RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000205336

Ensembl transcript IDs: ENST00000388813.9, ENST00000456916.5, ENST00000540164.6, ENST00000561696.5, ENST00000561782.5, ENST00000561833.5, ENST00000561872.5, ENST00000561969.5, ENST00000561988.5, ENST00000562003.5, ENST00000562101.5, ENST00000562414.5, ENST00000562467.5, ENST00000562558.6, ENST00000562608.5, ENST00000562631.7, ENST00000562673.5, ENST00000562682.5, ENST00000562804.5, ENST00000563007.5, ENST00000563374.5, ENST00000563414.5, ENST00000563445.5, ENST00000563548.5, ENST00000563862.5, ENST00000564103.5, ENST00000564360.5, ENST00000564722.5, ENST00000564729.5, ENST00000564783.5, ENST00000564907.5, ENST00000564912.5, ENST00000565013.5, ENST00000565314.5, ENST00000565338.5, ENST00000565391.1, ENST00000565505.1, ENST00000565539.5, ENST00000565587.5, ENST00000565770.5, ENST00000565976.6, ENST00000566123.5, ENST00000566164.5, ENST00000566169.5, ENST00000566187.1, ENST00000566271.6, ENST00000566508.5, ENST00000566778.5, ENST00000566888.5, ENST00000567154.5, ENST00000567397.5, ENST00000567553.5, ENST00000567702.5, ENST00000567835.5, ENST00000567915.5, ENST00000568074.5, ENST00000568157.5, ENST00000568234.5, ENST00000568487.1, ENST00000568531.5, ENST00000568618.5, ENST00000568645.5, ENST00000568700.1, ENST00000568791.5, ENST00000568908.5, ENST00000568909.5, ENST00000568979.5, ENST00000569101.5, ENST00000569132.5, ENST00000569154.5, ENST00000569158.5, ENST00000569372.5, ENST00000569494.5, ENST00000569531.5, ENST00000569992.5, ENST00000570044.5, ENST00000672974.1, ENST00000673126.2, ENST00000678252.1

Found 1928 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGCTCGGCAGCCAGCCTCAGAGCCTGTCAGGGCCACCGGCTCGCTaGGCAGGAAGCTCGTGTCCAGCAGGAAGACGGCCAGCAGCAGGT +
Preference number: 1 (lower is better)
Translates to: WLGSQPQSLSGPPAR*AGSSCPAGRRPAAG
Trigger: ACCTGCTGCTGGCCGTCTTCCTGCTGGACACGAGCTTCCTGCTCAGCGAGCCGGTGGCCCTGACAGGCTCTGAGGCTGGCTGCCGAGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR TCA 90 bp GTGGGCTGGAGGCCTAGATGCGGCTGGACGAGGTGCTGCCCGAGCTaGTGGGGAGCCTGGCGCTGTCTGAGTTGCTCTTCAGAGGGGAGG +
Preference number: 1 (lower is better)
Translates to: VGWRPRCGWTRCCPS*WGAWRCLSCSSEGR
Trigger: CCTCCCCTCTGAAGAGCAACTCAGACAGCGCCAGGCTCCCCATCAGCTCGGGCAGCACCTCGTCCAGCCGCATCTAGGCCTCCAGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR CCA 90 bp CGGGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGTCGTTaGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGG +
Preference number: 1 (lower is better)
Translates to: RESVHHGNGPSLHGR*AFQSLRLTGLGLGR
Trigger: CCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR CCA 90 bp CCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATaGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCT +
Preference number: 1 (lower is better)
Translates to: PSPGVRPPWQRPISP*SLGFPKSAADWPGA
Trigger: AGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR CCA 90 bp AACTGCTGGCTGGCGGGGGCAGCCGAGGGCCTCCTTGAGGCCTTCTaGGGATGCTTCAGGAACTGGCTGAGCAGCTGGAGGTCCCTTTTG +
Preference number: 1 (lower is better)
Translates to: NCWLAGAAEGLLEAF*GCFRNWLSSWRSLL
Trigger: CAAAAGGGACCTCCAGCTGCTCAGCCAGTTCCTGAAGCATCCCCAGAAGGCCTCAAGGAGGCCCTCGGCTGCCCCCGCCAGCCAGCAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR TCA 90 bp CCTAGGCAGCATGGCGGCGCACTTCTGAGTCCCGTGGGAGCTGAGTaGGAGCCGAGTAGTCCCCAAGGCCAATTCAAAAGCCCAGCCCGG +
Preference number: 1 (lower is better)
Translates to: PRQHGGALLSPVGAE*EPSSPQGQFKSPAR
Trigger: CCGGGCTGGGCTTTTGAATTGGCCTTGGGGACTACTCGGCTCTCACTCAGCTCCCACGGGACTCAGAAGTGCGCCGCCATGCTGCCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR CCA 90 bp GCCAGGGCTCTGGCCCTGAAGGTCTGCCCTGGGCCCCATTCGCCCTaGGTGCCACCTGAGGTTAAAATGACAGAGGATGCAGAGTGCCCT +
Preference number: 1 (lower is better)
Translates to: ARALALKVCPGPHSP*VPPEVKMTEDAECP
Trigger: AGGGCACTCTGCATCCTCTGTCATTTTAACCTCAGGTGGCACCCAGGGCGAATGGGGCCCAGGGCAGACCTTCAGGGCCAGAGCCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR CCA 90 bp AGGACCAGGCTGAGGCCCAGCAGTGTCAGCACATGTGACCACTTTTaGGTGTGGGGGCGCAGCCGCAGGATCTGCACCACCATGGTGGCT +
Preference number: 1 (lower is better)
Translates to: RTRLRPSSVSTCDHF*VWGRSRRICTTMVA
Trigger: AGCCACCATGGTGGTGCAGATCCTGCGGCTGCGCCCCCACACCCAAAAGTGGTCACATGTGCTGACACTGCTGGGCCTCAGCCTGGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR TCA 90 bp TCGTGTCCAGCAGGAAGACGGCCAGCAGCAGGTTCATGTGCACCTTaGTGGTGTAGTCCCGAGGTTTCCTCCTGCACGGCAGGGGCACCC +
Preference number: 1 (lower is better)
Translates to: SCPAGRRPAAGSCAP*WCSPEVSSCTAGAP
Trigger: GGGTGCCCCTGCCGTGCAGGAGGAAACCTCGGGACTACACCATCAAGGTGCACATGAACCTGCTGCTGGCCGTCTTCCTGCTGGACACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR CCA 90 bp AGGCTGAGGCCCAGCAGTGTCAGCACATGTGACCACTTTTGGGTGTaGGGGCGCAGCCGCAGGATCTGCACCACCATGGTGGCTAGCATG +
Preference number: 1 (lower is better)
Translates to: RLRPSSVSTCDHFWV*GRSRRICTTMVASM
Trigger: CATGCTAGCCACCATGGTGGTGCAGATCCTGCGGCTGCGCCCCCACACCCAAAAGTGGTCACATGTGCTGACACTGCTGGGCCTCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR GCA 90 bp AGGGCCCCTCTGAGGCGTGTGCTTGGTCAGGGTGAGCAAGGGCAATaGAGCTCATACAAAGGCCCAGATGGACAGAGGGACCTAGCCCAG +
Preference number: 1 (lower is better)
Translates to: RAPLRRVLGQGEQGQ*SSYKGPDGQRDLAQ
Trigger: CTGGGCTAGGTCCCTCTGTCCATCTGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACCAAGCACACGCCTCAGAGGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR TCA 90 bp TCTGCCCTGGGCCCCATTCGCCCTGGGTGCCACCTGAGGTTAAAATaGCAGAGGATGCAGAGTGCCCTCAGGGTGACCACGAGAGACAGA +
Preference number: 1 (lower is better)
Translates to: SALGPIRPGCHLRLK*QRMQSALRVTTRDR
Trigger: TCTGTCTCTCGTGGTCACCCTGAGGGCACTCTGCATCCTCTGTCATTTTAACCTCAGGTGGCACCCAGGGCGAATGGGGCCCAGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR TCA 90 bp TCAGGAGAGGCTGAGGGCCCCTCTGAGGCGTGTGCTTGGTCAGGGTaGGCAAGGGCAATGCAGCTCATACAAAGGCCCAGATGGACAGAG +
Preference number: 1 (lower is better)
Translates to: SGEAEGPSEACAWSG*ARAMQLIQRPRWTE
Trigger: CTCTGTCCATCTGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACCAAGCACACGCCTCAGAGGGGCCCTCAGCCTCTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR TCA 90 bp TCGTGTCCAGCAGGAAGACGGCCAGCAGCAGGTTCATGTGCACCTTaGTGGTGTAGTCCCGAGGTTTCCTCCTGGAGCAGAGGTAGGCGG +
Preference number: 1 (lower is better)
Translates to: SCPAGRRPAAGSCAP*WCSPEVSSWSRGRR
Trigger: CCGCCTACCTCTGCTCCAGGAGGAAACCTCGGGACTACACCATCAAGGTGCACATGAACCTGCTGCTGGCCGTCTTCCTGCTGGACACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565539.5
3UTR GCA 90 bp CCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCGAGGCTTGTaGAGTAGACAAACATTTACAGCAGACACCAGGCAGCTCCTGGAA +
Preference number: 1 (lower is better)
Translates to: PRIGTEPGSGAGRGL*SRQTFTADTRQLLE
Trigger: TTCCAGGAGCTGCCTGGTGTCTGCTGTAAATGTTTGTCTACTGCACAAGCCTCGGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR CCA 90 bp TCAGGCCCTAGGCCAGTGTCACCAGAGGAGGTCAGTCTCAGTCCTTaGAGTGGTGGGATGGAAACCAGACGGGACTGGCATGGTCCACAG +
Preference number: 1 (lower is better)
Translates to: SGPRPVSPEEVSLSP*SGGMETRRDWHGPQ
Trigger: CTGTGGACCATGCCAGTCCCGTCTGGTTTCCATCCCACCACTCCAAGGACTGAGACTGACCTCCTCTGGTGACACTGGCCTAGGGCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR CCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATaGCAACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCAAAGTCT +
Preference number: 1 (lower is better)
Translates to: SPRPIQKPSPGVRPP*QRPISPWSLGFPKS
Trigger: AGACTTTGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR GCA 90 bp AGCACATGTGACCACTTTTGGGTGTGGGGGCGCAGCCGCAGGATCTaGACCACCATGGTGGCTAGCATGGCCATGTTGAACAGAAACACC +
Preference number: 1 (lower is better)
Translates to: STCDHFWVWGRSRRI*TTMVASMAMLNRNT
Trigger: GGTGTTTCTGTTCAACATGGCCATGCTAGCCACCATGGTGGTGCAGATCCTGCGGCTGCGCCCCCACACCCAAAAGTGGTCACATGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR CCA 90 bp GAGGATGCAGAGTGCCCTCAGGGTGACCACGAGAGACAGAGCAACTaGAGCCACATTTCTGTCCCAGGCAGGGGCACAGGATTAAGGATG +
Preference number: 1 (lower is better)
Translates to: EDAECPQGDHERQSN*SHISVPGRGTGLRM
Trigger: CATCCTTAATCCTGTGCCCCTGCCTGGGACAGAAATGTGGCTCCAGTTGCTCTGTCTCTCGTGGTCACCCTGAGGGCACTCTGCATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR CCA 90 bp TCTCAGTCCTTGGAGTGGTGGGATGGAAACCAGACGGGACTGGCATaGTCCACAGTTCTTGCCACAAGAGGGCTTCAGGAGAGGCTGAGG +
Preference number: 1 (lower is better)
Translates to: SQSLEWWDGNQTGLA*STVLATRGLQERLR
Trigger: CCTCAGCCTCTCCTGAAGCCCTCTTGTGGCAAGAACTGTGGACCATGCCAGTCCCGTCTGGTTTCCATCCCACCACTCCAAGGACTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR CCA 90 bp GTCAGTCTCAGTCCTTGGAGTGGTGGGATGGAAACCAGACGGGACTaGCATGGTCCACAGTTCTTGCCACAAGAGGGCTTCAGGAGAGGC +
Preference number: 1 (lower is better)
Translates to: VSLSPWSGGMETRRD*HGPQFLPQEGFRRG
Trigger: GCCTCTCCTGAAGCCCTCTTGTGGCAAGAACTGTGGACCATGCCAGTCCCGTCTGGTTTCCATCCCACCACTCCAAGGACTGAGACTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR CCA 90 bp CAGGGAGTCCCGGATCCAGCACATGGAAGGGTAGATGACGCCCTCTaGAGTCCTATGCACAGCCAAGATGATGGGGCCATAGTTGTCCAC +
Preference number: 1 (lower is better)
Translates to: QGVPDPAHGRVDDAL*SPMHSQDDGAIVVH
Trigger: GTGGACAACTATGGCCCCATCATCTTGGCTGTGCATAGGACTCCAGAGGGCGTCATCTACCCTTCCATGTGCTGGATCCGGGACTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR TCA 90 bp CTTCACGCACGCCTCACATACCAGACTGAATGTTGGCAGGAGGAGTaGCCAGGTCGGTCATCTGTGTCCCTACCACCTACAACAGGCCAG +
Preference number: 1 (lower is better)
Translates to: LHARLTYQTECWQEE*PGRSSVSLPPTTGQ
Trigger: CTGGCCTGTTGTAGGTGGTAGGGACACAGATGACCGACCTGGTCACTCCTCCTGCCAACATTCAGTCTGGTATGTGAGGCGTGCGTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR TCA 90 bp AACGCTGACTCCTGCAGGAAGTCTTCCAGGATTCCCAGGCAGGAATaGTGGCTCCCTGTCCCTGTAGCTCCAGGAGTTCTTGCTTCACGC +
Preference number: 1 (lower is better)
Translates to: NADSCRKSSRIPRQE*WLPVPVAPGVLASR
Trigger: GCGTGAAGCAAGAACTCCTGGAGCTACAGGGACAGGGAGCCATCATTCCTGCCTGGGAATCCTGGAAGACTTCCTGCAGGAGTCAGCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR TCA 90 bp AGTAGGTCAAGTGGTTGCAGAAGCAGGATGTTTGGGTTTCTCTCCTaGCGGTCTCACACCCAGCACTGCTCCAATGCCCCGGGCTGCTCA +
