RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRG3 (Homo sapiens)

Ensembl gene IDs: ENSG00000182885

Ensembl transcript IDs: ENST00000333493.9, ENST00000450388.7, ENST00000565579.5, ENST00000565902.1, ENST00000567991.5, ENST00000568245.5, ENST00000569977.1

Found 466 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCACTCTGAACACGGGGGTCTCTTCCAGGAGGGTGGGCTCTGATTaGATGGGCAGAGACCAGGGGCAGACTGGGTGGGAGGATCAACTC +
Preference number: 1 (lower is better)
Translates to: STLNTGVSSRRVGSD*MGRDQGQTGWEDQL
Trigger: GAGTTGATCCTCCCACCCAGTCTGCCCCTGGTCTCTGCCCATCCAATCAGAGCCCACCCTCCTGGAAGAGACCCCCGTGTTCAGAGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR GCA 90 bp CTCAGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTaGCAGCACTCTGAACACGGGGGTCTCTTCCAGGAGGGTGGGCTC +
Preference number: 1 (lower is better)
Translates to: LSGSLKCSVPGHVQG*QHSEHGGLFQEGGL
Trigger: GAGCCCACCCTCCTGGAAGAGACCCCCGTGTTCAGAGTGCTGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR TCA 90 bp GGGCTCCTTCCAGGGCTATGCCAGCAACAGACTCTCCTCCCTTGCTaGGACCAGAAGGTGAGTGAGGGCTTTGCAATGAGGGCAGGGCAT +
Preference number: 1 (lower is better)
Translates to: GLLPGLCQQQTLLPC*DQKVSEGFAMRAGH
Trigger: ATGCCCTGCCCTCATTGCAAAGCCCTCACTCACCTTCTGGTCTCAGCAAGGGAGGAGAGTCTGTTGCTGGCATAGCCCTGGAAGGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR TCA 90 bp TTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCCAGCACTCTaGACACGGGGGTCTCTTCCAGGAGGGTGGGCTCTGATTGGATGG +
Preference number: 1 (lower is better)
Translates to: FEMQCPWTRAGLPAL*TRGSLPGGWALIGW
Trigger: CCATCCAATCAGAGCCCACCCTCCTGGAAGAGACCCCCGTGTTCAGAGTGCTGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR TCA 90 bp CCCAGGTGTGCTGAGCCCCAGATTGTTTGCTTTCTACCTCTACGATaGCAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAGTC +
Preference number: 1 (lower is better)
Translates to: PRCAEPQIVCFLPLR*QQVRGRATHVAVRV
Trigger: GACTCTGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAGGTAGAAAGCAAACAATCTGGGGCTCAGCACACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR TCA 90 bp CTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTaGTGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGC +
Preference number: 1 (lower is better)
Translates to: LTWTLGPIVGSGWDL*CHVVQPGPILSLPS
Trigger: GCTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
3UTR CCA 90 bp AGCGGACCACAGACCTGTTGCCTGGCAGGGATCGAAAAAGGCTCTTaGGAAGTCGCACTCTGTCAGGGGGCTTGTCCTCGTCCTTCATCA +
Preference number: 1 (lower is better)
Translates to: SGPQTCCLAGIEKGS*EVALCQGACPRPSS
Trigger: TGATGAAGGACGAGGACAAGCCCCCTGACAGAGTGCGACTTCCCAAGAGCCTTTTTCGATCCCTGCCAGGCAACAGGTCTGTGGTCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568245.5
3UTR TCA 90 bp GAGCCAGAGCTGAGTCCATATTGCAGGGCCGTGCCTTCCTATTCTTaGGATGCGGAGTGGGCCTGGTCCAATCTTGCAGTAGAGGAGGAG +
Preference number: 1 (lower is better)
Translates to: EPELSPYCRAVPSYS*DAEWAWSNLAVEEE
Trigger: CTCCTCCTCTACTGCAAGATTGGACCAGGCCCACTCCGCATCTCAAGAATAGGAAGGCACGGCCCTGCAATATGGACTCAGCTCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR GCA 90 bp CGTGCCTTCCTATTCTTGAGATGCGGAGTGGGCCTGGTCCAATCTTaGAGTAGAGGAGGAGACTGTGGTGCTCTGACTTGGGAGGTAAAG +
Preference number: 1 (lower is better)
Translates to: RAFLFLRCGVGLVQS*SRGGDCGALTWEVK
Trigger: CTTTACCTCCCAAGTCAGAGCACCACAGTCTCCTCCTCTACTGCAAGATTGGACCAGGCCCACTCCGCATCTCAAGAATAGGAAGGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR GCA 90 bp AGAGCTGAGTCCATATTGCAGGGCCGTGCCTTCCTATTCTTGAGATaGGGAGTGGGCCTGGTCCAATCTTGCAGTAGAGGAGGAGACTGT +
Preference number: 1 (lower is better)
Translates to: RAESILQGRAFLFLR*GVGLVQSCSRGGDC
Trigger: ACAGTCTCCTCCTCTACTGCAAGATTGGACCAGGCCCACTCCGCATCTCAAGAATAGGAAGGCACGGCCCTGCAATATGGACTCAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR CCA 90 bp CCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTaGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCT +
Preference number: 1 (lower is better)
Translates to: PCKPAYVDSWTYSWI*MGPLMPRGPTWSHP
Trigger: AGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
3UTR GCA 90 bp CTGCCTCGGAACCTGAGAGGGCTCCAGAGAGAAATAGAAGTCTTCTaGAGTGTTGGTGCTGAGGTTCTGGACCAAAGCCTTCAGGAAAGG +
Preference number: 1 (lower is better)
Translates to: LPRNLRGLQREIEVF*SVGAEVLDQSLQER
Trigger: CCTTTCCTGAAGGCTTTGGTCCAGAACCTCAGCACCAACACTGCAGAAGACTTCTATTTCTCTCTGGAGCCCTCTCAGGTTCCGAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568245.5
3UTR CCA 90 bp TTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTaGATCTGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCC +
Preference number: 1 (lower is better)
Translates to: LEPCKPAYVDSWTYS*IWMGPLMPRGPTWS
Trigger: GGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
3UTR CCA 90 bp CTGGTCCAATCTTGCAGTAGAGGAGGAGACTGTGGTGCTCTGACTTaGGAGGTAAAGGATGGTGAACCAGCAGCAGATGAAGACACCTTG +
Preference number: 1 (lower is better)
Translates to: LVQSCSRGGDCGALT*EVKDGEPAADEDTL
Trigger: CAAGGTGTCTTCATCTGCTGCTGGTTCACCATCCTTTACCTCCCAAGTCAGAGCACCACAGTCTCCTCCTCTACTGCAAGATTGGACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR GCA 90 bp TCTTTGCTGGCAGGGGGTCTCAGGACTATAGGAACTTTAGAGCCTTaGAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGG +
Preference number: 1 (lower is better)
Translates to: SLLAGGLRTIGTLEP*KPAYVDSWTYSWIW
Trigger: CCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCTATAGTCCTGAGACCCCCTGCCAGCAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR CCA 90 bp ACTATAGGAACTTTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTaGACCTATAGTTGGATCTGGATGGGACCTCTGATGCCACGTGGT +
Preference number: 1 (lower is better)
Translates to: TIGTLEPCKPAYVDS*TYSWIWMGPLMPRG
Trigger: ACCACGTGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCTATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
3UTR-3UTR CCA 90 bp GGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACACACTCAGGGGCAGACTGGGTaGGAGGATCAACTCCCACCC +
Preference number: 2 (lower is better)
Translates to: GAQVLVAMPSLCSGAPHTQGQTG*EDQLPP
Trigger: GGGTGGGAGTTGATCCTCCCACCCAGTCTGCCCCTG...AGTGTGTGGGGCCCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR TCA 90 bp CTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAGTCAAGGGGCCCCACACACTaGATGAGTGGGAGCACCCCC +
Preference number: 2 (lower is better)
Translates to: LYDDSRSEVGPPTWQSESRGPTH*MSGSTP
Trigger: GGGGGTGCTCCCACTCATTCAGTGTGTGGGGCCCCT...TGACTCTGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR CAA 90 bp AGGCCCAGCAGGGTGAGCACCTTCTTCCGGTTCTTCCCCCGCTCCTaGACCGCTGTAGCACGGGACAGGGTGAAGATCTTCCAGACCACC +
Preference number: 2 (lower is better)
Translates to: RPSRVSTFFRFFPRS*TAVARDRVKIFQTT
Trigger: GGTGGTCTGGAAGATCTTCACCCTGTCCCGTGCTACAGCGGTCAAGGAGCGGGGGAAGAACCGGAAGAAGGTGCTCACCCTGCTGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR-3UTR TCA 90 bp CCTGAATGCCCCTCAAGGTTACAGGCAGCCAGAAGGGGAGTTGTGGGAGGCCAGGGGCTGCCAGCACTCTaGACACGGGGGTCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: PECPSRLQAARRGVVGGQGLPAL*TRGSLP
Trigger: TGGAAGAGACCCCCGTGTTCAGAGTGCTGGCAGCCC...CTGGCCTCCCACAACTCCCCTTCTGGCTGCCTGTAACCTTGAGGGGCATTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR TCA 90 bp GGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACACACTCACCCCCAGGTGTGCTaGGCCCCAGATTGTTTGCTT +
Preference number: 2 (lower is better)
Translates to: GAQVLVAMPSLCSGAPHTHPQVC*APDCLL
Trigger: AAGCAAACAATCTGGGGCTCAGCACACCTGGGGGTG...AGTGTGTGGGGCCCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CCA 90 bp GGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACACACTGAAATGCAGTGTCCCTaGACACGTGCAGGGCTGCCA +
Preference number: 2 (lower is better)
Translates to: GAQVLVAMPSLCSGAPHTEMQCP*TRAGLP
Trigger: TGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTC...AGTGTGTGGGGCCCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR GCA 90 bp GGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACACACTCTCCTTCCAGGGCTATaGCAGCAACAGACTCTCCTC +
Preference number: 2 (lower is better)
Translates to: GAQVLVAMPSLCSGAPHTLLPGL*QQQTLL
Trigger: GAGGAGAGTCTGTTGCTGGCATAGCCCTGGAAGGAG...AGTGTGTGGGGCCCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR GCA 90 bp CTTTCTACCTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTGGACACGTGCAGGGCTaGCAGCACTCTGAACACGGG +
Preference number: 2 (lower is better)
Translates to: LSTSTMTAGQRSGHPRGSGHVQG*QHSEHG
Trigger: CCCGTGTTCAGAGTGCTGGCAGCCCTGCACGTGTCC...ACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAGGTAGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CCA 90 bp AAGGTTACAGGCAGCCAGAAGGGGAGTTGTGGGAGGCCAGTGACAAGGAGGAGGCAGGGGCAGACTGGGTaGGAGGATCAACTCCCACCC +
Preference number: 2 (lower is better)
Translates to: KVTGSQKGSCGRPVTRRRQGQTG*EDQLPP
Trigger: GGGTGGGAGTTGATCCTCCCACCCAGTCTGCCCCTG...CCTCCTCCTTGTCACTGGCCTCCCACAACTCCCCTTCTGGCTGCCTGTAACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CCA 90 bp CCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGTCGGGCCACCCACGTaGCAGTCAGAGTCAGGAGTG +
Preference number: 2 (lower is better)
Translates to: PCSLGAQVLVAMPSLCSGVGPPT*QSESGV
Trigger: CACTCCTGACTCTGACTGCCACGTGGGTGGCCCGAC...CCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CCA 90 bp CCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGAGACCAGGGGCAGACTaGGTGGGAGGATCAACTCCC +
Preference number: 2 (lower is better)
Translates to: PCSLGAQVLVAMPSLCSGRPGAD*VGGSTP
Trigger: GGGAGTTGATCCTCCCACCCAGTCTGCCCCTGGTCT...CCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CCA 90 bp CCTGAATGCCCCTCAAGGTTACAGGCAGCCAGAAGGGGAGTTGTGGGAGGCCAGCACACACTGAATGAGTaGGAGCACCCCCAGGTGTGC +
Preference number: 2 (lower is better)
Translates to: PECPSRLQAARRGVVGGQHTLNE*EHPQVC
Trigger: GCACACCTGGGGGTGCTCCCACTCATTCAGTGTGTG...CTGGCCTCCCACAACTCCCCTTCTGGCTGCCTGTAACCTTGAGGGGCATTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CCA 90 bp GGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGCCTATAGAGGGCGTACATaGTTGTCCCTTCACGGAACC +
Preference number: 2 (lower is better)
Translates to: GTSDATWSNLVPSSPSPAYRGRT*LSLHGT
Trigger: GGTTCCGTGAAGGGACAACCATGTACGCCCTCTATA...GGCTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR-3UTR TCA 90 bp CCCAGGTCCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGACAGAGAGCCAGAGCTaGGTCCATATTGCAGGGCCG +
Preference number: 2 (lower is better)
Translates to: PRSLFSRSSGPSGNAQPLTESQS*VHIAGP
Trigger: CGGCCCTGCAATATGGACTCAGCTCTGGCTCTCTGT...CAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGGACCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR TCA 90 bp TCCATATTGCAGGGCCGTGCCTTCCTATTCTTGAGATGCGGAGTGGGCCTGGTCGGCAGGGCATGGAGGTaGCTGTCACTCTTTGCTGGC +
Preference number: 2 (lower is better)
Translates to: SILQGRAFLFLRCGVGLVGRAWR*LSLFAG
Trigger: GCCAGCAAAGAGTGACAGTCACCTCCATGCCCTGCC...GACCAGGCCCACTCCGCATCTCAAGAATAGGAAGGCACGGCCCTGCAATATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR-3UTR TCA 90 bp AAGGTTACAGGCAGCCAGAAGGGGAGTTGTGGGAGGCCAGTGACAAGGAGGAGGGGAACGCTGGCCTCCTaGATGCCCCTCAAGGTTACA +
Preference number: 2 (lower is better)
Translates to: KVTGSQKGSCGRPVTRRRGTLAS*MPLKVT
Trigger: TGTAACCTTGAGGGGCATTCAGGAGGCCAGCGTTCC...CCTCCTCCTTGTCACTGGCCTCCCACAACTCCCCTTCTGGCTGCCTGTAACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CCA 90 bp GTGCTTGGCCTGGGCTGGAACAGTAAGCGAGGCCACCCAGGTCCTTGTTCTCTACCAGAAGGGGAGTTGTaGGAGGCCAGTGACAAGGAG +
Preference number: 2 (lower is better)
Translates to: VLGLGWNSKRGHPGPCSLPEGEL*EASDKE
Trigger: CTCCTTGTCACTGGCCTCCCACAACTCCCCTTCTGG...TAGAGAACAAGGACCTGGGTGGCCTCGCTTACTGTTCCAGCCCAGGCCAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CCA 90 bp TTCTACCTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAAATGCAGTGTCCCTaGACACGTGCAGGGCTGCCA +
Preference number: 2 (lower is better)
Translates to: FYLYDDSRSEVGPPTWQSEMQCP*TRAGLP
Trigger: TGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTC...TGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAGGTAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR CAA 90 bp AAGCGGACCACAGACCTGTTGCCTGGCAGGGATCGAAAAAGGCTCTaGGGAAGTCGCACTCTGTCAGGGGGCTTGTCCTCGTCCTTCATC +
Preference number: 2 (lower is better)
Translates to: KRTTDLLPGRDRKRL*GSRTLSGGLSSSFI
Trigger: GATGAAGGACGAGGACAAGCCCCCTGACAGAGTGCGACTTCCCAAGAGCCTTTTTCGATCCCTGCCAGGCAACAGGTCTGTGGTCCGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568245.5
3UTR-3UTR GCA 90 bp CTTTCTACCTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTGTGACTGTCACTCTTTaGTGGCAGGGGGTCTCAGGA +
Preference number: 2 (lower is better)
Translates to: LSTSTMTAGQRSGHPRGSVTVTL*WQGVSG
Trigger: TCCTGAGACCCCCTGCCAGCAAAGAGTGACAGTCAC...ACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAGGTAGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CCA 90 bp ACGTGCAGGGCTGCCAGCACTCTGAACACGGGGGTCTCTTCCAGGAGGGTGGGCAGCTCACCCACTCAGTaGTTCTTTGAAATGCAGTGT +
Preference number: 2 (lower is better)
Translates to: TCRAASTLNTGVSSRRVGSSPTQ*FFEMQC
Trigger: ACACTGCATTTCAAAGAACCACTGAGTGGGTGAGCT...GCCCACCCTCCTGGAAGAGACCCCCGTGTTCAGAGTGCTGGCAGCCCTGCACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR TCA 90 bp AGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCCAGCACTCTACAGAGAGCCAGAGCTaGGTCCATATTGCAGGGCCG +
Preference number: 2 (lower is better)
Translates to: SGSLKCSVPGHVQGCQHSTESQS*VHIAGP
Trigger: CGGCCCTGCAATATGGACTCAGCTCTGGCTCTCTGT...AGAGTGCTGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR TCA 90 bp GGCCGTGCCTTCCTATTCTTGAGATGCGGAGTGGGCCTGGTCCAATCTTGCAGTACTCTCCTCCCTTGCTaGGACCAGAAGGTGAGTGAG +
Preference number: 2 (lower is better)
Translates to: GRAFLFLRCGVGLVQSCSTLLPC*DQKVSE
Trigger: CTCACTCACCTTCTGGTCTCAGCAAGGGAGGAGAGT...ACTGCAAGATTGGACCAGGCCCACTCCGCATCTCAAGAATAGGAAGGCACGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR-3UTR TCA 90 bp AACAAATATTTATTCAAGGTTTGCCACGAGCCAGACCCTGTGCTTGGCCTGGGCCAAACCCCCAGTGCCTaGGGGAACGCTGGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: NKYLFKVCHEPDPVLGLGQTPSA*GNAGLL
Trigger: CAGGAGGCCAGCGTTCCCTCAGGCACTGGGGGTTTG...GCCCAGGCCAAGCACAGGGTCTGGCTCGTGGCAAACCTTGAATAAATATTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR TCA 90 bp GGGGGTTTGCCCAAGGTAGCTCACCCACTCAGTGGTTCTTTGAAATGCAGTGTCAGAGGCCCAGCAGGGTaGGCACCTTCTTCCGGTTCT +
Preference number: 2 (lower is better)
Translates to: GGLPKVAHPLSGSLKCSVRGPAG*APSSGS
Trigger: AGAACCGGAAGAAGGTGCTCACCCTGCTGGGCCTCT...GACACTGCATTTCAAAGAACCACTGAGTGGGTGAGCTACCTTGGGCAAACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR-3UTR TCA 90 bp GACCACAGACCTGTTGCCTGGCAGGGATCGAAAAAGGCTCTTGGGAAGTCGCACCTGCAGTGTTGGTGCTaGGGTTCTGGACCAAAGCCT +
Preference number: 2 (lower is better)
Translates to: DHRPVAWQGSKKALGKSHLQCWC*GSGPKP
Trigger: AGGCTTTGGTCCAGAACCTCAGCACCAACACTGCAG...GTGCGACTTCCCAAGAGCCTTTTTCGATCCCTGCCAGGCAACAGGTCTGTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568245.5
3UTR-3UTR GCA 90 bp GGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACACACTTATTTATTCAAGGTTTaGCACGAGCCAGACCCTGTG +
Preference number: 2 (lower is better)
Translates to: GAQVLVAMPSLCSGAPHTYLFKV*HEPDPV
Trigger: CACAGGGTCTGGCTCGTGGCAAACCTTGAATAAATA...AGTGTGTGGGGCCCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CCA 90 bp TCCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGATGCGGAGTGGGCCTaGTCCAATCTTGCAGTAGAG +
Preference number: 2 (lower is better)
Translates to: SLFSRSSGPSGNAQPLLRDAEWA*SNLAVE
Trigger: CTCTACTGCAAGATTGGACCAGGCCCACTCCGCATC...CCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR-3UTR CCA 90 bp TCTGTCAGGGGGCTTGTCCTCGTCCTTCATCACCTGCCTCGGAACCTGAGAGGGAGTTTAGCCAGTATCTaGGCAGCACAAAGAGGAGCC +
Preference number: 2 (lower is better)
Translates to: SVRGLVLVLHHLPRNLRGSLASI*AAQRGA
Trigger: GGCTCCTCTTTGTGCTGCCCAGATACTGGCTAAACT...CCCTCTCAGGTTCCGAGGCAGGTGATGAAGGACGAGGACAAGCCCCCTGACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568245.5
3UTR CAA 90 bp GAGGGCTTTGCAATGAGGGCAGGGCATGGAGGTGACTGTCACTCTTaGCTGGCAGGGGGTCTCAGGACTATAGGAACTTTAGAGCCTTGC +
Preference number: 2 (lower is better)
Translates to: EGFAMRAGHGGDCHS*LAGGLRTIGTLEPC
Trigger: GCAAGGCTCTAAAGTTCCTATAGTCCTGAGACCCCCTGCCAGCAAAGAGTGACAGTCACCTCCATGCCCTGCCCTCATTGCAAAGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR CAA 90 bp AGAGCCAGAGCTGAGTCCATATTGCAGGGCCGTGCCTTCCTATTCTaGAGATGCGGAGTGGGCCTGGTCCAATCTTGCAGTAGAGGAGGA +
Preference number: 2 (lower is better)
Translates to: RARAESILQGRAFLF*RCGVGLVQSCSRGG
Trigger: TCCTCCTCTACTGCAAGATTGGACCAGGCCCACTCCGCATCTCAAGAATAGGAAGGCACGGCCCTGCAATATGGACTCAGCTCTGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR-3UTR TCA 90 bp TGGATCTGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCTACAGAGAAGGAAACTaGGGGAGTACAGAGAGAGGC +
Preference number: 2 (lower is better)
Translates to: WIWMGPLMPRGPTWSHPLYREGN*GSTERG
Trigger: GCCTCTCTCTGTACTCCCTCAGTTTCCTTCTCTGTA...GAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCAGATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
3UTR-3UTR TCA 90 bp AGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCCAGCACTCTACTCTCCTCCCTTGCTaGGACCAGAAGGTGAGTGAG +
Preference number: 2 (lower is better)
Translates to: SGSLKCSVPGHVQGCQHSTLLPC*DQKVSE
Trigger: CTCACTCACCTTCTGGTCTCAGCAAGGGAGGAGAGT...AGAGTGCTGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR TCA 90 bp GTGCTTGGCCTGGGCTGGAACAGTAAGCGAGGCCACCCAGGTCCTTGTTCTCTACACTCAGTGGTTCTTTaGAATGCAGTGTCCCTGGAC +
Preference number: 2 (lower is better)
Translates to: VLGLGWNSKRGHPGPCSLHSVVL*NAVSLD
Trigger: GTCCAGGGACACTGCATTTCAAAGAACCACTGAGTG...TAGAGAACAAGGACCTGGGTGGCCTCGCTTACTGTTCCAGCCCAGGCCAAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR TCA 90 bp CAATCTTGCAGTAGAGGAGGAGACTGTGGTGCTCTGACTTGGGAGGTAAAGGATAGAGGCCCAACGGGGTaGAGATGGCCAACCCCCATG +
Preference number: 2 (lower is better)
Translates to: QSCSRGGDCGALTWEVKDRGPTG*RWPTPM
Trigger: CATGGGGGTTGGCCATCTTCACCCCGTTGGGCCTCT...ATCCTTTACCTCCCAAGTCAGAGCACCACAGTCTCCTCCTCTACTGCAAGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR-3UTR GCA 90 bp CTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAGTCAAGTGGTTCTTTGAAATaGAGTGTCCCTGGACACGTG +
Preference number: 2 (lower is better)
Translates to: LYDDSRSEVGPPTWQSESSGSLK*SVPGHV
Trigger: CACGTGTCCAGGGACACTGCATTTCAAAGAACCACT...TGACTCTGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CCA 90 bp GCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGATGCCAAGGGTGGGCTCTGATTaGATGGGCAGAGACCAGGGG +
Preference number: 2 (lower is better)
Translates to: AYVDSWTYSWIWMGPLMPRVGSD*MGRDQG
Trigger: CCCCTGGTCTCTGCCCATCCAATCAGAGCCCACCCT...TGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR TCA 90 bp GGGGGTTTGCCCAAGGTAGCTCACCCACTCAGTGGTTCTTTGAAATGCAGTGTCAGTAGCCGTGGACGGTaGTATAGAGGGCGTACATGG +
Preference number: 2 (lower is better)
Translates to: GGLPKVAHPLSGSLKCSVSSRGR*YRGRTW
Trigger: CCATGTACGCCCTCTATATCACCGTCCACGGCTACT...GACACTGCATTTCAAAGAACCACTGAGTGGGTGAGCTACCTTGGGCAAACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR-3UTR TCA 90 bp TGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACACACTGAATGAGTGGGAGCACCACCTTGCAAGGAGTTaGAAAGTGCAAAGATGTAGA +
Preference number: 2 (lower is better)
Translates to: WQCPASAQGPHTLNEWEHHLARS*KVQRCR
Trigger: TCTACATCTTTGCACTTTTCAACTCCTTGCAAGGTG...GTGCTCCCACTCATTCAGTGTGTGGGGCCCCTGAGCAGAGGCTGGGCATTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR-3UTR GCA 90 bp TCCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGAGAGCCTTGCAAACCTaGTTACGTGGACTCTTGGAC +
