGCTTCATT...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATATTAGCAAACCATGGTaGTGTCAATTTGGATACAGC +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYISKPW*CQFGYS
Trigger: GCTGTATCCAAATTGACATCACCATGGTTTGCTAAT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTATTAGCAAACCATGGTaGTGTCAATTTGGATACAGC +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIISKPW*CQFGYS
Trigger: GCTGTATCCAAATTGACATCACCATGGTTTGCTAAT...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTACGATATGTGGCAGATaGAGAAATGTGACTGTTTAC +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFITICGR*RNVTVY
Trigger: GTAAACAGTCACATTTCTTCATCTGCCACATATCGT...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTACCTACTGTGTTACTTaGGGTCAAGGTTGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFTYCVT*GQGWCN
Trigger: ATTACACCAACCTTGACCTCAAGTAACACAGTAGGT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGACATTTCTGGAATGTaGACACCTACTGTGTTACTT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYDISGM*TPTVLL
Trigger: AAGTAACACAGTAGGTGTTCACATTCCAGAAATGTC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATAGTATCCTGGCCATATaGGACAGAGTGAGTCACATA +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYSILAI*DRVSHI
Trigger: TATGTGACTCACTCTGTCTCATATGGCCAGGATACT...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTACATTAACTGGCAATaGGGACATCTGGTAAATAGG +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIYINWQ*GHLVNR
Trigger: CCTATTTACCAGATGTCCTCATTGCCAGTTAATGTA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGCTTGTGATGACTGTTaGGTTGCTGATAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFACDDC*VADRNG
Trigger: ACCATTTCTATCAGCAACTCAACAGTCATCACAAGC...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGCTTGTGATGACTGTTaGGTTGCTGATAGAAATGGT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLACDDC*VADRNG
Trigger: ACCATTTCTATCAGCAACTCAACAGTCATCACAAGC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTATCTGCATGAGTAGGTaGAAGCATATTTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIICMSR*KHIFRN
Trigger: GTTCCTGAAAATATGCTTTCACCTACTCATGCAGAT...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGAGAGATGGGGAAACCTaGATATTGAAGGAAGTATGG +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLRDGET*ILKEVW
Trigger: CCATACTTCCTTCAATATTCAGGTTTCCCCATCTCT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGTCAGTTGTAGAAGGTaGCATAGTCTTTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFVSCRR*HSLSAE
Trigger: TTCAGCAGAAAGACTATGTCACCTTCTACAACTGAC...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATAAAGGACGATATTGGTaGAGACACAGTTGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYKGRYW*RHSCCK
Trigger: TTTACAGCAACTGTGTCTTCACCAATATCGTCCTTT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAGGGTCAGCTAAGTTTTaGATGAACATATCATCTGAA +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPGSAKF*MNISSE
Trigger: TTCAGATGATATGTTCATTCAAAACTTAGCTGACCC...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTTTAGTGGTGATTTGTaGGATTTTGGTGCACCCATC +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLFSGDL*DFGAPI
Trigger: GATGGGTGCACCAAAATCTCACAAATCACCACTAAA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGGAAGAGTTCTAATTTaGCCTTCACACCATCCCATA +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFGRVLI*PSHHPI
Trigger: TATGGGATGGTGTGAAGGGCAAATTAGAACTCTTCC...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR GCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGGTTGTGTAATCAGTTaGAAATATAGGTATGCTTTG +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQGCVIS*KYRYAL
Trigger: CAAAGCATACCTATATTTGCAACTGATTACACAACC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATCTCACCTCAGTTGTTaGAGTTTTATTATCCAATGG +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPSHLSC*SFIIQW
Trigger: CCATTGGATAATAAAACTGCAACAACTGAGGTGAGA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACTGTGTCCTAAGTGAATaGAAGTGTGAAAAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHCVLSE*KCEKVV
Trigger: TACAACTTTTTCACACTTGCATTCACTTAGGACACA...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATAATAGGAGTGGACGTTaGCATAGAGGATTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYNRSGR*HRGFSR
Trigger: CCTAGAGAATCCTCTATGGCAACGTCCACTCCTATT...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAATGTAGATGTTTaGATGGTCATAGTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFISNVDV*MVIVVL
Trigger: CAGGACTACTATGACCATGCAAACATCTACATTGGA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTCCTCAGAATTTCATTaGTTATTTCATGCAGATCAG +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGSSEFH*LFHADQ
Trigger: CTGATCTGCATGAAATAAGCAATGAAATTCTGAGGA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATCCTCAGAATTTCATTaGTTATTTCATGCAGATCAG +
Preference number: 4 (lower is better)
Translates to: HYLVVICEILVHPSPEQVSSEFH*LFHADQ
Trigger: CTGATCTGCATGAAATAAGCAATGAAATTCTGAGGA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTTTCCTCCAATATGCTaGAGAGTGATAACCACTGGG +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYFPPIC*RVITTG
Trigger: CCCAGTGGTTATCACTCTGCAGCATATTGGAGGAAA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTGGTTTCCTCCAATATaGTGCAGAGTGATAACCACT +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFWFPPI*CRVITT
Trigger: AGTGGTTATCACTCTGCAGCATATTGGAGGAAACCA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTTATCTGACACCGGCTaGTCCCATCAGAAGAGTTAT +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYLSDTG*SHQKSY
Trigger: ATAACTCTTCTGATGGGAGCAGCCGGTGTCAGATAA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAGGCGTCAACAGTTTGTaGTCAAAGATTTTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPGVNSL*SKIFFS
Trigger: ACTAAAGAAAATCTTTGAGCACAAACTGTTGACGCC...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATATCAGTTGTTGCCAATaGAAATGCTGTCTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYISCCQ*KCCLVS
Trigger: AGAAACCAGACAGCATTTCCATTGGCAACAACTGAT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTGGAGATGCTTTCAGTaGGGTGATATTGGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYWRCFQ*GDIGSC
Trigger: GCAACTACCAATATCACCCCACTGAAAGCATCTCCA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAATGGTGATGTCAATTTaGATACAGCTGTTGTATATC +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQMVMSI*IQLLYI
Trigger: GATATACAACAGCTGTATCCAAATTGACATCACCAT...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTCAGGCATATTGGTTATaGATGTGGTTCCAGAAACTA +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIQAYWL*MWFQKL
Trigger: TAGTTTCTGGAACCACATCCATAACCAATATGCCTG...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATAACAACAGTCTCCCTTaGTGTCAAAGGAAGTTCATT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYNNSLP*CQRKFI
Trigger: AATGAACTTCCTTTGACACCAAGGGAGACTGTTGTT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATTATTTCTGTTTGTGTaGTCTCAGAAGCACTTTCCT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPLFLFV*SQKHFP
Trigger: AGGAAAGTGCTTCTGAGACCACACAAACAGAAATAA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCGAATCAAGTCTCCATaGGTAGGCACAATAACAATG +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFRIKSP*VGTITM
Trigger: CATTGTTATTGTGCCTACCCATGGAGACTTGATTCG...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAATATCCTTGTTGAGCTaGAAGTTGTGGTATCTACAA +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPISLLS*KLWYLQ
Trigger: TTGTAGATACCACAACTTCCAGCTCAACAAGGATAT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTTAGTTATCACTATTaGGGGAGTGTCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRFSYHY*GSVRNF
Trigger: AAAGTTTCTGACACTCCCCCAATAGTGATAACTAAA...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTACAAAGGGCAAAGTTaGCTCTGTTGGAGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFYKGQS*LCWREK
Trigger: TTTCTCTCTCCAACAGAGCCAACTTTGCCCTTTGTA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTTCTCAGAAAGCCCATaGTTAGGAAGAATTCCTGAC +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFFSESP*LGRIPD
Trigger: GTCAGGAATTCTTCCTAACCATGGGCTTTCTGAGAA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTATGCCTCAGGGTGTGTaGAAATGTACACAATGTCAT +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFMPQGV*KCTQCH
Trigger: ATGACATTGTGTACATTTCCACACACCCTGAGGCAT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCCTGCTTTTAATTTaGGTTTCCAGAGTAGCAAGA +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFISLLLI*VSRVAR
Trigger: TCTTGCTACTCTGGAAACCCAAATTAAAAGCAGGGA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGACAAACACAACTGTATaGTACATAGGAAATTGTAGC +
Preference number: 4 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRTNTTV*YIGNCS
Trigger: GCTACAATTTCCTATGTACCATACAGTTGTGTTTGT...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTTGAACAGAATCTTGTaGCATTTCCATCCTCATTTT +
Preference number: 4 (lower is better)
Translates to: APITRASIHLEFIFISTGLNRIL*HFHPHF
Trigger: AAAATGAGGATGGAAATGCCACAAGATTCTGTTCAA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTATCATCTGAAATGCTaGCACTCACAACATAGGTGG +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLYHLKC*HSQHRW
Trigger: CCACCTATGTTGTGAGTGCCAGCATTTCAGATGATA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATCGAGTCTTCTGGATTTaGGATTTCACAGAATTCAGT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYRVFWI*DFTEFS
Trigger: ACTGAATTCTGTGAAATCCCAAATCCAGAAGACTCG...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGGAACAGGTAGCATTTaGTTACATGAGTACATTATT +
Preference number: 4 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHGTGSI*LHEYII
Trigger: AATAATGTACTCATGTAACCAAATGCTACCTGTTCC...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGGAACAGGTAGCATTTaGTTACATGAGTACATTATT +
Preference number: 4 (lower is better)
Translates to: VHYLVVICEILVHPSPEQGTGSI*LHEYII
Trigger: AATAATGTACTCATGTAACCAAATGCTACCTGTTCC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTTCGTAACAGCCGACTaGGATTTAATTGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLFVTAD*DLIAEV
Trigger: AACTTCAGCAATTAAATCTCAGTCGGCTGTTACGAA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTATGAGTAGATGCAGGTaGAGTCTTTTCCACTGTAAA +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFMSRCR*SLFHCK
Trigger: TTTACAGTGGAAAAGACTTCACCTGCATCTACTCAT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTATTAGCAAACCATGGTaGTGTCAATTTGGATACAGC +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFISKPW*CQFGYS
Trigger: GCTGTATCCAAATTGACATCACCATGGTTTGCTAAT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATGAGAGTCTCAGTGAATaGAATGGTGTTTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYESLSE*NGVSVR
Trigger: TCTGACAGAAACACCATTTCATTCACTGAGACTCTC...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATGTGTGCTTTCAGAAATaGAAGAGGCAACTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYVCFQK*KRQLKS
Trigger: TGACTTCAGTTGCCTCTTTCATTTCTGAAAGCACAC...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTACATTAACTGGCAATaGGGACATCTGGTAAATAGG +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLYINWQ*GHLVNR
Trigger: CCTATTTACCAGATGTCCTCATTGCCAGTTAATGTA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGATCTGCATGAGTAGGTaGAAGCATATTTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLICMSR*KHIFRN
Trigger: GTTCCTGAAAATATGCTTTCACCTACTCATGCAGAT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTGGAGACTATCTGCATaGGTAGGTGAAAGCATATTT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLWRLSA*VGESIF
Trigger: AAATATGCTTTCACCTACTCATGCAGATAGTCTCCA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATGAGGAAGTCATAACATaGGGGGCATTAGATACAGTT +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYEEVIT*GALDTV
Trigger: AACTGTATCTAATGCCCCTCATGTTATGACTTCCTC...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTAAAGGACGATATTGGTaGAGACACAGTTGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFKGRYW*RHSCCK
Trigger: TTTACAGCAACTGTGTCTTCACCAATATCGTCCTTT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGCTTTTATGATGACCTaGCAAACACAACTGTATGGT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLAFMMT*QTQLYG
Trigger: ACCATACAGTTGTGTTTGTCAGGTCATCATAAAAGC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGCTTTTATGATGACCTaGCAAACACAACTGTATGGT +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFAFMMT*QTQLYG
Trigger: ACCATACAGTTGTGTTTGTCAGGTCATCATAAAAGC...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATAATTCTCTCCGTCAGTaGTTTAGGCAAATATATGGA +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYNSLRQ*FRQIYG
Trigger: TCCATATATTTGCCTAAATCACTGACGGAGAGAATT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTAATGAACATATCATCTaGAATGCTGGCACTCACAAC +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFNEHII*NAGTHN
Trigger: GTTGTGAGTGCCAGCATTTCAGATGATATGTTCATT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGGGTCAGCTAAGTTTTaGATGAACATATCATCTGAA +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYGSAKF*MNISSE
Trigger: TTCAGATGATATGTTCATTCAAAACTTAGCTGACCC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTTCACAGAATTCAGTTaGACAAGAACAGTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLFTEFS*TRTVQN
Trigger: GTTCTGCACTGTTCTTGTTCAACTGAATTCTGTGAA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATGGAAGAGTTCTAATTTaGCCTTCACACCATCCCATA +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYGRVLI*PSHHPI
Trigger: TATGGGATGGTGTGAAGGGCAAATTAGAACTCTTCC...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR GCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTCAAAGGAAGTTCATTTaGAGGTTTTGTAGACATAGG +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIQRKFI*RFCRHR
Trigger: CCTATGTCTACAAAACCTGCAAATGAACTTCCTTTG...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATGTGTCCTAAGTGAATaGAAGTGTGAAAAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPCVLSE*KCEKVV
Trigger: TACAACTTTTTCACACTTGCATTCACTTAGGACACA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTGTGATCCTGGAAGGTaGCTCTATCATTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYCDPGR*LYHFCS
Trigger: ACTACAGAAATGATAGAGGCACCTTCCAGGATCACA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCTGTTTCATCAGCTTTaGAATTTCCAGGCTCTAGTT +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFLFHQL*NFQALV
Trigger: AACTAGAGCCTGGAAATTGCAAAGCTGATGAAACAG...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTCATTGCTTATTTCATaGAGATCAGAGGCGGAATTG +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLSLLIS*RSEAEL
Trigger: CAATTCCGCCTCTGATCTGCATGAAATAAGCAATGA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATGTCAGATTTGCTATCTaGCCAGAAAACTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYVRFAI*PENSIL
Trigger: CAAGATGGAGTTTTCTGGGCAGATAGCAAATCTGAC...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATAAATCTCAGGGTCTGTaGCTTCTTCATAGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYKSQGL*LLHRSE