Preference number: 1 (lower is better)
Translates to: SRSSGCRSRMFGFLS*RSHTQHCSNAPGCS
Trigger: TGAGCAGCCCGGGGCATTGGAGCAGTGCTGGGTGTGAGACCGTCAGGAGAGAAACCCAAACATCCTGCTTCTGCAACCACTTGACCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR CCA 90 bp CAGTGTCACCAGAGGAGGTCAGTCTCAGTCCTTGGAGTGGTGGGATaGAAACCAGACGGGACTGGCATGGTCCACAGTTCTTGCCACAAG +
Preference number: 1 (lower is better)
Translates to: QCHQRRSVSVLGVVG*KPDGTGMVHSSCHK
Trigger: CTTGTGGCAAGAACTGTGGACCATGCCAGTCCCGTCTGGTTTCCATCCCACCACTCCAAGGACTGAGACTGACCTCCTCTGGTGACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR CCA 90 bp CCCTACCACCTACAACAGGCCAGCAATCTACCCGTGTGTGTTTGTTaGACAGAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCTA +
Preference number: 1 (lower is better)
Translates to: PYHLQQASNLPVCVC*TELTMMGGRGRLEL
Trigger: TAGCTCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTCTGTCCAACAAACACACACGGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR TCA 90 bp GTAGCTCCAGGAGTTCTTGCTTCACGCACGCCTCACATACCAGACTaGATGTTGGCAGGAGGAGTGACCAGGTCGGTCATCTGTGTCCCT +
Preference number: 1 (lower is better)
Translates to: VAPGVLASRTPHIPD*MLAGGVTRSVICVP
Trigger: AGGGACACAGATGACCGACCTGGTCACTCCTCCTGCCAACATTCAGTCTGGTATGTGAGGCGTGCGTGAAGCAAGAACTCCTGGAGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR TCA 90 bp CGTAAAAAGAACATCCTTCCCATCTTCAAGGTCAAGATTGAACGCTaGCTCCTGCAGGAAGTCTTCCAGGATTCCCAGGCAGGAATGATG +
Preference number: 1 (lower is better)
Translates to: RKKNILPIFKVKIER*LLQEVFQDSQAGMM
Trigger: CATCATTCCTGCCTGGGAATCCTGGAAGACTTCCTGCAGGAGTCAGCGTTCAATCTTGACCTTGAAGATGGGAAGGATGTTCTTTTTACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GCTCGGCAGCCAGCCTCAGAGCCTGTCAGGGCCACCGGCTCGCTGAGCAGGAAGTCTGCAACTGCTGGCTaGCGGGGGCAGCCGAGGGCC +
Preference number: 2 (lower is better)
Translates to: ARQPASEPVRATGSLSRKSATAG*RGQPRA
Trigger: GGCCCTCGGCTGCCCCCGCCAGCCAGCAGTTGCAGA...CTTCCTGCTCAGCGAGCCGGTGGCCCTGACAGGCTCTGAGGCTGGCTGCCGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCAGGCCGGCTGTGGGCTaGAGCTTCCACACCGTGGCG +
Preference number: 2 (lower is better)
Translates to: EGPSPAHASVPSLAQGQARPAVG*SFHTVA
Trigger: CGCCACGGTGTGGAAGCTCCAGCCCACAGCCGGCCT...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR TCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTTCCAAAGTCTGCGGCTaGCTGGCCTGGGGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRASKVCG*LAWGWA
Trigger: GGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGA...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR TCA 90 bp CTCTGCAACTGCTGGCTGGCGGGGGCAGCCGAGGGCCTCCTTGAGGCCTTCTGGCGGCACTGGGCAGGCTaGTGTTCTGAGGGCTCCACC +
Preference number: 2 (lower is better)
Translates to: LCNCWLAGAAEGLLEAFWRHWAG*CSEGST
Trigger: GGTGGAGCCCTCAGAACATCAGCCTGCCCAGTGCCG...CCAGAAGGCCTCAAGGAGGCCCTCGGCTGCCCCCGCCAGCCAGCAGTTGCAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR TCA 90 bp GCTCGGCAGCCAGCCTCAGAGCCTGTCAGGGCCACCGGCTCGCTGAGCAGGAAGGGTAGGCGGCAATGGTaGCAAGGCAGGCCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: ARQPASEPVRATGSLSRKGRRQW*QGRPGQ
Trigger: CTGCCCTGGCCTGCCTTGTCACCATTGCCGCCTACC...CTTCCTGCTCAGCGAGCCGGTGGCCCTGACAGGCTCTGAGGCTGGCTGCCGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR GCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCGGCGAGCTGCTGCTGTaGTCCTGGCAAAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: EGPSPAHASVPSLAQGQAGELLL*SWQRAS
Trigger: AGAGGCCCTTTGCCAGGAGCACAGCAGCAGCTCGCC...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTGCGGCCGAGGGCGCCTaGAGCTATTTGGGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRAAAEGA*SYLGAW
Trigger: CCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCAGGGCCACCCCGGGCCTaGAGCCGCATGGACCAGTAC +
Preference number: 2 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGAGPPRA*SRMDQY
Trigger: GTACTGGTCCATGCGGCTGCAGGCCCGGGGTGGCCC...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCAAAGTCTGCGGCTGACTaGCCTGGGGCTGGGCCGGGC +
Preference number: 2 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGAKSAAD*PGAGPG
Trigger: GCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTT...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp TGGACAGAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCCTGAAGGTCTGCCCTaGGCCCCATTCGCCCTGGGT +
Preference number: 2 (lower is better)
Translates to: WTEGPSPAHASVPSLAQGPEGLP*APFALG
Trigger: ACCCAGGGCGAATGGGGCCCAGGGCAGACCTTCAGG...CCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTCTGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR CAA 90 bp CCGGGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGTCGTaGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCG +
Preference number: 2 (lower is better)
Translates to: PGVRPPWQRPISPWS*GFPKSAADWPGAGP
Trigger: CGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR GCA 90 bp CCTCCCCGCTCCGGCCTTTCGTCCTCTGGAAGAGTGTTCGAGGCAGCAGCACCGTGCCGGGAGTGGATGTaGAGGTCCTGGAGGCCGGCT +
Preference number: 2 (lower is better)
Translates to: PPRSGLSSSGRVFEAAAPCREWM*RSWRPA
Trigger: AGCCGGCCTCCAGGACCTGCACATCCACTCCCGGCA...CGGTGCTGCTGCCTCGAACACTCTTCCAGAGGACGAAAGGCCGGAGCGGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CCA 90 bp GATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAAAGTCTGCGGCTGACTaGCCTGGGGCTGGGCCGGGC +
Preference number: 2 (lower is better)
Translates to: DGRPRAPGAIWGLGENLLKSAAD*PGAGPG
Trigger: GCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTT...TAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGAAGTCTGCGGCTGACTaGCCTGGGGCTGGGCCGGGC +
Preference number: 2 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRKSAAD*PGAGPG
Trigger: GCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTT...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCAAGGCTCTGCAACTGCTaGCTGGCGGGGGCAGCCGAG +
Preference number: 2 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGARLCNC*LAGAAE
Trigger: CTCGGCTGCCCCCGCCAGCCAGCAGTTGCAGAGCCT...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR TCA 90 bp TGGACAGAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGACAGGGCTTGGCTGCTaGAGTCCACCAGGAGGAGTC +
Preference number: 2 (lower is better)
Translates to: WTEGPSPAHASVPSLAQGTGLGC*SPPGGV
Trigger: GACTCCTCCTGGTGGACTTCAGCAGCCAAGCCCTGT...CCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTCTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR TCA 90 bp GGAAAGGCAGGTGAGCAGGGAGAAGTGCAGGAAGATGGCACTGGCTCGGCAGCCGGGCCACCGGCTCGCTaGGCAGGAAGCTCGTGTCCA +
Preference number: 2 (lower is better)
Translates to: GKAGEQGEVQEDGTGSAAGPPAR*AGSSCP
Trigger: TGGACACGAGCTTCCTGCTCAGCGAGCCGGTGGCCC...GGCTGCCGAGCCAGTGCCATCTTCCTGCACTTCTCCCTGCTCACCTGCCTTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR GCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTTCCATGATCTCGCTCTaGTCCTCCTCCTGCCGGGAG +
Preference number: 2 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRASMISL*SSSCRE
Trigger: CTCCCGGCAGGAGGAGGAGCAGAGCGAGATCATGGA...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR GCA 90 bp GCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAGGAGACCCGAGGTTTCCTCCTaGACGGCAGGGGCACCCTGG +
Preference number: 2 (lower is better)
Translates to: AAEGAWSYLGAWREPLRRPEVSS*TAGAPW
Trigger: CCAGGGTGCCCCTGCCGTGCAGGAGGAAACCTCGGG...TCTCCTAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR CCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCATCGGTACCGAGCCTaGCTCAGGGGCAGGCCGAGG +
Preference number: 2 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRHRYRA*LRGRPR
Trigger: CCTCGGCCTGCCCCTGAGCCAGGCTCGGTACCGATG...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GCTCGGCAGCCAGCCTCAGAGCCTGTCAGGGCCACCGGCTCGCTGAGCAGGAAGGGATGCTTCAGGAACTaGCTGAGCAGCTGGAGGTCC +
Preference number: 2 (lower is better)
Translates to: ARQPASEPVRATGSLSRKGCFRN*LSSWRS
Trigger: GGACCTCCAGCTGCTCAGCCAGTTCCTGAAGCATCC...CTTCCTGCTCAGCGAGCCGGTGGCCCTGACAGGCTCTGAGGCTGGCTGCCGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CCA 90 bp TTCTCAGCCTCCCCGCTCCGGCCTTTCGTCCTCTGGAAGAGTGTTCGAGGCAGCCCTGGAGGCCGGCTGTaGGCTGGAGCTTCCACACCG +
Preference number: 2 (lower is better)
Translates to: FSASPLRPFVLWKSVRGSPGGRL*AGASTP
Trigger: CGGTGTGGAAGCTCCAGCCCACAGCCGGCCTCCAGG...GCTGCCTCGAACACTCTTCCAGAGGACGAAAGGCCGGAGCGGGGAGGCTGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR TCA 90 bp GATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAGGGGACCCCCAGCTGTaGACGAAGGAGCAAGGAGGC +
Preference number: 2 (lower is better)
Translates to: DGRPRAPGAIWGLGENLLGDPQL*TKEQGG
Trigger: GCCTCCTTGCTCCTTCGTTCACAGCTGGGGGTCCCC...TAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR TCA 90 bp GTCCACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTCGGCACTGGGCAGGCTaGTGTTCTGAGGGCTCCACC +
Preference number: 2 (lower is better)
Translates to: VHRGIVSGRVGRTVEGEGRHWAG*CSEGST
Trigger: GGTGGAGCCCTCAGAACATCAGCCTGCCCAGTGCCG...ACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563007.5
ENST00000564907.5
ENST00000565539.5
ENST00000568645.5
3UTR-3UTR GCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCAGGGCCACAGGCAGTGTaGGACGAGGCCGAATCTCTG +
Preference number: 2 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGAGPQAV*DEAESL
Trigger: CAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCC...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR GCA 90 bp GCCCTAGGCCAGTGTCACCAGAGGAGGTCAGTCTCAGTCCTTGGAGTGGTGGGACTGGCCCTGAAGGTCTaGCCTGGGCCCCATTCGCCC +
Preference number: 2 (lower is better)
Translates to: ALGQCHQRRSVSVLGVVGLALKV*PGPHSP
Trigger: GGGCGAATGGGGCCCAGGGCAGACCTTCAGGGCCAG...TCCCACCACTCCAAGGACTGAGACTGACCTCCTCTGGTGACACTGGCCTAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp AGGGCTTGGCTGCTGAAGTCCACCAGGAGGAGTCTCTTCTCAGCCTCCCCGCTCTGCCGGGAGTGGATGTaGAGGTCCTGGAGGCCGGCT +
Preference number: 2 (lower is better)