Preference number: 2 (lower is better)
Translates to: SLFSRSSGPSGNAQPLLRRALQT*LRGLLD
Trigger: GTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCT...CCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR GCA 90 bp GGGGGTTTGCCCAAGGTAGCTCACCCACTCAGTGGTTCTTTGAAATGCAGTGTCAAAACAAACCCCCAGTaGCTGAGGGAACGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: GGLPKVAHPLSGSLKCSVKTNPQ*LRERWP
Trigger: AGGCCAGCGTTCCCTCAGGCACTGGGGGTTTGTTTT...GACACTGCATTTCAAAGAACCACTGAGTGGGTGAGCTACCTTGGGCAAACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CCA 90 bp AACAAATATTTATTCAAGGTTTGCCACGAGCCAGACCCTGTGCTTGGCCTGGGCTGCCTGAGGGAACGCTaGCCTCCTGAATGCCCCTCA +
Preference number: 2 (lower is better)
Translates to: NKYLFKVCHEPDPVLGLGCLRER*PPECPS
Trigger: TGAGGGGCATTCAGGAGGCCAGCGTTCCCTCAGGCA...GCCCAGGCCAAGCACAGGGTCTGGCTCGTGGCAAACCTTGAATAAATATTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR TCA 90 bp AAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGACAGAGAGCCAGAGCTaGGTCCATATTGCAGGGCCG +
Preference number: 2 (lower is better)
Translates to: KPAYVDSWTYSWIWMGPLTESQS*VHIAGP
Trigger: CGGCCCTGCAATATGGACTCAGCTCTGGCTCTCTGT...CAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
3UTR-3UTR TCA 90 bp GGGGGTTTGCCCAAGGTAGCTCACCCACTCAGTGGTTCTTTGAAATGCAGTGTCTTTCTACCTCTACGATaGCAGCAGGTCAGAGGTCGG +
Preference number: 2 (lower is better)
Translates to: GGLPKVAHPLSGSLKCSVFLPLR*QQVRGR
Trigger: CCGACCTCTGACCTGCTGTCATCGTAGAGGTAGAAA...GACACTGCATTTCAAAGAACCACTGAGTGGGTGAGCTACCTTGGGCAAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR GCA 90 bp CAGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCCAGCACTCGGAACTTTAGAGCCTTaGAAACCTGCTTACGTGGAC +
Preference number: 2 (lower is better)
Translates to: QWFFEMQCPWTRAGLPALGTLEP*KPAYVD
Trigger: GTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCC...GAGTGCTGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR GCA 90 bp AACAAATATTTATTCAAGGTTTGCCACGAGCCAGACCCTGTGCTTGGCCTGGGCCGCTGGCCTCCTGAATaGCCCTCAAGGTTACAGGCA +
Preference number: 2 (lower is better)
Translates to: NKYLFKVCHEPDPVLGLGRWPPE*PSRLQA
Trigger: TGCCTGTAACCTTGAGGGGCATTCAGGAGGCCAGCG...GCCCAGGCCAAGCACAGGGTCTGGCTCGTGGCAAACCTTGAATAAATATTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR GCA 90 bp GGGGGTTTGCCCAAGGTAGCTCACCCACTCAGTGGTTCTTTGAAATGCAGTGTCGGCCTGGTCCAATCTTaGAGTAGAGGAGGAGACTGT +
Preference number: 2 (lower is better)
Translates to: GGLPKVAHPLSGSLKCSVGLVQS*SRGGDC
Trigger: ACAGTCTCCTCCTCTACTGCAAGATTGGACCAGGCC...GACACTGCATTTCAAAGAACCACTGAGTGGGTGAGCTACCTTGGGCAAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR-3UTR CCA 90 bp TCCTTCCAGGGCTATGCCAGCAACAGACTCTCCTCCCTTGCTGAGACCAGAAGGGCTTACGTGGACTCTTaGACCTATAGTTGGATCTGG +
Preference number: 2 (lower is better)
Translates to: SFQGYASNRLSSLAETRRAYVDS*TYSWIW
Trigger: CCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC...CCTTCTGGTCTCAGCAAGGGAGGAGAGTCTGTTGCTGGCATAGCCCTGGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CCA 90 bp CCTCGGAACCTGAGAGGGCTCCAGAGAGAAATAGAAGTCTTCTGCAGTGTTGGTGCCTCTGAACAGCTCTaGGGTGCTAAGAAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: PRNLRGLQREIEVFCSVGASEQL*GAKKLL
Trigger: CAGGAGCTTCTTAGCACCCCAGAGCTGTTCAGAGGC...ACCAACACTGCAGAAGACTTCTATTTCTCTCTGGAGCCCTCTCAGGTTCCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568245.5
3UTR-3UTR TCA 90 bp GGGGGTTTGCCCAAGGTAGCTCACCCACTCAGTGGTTCTTTGAAATGCAGTGTCTACAGAGAAGGAAACTaGGGGAGTACAGAGAGAGGC +
Preference number: 2 (lower is better)
Translates to: GGLPKVAHPLSGSLKCSVYREGN*GSTERG
Trigger: GCCTCTCTCTGTACTCCCTCAGTTTCCTTCTCTGTA...GACACTGCATTTCAAAGAACCACTGAGTGGGTGAGCTACCTTGGGCAAACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CCA 90 bp AGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCCAGCACTCTGCAAACCTGCTTACGTaGACTCTTGGACCTATAGTT +
Preference number: 2 (lower is better)
Translates to: SGSLKCSVPGHVQGCQHSANLLT*TLGPIV
Trigger: AACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGC...AGAGTGCTGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CCA 90 bp AACAAATATTTATTCAAGGTTTGCCACGAGCCAGACCCTGTGCTTGGCCTGGGCACTGTCACTCTTTGCTaGCAGGGGGTCTCAGGACTA +
Preference number: 2 (lower is better)
Translates to: NKYLFKVCHEPDPVLGLGTVTLC*QGVSGL
Trigger: TAGTCCTGAGACCCCCTGCCAGCAAAGAGTGACAGT...GCCCAGGCCAAGCACAGGGTCTGGCTCGTGGCAAACCTTGAATAAATATTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CCA 90 bp GGAGCACCCCCAGGTGTGCTGAGCCCCAGATTGTTTGCTTTCTACCTCTACGATAGCTCACCCACTCAGTaGTTCTTTGAAATGCAGTGT +
Preference number: 2 (lower is better)
Translates to: GAPPGVLSPRLFAFYLYDSSPTQ*FFEMQC
Trigger: ACACTGCATTTCAAAGAACCACTGAGTGGGTGAGCT...ATCGTAGAGGTAGAAAGCAAACAATCTGGGGCTCAGCACACCTGGGGGTGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR GCA 90 bp AGACCTGTTGCCTGGCAGGGATCGAAAAAGGCTCTTGGGAAGTCGCACTCTGTCGAAATAGAAGTCTTCTaGAGTGTTGGTGCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: RPVAWQGSKKALGKSHSVEIEVF*SVGAEV
Trigger: AACCTCAGCACCAACACTGCAGAAGACTTCTATTTC...GACAGAGTGCGACTTCCCAAGAGCCTTTTTCGATCCCTGCCAGGCAACAGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568245.5
3UTR TCA 72 bp CAGTGTCCCTGGACACGTGCAGGGCTGCCAGCACTCTaGACACGGGGGTCTCTTCCAGGAGGGTGGGCTCTG +
Preference number: 3 (lower is better)
Translates to: QCPWTRAGLPAL*TRGSLPGGWAL
Trigger: CAGAGCCCACCCTCCTGGAAGAGACCCCCGTGTTCAGAGTGCTGGCAGCCCTGCACGTGTCCAGGGACACTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CAA 90 bp CTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAGTCAAGCCAGACCCTGTGCTaGGCCTGGGCTGGAACAGTA +
Preference number: 3 (lower is better)
Translates to: LYDDSRSEVGPPTWQSESSQTLC*AWAGTV
Trigger: TACTGTTCCAGCCCAGGCCAAGCACAGGGTCTGGCT...TGACTCTGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR TCA 72 bp AACAAACCCCCAGTGCCTGAGGGAACGCTGGCCTCCTaGATGCCCCTCAAGGTTACAGGCAGCCAGAAGGGG +
Preference number: 3 (lower is better)
Translates to: NKPPVPEGTLAS*MPLKVTGSQKG
Trigger: CCCCTTCTGGCTGCCTGTAACCTTGAGGGGCATTCAGGAGGCCAGCGTTCCCTCAGGCACTGGGGGTTTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR TCA 72 bp GTGCAAAGATGTAGACGGTGGAGAGGCCCAACGGGGTaGAGATGGCCAACCCCCATGTCACACCCACCAGGC +
Preference number: 3 (lower is better)
Translates to: VQRCRRWRGPTG*RWPTPMSHPPG
Trigger: GCCTGGTGGGTGTGACATGGGGGTTGGCCATCTTCACCCCGTTGGGCCTCTCCACCGTCTACATCTTTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR GCA 72 bp AACCCCCAGTGCCTGAGGGAACGCTGGCCTCCTGAATaGCCCTCAAGGTTACAGGCAGCCAGAAGGGGAGTT +
Preference number: 3 (lower is better)
Translates to: NPQCLRERWPPE*PSRLQAARRGV
Trigger: AACTCCCCTTCTGGCTGCCTGTAACCTTGAGGGGCATTCAGGAGGCCAGCGTTCCCTCAGGCACTGGGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR CCA 72 bp GTTTGCCACGAGCCAGACCCTGTGCTTGGCCTGGGCTaGAACAGTAAGCGAGGCCACCCAGGTCCTTGTTCT +
Preference number: 3 (lower is better)
Translates to: VCHEPDPVLGLG*NSKRGHPGPCS
Trigger: AGAACAAGGACCTGGGTGGCCTCGCTTACTGTTCCAGCCCAGGCCAAGCACAGGGTCTGGCTCGTGGCAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR CCA 72 bp TCAAGGTTTGCCACGAGCCAGACCCTGTGCTTGGCCTaGGCTGGAACAGTAAGCGAGGCCACCCAGGTCCTT +
Preference number: 3 (lower is better)
Translates to: SRFATSQTLCLA*AGTVSEATQVL
Trigger: AAGGACCTGGGTGGCCTCGCTTACTGTTCCAGCCCAGGCCAAGCACAGGGTCTGGCTCGTGGCAAACCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CAA 90 bp CCCAGGTCCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGGGTGACTGTCACTCTTaGCTGGCAGGGGGTCTCAGG +
Preference number: 3 (lower is better)
Translates to: PRSLFSRSSGPSGNAQPLGDCHS*LAGGLR
Trigger: CCTGAGACCCCCTGCCAGCAAAGAGTGACAGTCACC...CAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGGACCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CAA 90 bp AAGGTTACAGGCAGCCAGAAGGGGAGTTGTGGGAGGCCAGTGACAAGGAGGAGGAGAGGGCGTACATGGTaGTCCCTTCACGGAACCAGC +
Preference number: 3 (lower is better)
Translates to: KVTGSQKGSCGRPVTRRRRGRTW*SLHGTS
Trigger: GCTGGTTCCGTGAAGGGACAACCATGTACGCCCTCT...CCTCCTCCTTGTCACTGGCCTCCCACAACTCCCCTTCTGGCTGCCTGTAACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR-3UTR CAA 90 bp GGAGCACCCCCAGGTGTGCTGAGCCCCAGATTGTTTGCTTTCTACCTCTACGATTTCTTCCCCCGCTCCTaGACCGCTGTAGCACGGGAC +
Preference number: 3 (lower is better)
Translates to: GAPPGVLSPRLFAFYLYDFFPRS*TAVARD
Trigger: GTCCCGTGCTACAGCGGTCAAGGAGCGGGGGAAGAA...ATCGTAGAGGTAGAAAGCAAACAATCTGGGGCTCAGCACACCTGGGGGTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR-3UTR CAA 90 bp CCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGACAGACTCTCCTCCCTaGCTGAGACCAGAAGGTGAG +
Preference number: 3 (lower is better)
Translates to: PCSLGAQVLVAMPSLCSGTDSPP*LRPEGE
Trigger: CTCACCTTCTGGTCTCAGCAAGGGAGGAGAGTCTGT...CCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR TCA 72 bp GCTGAGCCCCAGATTGTTTGCTTTCTACCTCTACGATaGCAGCAGGTCAGAGGTCGGGCCACCCACGTGGCA +
Preference number: 3 (lower is better)
Translates to: AEPQIVCFLPLR*QQVRGRATHVA
Trigger: TGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAGGTAGAAAGCAAACAATCTGGGGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR GCA 72 bp TCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTaGCAGCACTCTGAACACGGGGGTCTCTTCCAGGAG +
Preference number: 3 (lower is better)
Translates to: SLKCSVPGHVQG*QHSEHGGLFQE
Trigger: CTCCTGGAAGAGACCCCCGTGTTCAGAGTGCTGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR TCA 72 bp TCTCCCTCCCCAGCCACATTGTACAGAGAAGGAAACTaGGGGAGTACAGAGAGAGGCACGGAGCTGCCCAAG +
Preference number: 3 (lower is better)
Translates to: SPSPATLYREGN*GSTERGTELPK
Trigger: CTTGGGCAGCTCCGTGCCTCTCTCTGTACTCCCTCAGTTTCCTTCTCTGTACAATGTGGCTGGGGAGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
3UTR TCA 72 bp CCAGGGCTATGCCAGCAACAGACTCTCCTCCCTTGCTaGGACCAGAAGGTGAGTGAGGGCTTTGCAATGAGG +
Preference number: 3 (lower is better)
Translates to: PGLCQQQTLLPC*DQKVSEGFAMR
Trigger: CCTCATTGCAAAGCCCTCACTCACCTTCTGGTCTCAGCAAGGGAGGAGAGTCTGTTGCTGGCATAGCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR-3UTR CAA 90 bp GCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGATGCCAGGTGACTGTCACTCTTaGCTGGCAGGGGGTCTCAGG +
Preference number: 3 (lower is better)
Translates to: AYVDSWTYSWIWMGPLMPGDCHS*LAGGLR
Trigger: CCTGAGACCCCCTGCCAGCAAAGAGTGACAGTCACC...TGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR CCA 72 bp CCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTaGATGGGACCTCTGATGCCACGTGGTCCAACCTGG +
Preference number: 3 (lower is better)
Translates to: PAYVDSWTYSWI*MGPLMPRGPTW
Trigger: CCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
3UTR-3UTR CAA 90 bp TTCTACCTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGCAGATGAAGACACCTaGCAAGGAGTTGAAAAGTGC +
Preference number: 3 (lower is better)
Translates to: FYLYDDSRSEVGPPTWQSADEDT*QGVEKC
Trigger: GCACTTTTCAACTCCTTGCAAGGTGTCTTCATCTGC...TGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAGGTAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR GCA 72 bp CTATTCTTGAGATGCGGAGTGGGCCTGGTCCAATCTTaGAGTAGAGGAGGAGACTGTGGTGCTCTGACTTGG +
Preference number: 3 (lower is better)
Translates to: LFLRCGVGLVQS*SRGGDCGALTW
Trigger: CCAAGTCAGAGCACCACAGTCTCCTCCTCTACTGCAAGATTGGACCAGGCCCACTCCGCATCTCAAGAATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR GCA 72 bp TCCATATTGCAGGGCCGTGCCTTCCTATTCTTGAGATaGGGAGTGGGCCTGGTCCAATCTTGCAGTAGAGGA +
Preference number: 3 (lower is better)
Translates to: SILQGRAFLFLR*GVGLVQSCSRG
Trigger: TCCTCTACTGCAAGATTGGACCAGGCCCACTCCGCATCTCAAGAATAGGAAGGCACGGCCCTGCAATATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR-3UTR CAA 90 bp TCCTTCCAGGGCTATGCCAGCAACAGACTCTCCTCCCTTGCTGAGACCAGAAGGAGGAACTTTAGAGCCTaGCAAACCTGCTTACGTGGA +
Preference number: 3 (lower is better)
Translates to: SFQGYASNRLSSLAETRRRNFRA*QTCLRG
Trigger: TCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCT...CCTTCTGGTCTCAGCAAGGGAGGAGAGTCTGTTGCTGGCATAGCCCTGGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR CCA 72 bp TGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTaGATCTGGATGGGACCTCTGATGCCACGTGGTCCA +
Preference number: 3 (lower is better)
Translates to: CKPAYVDSWTYS*IWMGPLMPRGP
Trigger: TGGACCACGTGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
3UTR-3UTR CAA 90 bp GGGGGTTTGCCCAAGGTAGCTCACCCACTCAGTGGTTCTTTGAAATGCAGTGTCGTGCTGAGCCCCAGATaGTTTGCTTTCTACCTCTAC +
Preference number: 3 (lower is better)
Translates to: GGLPKVAHPLSGSLKCSVVLSPR*FAFYLY
Trigger: GTAGAGGTAGAAAGCAAACAATCTGGGGCTCAGCAC...GACACTGCATTTCAAAGAACCACTGAGTGGGTGAGCTACCTTGGGCAAACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR CCA 72 bp TCTTGCAGTAGAGGAGGAGACTGTGGTGCTCTGACTTaGGAGGTAAAGGATGGTGAACCAGCAGCAGATGAA +
Preference number: 3 (lower is better)
Translates to: SCSRGGDCGALT*EVKDGEPAADE
Trigger: TTCATCTGCTGCTGGTTCACCATCCTTTACCTCCCAAGTCAGAGCACCACAGTCTCCTCCTCTACTGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR GCA 72 bp GCAGGGGGTCTCAGGACTATAGGAACTTTAGAGCCTTaGAAACCTGCTTACGTGGACTCTTGGACCTATAGT +
Preference number: 3 (lower is better)
Translates to: AGGLRTIGTLEP*KPAYVDSWTYS
Trigger: ACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCTATAGTCCTGAGACCCCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR CCA 72 bp ACTTTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTaGACCTATAGTTGGATCTGGATGGGACCTCTGATG +
Preference number: 3 (lower is better)
Translates to: TLEPCKPAYVDS*TYSWIWMGPLM
Trigger: CATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp GGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGCCCACTCCCAGTGCCGATaGCCATCAGGGCGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GTSDATWSNLVPSSPSPAHSQCR*PSGRAG
Trigger: GCCTGCCCGCCCTGATGGTCATCGGCACTGGGAGTG...GGCTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp AGGCCCAACGGGGTGAAGATGGCCAACCCCCATGTCACACCCACCAGGCTCGAGCGAGCCGGGGGCCCTTaGAGAGAGTCCCTGGACCAA +
Preference number: 4 (lower is better)
Translates to: RPNGVKMANPHVTPTRLERAGGP*RESLDQ
Trigger: TTGGTCCAGGGACTCTCTTCAAGGGCCCCCGGCTCG...CTCGAGCCTGGTGGGTGTGACATGGGGGTTGGCCATCTTCACCCCGTTGGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR TCA 90 bp TCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACGGTCCCCTCAGGTCTaGCCTCCGTGGAGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SLGAQVLVAMPSLCSGAPRSPQV*PPWSSP
Trigger: AGGGCTGCTCCACGGAGGTCAGACCTGAGGGGACCG...TGGGGCCCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp ACGTGCAGGGCTGCCAGCACTCTGAACACGGGGGTCTCTTCCAGGAGGGTGGGCCAGGGGCAGACTGGGTaGGAGGATCAACTCCCACCC +
Preference number: 4 (lower is better)
Translates to: TCRAASTLNTGVSSRRVGQGQTG*EDQLPP
Trigger: GGGTGGGAGTTGATCCTCCCACCCAGTCTGCCCCTG...GCCCACCCTCCTGGAAGAGACCCCCGTGTTCAGAGTGCTGGCAGCCCTGCACGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp GGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGCCGTCGGGCCACCCACGTaGCAGTCAGAGTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: GTSDATWSNLVPSSPSPAVGPPT*QSESGV
Trigger: CACTCCTGACTCTGACTGCCACGTGGGTGGCCCGAC...GGCTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp TGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCGAGCCGGGGGCCCTTaGAGAGAGTCCCTGGACCAA +
Preference number: 4 (lower is better)
Translates to: WMGPLMPRGPTWSHPLPPRAGGP*RESLDQ
Trigger: TTGGTCCAGGGACTCTCTTCAAGGGCCCCCGGCTCG...GGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp TGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACACACTGAATGAGTGGGAGCACCAAACCCCCAGTGCCTaGGGGAACGCTGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: WQCPASAQGPHTLNEWEHQTPSA*GNAGLL
Trigger: CAGGAGGCCAGCGTTCCCTCAGGCACTGGGGGTTTG...GTGCTCCCACTCATTCAGTGTGTGGGGCCCCTGAGCAGAGGCTGGGCATTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp GGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGCCATCCTTGGCCAGCCTTaGCCACGCCAGGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GTSDATWSNLVPSSPSPAILGQP*PRQELC
Trigger: ACAGAGCTCCTGGCGTGGGCAAGGCTGGCCAAGGAT...GGCTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS-3UTR GCA 90 bp GGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACACACTGGACACGTGCAGGGCTaGCAGCACTCTGAACACGGG +
Preference number: 4 (lower is better)
Translates to: GAQVLVAMPSLCSGAPHTGHVQG*QHSEHG
Trigger: CCCGTGTTCAGAGTGCTGGCAGCCCTGCACGTGTCC...AGTGTGTGGGGCCCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp GACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAGTCAGGAGTGGGGACCCCACAGCCCGCCTaGGAGATGCGTGTGAGGATA +
Preference number: 4 (lower is better)
Translates to: DSRSEVGPPTWQSESGVGTPQPA*EMRVRI
Trigger: TATCCTCACACGCATCTCCCAGGCGGGCTGTGGGGT...CCCCACTCCTGACTCTGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp GGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGCCACCCCACAGCCCGCCTaGGAGATGCGTGTGAGGATA +
Preference number: 4 (lower is better)
Translates to: GTSDATWSNLVPSSPSPATPQPA*EMRVRI
Trigger: TATCCTCACACGCATCTCCCAGGCGGGCTGTGGGGT...GGCTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp TGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCGGGCTTTTCCTGACCTaGGGTCGGGAGCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: WMGPLMPRGPTWSHPLPPGLFLT*GREQEE
Trigger: CTCCTCCTGCTCCCGACCTCAGGTCAGGAAAAGCCC...GGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp GACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAGTCAGGAGTGGGGCAATGTCCAGAATGGTaGCGGCCAAGCGGACCACAG +
Preference number: 4 (lower is better)
Translates to: DSRSEVGPPTWQSESGVGQCPEW*RPSGPQ
Trigger: CTGTGGTCCGCTTGGCCGTCACCATTCTGGACATTG...CCCCACTCCTGACTCTGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp ATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGGGGGGCGGTCGCTGGTaGGAGAAGACGATCTCCAGA +
Preference number: 4 (lower is better)
Translates to: MGPLMPRGPTWSHPLPPQGGGRW*EKTISR
Trigger: TCTGGAGATCGTCTTCTCTCACCAGCGACCGCCCCC...CTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCAT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp ACGTGCAGGGCTGCCAGCACTCTGAACACGGGGGTCTCTTCCAGGAGGGTGGGCCACCCCCAGGTGTGCTaGGCCCCAGATTGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: TCRAASTLNTGVSSRRVGHPQVC*APDCLL
Trigger: AAGCAAACAATCTGGGGCTCAGCACACCTGGGGGTG...GCCCACCCTCCTGGAAGAGACCCCCGTGTTCAGAGTGCTGGCAGCCCTGCACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp ATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGGCAATGCCCAGCCTCTaGTCAGGGGCCCCACACACT +
Preference number: 4 (lower is better)
Translates to: MGPLMPRGPTWSHPLPPQAMPSL*SGAPHT
Trigger: AGTGTGTGGGGCCCCTGAGCAGAGGCTGGGCATTGC...CTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp TCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGCCCCAGCAATGCCCAGCCTCTaGTCAGGGGCCCCACACACT +
Preference number: 4 (lower is better)
Translates to: SLGAQVLVAMPSLCSGAPAMPSL*SGAPHT
Trigger: AGTGTGTGGGGCCCCTGAGCAGAGGCTGGGCATTGC...TGGGGCCCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp ACGGCCAAGCGGACCACAGACCTGTTGCCTGGCAGGGATCGAAAAAGGCTCTTGGGGCGTCGCCATCCTTaGCCAGCCTTGCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: TAKRTTDLLPGRDRKRLLGRRHP*PALPTP
Trigger: TGGCGTGGGCAAGGCTGGCCAAGGATGGCGACGCCC...CAAGAGCCTTTTTCGATCCCTGCCAGGCAACAGGTCTGTGGTCCGCTTGGCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR CCA 90 bp GGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACACACTACCCCACAGCCCGCCTaGGAGATGCGTGTGAGGATA +
Preference number: 4 (lower is better)