Trigger: TTCACTCCTATGAAGAAGGCACAGACCCTGAGATTT...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTACATATCATCTGAAATaGTGGCACTCACAACATAGG +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFTYHLK*WHSQHR
Trigger: CCTATGTTGTGAGTGCCAGCATTTCAGATGATATGT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTATGTATGTCACCACTaGAACTCCCAGAAAAATGGA +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLYVCHH*NSQKNG
Trigger: TCCATTTTTCTGGGAGTTGCAGTGGTGACATACATA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAGTGGAGATGTTGTATTaGAATATGATATGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPVEMLY*NMIWLC
Trigger: ACACAACCATATCATATTCCAATACAACATCTCCAC...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATCATTGTTTCCAGAGGTaGAGATGTTGTATTGGAATA +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYHCFQR*RCCIGI
Trigger: TATTCCAATACAACATCTCCACCTCTGGAAACAATG...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTATTAGAAGGTGTAGGTaGTTGAAAGATTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIIRRCR*LKDFSS
Trigger: GCTACTGAAATCTTTCAACCACCTACACCTTCTAAT...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGATCAGTTGTTGCCAATaGAAATGCTGTCTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLISCCQ*KCCLVS
Trigger: AGAAACCAGACAGCATTTCCATTGGCAACAACTGAT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAATGGTGATGTCAATTTaGATACAGCTGTTGTATATC +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPMVMSI*IQLLYI
Trigger: GATATACAACAGCTGTATCCAAATTGACATCACCAT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGAACAACAGTCTCCCTTaGTGTCAAAGGAAGTTCATT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLNNSLP*CQRKFI
Trigger: AATGAACTTCCTTTGACACCAAGGGAGACTGTTGTT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTATTTCTGTTTGTGTaGTCTCAGAAGCACTTTCCT +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFILFLFV*SQKHFP
Trigger: AGGAAAGTGCTTCTGAGACCACACAAACAGAAATAA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATCGAATCAAGTCTCCATaGGTAGGCACAATAACAATG +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYRIKSP*VGTITM
Trigger: CATTGTTATTGTGCCTACCCATGGAGACTTGATTCG...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTGTGTACACGATATGTaGCAGATGAAGAAATGTGAC +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFCVHDM*QMKKCD
Trigger: GTCACATTTCTTCATCTGCCACATATCGTGTACACA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATAGGGATATGGTCATCTaGTCTTTGTCGGAAGATAAG +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYRDMVI*SLSEDK
Trigger: CTTATCTTCCGACAAAGACCAGATGACCATATCCCT...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATTTAGTTATCACTATTaGGGGAGTGTCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPFSYHY*GSVRNF
Trigger: AAAGTTTCTGACACTCCCCCAATAGTGATAACTAAA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATATAACCCAACTCTTGTaGAAGTGTCAGAAGAGACTG +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYITQLL*KCQKRL
Trigger: CAGTCTCTTCTGACACTTCCACAAGAGTTGGGTTAT...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGGGTATTCAAAGATGTaGCATAGTTTGTTAAGGAAG +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYGYSKM*HSLLRK
Trigger: CTTCCTTAACAAACTATGCCACATCTTTGAATACCC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGGGTATTCAAAGATGTaGCATAGTTTGTTAAGGAAG +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIGYSKM*HSLLRK
Trigger: CTTCCTTAACAAACTATGCCACATCTTTGAATACCC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTTCTCAGAAAGCCCATaGTTAGGAAGAATTCCTGAC +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYFSESP*LGRIPD
Trigger: GTCAGGAATTCTTCCTAACCATGGGCTTTCTGAGAA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTTACAGATCCTGAAGTaGCACCAGAAAGAATTGATG +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFLQILK*HQKELM
Trigger: CATCAATTCTTTCTGGTGCCACTTCAGGATCTGTAA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGAGAGCCATGTCAGAATaGGTGACTTTGAAATTACAG +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLRAMSE*VTLKLQ
Trigger: CTGTAATTTCAAAGTCACCCATTCTGACATGGCTCT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTCCCTGCTTTTAATTTaGGTTTCCAGAGTAGCAAGA +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFSLLLI*VSRVAR
Trigger: TCTTGCTACTCTGGAAACCCAAATTAAAAGCAGGGA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTTCTTTACCCAGGGCTaGGGATTCATTTATCAAATT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYFFTQG*GFIYQI
Trigger: AATTTGATAAATGAATCCCCAGCCCTGGGTAAAGAA...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTCTAAGTCTGAGAACTaGACTCTTTTAACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFSKSEN*TLLTSH
Trigger: GTGGGAAGTTAAAAGAGTCCAGTTCTCAGACTTAGA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394141.1
CDS-3UTR TCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTGGAGACTATCTGCATaGGTAGGTGAAAGCATATTT +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYWRLSA*VGESIF
Trigger: AAATATGCTTTCACCTACTCATGCAGATAGTCTCCA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTGGAATTCTGTTCCATaGAGATGTTATTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFWNSVP*RCYCRA
Trigger: AGCTCTACAATAACATCTTCATGGAACAGAATTCCA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTAATTCTCTCCGTCAGTaGTTTAGGCAAATATATGGA +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFNSLRQ*FRQIYG
Trigger: TCCATATATTTGCCTAAATCACTGACGGAGAGAATT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGGGTCAGCTAAGTTTTaGATGAACATATCATCTGAA +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFGSAKF*MNISSE
Trigger: TTCAGATGATATGTTCATTCAAAACTTAGCTGACCC...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATCAAACTCCCACTTTCTaGAATGATGACAACCAAGAA +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYQTPTF*NDDNQE
Trigger: TTCTTGGTTGTCATCATTTCAGAAAGTGGGAGTTTG...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR TCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTTCACAGAATTCAGTTaGACAAGAACAGTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYFTEFS*TRTVQN
Trigger: GTTCTGCACTGTTCTTGTTCAACTGAATTCTGTGAA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGGTTGTGTAATCAGTTaGAAATATAGGTATGCTTTG +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYGCVIS*KYRYAL
Trigger: CAAAGCATACCTATATTTGCAACTGATTACACAACC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTCTCACCTCAGTTGTTaGAGTTTTATTATCCAATGG +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLSHLSC*SFIIQW
Trigger: CCATTGGATAATAAAACTGCAACAACTGAGGTGAGA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATAGATATTGGTTGAGTTaGTTCTGGTGTAGACGTAGT +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYRYWLS*FWCRRS
Trigger: ACTACGTCTACACCAGAAGCAACTCAACCAATATCT...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTCATTGCTTATTTCATaGAGATCAGAGGCGGAATTG +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYSLLIS*RSEAEL
Trigger: CAATTCCGCCTCTGATCTGCATGAAATAAGCAATGA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTCCTCAGAATTTCATTaGTTATTTCATGCAGATCAG +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYSSEFH*LFHADQ
Trigger: CTGATCTGCATGAAATAAGCAATGAAATTCTGAGGA...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTATGTATGTCACCACTaGAACTCCCAGAAAAATGGA +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYYVCHH*NSQKNG
Trigger: TCCATTTTTCTGGGAGTTGCAGTGGTGACATACATA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGTGGAGATGTTGTATTaGAATATGATATGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: DFGAPITRASIHLEFIFIVEMLY*NMIWLC
Trigger: ACACAACCATATCATATTCCAATACAACATCTCCAC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCATTGTTTCCAGAGGTaGAGATGTTGTATTGGAATA +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFHCFQR*RCCIGI
Trigger: TATTCCAATACAACATCTCCACCTCTGGAAACAATG...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGCATTGTTTCCAGAGGTaGAGATGTTGTATTGGAATA +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLHCFQR*RCCIGI
Trigger: TATTCCAATACAACATCTCCACCTCTGGAAACAATG...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTATTAGAAGGTGTAGGTaGTTGAAAGATTTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFIRRCR*LKDFSS
Trigger: GCTACTGAAATCTTTCAACCACCTACACCTTCTAAT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGACTGGAAATTTTTGTaGTCTCAGGAAATCCTGTAT +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFDWKFL*SQEILY
Trigger: ATACAGGATTTCCTGAGACCACAAAAATTTCCAGTC...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGACTGGAAATTTTTGTaGTCTCAGGAAATCCTGTAT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLDWKFL*SQEILY
Trigger: ATACAGGATTTCCTGAGACCACAAAAATTTCCAGTC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTAGTGAGTCACATAGGTaGAGTTTACTATCATTTCCA +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFSESHR*SLLSFP
Trigger: TGGAAATGATAGTAAACTCCACCTATGTGACTCACT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGATATCCTTGTTGAGCTaGAAGTTGTGGTATCTACAA +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLISLLS*KLWYLQ
Trigger: TTGTAGATACCACAACTTCCAGCTCAACAAGGATAT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGAAAGCTAGTCAGAGATaGGGAAACCTGAATATTGAA +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLKASQR*GNLNIE
Trigger: TTCAATATTCAGGTTTCCCCATCTCTGACTAGCTTT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTAAAGCTAGTCAGAGATaGGGAAACCTGAATATTGAA +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFKASQR*GNLNIE
Trigger: TTCAATATTCAGGTTTCCCCATCTCTGACTAGCTTT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTCTTGTTCCCAGAACTaGAAATTCAACCATTTGGGA +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYSCSQN*KFNHLG
Trigger: TCCCAAATGGTTGAATTTCCAGTTCTGGGAACAAGA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATAATAGTGGTGGAAATTaGAAACTGAGAACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYNSGGN*KLRTFS
Trigger: GCTGAAGGTTCTCAGTTTCCAATTTCCACCACTATT...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCAGGAGTTACAGATGTaGTCATTTTCTCAAATGTGT +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFQELQM*SFSQMC
Trigger: ACACATTTGAGAAAATGACCACATCTGTAACTCCTG...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTTACAGATCCTGAAGTaGCACCAGAAAGAATTGATG +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYLQILK*HQKELM
Trigger: CATCAATTCTTTCTGGTGCCACTTCAGGATCTGTAA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATAGAGCCATGTCAGAATaGGTGACTTTGAAATTACAG +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYRAMSE*VTLKLQ
Trigger: CTGTAATTTCAAAGTCACCCATTCTGACATGGCTCT...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTTCTTTACCCAGGGCTaGGGATTCATTTATCAAATT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLFFTQG*GFIYQI
Trigger: AATTTGATAAATGAATCCCCAGCCCTGGGTAAAGAA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGGAACAGGTAGCATTTaGTTACATGAGTACATTATT +
Preference number: 4 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYGTGSI*LHEYII
Trigger: AATAATGTACTCATGTAACCAAATGCTACCTGTTCC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGGTTGTGTAATCAGTTaGAAATATAGGTATGCTTTG +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFGCVIS*KYRYAL
Trigger: CAAAGCATACCTATATTTGCAACTGATTACACAACC...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATCAAAGGAAGTTCATTTaGAGGTTTTGTAGACATAGG +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYQRKFI*RFCRHR
Trigger: CCTATGTCTACAAAACCTGCAAATGAACTTCCTTTG...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR GCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTGTGTCCTAAGTGAATaGAAGTGTGAAAAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLCVLSE*KCEKVV
Trigger: TACAACTTTTTCACACTTGCATTCACTTAGGACACA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGTGGAGATGTTGTATTaGAATATGATATGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFVEMLY*NMIWLC
Trigger: ACACAACCATATCATATTCCAATACAACATCTCCAC...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTATGGTGATGTCAATTTaGATACAGCTGTTGTATATC +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFMVMSI*IQLLYI
Trigger: GATATACAACAGCTGTATCCAAATTGACATCACCAT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTATTGGTTATGGATGTaGTTCCAGAAACTATGGAGA +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYYWLWM*FQKLWR
Trigger: TCTCCATAGTTTCTGGAACCACATCCATAACCAATA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTTGAGCTGGAAGTTGTaGTATCTACAAATGAAGTAT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLLSWKL*YLQMKY
Trigger: ATACTTCATTTGTAGATACCACAACTTCCAGCTCAA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTTGAGCTGGAAGTTGTaGTATCTACAAATGAAGTAT +
Preference number: 4 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFLSWKL*YLQMKY
Trigger: ATACTTCATTTGTAGATACCACAACTTCCAGCTCAA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATGTCATAAGCAGAGGTTaGGTATTACTAGATGTCATT +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYVISRG*VLLDVI
Trigger: AATGACATCTAGTAATACCCAACCTCTGCTTATGAC...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATCAGGAGTTACAGATGTaGTCATTTTCTCAAATGTGT +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYQELQM*SFSQMC
Trigger: ACACATTTGAGAAAATGACCACATCTGTAACTCCTG...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGACAAACACAACTGTATaGTACATAGGAAATTGTAGC +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLTNTTV*YIGNCS
Trigger: GCTACAATTTCCTATGTACCATACAGTTGTGTTTGT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTTGAACAGAATCTTGTaGCATTTCCATCCTCATTTT +
Preference number: 4 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLLNRIL*HFHPHF
Trigger: AAAATGAGGATGGAAATGCCACAAGATTCTGTTCAA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTTGAGCTGGAAGTTGTaGTATCTACAAATGAAGTAT +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYLSWKL*YLQMKY
Trigger: ATACTTCATTTGTAGATACCACAACTTCCAGCTCAA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CCA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTTTAGTTATCACTATTaGGGGAGTGTCAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYFSYHY*GSVRNF
Trigger: AAAGTTTCTGACACTCCCCCAATAGTGATAACTAAA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS GCA 90 bp TGTAAAGTGCTTGGCCCAGCGCCTAGCACCAGGTTCCAGCACCACTaGTTCTGTCAAGGACTCCACTGCTTCTTCTTTCCAGTAGGCACA +
Preference number: 5 (lower is better)
Translates to: CKVLGPAPSTRFQHH*FCQGLHCFFFPVGT
Trigger: TGTGCCTACTGGAAAGAAGAAGCAGTGGAGTCCTTGACAGAAGCAGTGGTGCTGGAACCTGGTGCTAGGCGCTGGGCCAAGCACTTTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS CCA 90 bp TTTCCAGTAGGCACAAGGCTTAGGTTTTGTGACCTGTCCCCAACGTaGGGTCACACAGCCTGGGAGGGCTTCAACGGGTATCTTCCATTC +
Preference number: 5 (lower is better)
Translates to: FPVGTRLRFCDLSPT*GHTAWEGFNGYLPF
Trigger: GAATGGAAGATACCCGTTGAAGCCCTCCCAGGCTGTGTGACCCCACGTTGGGGACAGGTCACAAAACCTAAGCCTTGTGCCTACTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394143.6
CDS CCA 90 bp TGGTCTGGCCTAGAAGTCCAAATGGTCTCATTGCTGGAGAACAGATaGGCAGCTTCATCAGTTGTGGATGTGGGACCTGACTCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: WSGLEVQMVSLLENR*AASSVVDVGPDSGA