Translates to: RAWLLKSTRRSLFSASPLCREWM*RSWRPA
Trigger: AGCCGGCCTCCAGGACCTGCACATCCACTCCCGGCA...GAGCGGGGAGGCTGAGAAGAGACTCCTCCTGGTGGACTTCAGCAGCCAAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR GCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGGGCTGGAGGCCTAGATaGGGCTGGACGAGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRGWRPR*GWTRCC
Trigger: GCAGCACCTCGTCCAGCCGCATCTAGGCCTCCAGCC...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CCA 90 bp CCTCCCCGCTCCGGCCTTTCGTCCTCTGGAAGAGTGTTCGAGGCAGCAGCACCGGGAGTCCGTCCACCATaGCAACGGCCCATCTCTCCA +
Preference number: 2 (lower is better)
Translates to: PPRSGLSSSGRVFEAAAPGVRPP*QRPISP
Trigger: TGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCC...CGGTGCTGCTGCCTCGAACACTCTTCCAGAGGACGAAAGGCCGGAGCGGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CCA 90 bp TGGACAGAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGTCAAGATCCAAGGCCTaGCCCCCAGCAATGAGGGCT +
Preference number: 2 (lower is better)
Translates to: WTEGPSPAHASVPSLAQGSRSKA*PPAMRA
Trigger: AGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGA...CCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTCTGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GCCCTAGGCCAGTGTCACCAGAGGAGGTCAGTCTCAGTCCTTGGAGTGGTGGGACATCGGTACCGAGCCTaGCTCAGGGGCAGGCCGAGG +
Preference number: 2 (lower is better)
Translates to: ALGQCHQRRSVSVLGVVGHRYRA*LRGRPR
Trigger: CCTCGGCCTGCCCCTGAGCCAGGCTCGGTACCGATG...TCCCACCACTCCAAGGACTGAGACTGACCTCCTCTGGTGACACTGGCCTAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR CAA 90 bp AGGTCCTGGAGGCCGGCTGTGGGCTGGAGCTTCCACACCGTGGCGTaGATCCGGTCCTCCTCGAAGGACACCATGTCCCCCATGAATCTC +
Preference number: 2 (lower is better)
Translates to: RSWRPAVGWSFHTVA*IRSSSKDTMSPMNL
Trigger: GAGATTCATGGGGGACATGGTGTCCTTCGAGGAGGACCGGATCAACGCCACGGTGTGGAAGCTCCAGCCCACAGCCGGCCTCCAGGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR TCA 90 bp TGGGAGCTGAGTGAGAGCCGAGTAGTCCCCAAGGCCAATTCAAAAGCCCAGCCCTCCAAAGTCTGCGGCTaGCTGGCCTGGGGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: WELSESRVVPKANSKAQPSKVCG*LAWGWA
Trigger: GGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGA...GGGCTGGGCTTTTGAATTGGCCTTGGGGACTACTCGGCTCTCACTCAGCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR TCA 90 bp GTCCACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTGGCAGGCTGATGTTCTaGGGGCTCCACCAGGAGGTG +
Preference number: 2 (lower is better)
Translates to: VHRGIVSGRVGRTVEGEGGRLMF*GLHQEV
Trigger: CACCTCCTGGTGGAGCCCTCAGAACATCAGCCTGCC...ACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563007.5
ENST00000564907.5
ENST00000565539.5
ENST00000568645.5
3UTR-3UTR TCA 90 bp CCCGCTCCGGCCTTTCGTCCTCTGGAAGAGTGTTCGAGGCAGCAGCACCGAGTAGGCAGGCTGATGTTCTaGGGGCTCCACCAGGAGGTG +
Preference number: 2 (lower is better)
Translates to: PAPAFRPLEECSRQQHRVGRLMF*GLHQEV
Trigger: CACCTCCTGGTGGAGCCCTCAGAACATCAGCCTGCC...TACTCGGTGCTGCTGCCTCGAACACTCTTCCAGAGGACGAAAGGCCGGAGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR TCA 90 bp GAGAGCCGAGTAGTCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCGGCAGGCTGATGTTCTaGGGGCTCCACCAGGAGGTG +
Preference number: 2 (lower is better)
Translates to: ESRVVPKANSKAQPGSPSGRLMF*GLHQEV
Trigger: CACCTCCTGGTGGAGCCCTCAGAACATCAGCCTGCC...GGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGACTACTCGGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR TCA 90 bp CACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTGAACGGCACTGGGCAGGCTaGTGTTCTGAGGGCTCCACC +
Preference number: 2 (lower is better)
Translates to: HRGIVSGRVGRTVEGEGERHWAG*CSEGST
Trigger: GGTGGAGCCCTCAGAACATCAGCCTGCCCAGTGCCG...TTCACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563007.5
ENST00000564907.5
ENST00000565539.5
ENST00000568645.5
3UTR-3UTR GCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGGGGCCACAGGCAGTGTaGGACGAGGCCGAATCTCTG +
Preference number: 2 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRGPQAV*DEAESL
Trigger: CAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCC...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR GCA 90 bp GATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAGGGCCACAGGCAGTGTaGGACGAGGCCGAATCTCTG +
Preference number: 2 (lower is better)
Translates to: DGRPRAPGAIWGLGENLLGPQAV*DEAESL
Trigger: CAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCC...TAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGGGCGAGCTGCTGCTGTaGTCCTGGCAAAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRGELLL*SWQRAS
Trigger: AGAGGCCCTTTGCCAGGAGCACAGCAGCAGCTCGCC...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp GGAAAGGCAGGTGAGCAGGGAGAAGTGCAGGAAGATGGCACTGGCTCGGCAGCCTTCGACTCCAGGCTCTaGAACTGCTGGCTGGCGGGG +
Preference number: 2 (lower is better)
Translates to: GKAGEQGEVQEDGTGSAAFDSRL*NCWLAG
Trigger: CCCCGCCAGCCAGCAGTTGCAGAGCCTGGAGTCGAA...GGCTGCCGAGCCAGTGCCATCTTCCTGCACTTCTCCCTGCTCACCTGCCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGGACCAGGCCTCCAGCTaGGTTGGGACAGATGTGGGG +
Preference number: 2 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRDQASS*VGTDVG
Trigger: CCCCACATCTGTCCCAACCCAGCTGGAGGCCTGGTC...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp GAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGCCTGAAGGTCTGCCCTaGGCCCCATTCGCCCTGGGT +
Preference number: 2 (lower is better)
Translates to: ELTMMGGRGRLELFGGLEPEGLP*APFALG
Trigger: ACCCAGGGCGAATGGGGCCCAGGGCAGACCTTCAGG...CTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGGCCAGGCTCTCCTCCTaGTGCTGGAAGCAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRARLSS*CWKQRR
Trigger: CCTCCTCTGCTTCCAGCACCAGGAGGAGAGCCTGGC...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CCA 90 bp GACCAGGTCGGTCATCTGTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCTCTGCAACTGCTGGCTaGCGGGGGCAGCCGAGGGCC +
Preference number: 2 (lower is better)
Translates to: DQVGHLCPYHLQQASNLPSATAG*RGQPRA
Trigger: GGCCCTCGGCTGCCCCCGCCAGCCAGCAGTTGCAGA...GGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACACAGATGACCGACCTGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR CCA 90 bp GGAAAGGCAGGTGAGCAGGGAGAAGTGCAGGAAGATGGCACTGGCTCGGCAGCCTCCTCCTGCCGGGAGTaGATGTGCAGGTCCTGGAGG +
Preference number: 2 (lower is better)
Translates to: GKAGEQGEVQEDGTGSAASSCRE*MCRSWR
Trigger: CCTCCAGGACCTGCACATCCACTCCCGGCAGGAGGA...GGCTGCCGAGCCAGTGCCATCTTCCTGCACTTCTCCCTGCTCACCTGCCTTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CCA 90 bp GCTCGGCAGCCAGCCTCAGAGCCTGTCAGGGCCACCGGCTCGCTGAGCAGGAAGCTGGAATTCTTGTCCTaGAACAGGGCTTGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: ARQPASEPVRATGSLSRKLEFLS*NRAWLL
Trigger: CAGCAGCCAAGCCCTGTTCCAGGACAAGAATTCCAG...CTTCCTGCTCAGCGAGCCGGTGGCCCTGACAGGCTCTGAGGCTGGCTGCCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR TCA 90 bp GACCAGGTCGGTCATCTGTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCTCCAAAGTCTGCGGCTaGCTGGCCTGGGGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: DQVGHLCPYHLQQASNLPSKVCG*LAWGWA
Trigger: GGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGA...GGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACACAGATGACCGACCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR TCA 90 bp AGCCACATTTCTGTCCCAGGCAGGGGCACAGGATTAAGGATGTGCCAGACCCTCTCCAAAGTCTGCGGCTaGCTGGCCTGGGGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: SHISVPGRGTGLRMCQTLSKVCG*LAWGWA
Trigger: GGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGA...GAGGGTCTGGCACATCCTTAATCCTGTGCCCCTGCCTGGGACAGAAATGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR TCA 90 bp GCCATAGTTGTCCACATCCACCAGGGCCACCAGCGTCACCAGAAAGATGGGGAATCCAAAGTCTGCGGCTaGCTGGCCTGGGGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: AIVVHIHQGHQRHQKDGESKVCG*LAWGWA
Trigger: GGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGA...TTCCCCATCTTTCTGGTGACGCTGGTGGCCCTGGTGGATGTGGACAACTATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR TCA 90 bp GCCCTAGGCCAGTGTCACCAGAGGAGGTCAGTCTCAGTCCTTGGAGTGGTGGGACCCGTGGGAGCTGAGTaGGAGCCGAGTAGTCCCCAA +
Preference number: 2 (lower is better)
Translates to: ALGQCHQRRSVSVLGVVGPVGAE*EPSSPQ
Trigger: TTGGGGACTACTCGGCTCTCACTCAGCTCCCACGGG...TCCCACCACTCCAAGGACTGAGACTGACCTCCTCTGGTGACACTGGCCTAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR TCA 90 bp CACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTGAAGGCAGGCTGATGTTCTaGGGGCTCCACCAGGAGGTG +
Preference number: 2 (lower is better)
Translates to: HRGIVSGRVGRTVEGEGEGRLMF*GLHQEV
Trigger: CACCTCCTGGTGGAGCCCTCAGAACATCAGCCTGCC...TTCACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563007.5
ENST00000564907.5
ENST00000565539.5
ENST00000568645.5
3UTR-3UTR TCA 90 bp ATCTCTCCATGGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTTCCACCGAGGCATTGTaGGCGGCCGTGTGGGGAGGA +
Preference number: 2 (lower is better)
Translates to: ISPWSLGFPKSAADWPGASTEAL*AAVWGG
Trigger: TCCTCCCCACACGGCCGCTCACAATGCCTCGGTGGA...AGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR TCA 90 bp GGAAAGGCAGGTGAGCAGGGAGAAGTGCAGGAAGATGGCACTGGCTCGGCAGCCGCACCACGGGCTCCGTaGGGTTGGCTACTTTGGTGT +
Preference number: 2 (lower is better)
Translates to: GKAGEQGEVQEDGTGSAAAPRAP*GWLLWC
Trigger: ACACCAAAGTAGCCAACCTCACGGAGCCCGTGGTGC...GGCTGCCGAGCCAGTGCCATCTTCCTGCACTTCTCCCTGCTCACCTGCCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR TCA 90 bp GAAGTCTTCCAGGATTCCCAGGCAGGAATGATGGCTCCCTGTCCCTGTAGCTCCGGGCCACCGGCTCGCTaGGCAGGAAGCTCGTGTCCA +
Preference number: 2 (lower is better)
Translates to: EVFQDSQAGMMAPCPCSSGPPAR*AGSSCP
Trigger: TGGACACGAGCTTCCTGCTCAGCGAGCCGGTGGCCC...GGAGCTACAGGGACAGGGAGCCATCATTCCTGCCTGGGAATCCTGGAAGACTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR GCA 90 bp GAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGGGGCCACAGGCAGTGTaGGACGAGGCCGAATCTCTG +
Preference number: 2 (lower is better)
Translates to: ELTMMGGRGRLELFGGLEGPQAV*DEAESL