Translates to: GAQVLVAMPSLCSGAPHTTPQPA*EMRVRI
Trigger: TATCCTCACACGCATCTCCCAGGCGGGCTGTGGGGT...AGTGTGTGGGGCCCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp GACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAGTCAGGAGTGGGGCCACCCAGGGCCACGTaGATCTTTGGGGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: DSRSEVGPPTWQSESGVGPPRAT*IFGASS
Trigger: AGAAGATGCCCCAAAGATCCACGTGGCCCTGGGTGG...CCCCACTCCTGACTCTGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333493.9
CDS-3UTR CCA 90 bp GGTGAAGATGGCCAACCCCCATGTCACACCCACCAGGCTCGAGAGGCCCAGCAGTGCCTGAGGGAACGCTaGCCTCCTGAATGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: GEDGQPPCHTHQAREAQQCLRER*PPECPS
Trigger: TGAGGGGCATTCAGGAGGCCAGCGTTCCCTCAGGCA...CTGCTGGGCCTCTCGAGCCTGGTGGGTGTGACATGGGGGTTGGCCATCTTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR TCA 90 bp GGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGCCGCTCAGCCAGCTTGGTaGCATGCATTTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: GTSDATWSNLVPSSPSPAAQPAW*HAFVPH
Trigger: GTGTGGGACAAATGCATGTCACCAAGCTGGCTGAGC...GGCTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp CAGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCCAGCACTCCGGTCCCCTCAGGTCTaGCCTCCGTGGAGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: QWFFEMQCPWTRAGLPALRSPQV*PPWSSP
Trigger: AGGGCTGCTCCACGGAGGTCAGACCTGAGGGGACCG...GAGTGCTGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp TGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACACACTGAATGAGTGGGAGCACGGCAGGGCATGGAGGTaGCTGTCACTCTTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: WQCPASAQGPHTLNEWEHGRAWR*LSLFAG
Trigger: GCCAGCAAAGAGTGACAGTCACCTCCATGCCCTGCC...GTGCTCCCACTCATTCAGTGTGTGGGGCCCCTGAGCAGAGGCTGGGCATTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp TGGATCTGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCAGGGGCCCCACACACTaGATGAGTGGGAGCACCCCC +
Preference number: 4 (lower is better)
Translates to: WIWMGPLMPRGPTWSHPLRGPTH*MSGSTP
Trigger: GGGGGTGCTCCCACTCATTCAGTGTGTGGGGCCCCT...GAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCAGATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp TTCTACCTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAAGGGGCCCCACACACTaGATGAGTGGGAGCACCCCC +
Preference number: 4 (lower is better)
Translates to: FYLYDDSRSEVGPPTWQSRGPTH*MSGSTP
Trigger: GGGGGTGCTCCCACTCATTCAGTGTGTGGGGCCCCT...TGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAGGTAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp CTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAGTCAGTGTCCCTGGACACGTaGAGGGCTGCCAGCACTCTG +
Preference number: 4 (lower is better)
Translates to: LYDDSRSEVGPPTWQSESVSLDT*RAASTL
Trigger: CAGAGTGCTGGCAGCCCTGCACGTGTCCAGGGACAC...TGACTCTGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp GACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAGTCAGGAGTGGGGTTCTTGGCCCTTCGGTaGGCTTTTCCTGACCTGAGG +
Preference number: 4 (lower is better)
Translates to: DSRSEVGPPTWQSESGVGFLALR*AFPDLR
Trigger: CCTCAGGTCAGGAAAAGCCCACCGAAGGGCCAAGAA...CCCCACTCCTGACTCTGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp ATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGTGGACTGGTCCAAGGTaGGTCTCAGGAGCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: MGPLMPRGPTWSHPLPPQWTGPR*VSGAGR
Trigger: TCGCCCTGCTCCTGAGACCCACCTTGGACCAGTCCA...CTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp GGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGCCATATGCACCGTGGACTaGTCCAAGGTGGGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GTSDATWSNLVPSSPSPAICTVD*SKVGLR
Trigger: CCTGAGACCCACCTTGGACCAGTCCACGGTGCATAT...GGCTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp ATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGCAATGTCCAGAATGGTaGCGGCCAAGCGGACCACAG +
Preference number: 4 (lower is better)
Translates to: MGPLMPRGPTWSHPLPPQQCPEW*RPSGPQ
Trigger: CTGTGGTCCGCTTGGCCGTCACCATTCTGGACATTG...CTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp ATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGCCTGGGAGATGCGTGTaGGGATATGCACCGTGGACT +
Preference number: 4 (lower is better)
Translates to: MGPLMPRGPTWSHPLPPQPGRCV*GYAPWT
Trigger: AGTCCACGGTGCATATCCTCACACGCATCTCCCAGG...CTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp TGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCACAGAGAGCCAGAGCTaGGTCCATATTGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: WMGPLMPRGPTWSHPLPPTESQS*VHIAGP
Trigger: CGGCCCTGCAATATGGACTCAGCTCTGGCTCTCTGT...GGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp TCCTTCCAGGGCTATGCCAGCAACAGACTCTCCTCCCTTGCTGAGACCAGAAGGCAAACCCCCAGTGCCTaGGGGAACGCTGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SFQGYASNRLSSLAETRRQTPSA*GNAGLL
Trigger: CAGGAGGCCAGCGTTCCCTCAGGCACTGGGGGTTTG...CCTTCTGGTCTCAGCAAGGGAGGAGAGTCTGTTGCTGGCATAGCCCTGGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp CCTGAATGCCCCTCAAGGTTACAGGCAGCCAGAAGGGGAGTTGTGGGAGGCCAGCAGGAGGGTGGGCTCTaGTTGGATGGGCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: PECPSRLQAARRGVVGGQQEGGL*LDGQRP
Trigger: TGGTCTCTGCCCATCCAATCAGAGCCCACCCTCCTG...CTGGCCTCCCACAACTCCCCTTCTGGCTGCCTGTAACCTTGAGGGGCATTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp GTGCTTGGCCTGGGCTGGAACAGTAAGCGAGGCCACCCAGGTCCTTGTTCTCTAGGGCTGCCAGCACTCTaGACACGGGGGTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VLGLGWNSKRGHPGPCSLGLPAL*TRGSLP
Trigger: TGGAAGAGACCCCCGTGTTCAGAGTGCTGGCAGCCC...TAGAGAACAAGGACCTGGGTGGCCTCGCTTACTGTTCCAGCCCAGGCCAAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp CTTTCTACCTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTGGGCTGCCAGCACTCTaGACACGGGGGTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LSTSTMTAGQRSGHPRGSGLPAL*TRGSLP
Trigger: TGGAAGAGACCCCCGTGTTCAGAGTGCTGGCAGCCC...ACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAGGTAGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp CCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACACACTGAATaGGTGGGAGCACCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PCSLGAQVLVAMPSLCSGAPHTE*VGAPPG
Trigger: ACCTGGGGGTGCTCCCACTCATTCAGTGTGTGGGGC...CCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp TCTGTCAGGGGGCTTGTCCTCGTCCTTCATCACCTGCCTCGGAACCTGAGAGGGGAGTCGCTGCCCGACTaGCTGCACTTGGTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: SVRGLVLVLHHLPRNLRGESLPD*LHLVKH
Trigger: GTGCTTCACCAAGTGCAGGCAGTCGGGCAGCGACTC...CCCTCTCAGGTTCCGAGGCAGGTGATGAAGGACGAGGACAAGCCCCCTGACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR GCA 90 bp GGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGCCGCAAGTTTTCCACATTaGAGGAGTCGCTGCCCGACT +
Preference number: 4 (lower is better)
Translates to: GTSDATWSNLVPSSPSPAASFPH*RSRCPT
Trigger: AGTCGGGCAGCGACTCCTGCAATGTGGAAAACTTGC...GGCTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp GGTGAAGATGGCCAACCCCCATGTCACACCCACCAGGCTCGAGAGGCCCAGCAGGTGACTGTCACTCTTTaGTGGCAGGGGGTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GEDGQPPCHTHQAREAQQVTVTL*WQGVSG
Trigger: TCCTGAGACCCCCTGCCAGCAAAGAGTGACAGTCAC...CTGCTGGGCCTCTCGAGCCTGGTGGGTGTGACATGGGGGTTGGCCATCTTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR GCA 90 bp TGGATCTGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCGGACACGTGCAGGGCTaGCAGCACTCTGAACACGGG +
Preference number: 4 (lower is better)
Translates to: WIWMGPLMPRGPTWSHPLGHVQG*QHSEHG
Trigger: CCCGTGTTCAGAGTGCTGGCAGCCCTGCACGTGTCC...GAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCAGATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp CCCAGGTCCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGGTGTCCCTGGACACGTaGAGGGCTGCCAGCACTCTG +
Preference number: 4 (lower is better)
Translates to: PRSLFSRSSGPSGNAQPLVSLDT*RAASTL
Trigger: CAGAGTGCTGGCAGCCCTGCACGTGTCCAGGGACAC...CAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGGACCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp CTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAGTCAACGAGCCAGACCCTGTaGTTGGCCTGGGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: LYDDSRSEVGPPTWQSESTSQTL*LAWAGT
Trigger: TGTTCCAGCCCAGGCCAAGCACAGGGTCTGGCTCGT...TGACTCTGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp CTTCCCCCGCTCCTTGACCGCTGTAGCACGGGACAGGGTGAAGATCTTCCAGACACGAGCCAGACCCTGTaGTTGGCCTGGGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: LPPLLDRCSTGQGEDLPDTSQTL*LAWAGT
Trigger: TGTTCCAGCCCAGGCCAAGCACAGGGTCTGGCTCGT...GTCTGGAAGATCTTCACCCTGTCCCGTGCTACAGCGGTCAAGGAGCGGGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR GCA 90 bp GGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGCCTCGTCCTTCATCACCTaGCTCGGAACCTCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: GTSDATWSNLVPSSPSPASSFIT*LGTSAS
Trigger: ACTTGCAGAGGTTCCGAGGCAGGTGATGAAGGACGA...GGCTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450388.7
CDS-3UTR CCA 90 bp TGTACAGAGAAGGAAACTGAGGGAGTACAGAGAGAGGCACGGAGCTGCCCAAGGGGGCGTCGCCATCCTTaGCCAGCCTTGCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: CTEKETEGVQREARSCPRGRRHP*PALPTP
Trigger: TGGCGTGGGCAAGGCTGGCCAAGGATGGCGACGCCC...CCTTGGGCAGCTCCGTGCCTCTCTCTGTACTCCCTCAGTTTCCTTCTCTGTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp ACGTGCAGGGCTGCCAGCACTCTGAACACGGGGGTCTCTTCCAGGAGGGTGGGCACTGTCACTCTTTGCTaGCAGGGGGTCTCAGGACTA +
Preference number: 4 (lower is better)
Translates to: TCRAASTLNTGVSSRRVGTVTLC*QGVSGL
Trigger: TAGTCCTGAGACCCCCTGCCAGCAAAGAGTGACAGT...GCCCACCCTCCTGGAAGAGACCCCCGTGTTCAGAGTGCTGGCAGCCCTGCACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp CTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAGTCAAGACCAGGGGCAGACTaGGTGGGAGGATCAACTCCC +
Preference number: 4 (lower is better)
Translates to: LYDDSRSEVGPPTWQSESRPGAD*VGGSTP
Trigger: GGGAGTTGATCCTCCCACCCAGTCTGCCCCTGGTCT...TGACTCTGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp CACCCACTCAGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCGGGCTTTTCCTGACCTaGGGTCGGGAGCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: HPLSGSLKCSVPGHVQGCGLFLT*GREQEE
Trigger: CTCCTCCTGCTCCCGACCTCAGGTCAGGAAAAGCCC...GCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACTGAGTGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp CCTGAATGCCCCTCAAGGTTACAGGCAGCCAGAAGGGGAGTTGTGGGAGGCCAGACCTGCCTCGGAACCTaGGAGGGCTCCAGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: PECPSRLQAARRGVVGGQTCLGT*EGSREK
Trigger: TTTCTCTCTGGAGCCCTCTCAGGTTCCGAGGCAGGT...CTGGCCTCCCACAACTCCCCTTCTGGCTGCCTGTAACCTTGAGGGGCATTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp TGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCTTTGGGGCATCTTCTaGCTTGAACCTCTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: WMGPLMPRGPTWSHPLPPLWGIF*LEPLPG
Trigger: TCCCGGGAGAGGTTCAAGTCAGAAGATGCCCCAAAG...GGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS-3UTR TCA 90 bp TGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCAGTAGCCGTGGACGGTaGTATAGAGGGCGTACATGG +
Preference number: 4 (lower is better)
Translates to: WMGPLMPRGPTWSHPLPPSSRGR*YRGRTW
Trigger: CCATGTACGCCCTCTATATCACCGTCCACGGCTACT...GGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp CTTTCTACCTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTAGAGGCCCAGCAGGGTaGGCACCTTCTTCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: LSTSTMTAGQRSGHPRGSRGPAG*APSSGS
Trigger: AGAACCGGAAGAAGGTGCTCACCCTGCTGGGCCTCT...ACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAGGTAGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp CTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAGTCAGGAACGCTGGCCTCCTaGATGCCCCTCAAGGTTACA +
Preference number: 4 (lower is better)
Translates to: LYDDSRSEVGPPTWQSESGTLAS*MPLKVT
Trigger: TGTAACCTTGAGGGGCATTCAGGAGGCCAGCGTTCC...TGACTCTGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp TTGCAGGGCCGTGCCTTCCTATTCTTGAGATGCGGAGTGGGCCTGGTCCAATCTGCCCCACACACTGAATaGGTGGGAGCACCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LQGRAFLFLRCGVGLVQSAPHTE*VGAPPG
Trigger: ACCTGGGGGTGCTCCCACTCATTCAGTGTGTGGGGC...AGATTGGACCAGGCCCACTCCGCATCTCAAGAATAGGAAGGCACGGCCCTGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR GCA 90 bp GGTGAAGATGGCCAACCCCCATGTCACACCCACCAGGCTCGAGAGGCCCAGCAGGCAAGTTTTCCACATTaGAGGAGTCGCTGCCCGACT +
Preference number: 4 (lower is better)
Translates to: GEDGQPPCHTHQAREAQQASFPH*RSRCPT
Trigger: AGTCGGGCAGCGACTCCTGCAATGTGGAAAACTTGC...CTGCTGGGCCTCTCGAGCCTGGTGGGTGTGACATGGGGGTTGGCCATCTTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR GCA 90 bp TCCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGTGTTCAACACGCCGCTaGCATCTCCCAGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: SLFSRSSGPSGNAQPLLRCSTRR*HLPGRA
Trigger: GGCTCGGCCTGGGAGATGGCAGCGGCGTGTTGAACA...CCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp ACGTGCAGGGCTGCCAGCACTCTGAACACGGGGGTCTCTTCCAGGAGGGTGGGCTTCCTATTCTTGAGATaGGGAGTGGGCCTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: TCRAASTLNTGVSSRRVGFLFLR*GVGLVQ
Trigger: TTGGACCAGGCCCACTCCGCATCTCAAGAATAGGAA...GCCCACCCTCCTGGAAGAGACCCCCGTGTTCAGAGTGCTGGCAGCCCTGCACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp CTGGTCCAATCTTGCAGTAGAGGAGGAGACTGTGGTGCTCTGACTTGGGAGGTAGGGCGTCGCCATCCTTaGCCAGCCTTGCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: LVQSCSRGGDCGALTWEVGRRHP*PALPTP
Trigger: TGGCGTGGGCAAGGCTGGCCAAGGATGGCGACGCCC...TACCTCCCAAGTCAGAGCACCACAGTCTCCTCCTCTACTGCAAGATTGGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR CCA 90 bp CTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAGTCACCAGAAGGGGAGTTGTaGGAGGCCAGTGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: LYDDSRSEVGPPTWQSESPEGEL*EASDKE
Trigger: CTCCTTGTCACTGGCCTCCCACAACTCCCCTTCTGG...TGACTCTGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR CAA 72 bp AGGGTGAGCACCTTCTTCCGGTTCTTCCCCCGCTCCTaGACCGCTGTAGCACGGGACAGGGTGAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: RVSTFFRFFPRS*TAVARDRVKIF
Trigger: GAAGATCTTCACCCTGTCCCGTGCTACAGCGGTCAAGGAGCGGGGGAAGAACCGGAAGAAGGTGCTCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR TCA 90 bp CTCTGTCAGGGGGCTTGTCCTCGTCCTTCATCACCTGCCTCGGAACCTGAGAGGCTGCAGTGTTGGTGCTaGGGTTCTGGACCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LCQGACPRPSSPASEPERLQCWC*GSGPKP
Trigger: AGGCTTTGGTCCAGAACCTCAGCACCAACACTGCAG...CCTCTCAGGTTCCGAGGCAGGTGATGAAGGACGAGGACAAGCCCCCTGACAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR TCA 90 bp GTGCTTGGCCTGGGCTGGAACAGTAAGCGAGGCCACCCAGGTCCTTGTTCTCTACAATGTCCAGAATGGTaGCGGCCAAGCGGACCACAG +
Preference number: 4 (lower is better)
Translates to: VLGLGWNSKRGHPGPCSLQCPEW*RPSGPQ
Trigger: CTGTGGTCCGCTTGGCCGTCACCATTCTGGACATTG...TAGAGAACAAGGACCTGGGTGGCCTCGCTTACTGTTCCAGCCCAGGCCAAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp GCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCCGGTCCCCTCAGGTCTaGCCTCCGTGGAGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: ANLLTWTLGPIVGSGWDLRSPQV*PPWSSP
Trigger: AGGGCTGCTCCACGGAGGTCAGACCTGAGGGGACCG...GAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp GCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGATGCCACACTCCCAGTGCCGATaGCCATCAGGGCGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: AYVDSWTYSWIWMGPLMPHSQCR*PSGRAG
Trigger: GCCTGCCCGCCCTGATGGTCATCGGCACTGGGAGTG...TGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp TTGCAGGGCCGTGCCTTCCTATTCTTGAGATGCGGAGTGGGCCTGGTCCAATCTAGAGGCCCAGCAGGGTaGGCACCTTCTTCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: LQGRAFLFLRCGVGLVQSRGPAG*APSSGS
Trigger: AGAACCGGAAGAAGGTGCTCACCCTGCTGGGCCTCT...AGATTGGACCAGGCCCACTCCGCATCTCAAGAATAGGAAGGCACGGCCCTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR TCA 90 bp TGTACAGAGAAGGAAACTGAGGGAGTACAGAGAGAGGCACGGAGCTGCCCAAGGAGAGGCCCAACGGGGTaGAGATGGCCAACCCCCATG +
Preference number: 4 (lower is better)
Translates to: CTEKETEGVQREARSCPRRGPTG*RWPTPM
Trigger: CATGGGGGTTGGCCATCTTCACCCCGTTGGGCCTCT...CCTTGGGCAGCTCCGTGCCTCTCTCTGTACTCCCTCAGTTTCCTTCTCTGTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp TCCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGCAGGAGGGTGGGCTCTaGTTGGATGGGCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: SLFSRSSGPSGNAQPLLRQEGGL*LDGQRP
Trigger: TGGTCTCTGCCCATCCAATCAGAGCCCACCCTCCTG...CCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp CAGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCCAGCACTCCATTGCAGGAGTCGCTaGCCGACTGCCTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: QWFFEMQCPWTRAGLPALHCRSR*PTACTW
Trigger: CCAAGTGCAGGCAGTCGGGCAGCGACTCCTGCAATG...GAGTGCTGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp TGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCGGACCACAGACCTGTTaGCTGGCAGGGATCGAAAAA +
Preference number: 4 (lower is better)
Translates to: WMGPLMPRGPTWSHPLPPGPQTC*LAGIEK
Trigger: TTTTTCGATCCCTGCCAGGCAACAGGTCTGTGGTCC...GGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp TGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACACACTGAATGAGTGGGAGCACATAGCTCCAGAGAGGTaGGGTTCTCCCTATCACGGA +
Preference number: 4 (lower is better)
Translates to: WQCPASAQGPHTLNEWEHIAPER*GSPYHG
Trigger: TCCGTGATAGGGAGAACCGCACCTCTCTGGAGCTAT...GTGCTCCCACTCATTCAGTGTGTGGGGCCCCTGAGCAGAGGCTGGGCATTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp ATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGGGCCTGGTCCAATCTTaGAGTAGAGGAGGAGACTGT +
Preference number: 4 (lower is better)
Translates to: MGPLMPRGPTWSHPLPPQGLVQS*SRGGDC
Trigger: ACAGTCTCCTCCTCTACTGCAAGATTGGACCAGGCC...CTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp AAGGTTACAGGCAGCCAGAAGGGGAGTTGTGGGAGGCCAGTGACAAGGAGGAGGCGCTGGCCTCCTGAATaGCCCTCAAGGTTACAGGCA +
Preference number: 4 (lower is better)
Translates to: KVTGSQKGSCGRPVTRRRRWPPE*PSRLQA
Trigger: TGCCTGTAACCTTGAGGGGCATTCAGGAGGCCAGCG...CCTCCTCCTTGTCACTGGCCTCCCACAACTCCCCTTCTGGCTGCCTGTAACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp GGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGCCAGTGGTTCTTTGAAATaGAGTGTCCCTGGACACGTG +
Preference number: 4 (lower is better)
Translates to: GTSDATWSNLVPSSPSPASGSLK*SVPGHV
Trigger: CACGTGTCCAGGGACACTGCATTTCAAAGAACCACT...GGCTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp ATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGCACAGACCTGTTGCCTaGCAGGGATCGAAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: MGPLMPRGPTWSHPLPPQHRPVA*QGSKKA
Trigger: AGCCTTTTTCGATCCCTGCCAGGCAACAGGTCTGTG...CTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp TGGATCTGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCACCCAGGGCCACGTaGATCTTTGGGGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: WIWMGPLMPRGPTWSHPLPPRAT*IFGASS
Trigger: AGAAGATGCCCCAAAGATCCACGTGGCCCTGGGTGG...GAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCAGATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS-3UTR CCA 90 bp TGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCTCTCCCTATCACGGATaGTGTAGAGGCCGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: WMGPLMPRGPTWSHPLPPSPYHG*CRGRSC
Trigger: ACAGCTACGGCCTCTACACCATCCGTGATAGGGAGA...GGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp AAGGTTACAGGCAGCCAGAAGGGGAGTTGTGGGAGGCCAGTGACAAGGAGGAGGCCAGAAGGGGAGTTGTaGGAGGCCAGTGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: KVTGSQKGSCGRPVTRRRPEGEL*EASDKE