Trigger: GGCACCTGAGTCAGGTCCCACATCCACAACTGATGAAGCTGCCCATCTGTTCTCCAGCAATGAGACCATTTGGACTTCTAGGCCAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS GCA 90 bp CCTAGCACCAGGTTCCAGCACCACTGCTTCTGTCAAGGACTCCACTaGTTCTTCTTTCCAGTAGGCACAAGGCTTAGGTTTTGTGACCTG +
Preference number: 5 (lower is better)
Translates to: PSTRFQHHCFCQGLH*FFFPVGTRLRFCDL
Trigger: CAGGTCACAAAACCTAAGCCTTGTGCCTACTGGAAAGAAGAAGCAGTGGAGTCCTTGACAGAAGCAGTGGTGCTGGAACCTGGTGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS CCA 90 bp TGTGAGTATGGTGGTTGTGTTCATAGATGCCAGCAGGGCCTGGTCTaGCCTAGAAGTCCAAATGGTCTCATTGCTGGAGAACAGATGGGC +
Preference number: 5 (lower is better)
Translates to: CEYGGCVHRCQQGLV*PRSPNGLIAGEQMG
Trigger: GCCCATCTGTTCTCCAGCAATGAGACCATTTGGACTTCTAGGCCAGACCAGGCCCTGCTGGCATCTATGAACACAACCACCATACTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 90 bp GGGTCACACAGCCTGGGAGGGCTTCAACGGGTATCTTCCATTCCCTaGAAGGTTATGAGGAGAATGTTGACCATCTGCTCTCCATATCCA +
Preference number: 5 (lower is better)
Translates to: GSHSLGGLQRVSSIP*KVMRRMLTICSPYP
Trigger: TGGATATGGAGAGCAGATGGTCAACATTCTCCTCATAACCTTCCAGGGAATGGAAGATACCCGTTGAAGCCCTCCCAGGCTGTGTGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394143.6
CDS CCA 90 bp AAATGGTCTCATTGCTGGAGAACAGATGGGCAGCTTCATCAGTTGTaGATGTGGGACCTGACTCAGGTGCCTTGGATGTGGAAGCTGATC +
Preference number: 5 (lower is better)
Translates to: KWSHCWRTDGQLHQL*MWDLTQVPWMWKLI
Trigger: GATCAGCTTCCACATCCAAGGCACCTGAGTCAGGTCCCACATCCACAACTGATGAAGCTGCCCATCTGTTCTCCAGCAATGAGACCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 90 bp CCCAGCCATAATGGTGGTGGGAACGGTTTTTACAAAGGGCAAAGTTaGCTCTGTTGGAGAGAGAAAGGTCGTAGGTGTGATCCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: PSHNGGGNGFYKGQS*LCWREKGRRCDPGR
Trigger: CCTTCCAGGATCACACCTACGACCTTTCTCTCTCCAACAGAGCCAACTTTGCCCTTTGTAAAAACCGTTCCCACCACCATTATGGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 90 bp GGACGTAGCTGTCCTGTCTGTAGGGGTAGTGGAGAAACTGGTTTCTaGTATCCTTGTGGTAGAAGCACCCAGGGGTTCACCGAATATATG +
Preference number: 5 (lower is better)
Translates to: GRSCPVCRGSGETGF*YPCGRSTQGFTEYM
Trigger: CATATATTCGGTGAACCCCTGGGTGCTTCTACCACAAGGATATCAGAAACCAGTTTCTCCACTACCCCTACAGACAGGACAGCTACGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 90 bp GTGGTCTCAGCCTTAGCTGTCACAGGAGTGGAGAGTCTCAGTGAATaGAATGGTGTTTCTGTCAGAGAAGGAACTGCCATGGATGTCTTC +
Preference number: 5 (lower is better)
Translates to: VVSALAVTGVESLSE*NGVSVREGTAMDVF
Trigger: GAAGACATCCATGGCAGTTCCTTCTCTGACAGAAACACCATTTCATTCACTGAGACTCTCCACTCCTGTGACAGCTAAGGCTGAGACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 90 bp AAGGGTGGTCTCAGCCTTAGCTGTCACAGGAGTGGAGAGTCTCAGTaGATGAAATGGTGTTTCTGTCAGAGAAGGAACTGCCATGGATGT +
Preference number: 5 (lower is better)
Translates to: KGGLSLSCHRSGESQ*MKWCFCQRRNCHGC
Trigger: ACATCCATGGCAGTTCCTTCTCTGACAGAAACACCATTTCATTCACTGAGACTCTCCACTCCTGTGACAGCTAAGGCTGAGACCACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 90 bp CTCTACTTGAGATATTGGTTGAGTTGCTTCTGGTGTAGACGTAGTTaGGATCACATGAGTGGAGGACGCAGGAGGAATGTTGTCAGGGGG +
Preference number: 5 (lower is better)
Translates to: LYLRYWLSCFWCRRS*DHMSGGRRRNVVRG
Trigger: CCCCCTGACAACATTCCTCCTGCGTCCTCCACTCATGTGATCTCAACTACGTCTACACCAGAAGCAACTCAACCAATATCTCAAGTAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS GCA 90 bp GTGAGGCCAAGTAAGAATGTCAGGCTCATTGTGCCTTTGAGGTCATaGAGGATCATCTTCCGCCGAGTCTTCTGGATTTGGGATTTCACA +
Preference number: 5 (lower is better)
Translates to: VRPSKNVRLIVPLRS*RIIFRRVFWIWDFT
Trigger: TGTGAAATCCCAAATCCAGAAGACTCGGCGGAAGATGATCCTGCATGACCTCAAAGGCACAATGAGCCTGACATTCTTACTTGGCCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 90 bp GTAAACCAAGGTACAGTTCCGGCAGCTGTAGATTCAATGAACTCCTaGCCAGCTGTGGAGATAGGGAGTGCCCCAGTATTTGTGGATTTT +
Preference number: 5 (lower is better)
Translates to: VNQGTVPAAVDSMNS*PAVEIGSAPVFVDF
Trigger: AAAATCCACAAATACTGGGGCACTCCCTATCTCCACAGCTGGCCAGGAGTTCATTGAATCTACAGCTGCCGGAACTGTACCTTGGTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 90 bp GTCACCTCCATAGTTCTAGGGGTTTTTCCCAGGGATATGGTCATCTaGTCTTTGTCGGAAGATAAGACAGAGGTGCTAGTCACCAACTGG +
Preference number: 5 (lower is better)
Translates to: VTSIVLGVFPRDMVI*SLSEDKTEVLVTNW
Trigger: CCAGTTGGTGACTAGCACCTCTGTCTTATCTTCCGACAAAGACCAGATGACCATATCCCTGGGAAAAACCCCTAGAACTATGGAGGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 90 bp AATGGTGGTGGGAACGGTTTTTACAAAGGGCAAAGTTGGCTCTGTTaGAGAGAGAAAGGTCGTAGGTGTGATCCTGGAAGGTGCCTCTAT +
Preference number: 5 (lower is better)
Translates to: NGGGNGFYKGQSWLC*REKGRRCDPGRCLY
Trigger: ATAGAGGCACCTTCCAGGATCACACCTACGACCTTTCTCTCTCCAACAGAGCCAACTTTGCCCTTTGTAAAAACCGTTCCCACCACCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 90 bp AGTGCTCTTAGAACTGAGTGGAGAGAAGGCAGTGGTGCCTACAAATaGAGTCACTATCCCAGCCATAATGGTGGTGGGAACGGTTTTTAC +
Preference number: 5 (lower is better)
Translates to: SALRTEWREGSGAYK*SHYPSHNGGGNGFY
Trigger: GTAAAAACCGTTCCCACCACCATTATGGCTGGGATAGTGACTCCATTTGTAGGCACCACTGCCTTCTCTCCACTCAGTTCTAAGAGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 90 bp ATGAAGGATGAGACACAGTCCTGGGGTTGGCAGTTATTGTGGTTCTaGAGGATGCCTCAGGGTGTGTGGAAATGTACACAATGTCATCTG +
Preference number: 5 (lower is better)
Translates to: MKDETQSWGWQLLWF*RMPQGVWKCTQCHL
Trigger: CAGATGACATTGTGTACATTTCCACACACCCTGAGGCATCCTCCAGAACCACAATAACTGCCAACCCCAGGACTGTGTCTCATCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 90 bp GAGATGAGCACAGGCTCAGGTGGGAATGATGATGCAGTCCCAACATaGGTAGATGCAGGTGAAGTCTTTTCCACTGTAAACCAAGGTACA +
Preference number: 5 (lower is better)
Translates to: EMSTGSGGNDDAVPT*VDAGEVFSTVNQGT
Trigger: TGTACCTTGGTTTACAGTGGAAAAGACTTCACCTGCATCTACTCATGTTGGGACTGCATCATCATTCCCACCTGAGCCTGTGCTCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 90 bp AGGAACTGCCATGGATGTCTTCCTGACAGAGATTACCGTGGCCTCTaGAGTGGTACGAATCAAGTCTCCATGGGTAGGCACAATAACAAT +
Preference number: 5 (lower is better)
Translates to: RNCHGCLPDRDYRGL*SGTNQVSMGRHNNN
Trigger: ATTGTTATTGTGCCTACCCATGGAGACTTGATTCGTACCACTTCAGAGGCCACGGTAATCTCTGTCAGGAAGACATCCATGGCAGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 90 bp GAAATGGTGTTTCTGTCAGAGAAGGAACTGCCATGGATGTCTTCCTaGCAGAGATTACCGTGGCCTCTGAAGTGGTACGAATCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: EMVFLSEKELPWMSS*QRLPWPLKWYESSL
Trigger: GAGACTTGATTCGTACCACTTCAGAGGCCACGGTAATCTCTGTCAGGAAGACATCCATGGCAGTTCCTTCTCTGACAGAAACACCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS GCA 90 bp ATGAGACACAGTCCTGGGGTTGGCAGTTATTGTGGTTCTGGAGGATaGCTCAGGGTGTGTGGAAATGTACACAATGTCATCTGTGACATT +
Preference number: 5 (lower is better)
Translates to: MRHSPGVGSYCGSGG*LRVCGNVHNVICDI
Trigger: AATGTCACAGATGACATTGTGTACATTTCCACACACCCTGAGGCATCCTCCAGAACCACAATAACTGCCAACCCCAGGACTGTGTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 90 bp GCCAGTAGCCAAGCTGGCAACAACTCCACCACCACTGAAAGTATATaGGAAGCTGAGAGCATAGGTAGAAGTCTCCTCTACTTGAGATAT +
Preference number: 5 (lower is better)
Translates to: ASSQAGNNSTTTESI*EAESIGRSLLYLRY
Trigger: ATATCTCAAGTAGAGGAGACTTCTACCTATGCTCTCAGCTTCCCATATACTTTCAGTGGTGGTGGAGTTGTTGCCAGCTTGGCTACTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 90 bp CAGAGTGAGTCACATAGGTGGAGTTTACTATCATTTCCACAGTCCTaGGAGTATATGCTGGAAGGGCACTCGTGCTTTCCTTTTCAGGAC +
Preference number: 5 (lower is better)
Translates to: QSESHRWSLLSFPQS*EYMLEGHSCFPFQD
Trigger: GTCCTGAAAAGGAAAGCACGAGTGCCCTTCCAGCATATACTCCCAGGACTGTGGAAATGATAGTAAACTCCACCTATGTGACTCACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGGGCAGCTTCATCAGTaGTGGATGTGGGACCTGACT +
Preference number: 5 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHGQLHQ*WMWDLT
Trigger: AGTCAGGTCCCACATCCACAACTGATGAAGCTGCCC...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGGGGCAGCTTCATCAGTaGTGGATGTGGGACCTGACT +
Preference number: 5 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRGQLHQ*WMWDLT
Trigger: AGTCAGGTCCCACATCCACAACTGATGAAGCTGCCC...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTTCCCCAATCAGGGGTaGGGAGGAGGCAAGTATCTC +
Preference number: 5 (lower is better)
Translates to: APITRASIHLEFIFISTGFPNQG*GGGKYL
Trigger: GAGATACTTGCCTCCTCCCAACCCCTGATTGGGGAA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS TCA 90 bp AGAAGAGACTGTTGCAGGTGTGAAAGCAGAGTTATTAACTGGTATTaGGGACATCTCAGACATAGGCCCAGAAGTGGCTGTACAGGGACT +
Preference number: 5 (lower is better)
Translates to: RRDCCRCESRVINWY*GHLRHRPRSGCTGT
Trigger: AGTCCCTGTACAGCCACTTCTGGGCCTATGTCTGAGATGTCCTCAATACCAGTTAATAACTCTGCTTTCACACCTGCAACAGTCTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 90 bp TCAGTTGTAGAAGGTGACATAGTCTTTCTGCTGAAGGATGAAGGATaGGACACAGTCCTGGGGTTGGCAGTTATTGTGGTTCTGGAGGAT +
Preference number: 5 (lower is better)
Translates to: SVVEGDIVFLLKDEG*DTVLGLAVIVVLED
Trigger: ATCCTCCAGAACCACAATAACTGCCAACCCCAGGACTGTGTCTCATCCTTCATCCTTCAGCAGAAAGACTATGTCACCTTCTACAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 90 bp ATCTGGTCTTTGTCGGAAGATAAGACAGAGGTGCTAGTCACCAACTaGATGGACACTGGTGTGTGTACACGATATGTGGCAGATGAAGAA +
Preference number: 5 (lower is better)
Translates to: IWSLSEDKTEVLVTN*MDTGVCTRYVADEE
Trigger: TTCTTCATCTGCCACATATCGTGTACACACACCAGTGTCCATCCAGTTGGTGACTAGCACCTCTGTCTTATCTTCCGACAAAGACCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACCCTGACTCAGGTGCCTaGGATGTGGAAGCTGATCTA +
Preference number: 5 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHPDSGA*DVEADL
Trigger: TAGATCAGCTTCCACATCCAAGGCACCTGAGTCAGG...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTGGCAGTGGTACCTTaGCCCTCTGGAGATGCTTTC +
Preference number: 5 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRLAVVP*PSGDAF
Trigger: GAAAGCATCTCCAGAGGGCAAAGGTACCACTGCCAA...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGCTGTAGTAGCATCATaGGCAGTGGTACCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: VHYLVVICEILVHPSPEQAVVAS*AVVPLP
Trigger: GGGCAAAGGTACCACTGCCAATGATGCTACTACAGC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGGCTGTAGTAGCATCATaGGCAGTGGTACCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRAVVAS*AVVPLP
Trigger: GGGCAAAGGTACCACTGCCAATGATGCTACTACAGC...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTGGGGTTGGCAGTTATaGTGGTTCTGGAGGATGCCT +
Preference number: 5 (lower is better)
Translates to: APITRASIHLEFIFISTGWGWQL*WFWRMP
Trigger: AGGCATCCTCCAGAACCACAATAACTGCCAACCCCA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGACACAGTCCTGGGGTaGGCAGTTATTGTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: HYLVVICEILVHPSPEQVDTVLG*AVIVVL
Trigger: CAGAACCACAATAACTGCCAACCCCAGGACTGTGTC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGACACAGTCCTGGGGTaGGCAGTTATTGTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: VHYLVVICEILVHPSPEQDTVLG*AVIVVL
Trigger: CAGAACCACAATAACTGCCAACCCCAGGACTGTGTC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAAAGGAAACTGTGGACTaGGTGGCAGTAGGCGAAGTC +
Preference number: 5 (lower is better)
Translates to: HYLVVICEILVHPSPEQVKETVD*VAVGEV
Trigger: GACTTCGCCTACTGCCACCAAGTCCACAGTTTCCTT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTAAGGAAACTGTGGACTaGGTGGCAGTAGGCGAAGTC +
Preference number: 5 (lower is better)
Translates to: APITRASIHLEFIFISTGKETVD*VAVGEV
Trigger: GACTTCGCCTACTGCCACCAAGTCCACAGTTTCCTT...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 90 bp AAGTCTCCATGGGTAGGCACAATAACAATGGTTGTGGAAGCAGTCTaGTCCAAAGGTGGTACCAATGCTGTGGTCATTGTAGTTGAGGAT +
Preference number: 5 (lower is better)
Translates to: KSPWVGTITMVVEAV*SKGGTNAVVIVVED
Trigger: ATCCTCAACTACAATGACCACAGCATTGGTACCACCTTTGGATCAGACTGCTTCCACAACCATTGTTATTGTGCCTACCCATGGAGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS GCA 90 bp AGCTGTAGATTCAATGAACTCCTGGCCAGCTGTGGAGATAGGGAGTaGCCCAGTATTTGTGGATTTTTGTTTGAGACAAGGTGTTGTAGA +
Preference number: 5 (lower is better)
Translates to: SCRFNELLASCGDRE*PSICGFLFETRCCR
Trigger: TCTACAACACCTTGTCTCAAACAAAAATCCACAAATACTGGGGCACTCCCTATCTCCACAGCTGGCCAGGAGTTCATTGAATCTACAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS GCA 90 bp TGGCTCTGTTGGAGAGAGAAAGGTCGTAGGTGTGATCCTGGAAGGTaGCTCTATCATTTCTGTAGTGAAAGCAGAGGAAACCATTTTGTT +
Preference number: 5 (lower is better)
Translates to: WLCWREKGRRCDPGR*LYHFCSESRGNHFV
Trigger: AACAAAATGGTTTCCTCTGCTTTCACTACAGAAATGATAGAGGCACCTTCCAGGATCACACCTACGACCTTTCTCTCTCCAACAGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 90 bp TGTCATATTTTCAGGAACAAAGCAGCGCAGTGTCCTGTCAACAGTTaGGATGATCTTGTTGACAAGCCAGACGTCTTCTTCCCAACTAAC +
Preference number: 5 (lower is better)
Translates to: CHIFRNKAAQCPVNS*DDLVDKPDVFFPTN
Trigger: GTTAGTTGGGAAGAAGACGTCTGGCTTGTCAACAAGATCATCCCAACTGTTGACAGGACACTGCGCTGCTTTGTTCCTGAAAATATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACCTGACTCAGGTGCCTaGGATGTGGAAGCTGATCTA +
Preference number: 5 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPPDSGA*DVEADL
Trigger: TAGATCAGCTTCCACATCCAAGGCACCTGAGTCAGG...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTCCAAATGGTCTCATaGCTGGAGAACAGATGGGCA +
Preference number: 5 (lower is better)
Translates to: VHYLVVICEILVHPSPEQVQMVS*LENRWA
Trigger: TGCCCATCTGTTCTCCAGCAATGAGACCATTTGGAC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATTGGCAGTGGTACCTTaGCCCTCTGGAGATGCTTTC +
Preference number: 5 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPLAVVP*PSGDAF
Trigger: GAAAGCATCTCCAGAGGGCAAAGGTACCACTGCCAA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGTGTTGTTGCTGACTTaGGTACAGGGGTCGTTGTAC +
Preference number: 5 (lower is better)
Translates to: HYLVVICEILVHPSPEQVVLLLT*VQGSLY
Trigger: GTACAACGACCCCTGTACCAAAGTCAGCAACAACAC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTCCTCCCACAGGGACATaGCCTAGGAAAATCTCAGGG +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFIPPTGT*PRKISG
Trigger: CCCTGAGATTTTCCTAGGCAATGTCCCTGTGGGAGG...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAAGGCTCATTGTGCCTTaGAGGTCATGCAGGATCATC +
Preference number: 5 (lower is better)
Translates to: VHYLVVICEILVHPSPEQRLIVP*RSCRII
Trigger: GATGATCCTGCATGACCTCAAAGGCACAATGAGCCT...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAAGGCTCATTGTGCCTTaGAGGTCATGCAGGATCATC +
Preference number: 5 (lower is better)
Translates to: HYLVVICEILVHPSPEQVRLIVP*RSCRII
Trigger: GATGATCCTGCATGACCTCAAAGGCACAATGAGCCT...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 90 bp GCCCTTCACACCATCCCATATCAAGCATATTGTATGCCATTGAAATaGAGCCAGGTGGTGACGGATAGAAAAGGTCTTTCCCAATCTGTA +
Preference number: 5 (lower is better)
Translates to: ALHTIPYQAYCMPLK*SQVVTDRKGLSQSV
Trigger: TACAGATTGGGAAAGACCTTTTCTATCCGTCACCACCTGGCTTCATTTCAATGGCATACAATATGCTTGATATGGGATGGTGTGAAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS TCA 90 bp CCTTGGGGCAGGTGTGGTCTCAATAAGCCTAGTTGGGAGAGTCAATaGATGGACTGTAAATGCTATTTTCATATCAGTTGTTGCCAATGG +
Preference number: 5 (lower is better)
Translates to: PWGRCGLNKPSWESQ*MDCKCYFHISCCQW