Trigger: CAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCC...CTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp GCAGAGTGCCCTCAGGGTGACCACGAGAGACAGAGCAACTGGAGCCACATTTCTCTGGCCCTGAAGGTCTaGCCTGGGCCCCATTCGCCC +
Preference number: 2 (lower is better)
Translates to: AECPQGDHERQSNWSHISLALKV*PGPHSP
Trigger: GGGCGAATGGGGCCCAGGGCAGACCTTCAGGGCCAG...AGAAATGTGGCTCCAGTTGCTCTGTCTCTCGTGGTCACCCTGAGGGCACTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp AACCAGACGGGACTGGCATGGTCCACAGTTCTTGCCACAAGAGGGCTTCAGGAGCTGGCCCTGAAGGTCTaGCCTGGGCCCCATTCGCCC +
Preference number: 2 (lower is better)
Translates to: NQTGLAWSTVLATRGLQELALKV*PGPHSP
Trigger: GGGCGAATGGGGCCCAGGGCAGACCTTCAGGGCCAG...CTCCTGAAGCCCTCTTGTGGCAAGAACTGTGGACCATGCCAGTCCCGTCTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp AGACAGAGCAACTGGAGCCACATTTCTGTCCCAGGCAGGGGCACAGGATTAAGGAAGTCTGCGGCTGACTaGCCTGGGGCTGGGCCGGGC +
Preference number: 2 (lower is better)
Translates to: RQSNWSHISVPGRGTGLRKSAAD*PGAGPG
Trigger: GCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTT...CCTTAATCCTGTGCCCCTGCCTGGGACAGAAATGTGGCTCCAGTTGCTCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp GCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAGGAGAGGAGTCCGTCCACCATaGCAACGGCCCATCTCTCCA +
Preference number: 2 (lower is better)
Translates to: AAEGAWSYLGAWREPLRRGVRPP*QRPISP
Trigger: TGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCC...TCTCCTAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp AGGGCTTGGCTGCTGAAGTCCACCAGGAGGAGTCTCTTCTCAGCCTCCCCGCTCGGAGTCCGTCCACCATaGCAACGGCCCATCTCTCCA +
Preference number: 2 (lower is better)
Translates to: RAWLLKSTRRSLFSASPLGVRPP*QRPISP
Trigger: TGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCC...GAGCGGGGAGGCTGAGAAGAGACTCCTCCTGGTGGACTTCAGCAGCCAAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGGGAGTCCGTCCACCATaGCAACGGCCCATCTCTCCA +
Preference number: 2 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRGVRPP*QRPISP
Trigger: TGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCC...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCATCAAGATCCAAGGCCTaGCCCCCAGCAATGAGGGCT +
Preference number: 2 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGASRSKA*PPAMRA
Trigger: AGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGA...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp GACCAGGTCGGTCATCTGTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCCATCGGTACCGAGCCTaGCTCAGGGGCAGGCCGAGG +
Preference number: 2 (lower is better)
Translates to: DQVGHLCPYHLQQASNLPHRYRA*LRGRPR
Trigger: CCTCGGCCTGCCCCTGAGCCAGGCTCGGTACCGATG...GGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACACAGATGACCGACCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTGAAACCAGACGGGACTaGCATGGTCCACAGTTCTTG +
Preference number: 2 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRAETRRD*HGPQFL
Trigger: CAAGAACTGTGGACCATGCCAGTCCCGTCTGGTTTC...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GAAGTCTTCCAGGATTCCCAGGCAGGAATGATGGCTCCCTGTCCCTGTAGCTCCGCGGCCGAGGGCGCCTaGAGCTATTTGGGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: EVFQDSQAGMMAPCPCSSAAEGA*SYLGAW
Trigger: CCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC...GGAGCTACAGGGACAGGGAGCCATCATTCCTGCCTGGGAATCCTGGAAGACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp CACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTGAAGCCAGGCTCTCCTCCTaGTGCTGGAAGCAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: HRGIVSGRVGRTVEGEGEARLSS*CWKQRR
Trigger: CCTCCTCTGCTTCCAGCACCAGGAGGAGAGCCTGGC...TTCACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563007.5
ENST00000564907.5
ENST00000565539.5
ENST00000568645.5
3UTR-3UTR CCA 90 bp GAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGGCAGGAAGATGGCACTaGCTCGGCAGCCAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: ELTMMGGRGRLELFGGLEAGRWH*LGSQPQ
Trigger: CTGAGGCTGGCTGCCGAGCCAGTGCCATCTTCCTGC...CTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR TCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCACCTGAGGTTAAAATaGCAGAGGATGCAGAGTGCC +
Preference number: 2 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRAHLRLK*QRMQSA
Trigger: GGCACTCTGCATCCTCTGTCATTTTAACCTCAGGTG...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR TCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGTGTGCTTGGTCAGGGTaGGCAAGGGCAATGCAGCTC +
Preference number: 2 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRCAWSG*ARAMQL
Trigger: GAGCTGCATTGCCCTTGCTCACCCTGACCAAGCACA...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp GACCACGAGAGACAGAGCAACTGGAGCCACATTTCTGTCCCAGGCAGGGGCACAGGGCCACAGGCAGTGTaGGACGAGGCCGAATCTCTG +
Preference number: 2 (lower is better)
Translates to: DHERQSNWSHISVPGRGTGPQAV*DEAESL
Trigger: CAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCC...TGTGCCCCTGCCTGGGACAGAAATGTGGCTCCAGTTGCTCTGTCTCTCGTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR GCA 90 bp CAACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGGGGCCACAGGCAGTGTaGGACGAGGCCGAATCTCTG +
Preference number: 2 (lower is better)
Translates to: QRPISPWSLGFPKSAADWGPQAV*DEAESL
Trigger: CAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCC...CCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR GCA 90 bp GTCCACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTAGGCTCTCCTCCTGGTaGTGGAAGCAGAGGAGGCTA +
Preference number: 2 (lower is better)
Translates to: VHRGIVSGRVGRTVEGEGRLSSW*WKQRRL
Trigger: TAGCCTCCTCTGCTTCCAGCACCAGGAGGAGAGCCT...ACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563007.5
ENST00000564907.5
ENST00000565539.5
ENST00000568645.5
3UTR-3UTR GCA 90 bp GACCACGAGAGACAGAGCAACTGGAGCCACATTTCTGTCCCAGGCAGGGGCACATTCGACTCCAGGCTCTaGAACTGCTGGCTGGCGGGG +
Preference number: 2 (lower is better)
Translates to: DHERQSNWSHISVPGRGTFDSRL*NCWLAG
Trigger: CCCCGCCAGCCAGCAGTTGCAGAGCCTGGAGTCGAA...TGTGCCCCTGCCTGGGACAGAAATGTGGCTCCAGTTGCTCTGTCTCTCGTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR GCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCAAGCCAGGGACATAGGTaGCAAAGACCTCCACCACGA +
Preference number: 2 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGASQGHR*QRPPPR
Trigger: TCGTGGTGGAGGTCTTTGGCACCTATGTCCCTGGCT...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CCA 90 bp GAGTTCTTGCTTCACGCACGCCTCACATACCAGACTGAATGTTGGCAGGAGGAGAAGTCTGCGGCTGACTaGCCTGGGGCTGGGCCGGGC +
Preference number: 2 (lower is better)
Translates to: EFLLHARLTYQTECWQEEKSAAD*PGAGPG
Trigger: GCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTT...CTCCTCCTGCCAACATTCAGTCTGGTATGTGAGGCGTGCGTGAAGCAAGAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GGCCAGGGCAGAGACGACACAGCCCACGTAGGAGAGGAGGCTCAGGTAGTGCTTGGGTTGGGACAGATGTaGGGACAGTACCCTAGGCAG +
Preference number: 2 (lower is better)
Translates to: GQGRDDTAHVGEEAQVVLGLGQM*GQYPRQ
Trigger: CTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCC...AAGCACTACCTGAGCCTCCTCTCCTACGTGGGCTGTGTCGTCTCTGCCCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CCA 90 bp GCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAGGAGATCAAGATCCAAGGCCTaGCCCCCAGCAATGAGGGCT +
Preference number: 2 (lower is better)
Translates to: AAEGAWSYLGAWREPLRRSRSKA*PPAMRA
Trigger: AGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGA...TCTCCTAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GACCAGGTCGGTCATCTGTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCCCTGAAGGTCTGCCCTaGGCCCCATTCGCCCTGGGT +
Preference number: 2 (lower is better)
Translates to: DQVGHLCPYHLQQASNLPPEGLP*APFALG
Trigger: ACCCAGGGCGAATGGGGCCCAGGGCAGACCTTCAGG...GGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACACAGATGACCGACCTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp AGGGACATAGGTGCCAAAGACCTCCACCACGAGTCGGTAGAGGTTGTACCCCTCTGGATGTGCAGGTCCTaGAGGCCGGCTGTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: RDIGAKDLHHESVEVVPLWMCRS*RPAVGW
Trigger: CCAGCCCACAGCCGGCCTCCAGGACCTGCACATCCA...GAGGGGTACAACCTCTACCGACTCGTGGTGGAGGTCTTTGGCACCTATGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR TCA 90 bp GAGTGCCCTCAGGGTGACCACGAGAGACAGAGCAACTGGAGCCACATTTCTGTCCCCGTGGGAGCTGAGTaGGAGCCGAGTAGTCCCCAA +
Preference number: 2 (lower is better)
Translates to: ECPQGDHERQSNWSHISVPVGAE*EPSSPQ
Trigger: TTGGGGACTACTCGGCTCTCACTCAGCTCCCACGGG...GACAGAAATGTGGCTCCAGTTGCTCTGTCTCTCGTGGTCACCCTGAGGGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR TCA 90 bp GAAGTCTTCCAGGATTCCCAGGCAGGAATGATGGCTCCCTGTCCCTGTAGCTCCATGGCGGCGCACTTCTaGGTCCCGTGGGAGCTGAGT +
Preference number: 2 (lower is better)
Translates to: EVFQDSQAGMMAPCPCSSMAAHF*VPWELS
Trigger: ACTCAGCTCCCACGGGACTCAGAAGTGCGCCGCCAT...GGAGCTACAGGGACAGGGAGCCATCATTCCTGCCTGGGAATCCTGGAAGACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR TCA 90 bp GCCATAGTTGTCCACATCCACCAGGGCCACCAGCGTCACCAGAAAGATGGGGAAATGGCGGCGCACTTCTaGGTCCCGTGGGAGCTGAGT +
Preference number: 2 (lower is better)
Translates to: AIVVHIHQGHQRHQKDGEMAAHF*VPWELS
Trigger: ACTCAGCTCCCACGGGACTCAGAAGTGCGCCGCCAT...TTCCCCATCTTTCTGGTGACGCTGGTGGCCCTGGTGGATGTGGACAACTATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR GCA 90 bp AGCCACATTTCTGTCCCAGGCAGGGGCACAGGATTAAGGATGTGCCAGACCCTCGGGCCACAGGCAGTGTaGGACGAGGCCGAATCTCTG +
Preference number: 2 (lower is better)
Translates to: SHISVPGRGTGLRMCQTLGPQAV*DEAESL
Trigger: CAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCC...GAGGGTCTGGCACATCCTTAATCCTGTGCCCCTGCCTGGGACAGAAATGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR GCA 90 bp GACCAGGTCGGTCATCTGTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCGGGCCACAGGCAGTGTaGGACGAGGCCGAATCTCTG +
Preference number: 2 (lower is better)
Translates to: DQVGHLCPYHLQQASNLPGPQAV*DEAESL
Trigger: CAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCC...GGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACACAGATGACCGACCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp TGTCCCAGGCAGGGGCACAGGATTAAGGATGTGCCAGACCCTCAAGATCCAAGGGGGCCACAGGCAGTGTaGGACGAGGCCGAATCTCTG +