Trigger: CTCCTTGTCACTGGCCTCCCACAACTCCCCTTCTGG...CCTCCTCCTTGTCACTGGCCTCCCACAACTCCCCTTCTGGCTGCCTGTAACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp CACCCACTCAGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCTGCCTGAGGGAACGCTaGCCTCCTGAATGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: HPLSGSLKCSVPGHVQGCCLRER*PPECPS
Trigger: TGAGGGGCATTCAGGAGGCCAGCGTTCCCTCAGGCA...GCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACTGAGTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp TCCTTCCAGGGCTATGCCAGCAACAGACTCTCCTCCCTTGCTGAGACCAGAAGGAGGGTGGGCTCTGATTaGATGGGCAGAGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: SFQGYASNRLSSLAETRRRVGSD*MGRDQG
Trigger: CCCCTGGTCTCTGCCCATCCAATCAGAGCCCACCCT...CCTTCTGGTCTCAGCAAGGGAGGAGAGTCTGTTGCTGGCATAGCCCTGGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp TGGATCTGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCACACACTGAATGAGTaGGAGCACCCCCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: WIWMGPLMPRGPTWSHPLHTLNE*EHPQVC
Trigger: GCACACCTGGGGGTGCTCCCACTCATTCAGTGTGTG...GAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCAGATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp CACCCACTCAGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCGTGCTTGGCCTGGGCTaGAACAGTAAGCGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: HPLSGSLKCSVPGHVQGCVLGLG*NSKRGH
Trigger: GTGGCCTCGCTTACTGTTCCAGCCCAGGCCAAGCAC...GCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACTGAGTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp TGGGAAGTCGCACTCTGTCAGGGGGCTTGTCCTCGTCCTTCATCACCTGCCTCGGCCTCTGAACAGCTCTaGGGTGCTAAGAAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: WEVALCQGACPRPSSPASASEQL*GAKKLL
Trigger: CAGGAGCTTCTTAGCACCCCAGAGCTGTTCAGAGGC...CGAGGCAGGTGATGAAGGACGAGGACAAGCCCCCTGACAGAGTGCGACTTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR TCA 90 bp GGAAAGGCGTGTTCACCTTCTGCGTCAAACCTTCCTTCATCAGATGGGCCTCGTGGGCTTTTCCTGACCTaGGGTCGGGAGCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GKACSPSASNLPSSDGPRGLFLT*GREQEE
Trigger: CTCCTCCTGCTCCCGACCTCAGGTCAGGAAAAGCCC...ACGAGGCCCATCTGATGAAGGAAGGTTTGACGCAGAAGGTGAACACGCCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR TCA 90 bp CAGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCCAGCACTCACCTGCCTCGGAACCTaGGAGGGCTCCAGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: QWFFEMQCPWTRAGLPALTCLGT*EGSREK
Trigger: TTTCTCTCTGGAGCCCTCTCAGGTTCCGAGGCAGGT...GAGTGCTGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp GCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGATGCCACGAGCCGGGGGCCCTTaGAGAGAGTCCCTGGACCAA +
Preference number: 4 (lower is better)
Translates to: AYVDSWTYSWIWMGPLMPRAGGP*RESLDQ
Trigger: TTGGTCCAGGGACTCTCTTCAAGGGCCCCCGGCTCG...TGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp TTCTACCTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGCTCAGCCAGCTTGGTaGCATGCATTTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: FYLYDDSRSEVGPPTWQSAQPAW*HAFVPH
Trigger: GTGTGGGACAAATGCATGTCACCAAGCTGGCTGAGC...TGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAGGTAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp GGGGGTTTGCCCAAGGTAGCTCACCCACTCAGTGGTTCTTTGAAATGCAGTGTCAGAGGCCCAACGGGGTaGAGATGGCCAACCCCCATG +
Preference number: 4 (lower is better)
Translates to: GGLPKVAHPLSGSLKCSVRGPTG*RWPTPM
Trigger: CATGGGGGTTGGCCATCTTCACCCCGTTGGGCCTCT...GACACTGCATTTCAAAGAACCACTGAGTGGGTGAGCTACCTTGGGCAAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp CACCCACTCAGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCACAGAGAGCCAGAGCTaGGTCCATATTGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: HPLSGSLKCSVPGHVQGCTESQS*VHIAGP
Trigger: CGGCCCTGCAATATGGACTCAGCTCTGGCTCTCTGT...GCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACTGAGTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp TCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACACTCAGTGGTTCTTTaGAATGCAGTGTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: SLGAQVLVAMPSLCSGAPHSVVL*NAVSLD
Trigger: GTCCAGGGACACTGCATTTCAAAGAACCACTGAGTG...TGGGGCCCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp ATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGTTCCTATTCTTGAGATaGGGAGTGGGCCTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: MGPLMPRGPTWSHPLPPQFLFLR*GVGLVQ
Trigger: TTGGACCAGGCCCACTCCGCATCTCAAGAATAGGAA...CTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp TGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCAGAGCCTTGCAAACCTaGTTACGTGGACTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: WMGPLMPRGPTWSHPLPPRALQT*LRGLLD
Trigger: GTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCT...GGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp AAGGTTACAGGCAGCCAGAAGGGGAGTTGTGGGAGGCCAGTGACAAGGAGGAGGCTCCTTCCAGGGCTATaGCAGCAACAGACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KVTGSQKGSCGRPVTRRRLLPGL*QQQTLL
Trigger: GAGGAGAGTCTGTTGCTGGCATAGCCCTGGAAGGAG...CCTCCTCCTTGTCACTGGCCTCCCACAACTCCCCTTCTGGCTGCCTGTAACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp TGGATCTGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCTCCTTCCAGGGCTATaGCAGCAACAGACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: WIWMGPLMPRGPTWSHPLLLPGL*QQQTLL
Trigger: GAGGAGAGTCTGTTGCTGGCATAGCCCTGGAAGGAG...GAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCAGATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp GGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGCCTATTTATTCAAGGTTTaGCACGAGCCAGACCCTGTG +
Preference number: 4 (lower is better)
Translates to: GTSDATWSNLVPSSPSPAYLFKV*HEPDPV
Trigger: CACAGGGTCTGGCTCGTGGCAAACCTTGAATAAATA...GGCTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp AGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGGGCGTCGCCATCCTTaGCCAGCCTTGCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: SLANLLTWTLGPIVGSGWGRRHP*PALPTP
Trigger: TGGCGTGGGCAAGGCTGGCCAAGGATGGCGACGCCC...CCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp AGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCCAGCACTCTTGGACTGGTCCAAGGTaGGTCTCAGGAGCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: SGSLKCSVPGHVQGCQHSWTGPR*VSGAGR
Trigger: TCGCCCTGCTCCTGAGACCCACCTTGGACCAGTCCA...AGAGTGCTGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp CCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGATATGCACCGTGGACTaGTCCAAGGTGGGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PCSLGAQVLVAMPSLCSGICTVD*SKVGLR
Trigger: CCTGAGACCCACCTTGGACCAGTCCACGGTGCATAT...CCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp TGGATCTGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCGATGCGGAGTGGGCCTaGTCCAATCTTGCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: WIWMGPLMPRGPTWSHPLDAEWA*SNLAVE
Trigger: CTCTACTGCAAGATTGGACCAGGCCCACTCCGCATC...GAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCAGATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp GACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAGTCAGGAGTGGGGGCAAACCTGCTTACGTaGACTCTTGGACCTATAGTT +
Preference number: 4 (lower is better)
Translates to: DSRSEVGPPTWQSESGVGANLLT*TLGPIV
Trigger: AACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGC...CCCCACTCCTGACTCTGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp AAGTGCAAAGATGTAGACGGTGGAGAGGCCCAACGGGGTGAAGATGGCCAACCCGAAATGCAGTGTCCCTaGACACGTGCAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KCKDVDGGEAQRGEDGQPEMQCP*TRAGLP
Trigger: TGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTC...GGGTTGGCCATCTTCACCCCGTTGGGCCTCTCCACCGTCTACATCTTTGCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR CCA 90 bp GGAGCACCCCCAGGTGTGCTGAGCCCCAGATTGTTTGCTTTCTACCTCTACGATGTGCTTGGCCTGGGCTaGAACAGTAAGCGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GAPPGVLSPRLFAFYLYDVLGLG*NSKRGH
Trigger: GTGGCCTCGCTTACTGTTCCAGCCCAGGCCAAGCAC...ATCGTAGAGGTAGAAAGCAAACAATCTGGGGCTCAGCACACCTGGGGGTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR CAA 72 bp ACAGACCTGTTGCCTGGCAGGGATCGAAAAAGGCTCTaGGGAAGTCGCACTCTGTCAGGGGGCTTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: TDLLPGRDRKRL*GSRTLSGGLSS
Trigger: CGAGGACAAGCCCCCTGACAGAGTGCGACTTCCCAAGAGCCTTTTTCGATCCCTGCCAGGCAACAGGTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR TCA 90 bp GCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCGGGCTTTTCCTGACCTaGGGTCGGGAGCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ANLLTWTLGPIVGSGWDLGLFLT*GREQEE
Trigger: CTCCTCCTGCTCCCGACCTCAGGTCAGGAAAAGCCC...GAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp TGTACAGAGAAGGAAACTGAGGGAGTACAGAGAGAGGCACGGAGCTGCCCAAGGGGGCATCTTCTGACTTaGACCTCTCCCGGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: CTEKETEGVQREARSCPRGHLLT*TSPGKA
Trigger: GGCTTTCCCGGGAGAGGTTCAAGTCAGAAGATGCCC...CCTTGGGCAGCTCCGTGCCTCTCTCTGTACTCCCTCAGTTTCCTTCTCTGTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS-3UTR TCA 90 bp TGTACAGAGAAGGAAACTGAGGGAGTACAGAGAGAGGCACGGAGCTGCCCAAGGCAAGGCCCATCCAGGTaGAGGCACAGAGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: CTEKETEGVQREARSCPRQGPSR*RHRAGS
Trigger: ACTTCCTGCTCTGTGCCTTCACCTGGATGGGCCTTG...CCTTGGGCAGCTCCGTGCCTCTCTCTGTACTCCCTCAGTTTCCTTCTCTGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS-3UTR TCA 90 bp GGCCGTGCCTTCCTATTCTTGAGATGCGGAGTGGGCCTGGTCCAATCTTGCAGTAGTAGCCGTGGACGGTaGTATAGAGGGCGTACATGG +
Preference number: 4 (lower is better)
Translates to: GRAFLFLRCGVGLVQSCSSSRGR*YRGRTW
Trigger: CCATGTACGCCCTCTATATCACCGTCCACGGCTACT...ACTGCAAGATTGGACCAGGCCCACTCCGCATCTCAAGAATAGGAAGGCACGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR TCA 90 bp GCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCAGAGGCCCAACGGGGTaGAGATGGCCAACCCCCATG +
Preference number: 4 (lower is better)
Translates to: ANLLTWTLGPIVGSGWDLRGPTG*RWPTPM
Trigger: CATGGGGGTTGGCCATCTTCACCCCGTTGGGCCTCT...GAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp CACCCACTCAGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCACTCTCCTCCCTTGCTaGGACCAGAAGGTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: HPLSGSLKCSVPGHVQGCTLLPC*DQKVSE
Trigger: CTCACTCACCTTCTGGTCTCAGCAAGGGAGGAGAGT...GCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACTGAGTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp CGTAGTTTAGCCAGTATCTGGGCAGCACAAAGAGGAGCCTCTGAACAGCTCTGGCATTGCAGGAGTCGCTaGCCGACTGCCTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: RSLASIWAAQRGASEQLWHCRSR*PTACTW
Trigger: CCAAGTGCAGGCAGTCGGGCAGCGACTCCTGCAATG...CCAGAGCTGTTCAGAGGCTCCTCTTTGTGCTGCCCAGATACTGGCTAAACTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR GCA 90 bp TGGATCTGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCGGACCACAGACCTGTTaGCTGGCAGGGATCGAAAAA +
Preference number: 4 (lower is better)
Translates to: WIWMGPLMPRGPTWSHPLGPQTC*LAGIEK
Trigger: TTTTTCGATCCCTGCCAGGCAACAGGTCTGTGGTCC...GAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCAGATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp TGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCGCCAGCTTGGTGACATaGATTTGTCCCACACTCAAA +
Preference number: 4 (lower is better)
Translates to: WMGPLMPRGPTWSHPLPPASLVT*ICPTLK
Trigger: TTTGAGTGTGGGACAAATGCATGTCACCAAGCTGGC...GGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp TGGATCTGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCATGCGTGTGAGGATATaGACCGTGGACTGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: WIWMGPLMPRGPTWSHPLMRVRI*TVDWSK
Trigger: CTTGGACCAGTCCACGGTGCATATCCTCACACGCAT...GAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCAGATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp GACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAGTCAGGAGTGGGGCAGATGAAGACACCTTaGAAGGAGTTGAAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: DSRSEVGPPTWQSESGVGQMKTP*KELKSA
Trigger: TGCACTTTTCAACTCCTTGCAAGGTGTCTTCATCTG...CCCCACTCCTGACTCTGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp CCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGGCCTGGTCCAATCTTaGAGTAGAGGAGGAGACTGT +
Preference number: 4 (lower is better)
Translates to: PCSLGAQVLVAMPSLCSGGLVQS*SRGGDC
Trigger: ACAGTCTCCTCCTCTACTGCAAGATTGGACCAGGCC...CCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp CAGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCCAGCACTCGTGACTGTCACTCTTTaGTGGCAGGGGGTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: QWFFEMQCPWTRAGLPALVTVTL*WQGVSG
Trigger: TCCTGAGACCCCCTGCCAGCAAAGAGTGACAGTCAC...GAGTGCTGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp CACCCACTCAGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCAAAACAAACCCCCAGTaGCTGAGGGAACGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HPLSGSLKCSVPGHVQGCKTNPQ*LRERWP
Trigger: AGGCCAGCGTTCCCTCAGGCACTGGGGGTTTGTTTT...GCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACTGAGTGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp TTGCAGGGCCGTGCCTTCCTATTCTTGAGATGCGGAGTGGGCCTGGTCCAATCTAAAACAAACCCCCAGTaGCTGAGGGAACGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LQGRAFLFLRCGVGLVQSKTNPQ*LRERWP
Trigger: AGGCCAGCGTTCCCTCAGGCACTGGGGGTTTGTTTT...AGATTGGACCAGGCCCACTCCGCATCTCAAGAATAGGAAGGCACGGCCCTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR CCA 90 bp GTGCTTGGCCTGGGCTGGAACAGTAAGCGAGGCCACCCAGGTCCTTGTTCTCTACACAGACCTGTTGCCTaGCAGGGATCGAAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: VLGLGWNSKRGHPGPCSLHRPVA*QGSKKA
Trigger: AGCCTTTTTCGATCCCTGCCAGGCAACAGGTCTGTG...TAGAGAACAAGGACCTGGGTGGCCTCGCTTACTGTTCCAGCCCAGGCCAAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp GGGCAGCACAAAGAGGAGCCTCTGAACAGCTCTGGGGTGCTAAGAAGCTCCTGGCACAGACCTGTTGCCTaGCAGGGATCGAAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: GQHKEEPLNSSGVLRSSWHRPVA*QGSKKA
Trigger: AGCCTTTTTCGATCCCTGCCAGGCAACAGGTCTGTG...CCAGGAGCTTCTTAGCACCCCAGAGCTGTTCAGAGGCTCCTCTTTGTGCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR CCA 90 bp TCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACTTGAAGAGAGTCCCTaGACCAATGTCCAGAATGGT +
Preference number: 4 (lower is better)
Translates to: SLGAQVLVAMPSLCSGAPLEESP*TNVQNG
Trigger: ACCATTCTGGACATTGGTCCAGGGACTCTCTTCAAG...TGGGGCCCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp TCCTTCCAGGGCTATGCCAGCAACAGACTCTCCTCCCTTGCTGAGACCAGAAGGGATGCGGAGTGGGCCTaGTCCAATCTTGCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: SFQGYASNRLSSLAETRRDAEWA*SNLAVE
Trigger: CTCTACTGCAAGATTGGACCAGGCCCACTCCGCATC...CCTTCTGGTCTCAGCAAGGGAGGAGAGTCTGTTGCTGGCATAGCCCTGGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp ATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGGCTTACGTGGACTCTTaGACCTATAGTTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: MGPLMPRGPTWSHPLPPQAYVDS*TYSWIW
Trigger: CCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC...CTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp TTCTACCTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAACTGTCACTCTTTGCTaGCAGGGGGTCTCAGGACTA +
Preference number: 4 (lower is better)
Translates to: FYLYDDSRSEVGPPTWQSTVTLC*QGVSGL
Trigger: TAGTCCTGAGACCCCCTGCCAGCAAAGAGTGACAGT...TGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAGGTAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp CAAATATTTATTCAAGGTTTGCCACGAGCCAGACCCTGTGCTTGGCCTGGGCTGCAGGGGCAGACTGGGTaGGAGGATCAACTCCCACCC +
Preference number: 4 (lower is better)
Translates to: QIFIQGLPRARPCAWPGLQGQTG*EDQLPP
Trigger: GGGTGGGAGTTGATCCTCCCACCCAGTCTGCCCCTG...CAGCCCAGGCCAAGCACAGGGTCTGGCTCGTGGCAAACCTTGAATAAATATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp GAAGTAGCCGTGGACGGTGATATAGAGGGCGTACATGGTTGTCCCTTCACGGAAAGGGTGGGCTCTGATTaGATGGGCAGAGACCAGGGG +
Preference number: 4 (lower is better)
Translates to: EVAVDGDIEGVHGCPFTERVGSD*MGRDQG
Trigger: CCCCTGGTCTCTGCCCATCCAATCAGAGCCCACCCT...TTCCGTGAAGGGACAACCATGTACGCCCTCTATATCACCGTCCACGGCTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR CCA 90 bp TCTGCGTCAAACCTTCCTTCATCAGATGGGCCTCGTAGTTTAGCCAGTATCTGGAGCTCTGTGGCTGTCTaGCCCTCTGGCCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SASNLPSSDGPRSLASIWSSVAV*PSGPRL
Trigger: GAGCCTGGGGCCAGAGGGCCAGACAGCCACAGAGCT...CCAGATACTGGCTAAACTACGAGGCCCATCTGATGAAGGAAGGTTTGACGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568245.5
3UTR CAA 72 bp GGTTTGCCCAAGGTAGCTCACCCACTCAGTGGTTCTTaGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLPKVAHPLSGS*KCSVPGHVQGC
Trigger: GCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACTGAGTGGGTGAGCTACCTTGGGCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp TTCTACCTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAACTGCCTGCACTTGGTaGAGCACAAAGCCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: FYLYDDSRSEVGPPTWQSTACTW*STKPCH
Trigger: ATGACAAGGCTTTGTGCTTCACCAAGTGCAGGCAGT...TGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAGGTAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp GTGTTGGTGCTGAGGTTCTGGACCAAAGCCTTCAGGAAAGGCGTGTTCACCTTCACCTGCCTCGGAACCTaGGAGGGCTCCAGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: VLVLRFWTKAFRKGVFTFTCLGT*EGSREK
Trigger: TTTCTCTCTGGAGCCCTCTCAGGTTCCGAGGCAGGT...GAAGGTGAACACGCCTTTCCTGAAGGCTTTGGTCCAGAACCTCAGCACCAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR TCA 90 bp GACTATAGGAACTTTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTACACTCCCAGTGCCGATaGCCATCAGGGCGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: DYRNFRALQTCLRGLLDLHSQCR*PSGRAG
Trigger: GCCTGCCCGCCCTGATGGTCATCGGCACTGGGAGTG...TAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCTATAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp GCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGATGCCAGGCAGGGCATGGAGGTaGCTGTCACTCTTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: AYVDSWTYSWIWMGPLMPGRAWR*LSLFAG
Trigger: GCCAGCAAAGAGTGACAGTCACCTCCATGCCCTGCC...TGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp CTTTCTACCTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTTGTCGTACATGTTGTTaGTCCCCAGGCAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LSTSTMTAGQRSGHPRGSCRTCC*SPGRCF
Trigger: GAAACACCTGCCTGGGGAGCAACAACATGTACGACA...ACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAGGTAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp GCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGATGCCAGAGTCGCTGCCCGACTaGCTGCACTTGGTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: AYVDSWTYSWIWMGPLMPESLPD*LHLVKH
Trigger: GTGCTTCACCAAGTGCAGGCAGTCGGGCAGCGACTC...TGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp GCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCCATTGCAGGAGTCGCTaGCCGACTGCCTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: ANLLTWTLGPIVGSGWDLHCRSR*PTACTW
Trigger: CCAAGTGCAGGCAGTCGGGCAGCGACTCCTGCAATG...GAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp CTTTCTACCTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTGGCGTGTTCACCTTCTaGGTCAAACCTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: LSTSTMTAGQRSGHPRGSGVFTF*VKPSFI
Trigger: GATGAAGGAAGGTTTGACGCAGAAGGTGAACACGCC...ACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAGGTAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp CACTCTGTCAGGGGGCTTGTCCTCGTCCTTCATCACCTGCCTCGGAACCTGAGAGGCGTGTTCACCTTCTaGGTCAAACCTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: HSVRGLVLVLHHLPRNLRGVFTF*VKPSFI