Trigger: CCATTGGCAACAACTGATATGAAAATAGCATTTACAGTCCATTCATTGACTCTCCCAACTAGGCTTATTGAGACCACACCTGCCCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 90 bp AAGACTGGTAGACATTTCTGGAATGTGAACACCTACTGTGTTACTTaGGGTCAAGGTTGGTGTAATCTGTGTGCTTCCAGAAGTGGGAGA +
Preference number: 5 (lower is better)
Translates to: KTGRHFWNVNTYCVT*GQGWCNLCASRSGR
Trigger: TCTCCCACTTCTGGAAGCACACAGATTACACCAACCTTGACCTCAAGTAACACAGTAGGTGTTCACATTCCAGAAATGTCTACCAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 90 bp GGACGTTGCCATAGAGGATTCTCTAGGAAGCATTGTAGGTACATTTaGAACAGAAAAGGCTGTAGTGATCCTGTCGGAGAGAACTGTAAA +
Preference number: 5 (lower is better)
Translates to: GRCHRGFSRKHCRYI*NRKGCSDPVGENCK
Trigger: TTTACAGTTCTCTCCGACAGGATCACTACAGCCTTTTCTGTTCCAAATGTACCTACAATGCTTCCTAGAGAATCCTCTATGGCAACGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTCCTGACTCAGGTGCCTaGGATGTGGAAGCTGATCTA +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFIPDSGA*DVEADL
Trigger: TAGATCAGCTTCCACATCCAAGGCACCTGAGTCAGG...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAGTCCAAATGGTCTCATaGCTGGAGAACAGATGGGCA +
Preference number: 5 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPVQMVS*LENRWA
Trigger: TGCCCATCTGTTCTCCAGCAATGAGACCATTTGGAC...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGTCAGGGGGAGGTTTaGAGCAGACAAGAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFICQGEV*SRQECV
Trigger: CACACACTCTTGTCTGCTCAAAACCTCCCCCTGACA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCAAAGAGGGTAGAGTaGCACTGGATGGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFISKRVE*HWMGSM
Trigger: CATGGACCCCATCCAGTGCAACTCTACCCTCTTTGA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTCAAAGAGGGTAGAGTaGCACTGGATGGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYSKRVE*HWMGSM
Trigger: CATGGACCCCATCCAGTGCAACTCTACCCTCTTTGA...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATGGAAATTCAACCATTaGGGATGTGGGAGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: HYLVVICEILVHPSPEQVWKFNH*GCGRRR
Trigger: TCTCCTCCTCCCACATCCCAAATGGTTGAATTTCCA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGGGGTTGGCAGTTATaGTGGTTCTGGAGGATGCCT +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFIWGWQL*WFWRMP
Trigger: AGGCATCCTCCAGAACCACAATAACTGCCAACCCCA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAATTTTATGCATCTGGTTaGGGCTGTCTCCGTAGGGTT +
Preference number: 5 (lower is better)
Translates to: VHYLVVICEILVHPSPEQFYASG*GCLRRV
Trigger: AACCCTACGGAGACAGCCCAAACCAGATGCATAAAA...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTTTTATGCATCTGGTTaGGGCTGTCTCCGTAGGGTT +
Preference number: 5 (lower is better)
Translates to: APITRASIHLEFIFISTGFYASG*GCLRRV
Trigger: AACCCTACGGAGACAGCCCAAACCAGATGCATAAAA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATCGGCCACCGTCAGATTaGCTATCTGCCCAGAAAACT +
Preference number: 5 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYRPPSD*LSAQKT
Trigger: AGTTTTCTGGGCAGATAGCAAATCTGACGGTGGCCG...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCTCCCACAGGGACATaGCCTAGGAAAATCTCAGGG +
Preference number: 5 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFPPTGT*PRKISG
Trigger: CCCTGAGATTTTCCTAGGCAATGTCCCTGTGGGAGG...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGTGCTGTGCACAGGTaGATCAGAATTTTGGCAGGA +
Preference number: 5 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHSAVHR*IRILAG
Trigger: TCCTGCCAAAATTCTGATCAACCTGTGCACAGCACT...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTCCAACAAAACGGAGTaGTTGGGCTCAGAGTTCCAT +
Preference number: 5 (lower is better)
Translates to: APITRASIHLEFIFISTGSNKTE*LGSEFH
Trigger: ATGGAACTCTGAGCCCAACAACTCCGTTTTGTTGGA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTTCCCCAATCAGGGGTaGGGAGGAGGCAAGTATCTC +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLFPNQG*GGGKYL
Trigger: GAGATACTTGCCTCCTCCCAACCCCTGATTGGGGAA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS TCA 90 bp AGGTGTATCTGCCACTGCTCCCGCACACTCTCCTTCATCACACAGTaGAACACAAAAATGAAGAATCCTTGCAAAGTGTTAAAAATGGCA +
Preference number: 5 (lower is better)
Translates to: RCICHCSRTLSFITQ*NTKMKNPCKVLKMA
Trigger: TGCCATTTTTAACACTTTGCAAGGATTCTTCATTTTTGTGTTTCACTGTGTGATGAAGGAGAGTGTGCGGGAGCAGTGGCAGATACACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS GCA 90 bp GTAGCCCCAGCATATATCACAGGTGTGACATCCAATGTAGATGTTTaGATGGTCATAGTAGTCCTGGGGGTAACTGAAGACAATAAAGTA +
Preference number: 5 (lower is better)
Translates to: VAPAYITGVTSNVDV*MVIVVLGVTEDNKV
Trigger: TACTTTATTGTCTTCAGTTACCCCCAGGACTACTATGACCATGCAAACATCTACATTGGATGTCACACCTGTGATATATGCTGGGGCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS GCA 90 bp GTGCTCATAGTAGCAGAGGGTAGTGTTGTCAAGTTAGTGAATGGGTaGGCTGATATCATGTCAGATGTCAGAAATGTTGATTTTGACACC +
Preference number: 5 (lower is better)
Translates to: VLIVAEGSVVKLVNG*ADIMSDVRNVDFDT
Trigger: GGTGTCAAAATCAACATTTCTGACATCTGACATGATATCAGCGCACCCATTCACTAACTTGACAACACTACCCTCTGCTACTATGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 90 bp CAAATGAAGTATCCTGGCCATATGAGACAGAGTGAGTCACATAGGTaGAGTTTACTATCATTTCCACAGTCCTGGGAGTATATGCTGGAA +
Preference number: 5 (lower is better)
Translates to: QMKYPGHMRQSESHR*SLLSFPQSWEYMLE
Trigger: TTCCAGCATATACTCCCAGGACTGTGGAAATGATAGTAAACTCCACCTATGTGACTCACTCTGTCTCATATGGCCAGGATACTTCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 90 bp TATGAGGTGAATAAACAAATGATGTCAAAGAGGGTAGAGTTGCACTaGATGGGGTCCATGGAGGGTATGAAACAGGGGTATTCAAAGATG +
Preference number: 5 (lower is better)
Translates to: YEVNKQMMSKRVELH*MGSMEGMKQGYSKM
Trigger: CATCTTTGAATACCCCTGTTTCATACCCTCCATGGACCCCATCCAGTGCAACTCTACCCTCTTTGACATCATTTGTTTATTCACCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 90 bp GAACCTTCAGCTGTGGGTATGTTCCAGGAAGTCATAAGCAGAGGTTaGGTATTACTAGATGTCATTCTTGTTCCCAGAACTGGAAATTCA +
Preference number: 5 (lower is better)
Translates to: EPSAVGMFQEVISRG*VLLDVILVPRTGNS
Trigger: TGAATTTCCAGTTCTGGGAACAAGAATGACATCTAGTAATACCCAACCTCTGCTTATGACTTCCTGGAACATACCCACAGCTGAAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTAGGAAGAGTTCTAATTaGCCCTTCACACCATCCCAT +
Preference number: 5 (lower is better)
Translates to: APITRASIHLEFIFISTGRKSSN*PFTPSH
Trigger: ATGGGATGGTGTGAAGGGCAAATTAGAACTCTTCCT...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR CAA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAAGGAAGAGTTCTAATTaGCCCTTCACACCATCCCAT +
Preference number: 5 (lower is better)
Translates to: VHYLVVICEILVHPSPEQRKSSN*PFTPSH
Trigger: ATGGGATGGTGTGAAGGGCAAATTAGAACTCTTCCT...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR CAA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACTGTCAGGTTGTGTGGTaGATCCGTTACTTCCAGTAT +
Preference number: 5 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHCQVVW*IRYFQY
Trigger: ATACTGGAAGTAACGGATCAACCACACAACCTGACA...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTTGGCAGTGGTACCTTaGCCCTCTGGAGATGCTTTC +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLLAVVP*PSGDAF
Trigger: GAAAGCATCTCCAGAGGGCAAAGGTACCACTGCCAA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGAACAACAGTCTCCCTaGGTGTCAAAGGAAGTTCAT +
Preference number: 5 (lower is better)
Translates to: APITRASIHLEFIFISTGEQQSP*VSKEVH
Trigger: ATGAACTTCCTTTGACACCAAGGGAGACTGTTGTTC...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGAACAACAGTCTCCCTaGGTGTCAAAGGAAGTTCAT +
Preference number: 5 (lower is better)
Translates to: VHYLVVICEILVHPSPEQEQQSP*VSKEVH
Trigger: ATGAACTTCCTTTGACACCAAGGGAGACTGTTGTTC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGGAACAACAGTCTCCCTaGGTGTCAAAGGAAGTTCAT +
Preference number: 5 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHREQQSP*VSKEVH
Trigger: ATGAACTTCCTTTGACACCAAGGGAGACTGTTGTTC...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTTGGTACAGGGGTCGTaGTACCTCCAAATACAATTG +
Preference number: 5 (lower is better)
Translates to: APITRASIHLEFIFISTGLVQGS*YLQIQL
Trigger: CAATTGTATTTGGAGGTACAACGACCCCTGTACCAA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTGGTACAGGGGTCGTaGTACCTCCAAATACAATTG +
Preference number: 5 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRLVQGS*YLQIQL
Trigger: CAATTGTATTTGGAGGTACAACGACCCCTGTACCAA...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGCCTCTACTTGAGATATaGGTTGAGTTGCTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRPLLEI*VELLLV
Trigger: CACCAGAAGCAACTCAACCAATATCTCAAGTAGAGG...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGGTCATCTGGTCTTaGTCGGAAGATAAGACAGAG +
Preference number: 5 (lower is better)
Translates to: APITRASIHLEFIFISTGMVIWS*SEDKTE
Trigger: CTCTGTCTTATCTTCCGACAAAGACCAGATGACCAT...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGGTGACTGGAAATTTTaGTGGTCTCAGGAAATCCTG +
Preference number: 5 (lower is better)
Translates to: HYLVVICEILVHPSPEQVGDWKF*WSQEIL
Trigger: CAGGATTTCCTGAGACCACAAAAATTTCCAGTCACC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGGTGACTGGAAATTTTaGTGGTCTCAGGAAATCCTG +
Preference number: 5 (lower is better)
Translates to: VHYLVVICEILVHPSPEQGDWKF*WSQEIL
Trigger: CAGGATTTCCTGAGACCACAAAAATTTCCAGTCACC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTGGGGTTGGCAGTTATaGTGGTTCTGGAGGATGCCT +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLWGWQL*WFWRMP
Trigger: AGGCATCCTCCAGAACCACAATAACTGCCAACCCCA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGACACAGTCCTGGGGTaGGCAGTTATTGTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLDTVLG*AVIVVL
Trigger: CAGAACCACAATAACTGCCAACCCCAGGACTGTGTC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGAAGGAAACTGTGGACTaGGTGGCAGTAGGCGAAGTC +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLKETVD*VAVGEV
Trigger: GACTTCGCCTACTGCCACCAAGTCCACAGTTTCCTT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGGTCCCTGCTTTTAATTaGGGTTTCCAGAGTAGCAAG +
Preference number: 5 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRVPAFN*GFQSSK
Trigger: CTTGCTACTCTGGAAACCCAAATTAAAAGCAGGGAC...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCGGCCACCGTCAGATTaGCTATCTGCCCAGAAAACT +
Preference number: 5 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFRPPSD*LSAQKT
Trigger: AGTTTTCTGGGCAGATAGCAAATCTGACGGTGGCCG...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATCCTCCCACAGGGACATaGCCTAGGAAAATCTCAGGG +
Preference number: 5 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYPPTGT*PRKISG
Trigger: CCCTGAGATTTTCCTAGGCAATGTCCCTGTGGGAGG...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATCCAACAAAACGGAGTaGTTGGGCTCAGAGTTCCAT +
Preference number: 5 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPSNKTE*LGSEFH
Trigger: ATGGAACTCTGAGCCCAACAACTCCGTTTTGTTGGA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGCAGAGCCTAAAGATTaGAAAGTGGAGCTAGTTGCA +
Preference number: 5 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHAEPKD*KVELVA
Trigger: TGCAACTAGCTCCACTTTCAAATCTTTAGGCTCTGC...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGGCAGAGCCTAAAGATTaGAAAGTGGAGCTAGTTGCA +
Preference number: 5 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRAEPKD*KVELVA
Trigger: TGCAACTAGCTCCACTTTCAAATCTTTAGGCTCTGC...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 90 bp CAGGAGGGCGTTATTAGTAATATAAGAGAAGGCCATCCAATACCTTaGGTTGTCATCCATGAATACCAGATCAATGCATGCTGTGAATCG +
Preference number: 5 (lower is better)
Translates to: QEGVISNIREGHPIP*VVIHEYQINACCES
Trigger: CGATTCACAGCATGCATTGATCTGGTATTCATGGATGACAACTCAAGGTATTGGATGGCCTTCTCTTATATTACTAATAACGCCCTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS GCA 90 bp GTGGAGCTAGTTGCAGTTGACTTGAGAGATGGCGTCAACAGTTTGTaGTCAAAGATTTTCTTTAGTCCCTCCTGTTTATATCCAACCTTT +
Preference number: 5 (lower is better)
Translates to: VELVAVDLRDGVNSL*SKIFFSPSCLYPTF
Trigger: AAAGGTTGGATATAAACAGGAGGGACTAAAGAAAATCTTTGAGCACAAACTGTTGACGCCATCTCTCAAGTCAACTGCAACTAGCTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGTTGGGATGATCTTGTaGACAAGCCAGACGTCTTCT +
Preference number: 5 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYVGMIL*TSQTSS
Trigger: AGAAGACGTCTGGCTTGTCAACAAGATCATCCCAAC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGTTGGGATGATCTTGTaGACAAGCCAGACGTCTTCT +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFIVGMIL*TSQTSS
Trigger: AGAAGACGTCTGGCTTGTCAACAAGATCATCCCAAC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTACAGTTGGGATGATCTaGTTGACAAGCCAGACGTCT +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFITVGMI*LTSQTS
Trigger: AGACGTCTGGCTTGTCAACAAGATCATCCCAACTGT...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGTCCAAATGGTCTCATaGCTGGAGAACAGATGGGCA +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLVQMVS*LENRWA
Trigger: TGCCCATCTGTTCTCCAGCAATGAGACCATTTGGAC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATGCTGTAGTAGCATCATaGGCAGTGGTACCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYAVVAS*AVVPLP
Trigger: GGGCAAAGGTACCACTGCCAATGATGCTACTACAGC...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGTGTTGTTGCTGACTTaGGTACAGGGGTCGTTGTAC +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLVLLLT*VQGSLY
Trigger: GTACAACGACCCCTGTACCAAAGTCAGCAACAACAC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACTTAATCTTTGTGTTGTaGCTGACTTTGGTACAGGGG +
Preference number: 5 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHLIFVL*LTLVQG
Trigger: CCCCTGTACCAAAGTCAGCAACAACACAAAGATTAA...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATCACTTCCAGCATTGTaGAAAATGGAGAAACCTCAG +
Preference number: 5 (lower is better)
Translates to: HYLVVICEILVHPSPEQVSLPAL*KMEKPQ
Trigger: CTGAGGTTTCTCCATTTTCAACAATGCTGGAAGTGA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTGTCAGGGGGAGGTTTaGAGCAGACAAGAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYCQGEV*SRQECV
Trigger: CACACACTCTTGTCTGCTCAAAACCTCCCCCTGACA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACCTCTACTTGAGATATaGGTTGAGTTGCTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPPLLEI*VELLLV
Trigger: CACCAGAAGCAACTCAACCAATATCTCAAGTAGAGG...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAAGAAGTCTCCTCTACTaGAGATATTGGTTGAGTTGC +
Preference number: 5 (lower is better)
Translates to: VHYLVVICEILVHPSPEQRSLLY*RYWLSC
Trigger: GCAACTCAACCAATATCTCAAGTAGAGGAGACTTCT...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATTACAAAGGGCAAAGTaGGCTCTGTTGGAGAGAGAA +
Preference number: 5 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPLQRAK*ALLERE
Trigger: TTCTCTCTCCAACAGAGCCAACTTTGCCCTTTGTAA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTCAAAGAGGGTAGAGTaGCACTGGATGGGGTCCATG +
Preference number: 5 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYSKRVE*HWMGSM
Trigger: CATGGACCCCATCCAGTGCAACTCTACCCTCTTTGA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGGAAATTCAACCATTaGGGATGTGGGAGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFIWKFNH*GCGRRR
Trigger: TCTCCTCCTCCCACATCCCAAATGGTTGAATTTCCA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATCGGCCACCGTCAGATTaGCTATCTGCCCAGAAAACT +