Preference number: 2 (lower is better)
Translates to: CPRQGHRIKDVPDPQDPRGPQAV*DEAESL
Trigger: CAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCC...CCTTGGATCTTGAGGGTCTGGCACATCCTTAATCCTGTGCCCCTGCCTGGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR GCA 90 bp GGTCAGGGTGAGCAAGGGCAATGCAGCTCATACAAAGGCCCAGATGGACAGAGGGGCGAGCTGCTGCTGTaGTCCTGGCAAAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: GQGEQGQCSSYKGPDGQRGELLL*SWQRAS
Trigger: AGAGGCCCTTTGCCAGGAGCACAGCAGCAGCTCGCC...CCTCTGTCCATCTGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp GGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCAAGGCTCTCCTCCTGGTaGTGGAAGCAGAGGAGGCTA +
Preference number: 2 (lower is better)
Translates to: GVRPPWQRPISPWSLGFPRLSSW*WKQRRL
Trigger: TAGCCTCCTCTGCTTCCAGCACCAGGAGGAGAGCCT...TGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CCA 90 bp GACCAGGTCGGTCATCTGTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCGACCAGGCCTCCAGCTaGGTTGGGACAGATGTGGGG +
Preference number: 2 (lower is better)
Translates to: DQVGHLCPYHLQQASNLPDQASS*VGTDVG
Trigger: CCCCACATCTGTCCCAACCCAGCTGGAGGCCTGGTC...GGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACACAGATGACCGACCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp AACCAGACGGGACTGGCATGGTCCACAGTTCTTGCCACAAGAGGGCTTCAGGAGGACCAGGCCTCCAGCTaGGTTGGGACAGATGTGGGG +
Preference number: 2 (lower is better)
Translates to: NQTGLAWSTVLATRGLQEDQASS*VGTDVG
Trigger: CCCCACATCTGTCCCAACCCAGCTGGAGGCCTGGTC...CTCCTGAAGCCCTCTTGTGGCAAGAACTGTGGACCATGCCAGTCCCGTCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp AGCCACATTTCTGTCCCAGGCAGGGGCACAGGATTAAGGATGTGCCAGACCCTCGACCAGGCCTCCAGCTaGGTTGGGACAGATGTGGGG +
Preference number: 2 (lower is better)
Translates to: SHISVPGRGTGLRMCQTLDQASS*VGTDVG
Trigger: CCCCACATCTGTCCCAACCCAGCTGGAGGCCTGGTC...GAGGGTCTGGCACATCCTTAATCCTGTGCCCCTGCCTGGGACAGAAATGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp GGTCATCTGTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCGTGTGTGTTCATCGGTACCGAGCCTaGCTCAGGGGCAGGCCGAGG +
Preference number: 2 (lower is better)
Translates to: GHLCPYHLQQASNLPVCVHRYRA*LRGRPR
Trigger: CCTCGGCCTGCCCCTGAGCCAGGCTCGGTACCGATG...AACACACACGGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACACAGATGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GTTTGTTGGACAGAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCTATTTCATCGGTACCGAGCCTaGCTCAGGGGCAGGCCGAGG +
Preference number: 2 (lower is better)
Translates to: VCWTELTMMGGRGRLELFHRYRA*LRGRPR
Trigger: CCTCGGCCTGCCCCTGAGCCAGGCTCGGTACCGATG...AAATAGCTCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTCTGTCCAACAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GCAGGAAGCTCGTGTCCAGCAGGAAGACGGCCAGCAGCAGGTTCATGTGCACCTCTTGGAGTGGTGGGATaGAAACCAGACGGGACTGGC +
Preference number: 2 (lower is better)
Translates to: AGSSCPAGRRPAAGSCAPLGVVG*KPDGTG
Trigger: GCCAGTCCCGTCTGGTTTCCATCCCACCACTCCAAG...AGGTGCACATGAACCTGCTGCTGGCCGTCTTCCTGCTGGACACGAGCTTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR CCA 90 bp GCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAGGAGACAGTCCTTGGAGTGGTaGGATGGAAACCAGACGGGA +
Preference number: 2 (lower is better)
Translates to: AAEGAWSYLGAWREPLRRQSLEW*DGNQTG
Trigger: TCCCGTCTGGTTTCCATCCCACCACTCCAAGGACTG...TCTCCTAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp AGCCACATTTCTGTCCCAGGCAGGGGCACAGGATTAAGGATGTGCCAGACCCTCGCCAGGCTCTCCTCCTaGTGCTGGAAGCAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: SHISVPGRGTGLRMCQTLARLSS*CWKQRR
Trigger: CCTCCTCTGCTTCCAGCACCAGGAGGAGAGCCTGGC...GAGGGTCTGGCACATCCTTAATCCTGTGCCCCTGCCTGGGACAGAAATGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR CCA 90 bp GCAGGAAGCTCGTGTCCAGCAGGAAGACGGCCAGCAGCAGGTTCATGTGCACCTCGGCCTTTCGTCCTCTaGAAGAGTGTTCGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: AGSSCPAGRRPAAGSCAPRPFVL*KSVRGS
Trigger: GCTGCCTCGAACACTCTTCCAGAGGACGAAAGGCCG...AGGTGCACATGAACCTGCTGCTGGCCGTCTTCCTGCTGGACACGAGCTTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCGGGCTGCTCAATGTaGGGTCTTCAACCCAGAACA +
Preference number: 2 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRPGCSM*GLQPRT
Trigger: TGTTCTGGGTTGAAGACCCCACATTGAGCAGCCCGG...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR TCA 90 bp CCTCTGAGGCGTGTGCTTGGTCAGGGTGAGCAAGGGCAATGCAGCTCATACAAACCCGTGGGAGCTGAGTaGGAGCCGAGTAGTCCCCAA +
Preference number: 2 (lower is better)
Translates to: PLRRVLGQGEQGQCSSYKPVGAE*EPSSPQ
Trigger: TTGGGGACTACTCGGCTCTCACTCAGCTCCCACGGG...TTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACCAAGCACACGCCTCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR TCA 90 bp GAGAGACAGAGCAACTGGAGCCACATTTCTGTCCCAGGCAGGGGCACAGGATTACCCGTGGGAGCTGAGTaGGAGCCGAGTAGTCCCCAA +
Preference number: 2 (lower is better)
Translates to: ERQSNWSHISVPGRGTGLPVGAE*EPSSPQ
Trigger: TTGGGGACTACTCGGCTCTCACTCAGCTCCCACGGG...TAATCCTGTGCCCCTGCCTGGGACAGAAATGTGGCTCCAGTTGCTCTGTCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR TCA 90 bp CACATTTCTGTCCCAGGCAGGGGCACAGGATTAAGGATGTGCCAGACCCTCAAGATGGCGGCGCACTTCTaGGTCCCGTGGGAGCTGAGT +
Preference number: 2 (lower is better)
Translates to: HISVPGRGTGLRMCQTLKMAAHF*VPWELS
Trigger: ACTCAGCTCCCACGGGACTCAGAAGTGCGCCGCCAT...CTTGAGGGTCTGGCACATCCTTAATCCTGTGCCCCTGCCTGGGACAGAAATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR TCA 90 bp CTGAGGGCCCCTCTGAGGCGTGTGCTTGGTCAGGGTGAGCAAGGGCAATGCAGCCACCTGAGGTTAAAATaGCAGAGGATGCAGAGTGCC +
Preference number: 2 (lower is better)
Translates to: LRAPLRRVLGQGEQGQCSHLRLK*QRMQSA
Trigger: GGCACTCTGCATCCTCTGTCATTTTAACCTCAGGTG...GCTGCATTGCCCTTGCTCACCCTGACCAAGCACACGCCTCAGAGGGGCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR TCA 90 bp GAGTTCTTGCTTCACGCACGCCTCACATACCAGACTGAATGTTGGCAGGAGGAGGGGGACCCCCAGCTGTaGACGAAGGAGCAAGGAGGC +
Preference number: 2 (lower is better)
Translates to: EFLLHARLTYQTECWQEEGDPQL*TKEQGG
Trigger: GCCTCCTTGCTCCTTCGTTCACAGCTGGGGGTCCCC...CTCCTCCTGCCAACATTCAGTCTGGTATGTGAGGCGTGCGTGAAGCAAGAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR TCA 90 bp ATCTCTCCATGGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTTGTGCTTGGTCAGGGTaGGCAAGGGCAATGCAGCTC +
Preference number: 2 (lower is better)
Translates to: ISPWSLGFPKSAADWPGACAWSG*ARAMQL
Trigger: GAGCTGCATTGCCCTTGCTCACCCTGACCAAGCACA...AGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR TCA 90 bp GGCAGCAGCACCGAGTACTCCATGATCTCGCTCTGCTCCTCCTCCTGCCGGGAGACACCATGTCCCCCATaGATCTCACAGAGGTCAGTT +
Preference number: 2 (lower is better)
Translates to: GSSTEYSMISLCSSSCRETPCPP*ISQRSV
Trigger: AACTGACCTCTGTGAGATTCATGGGGGACATGGTGT...CTCCCGGCAGGAGGAGGAGCAGAGCGAGATCATGGAGTACTCGGTGCTGCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR TCA 90 bp CACGCCTCACATACCAGACTGAATGTTGGCAGGAGGAGTGACCAGGTCGGTCATTCCACACCGTGGCGTTaGTCCGGTCCTCCTCGAAGG +
Preference number: 2 (lower is better)
Translates to: HASHTRLNVGRRSDQVGHSTPWR*SGPPRR
Trigger: CCTTCGAGGAGGACCGGATCAACGCCACGGTGTGGA...ATGACCGACCTGGTCACTCCTCCTGCCAACATTCAGTCTGGTATGTGAGGCGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR GCA 90 bp GATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAACGAGGCCGAATCTCTaGTTCATCACATGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: DGRPRAPGAIWGLGENLLTRPNL*FITWAG
Trigger: ACCTGCCCATGTGATGAAGCAGAGATTCGGCCTCGT...TAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp TGGACAGAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGACAGGATTAAGGATGTaGCAGACCCTCAAGATCCAA +
Preference number: 2 (lower is better)
Translates to: WTEGPSPAHASVPSLAQGTGLRM*QTLKIQ
Trigger: TTGGATCTTGAGGGTCTGGCACATCCTTAATCCTGT...CCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTCTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp CCTCTGAGGCGTGTGCTTGGTCAGGGTGAGCAAGGGCAATGCAGCTCATACAAAGGCGAGCTGCTGCTGTaGTCCTGGCAAAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: PLRRVLGQGEQGQCSSYKGELLL*SWQRAS
Trigger: AGAGGCCCTTTGCCAGGAGCACAGCAGCAGCTCGCC...TTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACCAAGCACACGCCTCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp GTGGCTAGCATGGCCATGTTGAACAGAAACACCAGGCTGAAGAGGCCCAGGTTGCTCTGCTCCTCCTCCTaGCGGGAGTGGATGTGCAGG +
Preference number: 2 (lower is better)
Translates to: VASMAMLNRNTRLKRPRLLCSSS*REWMCR
Trigger: CCTGCACATCCACTCCCGGCAGGAGGAGGAGCAGAG...CAACCTGGGCCTCTTCAGCCTGGTGTTTCTGTTCAACATGGCCATGCTAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR GCA 90 bp GCAGGAAGCTCGTGTCCAGCAGGAAGACGGCCAGCAGCAGGTTCATGTGCACCTTTCGGCTGTAGCTGGTaGTGGAAAGTGAGCACCACG +
Preference number: 2 (lower is better)
Translates to: AGSSCPAGRRPAAGSCAPFGCSW*WKVSTT
Trigger: CGTGGTGCTCACTTTCCAGCACCAGCTACAGCCGAA...AGGTGCACATGAACCTGCTGCTGGCCGTCTTCCTGCTGGACACGAGCTTCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR GCA 90 bp GGTCAGGGTGAGCAAGGGCAATGCAGCTCATACAAAGGCCCAGATGGACAGAGGCCAGCACTGCTCCAATaGCCCGGGCTGCTCAATGTG +
Preference number: 2 (lower is better)
Translates to: GQGEQGQCSSYKGPDGQRPALLQ*PGLLNV
Trigger: CACATTGAGCAGCCCGGGGCATTGGAGCAGTGCTGG...CCTCTGTCCATCTGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR GCA 90 bp GCCATAGTTGTCCACATCCACCAGGGCCACCAGCGTCACCAGAAAGATGGGGAACCAGCACTGCTCCAATaGCCCGGGCTGCTCAATGTG +
Preference number: 2 (lower is better)
Translates to: AIVVHIHQGHQRHQKDGEPALLQ*PGLLNV
Trigger: CACATTGAGCAGCCCGGGGCATTGGAGCAGTGCTGG...TTCCCCATCTTTCTGGTGACGCTGGTGGCCCTGGTGGATGTGGACAACTATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CCA 90 bp GAGAGCCGAGTAGTCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCTCTCTCCATGGTCGTTaGGCTTTCCAAAGTCTGCGG +
Preference number: 2 (lower is better)
Translates to: ESRVVPKANSKAQPGSPSSLHGR*AFQSLR
Trigger: CCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGA...GGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGACTACTCGGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGTCTCTCCATGGTCGTTaGGCTTTCCAAAGTCTGCGG +