Trigger: GATGAAGGAAGGTTTGACGCAGAAGGTGAACACGCC...TCTCAGGTTCCGAGGCAGGTGATGAAGGACGAGGACAAGCCCCCTGACAGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR GCA 90 bp AAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGTGTTCAACACGCCGCTaGCATCTCCCAGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: KPAYVDSWTYSWIWMGPLCSTRR*HLPGRA
Trigger: GGCTCGGCCTGGGAGATGGCAGCGGCGTGTTGAACA...CAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp TCCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGATGCGTGTGAGGATATaGACCGTGGACTGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: SLFSRSSGPSGNAQPLLRMRVRI*TVDWSK
Trigger: CTTGGACCAGTCCACGGTGCATATCCTCACACGCAT...CCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp TGGATCTGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCAGAGCCTTGCAAACCTaGTTACGTGGACTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: WIWMGPLMPRGPTWSHPLRALQT*LRGLLD
Trigger: GTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCT...GAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCAGATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp TGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCTATTTATTCAAGGTTTaGCACGAGCCAGACCCTGTG +
Preference number: 4 (lower is better)
Translates to: WMGPLMPRGPTWSHPLPPYLFKV*HEPDPV
Trigger: CACAGGGTCTGGCTCGTGGCAAACCTTGAATAAATA...GGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp CTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAGTCATTGGTGCTGAGGTTCTaGACCAAAGCCTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LYDDSRSEVGPPTWQSESLVLRF*TKAFRK
Trigger: TTTCCTGAAGGCTTTGGTCCAGAACCTCAGCACCAA...TGACTCTGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp GCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGGACTGGTCCAAGGTaGGTCTCAGGAGCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: ANLLTWTLGPIVGSGWDLWTGPR*VSGAGR
Trigger: TCGCCCTGCTCCTGAGACCCACCTTGGACCAGTCCA...GAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp CCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGTATAGAGGGCGTACATaGTTGTCCCTTCACGGAACC +
Preference number: 4 (lower is better)
Translates to: PCSLGAQVLVAMPSLCSGYRGRT*LSLHGT
Trigger: GGTTCCGTGAAGGGACAACCATGTACGCCCTCTATA...CCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp ATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGGCAAACCTGCTTACGTaGACTCTTGGACCTATAGTT +
Preference number: 4 (lower is better)
Translates to: MGPLMPRGPTWSHPLPPQANLLT*TLGPIV
Trigger: AACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGC...CTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp GGGGGTTTGCCCAAGGTAGCTCACCCACTCAGTGGTTCTTTGAAATGCAGTGTCGAAATGCAGTGTCCCTaGACACGTGCAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GGLPKVAHPLSGSLKCSVEMQCP*TRAGLP
Trigger: TGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTC...GACACTGCATTTCAAAGAACCACTGAGTGGGTGAGCTACCTTGGGCAAACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp TCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGCCCCAAGCTCACCCACTCAGTaGTTCTTTGAAATGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SLGAQVLVAMPSLCSGAPSSPTQ*FFEMQC
Trigger: ACACTGCATTTCAAAGAACCACTGAGTGGGTGAGCT...TGGGGCCCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp AACAAATATTTATTCAAGGTTTGCCACGAGCCAGACCCTGTGCTTGGCCTGGGCGTCGGGCCACCCACGTaGCAGTCAGAGTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: NKYLFKVCHEPDPVLGLGVGPPT*QSESGV
Trigger: CACTCCTGACTCTGACTGCCACGTGGGTGGCCCGAC...GCCCAGGCCAAGCACAGGGTCTGGCTCGTGGCAAACCTTGAATAAATATTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR CAA 72 bp GCTGAGTCCATATTGCAGGGCCGTGCCTTCCTATTCTaGAGATGCGGAGTGGGCCTGGTCCAATCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: AESILQGRAFLF*RCGVGLVQSCS
Trigger: ACTGCAAGATTGGACCAGGCCCACTCCGCATCTCAAGAATAGGAAGGCACGGCCCTGCAATATGGACTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
3UTR CAA 72 bp CCCAAGGTCACACAGAGAGCCAGAGCTGAGTCCATATaGCAGGGCCGTGCCTTCCTATTCTTGAGATGCGGA +
Preference number: 4 (lower is better)
Translates to: PKVTQRARAESI*QGRAFLFLRCG
Trigger: TCCGCATCTCAAGAATAGGAAGGCACGGCCCTGCAATATGGACTCAGCTCTGGCTCTCTGTGTGACCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR TCA 90 bp TTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGGGGGGCGGTCGCTGGTaGGAGAAGACGATCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LEPCKPAYVDSWTYSWIWGGGRW*EKTISR
Trigger: TCTGGAGATCGTCTTCTCTCACCAGCGACCGCCCCC...CCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAA
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp GGAGCACCCCCAGGTGTGCTGAGCCCCAGATTGTTTGCTTTCTACCTCTACGATAGCCACTCCCCACATTaGCCAAGAAGGCCAGATTCA +
Preference number: 4 (lower is better)
Translates to: GAPPGVLSPRLFAFYLYDSHSPH*PRRPDS
Trigger: TGAATCTGGCCTTCTTGGTCAATGTGGGGAGTGGCT...ATCGTAGAGGTAGAAAGCAAACAATCTGGGGCTCAGCACACCTGGGGGTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333493.9
CDS-3UTR TCA 90 bp AAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGAGAGGCCCAGCAGGGTaGGCACCTTCTTCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: KPAYVDSWTYSWIWMGPLRGPAG*APSSGS
Trigger: AGAACCGGAAGAAGGTGCTCACCCTGCTGGGCCTCT...CAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp GCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCGGAACGCTGGCCTCCTaGATGCCCCTCAAGGTTACA +
Preference number: 4 (lower is better)
Translates to: ANLLTWTLGPIVGSGWDLGTLAS*MPLKVT
Trigger: TGTAACCTTGAGGGGCATTCAGGAGGCCAGCGTTCC...GAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp TCCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGCACTCAGTGGTTCTTTaGAATGCAGTGTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: SLFSRSSGPSGNAQPLLRHSVVL*NAVSLD
Trigger: GTCCAGGGACACTGCATTTCAAAGAACCACTGAGTG...CCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp AAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGATCCTTGGCCAGCCTTaGCCACGCCAGGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: KPAYVDSWTYSWIWMGPLILGQP*PRQELC
Trigger: ACAGAGCTCCTGGCGTGGGCAAGGCTGGCCAAGGAT...CAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS-3UTR GCA 90 bp TCAAACCTTCCTTCATCAGATGGGCCTCGTAGTTTAGCCAGTATCTGGGCAGCAATCCTTGGCCAGCCTTaGCCACGCCAGGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SNLPSSDGPRSLASIWAAILGQP*PRQELC
Trigger: ACAGAGCTCCTGGCGTGGGCAAGGCTGGCCAAGGAT...TGCTGCCCAGATACTGGCTAAACTACGAGGCCCATCTGATGAAGGAAGGTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR GCA 90 bp ATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGGAAATAGAAGTCTTCTaGAGTGTTGGTGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: MGPLMPRGPTWSHPLPPQEIEVF*SVGAEV
Trigger: AACCTCAGCACCAACACTGCAGAAGACTTCTATTTC...CTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp AAGGTTACAGGCAGCCAGAAGGGGAGTTGTGGGAGGCCAGTGACAAGGAGGAGGGCCAGCTTGGTGACATaGATTTGTCCCACACTCAAA +
Preference number: 4 (lower is better)
Translates to: KVTGSQKGSCGRPVTRRRASLVT*ICPTLK
Trigger: TTTGAGTGTGGGACAAATGCATGTCACCAAGCTGGC...CCTCCTCCTTGTCACTGGCCTCCCACAACTCCCCTTCTGGCTGCCTGTAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp TCCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGTTCCTATTCTTGAGATaGGGAGTGGGCCTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: SLFSRSSGPSGNAQPLLRFLFLR*GVGLVQ
Trigger: TTGGACCAGGCCCACTCCGCATCTCAAGAATAGGAA...CCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp GAAGTAGCCGTGGACGGTGATATAGAGGGCGTACATGGTTGTCCCTTCACGGAAATATGCACCGTGGACTaGTCCAAGGTGGGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: EVAVDGDIEGVHGCPFTEICTVD*SKVGLR
Trigger: CCTGAGACCCACCTTGGACCAGTCCACGGTGCATAT...TTCCGTGAAGGGACAACCATGTACGCCCTCTATATCACCGTCCACGGCTACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR CCA 90 bp CACCCACTCAGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCTATAGAGGGCGTACATaGTTGTCCCTTCACGGAACC +
Preference number: 4 (lower is better)
Translates to: HPLSGSLKCSVPGHVQGCYRGRT*LSLHGT
Trigger: GGTTCCGTGAAGGGACAACCATGTACGCCCTCTATA...GCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACTGAGTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp CCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGTGTGGTGCTCTGACTTaGGAGGTAAAGGATGGTGAA +
Preference number: 4 (lower is better)
Translates to: PCSLGAQVLVAMPSLCSGCGALT*EVKDGE
Trigger: TTCACCATCCTTTACCTCCCAAGTCAGAGCACCACA...CCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp GTGCTTGGCCTGGGCTGGAACAGTAAGCGAGGCCACCCAGGTCCTTGTTCTCTAGCTTACGTGGACTCTTaGACCTATAGTTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: VLGLGWNSKRGHPGPCSLAYVDS*TYSWIW
Trigger: CCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC...TAGAGAACAAGGACCTGGGTGGCCTCGCTTACTGTTCCAGCCCAGGCCAAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp AGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGAGACCAGGGGCAGACTaGGTGGGAGGATCAACTCCC +
Preference number: 4 (lower is better)
Translates to: SLANLLTWTLGPIVGSGWRPGAD*VGGSTP
Trigger: GGGAGTTGATCCTCCCACCCAGTCTGCCCCTGGTCT...CCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp GCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGATGCCACACACACTGAATGAGTaGGAGCACCCCCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: AYVDSWTYSWIWMGPLMPHTLNE*EHPQVC
Trigger: GCACACCTGGGGGTGCTCCCACTCATTCAGTGTGTG...TGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
3UTR CAA 72 bp GCAATGAGGGCAGGGCATGGAGGTGACTGTCACTCTTaGCTGGCAGGGGGTCTCAGGACTATAGGAACTTTA +
Preference number: 4 (lower is better)
Translates to: AMRAGHGGDCHS*LAGGLRTIGTL
Trigger: TAAAGTTCCTATAGTCCTGAGACCCCCTGCCAGCAAAGAGTGACAGTCACCTCCATGCCCTGCCCTCATTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp TCACTCTTTGCTGGCAGGGGGTCTCAGGACTATAGGAACTTTAGAGCCTTGCAACCTGGGAGATGCGTGTaGGGATATGCACCGTGGACT +
Preference number: 4 (lower is better)
Translates to: SLFAGRGSQDYRNFRALQPGRCV*GYAPWT
Trigger: AGTCCACGGTGCATATCCTCACACGCATCTCCCAGG...TTGCAAGGCTCTAAAGTTCCTATAGTCCTGAGACCCCCTGCCAGCAAAGAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp GCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGATGCCACTTTGGGGCATCTTCTaGCTTGAACCTCTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: AYVDSWTYSWIWMGPLMPLWGIF*LEPLPG
Trigger: TCCCGGGAGAGGTTCAAGTCAGAAGATGCCCCAAAG...TGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS-3UTR TCA 90 bp AAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGCAAGGCCCATCCAGGTaGAGGCACAGAGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: KPAYVDSWTYSWIWMGPLQGPSR*RHRAGS
Trigger: ACTTCCTGCTCTGTGCCTTCACCTGGATGGGCCTTG...CAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS-3UTR TCA 90 bp GCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGATGCCAAGTAGCCGTGGACGGTaGTATAGAGGGCGTACATGG +
Preference number: 4 (lower is better)
Translates to: AYVDSWTYSWIWMGPLMPSSRGR*YRGRTW
Trigger: CCATGTACGCCCTCTATATCACCGTCCACGGCTACT...TGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp GCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGATGCCAACTCTCCTCCCTTGCTaGGACCAGAAGGTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: AYVDSWTYSWIWMGPLMPTLLPC*DQKVSE
Trigger: CTCACTCACCTTCTGGTCTCAGCAAGGGAGGAGAGT...TGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp TCACTCTTTGCTGGCAGGGGGTCTCAGGACTATAGGAACTTTAGAGCCTTGCAACACCCCCAGGTGTGCTaGGCCCCAGATTGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SLFAGRGSQDYRNFRALQHPQVC*APDCLL
Trigger: AAGCAAACAATCTGGGGCTCAGCACACCTGGGGGTG...TTGCAAGGCTCTAAAGTTCCTATAGTCCTGAGACCCCCTGCCAGCAAAGAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp TTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGGAGTCGCTGCCCGACTaGCTGCACTTGGTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LEPCKPAYVDSWTYSWIWESLPD*LHLVKH
Trigger: GTGCTTCACCAAGTGCAGGCAGTCGGGCAGCGACTC...CCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp CGTAGTTTAGCCAGTATCTGGGCAGCACAAAGAGGAGCCTCTGAACAGCTCTGGGCAAGTTTTCCACATTaGAGGAGTCGCTGCCCGACT +
Preference number: 4 (lower is better)
Translates to: RSLASIWAAQRGASEQLWASFPH*RSRCPT
Trigger: AGTCGGGCAGCGACTCCTGCAATGTGGAAAACTTGC...CCAGAGCTGTTCAGAGGCTCCTCTTTGTGCTGCCCAGATACTGGCTAAACTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR GCA 90 bp CGTAGTTTAGCCAGTATCTGGGCAGCACAAAGAGGAGCCTCTGAACAGCTCTGGGGACCACAGACCTGTTaGCTGGCAGGGATCGAAAAA +
Preference number: 4 (lower is better)
Translates to: RSLASIWAAQRGASEQLWGPQTC*LAGIEK
Trigger: TTTTTCGATCCCTGCCAGGCAACAGGTCTGTGGTCC...CCAGAGCTGTTCAGAGGCTCCTCTTTGTGCTGCCCAGATACTGGCTAAACTACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR GCA 90 bp GACTATAGGAACTTTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATGTTCAACACGCCGCTaGCATCTCCCAGGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: DYRNFRALQTCLRGLLDLCSTRR*HLPGRA
Trigger: GGCTCGGCCTGGGAGATGGCAGCGGCGTGTTGAACA...TAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCTATAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp CTGGTCCAATCTTGCAGTAGAGGAGGAGACTGTGGTGCTCTGACTTGGGAGGTAATGCGTGTGAGGATATaGACCGTGGACTGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: LVQSCSRGGDCGALTWEVMRVRI*TVDWSK
Trigger: CTTGGACCAGTCCACGGTGCATATCCTCACACGCAT...TACCTCCCAAGTCAGAGCACCACAGTCTCCTCCTCTACTGCAAGATTGGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR GCA 90 bp CTGGTCCAATCTTGCAGTAGAGGAGGAGACTGTGGTGCTCTGACTTGGGAGGTAATAGCTCCAGAGAGGTaGGGTTCTCCCTATCACGGA +
Preference number: 4 (lower is better)
Translates to: LVQSCSRGGDCGALTWEVIAPER*GSPYHG
Trigger: TCCGTGATAGGGAGAACCGCACCTCTCTGGAGCTAT...TACCTCCCAAGTCAGAGCACCACAGTCTCCTCCTCTACTGCAAGATTGGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR GCA 90 bp GAAGTAGCCGTGGACGGTGATATAGAGGGCGTACATGGTTGTCCCTTCACGGAAGGCCTGGTCCAATCTTaGAGTAGAGGAGGAGACTGT +
Preference number: 4 (lower is better)
Translates to: EVAVDGDIEGVHGCPFTEGLVQS*SRGGDC
Trigger: ACAGTCTCCTCCTCTACTGCAAGATTGGACCAGGCC...TTCCGTGAAGGGACAACCATGTACGCCCTCTATATCACCGTCCACGGCTACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR CCA 90 bp GCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGATGCCACAGGCAGGTGTTTCTTaGCCCTTCGGTGGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: AYVDSWTYSWIWMGPLMPQAGVS*PFGGLF
Trigger: GAAAAGCCCACCGAAGGGCCAAGAAACACCTGCCTG...TGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp CCTCGGAACCTGAGAGGGCTCCAGAGAGAAATAGAAGTCTTCTGCAGTGTTGGTCAGGCAGGTGTTTCTTaGCCCTTCGGTGGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: PRNLRGLQREIEVFCSVGQAGVS*PFGGLF
Trigger: GAAAAGCCCACCGAAGGGCCAAGAAACACCTGCCTG...ACCAACACTGCAGAAGACTTCTATTTCTCTCTGGAGCCCTCTCAGGTTCCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR CCA 90 bp TGTTGCCTGGCAGGGATCGAAAAAGGCTCTTGGGAAGTCGCACTCTGTCAGGGGATCGAAAAAGGCTCTTaGGAAGTCGCACTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: CCLAGIEKGSWEVALCQGIEKGS*EVALCQ
Trigger: CTGACAGAGTGCGACTTCCCAAGAGCCTTTTTCGAT...CCCCTGACAGAGTGCGACTTCCCAAGAGCCTTTTTCGATCCCTGCCAGGCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR CCA 90 bp TGTACAGAGAAGGAAACTGAGGGAGTACAGAGAGAGGCACGGAGCTGCCCAAGGTATAGAGGGCGTACATaGTTGTCCCTTCACGGAACC +
Preference number: 4 (lower is better)
Translates to: CTEKETEGVQREARSCPRYRGRT*LSLHGT
Trigger: GGTTCCGTGAAGGGACAACCATGTACGCCCTCTATA...CCTTGGGCAGCTCCGTGCCTCTCTCTGTACTCCCTCAGTTTCCTTCTCTGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp AACAAATATTTATTCAAGGTTTGCCACGAGCCAGACCCTGTGCTTGGCCTGGGCCTGCAGTGTTGGTGCTaGGGTTCTGGACCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: NKYLFKVCHEPDPVLGLGLQCWC*GSGPKP
Trigger: AGGCTTTGGTCCAGAACCTCAGCACCAACACTGCAG...GCCCAGGCCAAGCACAGGGTCTGGCTCGTGGCAAACCTTGAATAAATATTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp TTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGCCTGGGAGATGCGTGTaGGGATATGCACCGTGGACT +
Preference number: 4 (lower is better)
Translates to: LEPCKPAYVDSWTYSWIWPGRCV*GYAPWT
Trigger: AGTCCACGGTGCATATCCTCACACGCATCTCCCAGG...CCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp TTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGACAGAGAGCCAGAGCTaGGTCCATATTGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: LEPCKPAYVDSWTYSWIWTESQS*VHIAGP
Trigger: CGGCCCTGCAATATGGACTCAGCTCTGGCTCTCTGT...CCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp GACTATAGGAACTTTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTAGAGTCGCTGCCCGACTaGCTGCACTTGGTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: DYRNFRALQTCLRGLLDLESLPD*LHLVKH
Trigger: GTGCTTCACCAAGTGCAGGCAGTCGGGCAGCGACTC...TAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCTATAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp GACTATAGGAACTTTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTACATTGCAGGAGTCGCTaGCCGACTGCCTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: DYRNFRALQTCLRGLLDLHCRSR*PTACTW
Trigger: CCAAGTGCAGGCAGTCGGGCAGCGACTCCTGCAATG...TAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCTATAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp GCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCGCAAGTTTTCCACATTaGAGGAGTCGCTGCCCGACT +
Preference number: 4 (lower is better)
Translates to: ANLLTWTLGPIVGSGWDLASFPH*RSRCPT
Trigger: AGTCGGGCAGCGACTCCTGCAATGTGGAAAACTTGC...GAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp CTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAGTCATTTAGCCAGTATCTCTaGAAGTTTTCCACATTGCAG +
Preference number: 4 (lower is better)
Translates to: LYDDSRSEVGPPTWQSESFSQYL*KFSTLQ
Trigger: CTGCAATGTGGAAAACTTGCAGAGATACTGGCTAAA...TGACTCTGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp GCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGATGCCAATAGCTCCAGAGAGGTaGGGTTCTCCCTATCACGGA +
Preference number: 4 (lower is better)
Translates to: AYVDSWTYSWIWMGPLMPIAPER*GSPYHG
Trigger: TCCGTGATAGGGAGAACCGCACCTCTCTGGAGCTAT...TGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp CCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGCAGATGAAGACACCTTaGAAGGAGTTGAAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: PCSLGAQVLVAMPSLCSGQMKTP*KELKSA
Trigger: TGCACTTTTCAACTCCTTGCAAGGTGTCTTCATCTG...CCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp CAATCTTGCAGTAGAGGAGGAGACTGTGGTGCTCTGACTTGGGAGGTAAAGGATCAGGCAGGTGTTTCTTaGCCCTTCGGTGGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: QSCSRGGDCGALTWEVKDQAGVS*PFGGLF
Trigger: GAAAAGCCCACCGAAGGGCCAAGAAACACCTGCCTG...ATCCTTTACCTCCCAAGTCAGAGCACCACAGTCTCCTCCTCTACTGCAAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR TCA 90 bp TTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGCTGCAGTGTTGGTGCTaGGGTTCTGGACCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LEPCKPAYVDSWTYSWIWLQCWC*GSGPKP
Trigger: AGGCTTTGGTCCAGAACCTCAGCACCAACACTGCAG...CCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR TCA 90 bp GACTATAGGAACTTTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTAGGGCATCTTCTGACTTaGACCTCTCCCGGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: DYRNFRALQTCLRGLLDLGHLLT*TSPGKA
Trigger: GGCTTTCCCGGGAGAGGTTCAAGTCAGAAGATGCCC...TAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCTATAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS-3UTR TCA 90 bp AAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGAGCCACTCCCCACATTaGCCAAGAAGGCCAGATTCA +
Preference number: 4 (lower is better)
Translates to: KPAYVDSWTYSWIWMGPLSHSPH*PRRPDS