Preference number: 5 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYRPPSD*LSAQKT
Trigger: AGTTTTCTGGGCAGATAGCAAATCTGACGGTGGCCG...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGAAAGGCACAGTGAACTaGACCATAATTCTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRKGTVN*TIILVS
Trigger: GGAAACCAGAATTATGGTCAAGTTCACTGTGCCTTT...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTAAAGGCACAGTGAACTaGACCATAATTCTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: APITRASIHLEFIFISTGKGTVN*TIILVS
Trigger: GGAAACCAGAATTATGGTCAAGTTCACTGTGCCTTT...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACCGAGTCTTCTGGATTaGGGATTTCACAGAATTCAG +
Preference number: 5 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPPSLLD*GFHRIQ
Trigger: CTGAATTCTGTGAAATCCCAAATCCAGAAGACTCGG...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTCTAGTTGCAGTTGACTaGAGAGATGGCGTCAACAGT +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFILVAVD*RDGVNS
Trigger: ACTGTTGACGCCATCTCTCAAGTCAACTGCAACTAG...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAGCAGAGCCTAAAGATTaGAAAGTGGAGCTAGTTGCA +
Preference number: 5 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPAEPKD*KVELVA
Trigger: TGCAACTAGCTCCACTTTCAAATCTTTAGGCTCTGC...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 90 bp ATCTCATTGGATGTAGGTACATTAATAGTGGTGGAAATTGGAAACTaGGAACCTTCAGCTGTGGGTATGTTCCAGGAAGTCATAAGCAGA +
Preference number: 5 (lower is better)
Translates to: ISLDVGTLIVVEIGN*EPSAVGMFQEVISR
Trigger: TCTGCTTATGACTTCCTGGAACATACCCACAGCTGAAGGTTCTCAGTTTCCAATTTCCACCACTATTAATGTACCTACATCCAATGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAATCCAATACCTTGAGTaGTCATCCATGAATACCAGA +
Preference number: 5 (lower is better)
Translates to: VHYLVVICEILVHPSPEQIQYLE*SSMNTR
Trigger: TCTGGTATTCATGGATGACAACTCAAGGTATTGGAT...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR CAA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACTTTTACTCCAGTAATTaGGGATGGAGTGGTCATATC +
Preference number: 5 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHFYSSN*GWSGHI
Trigger: GATATGACCACTCCATCCCAAATTACTGGAGTAAAA...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGGTGGAGATGTTGTATaGGAATATGATATGGTTGTG +
Preference number: 5 (lower is better)
Translates to: VHYLVVICEILVHPSPEQGGDVV*EYDMVV
Trigger: CACAACCATATCATATTCCAATACAACATCTCCACC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACCAGAGGTGGAGATGTaGTATTGGAATATGATATGG +
Preference number: 5 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPPEVEM*YWNMIW
Trigger: CCATATCATATTCCAATACAACATCTCCACCTCTGG...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAAGATGGCTGATGAAGTaGATAAAACATCCACTGCAA +
Preference number: 5 (lower is better)
Translates to: VHYLVVICEILVHPSPEQRWLMK*IKHPLQ
Trigger: TTGCAGTGGATGTTTTATCAACTTCATCAGCCATCT...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGATGGCTGATGAAGTaGATAAAACATCCACTGCAA +
Preference number: 5 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHRWLMK*IKHPLQ
Trigger: TTGCAGTGGATGTTTTATCAACTTCATCAGCCATCT...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAATGGCTTCAACCATTTTaGTTGTCTTTGTGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: VHYLVVICEILVHPSPEQWLQPF*LSLCFL
Trigger: CAGAAAGCACAAAGACAACAAAAATGGTTGAAGCCA...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAAGAAGGTGTAGGTGGTaGAAAGATTTCAGTAGCCAT +
Preference number: 5 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPRRCRW*KDFSSH
Trigger: ATGGCTACTGAAATCTTTCAACCACCTACACCTTCT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACTTCAGTGGGGTGATATaGGTAGTTGCGGATAAATAT +
Preference number: 5 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHFSGVI*VVADKY
Trigger: ATATTTATCCGCAACTACCAATATCACCCCACTGAA...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTATTCAGTGGGGTGATATaGGTAGTTGCGGATAAATAT +
Preference number: 5 (lower is better)
Translates to: HYLVVICEILVHPSPEQVFSGVI*VVADKY
Trigger: ATATTTATCCGCAACTACCAATATCACCCCACTGAA...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATTAATCTTTGTGTTGTaGCTGACTTTGGTACAGGGG +
Preference number: 5 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPLIFVL*LTLVQG
Trigger: CCCCTGTACCAAAGTCAGCAACAACACAAAGATTAA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAACTCTCACCTCAGTTGTaGCAGTTTTATTATCCAATG +
Preference number: 5 (lower is better)
Translates to: VHYLVVICEILVHPSPEQLSPQL*QFYYPM
Trigger: CATTGGATAATAAAACTGCAACAACTGAGGTGAGAG...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATCCTCTACTTGAGATATaGGTTGAGTTGCTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYPLLEI*VELLLV
Trigger: CACCAGAAGCAACTCAACCAATATCTCAAGTAGAGG...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGAAGTAGTCAACTTATaGGCAGAGATGTGTGAGGGT +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFIEVVNL*AEMCEG
Trigger: ACCCTCACACATCTCTGCCAATAAGTTGACTACTTC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTATGGTCATCTGGTCTTaGTCGGAAGATAAGACAGAG +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFIMVIWS*SEDKTE
Trigger: CTCTGTCTTATCTTCCGACAAAGACCAGATGACCAT...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATATGGTCATCTGGTCTTaGTCGGAAGATAAGACAGAG +
Preference number: 5 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYMVIWS*SEDKTE
Trigger: CTCTGTCTTATCTTCCGACAAAGACCAGATGACCAT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGGTGACTGGAAATTTTaGTGGTCTCAGGAAATCCTG +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFIGDWKF*WSQEIL
Trigger: CAGGATTTCCTGAGACCACAAAAATTTCCAGTCACC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACTTGTTGAGCTGGAAGTaGTGGTATCTACAAATGAAG +
Preference number: 5 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHLLSWK*WYLQMK
Trigger: CTTCATTTGTAGATACCACAACTTCCAGCTCAACAA...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAAGAATAACCCAACTCTaGTGGAAGTGTCAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPRITQL*WKCQKR
Trigger: TCTCTTCTGACACTTCCACAAGAGTTGGGTTATTCT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTACAAAGGGCAAAGTaGGCTCTGTTGGAGAGAGAA +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFILQRAK*ALLERE
Trigger: TTCTCTCTCCAACAGAGCCAACTTTGCCCTTTGTAA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGTGATGACTGTTGAGTaGCTGATAGAAATGGTGAAA +
Preference number: 5 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHVMTVE*LIEMVK
Trigger: TTTCACCATTTCTATCAGCAACTCAACAGTCATCAC...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTGATGACTGTTGAGTaGCTGATAGAAATGGTGAAA +
Preference number: 5 (lower is better)
Translates to: VHYLVVICEILVHPSPEQVMTVE*LIEMVK
Trigger: TTTCACCATTTCTATCAGCAACTCAACAGTCATCAC...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTGGAAATTCAACCATTaGGGATGTGGGAGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLWKFNH*GCGRRR
Trigger: TCTCCTCCTCCCACATCCCAAATGGTTGAATTTCCA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTAGTCATAAGCAGAGGTaGGGTATTACTAGATGTCAT +
Preference number: 5 (lower is better)
Translates to: APITRASIHLEFIFISTGSHKQR*GITRCH
Trigger: ATGACATCTAGTAATACCCAACCTCTGCTTATGACT...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGAGTCATAAGCAGAGGTaGGGTATTACTAGATGTCAT +
Preference number: 5 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRSHKQR*GITRCH
Trigger: ATGACATCTAGTAATACCCAACCTCTGCTTATGACT...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACTCAGAATGGGTGACTTaGAAATTACAGATCCTGAAG +
Preference number: 5 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHSEWVT*KLQILK
Trigger: CTTCAGGATCTGTAATTTCAAAGTCACCCATTCTGA...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAATCAGAATGGGTGACTTaGAAATTACAGATCCTGAAG +
Preference number: 5 (lower is better)
Translates to: VHYLVVICEILVHPSPEQSEWVT*KLQILK
Trigger: CTTCAGGATCTGTAATTTCAAAGTCACCCATTCTGA...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGTCCCTGCTTTTAATTaGGGTTTCCAGAGTAGCAAG +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFIVPAFN*GFQSSK
Trigger: CTTGCTACTCTGGAAACCCAAATTAAAAGCAGGGAC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGCTGTTTCATCAGCTTaGCAATTTCCAGGCTCTAGT +
Preference number: 5 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYAVSSA*QFPGSS
Trigger: ACTAGAGCCTGGAAATTGCAAAGCTGATGAAACAGC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTTTTATGCATCTGGTTaGGGCTGTCTCCGTAGGGTT +
Preference number: 5 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFFYASG*GCLRRV
Trigger: AACCCTACGGAGACAGCCCAAACCAGATGCATAAAA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGAAGATCGTTTGTAAGTaGCTAAGAGGAATTCTCTCC +
Preference number: 5 (lower is better)
Translates to: CTHHPSKYTLGIHFYFHRKIVCK*LRGILS
Trigger: GGAGAGAATTCCTCTTAGCAACTTACAAACGATCTT...CCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATAACAAAACGGAGTTGTaGGGCTCAGAGTTCCATACA +
Preference number: 5 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYNKTEL*GSEFHT
Trigger: TGTATGGAACTCTGAGCCCAACAACTCCGTTTTGTT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTAACAAAACGGAGTTGTaGGGCTCAGAGTTCCATACA +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFINKTEL*GSEFHT
Trigger: TGTATGGAACTCTGAGCCCAACAACTCCGTTTTGTT...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTCCAACAAAACGGAGTaGTTGGGCTCAGAGTTCCAT +
Preference number: 5 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFSNKTE*LGSEFH
Trigger: ATGGAACTCTGAGCCCAACAACTCCGTTTTGTTGGA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATCCGAGTCTTCTGGATTaGGGATTTCACAGAATTCAG +
Preference number: 5 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYPSLLD*GFHRIQ
Trigger: CTGAATTCTGTGAAATCCCAAATCCAGAAGACTCGG...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTCCGAGTCTTCTGGATTaGGGATTTCACAGAATTCAG +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFIPSLLD*GFHRIQ
Trigger: CTGAATTCTGTGAAATCCCAAATCCAGAAGACTCGG...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATAGGCTCATTGTGCCTTaGAGGTCATGCAGGATCATC +
Preference number: 5 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYRLIVP*RSCRII
Trigger: GATGATCCTGCATGACCTCAAAGGCACAATGAGCCT...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTGATGGCGTCAACAGTTaGTGCTCAAAGATTTTCTTT +
Preference number: 5 (lower is better)
Translates to: APITRASIHLEFIFISTGDGVNS*CSKIFF
Trigger: AAAGAAAATCTTTGAGCACAAACTGTTGACGCCATC...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCTAGTTGCAGTTGACTaGAGAGATGGCGTCAACAGT +
Preference number: 5 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFLVAVD*RDGVNS
Trigger: ACTGTTGACGCCATCTCTCAAGTCAACTGCAACTAG...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 90 bp TATGGATGTGGTTCCAGAAACTATGGAGAAATTAGCAAACCATGGTaGTGTCAATTTGGATACAGCTGTTGTATATCTGGCTGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: YGCGSRNYGEISKPW*CQFGYSCCISGCSS
Trigger: GCTACTACAGCCAGATATACAACAGCTGTATCCAAATTGACATCACCATGGTTTGCTAATTTCTCCATAGTTTCTGGAACCACATCCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACGATACAACTGAATTCTaGGTAAATCTGGATGTGGAT +
Preference number: 5 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHDTTEF*VNLDVD
Trigger: ATCCACATCCAGATTTACCAAGAATTCAGTTGTATC...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTAGATACAACTGAATTCTaGGTAAATCTGGATGTGGAT +
Preference number: 5 (lower is better)
Translates to: HYLVVICEILVHPSPEQVDTTEF*VNLDVD
Trigger: ATCCACATCCAGATTTACCAAGAATTCAGTTGTATC...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCATTCAGTGGGGTGATATaGGTAGTTGCGGATAAATAT +
Preference number: 5 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPFSGVI*VVADKY
Trigger: ATATTTATCCGCAACTACCAATATCACCCCACTGAA...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTCATGGTGATGTCAATTaGGATACAGCTGTTGTATAT +
Preference number: 5 (lower is better)
Translates to: APITRASIHLEFIFISTGHGDVN*DTAVVY
Trigger: ATATACAACAGCTGTATCCAAATTGACATCACCATG...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTTAAATTCAGGCATATaGGTTATGGATGTGGTTCCA +
Preference number: 5 (lower is better)
Translates to: APITRASIHLEFIFISTGLNSGI*VMDVVP
Trigger: TGGAACCACATCCATAACCAATATGCCTGAATTTAA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTTGGTACAGGGGTCGTaGTACCTCCAAATACAATTG +
Preference number: 5 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFLVQGS*YLQIQL
Trigger: CAATTGTATTTGGAGGTACAACGACCCCTGTACCAA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAACATTTAATCTTTGTGTaGTTGCTGACTTTGGTACAG +
Preference number: 5 (lower is better)
Translates to: VHYLVVICEILVHPSPEQHLIFV*LLTLVQ
Trigger: CTGTACCAAAGTCAGCAACAACACAAAGATTAAATG...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAAGTACATTTAATCTTTGTGTaGTTGCTGACTTTGGTACAG +
Preference number: 5 (lower is better)
Translates to: HYLVVICEILVHPSPEQVHLIFV*LLTLVQ
Trigger: CTGTACCAAAGTCAGCAACAACACAAAGATTAAATG...TACTTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTAAGTTGCTTCTTTTCTaGTCACAGTGGCATTTAATC +
Preference number: 5 (lower is better)
Translates to: APITRASIHLEFIFISTGKLLLF*SQWHLI
Trigger: GATTAAATGCCACTGTGACAAGAAAAGAAGCAACTT...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCACTTCCAGCATTGTaGAAAATGGAGAAACCTCAG +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFISLPAL*KMEKPQ
Trigger: CTGAGGTTTCTCCATTTTCAACAATGCTGGAAGTGA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GTACATTATTTAGTGGTGATTTGTGAGATTTTGGTGCACCCATCACCCGAGCAATTTCTCTCACCTCAGTaGTTGCAGTTTTATTATCCA +
Preference number: 5 (lower is better)
Translates to: VHYLVVICEILVHPSPEQFLSPQ*LQFYYP
Trigger: TGGATAATAAAACTGCAACAACTGAGGTGAGAGAAA...TTGCTCGGGTGATGGGTGCACCAAAATCTCACAAATCACCACTAAATAATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTTTTCTCTCACCTCAGTaGTTGCAGTTTTATTATCCA +
Preference number: 5 (lower is better)
Translates to: APITRASIHLEFIFISTGFLSPQ*LQFYYP
Trigger: TGGATAATAAAACTGCAACAACTGAGGTGAGAGAAA...ACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATAGAAGTCTCCTCTACTaGAGATATTGGTTGAGTTGC +
Preference number: 5 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYRSLLY*RYWLSC
Trigger: GCAACTCAACCAATATCTCAAGTAGAGGAGACTTCT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGAAGTAGTCAACTTATaGGCAGAGATGTGTGAGGGT +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLEVVNL*AEMCEG
Trigger: ACCCTCACACATCTCTGCCAATAAGTTGACTACTTC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGTGTCAGAAACTTTTTaGGAGGTGAAGGCAGTTACA +
Preference number: 5 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYVSETF*EVKAVT
Trigger: TGTAACTGCCTTCACCTCCAAAAAAGTTTCTGACAC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGTGTCAGAAACTTTTTaGGAGGTGAAGGCAGTTACA +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFIVSETF*EVKAVT
Trigger: TGTAACTGCCTTCACCTCCAAAAAAGTTTCTGACAC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTAGAATAACCCAACTCTaGTGGAAGTGTCAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFIRITQL*WKCQKR