Preference number: 2 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRSLHGR*AFQSLR
Trigger: CCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGA...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp GGAGCTGATGAGCAGCCACGCTCTCAGCATGGGGTTGGGAGTCTCCAGTTCGCCTCTCTCCATGGTCGTTaGGCTTTCCAAAGTCTGCGG +
Preference number: 2 (lower is better)
Translates to: GADEQPRSQHGVGSLQFASLHGR*AFQSLR
Trigger: CCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGA...GGCGAACTGGAGACTCCCAACCCCATGCTGAGAGCGTGGCTGCTCATCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562631.7
ENST00000568909.5
3UTR-3UTR CCA 90 bp GGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACTTCTGAGTCCCTCTCTCCATGGTCGTTaGGCTTTCCAAAGTCTGCGG +
Preference number: 2 (lower is better)
Translates to: GQMWGQYPRQHGGALLSPSLHGR*AFQSLR
Trigger: CCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGA...GGGACTCAGAAGTGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp AGCCACATTTCTGTCCCAGGCAGGGGCACAGGATTAAGGATGTGCCAGACCCTCGGAGTCCGTCCACCATaGCAACGGCCCATCTCTCCA +
Preference number: 2 (lower is better)
Translates to: SHISVPGRGTGLRMCQTLGVRPP*QRPISP
Trigger: TGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCC...GAGGGTCTGGCACATCCTTAATCCTGTGCCCCTGCCTGGGACAGAAATGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp GAGAGACAGAGCAACTGGAGCCACATTTCTGTCCCAGGCAGGGGCACAGGATTAGACCAGGCCTCCAGCTaGGTTGGGACAGATGTGGGG +
Preference number: 2 (lower is better)
Translates to: ERQSNWSHISVPGRGTGLDQASS*VGTDVG
Trigger: CCCCACATCTGTCCCAACCCAGCTGGAGGCCTGGTC...TAATCCTGTGCCCCTGCCTGGGACAGAAATGTGGCTCCAGTTGCTCTGTCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp AGACAGAGCAACTGGAGCCACATTTCTGTCCCAGGCAGGGGCACAGGATTAAGGGACCAGGCCTCCAGCTaGGTTGGGACAGATGTGGGG +
Preference number: 2 (lower is better)
Translates to: RQSNWSHISVPGRGTGLRDQASS*VGTDVG
Trigger: CCCCACATCTGTCCCAACCCAGCTGGAGGCCTGGTC...CCTTAATCCTGTGCCCCTGCCTGGGACAGAAATGTGGCTCCAGTTGCTCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCAGAGAGACAGAGCAACTaGAGCCACATTTCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGAERQSN*SHISVP
Trigger: TGGGACAGAAATGTGGCTCCAGTTGCTCTGTCTCTC...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGATACAAAGGCCCAGATaGACAGAGGGACCTAGCCCA +
Preference number: 2 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRIQRPR*TEGPSP
Trigger: TGGGCTAGGTCCCTCTGTCCATCTGGGCCTTTGTAT...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAGGAGAATACAAAGGCCCAGATaGACAGAGGGACCTAGCCCA +
Preference number: 2 (lower is better)
Translates to: AAEGAWSYLGAWREPLRRIQRPR*TEGPSP
Trigger: TGGGCTAGGTCCCTCTGTCCATCTGGGCCTTTGTAT...TCTCCTAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGGAAACCAGACGGGACTaGCATGGTCCACAGTTCTTG +
Preference number: 2 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRETRRD*HGPQFL
Trigger: CAAGAACTGTGGACCATGCCAGTCCCGTCTGGTTTC...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GAGCAGGAAGCTCGTGTCCAGCAGGAAGACGGCCAGCAGCAGGTTCATGTGCACCAGTCCTTGGAGTGGTaGGATGGAAACCAGACGGGA +
Preference number: 2 (lower is better)
Translates to: EQEARVQQEDGQQQVHVHQSLEW*DGNQTG
Trigger: TCCCGTCTGGTTTCCATCCCACCACTCCAAGGACTG...GTGCACATGAACCTGCTGCTGGCCGTCTTCCTGCTGGACACGAGCTTCCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR CCA 90 bp CACAGCCAAGATGATGGGGCCATAGTTGTCCACATCCACCAGGGCCACCAGCGTGCGCCTGGAGCTATTTaGGGGCTTGGAGAGAACCTC +
Preference number: 2 (lower is better)
Translates to: HSQDDGAIVVHIHQGHQRAPGAI*GLGENL
Trigger: GAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGC...ACGCTGGTGGCCCTGGTGGATGTGGACAACTATGGCCCCATCATCTTGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR TCA 90 bp GATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTACACCTGAGGTTAAAATaGCAGAGGATGCAGAGTGCC +
Preference number: 2 (lower is better)
Translates to: DGRPRAPGAIWGLGENLLHLRLK*QRMQSA
Trigger: GGCACTCTGCATCCTCTGTCATTTTAACCTCAGGTG...TAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR TCA 90 bp GACCAGGTCGGTCATCTGTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCTGTGCTTGGTCAGGGTaGGCAAGGGCAATGCAGCTC +
Preference number: 2 (lower is better)
Translates to: DQVGHLCPYHLQQASNLPCAWSG*ARAMQL
Trigger: GAGCTGCATTGCCCTTGCTCACCCTGACCAAGCACA...GGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACACAGATGACCGACCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR TCA 90 bp GCAGAGTGCCCTCAGGGTGACCACGAGAGACAGAGCAACTGGAGCCACATTTCTTGTGCTTGGTCAGGGTaGGCAAGGGCAATGCAGCTC +
Preference number: 2 (lower is better)
Translates to: AECPQGDHERQSNWSHISCAWSG*ARAMQL
Trigger: GAGCTGCATTGCCCTTGCTCACCCTGACCAAGCACA...AGAAATGTGGCTCCAGTTGCTCTGTCTCTCGTGGTCACCCTGAGGGCACTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR TCA 90 bp GGAGCTGATGAGCAGCCACGCTCTCAGCATGGGGTTGGGAGTCTCCAGTTCGCCCTTCAAGGTCAAGATTaGACGCTGACTCCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: GADEQPRSQHGVGSLQFALQGQD*TLTPAG
Trigger: TCCTGCAGGAGTCAGCGTTCAATCTTGACCTTGAAG...GGCGAACTGGAGACTCCCAACCCCATGCTGAGAGCGTGGCTGCTCATCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562631.7
ENST00000568909.5
3UTR-3UTR TCA 90 bp GCAGAGTGCCCTCAGGGTGACCACGAGAGACAGAGCAACTGGAGCCACATTTCTCCATGGCGCTCAGCTTaGGTAGGTAGCCAGGGACAT +
Preference number: 2 (lower is better)
Translates to: AECPQGDHERQSNWSHISPWRSA*VGSQGH
Trigger: ATGTCCCTGGCTACCTACTCAAGCTGAGCGCCATGG...AGAAATGTGGCTCCAGTTGCTCTGTCTCTCGTGGTCACCCTGAGGGCACTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR GCA 90 bp CATTTCTGTCCCAGGCAGGGGCACAGGATTAAGGATGTGCCAGACCCTCAAGATGGGCCACAGGCAGTGTaGGACGAGGCCGAATCTCTG +
Preference number: 2 (lower is better)
Translates to: HFCPRQGHRIKDVPDPQDGPQAV*DEAESL
Trigger: CAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCC...ATCTTGAGGGTCTGGCACATCCTTAATCCTGTGCCCCTGCCTGGGACAGAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR GCA 90 bp TTGGTCAGGGTGAGCAAGGGCAATGCAGCTCATACAAAGGCCCAGATGGACAGAGGCGAGCTGCTGCTGTaGTCCTGGCAAAGGGCCTCT +
Preference number: 2 (lower is better)
Translates to: LVRVSKGNAAHTKAQMDRGELLL*SWQRAS
Trigger: AGAGGCCCTTTGCCAGGAGCACAGCAGCAGCTCGCC...TCTGTCCATCTGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp ATCTCTCCATGGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTTTCGGCTGTAGCTGGTaGTGGAAAGTGAGCACCACG +
Preference number: 2 (lower is better)
Translates to: ISPWSLGFPKSAADWPGAFGCSW*WKVSTT
Trigger: CGTGGTGCTCACTTTCCAGCACCAGCTACAGCCGAA...AGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR GCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCAACCCAGAACACACATTaGAGAGTCACATTCTTCGGC +
Preference number: 2 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGATQNTH*RVTFFG
Trigger: GCCGAAGAATGTGACTCTGCAATGTGTGTTCTGGGT...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR GCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCGACAAGCTGGAAGGTaGCAGAAGCAAAGGAGAAGA +
Preference number: 2 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRRQAGR*QKQRRR
Trigger: TCTTCTCCTTTGCTTCTGGCACCTTCCAGCTTGTCG...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CCA 90 bp GCCCTAGGCCAGTGTCACCAGAGGAGGTCAGTCTCAGTCCTTGGAGTGGTGGGATCTCTCCATGGTCGTTaGGCTTTCCAAAGTCTGCGG +
Preference number: 2 (lower is better)
Translates to: ALGQCHQRRSVSVLGVVGSLHGR*AFQSLR
Trigger: CCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGA...TCCCACCACTCCAAGGACTGAGACTGACCTCCTCTGGTGACACTGGCCTAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp TCTGTCCCAGGCAGGGGCACAGGATTAAGGATGTGCCAGACCCTCAAGATCCAAGGAGTCCGTCCACCATaGCAACGGCCCATCTCTCCA +
Preference number: 2 (lower is better)
Translates to: SVPGRGTGLRMCQTLKIQGVRPP*QRPISP
Trigger: TGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCC...TTGGATCTTGAGGGTCTGGCACATCCTTAATCCTGTGCCCCTGCCTGGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp TGTCCCAGGCAGGGGCACAGGATTAAGGATGTGCCAGACCCTCAAGATCCAAGGGGGTTGGGACAGATGTaGGGACAGTACCCTAGGCAG +
Preference number: 2 (lower is better)
Translates to: CPRQGHRIKDVPDPQDPRGLGQM*GQYPRQ
Trigger: CTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCC...CCTTGGATCTTGAGGGTCTGGCACATCCTTAATCCTGTGCCCCTGCCTGGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp GAAGTCTTCCAGGATTCCCAGGCAGGAATGATGGCTCCCTGTCCCTGTAGCTCCGGGTTGGGACAGATGTaGGGACAGTACCCTAGGCAG +
Preference number: 2 (lower is better)
Translates to: EVFQDSQAGMMAPCPCSSGLGQM*GQYPRQ
Trigger: CTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCC...GGAGCTACAGGGACAGGGAGCCATCATTCCTGCCTGGGAATCCTGGAAGACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GGTCAGGGTGAGCAAGGGCAATGCAGCTCATACAAAGGCCCAGATGGACAGAGGGGGTTGGGACAGATGTaGGGACAGTACCCTAGGCAG +
Preference number: 2 (lower is better)
Translates to: GQGEQGQCSSYKGPDGQRGLGQM*GQYPRQ
Trigger: CTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCC...CCTCTGTCCATCTGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GGTCATCTGTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCGTGTGTGTTGACCAGGCCTCCAGCTaGGTTGGGACAGATGTGGGG +
Preference number: 2 (lower is better)
Translates to: GHLCPYHLQQASNLPVCVDQASS*VGTDVG
Trigger: CCCCACATCTGTCCCAACCCAGCTGGAGGCCTGGTC...AACACACACGGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACACAGATGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GAGTGCCCTCAGGGTGACCACGAGAGACAGAGCAACTGGAGCCACATTTCTGTCTCAAGATCCAAGGCCTaGCCCCCAGCAATGAGGGCT +
Preference number: 2 (lower is better)
Translates to: ECPQGDHERQSNWSHISVSRSKA*PPAMRA
Trigger: AGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGA...GACAGAAATGTGGCTCCAGTTGCTCTGTCTCTCGTGGTCACCCTGAGGGCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGGAGAGACAGAGCAACTaGAGCCACATTTCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRERQSN*SHISVP
Trigger: TGGGACAGAAATGTGGCTCCAGTTGCTCTGTCTCTC...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp GAAGTCTTCCAGGATTCCCAGGCAGGAATGATGGCTCCCTGTCCCTGTAGCTCCCTTGGAGTGGTGGGATaGAAACCAGACGGGACTGGC +