Trigger: TGAATCTGGCCTTCTTGGTCAATGTGGGGAGTGGCT...CAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS-3UTR TCA 90 bp GCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTACAGAGAAGGAAACTaGGGGAGTACAGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: ANLLTWTLGPIVGSGWDLYREGN*GSTERG
Trigger: GCCTCTCTCTGTACTCCCTCAGTTTCCTTCTCTGTA...GAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp TCACTCTTTGCTGGCAGGGGGTCTCAGGACTATAGGAACTTTAGAGCCTTGCAATTTCTACCTCTACGATaGCAGCAGGTCAGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: SLFAGRGSQDYRNFRALQFLPLR*QQVRGR
Trigger: CCGACCTCTGACCTGCTGTCATCGTAGAGGTAGAAA...TTGCAAGGCTCTAAAGTTCCTATAGTCCTGAGACCCCCTGCCAGCAAAGAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp GCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCGGCGTGTTCACCTTCTaGGTCAAACCTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: ANLLTWTLGPIVGSGWDLGVFTF*VKPSFI
Trigger: GATGAAGGAAGGTTTGACGCAGAAGGTGAACACGCC...GAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp GAAGTAGCCGTGGACGGTGATATAGAGGGCGTACATGGTTGTCCCTTCACGGAAAGTGGTTCTTTGAAATaGAGTGTCCCTGGACACGTG +
Preference number: 4 (lower is better)
Translates to: EVAVDGDIEGVHGCPFTESGSLK*SVPGHV
Trigger: CACGTGTCCAGGGACACTGCATTTCAAAGAACCACT...TTCCGTGAAGGGACAACCATGTACGCCCTCTATATCACCGTCCACGGCTACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR GCA 90 bp GCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGATGCCACTGCCTCGGAACCTCTaGAAGTTTTCCACATTGCAG +
Preference number: 4 (lower is better)
Translates to: AYVDSWTYSWIWMGPLMPLPRNL*KFSTLQ
Trigger: CTGCAATGTGGAAAACTTGCAGAGGTTCCGAGGCAG...TGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450388.7
CDS-3UTR CCA 90 bp GGAAAGGCGTGTTCACCTTCTGCGTCAAACCTTCCTTCATCAGATGGGCCTCGTTTGGTGCTGAGGTTCTaGACCAAAGCCTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: GKACSPSASNLPSSDGPRLVLRF*TKAFRK
Trigger: TTTCCTGAAGGCTTTGGTCCAGAACCTCAGCACCAA...ACGAGGCCCATCTGATGAAGGAAGGTTTGACGCAGAAGGTGAACACGCCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR CCA 90 bp AAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGCACAGACCTGTTGCCTaGCAGGGATCGAAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: KPAYVDSWTYSWIWMGPLHRPVA*QGSKKA
Trigger: AGCCTTTTTCGATCCCTGCCAGGCAACAGGTCTGTG...CAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp AACAAATATTTATTCAAGGTTTGCCACGAGCCAGACCCTGTGCTTGGCCTGGGCTCTCCCTATCACGGATaGTGTAGAGGCCGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: NKYLFKVCHEPDPVLGLGSPYHG*CRGRSC
Trigger: ACAGCTACGGCCTCTACACCATCCGTGATAGGGAGA...GCCCAGGCCAAGCACAGGGTCTGGCTCGTGGCAAACCTTGAATAAATATTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp AAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGTCTCCCTATCACGGATaGTGTAGAGGCCGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: KPAYVDSWTYSWIWMGPLSPYHG*CRGRSC
Trigger: ACAGCTACGGCCTCTACACCATCCGTGATAGGGAGA...CAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp GAAGTAGCCGTGGACGGTGATATAGAGGGCGTACATGGTTGTCCCTTCACGGAATGTGGTGCTCTGACTTaGGAGGTAAAGGATGGTGAA +
Preference number: 4 (lower is better)
Translates to: EVAVDGDIEGVHGCPFTECGALT*EVKDGE
Trigger: TTCACCATCCTTTACCTCCCAAGTCAGAGCACCACA...TTCCGTGAAGGGACAACCATGTACGCCCTCTATATCACCGTCCACGGCTACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR CCA 90 bp TCATCACCTGCCTCGGAACCTGAGAGGGCTCCAGAGAGAAATAGAAGTCTTCTGAGTTTAGCCAGTATCTaGGCAGCACAAAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SSPASEPERAPERNRSLLSLASI*AAQRGA
Trigger: GGCTCCTCTTTGTGCTGCCCAGATACTGGCTAAACT...CAGAAGACTTCTATTTCTCTCTGGAGCCCTCTCAGGTTCCGAGGCAGGTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR TCA 90 bp GACTATAGGAACTTTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTAGCTCAGCCAGCTTGGTaGCATGCATTTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: DYRNFRALQTCLRGLLDLAQPAW*HAFVPH
Trigger: GTGTGGGACAAATGCATGTCACCAAGCTGGCTGAGC...TAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCTATAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp AAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGTACAGAGAAGGAAACTaGGGGAGTACAGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: KPAYVDSWTYSWIWMGPLYREGN*GSTERG
Trigger: GCCTCTCTCTGTACTCCCTCAGTTTCCTTCTCTGTA...CAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp AGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGAGAGCCTTGCAAACCTaGTTACGTGGACTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SLANLLTWTLGPIVGSGWRALQT*LRGLLD
Trigger: GTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCT...CCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp GACTATAGGAACTTTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTACAGGCAGGTGTTTCTTaGCCCTTCGGTGGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: DYRNFRALQTCLRGLLDLQAGVS*PFGGLF
Trigger: GAAAAGCCCACCGAAGGGCCAAGAAACACCTGCCTG...TAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCTATAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp GCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGATGCCAATCGAAAAAGGCTCTTaGGAAGTCGCACTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: AYVDSWTYSWIWMGPLMPIEKGS*EVALCQ
Trigger: CTGACAGAGTGCGACTTCCCAAGAGCCTTTTTCGAT...TGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp GCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCCTTGAAGAGAGTCCCTaGACCAATGTCCAGAATGGT +
Preference number: 4 (lower is better)
Translates to: ANLLTWTLGPIVGSGWDLLEESP*TNVQNG
Trigger: ACCATTCTGGACATTGGTCCAGGGACTCTCTTCAAG...GAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp GACTATAGGAACTTTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTAGATGCGGAGTGGGCCTaGTCCAATCTTGCAGTAGAG +
Preference number: 4 (lower is better)
Translates to: DYRNFRALQTCLRGLLDLDAEWA*SNLAVE
Trigger: CTCTACTGCAAGATTGGACCAGGCCCACTCCGCATC...TAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCTATAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp TATAGAGGGCGTACATGGTTGTCCCTTCACGGAACCAGCATAGCTCCAGAGAGGAGCTCACCCACTCAGTaGTTCTTTGAAATGCAGTGT +
Preference number: 4 (lower is better)
Translates to: YRGRTWLSLHGTSIAPERSSPTQ*FFEMQC
Trigger: ACACTGCATTTCAAAGAACCACTGAGTGGGTGAGCT...CCTCTCTGGAGCTATGCTGGTTCCGTGAAGGGACAACCATGTACGCCCTCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR TCA 90 bp GAAGTAGCCGTGGACGGTGATATAGAGGGCGTACATGGTTGTCCCTTCACGGAACACCTTGCAAGGAGTTaGAAAGTGCAAAGATGTAGA +
Preference number: 4 (lower is better)
Translates to: EVAVDGDIEGVHGCPFTEHLARS*KVQRCR
Trigger: TCTACATCTTTGCACTTTTCAACTCCTTGCAAGGTG...TTCCGTGAAGGGACAACCATGTACGCCCTCTATATCACCGTCCACGGCTACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR GCA 90 bp TATAGAGGGCGTACATGGTTGTCCCTTCACGGAACCAGCATAGCTCCAGAGAGGGAAATAGAAGTCTTCTaGAGTGTTGGTGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: YRGRTWLSLHGTSIAPEREIEVF*SVGAEV
Trigger: AACCTCAGCACCAACACTGCAGAAGACTTCTATTTC...CCTCTCTGGAGCTATGCTGGTTCCGTGAAGGGACAACCATGTACGCCCTCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR GCA 90 bp GACTATAGGAACTTTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTAGGACCACAGACCTGTTaGCTGGCAGGGATCGAAAAA +
Preference number: 4 (lower is better)
Translates to: DYRNFRALQTCLRGLLDLGPQTC*LAGIEK
Trigger: TTTTTCGATCCCTGCCAGGCAACAGGTCTGTGGTCC...TAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCTATAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp AAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGGCCAGCTTGGTGACATaGATTTGTCCCACACTCAAA +
Preference number: 4 (lower is better)
Translates to: KPAYVDSWTYSWIWMGPLASLVT*ICPTLK
Trigger: TTTGAGTGTGGGACAAATGCATGTCACCAAGCTGGC...CAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp AACAAATATTTATTCAAGGTTTGCCACGAGCCAGACCCTGTGCTTGGCCTGGGCGGAACTTTAGAGCCTTaGAAACCTGCTTACGTGGAC +
Preference number: 4 (lower is better)
Translates to: NKYLFKVCHEPDPVLGLGGTLEP*KPAYVD
Trigger: GTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCC...GCCCAGGCCAAGCACAGGGTCTGGCTCGTGGCAAACCTTGAATAAATATTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR GCA 90 bp AGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGGAACTTTAGAGCCTTaGAAACCTGCTTACGTGGAC +
Preference number: 4 (lower is better)
Translates to: SLANLLTWTLGPIVGSGWGTLEP*KPAYVD
Trigger: GTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCC...CCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp AAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGTTGGTGCTGAGGTTCTaGACCAAAGCCTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: KPAYVDSWTYSWIWMGPLLVLRF*TKAFRK
Trigger: TTTCCTGAAGGCTTTGGTCCAGAACCTCAGCACCAA...CAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp AACAAATATTTATTCAAGGTTTGCCACGAGCCAGACCCTGTGCTTGGCCTGGGCATCGAAAAAGGCTCTTaGGAAGTCGCACTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: NKYLFKVCHEPDPVLGLGIEKGS*EVALCQ
Trigger: CTGACAGAGTGCGACTTCCCAAGAGCCTTTTTCGAT...GCCCAGGCCAAGCACAGGGTCTGGCTCGTGGCAAACCTTGAATAAATATTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CCA 90 bp AAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGATCGAAAAAGGCTCTTaGGAAGTCGCACTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: KPAYVDSWTYSWIWMGPLIEKGS*EVALCQ
Trigger: CTGACAGAGTGCGACTTCCCAAGAGCCTTTTTCGAT...CAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp AGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGTGTGGTGCTCTGACTTaGGAGGTAAAGGATGGTGAA +
Preference number: 4 (lower is better)
Translates to: SLANLLTWTLGPIVGSGWCGALT*EVKDGE
Trigger: TTCACCATCCTTTACCTCCCAAGTCAGAGCACCACA...CCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp TCGGAACCTGAGAGGGCTCCAGAGAGAAATAGAAGTCTTCTGCAGTGTTGGTGCGTGCTAAGAAGCTCCTaGATCACCTCTGCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: SEPERAPERNRSLLQCWCVLRSS*ITSASF
Trigger: AAAACTTGCAGAGGTGATCCAGGAGCTTCTTAGCAC...GCACCAACACTGCAGAAGACTTCTATTTCTCTCTGGAGCCCTCTCAGGTTCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR TCA 90 bp GCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGATGCCACACCTTGCAAGGAGTTaGAAAGTGCAAAGATGTAGA +
Preference number: 4 (lower is better)
Translates to: AYVDSWTYSWIWMGPLMPHLARS*KVQRCR
Trigger: TCTACATCTTTGCACTTTTCAACTCCTTGCAAGGTG...TGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp GACTATAGGAACTTTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATGTCGTACATGTTGTTaGTCCCCAGGCAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: DYRNFRALQTCLRGLLDLCRTCC*SPGRCF
Trigger: GAAACACCTGCCTGGGGAGCAACAACATGTACGACA...TAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCTATAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp GAAGTAGCCGTGGACGGTGATATAGAGGGCGTACATGGTTGTCCCTTCACGGAATTTAGCCAGTATCTCTaGAAGTTTTCCACATTGCAG +
Preference number: 4 (lower is better)
Translates to: EVAVDGDIEGVHGCPFTEFSQYL*KFSTLQ
Trigger: CTGCAATGTGGAAAACTTGCAGAGATACTGGCTAAA...TTCCGTGAAGGGACAACCATGTACGCCCTCTATATCACCGTCCACGGCTACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR GCA 90 bp CCTCGGAACCTGAGAGGGCTCCAGAGAGAAATAGAAGTCTTCTGCAGTGTTGGTGAAATAGAAGTCTTCTaGAGTGTTGGTGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PRNLRGLQREIEVFCSVGEIEVF*SVGAEV
Trigger: AACCTCAGCACCAACACTGCAGAAGACTTCTATTTC...ACCAACACTGCAGAAGACTTCTATTTCTCTCTGGAGCCCTCTCAGGTTCCGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR GCA 90 bp TTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGGGAACTTTAGAGCCTTaGAAACCTGCTTACGTGGAC +
Preference number: 4 (lower is better)
Translates to: LEPCKPAYVDSWTYSWIWGTLEP*KPAYVD
Trigger: GTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCC...CCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp TTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGCTTGAAGAGAGTCCCTaGACCAATGTCCAGAATGGT +
Preference number: 4 (lower is better)
Translates to: LEPCKPAYVDSWTYSWIWLEESP*TNVQNG
Trigger: ACCATTCTGGACATTGGTCCAGGGACTCTCTTCAAG...CCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR TCA 90 bp AAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGCACCTTGCAAGGAGTTaGAAAGTGCAAAGATGTAGA +
Preference number: 4 (lower is better)
Translates to: KPAYVDSWTYSWIWMGPLHLARS*KVQRCR
Trigger: TCTACATCTTTGCACTTTTCAACTCCTTGCAAGGTG...CAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR GCA 90 bp AAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGCAGATGAAGACACCTTaGAAGGAGTTGAAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: KPAYVDSWTYSWIWMGPLQMKTP*KELKSA
Trigger: TGCACTTTTCAACTCCTTGCAAGGTGTCTTCATCTG...CAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp GACTATAGGAACTTTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTAGCTTACGTGGACTCTTaGACCTATAGTTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: DYRNFRALQTCLRGLLDLAYVDS*TYSWIW
Trigger: CCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC...TAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCTATAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CCA 90 bp GACTATAGGAACTTTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTAGCAAACCTGCTTACGTaGACTCTTGGACCTATAGTT +
Preference number: 4 (lower is better)
Translates to: DYRNFRALQTCLRGLLDLANLLT*TLGPIV
Trigger: AACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGC...TAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCTATAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp ATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGTGGGCGTCGCCATCCTaGGCCAGCCTTGCCCACGCC +
Preference number: 5 (lower is better)
Translates to: MGPLMPRGPTWSHPLPPQWASPS*ASLAHA
Trigger: GGCGTGGGCAAGGCTGGCCAAGGATGGCGACGCCCA...CTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp ACGTGCAGGGCTGCCAGCACTCTGAACACGGGGGTCTCTTCCAGGAGGGTGGGCTTCTTCCCCCGCTCCTaGACCGCTGTAGCACGGGAC +
Preference number: 5 (lower is better)
Translates to: TCRAASTLNTGVSSRRVGFFPRS*TAVARD
Trigger: GTCCCGTGCTACAGCGGTCAAGGAGCGGGGGAAGAA...GCCCACCCTCCTGGAAGAGACCCCCGTGTTCAGAGTGCTGGCAGCCCTGCACGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp GGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACACACTTTCTTCCCCCGCTCCTaGACCGCTGTAGCACGGGAC +
Preference number: 5 (lower is better)
Translates to: GAQVLVAMPSLCSGAPHTFFPRS*TAVARD
Trigger: GTCCCGTGCTACAGCGGTCAAGGAGCGGGGGAAGAA...AGTGTGTGGGGCCCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp TGGATCTGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCGAGCCGGGGGCCCTaGAAGAGAGTCCCTGGACCA +
Preference number: 5 (lower is better)
Translates to: WIWMGPLMPRGPTWSHPLPSRGP*KRVPGP
Trigger: TGGTCCAGGGACTCTCTTCAAGGGCCCCCGGCTCGG...GAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCAGATCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp GGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACACACTGGGGCATCTTCTGACTaGAACCTCTCCCGGGAAAGC +
Preference number: 5 (lower is better)
Translates to: GAQVLVAMPSLCSGAPHTGASSD*NLSRES
Trigger: GCTTTCCCGGGAGAGGTTCAAGTCAGAAGATGCCCC...AGTGTGTGGGGCCCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333493.9
CDS-3UTR CAA 90 bp AGGCCCAACGGGGTGAAGATGGCCAACCCCCATGTCACACCCACCAGGCTCGAGAGAGGGCGTACATGGTaGTCCCTTCACGGAACCAGC +
Preference number: 5 (lower is better)
Translates to: RPNGVKMANPHVTPTRLERGRTW*SLHGTS
Trigger: GCTGGTTCCGTGAAGGGACAACCATGTACGCCCTCT...CTCGAGCCTGGTGGGTGTGACATGGGGGTTGGCCATCTTCACCCCGTTGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS TCA 90 bp CGAAAAAGGTCAGGTGGTCACAGCAGCACACGGTCCCCTCAGGTCTaGCCTCCGTGGAGCAGCCCTCAGAAGACCAGTCTCCAGTGGTCC +
Preference number: 5 (lower is better)
Translates to: RKRSGGHSSTRSPQV*PPWSSPQKTSLQWS
Trigger: GGACCACTGGAGACTGGTCTTCTGAGGGCTGCTCCACGGAGGTCAGACCTGAGGGGACCGTGTGCTGCTGTGACCACCTGACCTTTTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
ENST00000569977.1
CDS-3UTR CAA 90 bp TCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGCCCCAACTCTGTCAGGGGGCTaGTCCTCGTCCTTCATCACC +
Preference number: 5 (lower is better)
Translates to: SLGAQVLVAMPSLCSGAPTLSGG*SSSFIT
Trigger: GGTGATGAAGGACGAGGACAAGCCCCCTGACAGAGT...TGGGGCCCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp TGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCACTCTGTCAGGGGGCTaGTCCTCGTCCTTCATCACC +
Preference number: 5 (lower is better)
Translates to: WMGPLMPRGPTWSHPLPPTLSGG*SSSFIT
Trigger: GGTGATGAAGGACGAGGACAAGCCCCCTGACAGAGT...GGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp TGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACACACTGAATGAGTGGGAGCACAAACCCACCAGGCGATaGTTCAACACGCCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: WQCPASAQGPHTLNEWEHKPTRR*FNTPLP
Trigger: TGGCAGCGGCGTGTTGAACAATCGCCTGGTGGGTTT...GTGCTCCCACTCATTCAGTGTGTGGGGCCCCTGAGCAGAGGCTGGGCATTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp GGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGCCGATCGAAAAAGGCTCTaGGGAAGTCGCACTCTGTCA +
Preference number: 5 (lower is better)
Translates to: GTSDATWSNLVPSSPSPADRKRL*GSRTLS
Trigger: TGACAGAGTGCGACTTCCCAAGAGCCTTTTTCGATC...GGCTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp ATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGAGAGGCTCAGCCAGCTaGGTGACATGCATTTGTCCC +
Preference number: 5 (lower is better)
Translates to: MGPLMPRGPTWSHPLPPQRGSAS*VTCICP
Trigger: GGGACAAATGCATGTCACCAAGCTGGCTGAGCCTCT...CTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp TTCTACCTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGGTGACTGTCACTCTTaGCTGGCAGGGGGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: FYLYDDSRSEVGPPTWQSGDCHS*LAGGLR
Trigger: CCTGAGACCCCCTGCCAGCAAAGAGTGACAGTCACC...TGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAGGTAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp TGGATCTGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCGGTGACTGTCACTCTTaGCTGGCAGGGGGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: WIWMGPLMPRGPTWSHPLGDCHS*LAGGLR
Trigger: CCTGAGACCCCCTGCCAGCAAAGAGTGACAGTCACC...GAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCAGATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp CCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGAGCCAGACCCTGTGCTaGGCCTGGGCTGGAACAGTA +
Preference number: 5 (lower is better)
Translates to: PCSLGAQVLVAMPSLCSGSQTLC*AWAGTV
Trigger: TACTGTTCCAGCCCAGGCCAAGCACAGGGTCTGGCT...CCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp AAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGTGGGCGTCGCCATCCTaGGCCAGCCTTGCCCACGCC +
Preference number: 5 (lower is better)
Translates to: KPAYVDSWTYSWIWMGPLWASPS*ASLAHA
Trigger: GGCGTGGGCAAGGCTGGCCAAGGATGGCGACGCCCA...CAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp TCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGCCCCAAAGATGTCGTACATGTaGTTGCTCCCCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: SLGAQVLVAMPSLCSGAPKMSYM*LLPRQV
Trigger: CACCTGCCTGGGGAGCAACAACATGTACGACATCTT...TGGGGCCCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp CTCTACGATGACAGCAGGTCAGAGGTCGGGCCACCCACGTGGCAGTCAGAGTCATGCAAGTTTTCCACATaGCAGGAGTCGCTGCCCGAC +
Preference number: 5 (lower is better)
Translates to: LYDDSRSEVGPPTWQSESCKFST*QESLPD
Trigger: GTCGGGCAGCGACTCCTGCAATGTGGAAAACTTGCA...TGACTCTGACTGCCACGTGGGTGGCCCGACCTCTGACCTGCTGTCATCGTAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp CGGCCAAGCGGACCACAGACCTGTTGCCTGGCAGGGATCGAAAAAGGCTCTTGGTGCAAGTTTTCCACATaGCAGGAGTCGCTGCCCGAC +
Preference number: 5 (lower is better)
Translates to: RPSGPQTCCLAGIEKGSWCKFST*QESLPD