Trigger: TCTCTTCTGACACTTCCACAAGAGTTGGGTTATTCT...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAATCCAATGTAGATGTTaGCATGGTCATAGTAGTCCT +
Preference number: 5 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPIQCRC*HGHSSP
Trigger: AGGACTACTATGACCATGCAAACATCTACATTGGAT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGTCCCTGCTTTTAATTaGGGTTTCCAGAGTAGCAAG +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLVPAFN*GFQSSK
Trigger: CTTGCTACTCTGGAAACCCAAATTAAAAGCAGGGAC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGCTGTTTCATCAGCTTaGCAATTTCCAGGCTCTAGT +
Preference number: 5 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFAVSSA*QFPGSS
Trigger: ACTAGAGCCTGGAAATTGCAAAGCTGATGAAACAGC...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATAAAGGCACAGTGAACTaGACCATAATTCTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYKGTVN*TIILVS
Trigger: GGAAACCAGAATTATGGTCAAGTTCACTGTGCCTTT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATAGTGCTGTGCACAGGTaGATCAGAATTTTGGCAGGA +
Preference number: 5 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYSAVHR*IRILAG
Trigger: TCCTGCCAAAATTCTGATCAACCTGTGCACAGCACT...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACTTTGGAATGTATATGTaGAAGACTTTGACTAGAGCC +
Preference number: 5 (lower is better)
Translates to: WCTHHPSKYTLGIHFYFHFGMYM*KTLTRA
Trigger: GGCTCTAGTCAAAGTCTTCAACATATACATTCCAAA...GTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAGATGGCGTCAACAGTTaGTGCTCAAAGATTTTCTTT +
Preference number: 5 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPDGVNS*CSKIFF
Trigger: AAAGAAAATCTTTGAGCACAAACTGTTGACGCCATC...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATCTAGTTGCAGTTGACTaGAGAGATGGCGTCAACAGT +
Preference number: 5 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYLVAVD*RDGVNS
Trigger: ACTGTTGACGCCATCTCTCAAGTCAACTGCAACTAG...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 90 bp CTGATATATGATGTGTTCTTTCATTGTCTAAGTCTCATATTGCTGTaGAGATTACATAACACACAGTATGTAAAGTGCTTGGCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: LIYDVFFHCLSLILL*RLHNTQYVKCLAQR
Trigger: GCGCTGGGCCAAGCACTTTACATACTGTGTGTTATGTAATCTTCACAGCAATATGAGACTTAGACAATGAAAGAACACATCATATATCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS CCA 90 bp ATAGCTCTTAAAGATGTTGATAATGAAGGGTTCTCAGAAAGCCCATaGTTAGGAAGAATTCCTGACATAGGAATTGATGACATTGCCATG +
Preference number: 5 (lower is better)
Translates to: IALKDVDNEGFSESP*LGRIPDIGIDDIAM
Trigger: CATGGCAATGTCATCAATTCCTATGTCAGGAATTCTTCCTAACCATGGGCTTTCTGAGAACCCTTCATTATCAACATCTTTAAGAGCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAGGAATGTGCAGTATTTaGTGGTTTTACTCCAGTAAT +
Preference number: 5 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPGMCSI*WFYSSN
Trigger: ATTACTGGAGTAAAACCACAAAATACTGCACATTCC...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAGAGGTGGAGATGTaGTATTGGAATATGATATGG +
Preference number: 5 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFPEVEM*YWNMIW
Trigger: CCATATCATATTCCAATACAACATCTCCACCTCTGG...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCAATGGAATTGGTAGTATaGTCTATGGATATACTCTGG +
Preference number: 5 (lower is better)
Translates to: LVHPSPEQVYTWNSFLFPMELVV*SMDILW
Trigger: CCAGAGTATATCCATAGACAATACTACCAATTCCAT...TGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTAGAAGGTGTAGGTGGTaGAAAGATTTCAGTAGCCAT +
Preference number: 5 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFRRCRW*KDFSSH
Trigger: ATGGCTACTGAAATCTTTCAACCACCTACACCTTCT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTTAATCTTTGTGTTGTaGCTGACTTTGGTACAGGGG +
Preference number: 5 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFLIFVL*LTLVQG
Trigger: CCCCTGTACCAAAGTCAGCAACAACACAAAGATTAA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTAGAAGTCTCCTCTACTaGAGATATTGGTTGAGTTGC +
Preference number: 5 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFRSLLY*RYWLSC
Trigger: GCAACTCAACCAATATCTCAAGTAGAGGAGACTTCT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTGTTGAGCTGGAAGTaGTGGTATCTACAAATGAAG +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFILLSWK*WYLQMK
Trigger: CTTCATTTGTAGATACCACAACTTCCAGCTCAACAA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTTGTTGAGCTGGAAGTaGTGGTATCTACAAATGAAG +
Preference number: 5 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYLLSWK*WYLQMK
Trigger: CTTCATTTGTAGATACCACAACTTCCAGCTCAACAA...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGAGAATAACCCAACTCTaGTGGAAGTGTCAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLRITQL*WKCQKR
Trigger: TCTCTTCTGACACTTCCACAAGAGTTGGGTTATTCT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATGTGATGACTGTTGAGTaGCTGATAGAAATGGTGAAA +
Preference number: 5 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYVMTVE*LIEMVK
Trigger: TTTCACCATTTCTATCAGCAACTCAACAGTCATCAC...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTAATTGTAGCCATTTCTaGTCCTTCTCTCTGTTCCAA +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFINCSHF*SFSLFQ
Trigger: TTGGAACAGAGAGAAGGACAAGAAATGGCTACAATT...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATAATTGTAGCCATTTCTaGTCCTTCTCTCTGTTCCAA +
Preference number: 5 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYNCSHF*SFSLFQ
Trigger: TTGGAACAGAGAGAAGGACAAGAAATGGCTACAATT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATAACAAAACGGAGTTGTaGGGCTCAGAGTTCCATACA +
Preference number: 5 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYNKTEL*GSEFHT
Trigger: TGTATGGAACTCTGAGCCCAACAACTCCGTTTTGTT...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGATGGCGTCAACAGTTaGTGCTCAAAGATTTTCTTT +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFIDGVNS*CSKIFF
Trigger: AAAGAAAATCTTTGAGCACAAACTGTTGACGCCATC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 90 bp AGTGTAGAGGAATGTGCAGTATTTTGTGGTTTTACTCCAGTAATTTaGGATGGAGTGGTCATATCTATCTGTTGTGAAACAGTTGTACTT +
Preference number: 5 (lower is better)
Translates to: SVEECAVFCGFTPVI*DGVVISICCETVVL
Trigger: AAGTACAACTGTTTCACAACAGATAGATATGACCACTCCATCCCAAATTACTGGAGTAAAACCACAAAATACTGCACATTCCTCTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGATCCAATACCTTGAGTaGTCATCCATGAATACCAGA +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLIQYLE*SSMNTR
Trigger: TCTGGTATTCATGGATGACAACTCAAGGTATTGGAT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS-3UTR CAA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTTTTACTCCAGTAATTaGGGATGGAGTGGTCATATC +
Preference number: 5 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFFYSSN*GWSGHI
Trigger: GATATGACCACTCCATCCCAAATTACTGGAGTAAAA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTGGAATGTGCAGTATTTaGTGGTTTTACTCCAGTAAT +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFIGMCSI*WFYSSN
Trigger: ATTACTGGAGTAAAACCACAAAATACTGCACATTCC...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGGTGGAGATGTTGTATaGGAATATGATATGGTTGTG +
Preference number: 5 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFGGDVV*EYDMVV
Trigger: CACAACCATATCATATTCCAATACAACATCTCCACC...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGGTGGAGATGTTGTATaGGAATATGATATGGTTGTG +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLGGDVV*EYDMVV
Trigger: CACAACCATATCATATTCCAATACAACATCTCCACC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATCCAGAGGTGGAGATGTaGTATTGGAATATGATATGG +
Preference number: 5 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYPEVEM*YWNMIW
Trigger: CCATATCATATTCCAATACAACATCTCCACCTCTGG...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGAGATGGCTGATGAAGTaGATAAAACATCCACTGCAA +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLRWLMK*IKHPLQ
Trigger: TTGCAGTGGATGTTTTATCAACTTCATCAGCCATCT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTGGCTTCAACCATTTTaGTTGTCTTTGTGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLWLQPF*LSLCFL
Trigger: CAGAAAGCACAAAGACAACAAAAATGGTTGAAGCCA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTTTTCATATCAGTTGTaGCCAATGGAAATGCTGTCT +
Preference number: 5 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYFSYQL*PMEMLS
Trigger: AGACAGCATTTCCATTGGCAACAACTGATATGAAAA...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTTAAATTCAGGCATATaGGTTATGGATGTGGTTCCA +
Preference number: 5 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYLNSGI*VMDVVP
Trigger: TGGAACCACATCCATAACCAATATGCCTGAATTTAA...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTAAGTTGCTTCTTTTCTaGTCACAGTGGCATTTAATC +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFIKLLLF*SQWHLI
Trigger: GATTAAATGCCACTGTGACAAGAAAAGAAGCAACTT...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATAAGTTGCTTCTTTTCTaGTCACAGTGGCATTTAATC +
Preference number: 5 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYKLLLF*SQWHLI
Trigger: GATTAAATGCCACTGTGACAAGAAAAGAAGCAACTT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTCACTTCCAGCATTGTaGAAAATGGAGAAACCTCAG +
Preference number: 5 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYSLPAL*KMEKPQ
Trigger: CTGAGGTTTCTCCATTTTCAACAATGCTGGAAGTGA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGCTCTCACCTCAGTTGTaGCAGTTTTATTATCCAATG +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLLSPQL*QFYYPM
Trigger: CATTGGATAATAAAACTGCAACAACTGAGGTGAGAG...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTTCTCTCACCTCAGTaGTTGCAGTTTTATTATCCA +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFIFLSPQ*LQFYYP
Trigger: TGGATAATAAAACTGCAACAACTGAGGTGAGAGAAA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATATTTCTGTCATTTCATaGTATGAACTCCTAGGTGTG +
Preference number: 5 (lower is better)
Translates to: THHPSKYTLGIHFYFHRYISVIS*YELLGV
Trigger: CACACCTAGGAGTTCATACAATGAAATGACAGAAAT...ATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGAGTCATAAGCAGAGGTaGGGTATTACTAGATGTCAT +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLSHKQR*GITRCH
Trigger: ATGACATCTAGTAATACCCAACCTCTGCTTATGACT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGTCAGAATGGGTGACTTaGAAATTACAGATCCTGAAG +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLSEWVT*KLQILK
Trigger: CTTCAGGATCTGTAATTTCAAAGTCACCCATTCTGA...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTAAGATCGTTTGTAAGTaGCTAAGAGGAATTCTCTCC +
Preference number: 5 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFKIVCK*LRGILS
Trigger: GGAGAGAATTCCTCTTAGCAACTTACAAACGATCTT...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGAAGATCGTTTGTAAGTaGCTAAGAGGAATTCTCTCC +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLKIVCK*LRGILS
Trigger: GGAGAGAATTCCTCTTAGCAACTTACAAACGATCTT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp GATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTTGGAATGTATATGTaGAAGACTTTGACTAGAGCC +
Preference number: 5 (lower is better)
Translates to: DFGAPITRASIHLEFIFIFGMYM*KTLTRA
Trigger: GGCTCTAGTCAAAGTCTTCAACATATACATTCCAAA...AATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 90 bp TTGTGCAGTCATTGTTTCCAGAGGTGGAGATGTTGTATTGGAATATaGTATGGTTGTGTAATCAGTTGCAAATATAGGTATGCTTTGAGA +
Preference number: 5 (lower is better)
Translates to: LCSHCFQRWRCCIGI*YGCVISCKYRYALR
Trigger: TCTCAAAGCATACCTATATTTGCAACTGATTACACAACCATATCATATTCCAATACAACATCTCCACCTCTGGAAACAATGACTGCACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTTTTACTCCAGTAATTaGGGATGGAGTGGTCATATC +
Preference number: 5 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYFYSSN*GWSGHI
Trigger: GATATGACCACTCCATCCCAAATTACTGGAGTAAAA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGGGAATGTGCAGTATTTaGTGGTTTTACTCCAGTAAT +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLGMCSI*WFYSSN
Trigger: ATTACTGGAGTAAAACCACAAAATACTGCACATTCC...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGATGGAATTGGTAGTATaGTCTATGGATATACTCTGG +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLMELVV*SMDILW
Trigger: CCAGAGTATATCCATAGACAATACTACCAATTCCAT...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTGATACAACTGAATTCTaGGTAAATCTGGATGTGGAT +
Preference number: 5 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFDTTEF*VNLDVD
Trigger: ATCCACATCCAGATTTACCAAGAATTCAGTTGTATC...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGCATGGTGATGTCAATTaGGATACAGCTGTTGTATAT +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLHGDVN*DTAVVY
Trigger: ATATACAACAGCTGTATCCAAATTGACATCACCATG...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCATGGTGATGTCAATTaGGATACAGCTGTTGTATAT +
Preference number: 5 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFHGDVN*DTAVVY
Trigger: ATATACAACAGCTGTATCCAAATTGACATCACCATG...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp ATTTTGGTGCACCCATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTTTAAATTCAGGCATATaGGTTATGGATGTGGTTCCA +
Preference number: 5 (lower is better)
Translates to: ILVHPSPEQVYTWNSFLFLNSGI*VMDVVP
Trigger: TGGAACCACATCCATAACCAATATGCCTGAATTTAA...AAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATGGGTGCACCAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp TTGGTGGAACAGGTAGCATTTGGTTACATGAGTACATTATTTAGTGGTGATTTGCATTTAATCTTTGTGTaGTTGCTGACTTTGGTACAG +
Preference number: 5 (lower is better)
Translates to: LVEQVAFGYMSTLFSGDLHLIFV*LLTLVQ
Trigger: CTGTACCAAAGTCAGCAACAACACAAAGATTAAATG...CAAATCACCACTAAATAATGTACTCATGTAACCAAATGCTACCTGTTCCACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATCTCTCACCTCAGTTGTaGCAGTTTTATTATCCAATG +
Preference number: 5 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYLSPQL*QFYYPM
Trigger: CATTGGATAATAAAACTGCAACAACTGAGGTGAGAG...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATATCCAATGTAGATGTTaGCATGGTCATAGTAGTCCT +
Preference number: 5 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYIQCRC*HGHSSP
Trigger: AGGACTACTATGACCATGCAAACATCTACATTGGAT...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATATGGAATTGGTAGTATaGTCTATGGATATACTCTGG +
Preference number: 5 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYMELVV*SMDILW
Trigger: CCAGAGTATATCCATAGACAATACTACCAATTCCAT...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTTTTCATATCAGTTGTaGCCAATGGAAATGCTGTCT +
Preference number: 5 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYFSYQL*PMEMLS
Trigger: AGACAGCATTTCCATTGGCAACAACTGATATGAAAA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATATTTCTGTCATTTCATaGTATGAACTCCTAGGTGTG +
Preference number: 5 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYISVIS*YELLGV
Trigger: CACACCTAGGAGTTCATACAATGAAATGACAGAAAT...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS-3UTR CAA 90 bp CATCACCCGAGCAAGTATACACTTGGAATTCATTTTTATTTCCACAGGTATTATTTTGGAATGTATATGTaGAAGACTTTGACTAGAGCC +
Preference number: 5 (lower is better)
Translates to: HHPSKYTLGIHFYFHRYYFGMYM*KTLTRA