Preference number: 2 (lower is better)
Translates to: EVFQDSQAGMMAPCPCSSLGVVG*KPDGTG
Trigger: GCCAGTCCCGTCTGGTTTCCATCCCACCACTCCAAG...GGAGCTACAGGGACAGGGAGCCATCATTCCTGCCTGGGAATCCTGGAAGACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GGTCAGGGTGAGCAAGGGCAATGCAGCTCATACAAAGGCCCAGATGGACAGAGGGCGCCTGGAGCTATTTaGGGGCTTGGAGAGAACCTC +
Preference number: 2 (lower is better)
Translates to: GQGEQGQCSSYKGPDGQRAPGAI*GLGENL
Trigger: GAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGC...CCTCTGTCCATCTGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp ATCTCTCCATGGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTAACTGGCTGAGCAGCTaGAGGTCCCTTTTGAGCTCG +
Preference number: 2 (lower is better)
Translates to: ISPWSLGFPKSAADWPGANWLSS*RSLLSS
Trigger: CGAGCTCAAAAGGGACCTCCAGCTGCTCAGCCAGTT...AGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CCA 90 bp GTTTGTTGGACAGAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCTATTTTCCTCCTGCCGGGAGTaGATGTGCAGGTCCTGGAGG +
Preference number: 2 (lower is better)
Translates to: VCWTELTMMGGRGRLELFSSCRE*MCRSWR
Trigger: CCTCCAGGACCTGCACATCCACTCCCGGCAGGAGGA...AAATAGCTCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTCTGTCCAACAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR CCA 90 bp GCCATAGTTGTCCACATCCACCAGGGCCACCAGCGTCACCAGAAAGATGGGGAAAGAAGTGCAGGAAGATaGCACTGGCTCGGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: AIVVHIHQGHQRHQKDGERSAGR*HWLGSQ
Trigger: CTGGCTGCCGAGCCAGTGCCATCTTCCTGCACTTCT...TTCCCCATCTTTCTGGTGACGCTGGTGGCCCTGGTGGATGTGGACAACTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR CAA 90 bp TCCCTACCACCTACAACAGGCCAGCAATCTACCCGTGTGTGTTTGTaGGACAGAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCT +
Preference number: 2 (lower is better)
Translates to: SLPPTTGQQSTRVCL*DRINHDGRPRAPGA
Trigger: AGCTCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTCTGTCCAACAAACACACACGGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR CAA 90 bp GTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCGTGTGTGTTaGTTGGACAGAATTAACCATGATGGGCGGCCGAGGGCGCCTGGA +
Preference number: 2 (lower is better)
Translates to: VSLPPTTGQQSTRVC*LDRINHDGRPRAPG
Trigger: TCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTCTGTCCAACAAACACACACGGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR TCA 90 bp GAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGCACCTGAGGTTAAAATaGCAGAGGATGCAGAGTGCC +
Preference number: 2 (lower is better)
Translates to: ELTMMGGRGRLELFGGLEHLRLK*QRMQSA
Trigger: GGCACTCTGCATCCTCTGTCATTTTAACCTCAGGTG...CTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp GCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAGGAGAGCAGGCCGAGGCTTGTaGAGTAGACAAACATTTACA +
Preference number: 2 (lower is better)
Translates to: AAEGAWSYLGAWREPLRRAGRGL*SRQTFT
Trigger: TGTAAATGTTTGTCTACTGCACAAGCCTCGGCCTGC...TCTCCTAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGGCAGGCCGAGGCTTGTaGAGTAGACAAACATTTACA +
Preference number: 2 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRAGRGL*SRQTFT
Trigger: TGTAAATGTTTGTCTACTGCACAAGCCTCGGCCTGC...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp TGGGAGCTGAGTGAGAGCCGAGTAGTCCCCAAGGCCAATTCAAAAGCCCAGCCCTCTCTCCATGGTCGTTaGGCTTTCCAAAGTCTGCGG +
Preference number: 2 (lower is better)
Translates to: WELSESRVVPKANSKAQPSLHGR*AFQSLR
Trigger: CCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGA...GGGCTGGGCTTTTGAATTGGCCTTGGGGACTACTCGGCTCTCACTCAGCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp CATTTCTGTCCCAGGCAGGGGCACAGGATTAAGGATGTGCCAGACCCTCAAGATGGAGTCCGTCCACCATaGCAACGGCCCATCTCTCCA +
Preference number: 2 (lower is better)
Translates to: HFCPRQGHRIKDVPDPQDGVRPP*QRPISP
Trigger: TGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCC...ATCTTGAGGGTCTGGCACATCCTTAATCCTGTGCCCCTGCCTGGGACAGAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp CACGCCTCACATACCAGACTGAATGTTGGCAGGAGGAGTGACCAGGTCGGTCATGGGTTGGGACAGATGTaGGGACAGTACCCTAGGCAG +
Preference number: 2 (lower is better)
Translates to: HASHTRLNVGRRSDQVGHGLGQM*GQYPRQ
Trigger: CTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCC...ATGACCGACCTGGTCACTCCTCCTGCCAACATTCAGTCTGGTATGTGAGGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GAGAGACAGAGCAACTGGAGCCACATTTCTGTCCCAGGCAGGGGCACAGGATTAGGGTTGGGACAGATGTaGGGACAGTACCCTAGGCAG +
Preference number: 2 (lower is better)
Translates to: ERQSNWSHISVPGRGTGLGLGQM*GQYPRQ
Trigger: CTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCC...TAATCCTGTGCCCCTGCCTGGGACAGAAATGTGGCTCCAGTTGCTCTGTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp GAGAGACAGAGCAACTGGAGCCACATTTCTGTCCCAGGCAGGGGCACAGGATTATCAAGATCCAAGGCCTaGCCCCCAGCAATGAGGGCT +
Preference number: 2 (lower is better)
Translates to: ERQSNWSHISVPGRGTGLSRSKA*PPAMRA
Trigger: AGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGA...TAATCCTGTGCCCCTGCCTGGGACAGAAATGTGGCTCCAGTTGCTCTGTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp AGACAGAGCAACTGGAGCCACATTTCTGTCCCAGGCAGGGGCACAGGATTAAGGTCAAGATCCAAGGCCTaGCCCCCAGCAATGAGGGCT +
Preference number: 2 (lower is better)
Translates to: RQSNWSHISVPGRGTGLRSRSKA*PPAMRA
Trigger: AGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGA...CCTTAATCCTGTGCCCCTGCCTGGGACAGAAATGTGGCTCCAGTTGCTCTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CCA 90 bp GAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGGAGAGACAGAGCAACTaGAGCCACATTTCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: ELTMMGGRGRLELFGGLEERQSN*SHISVP
Trigger: TGGGACAGAAATGTGGCTCCAGTTGCTCTGTCTCTC...CTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GCAGGAAGCTCGTGTCCAGCAGGAAGACGGCCAGCAGCAGGTTCATGTGCACCTGAGAGACAGAGCAACTaGAGCCACATTTCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: AGSSCPAGRRPAAGSCAPERQSN*SHISVP
Trigger: TGGGACAGAAATGTGGCTCCAGTTGCTCTGTCTCTC...AGGTGCACATGAACCTGCTGCTGGCCGTCTTCCTGCTGGACACGAGCTTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR CCA 90 bp GGTCAGGGTGAGCAAGGGCAATGCAGCTCATACAAAGGCCCAGATGGACAGAGGCAGACGGGACTGGCATaGTCCACAGTTCTTGCCACA +
Preference number: 2 (lower is better)
Translates to: GQGEQGQCSSYKGPDGQRQTGLA*STVLAT
Trigger: TGTGGCAAGAACTGTGGACCATGCCAGTCCCGTCTG...CCTCTGTCCATCTGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp CACGCCTCACATACCAGACTGAATGTTGGCAGGAGGAGTGACCAGGTCGGTCATGCGCCTGGAGCTATTTaGGGGCTTGGAGAGAACCTC +
Preference number: 2 (lower is better)
Translates to: HASHTRLNVGRRSDQVGHAPGAI*GLGENL
Trigger: GAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGC...ATGACCGACCTGGTCACTCCTCCTGCCAACATTCAGTCTGGTATGTGAGGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp CACGCCTCACATACCAGACTGAATGTTGGCAGGAGGAGTGACCAGGTCGGTCATTCCTGGAACAGGGCTTaGCTGCTGAAGTCCACCAGG +
Preference number: 2 (lower is better)
Translates to: HASHTRLNVGRRSDQVGHSWNRA*LLKSTR
Trigger: CCTGGTGGACTTCAGCAGCCAAGCCCTGTTCCAGGA...ATGACCGACCTGGTCACTCCTCCTGCCAACATTCAGTCTGGTATGTGAGGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR CAA 90 bp TGGTGCTGGAAAGTGAGCACCACGGGCTCCGTGAGGTTGGCTACTTaGGTGTTCTGTACCACAATCCCCAAGACCTTCTCACCCAGGACT +
Preference number: 2 (lower is better)
Translates to: WCWKVSTTGSVRLAT*VFCTTIPKTFSPRT
Trigger: AGTCCTGGGTGAGAAGGTCTTGGGGATTGTGGTACAGAACACCAAAGTAGCCAACCTCACGGAGCCCGTGGTGCTCACTTTCCAGCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR CAA 90 bp GGCTGTAGCTGGTGCTGGAAAGTGAGCACCACGGGCTCCGTGAGGTaGGCTACTTTGGTGTTCTGTACCACAATCCCCAAGACCTTCTCA +
Preference number: 2 (lower is better)
Translates to: GCSWCWKVSTTGSVR*ATLVFCTTIPKTFS
Trigger: TGAGAAGGTCTTGGGGATTGTGGTACAGAACACCAAAGTAGCCAACCTCACGGAGCCCGTGGTGCTCACTTTCCAGCACCAGCTACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR GCA 90 bp GAGTGCCCTCAGGGTGACCACGAGAGACAGAGCAACTGGAGCCACATTTCTGTCACGAGGCCGAATCTCTaGTTCATCACATGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: ECPQGDHERQSNWSHISVTRPNL*FITWAG
Trigger: ACCTGCCCATGTGATGAAGCAGAGATTCGGCCTCGT...GACAGAAATGTGGCTCCAGTTGCTCTGTCTCTCGTGGTCACCCTGAGGGCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp GAAGTCTTCCAGGATTCCCAGGCAGGAATGATGGCTCCCTGTCCCTGTAGCTCCACGAGGCCGAATCTCTaGTTCATCACATGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: EVFQDSQAGMMAPCPCSSTRPNL*FITWAG
Trigger: ACCTGCCCATGTGATGAAGCAGAGATTCGGCCTCGT...GGAGCTACAGGGACAGGGAGCCATCATTCCTGCCTGGGAATCCTGGAAGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp CCCGCTCCGGCCTTTCGTCCTCTGGAAGAGTGTTCGAGGCAGCAGCACCGAGTAACAGGATTAAGGATGTaGCAGACCCTCAAGATCCAA +
Preference number: 2 (lower is better)
Translates to: PAPAFRPLEECSRQQHRVTGLRM*QTLKIQ
Trigger: TTGGATCTTGAGGGTCTGGCACATCCTTAATCCTGT...TACTCGGTGCTGCTGCCTCGAACACTCTTCCAGAGGACGAAAGGCCGGAGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR GCA 90 bp GGTCAGGGTGAGCAAGGGCAATGCAGCTCATACAAAGGCCCAGATGGACAGAGGGGTGAGCAAGGGCAATaGAGCTCATACAAAGGCCCA +
Preference number: 2 (lower is better)
Translates to: GQGEQGQCSSYKGPDGQRGEQGQ*SSYKGP
Trigger: TGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACC...CCTCTGTCCATCTGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp GTTTGTTGGACAGAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCTATTTAGGCTCTCCTCCTGGTaGTGGAAGCAGAGGAGGCTA +
Preference number: 2 (lower is better)
Translates to: VCWTELTMMGGRGRLELFRLSSW*WKQRRL
Trigger: TAGCCTCCTCTGCTTCCAGCACCAGGAGGAGAGCCT...AAATAGCTCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTCTGTCCAACAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR GCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGGGAAATGACCCAAAATaGTTACGCCAGTTTGCTAGG +
Preference number: 2 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRGNDPK*LRQFAR
Trigger: CCTAGCAAACTGGCGTAAGCATTTTGGGTCATTTCC...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000562631.7
ENST00000568909.5
3UTR-3UTR CCA 90 bp GAGTGCCCTCAGGGTGACCACGAGAGACAGAGCAACTGGAGCCACATTTCTGTCTCTCTCCATGGTCGTTaGGCTTTCCAAAGTCTGCGG +