Trigger: GTCGGGCAGCGACTCCTGCAATGTGGAAAACTTGCA...CCAAGAGCCTTTTTCGATCCCTGCCAGGCAACAGGTCTGTGGTCCGCTTGGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR CAA 90 bp CCCAGGTCCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGACTCTGTCAGGGGGCTaGTCCTCGTCCTTCATCACC +
Preference number: 5 (lower is better)
Translates to: PRSLFSRSSGPSGNAQPLTLSGG*SSSFIT
Trigger: GGTGATGAAGGACGAGGACAAGCCCCCTGACAGAGT...CAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGGACCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp TGGATCTGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCGGACCACAGACCTGTaGCCTGGCAGGGATCGAAAA +
Preference number: 5 (lower is better)
Translates to: WIWMGPLMPRGPTWSHPLRTTDL*PGRDRK
Trigger: TTTTCGATCCCTGCCAGGCAACAGGTCTGTGGTCCG...GAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCAGATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp GTGCTTGGCCTGGGCTGGAACAGTAAGCGAGGCCACCCAGGTCCTTGTTCTCTACGGACCACAGACCTGTaGCCTGGCAGGGATCGAAAA +
Preference number: 5 (lower is better)
Translates to: VLGLGWNSKRGHPGPCSLRTTDL*PGRDRK
Trigger: TTTTCGATCCCTGCCAGGCAACAGGTCTGTGGTCCG...TAGAGAACAAGGACCTGGGTGGCCTCGCTTACTGTTCCAGCCCAGGCCAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp GCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCCCGAGCCGGGGGCCCTaGAAGAGAGTCCCTGGACCA +
Preference number: 5 (lower is better)
Translates to: ANLLTWTLGPIVGSGWDLPSRGP*KRVPGP
Trigger: TGGTCCAGGGACTCTCTTCAAGGGCCCCCGGCTCGG...GAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS CCA 90 bp ATAATGGTGAAGGCCAGGAAGATCATGGAGACCCCACAGCCCGCCTaGGAGATGCGTGTGAGGATATGCACCGTGGACTGGTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: IMVKARKIMETPQPA*EMRVRICTVDWSKV
Trigger: CACCTTGGACCAGTCCACGGTGCATATCCTCACACGCATCTCCCAGGCGGGCTGTGGGGTCTCCATGATCTTCCTGGCCTTCACCATTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
ENST00000569977.1
CDS CCA 90 bp AAGAAGGCCAGATTCAGGAGGAACAGGCTGCCACCCAGGGCCACGTaGATCTTTGGGGCATCTTCTGACTTGAACCTCTCCCGGGAAAGC +
Preference number: 5 (lower is better)
Translates to: KKARFRRNRLPPRAT*IFGASSDLNLSRES
Trigger: GCTTTCCCGGGAGAGGTTCAAGTCAGAAGATGCCCCAAAGATCCACGTGGCCCTGGGTGGCAGCCTGTTCCTCCTGAATCTGGCCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS-3UTR CAA 90 bp ATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGATGTCGTACATGTTGTaGCTCCCCAGGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: MGPLMPRGPTWSHPLPPQMSYML*LPRQVF
Trigger: AAACACCTGCCTGGGGAGCAACAACATGTACGACAT...CTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp TCACTCTTTGCTGGCAGGGGGTCTCAGGACTATAGGAACTTTAGAGCCTTGCAACCGAGCCGGGGGCCCTaGAAGAGAGTCCCTGGACCA +
Preference number: 5 (lower is better)
Translates to: SLFAGRGSQDYRNFRALQPSRGP*KRVPGP
Trigger: TGGTCCAGGGACTCTCTTCAAGGGCCCCCGGCTCGG...TTGCAAGGCTCTAAAGTTCCTATAGTCCTGAGACCCCCTGCCAGCAAAGAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp AAGGTTACAGGCAGCCAGAAGGGGAGTTGTGGGAGGCCAGTGACAAGGAGGAGGAGAGGCTCAGCCAGCTaGGTGACATGCATTTGTCCC +
Preference number: 5 (lower is better)
Translates to: KVTGSQKGSCGRPVTRRRRGSAS*VTCICP
Trigger: GGGACAAATGCATGTCACCAAGCTGGCTGAGCCTCT...CCTCCTCCTTGTCACTGGCCTCCCACAACTCCCCTTCTGGCTGCCTGTAACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp CCCAGGTCCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGACAGACTCTCCTCCCTaGCTGAGACCAGAAGGTGAG +
Preference number: 5 (lower is better)
Translates to: PRSLFSRSSGPSGNAQPLTDSPP*LRPEGE
Trigger: CTCACCTTCTGGTCTCAGCAAGGGAGGAGAGTCTGT...CAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGGACCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp TCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGGGCCCCACCACTCAGTGGTTCTTaGAAATGCAGTGTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: SLGAQVLVAMPSLCSGAPPLSGS*KCSVPG
Trigger: TCCAGGGACACTGCATTTCAAAGAACCACTGAGTGG...TGGGGCCCCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp ATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGGTGCTGAGCCCCAGATaGTTTGCTTTCTACCTCTAC +
Preference number: 5 (lower is better)
Translates to: MGPLMPRGPTWSHPLPPQVLSPR*FAFYLY
Trigger: GTAGAGGTAGAAAGCAAACAATCTGGGGCTCAGCAC...CTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS GCA 90 bp GAGCACACTAGCCCTCAGGGGTACACACGTCTGCACAGGAGTGGATaGACACCTCTGGGTGCACATACCTGGTATACACATGTGCAAGGG +
Preference number: 5 (lower is better)
Translates to: EHTSPQGYTRLHRSG*TPLGAHTWYTHVQG
Trigger: CCCTTGCACATGTGTATACCAGGTATGTGCACCCAGAGGTGTGCATCCACTCCTGTGCAGACGTGTGTACCCCTGAGGGCTAGTGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565579.5
CDS CCA 90 bp AATGTCCAGAATGGTGACGGCCAAGCGGACCACAGACCTGTTGCCTaGCAGGGATCGAAAAAGGCTCTTGGGAAGTCGCACTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: NVQNGDGQADHRPVA*QGSKKALGKSHSVR
Trigger: CCTGACAGAGTGCGACTTCCCAAGAGCCTTTTTCGATCCCTGCCAGGCAACAGGTCTGTGGTCCGCTTGGCCGTCACCATTCTGGACATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000565579.5
ENST00000565902.1
ENST00000567991.5
CDS CCA 90 bp GCCCTCAGGGGTACACACGTCTGCACAGGAGTGGATGCACACCTCTaGGTGCACATACCTGGTATACACATGTGCAAGGGCATGGGTACA +
Preference number: 5 (lower is better)
Translates to: ALRGTHVCTGVDAHL*VHIPGIHMCKGMGT
Trigger: TGTACCCATGCCCTTGCACATGTGTATACCAGGTATGTGCACCCAGAGGTGTGCATCCACTCCTGTGCAGACGTGTGTACCCCTGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565579.5
CDS-3UTR CAA 90 bp AGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGCATCCTTGGCCAGCCTaGCCCACGCCAGGAGCTCTG +
Preference number: 5 (lower is better)
Translates to: SLANLLTWTLGPIVGSGWHPWPA*PTPGAL
Trigger: CAGAGCTCCTGGCGTGGGCAAGGCTGGCCAAGGATG...CCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS-3UTR CAA 90 bp TCTGCGTCAAACCTTCCTTCATCAGATGGGCCTCGTAGTTTAGCCAGTATCTGGCATCCTTGGCCAGCCTaGCCCACGCCAGGAGCTCTG +
Preference number: 5 (lower is better)
Translates to: SASNLPSSDGPRSLASIWHPWPA*PTPGAL
Trigger: CAGAGCTCCTGGCGTGGGCAAGGCTGGCCAAGGATG...CCAGATACTGGCTAAACTACGAGGCCCATCTGATGAAGGAAGGTTTGACGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR CAA 90 bp TGGATCTGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCAAGATGTCGTACATGTaGTTGCTCCCCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: WIWMGPLMPRGPTWSHPLKMSYM*LLPRQV
Trigger: CACCTGCCTGGGGAGCAACAACATGTACGACATCTT...GAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCAGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp ACGGCCAAGCGGACCACAGACCTGTTGCCTGGCAGGGATCGAAAAAGGCTCTTGAAGATGTCGTACATGTaGTTGCTCCCCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: TAKRTTDLLPGRDRKRLLKMSYM*LLPRQV
Trigger: CACCTGCCTGGGGAGCAACAACATGTACGACATCTT...CAAGAGCCTTTTTCGATCCCTGCCAGGCAACAGGTCTGTGGTCCGCTTGGCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR CAA 90 bp TCCTTCCAGGGCTATGCCAGCAACAGACTCTCCTCCCTTGCTGAGACCAGAAGGTGCAAGTTTTCCACATaGCAGGAGTCGCTGCCCGAC +
Preference number: 5 (lower is better)
Translates to: SFQGYASNRLSSLAETRRCKFST*QESLPD
Trigger: GTCGGGCAGCGACTCCTGCAATGTGGAAAACTTGCA...CCTTCTGGTCTCAGCAAGGGAGGAGAGTCTGTTGCTGGCATAGCCCTGGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp TGGGAAGTCGCACTCTGTCAGGGGGCTTGTCCTCGTCCTTCATCACCTGCCTCGGATCGAAAAAGGCTCTaGGGAAGTCGCACTCTGTCA +
Preference number: 5 (lower is better)
Translates to: WEVALCQGACPRPSSPASDRKRL*GSRTLS
Trigger: TGACAGAGTGCGACTTCCCAAGAGCCTTTTTCGATC...CGAGGCAGGTGATGAAGGACGAGGACAAGCCCCCTGACAGAGTGCGACTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR CAA 90 bp TGTACAGAGAAGGAAACTGAGGGAGTACAGAGAGAGGCACGGAGCTGCCCAAGGCGGACCACAGACCTGTaGCCTGGCAGGGATCGAAAA +
Preference number: 5 (lower is better)
Translates to: CTEKETEGVQREARSCPRRTTDL*PGRDRK
Trigger: TTTTCGATCCCTGCCAGGCAACAGGTCTGTGGTCCG...CCTTGGGCAGCTCCGTGCCTCTCTCTGTACTCCCTCAGTTTCCTTCTCTGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp GGAGCACCCCCAGGTGTGCTGAGCCCCAGATTGTTTGCTTTCTACCTCTACGATAAACCCACCAGGCGATaGTTCAACACGCCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GAPPGVLSPRLFAFYLYDKPTRR*FNTPLP
Trigger: TGGCAGCGGCGTGTTGAACAATCGCCTGGTGGGTTT...ATCGTAGAGGTAGAAAGCAAACAATCTGGGGCTCAGCACACCTGGGGGTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp TGGATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCGCAGATGAAGACACCTaGCAAGGAGTTGAAAAGTGC +
Preference number: 5 (lower is better)
Translates to: WMGPLMPRGPTWSHPLPPADEDT*QGVEKC
Trigger: GCACTTTTCAACTCCTTGCAAGGTGTCTTCATCTGC...GGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp ATGGGACCTCTGATGCCACGTGGTCCAACCTGGTCCCATCCTCTCCCTCCCCAGAGGAACTTTAGAGCCTaGCAAACCTGCTTACGTGGA +
Preference number: 5 (lower is better)
Translates to: MGPLMPRGPTWSHPLPPQRNFRA*QTCLRG
Trigger: TCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCT...CTGGGGAGGGAGAGGATGGGACCAGGTTGGACCACGTGGCATCAGAGGTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS CCA 90 bp CTTAACCTTGGAGCTTCCCTGAGTCCTCACCTTGAAGAGAGTCCCTaGACCAATGTCCAGAATGGTGACGGCCAAGCGGACCACAGACCT +
Preference number: 5 (lower is better)
Translates to: LNLGASLSPHLEESP*TNVQNGDGQADHRP
Trigger: AGGTCTGTGGTCCGCTTGGCCGTCACCATTCTGGACATTGGTCCAGGGACTCTCTTCAAGGTGAGGACTCAGGGAAGCTCCAAGGTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565579.5
ENST00000565902.1
CDS-3UTR CAA 90 bp TTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGCATCCTTGGCCAGCCTaGCCCACGCCAGGAGCTCTG +
Preference number: 5 (lower is better)
Translates to: LEPCKPAYVDSWTYSWIWHPWPA*PTPGAL
Trigger: CAGAGCTCCTGGCGTGGGCAAGGCTGGCCAAGGATG...CCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS-3UTR CAA 90 bp CCCAGGTCCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGATGTCGTACATGTTGTaGCTCCCCAGGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: PRSLFSRSSGPSGNAQPLMSYML*LPRQVF
Trigger: AAACACCTGCCTGGGGAGCAACAACATGTACGACAT...CAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGGACCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp TCCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGCTCAGGAAGATGTCGTACATGTaGTTGCTCCCCAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: SLFSRSSGPSGNAQPLLRKMSYM*LLPRQV
Trigger: CACCTGCCTGGGGAGCAACAACATGTACGACATCTT...CCTGAGCAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp CATCACCTGCCTCGGAACCTGAGAGGGCTCCAGAGAGAAATAGAAGTCTTCTGCCCCGACTGCCTGCACTaGGTGAAGCACAAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: HHLPRNLRGLQREIEVFCPDCLH*VKHKAL
Trigger: CAAGGCTTTGTGCTTCACCAAGTGCAGGCAGTCGGG...GCAGAAGACTTCTATTTCTCTCTGGAGCCCTCTCAGGTTCCGAGGCAGGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR CAA 90 bp AGTATCTGGGCAGCACAAAGAGGAGCCTCTGAACAGCTCTGGGGTGCTAAGAAGACTCTGTCAGGGGGCTaGTCCTCGTCCTTCATCACC +
Preference number: 5 (lower is better)
Translates to: SIWAAQRGASEQLWGAKKTLSGG*SSSFIT
Trigger: GGTGATGAAGGACGAGGACAAGCCCCCTGACAGAGT...CTTCTTAGCACCCCAGAGCTGTTCAGAGGCTCCTCTTTGTGCTGCCCAGATACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR CAA 90 bp CCCAGGTCCTTGTTCTCTAGGAGCTCAGGTCCTAGTGGCAATGCCCAGCCTCTGGATCGAAAAAGGCTCTaGGGAAGTCGCACTCTGTCA +
Preference number: 5 (lower is better)
Translates to: PRSLFSRSSGPSGNAQPLDRKRL*GSRTLS
Trigger: TGACAGAGTGCGACTTCCCAAGAGCCTTTTTCGATC...CAGAGGCTGGGCATTGCCACTAGGACCTGAGCTCCTAGAGAACAAGGACCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp GGGGGTTTGCCCAAGGTAGCTCACCCACTCAGTGGTTCTTTGAAATGCAGTGTCAGGCCACCCAGGTCCTaGTTCTCTAGGAGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: GGLPKVAHPLSGSLKCSVRPPRS*FSRSSG
Trigger: ACCTGAGCTCCTAGAGAACAAGGACCTGGGTGGCCT...GACACTGCATTTCAAAGAACCACTGAGTGGGTGAGCTACCTTGGGCAAACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp GACCACCATGCCAAAGAGGAAGGTGATGAGGAAGTAGCCGTGGACGGTGATATAAGCCAGACCCTGTGCTaGGCCTGGGCTGGAACAGTA +
Preference number: 5 (lower is better)
Translates to: DHHAKEEGDEEVAVDGDISQTLC*AWAGTV
Trigger: TACTGTTCCAGCCCAGGCCAAGCACAGGGTCTGGCT...TATATCACCGTCCACGGCTACTTCCTCATCACCTTCCTCTTTGGCATGGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS TCA 90 bp GTCGCTGGTGAGAGAAGACGATCTCCAGAGGCTCAGCCAGCTTGGTaGCATGCATTTGTCCCACACTCAAACCCACCAGGCGATTGTTCA +
Preference number: 5 (lower is better)
Translates to: VAGERRRSPEAQPAW*HAFVPHSNPPGDCS
Trigger: TGAACAATCGCCTGGTGGGTTTGAGTGTGGGACAAATGCATGTCACCAAGCTGGCTGAGCCTCTGGAGATCGTCTTCTCTCACCAGCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS TCA 90 bp GAACAGGCTGCCACCCAGGGCCACGTGGATCTTTGGGGCATCTTCTaGCTTGAACCTCTCCCGGGAAAGCCTCAGAAAGGCATAAAGAAT +
Preference number: 5 (lower is better)
Translates to: EQAATQGHVDLWGIF*LEPLPGKPQKGIKN
Trigger: ATTCTTTATGCCTTTCTGAGGCTTTCCCGGGAGAGGTTCAAGTCAGAAGATGCCCCAAAGATCCACGTGGCCCTGGGTGGCAGCCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS GCA 90 bp TCAGGGGTACACACGTCTGCACAGGAGTGGATGCACACCTCTGGGTaGACATACCTGGTATACACATGTGCAAGGGCATGGGTACACTTG +
Preference number: 5 (lower is better)
Translates to: SGVHTSAQEWMHTSG*TYLVYTCARAWVHL
Trigger: CAAGTGTACCCATGCCCTTGCACATGTGTATACCAGGTATGTGCACCCAGAGGTGTGCATCCACTCCTGTGCAGACGTGTGTACCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565579.5
CDS CCA 90 bp ACACGTCTGCACAGGAGTGGATGCACACCTCTGGGTGCACATACCTaGTATACACATGTGCAAGGGCATGGGTACACTTGCTCGTGTGGA +
Preference number: 5 (lower is better)
Translates to: TRLHRSGCTPLGAHT*YTHVQGHGYTCSCG
Trigger: TCCACACGAGCAAGTGTACCCATGCCCTTGCACATGTGTATACCAGGTATGTGCACCCAGAGGTGTGCATCCACTCCTGTGCAGACGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565579.5
CDS-3UTR CAA 90 bp GCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGATGCCACCCGACTGCCTGCACTaGGTGAAGCACAAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: AYVDSWTYSWIWMGPLMPPDCLH*VKHKAL
Trigger: CAAGGCTTTGTGCTTCACCAAGTGCAGGCAGTCGGG...TGGCATCAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp CAAATATTTATTCAAGGTTTGCCACGAGCCAGACCCTGTGCTTGGCCTGGGCTGCCCGACTGCCTGCACTaGGTGAAGCACAAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: QIFIQGLPRARPCAWPGLPDCLH*VKHKAL
Trigger: CAAGGCTTTGTGCTTCACCAAGTGCAGGCAGTCGGG...CAGCCCAGGCCAAGCACAGGGTCTGGCTCGTGGCAAACCTTGAATAAATATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp GCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCAAACCCACCAGGCGATaGTTCAACACGCCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: ANLLTWTLGPIVGSGWDLKPTRR*FNTPLP
Trigger: TGGCAGCGGCGTGTTGAACAATCGCCTGGTGGGTTT...GAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp AACAAATATTTATTCAAGGTTTGCCACGAGCCAGACCCTGTGCTTGGCCTGGGCCCCGACTGCCTGCACTaGGTGAAGCACAAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: NKYLFKVCHEPDPVLGLGPDCLH*VKHKAL
Trigger: CAAGGCTTTGTGCTTCACCAAGTGCAGGCAGTCGGG...GCCCAGGCCAAGCACAGGGTCTGGCTCGTGGCAAACCTTGAATAAATATTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp AAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGGGGGCATCTTCTGACTaGAACCTCTCCCGGGAAAGC +
Preference number: 5 (lower is better)
Translates to: KPAYVDSWTYSWIWMGPLGASSD*NLSRES
Trigger: GCTTTCCCGGGAGAGGTTCAAGTCAGAAGATGCCCC...CAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS-3UTR CAA 90 bp AGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGAGAGGGCGTACATGGTaGTCCCTTCACGGAACCAGC +
Preference number: 5 (lower is better)
Translates to: SLANLLTWTLGPIVGSGWRGRTW*SLHGTS
Trigger: GCTGGTTCCGTGAAGGGACAACCATGTACGCCCTCT...CCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp GACTATAGGAACTTTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATTCTTCCCCCGCTCCTaGACCGCTGTAGCACGGGAC +
Preference number: 5 (lower is better)
Translates to: DYRNFRALQTCLRGLLDLFFPRS*TAVARD
Trigger: GTCCCGTGCTACAGCGGTCAAGGAGCGGGGGAAGAA...TAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCTATAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp GGCCGTGCCTTCCTATTCTTGAGATGCGGAGTGGGCCTGGTCCAATCTTGCAGTAGGAACTTTAGAGCCTaGCAAACCTGCTTACGTGGA +
Preference number: 5 (lower is better)
Translates to: GRAFLFLRCGVGLVQSCSRNFRA*QTCLRG
Trigger: TCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCT...ACTGCAAGATTGGACCAGGCCCACTCCGCATCTCAAGAATAGGAAGGCACGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR CAA 90 bp AGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCCAGCACTCTCCACTCAGTGGTTCTTaGAAATGCAGTGTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: SGSLKCSVPGHVQGCQHSPLSGS*KCSVPG
Trigger: TCCAGGGACACTGCATTTCAAAGAACCACTGAGTGG...AGAGTGCTGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp AGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGAGGCCACCCAGGTCCTaGTTCTCTAGGAGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: SLANLLTWTLGPIVGSGWRPPRS*FSRSSG
Trigger: ACCTGAGCTCCTAGAGAACAAGGACCTGGGTGGCCT...CCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS GCA 90 bp CGGAACCTCTGCAAGTTTTCCACATTGCAGGAGTCGCTGCCCGACTaGCTGCACTTGGTGAAGCACAAAGCCTTGTCATTCAAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: RNLCKFSTLQESLPD*LHLVKHKALSFKLK
Trigger: CTTCAACTTGAATGACAAGGCTTTGTGCTTCACCAAGTGCAGGCAGTCGGGCAGCGACTCCTGCAATGTGGAAAACTTGCAGAGGTTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450388.7
ENST00000565902.1
CDS GCA 90 bp GGAGTGGATGCACACCTCTGGGTGCACATACCTGGTATACACATGTaGAAGGGCATGGGTACACTTGCTCGTGTGGATATGATCACAGCT +
Preference number: 5 (lower is better)
Translates to: GVDAHLWVHIPGIHM*KGMGTLARVDMITA
Trigger: AGCTGTGATCATATCCACACGAGCAAGTGTACCCATGCCCTTGCACATGTGTATACCAGGTATGTGCACCCAGAGGTGTGCATCCACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565579.5
CDS CCA 90 bp TTAGCCAGTATCTGGGCAGCACAAAGAGGAGCCTCTGAACAGCTCTaGGGTGCTAAGAAGCTCCTGGATCACCTCTGCAAGTTTTCCACA +
Preference number: 5 (lower is better)
Translates to: LASIWAAQRGASEQL*GAKKLLDHLCKFST
Trigger: TGTGGAAAACTTGCAGAGGTGATCCAGGAGCTTCTTAGCACCCCAGAGCTGTTCAGAGGCTCCTCTTTGTGCTGCCCAGATACTGGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR CAA 90 bp AGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGTGCAAGTTTTCCACATaGCAGGAGTCGCTGCCCGAC +
Preference number: 5 (lower is better)
Translates to: SLANLLTWTLGPIVGSGWCKFST*QESLPD
Trigger: GTCGGGCAGCGACTCCTGCAATGTGGAAAACTTGCA...CCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp ATAGAAGTCTTCTGCAGTGTTGGTGCTGAGGTTCTGGACCAAAGCCTTCAGGAACGGACCACAGACCTGTaGCCTGGCAGGGATCGAAAA +
Preference number: 5 (lower is better)
Translates to: IEVFCSVGAEVLDQSLQERTTDL*PGRDRK
Trigger: TTTTCGATCCCTGCCAGGCAACAGGTCTGTGGTCCG...TTCCTGAAGGCTTTGGTCCAGAACCTCAGCACCAACACTGCAGAAGACTTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR CAA 90 bp TTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGAGAGGGCGTACATGGTaGTCCCTTCACGGAACCAGC +
Preference number: 5 (lower is better)
Translates to: LEPCKPAYVDSWTYSWIWRGRTW*SLHGTS
Trigger: GCTGGTTCCGTGAAGGGACAACCATGTACGCCCTCT...CCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp GGAGCACCCCCAGGTGTGCTGAGCCCCAGATTGTTTGCTTTCTACCTCTACGATGCAGATGAAGACACCTaGCAAGGAGTTGAAAAGTGC +
Preference number: 5 (lower is better)
Translates to: GAPPGVLSPRLFAFYLYDADEDT*QGVEKC
Trigger: GCACTTTTCAACTCCTTGCAAGGTGTCTTCATCTGC...ATCGTAGAGGTAGAAAGCAAACAATCTGGGGCTCAGCACACCTGGGGGTGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp AGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCCAGCACTCTAGGAACTTTAGAGCCTaGCAAACCTGCTTACGTGGA +
Preference number: 5 (lower is better)
Translates to: SGSLKCSVPGHVQGCQHSRNFRA*QTCLRG
Trigger: TCCACGTAAGCAGGTTTGCAAGGCTCTAAAGTTCCT...AGAGTGCTGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp AACAAATATTTATTCAAGGTTTGCCACGAGCCAGACCCTGTGCTTGGCCTGGGCACAGACTCTCCTCCCTaGCTGAGACCAGAAGGTGAG +
Preference number: 5 (lower is better)
Translates to: NKYLFKVCHEPDPVLGLGTDSPP*LRPEGE