Trigger: GGCTCTAGTCAAAGTCTTCAACATATACATTCCAAA...ATAATACCTGTGGAAATAAAAATGAATTCCAAGTGTATACTTGCTCGGGTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp GGCACAAGGCTTAGGTTTTGTGACCTGTCCCCAACGTaGGGTCACACAGCCTGGGAGGGCTTCAACGGGTAT +
Preference number: 6 (lower is better)
Translates to: GTRLRFCDLSPT*GHTAWEGFNGY
Trigger: ATACCCGTTGAAGCCCTCCCAGGCTGTGTGACCCCACGTTGGGGACAGGTCACAAAACCTAAGCCTTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394143.6
CDS GCA 72 bp CTTGGCCCAGCGCCTAGCACCAGGTTCCAGCACCACTaGTTCTGTCAAGGACTCCACTGCTTCTTCTTTCCA +
Preference number: 6 (lower is better)
Translates to: LGPAPSTRFQHH*FCQGLHCFFFP
Trigger: TGGAAAGAAGAAGCAGTGGAGTCCTTGACAGAAGCAGTGGTGCTGGAACCTGGTGCTAGGCGCTGGGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS CAA 90 bp GATGCCAGCAGGGCCTGGTCTGGCCTAGAAGTCCAAATGGTCTCATaGCTGGAGAACAGATGGGCAGCTTCATCAGTTGTGGATGTGGGA +
Preference number: 6 (lower is better)
Translates to: DASRAWSGLEVQMVS*LENRWAASSVVDVG
Trigger: TCCCACATCCACAACTGATGAAGCTGCCCATCTGTTCTCCAGCAATGAGACCATTTGGACTTCTAGGCCAGACCAGGCCCTGCTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp TGGAGAACAGATGGGCAGCTTCATCAGTTGTGGATGTaGGACCTGACTCAGGTGCCTTGGATGTGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: WRTDGQLHQLWM*DLTQVPWMWKL
Trigger: CAGCTTCCACATCCAAGGCACCTGAGTCAGGTCCCACATCCACAACTGATGAAGCTGCCCATCTGTTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp GGTGGTTGTGTTCATAGATGCCAGCAGGGCCTGGTCTaGCCTAGAAGTCCAAATGGTCTCATTGCTGGAGAA +
Preference number: 6 (lower is better)
Translates to: GGCVHRCQQGLV*PRSPNGLIAGE
Trigger: TTCTCCAGCAATGAGACCATTTGGACTTCTAGGCCAGACCAGGCCCTGCTGGCATCTATGAACACAACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 72 bp AGGGCCTGGTCTGGCCTAGAAGTCCAAATGGTCTCATaGCTGGAGAACAGATGGGCAGCTTCATCAGTTGTG +
Preference number: 6 (lower is better)
Translates to: RAWSGLEVQMVS*LENRWAASSVV
Trigger: CACAACTGATGAAGCTGCCCATCTGTTCTCCAGCAATGAGACCATTTGGACTTCTAGGCCAGACCAGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp TCCAAATGGTCTCATTGCTGGAGAACAGATGGGCAGCTTCATCAGTaGTGGATGTGGGACCTGACTCAGGTGCCTTGGATGTGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: SKWSHCWRTDGQLHQ*WMWDLTQVPWMWKL
Trigger: CAGCTTCCACATCCAAGGCACCTGAGTCAGGTCCCACATCCACAACTGATGAAGCTGCCCATCTGTTCTCCAGCAATGAGACCATTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp AACCCCCAGGTGAGGCCAAGTAAGAATGTCAGGCTCATTGTGCCTTaGAGGTCATGCAGGATCATCTTCCGCCGAGTCTTCTGGATTTGG +
Preference number: 6 (lower is better)
Translates to: NPQVRPSKNVRLIVP*RSCRIIFRRVFWIW
Trigger: CCAAATCCAGAAGACTCGGCGGAAGATGATCCTGCATGACCTCAAAGGCACAATGAGCCTGACATTCTTACTTGGCCTCACCTGGGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 72 bp TGTCCTGTCTGTAGGGGTAGTGGAGAAACTGGTTTCTaGTATCCTTGTGGTAGAAGCACCCAGGGGTTCACC +
Preference number: 6 (lower is better)
Translates to: CPVCRGSGETGF*YPCGRSTQGFT
Trigger: GGTGAACCCCTGGGTGCTTCTACCACAAGGATATCAGAAACCAGTTTCTCCACTACCCCTACAGACAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 72 bp CATGGATGTCTTCCTGACAGAGATTACCGTGGCCTCTaGAGTGGTACGAATCAAGTCTCCATGGGTAGGCAC +
Preference number: 6 (lower is better)
Translates to: HGCLPDRDYRGL*SGTNQVSMGRH
Trigger: GTGCCTACCCATGGAGACTTGATTCGTACCACTTCAGAGGCCACGGTAATCTCTGTCAGGAAGACATCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp CCAGGGGTTCACCGAATATATGTGTGCTCCCAGAAGTaGGAGATCCAGCTGAAATTCCCTCAGATGTCTCTG +
Preference number: 6 (lower is better)
Translates to: PGVHRIYVCSQK*EIQLKFPQMSL
Trigger: CAGAGACATCTGAGGGAATTTCAGCTGGATCTCCCACTTCTGGGAGCACACATATATTCGGTGAACCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp AGAACTGAGTGGAGAGAAGGCAGTGGTGCCTACAAATaGAGTCACTATCCCAGCCATAATGGTGGTGGGAAC +
Preference number: 6 (lower is better)
Translates to: RTEWREGSGAYK*SHYPSHNGGGN
Trigger: GTTCCCACCACCATTATGGCTGGGATAGTGACTCCATTTGTAGGCACCACTGCCTTCTCTCCACTCAGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp GAGACACAGTCCTGGGGTTGGCAGTTATTGTGGTTCTaGAGGATGCCTCAGGGTGTGTGGAAATGTACACAA +
Preference number: 6 (lower is better)
Translates to: ETQSWGWQLLWF*RMPQGVWKCTQ
Trigger: TTGTGTACATTTCCACACACCCTGAGGCATCCTCCAGAACCACAATAACTGCCAACCCCAGGACTGTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp AAGGATGAGACACAGTCCTGGGGTTGGCAGTTATTGTaGTTCTGGAGGATGCCTCAGGGTGTGTGGAAATGT +
Preference number: 6 (lower is better)
Translates to: KDETQSWGWQLL*FWRMPQGVWKC
Trigger: ACATTTCCACACACCCTGAGGCATCCTCCAGAACCACAATAACTGCCAACCCCAGGACTGTGTCTCATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp AGCCTGGGAGGGCTTCAACGGGTATCTTCCATTCCCTaGAAGGTTATGAGGAGAATGTTGACCATCTGCTCT +
Preference number: 6 (lower is better)
Translates to: SLGGLQRVSSIP*KVMRRMLTICS
Trigger: AGAGCAGATGGTCAACATTCTCCTCATAACCTTCCAGGGAATGGAAGATACCCGTTGAAGCCCTCCCAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394143.6
CDS CAA 72 bp ATGAAGGATGAGACACAGTCCTGGGGTTGGCAGTTATaGTGGTTCTGGAGGATGCCTCAGGGTGTGTGGAAA +
Preference number: 6 (lower is better)
Translates to: MKDETQSWGWQL*WFWRMPQGVWK
Trigger: TTTCCACACACCCTGAGGCATCCTCCAGAACCACAATAACTGCCAACCCCAGGACTGTGTCTCATCCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 72 bp GTGAGGCCAAGTAAGAATGTCAGGCTCATTGTGCCTTaGAGGTCATGCAGGATCATCTTCCGCCGAGTCTTC +
Preference number: 6 (lower is better)
Translates to: VRPSKNVRLIVP*RSCRIIFRRVF
Trigger: GAAGACTCGGCGGAAGATGATCCTGCATGACCTCAAAGGCACAATGAGCCTGACATTCTTACTTGGCCTCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp TGGGCAGCTTCATCAGTTGTGGATGTGGGACCTGACTCAGGTGCCTaGGATGTGGAAGCTGATCTAGTGGACATCAAAGTAAGCAAGTGT +
Preference number: 6 (lower is better)
Translates to: WAASSVVDVGPDSGA*DVEADLVDIKVSKC
Trigger: ACACTTGCTTACTTTGATGTCCACTAGATCAGCTTCCACATCCAAGGCACCTGAGTCAGGTCCCACATCCACAACTGATGAAGCTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS GCA 72 bp AGTCCTGGGGTTGGCAGTTATTGTGGTTCTGGAGGATaGCTCAGGGTGTGTGGAAATGTACACAATGTCATC +
Preference number: 6 (lower is better)
Translates to: SPGVGSYCGSGG*LRVCGNVHNVI
Trigger: GATGACATTGTGTACATTTCCACACACCCTGAGGCATCCTCCAGAACCACAATAACTGCCAACCCCAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp CTAGAAGTCCAAATGGTCTCATTGCTGGAGAACAGATaGGCAGCTTCATCAGTTGTGGATGTGGGACCTGAC +
Preference number: 6 (lower is better)
Translates to: LEVQMVSLLENR*AASSVVDVGPD
Trigger: GTCAGGTCCCACATCCACAACTGATGAAGCTGCCCATCTGTTCTCCAGCAATGAGACCATTTGGACTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp GGGAACGGTTTTTACAAAGGGCAAAGTTGGCTCTGTTaGAGAGAGAAAGGTCGTAGGTGTGATCCTGGAAGG +
Preference number: 6 (lower is better)
Translates to: GNGFYKGQSWLC*REKGRRCDPGR
Trigger: CCTTCCAGGATCACACCTACGACCTTTCTCTCTCCAACAGAGCCAACTTTGCCCTTTGTAAAAACCGTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp GCTGTTGTATATCTGGCTGTAGTAGCATCATTGGCAGTGGTACCTTaGCCCTCTGGAGATGCTTTCAGTGGGGTGATATTGGTAGTTGCG +
Preference number: 6 (lower is better)
Translates to: AVVYLAVVASLAVVP*PSGDAFSGVILVVA
Trigger: CGCAACTACCAATATCACCCCACTGAAAGCATCTCCAGAGGGCAAAGGTACCACTGCCAATGATGCTACTACAGCCAGATATACAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 72 bp GCCTTAGCTGTCACAGGAGTGGAGAGTCTCAGTGAATaGAATGGTGTTTCTGTCAGAGAAGGAACTGCCATG +
Preference number: 6 (lower is better)
Translates to: ALAVTGVESLSE*NGVSVREGTAM
Trigger: CATGGCAGTTCCTTCTCTGACAGAAACACCATTTCATTCACTGAGACTCTCCACTCCTGTGACAGCTAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 72 bp CTCAGCCTTAGCTGTCACAGGAGTGGAGAGTCTCAGTaGATGAAATGGTGTTTCTGTCAGAGAAGGAACTGC +
Preference number: 6 (lower is better)
Translates to: LSLSCHRSGESQ*MKWCFCQRRNC
Trigger: GCAGTTCCTTCTCTGACAGAAACACCATTTCATTCACTGAGACTCTCCACTCCTGTGACAGCTAAGGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS GCA 72 bp AGTAAGAATGTCAGGCTCATTGTGCCTTTGAGGTCATaGAGGATCATCTTCCGCCGAGTCTTCTGGATTTGG +
Preference number: 6 (lower is better)
Translates to: SKNVRLIVPLRS*RIIFRRVFWIW
Trigger: CCAAATCCAGAAGACTCGGCGGAAGATGATCCTGCATGACCTCAAAGGCACAATGAGCCTGACATTCTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp TTCAGGAACAAAGCAGCGCAGTGTCCTGTCAACAGTTaGGATGATCTTGTTGACAAGCCAGACGTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: FRNKAAQCPVNS*DDLVDKPDVFF
Trigger: GAAGAAGACGTCTGGCTTGTCAACAAGATCATCCCAACTGTTGACAGGACACTGCGCTGCTTTGTTCCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS CCA 72 bp CAAGCTGGCAACAACTCCACCACCACTGAAAGTATATaGGAAGCTGAGAGCATAGGTAGAAGTCTCCTCTAC +
Preference number: 6 (lower is better)
Translates to: QAGNNSTTTESI*EAESIGRSLLY
Trigger: GTAGAGGAGACTTCTACCTATGCTCTCAGCTTCCCATATACTTTCAGTGGTGGTGGAGTTGTTGCCAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 72 bp AAGCAGCGCAGTGTCCTGTCAACAGTTGGGATGATCTaGTTGACAAGCCAGACGTCTTCTTCCCAACTAACT +
Preference number: 6 (lower is better)
Translates to: KQRSVLSTVGMI*LTSQTSSSQLT
Trigger: AGTTAGTTGGGAAGAAGACGTCTGGCTTGTCAACAAGATCATCCCAACTGTTGACAGGACACTGCGCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS CAA 72 bp TATCTGGCTGTAGTAGCATCATTGGCAGTGGTACCTTaGCCCTCTGGAGATGCTTTCAGTGGGGTGATATTG +
Preference number: 6 (lower is better)
Translates to: YLAVVASLAVVP*PSGDAFSGVIL
Trigger: CAATATCACCCCACTGAAAGCATCTCCAGAGGGCAAAGGTACCACTGCCAATGATGCTACTACAGCCAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 72 bp CTAGGGGTTTTTCCCAGGGATATGGTCATCTGGTCTTaGTCGGAAGATAAGACAGAGGTGCTAGTCACCAAC +
Preference number: 6 (lower is better)
Translates to: LGVFPRDMVIWS*SEDKTEVLVTN
Trigger: GTTGGTGACTAGCACCTCTGTCTTATCTTCCGACAAAGACCAGATGACCATATCCCTGGGAAAAACCCCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp TCCATAGTTCTAGGGGTTTTTCCCAGGGATATGGTCATCTGGTCTTaGTCGGAAGATAAGACAGAGGTGCTAGTCACCAACTGGATGGAC +
Preference number: 6 (lower is better)
Translates to: SIVLGVFPRDMVIWS*SEDKTEVLVTNWMD
Trigger: GTCCATCCAGTTGGTGACTAGCACCTCTGTCTTATCTTCCGACAAAGACCAGATGACCATATCCCTGGGAAAAACCCCTAGAACTATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 72 bp ACAGGCTCAGGTGGGAATGATGATGCAGTCCCAACATaGGTAGATGCAGGTGAAGTCTTTTCCACTGTAAAC +
Preference number: 6 (lower is better)
Translates to: TGSGGNDDAVPT*VDAGEVFSTVN
Trigger: GTTTACAGTGGAAAAGACTTCACCTGCATCTACTCATGTTGGGACTGCATCATCATTCCCACCTGAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 72 bp GACAAGAGTGTGTGTAGATGGGGTTACTGTATCAACTaGGGTAGAGAAAAGGGTGGTCTCAGCCTTAGCTGT +
Preference number: 6 (lower is better)
Translates to: DKSVCRWGYCIN*GREKGGLSLSC
Trigger: ACAGCTAAGGCTGAGACCACCCTTTTCTCTACCTCAGTTGATACAGTAACCCCATCTACACACACTCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 72 bp GAAGGTGACATAGTCTTTCTGCTGAAGGATGAAGGATaGGACACAGTCCTGGGGTTGGCAGTTATTGTGGTT +
Preference number: 6 (lower is better)
Translates to: EGDIVFLLKDEG*DTVLGLAVIVV
Trigger: AACCACAATAACTGCCAACCCCAGGACTGTGTCTCATCCTTCATCCTTCAGCAGAAAGACTATGTCACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS GCA 72 bp GGAGTTTACTATCATTTCCACAGTCCTGGGAGTATATaGTGGAAGGGCACTCGTGCTTTCCTTTTCAGGACA +
Preference number: 6 (lower is better)
Translates to: GVYYHFHSPGSI*WKGTRAFLFRT
Trigger: TGTCCTGAAAAGGAAAGCACGAGTGCCCTTCCAGCATATACTCCCAGGACTGTGGAAATGATAGTAAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS GCA 72 bp TGGAGAGAGAAAGGTCGTAGGTGTGATCCTGGAAGGTaGCTCTATCATTTCTGTAGTGAAAGCAGAGGAAAC +
Preference number: 6 (lower is better)
Translates to: WREKGRRCDPGR*LYHFCSESRGN
Trigger: GTTTCCTCTGCTTTCACTACAGAAATGATAGAGGCACCTTCCAGGATCACACCTACGACCTTTCTCTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp TCACATAGGTGGAGTTTACTATCATTTCCACAGTCCTaGGAGTATATGCTGGAAGGGCACTCGTGCTTTCCT +
Preference number: 6 (lower is better)
Translates to: SHRWSLLSFPQS*EYMLEGHSCFP
Trigger: AGGAAAGCACGAGTGCCCTTCCAGCATATACTCCCAGGACTGTGGAAATGATAGTAAACTCCACCTATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp AATGGTGGTGGGAACGGTTTTTACAAAGGGCAAAGTTaGCTCTGTTGGAGAGAGAAAGGTCGTAGGTGTGAT +
Preference number: 6 (lower is better)
Translates to: NGGGNGFYKGQS*LCWREKGRRCD
Trigger: ATCACACCTACGACCTTTCTCTCTCCAACAGAGCCAACTTTGCCCTTTGTAAAAACCGTTCCCACCACCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 72 bp CAGCGCAGTGTCCTGTCAACAGTTGGGATGATCTTGTaGACAAGCCAGACGTCTTCTTCCCAACTAACTATA +
Preference number: 6 (lower is better)
Translates to: QRSVLSTVGMIL*TSQTSSSQLTI
Trigger: TATAGTTAGTTGGGAAGAAGACGTCTGGCTTGTCAACAAGATCATCCCAACTGTTGACAGGACACTGCGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS CAA 90 bp GGAACAAAGCAGCGCAGTGTCCTGTCAACAGTTGGGATGATCTTGTaGACAAGCCAGACGTCTTCTTCCCAACTAACTATATTTCCATCT +
Preference number: 6 (lower is better)
Translates to: GTKQRSVLSTVGMIL*TSQTSSSQLTIFPS
Trigger: AGATGGAAATATAGTTAGTTGGGAAGAAGACGTCTGGCTTGTCAACAAGATCATCCCAACTGTTGACAGGACACTGCGCTGCTTTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS CAA 90 bp TCAGGAACAAAGCAGCGCAGTGTCCTGTCAACAGTTGGGATGATCTaGTTGACAAGCCAGACGTCTTCTTCCCAACTAACTATATTTCCA +
Preference number: 6 (lower is better)
Translates to: SGTKQRSVLSTVGMI*LTSQTSSSQLTIFP
Trigger: TGGAAATATAGTTAGTTGGGAAGAAGACGTCTGGCTTGTCAACAAGATCATCCCAACTGTTGACAGGACACTGCGCTGCTTTGTTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS CAA 90 bp GCCTTTGAGGTCATGCAGGATCATCTTCCGCCGAGTCTTCTGGATTaGGGATTTCACAGAATTCAGTTGAACAAGAACAGTGCAGAACAT +
Preference number: 6 (lower is better)
Translates to: AFEVMQDHLPPSLLD*GFHRIQLNKNSAEH
Trigger: ATGTTCTGCACTGTTCTTGTTCAACTGAATTCTGTGAAATCCCAAATCCAGAAGACTCGGCGGAAGATGATCCTGCATGACCTCAAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp GGAAAGCTTATTTCTGAAGGTGTGCCTTGTGCAGAGCCTAAAGATTaGAAAGTGGAGCTAGTTGCAGTTGACTTGAGAGATGGCGTCAAC +
Preference number: 6 (lower is better)
Translates to: GKLISEGVPCAEPKD*KVELVAVDLRDGVN
Trigger: GTTGACGCCATCTCTCAAGTCAACTGCAACTAGCTCCACTTTCAAATCTTTAGGCTCTGCACAAGGCACACCTTCAGAAATAAGCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 72 bp TGGGTAGGCACAATAACAATGGTTGTGGAAGCAGTCTaGTCCAAAGGTGGTACCAATGCTGTGGTCATTGTA +
Preference number: 6 (lower is better)
Translates to: WVGTITMVVEAV*SKGGTNAVVIV
Trigger: TACAATGACCACAGCATTGGTACCACCTTTGGATCAGACTGCTTCCACAACCATTGTTATTGTGCCTACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp ATAGTTCTAGGGGTTTTTCCCAGGGATATGGTCATCTaGTCTTTGTCGGAAGATAAGACAGAGGTGCTAGTC +
Preference number: 6 (lower is better)
Translates to: IVLGVFPRDMVI*SLSEDKTEVLV
Trigger: GACTAGCACCTCTGTCTTATCTTCCGACAAAGACCAGATGACCATATCCCTGGGAAAAACCCCTAGAACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp GTTTACTATCATTTCCACAGTCCTGGGAGTATATGCTaGAAGGGCACTCGTGCTTTCCTTTTCAGGACACAA +
Preference number: 6 (lower is better)
Translates to: VYYHFHSPGSIC*KGTRAFLFRTQ
Trigger: TTGTGTCCTGAAAAGGAAAGCACGAGTGCCCTTCCAGCATATACTCCCAGGACTGTGGAAATGATAGTAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp GTCATCTGTGACATTTATAGACATAGGGAGAGAAGTTaGGAAGCCAGTAGTGATACCACCCAGTGTAGGTGT +
Preference number: 6 (lower is better)
Translates to: VICDIYRHRERS*EASSDTTQCRC
Trigger: ACACCTACACTGGGTGGTATCACTACTGGCTTCCCAACTTCTCTCCCTATGTCTATAAATGTCACAGATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 72 bp CATAAACTCTTCGTTTTCCAGGATGTGGTCCCAGAGTaGAAAGTAGTACAAGCTGCCAGGAAAGCTACGCAT +
Preference number: 6 (lower is better)
Translates to: HKLFVFQDVVPE*KVVQAARKATH