Trigger: CTCACCTTCTGGTCTCAGCAAGGGAGGAGAGTCTGT...GCCCAGGCCAAGCACAGGGTCTGGCTCGTGGCAAACCTTGAATAAATATTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS GCA 90 bp GATCACCTCTGCAAGTTTTCCACATTGCAGGAGTCGCTGCCCGACTaGCTGCACTTGGTGAAGCACAAAGCCTTGTCATTCAAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: DHLCKFSTLQESLPD*LHLVKHKALSFKLK
Trigger: CTTCAACTTGAATGACAAGGCTTTGTGCTTCACCAAGTGCAGGCAGTCGGGCAGCGACTCCTGCAATGTGGAAAACTTGCAGAGGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS CCA 90 bp AGTGTGAGTCTGAAGACCATAGACTCTAGTGACAGGTGTCTGAGATaGCCACGGGCTGCATTAGAAACACTAAGAGGCTCACTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: SVSLKTIDSSDRCLR*PRAALETLRGSLPA
Trigger: AGCAGGCAGTGAGCCTCTTAGTGTTTCTAATGCAGCCCGTGGCCATCTCAGACACCTGTCACTAGAGTCTATGGTCTTCAGACTCACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565579.5
ENST00000565902.1
CDS-3UTR CAA 90 bp CAGTGGTTCTTTGAAATGCAGTGTCCCTGGACACGTGCAGGGCTGCCAGCACTCGCCTTGTCATTCAAGTaGAAGATGTCGTACATGTTG +
Preference number: 5 (lower is better)
Translates to: QWFFEMQCPWTRAGLPALALSFK*KMSYML
Trigger: CAACATGTACGACATCTTCAACTTGAATGACAAGGC...GAGTGCTGGCAGCCCTGCACGTGTCCAGGGACACTGCATTTCAAAGAACCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000567991.5
CDS-3UTR CAA 90 bp TTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGAGAGGCTCAGCCAGCTaGGTGACATGCATTTGTCCC +
Preference number: 5 (lower is better)
Translates to: LEPCKPAYVDSWTYSWIWRGSAS*VTCICP
Trigger: GGGACAAATGCATGTCACCAAGCTGGCTGAGCCTCT...CCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp GACCACCATGCCAAAGAGGAAGGTGATGAGGAAGTAGCCGTGGACGGTGATATAGTGCTGAGCCCCAGATaGTTTGCTTTCTACCTCTAC +
Preference number: 5 (lower is better)
Translates to: DHHAKEEGDEEVAVDGDIVLSPR*FAFYLY
Trigger: GTAGAGGTAGAAAGCAAACAATCTGGGGCTCAGCAC...TATATCACCGTCCACGGCTACTTCCTCATCACCTTCCTCTTTGGCATGGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS TCA 90 bp CACATAGACAAGCCAAAGGGCACTCATGTGTGGGGGTCAAACATCTaGGAGCGTGTGACCAGTGTGAGTCTGAAGACCATAGACTCTAGT +
Preference number: 5 (lower is better)
Translates to: HIDKPKGTHVWGSNI*ERVTSVSLKTIDSS
Trigger: ACTAGAGTCTATGGTCTTCAGACTCACACTGGTCACACGCTCTCAGATGTTTGACCCCCACACATGAGTGCCCTTTGGCTTGTCTATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565579.5
ENST00000565902.1
CDS GCA 90 bp CAGTATCTCTGCAAGTTTTCCACATTGCAGGAGTCGCTGCCCGACTaGCTGCACTTGGTGAAGCACAAAGCCTTGTCATTCAAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: QYLCKFSTLQESLPD*LHLVKHKALSFKLK
Trigger: CTTCAACTTGAATGACAAGGCTTTGTGCTTCACCAAGTGCAGGCAGTCGGGCAGCGACTCCTGCAATGTGGAAAACTTGCAGAGATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000565579.5
ENST00000567991.5
CDS-3UTR CAA 90 bp AGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGATGTCGTACATGTTGTaGCTCCCCAGGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: SLANLLTWTLGPIVGSGWMSYML*LPRQVF
Trigger: AAACACCTGCCTGGGGAGCAACAACATGTACGACAT...CCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp TGTTCACCTTCTGCGTCAAACCTTCCTTCATCAGATGGGCCTCGTAGTTTAGCCATGTCGTACATGTTGTaGCTCCCCAGGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: CSPSASNLPSSDGPRSLAMSYML*LPRQVF
Trigger: AAACACCTGCCTGGGGAGCAACAACATGTACGACAT...GGCTAAACTACGAGGCCCATCTGATGAAGGAAGGTTTGACGCAGAAGGTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS-3UTR CAA 90 bp AGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGATCGAAAAAGGCTCTaGGGAAGTCGCACTCTGTCA +
Preference number: 5 (lower is better)
Translates to: SLANLLTWTLGPIVGSGWDRKRL*GSRTLS
Trigger: TGACAGAGTGCGACTTCCCAAGAGCCTTTTTCGATC...CCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp GACCACCATGCCAAAGAGGAAGGTGATGAGGAAGTAGCCGTGGACGGTGATATAGCAGATGAAGACACCTaGCAAGGAGTTGAAAAGTGC +
Preference number: 5 (lower is better)
Translates to: DHHAKEEGDEEVAVDGDIADEDT*QGVEKC
Trigger: GCACTTTTCAACTCCTTGCAAGGTGTCTTCATCTGC...TATATCACCGTCCACGGCTACTTCCTCATCACCTTCCTCTTTGGCATGGTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567991.5
CDS-3UTR CAA 90 bp TCAGATGGGCCTCGTAGTTTAGCCAGTATCTGGGCAGCACAAAGAGGAGCCTCTGCCTTGTCATTCAAGTaGAAGATGTCGTACATGTTG +
Preference number: 5 (lower is better)
Translates to: SDGPRSLASIWAAQRGASALSFK*KMSYML
Trigger: CAACATGTACGACATCTTCAACTTGAATGACAAGGC...AGAGGCTCCTCTTTGTGCTGCCCAGATACTGGCTAAACTACGAGGCCCATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS TCA 90 bp GTATACACATGTGCAAGGGCATGGGTACACTTGCTCGTGTGGATATaGTCACAGCTGAGTACATGGGCTTGTGCGTGCACAAGAATAGAA +
Preference number: 5 (lower is better)
Translates to: VYTCARAWVHLLVWI*SQLSTWACACTRIE
Trigger: TTCTATTCTTGTGCACGCACAAGCCCATGTACTCAGCTGTGATCATATCCACACGAGCAAGTGTACCCATGCCCTTGCACATGTGTATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565579.5
CDS GCA 90 bp ACACTTGCTCGTGTGGATATGATCACAGCTGAGTACATGGGCTTGTaGGTGCACAAGAATAGAAAAGGATGTGCATGTTTGTGCATGCAC +
Preference number: 5 (lower is better)
Translates to: TLARVDMITAEYMGL*VHKNRKGCACLCMH
Trigger: GTGCATGCACAAACATGCACATCCTTTTCTATTCTTGTGCACGCACAAGCCCATGTACTCAGCTGTGATCATATCCACACGAGCAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565579.5
CDS-3UTR CAA 90 bp AAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGATGGGACCTCTGGCCTTGTCATTCAAGTaGAAGATGTCGTACATGTTG +
Preference number: 5 (lower is better)
Translates to: KPAYVDSWTYSWIWMGPLALSFK*KMSYML
Trigger: CAACATGTACGACATCTTCAACTTGAATGACAAGGC...CAGAGGTCCCATCCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS-3UTR CAA 90 bp TTAGAGCCTTGCAAACCTGCTTACGTGGACTCTTGGACCTATAGTTGGATCTGGGCCTTGTCATTCAAGTaGAAGATGTCGTACATGTTG +
Preference number: 5 (lower is better)
Translates to: LEPCKPAYVDSWTYSWIWALSFK*KMSYML
Trigger: CAACATGTACGACATCTTCAACTTGAATGACAAGGC...CCAGATCCAACTATAGGTCCAAGAGTCCACGTAAGCAGGTTTGCAAGGCTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS TCA 72 bp TGTAGAGGCCGTAGCTGTTGGCACTCCCAGTGCCGATaGCCATCAGGGCGGGCAGGCCCCAGCCCACCAGGC +
Preference number: 6 (lower is better)
Translates to: CRGRSCWHSQCR*PSGRAGPSPPG
Trigger: GCCTGGTGGGCTGGGGCCTGCCCGCCCTGATGGTCATCGGCACTGGGAGTGCCAACAGCTACGGCCTCTACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS CAA 90 bp AGCTTGGTGACATGCATTTGTCCCACACTCAAACCCACCAGGCGATaGTTCAACACGCCGCTGCCATCTCCCAGGCCGAGCCGGGGGCCC +
Preference number: 6 (lower is better)
Translates to: SLVTCICPTLKPTRR*FNTPLPSPRPSRGP
Trigger: GGGCCCCCGGCTCGGCCTGGGAGATGGCAGCGGCGTGTTGAACAATCGCCTGGTGGGTTTGAGTGTGGGACAAATGCATGTCACCAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS TCA 72 bp TCAGGTGGTCACAGCAGCACACGGTCCCCTCAGGTCTaGCCTCCGTGGAGCAGCCCTCAGAAGACCAGTCTC +
Preference number: 6 (lower is better)
Translates to: SGGHSSTRSPQV*PPWSSPQKTSL
Trigger: GAGACTGGTCTTCTGAGGGCTGCTCCACGGAGGTCAGACCTGAGGGGACCGTGTGCTGCTGTGACCACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
ENST00000569977.1
CDS TCA 72 bp TGCTCTGTCCCCATTGGATCCCTCGGCAGGCTCCAGTaGCAGCAAACTGTGGCATGGAGCCCCCAGAGGACC +
Preference number: 6 (lower is better)
Translates to: CSVPIGSLGRLQ*QQTVAWSPQRT
Trigger: GGTCCTCTGGGGGCTCCATGCCACAGTTTGCTGTCACTGGAGCCTGCCGAGGGATCCAATGGGGACAGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565579.5
ENST00000565902.1
CDS CCA 72 bp AAGGCCAGGAAGATCATGGAGACCCCACAGCCCGCCTaGGAGATGCGTGTGAGGATATGCACCGTGGACTGG +
Preference number: 6 (lower is better)
Translates to: KARKIMETPQPA*EMRVRICTVDW
Trigger: CCAGTCCACGGTGCATATCCTCACACGCATCTCCCAGGCGGGCTGTGGGGTCTCCATGATCTTCCTGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
ENST00000569977.1
CDS TCA 72 bp ACACAGGTGAGGGTCATGTTAGGGGGCGGTCGCTGGTaGGAGAAGACGATCTCCAGAGGCTCAGCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: TQVRVMLGGGRW*EKTISRGSASL
Trigger: CAAGCTGGCTGAGCCTCTGGAGATCGTCTTCTCTCACCAGCGACCGCCCCCTAACATGACCCTCACCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS TCA 72 bp GCCACCCAGGGCCACGTGGATCTTTGGGGCATCTTCTaGCTTGAACCTCTCCCGGGAAAGCCTCAGAAAGGC +
Preference number: 6 (lower is better)
Translates to: ATQGHVDLWGIF*LEPLPGKPQKG
Trigger: GCCTTTCTGAGGCTTTCCCGGGAGAGGTTCAAGTCAGAAGATGCCCCAAAGATCCACGTGGCCCTGGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS CAA 90 bp GGACCAATGTCCAGAATGGTGACGGCCAAGCGGACCACAGACCTGTaGCCTGGCAGGGATCGAAAAAGGCTCTTGGGAAGTCGCACTCTG +
Preference number: 6 (lower is better)
Translates to: GPMSRMVTAKRTTDL*PGRDRKRLLGSRTL
Trigger: CAGAGTGCGACTTCCCAAGAGCCTTTTTCGATCCCTGCCAGGCAACAGGTCTGTGGTCCGCTTGGCCGTCACCATTCTGGACATTGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000565579.5
ENST00000565902.1
ENST00000567991.5
CDS CCA 72 bp AATGGTGACGGCCAAGCGGACCACAGACCTGTTGCCTaGCAGGGATCGAAAAAGGCTCTTGGGAAGTCGCAC +
Preference number: 6 (lower is better)
Translates to: NGDGQADHRPVA*QGSKKALGKSH
Trigger: GTGCGACTTCCCAAGAGCCTTTTTCGATCCCTGCCAGGCAACAGGTCTGTGGTCCGCTTGGCCGTCACCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000565579.5
ENST00000565902.1
ENST00000567991.5
CDS CCA 72 bp ATAGCTCCAGAGAGGTGCGGTTCTCCCTATCACGGATaGTGTAGAGGCCGTAGCTGTTGGCACTCCCAGTGC +
Preference number: 6 (lower is better)
Translates to: IAPERCGSPYHG*CRGRSCWHSQC
Trigger: GCACTGGGAGTGCCAACAGCTACGGCCTCTACACCATCCGTGATAGGGAGAACCGCACCTCTCTGGAGCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
ENST00000569977.1
CDS CAA 72 bp ACATGCATTTGTCCCACACTCAAACCCACCAGGCGATaGTTCAACACGCCGCTGCCATCTCCCAGGCCGAGC +
Preference number: 6 (lower is better)
Translates to: TCICPTLKPTRR*FNTPLPSPRPS
Trigger: GCTCGGCCTGGGAGATGGCAGCGGCGTGTTGAACAATCGCCTGGTGGGTTTGAGTGTGGGACAAATGCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS CAA 72 bp CATCACCTGCCTCGGAACCTCTGCAAGTTTTCCACATaGCAGGAGTCGCTGCCCGACTGCCTGCACTTGGTG +
Preference number: 6 (lower is better)
Translates to: HHLPRNLCKFST*QESLPDCLHLV
Trigger: CACCAAGTGCAGGCAGTCGGGCAGCGACTCCTGCAATGTGGAAAACTTGCAGAGGTTCCGAGGCAGGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450388.7
ENST00000565902.1
CDS CCA 72 bp AGATTCAGGAGGAACAGGCTGCCACCCAGGGCCACGTaGATCTTTGGGGCATCTTCTGACTTGAACCTCTCC +
Preference number: 6 (lower is better)
Translates to: RFRRNRLPPRAT*IFGASSDLNLS
Trigger: GGAGAGGTTCAAGTCAGAAGATGCCCCAAAGATCCACGTGGCCCTGGGTGGCAGCCTGTTCCTCCTGAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS CAA 72 bp TCCAGAATGGTGACGGCCAAGCGGACCACAGACCTGTaGCCTGGCAGGGATCGAAAAAGGCTCTTGGGAAGT +
Preference number: 6 (lower is better)
Translates to: SRMVTAKRTTDL*PGRDRKRLLGS
Trigger: ACTTCCCAAGAGCCTTTTTCGATCCCTGCCAGGCAACAGGTCTGTGGTCCGCTTGGCCGTCACCATTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000565579.5
ENST00000565902.1
ENST00000567991.5
CDS CAA 72 bp AAAAGGCTCTTGGGAAGTCGCACTCTGTCAGGGGGCTaGTCCTCGTCCTTCATCACCTGCCTCGGAACCTCT +
Preference number: 6 (lower is better)
Translates to: KRLLGSRTLSGG*SSSFITCLGTS
Trigger: AGAGGTTCCGAGGCAGGTGATGAAGGACGAGGACAAGCCCCCTGACAGAGTGCGACTTCCCAAGAGCCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450388.7
ENST00000565902.1
CDS CAA 72 bp GAAACACTAAGAGGCTCACTGCCTGCTCTGTCCCCATaGGATCCCTCGGCAGGCTCCAGTGACAGCAAACTG +
Preference number: 6 (lower is better)
Translates to: ETLRGSLPALSP*DPSAGSSDSKL
Trigger: CAGTTTGCTGTCACTGGAGCCTGCCGAGGGATCCAATGGGGACAGAGCAGGCAGTGAGCCTCTTAGTGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565579.5
ENST00000565902.1
CDS CAA 90 bp GCTGCATTAGAAACACTAAGAGGCTCACTGCCTGCTCTGTCCCCATaGGATCCCTCGGCAGGCTCCAGTGACAGCAAACTGTGGCATGGA +
Preference number: 6 (lower is better)
Translates to: AALETLRGSLPALSP*DPSAGSSDSKLWHG
Trigger: TCCATGCCACAGTTTGCTGTCACTGGAGCCTGCCGAGGGATCCAATGGGGACAGAGCAGGCAGTGAGCCTCTTAGTGTTTCTAATGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565579.5
ENST00000565902.1
CDS TCA 72 bp GAGAGAAGACGATCTCCAGAGGCTCAGCCAGCTTGGTaGCATGCATTTGTCCCACACTCAAACCCACCAGGC +
Preference number: 6 (lower is better)
Translates to: ERRRSPEAQPAW*HAFVPHSNPPG
Trigger: GCCTGGTGGGTTTGAGTGTGGGACAAATGCATGTCACCAAGCTGGCTGAGCCTCTGGAGATCGTCTTCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS GCA 72 bp CACACGTCTGCACAGGAGTGGATGCACACCTCTGGGTaGACATACCTGGTATACACATGTGCAAGGGCATGG +
Preference number: 6 (lower is better)
Translates to: HTSAQEWMHTSG*TYLVYTCARAW
Trigger: CCATGCCCTTGCACATGTGTATACCAGGTATGTGCACCCAGAGGTGTGCATCCACTCCTGTGCAGACGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565579.5
CDS GCA 72 bp AGCCCTCAGGGGTACACACGTCTGCACAGGAGTGGATaGACACCTCTGGGTGCACATACCTGGTATACACAT +
Preference number: 6 (lower is better)
Translates to: SPQGYTRLHRSG*TPLGAHTWYTH
Trigger: ATGTGTATACCAGGTATGTGCACCCAGAGGTGTGCATCCACTCCTGTGCAGACGTGTGTACCCCTGAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565579.5
CDS CCA 72 bp GGTACACACGTCTGCACAGGAGTGGATGCACACCTCTaGGTGCACATACCTGGTATACACATGTGCAAGGGC +
Preference number: 6 (lower is better)
Translates to: GTHVCTGVDAHL*VHIPGIHMCKG
Trigger: GCCCTTGCACATGTGTATACCAGGTATGTGCACCCAGAGGTGTGCATCCACTCCTGTGCAGACGTGTGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565579.5
CDS CAA 72 bp AAGAAGCTCCTGGATCACCTCTGCAAGTTTTCCACATaGCAGGAGTCGCTGCCCGACTGCCTGCACTTGGTG +
Preference number: 6 (lower is better)
Translates to: KKLLDHLCKFST*QESLPDCLHLV
Trigger: CACCAAGTGCAGGCAGTCGGGCAGCGACTCCTGCAATGTGGAAAACTTGCAGAGGTGATCCAGGAGCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568245.5
CDS CAA 90 bp AGAGAAGACGATCTCCAGAGGCTCAGCCAGCTTGGTGACATGCATTaGTCCCACACTCAAACCCACCAGGCGATTGTTCAACACGCCGCT +
Preference number: 6 (lower is better)
Translates to: REDDLQRLSQLGDMH*SHTQTHQAIVQHAA
Trigger: AGCGGCGTGTTGAACAATCGCCTGGTGGGTTTGAGTGTGGGACAAATGCATGTCACCAAGCTGGCTGAGCCTCTGGAGATCGTCTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS CAA 90 bp AGGGATCGAAAAAGGCTCTTGGGAAGTCGCACTCTGTCAGGGGGCTaGTCCTCGTCCTTCATCACCTGCCTCGGAACCTCTGCAAGTTTT +
Preference number: 6 (lower is better)
Translates to: RDRKRLLGSRTLSGG*SSSFITCLGTSASF
Trigger: AAAACTTGCAGAGGTTCCGAGGCAGGTGATGAAGGACGAGGACAAGCCCCCTGACAGAGTGCGACTTCCCAAGAGCCTTTTTCGATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000450388.7
ENST00000565902.1
CDS TCA 72 bp CCAGGGCCACGTGGATCTTTGGGGCATCTTCTGACTTaGACCTCTCCCGGGAAAGCCTCAGAAAGGCATAAA +
Preference number: 6 (lower is better)
Translates to: PGPRGSLGHLLT*TSPGKASERHK
Trigger: TTTATGCCTTTCTGAGGCTTTCCCGGGAGAGGTTCAAGTCAGAAGATGCCCCAAAGATCCACGTGGCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333493.9
ENST00000450388.7
CDS GCA 72 bp AAGACGATCTCCAGAGGCTCAGCCAGCTTGGTGACATaGATTTGTCCCACACTCAAACCCACCAGGCGATTG +
Preference number: 6 (lower is better)
Translates to: KTISRGSASLVT*ICPTLKPTRRL
Trigger: CAATCGCCTGGTGGGTTTGAGTGTGGGACAAATGCATGTCACCAAGCTGGCTGAGCCTCTGGAGATCGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS CCA 72 bp CACAGGAGTGGATGCACACCTCTGGGTGCACATACCTaGTATACACATGTGCAAGGGCATGGGTACACTTGC +
Preference number: 6 (lower is better)
Translates to: HRSGCTPLGAHT*YTHVQGHGYTC
Trigger: GCAAGTGTACCCATGCCCTTGCACATGTGTATACCAGGTATGTGCACCCAGAGGTGTGCATCCACTCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565579.5
CDS GCA 72 bp TGCAAGTTTTCCACATTGCAGGAGTCGCTGCCCGACTaGCTGCACTTGGTGAAGCACAAAGCCTTGTCATTC +
Preference number: 6 (lower is better)
Translates to: CKFSTLQESLPD*LHLVKHKALSF
Trigger: GAATGACAAGGCTTTGTGCTTCACCAAGTGCAGGCAGTCGGGCAGCGACTCCTGCAATGTGGAAAACTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000565579.5
ENST00000565902.1
ENST00000567991.5
ENST00000568245.5
CDS GCA 72 bp GCACACCTCTGGGTGCACATACCTGGTATACACATGTaGAAGGGCATGGGTACACTTGCTCGTGTGGATATG +
Preference number: 6 (lower is better)
Translates to: AHLWVHIPGIHM*KGMGTLARVDM
Trigger: CATATCCACACGAGCAAGTGTACCCATGCCCTTGCACATGTGTATACCAGGTATGTGCACCCAGAGGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565579.5
CDS CAA 72 bp TCCACATTGCAGGAGTCGCTGCCCGACTGCCTGCACTaGGTGAAGCACAAAGCCTTGTCATTCAAGTTGAAG +
Preference number: 6 (lower is better)
Translates to: STLQESLPDCLH*VKHKALSFKLK
Trigger: CTTCAACTTGAATGACAAGGCTTTGTGCTTCACCAAGTGCAGGCAGTCGGGCAGCGACTCCTGCAATGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000565579.5
ENST00000565902.1
ENST00000567991.5
ENST00000568245.5
CDS CAA 72 bp GATCTCCAGAGGCTCAGCCAGCTTGGTGACATGCATTaGTCCCACACTCAAACCCACCAGGCGATTGTTCAA +
Preference number: 6 (lower is better)
Translates to: DLQRLSQLGDMH*SHTQTHQAIVQ
Trigger: TTGAACAATCGCCTGGTGGGTTTGAGTGTGGGACAAATGCATGTCACCAAGCTGGCTGAGCCTCTGGAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000567991.5
CDS CAA 90 bp TACATGGGCTTGTGCGTGCACAAGAATAGAAAAGGATGTGCATGTTaGTGCATGCACGAGGACACACAGAGCACACGAGCACCCACAGGA +
Preference number: 6 (lower is better)
Translates to: YMGLCVHKNRKGCAC*CMHEDTQSTRAPTG
Trigger: TCCTGTGGGTGCTCGTGTGCTCTGTGTGTCCTCGTGCATGCACAAACATGCACATCCTTTTCTATTCTTGTGCACGCACAAGCCCATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565579.5
CDS TCA 72 bp AAGCCAAAGGGCACTCATGTGTGGGGGTCAAACATCTaGGAGCGTGTGACCAGTGTGAGTCTGAAGACCATA +
Preference number: 6 (lower is better)
Translates to: KPKGTHVWGSNI*ERVTSVSLKTI
Trigger: TATGGTCTTCAGACTCACACTGGTCACACGCTCTCAGATGTTTGACCCCCACACATGAGTGCCCTTTGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565579.5
ENST00000565902.1
CDS CAA 90 bp AAGCACAAAGCCTTGTCATTCAAGTTGAAGATGTCGTACATGTTGTaGCTCCCCAGGCAGGTGTTTCTTGGCCCTTCGGTGGGCTTTTCC +
Preference number: 6 (lower is better)
Translates to: KHKALSFKLKMSYML*LPRQVFLGPSVGFS
Trigger: GGAAAAGCCCACCGAAGGGCCAAGAAACACCTGCCTGGGGAGCAACAACATGTACGACATCTTCAACTTGAATGACAAGGCTTTGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000565579.5
ENST00000565902.1
ENST00000567991.5
ENST00000568245.5
CDS CAA 90 bp TGCAAGTTTTCCACATTGCAGGAGTCGCTGCCCGACTGCCTGCACTaGGTGAAGCACAAAGCCTTGTCATTCAAGTTGAAGATGTCGTAC +
Preference number: 6 (lower is better)
Translates to: CKFSTLQESLPDCLH*VKHKALSFKLKMSY
Trigger: GTACGACATCTTCAACTTGAATGACAAGGCTTTGTGCTTCACCAAGTGCAGGCAGTCGGGCAGCGACTCCTGCAATGTGGAAAACTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333493.9
ENST00000450388.7
ENST00000565579.5
ENST00000565902.1
ENST00000567991.5
ENST00000568245.5
CDS GCA 72 bp TGCACAAGAATAGAAAAGGATGTGCATGTTTGTGCATaGACGAGGACACACAGAGCACACGAGCACCCACAG +
Preference number: 6 (lower is better)
Translates to: CTRIEKDVHVCA*TRTHRAHEHPQ
Trigger: CTGTGGGTGCTCGTGTGCTCTGTGTGTCCTCGTGCATGCACAAACATGCACATCCTTTTCTATTCTTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565579.5
CDS CCA 72 bp CTGAAGACCATAGACTCTAGTGACAGGTGTCTGAGATaGCCACGGGCTGCATTAGAAACACTAAGAGGCTCA +
Preference number: 6 (lower is better)
Translates to: LKTIDSSDRCLR*PRAALETLRGS
Trigger: TGAGCCTCTTAGTGTTTCTAATGCAGCCCGTGGCCATCTCAGACACCTGTCACTAGAGTCTATGGTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565579.5
ENST00000565902.1
CDS CAA 72 bp TTGTGCGTGCACAAGAATAGAAAAGGATGTGCATGTTaGTGCATGCACGAGGACACACAGAGCACACGAGCA +
Preference number: 6 (lower is better)
Translates to: LCVHKNRKGCAC*CMHEDTQSTRA
Trigger: TGCTCGTGTGCTCTGTGTGTCCTCGTGCATGCACAAACATGCACATCCTTTTCTATTCTTGTGCACGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565579.5
CDS CAA 90 bp GGTACACTTGCTCGTGTGGATATGATCACAGCTGAGTACATGGGCTaGTGCGTGCACAAGAATAGAAAAGGATGTGCATGTTTGTGCATG +
Preference number: 6 (lower is better)
Translates to: GTLARVDMITAEYMG*CVHKNRKGCACLCM
Trigger: CATGCACAAACATGCACATCCTTTTCTATTCTTGTGCACGCACAAGCCCATGTACTCAGCTGTGATCATATCCACACGAGCAAGTGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565579.5
CDS GCA 72 bp CGTGTGGATATGATCACAGCTGAGTACATGGGCTTGTaGGTGCACAAGAATAGAAAAGGATGTGCATGTTTG +
Preference number: 6 (lower is better)
Translates to: RVDMITAEYMGL*VHKNRKGCACL
Trigger: CAAACATGCACATCCTTTTCTATTCTTGTGCACGCACAAGCCCATGTACTCAGCTGTGATCATATCCACACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565579.5