Trigger: ATGCGTAGCTTTCCTGGCAGCTTGTACTACTTTCAACTCTGGGACCACATCCTGGAAAACGAAGAGTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS CAA 72 bp TGGGAAGCTGAGAGCATAGGTAGAAGTCTCCTCTACTaGAGATATTGGTTGAGTTGCTTCTGGTGTAGACGT +
Preference number: 6 (lower is better)
Translates to: WEAESIGRSLLY*RYWLSCFWCRR
Trigger: ACGTCTACACCAGAAGCAACTCAACCAATATCTCAAGTAGAGGAGACTTCTACCTATGCTCTCAGCTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 72 bp TGTCATTCTTGTTCCCAGAACTGGAAATTCAACCATTaGGGATGTGGGAGGAGGAGAGGTCTTTGGAGTAGA +
Preference number: 6 (lower is better)
Translates to: CHSCSQNWKFNH*GCGRRRGLWSR
Trigger: TCTACTCCAAAGACCTCTCCTCCTCCCACATCCCAAATGGTTGAATTTCCAGTTCTGGGAACAAGAATGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp CAGTACTATGAGGTGAATAAACAAATGATGTCAAAGAGGGTAGAGTaGCACTGGATGGGGTCCATGGAGGGTATGAAACAGGGGTATTCA +
Preference number: 6 (lower is better)
Translates to: QYYEVNKQMMSKRVE*HWMGSMEGMKQGYS
Trigger: TGAATACCCCTGTTTCATACCCTCCATGGACCCCATCCAGTGCAACTCTACCCTCTTTGACATCATTTGTTTATTCACCTCATAGTACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp ATTACTAGATGTCATTCTTGTTCCCAGAACTGGAAATTCAACCATTaGGGATGTGGGAGGAGGAGAGGTCTTTGGAGTAGAGATCTCAGC +
Preference number: 6 (lower is better)
Translates to: ITRCHSCSQNWKFNH*GCGRRRGLWSRDLS
Trigger: GCTGAGATCTCTACTCCAAAGACCTCTCCTCCTCCCACATCCCAAATGGTTGAATTTCCAGTTCTGGGAACAAGAATGACATCTAGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS GCA 72 bp GCATATATCACAGGTGTGACATCCAATGTAGATGTTTaGATGGTCATAGTAGTCCTGGGGGTAACTGAAGAC +
Preference number: 6 (lower is better)
Translates to: AYITGVTSNVDV*MVIVVLGVTED
Trigger: GTCTTCAGTTACCCCCAGGACTACTATGACCATGCAAACATCTACATTGGATGTCACACCTGTGATATATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp AAAATTTGTAGATGTCAATTCTGTTTCAGCTGTCCTTaGGGCAGGTGTGGTCTCAATAAGCCTAGTTGGGAG +
Preference number: 6 (lower is better)
Translates to: KICRCQFCFSCP*GRCGLNKPSWE
Trigger: CTCCCAACTAGGCTTATTGAGACCACACCTGCCCCAAGGACAGCTGAAACAGAATTGACATCTACAAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp TATCCTGGCCATATGAGACAGAGTGAGTCACATAGGTaGAGTTTACTATCATTTCCACAGTCCTGGGAGTAT +
Preference number: 6 (lower is better)
Translates to: YPGHMRQSESHR*SLLSFPQSWEY
Trigger: ATACTCCCAGGACTGTGGAAATGATAGTAAACTCCACCTATGTGACTCACTCTGTCTCATATGGCCAGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp CATAGAGGATTCTCTAGGAAGCATTGTAGGTACATTTaGAACAGAAAAGGCTGTAGTGATCCTGTCGGAGAG +
Preference number: 6 (lower is better)
Translates to: HRGFSRKHCRYI*NRKGCSDPVGE
Trigger: CTCTCCGACAGGATCACTACAGCCTTTTCTGTTCCAAATGTACCTACAATGCTTCCTAGAGAATCCTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp TGTGGGTCCAGAAGCACTCTTAAAGCTAGTCAGAGATaGGGAAACCTGAATATTGAAGGAAGTATGGAGACT +
Preference number: 6 (lower is better)
Translates to: CGSRSTLKASQR*GNLNIEGSMET
Trigger: AGTCTCCATACTTCCTTCAATATTCAGGTTTCCCCATCTCTGACTAGCTTTAAGAGTGCTTCTGGACCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp AATAAACAAATGATGTCAAAGAGGGTAGAGTTGCACTaGATGGGGTCCATGGAGGGTATGAAACAGGGGTAT +
Preference number: 6 (lower is better)
Translates to: NKQMMSKRVELH*MGSMEGMKQGY
Trigger: ATACCCCTGTTTCATACCCTCCATGGACCCCATCCAGTGCAACTCTACCCTCTTTGACATCATTTGTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 72 bp CTAATTTGCCCTTCACACCATCCCATATCAAGCATATaGTATGCCATTGAAATGAAGCCAGGTGGTGACGGA +
Preference number: 6 (lower is better)
Translates to: LICPSHHPISSI*YAIEMKPGGDG
Trigger: TCCGTCACCACCTGGCTTCATTTCAATGGCATACAATATGCTTGATATGGGATGGTGTGAAGGGCAAATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS CAA 72 bp GTCATGCAGGATCATCTTCCGCCGAGTCTTCTGGATTaGGGATTTCACAGAATTCAGTTGAACAAGAACAGT +
Preference number: 6 (lower is better)
Translates to: VMQDHLPPSLLD*GFHRIQLNKNS
Trigger: ACTGTTCTTGTTCAACTGAATTCTGTGAAATCCCAAATCCAGAAGACTCGGCGGAAGATGATCCTGCATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp AGAACCTTCAGCTGTGGGTATGTTCCAGGAAGTCATAAGCAGAGGTaGGGTATTACTAGATGTCATTCTTGTTCCCAGAACTGGAAATTC +
Preference number: 6 (lower is better)
Translates to: RTFSCGYVPGSHKQR*GITRCHSCSQNWKF
Trigger: GAATTTCCAGTTCTGGGAACAAGAATGACATCTAGTAATACCCAACCTCTGCTTATGACTTCCTGGAACATACCCACAGCTGAAGGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 72 bp ACCATCCCATATCAAGCATATTGTATGCCATTGAAATaGAGCCAGGTGGTGACGGATAGAAAAGGTCTTTCC +
Preference number: 6 (lower is better)
Translates to: TIPYQAYCMPLK*SQVVTDRKGLS
Trigger: GGAAAGACCTTTTCTATCCGTCACCACCTGGCTTCATTTCAATGGCATACAATATGCTTGATATGGGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS TCA 72 bp CAAATTTCCATCAGAGGGAGTCCCAAGTGGAATCTCTaGAGGCGAATGTGTTTGGTGACTGGAAATTTTTGT +
Preference number: 6 (lower is better)
Translates to: QISIRGSPKWNL*RRMCLVTGNFC
Trigger: ACAAAAATTTCCAGTCACCAAACACATTCGCCTTCAGAGATTCCACTTGGGACTCCCTCTGATGGAAATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 72 bp AGACATTTCTGGAATGTGAACACCTACTGTGTTACTTaGGGTCAAGGTTGGTGTAATCTGTGTGCTTCCAGA +
Preference number: 6 (lower is better)
Translates to: RHFWNVNTYCVT*GQGWCNLCASR
Trigger: TCTGGAAGCACACAGATTACACCAACCTTGACCTCAAGTAACACAGTAGGTGTTCACATTCCAGAAATGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 72 bp AAAAGGATATGTCACCCCAGTGGATATGAGTGGAAATaGGGCTCCAGGAACAGTGGATGTAGTAGTCATTAT +
Preference number: 6 (lower is better)
Translates to: KRICHPSGYEWK*GSRNSGCSSHY
Trigger: ATAATGACTACTACATCCACTGTTCCTGGAGCCTCATTTCCACTCATATCCACTGGGGTGACATATCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 72 bp AAACAAGCAGGAAGTAATGAAGTGCCACTGCAGCTGTaGTACAAACTCCCACTTTCTGAAATGATGACAACC +
Preference number: 6 (lower is better)
Translates to: KQAGSNEVPLQL*YKLPLSEMMTT
Trigger: GGTTGTCATCATTTCAGAAAGTGGGAGTTTGTATCACAGCTGCAGTGGCACTTCATTACTTCCTGCTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp CCAGCTGTGGAGATAGGGAGTGCCCCAGTATTTGTGGATTTTTGTTaGAGACAAGGTGTTGTAGACATAGATGTTGACTCAATAGTTGAA +
Preference number: 6 (lower is better)
Translates to: PAVEIGSAPVFVDFC*RQGVVDIDVDSIVE
Trigger: TTCAACTATTGAGTCAACATCTATGTCTACAACACCTTGTCTCAAACAAAAATCCACAAATACTGGGGCACTCCCTATCTCCACAGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp GGGAAGTTGCTTCTTTTCTTGTCACAGTGGCATTTAATCTTTGTGTaGTTGCTGACTTTGGTACAGGGGTCGTTGTACCTCCAAATACAA +
Preference number: 6 (lower is better)
Translates to: GKLLLFLSQWHLIFV*LLTLVQGSLYLQIQ
Trigger: TTGTATTTGGAGGTACAACGACCCCTGTACCAAAGTCAGCAACAACACAAAGATTAAATGCCACTGTGACAAGAAAAGAAGCAACTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 72 bp GAGATAGGGAGTGCCCCAGTATTTGTGGATTTTTGTTaGAGACAAGGTGTTGTAGACATAGATGTTGACTCA +
Preference number: 6 (lower is better)
Translates to: EIGSAPVFVDFC*RQGVVDIDVDS
Trigger: TGAGTCAACATCTATGTCTACAACACCTTGTCTCAAACAAAAATCCACAAATACTGGGGCACTCCCTATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 72 bp TCACAGTGGCATTTAATCTTTGTGTTGTTGCTGACTTaGGTACAGGGGTCGTTGTACCTCCAAATACAATTG +
Preference number: 6 (lower is better)
Translates to: SQWHLIFVLLLT*VQGSLYLQIQL
Trigger: CAATTGTATTTGGAGGTACAACGACCCCTGTACCAAAGTCAGCAACAACACAAAGATTAAATGCCACTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 72 bp CCTAAAGATTTGAAAGTGGAGCTAGTTGCAGTTGACTaGAGAGATGGCGTCAACAGTTTGTGCTCAAAGATT +
Preference number: 6 (lower is better)
Translates to: PKDLKVELVAVD*RDGVNSLCSKI
Trigger: AATCTTTGAGCACAAACTGTTGACGCCATCTCTCAAGTCAACTGCAACTAGCTCCACTTTCAAATCTTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp CTGACAAACACAACTGTATGGTACATAGGAAATTGTAGCCATTTCTaGTCCTTCTCTCTGTTCCAAAATAGCTCGATCCATGACCATCTC +
Preference number: 6 (lower is better)
Translates to: LTNTTVWYIGNCSHF*SFSLFQNSSIHDHL
Trigger: GAGATGGTCATGGATCGAGCTATTTTGGAACAGAGAGAAGGACAAGAAATGGCTACAATTTCCTATGTACCATACAGTTGTGTTTGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp TGTGCAGAGCCTAAAGATTTGAAAGTGGAGCTAGTTGCAGTTGACTaGAGAGATGGCGTCAACAGTTTGTGCTCAAAGATTTTCTTTAGT +
Preference number: 6 (lower is better)
Translates to: CAEPKDLKVELVAVD*RDGVNSLCSKIFFS
Trigger: ACTAAAGAAAATCTTTGAGCACAAACTGTTGACGCCATCTCTCAAGTCAACTGCAACTAGCTCCACTTTCAAATCTTTAGGCTCTGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp GTTCCAGAAACTATGGAGAAATTAGCAAACCATGGTGATGTCAATTaGGATACAGCTGTTGTATATCTGGCTGTAGTAGCATCATTGGCA +
Preference number: 6 (lower is better)
Translates to: VPETMEKLANHGDVN*DTAVVYLAVVASLA
Trigger: TGCCAATGATGCTACTACAGCCAGATATACAACAGCTGTATCCAAATTGACATCACCATGGTTTGCTAATTTCTCCATAGTTTCTGGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp TGGCATTTAATCTTTGTGTTGTTGCTGACTTTGGTACAGGGGTCGTaGTACCTCCAAATACAATTGCACCATTTATTTCTGTTTGTGTGG +
Preference number: 6 (lower is better)
Translates to: WHLIFVLLLTLVQGS*YLQIQLHHLFLFVW
Trigger: CCACACAAACAGAAATAAATGGTGCAATTGTATTTGGAGGTACAACGACCCCTGTACCAAAGTCAGCAACAACACAAAGATTAAATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp CTTTTCTTGTCACAGTGGCATTTAATCTTTGTGTTGTTGCTGACTTaGGTACAGGGGTCGTTGTACCTCCAAATACAATTGCACCATTTA +
Preference number: 6 (lower is better)
Translates to: LFLSQWHLIFVLLLT*VQGSLYLQIQLHHL
Trigger: TAAATGGTGCAATTGTATTTGGAGGTACAACGACCCCTGTACCAAAGTCAGCAACAACACAAAGATTAAATGCCACTGTGACAAGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp AAGTTGCTTCTTTTCTTGTCACAGTGGCATTTAATCTTTGTGTTGTaGCTGACTTTGGTACAGGGGTCGTTGTACCTCCAAATACAATTG +
Preference number: 6 (lower is better)
Translates to: KLLLFLSQWHLIFVL*LTLVQGSLYLQIQL
Trigger: CAATTGTATTTGGAGGTACAACGACCCCTGTACCAAAGTCAGCAACAACACAAAGATTAAATGCCACTGTGACAAGAAAAGAAGCAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp ACCTCAGGTTGTGTCCTAAGTGAATGCAAGTGTGAAAAAGTTGTATaGATGTCCATAGGATTTGATATCCTTGTTGAGCTGGAAGTTGTG +
Preference number: 6 (lower is better)
Translates to: TSGCVLSECKCEKVV*MSIGFDILVELEVV
Trigger: CACAACTTCCAGCTCAACAAGGATATCAAATCCTATGGACATCAATACAACTTTTTCACACTTGCATTCACTTAGGACACAACCTGAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 90 bp AGCAAGATCCACAATCTTGTCAGGAAGTTCTTGAAGCAATTTGCATaGTTTAAACTTTGGCTTTTCCCACTGAGATTTGCCCGTGTTGAT +
Preference number: 6 (lower is better)
Translates to: SKIHNLVRKFLKQFA*FKLWLFPLRFARVD
Trigger: ATCAACACGGGCAAATCTCAGTGGGAAAAGCCAAAGTTTAAACAATGCAAATTGCTTCAAGAACTTCCTGACAAGATTGTGGATCTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 72 bp GGTTCCAGAAACTATGGAGAAATTAGCAAACCATGGTaGTGTCAATTTGGATACAGCTGTTGTATATCTGGC +
Preference number: 6 (lower is better)
Translates to: GSRNYGEISKPW*CQFGYSCCISG
Trigger: GCCAGATATACAACAGCTGTATCCAAATTGACATCACCATGGTTTGCTAATTTCTCCATAGTTTCTGGAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS GCA 72 bp GTTGCAGTTGACTTGAGAGATGGCGTCAACAGTTTGTaGTCAAAGATTTTCTTTAGTCCCTCCTGTTTATAT +
Preference number: 6 (lower is better)
Translates to: VAVDLRDGVNSL*SKIFFSPSCLY
Trigger: ATATAAACAGGAGGGACTAAAGAAAATCTTTGAGCACAAACTGTTGACGCCATCTCTCAAGTCAACTGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp GTGGTCTCAATAAGCCTAGTTGGGAGAGTCAATGAATaGACTGTAAATGCTATTTTCATATCAGTTGTTGCC +
Preference number: 6 (lower is better)
Translates to: VVSISLVGRVNE*TVNAIFISVVA
Trigger: GGCAACAACTGATATGAAAATAGCATTTACAGTCCATTCATTGACTCTCCCAACTAGGCTTATTGAGACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp TCCATGGAGGGTATGAAACAGGGGTATTCAAAGATGTaGCATAGTTTGTTAAGGAAGTCTTTTCTAACAAGG +
Preference number: 6 (lower is better)
Translates to: SMEGMKQGYSKM*HSLLRKSFLTR
Trigger: CCTTGTTAGAAAAGACTTCCTTAACAAACTATGCCACATCTTTGAATACCCCTGTTTCATACCCTCCATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 72 bp ACTGCAACGTGTTCACAGTTTACTAATAACGTCAATTaGTCTTGTGTGAAGTTTCCATGTGTGAAGTTGCCA +
Preference number: 6 (lower is better)
Translates to: TATCSQFTNNVN*SCVKFPCVKLP
Trigger: TGGCAACTTCACACATGGAAACTTCACACAAGATCAATTGACGTTATTAGTAAACTGTGAACACGTTGCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS GCA 72 bp GAAGTGGCTGTACAGGGACTTTTCAAACAACCTGGATaGATTGTTTTAGAAGATTTAGTTATCACTATTGGG +
Preference number: 6 (lower is better)
Translates to: EVAVQGLFKQPG*IVLEDLVITIG
Trigger: CCCAATAGTGATAACTAAATCTTCTAAAACAATGCATCCAGGTTGTTTGAAAAGTCCCTGTACAGCCACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp TTCATGGAATTGGTAGTATTGTCTATGGATATACTCTaGGTAGGCAGAGAGATGGCTGATGAAGTTGATAAA +
Preference number: 6 (lower is better)
Translates to: FMELVVLSMDIL*VGREMADEVDK
Trigger: TTTATCAACTTCATCAGCCATCTCTCTGCCTACCCAGAGTATATCCATAGACAATACTACCAATTCCATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp CCCAGAAGTGGCTGTACAGGGACTTTTCAAACAACCTaGATGCATTGTTTTAGAAGATTTAGTTATCACTAT +
Preference number: 6 (lower is better)
Translates to: PRSGCTGTFQTT*MHCFRRFSYHY
Trigger: ATAGTGATAACTAAATCTTCTAAAACAATGCATCCAGGTTGTTTGAAAAGTCCCTGTACAGCCACTTCTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CCA 72 bp AAAGATGTTGATAATGAAGGGTTCTCAGAAAGCCCATaGTTAGGAAGAATTCCTGACATAGGAATTGATGAC +
Preference number: 6 (lower is better)
Translates to: KDVDNEGFSESP*LGRIPDIGIDD
Trigger: GTCATCAATTCCTATGTCAGGAATTCTTCCTAACCATGGGCTTTCTGAGAACCCTTCATTATCAACATCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 72 bp ACTATGGAGAAATTAGCAAACCATGGTGATGTCAATTaGGATACAGCTGTTGTATATCTGGCTGTAGTAGCA +
Preference number: 6 (lower is better)
Translates to: TMEKLANHGDVN*DTAVVYLAVVA
Trigger: TGCTACTACAGCCAGATATACAACAGCTGTATCCAAATTGACATCACCATGGTTTGCTAATTTCTCCATAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 72 bp GTTATTAGTAATATAAGAGAAGGCCATCCAATACCTTaGGTTGTCATCCATGAATACCAGATCAATGCATGC +
Preference number: 6 (lower is better)
Translates to: VISNIREGHPIP*VVIHEYQINAC
Trigger: GCATGCATTGATCTGGTATTCATGGATGACAACTCAAGGTATTGGATGGCCTTCTCTTATATTACTAATAAC
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS CCA 72 bp GAATGTGCAGTATTTTGTGGTTTTACTCCAGTAATTTaGGATGGAGTGGTCATATCTATCTGTTGTGAAACA +
Preference number: 6 (lower is better)
Translates to: ECAVFCGFTPVI*DGVVISICCET
Trigger: TGTTTCACAACAGATAGATATGACCACTCCATCCCAAATTACTGGAGTAAAACCACAAAATACTGCACATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 72 bp GGTATGAAACAGGGGTATTCAAAGATGTGGCATAGTTaGTTAAGGAAGTCTTTTCTAACAAGGAAGTCATCT +
Preference number: 6 (lower is better)
Translates to: GMKQGYSKMWHS*LRKSFLTRKSS
Trigger: AGATGACTTCCTTGTTAGAAAAGACTTCCTTAACAAACTATGCCACATCTTTGAATACCCCTGTTTCATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS CAA 72 bp ATTATTATTCTCAAAATCCCAAAAGGCACAGTGAACTaGACCATAATTCTGGTTTCCTCCAATATGCTGCAG +
Preference number: 6 (lower is better)
Translates to: IIILKIPKGTVN*TIILVSSNMLQ
Trigger: CTGCAGCATATTGGAGGAAACCAGAATTATGGTCAAGTTCACTGTGCCTTTTGGGATTTTGAGAATAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6
CDS TCA 72 bp GATGTGTTCTTTCATTGTCTAAGTCTCATATTGCTGTaGAGATTACATAACACACAGTATGTAAAGTGCTTG +
Preference number: 6 (lower is better)
Translates to: DVFFHCLSLILL*RLHNTQYVKCL
Trigger: CAAGCACTTTACATACTGTGTGTTATGTAATCTTCACAGCAATATGAGACTTAGACAATGAAAGAACACATC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370652.5
ENST00000394143.6
CDS TCA 72 bp GTTGAAAATAAAGATGTTGTCTTCGTAACAGCCGACTaGGATTTAATTGCTGAAGTTGTAGATACAACTGAA +
Preference number: 6 (lower is better)
Translates to: VENKDVVFVTAD*DLIAEVVDTTE
Trigger: TTCAGTTGTATCTACAACTTCAGCAATTAAATCTCAGTCGGCTGTTACGAAGACAACATCTTTATTTTCAAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370652.5
ENST00000394141.1
ENST00000394143.6