Preference number: 2 (lower is better)
Translates to: ECPQGDHERQSNWSHISVSLHGR*AFQSLR
Trigger: CCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGA...GACAGAAATGTGGCTCCAGTTGCTCTGTCTCTCGTGGTCACCCTGAGGGCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GACCAGGTCGGTCATCTGTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCTCTCTCCATGGTCGTTaGGCTTTCCAAAGTCTGCGG +
Preference number: 2 (lower is better)
Translates to: DQVGHLCPYHLQQASNLPSLHGR*AFQSLR
Trigger: CCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGA...GGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACACAGATGACCGACCTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp AACCAGACGGGACTGGCATGGTCCACAGTTCTTGCCACAAGAGGGCTTCAGGAGTCTCTCCATGGTCGTTaGGCTTTCCAAAGTCTGCGG +
Preference number: 2 (lower is better)
Translates to: NQTGLAWSTVLATRGLQESLHGR*AFQSLR
Trigger: CCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGA...CTCCTGAAGCCCTCTTGTGGCAAGAACTGTGGACCATGCCAGTCCCGTCTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp TTGGTCAGGGTGAGCAAGGGCAATGCAGCTCATACAAAGGCCCAGATGGACAGATCAAGATCCAAGGCCTaGCCCCCAGCAATGAGGGCT +
Preference number: 2 (lower is better)
Translates to: LVRVSKGNAAHTKAQMDRSRSKA*PPAMRA
Trigger: AGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGA...TCTGTCCATCTGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GTTTGTTGGACAGAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCTATTTTCAAGATCCAAGGCCTaGCCCCCAGCAATGAGGGCT +
Preference number: 2 (lower is better)
Translates to: VCWTELTMMGGRGRLELFSRSKA*PPAMRA
Trigger: AGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGA...AAATAGCTCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTCTGTCCAACAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GGTCAGGGTGAGCAAGGGCAATGCAGCTCATACAAAGGCCCAGATGGACAGAGGATACAAAGGCCCAGATaGACAGAGGGACCTAGCCCA +
Preference number: 2 (lower is better)
Translates to: GQGEQGQCSSYKGPDGQRIQRPR*TEGPSP
Trigger: TGGGCTAGGTCCCTCTGTCCATCTGGGCCTTTGTAT...CCTCTGTCCATCTGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GTTTGTTGGACAGAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCTATTTCTTGGAGTGGTGGGATaGAAACCAGACGGGACTGGC +
Preference number: 2 (lower is better)
Translates to: VCWTELTMMGGRGRLELFLGVVG*KPDGTG
Trigger: GCCAGTCCCGTCTGGTTTCCATCCCACCACTCCAAG...AAATAGCTCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTCTGTCCAACAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp CATTTCTGTCCCAGGCAGGGGCACAGGATTAAGGATGTGCCAGACCCTCAAGATGGATGCTTCAGGAACTaGCTGAGCAGCTGGAGGTCC +
Preference number: 2 (lower is better)
Translates to: HFCPRQGHRIKDVPDPQDGCFRN*LSSWRS
Trigger: GGACCTCCAGCTGCTCAGCCAGTTCCTGAAGCATCC...ATCTTGAGGGTCTGGCACATCCTTAATCCTGTGCCCCTGCCTGGGACAGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR CCA 90 bp GACCAGGTCGGTCATCTGTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCTTCTTCGGCTGTAGCTaGTGCTGGAAAGTGAGCACC +
Preference number: 2 (lower is better)
Translates to: DQVGHLCPYHLQQASNLPFFGCS*CWKVST
Trigger: GGTGCTCACTTTCCAGCACCAGCTACAGCCGAAGAA...GGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACACAGATGACCGACCTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR GCA 90 bp GAGAGACAGAGCAACTGGAGCCACATTTCTGTCCCAGGCAGGGGCACAGGATTAACGAGGCCGAATCTCTaGTTCATCACATGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: ERQSNWSHISVPGRGTGLTRPNL*FITWAG
Trigger: ACCTGCCCATGTGATGAAGCAGAGATTCGGCCTCGT...TAATCCTGTGCCCCTGCCTGGGACAGAAATGTGGCTCCAGTTGCTCTGTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR GCA 90 bp GCCCTAGGCCAGTGTCACCAGAGGAGGTCAGTCTCAGTCCTTGGAGTGGTGGGAACAGGATTAAGGATGTaGCAGACCCTCAAGATCCAA +
Preference number: 2 (lower is better)
Translates to: ALGQCHQRRSVSVLGVVGTGLRM*QTLKIQ
Trigger: TTGGATCTTGAGGGTCTGGCACATCCTTAATCCTGT...TCCCACCACTCCAAGGACTGAGACTGACCTCCTCTGGTGACACTGGCCTAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp ATCTCTCCATGGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGCACAGACACCAAGTTaGCATTTATCTTCCCCTGTG +
Preference number: 2 (lower is better)
Translates to: ISPWSLGFPKSAADWPGAAQTPS*HLSSPV
Trigger: CACAGGGGAAGATAAATGGCAACTTGGTGTCTGTGC...AGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562631.7
ENST00000568909.5
3UTR-3UTR CCA 90 bp GGTCATCTGTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCGTGTGTGTTCAGACGGGACTGGCATaGTCCACAGTTCTTGCCACA +
Preference number: 2 (lower is better)
Translates to: GHLCPYHLQQASNLPVCVQTGLA*STVLAT
Trigger: TGTGGCAAGAACTGTGGACCATGCCAGTCCCGTCTG...AACACACACGGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACACAGATGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR TCA 90 bp GAGTTCTTGCTTCACGCACGCCTCACATACCAGACTGAATGTTGGCAGGAGGAGCCTCACATACCAGACTaGATGTTGGCAGGAGGAGTG +
Preference number: 2 (lower is better)
Translates to: EFLLHARLTYQTECWQEEPHIPD*MLAGGV
Trigger: CACTCCTCCTGCCAACATTCAGTCTGGTATGTGAGG...CTCCTCCTGCCAACATTCAGTCTGGTATGTGAGGCGTGCGTGAAGCAAGAACTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp CATTTCTGTCCCAGGCAGGGGCACAGGATTAAGGATGTGCCAGACCCTCAAGATACGAGGCCGAATCTCTaGTTCATCACATGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: HFCPRQGHRIKDVPDPQDTRPNL*FITWAG
Trigger: ACCTGCCCATGTGATGAAGCAGAGATTCGGCCTCGT...ATCTTGAGGGTCTGGCACATCCTTAATCCTGTGCCCCTGCCTGGGACAGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR GCA 90 bp GCAGAGTGCCCTCAGGGTGACCACGAGAGACAGAGCAACTGGAGCCACATTTCTGCAGGCCGAGGCTTGTaGAGTAGACAAACATTTACA +
Preference number: 2 (lower is better)
Translates to: AECPQGDHERQSNWSHISAGRGL*SRQTFT
Trigger: TGTAAATGTTTGTCTACTGCACAAGCCTCGGCCTGC...AGAAATGTGGCTCCAGTTGCTCTGTCTCTCGTGGTCACCCTGAGGGCACTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp GAGTTCTTGCTTCACGCACGCCTCACATACCAGACTGAATGTTGGCAGGAGGAGGGTGAGCAAGGGCAATaGAGCTCATACAAAGGCCCA +
Preference number: 2 (lower is better)
Translates to: EFLLHARLTYQTECWQEEGEQGQ*SSYKGP
Trigger: TGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACC...CTCCTCCTGCCAACATTCAGTCTGGTATGTGAGGCGTGCGTGAAGCAAGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp AGGGACATAGGTGCCAAAGACCTCCACCACGAGTCGGTAGAGGTTGTACCCCTCACCCAGAACACACATTaGAGAGTCACATTCTTCGGC +
Preference number: 2 (lower is better)
Translates to: RDIGAKDLHHESVEVVPLTQNTH*RVTFFG
Trigger: GCCGAAGAATGTGACTCTGCAATGTGTGTTCTGGGT...GAGGGGTACAACCTCTACCGACTCGTGGTGGAGGTCTTTGGCACCTATGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CCA 90 bp GAGTTCTTGCTTCACGCACGCCTCACATACCAGACTGAATGTTGGCAGGAGGAGTCTCAGTCCTTGGAGTaGTGGGATGGAAACCAGACG +
Preference number: 2 (lower is better)
Translates to: EFLLHARLTYQTECWQEESQSLE*WDGNQT
Trigger: CGTCTGGTTTCCATCCCACCACTCCAAGGACTGAGA...CTCCTCCTGCCAACATTCAGTCTGGTATGTGAGGCGTGCGTGAAGCAAGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GACCAGGTCGGTCATCTGTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCAGCTATTTGGGGGCTTaGAGAGAACCTCTTAGGAGA +
Preference number: 2 (lower is better)
Translates to: DQVGHLCPYHLQQASNLPSYLGA*REPLRR
Trigger: TCTCCTAAGAGGTTCTCTCCAAGCCCCCAAATAGCT...GGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACACAGATGACCGACCTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GAAGTCTTCCAGGATTCCCAGGCAGGAATGATGGCTCCCTGTCCCTGTAGCTCCAGCTATTTGGGGGCTTaGAGAGAACCTCTTAGGAGA +
Preference number: 2 (lower is better)
Translates to: EVFQDSQAGMMAPCPCSSSYLGA*REPLRR
Trigger: TCTCCTAAGAGGTTCTCTCCAAGCCCCCAAATAGCT...GGAGCTACAGGGACAGGGAGCCATCATTCCTGCCTGGGAATCCTGGAAGACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GGTCAGGGTGAGCAAGGGCAATGCAGCTCATACAAAGGCCCAGATGGACAGAGGAGCTATTTGGGGGCTTaGAGAGAACCTCTTAGGAGA +
Preference number: 2 (lower is better)
Translates to: GQGEQGQCSSYKGPDGQRSYLGA*REPLRR
Trigger: TCTCCTAAGAGGTTCTCTCCAAGCCCCCAAATAGCT...CCTCTGTCCATCTGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp GGTCAGGGTGAGCAAGGGCAATGCAGCTCATACAAAGGCCCAGATGGACAGAGGACAGGATTAAGGATGTaGCAGACCCTCAAGATCCAA +
Preference number: 2 (lower is better)
Translates to: GQGEQGQCSSYKGPDGQRTGLRM*QTLKIQ
Trigger: TTGGATCTTGAGGGTCTGGCACATCCTTAATCCTGT...CCTCTGTCCATCTGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp GAAGTCTTCCAGGATTCCCAGGCAGGAATGATGGCTCCCTGTCCCTGTAGCTCCACAGGATTAAGGATGTaGCAGACCCTCAAGATCCAA +
Preference number: 2 (lower is better)
Translates to: EVFQDSQAGMMAPCPCSSTGLRM*QTLKIQ
Trigger: TTGGATCTTGAGGGTCTGGCACATCCTTAATCCTGT...GGAGCTACAGGGACAGGGAGCCATCATTCCTGCCTGGGAATCCTGGAAGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp GGTCATCTGTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCGTGTGTGTTGAGAGACAGAGCAACTaGAGCCACATTTCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: GHLCPYHLQQASNLPVCVERQSN*SHISVP
Trigger: TGGGACAGAAATGTGGCTCCAGTTGCTCTGTCTCTC...AACACACACGGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACACAGATGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR GCA 90 bp GGTCATCTGTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCGTGTGTGTTGCAGGCCGAGGCTTGTaGAGTAGACAAACATTTACA +
Preference number: 2 (lower is better)
Translates to: GHLCPYHLQQASNLPVCVAGRGL*SRQTFT
Trigger: TGTAAATGTTTGTCTACTGCACAAGCCTCGGCCTGC...AACACACACGGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACACAGATGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR CAA 90 bp AATTGGTACGTAAAAAGAACATCCTTCCCATCTTCAAGGTCAAGATaGAACGCTGACTCCTGCAGGAAGTCTTCCAGGATTCCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: NWYVKRTSFPSSRSR*NADSCRKSSRIPRQ
Trigger: CTGCCTGGGAATCCTGGAAGACTTCCTGCAGGAGTCAGCGTTCAATCTTGACCTTGAAGATGGGAAGGATGTTCTTTTTACGTACCAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CCA 90 bp TTCTCTCTTTCATGTTTCCTGATTGGCCCCAAGGTATTTGTATTAGTATCAGTGCTTGGAGTGGTGGGATaGAAACCAGACGGGACTGGC +
Preference number: 2 (lower is better)
Translates to: FSLSCFLIGPKVFVLVSVLGVVG*KPDGTG
Trigger: GCCAGTCCCGTCTGGTTTCCATCCCACCACTCCAAG...CACTGATACTAATACAAATACCTTGGGGCCAATCAGGAAACATGAAAGAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562631.7
ENST00000568909.5
3UTR-3UTR CCA 90 bp TTCATGTTTCCTGATTGGCCCCAAGGTATTTGTATTAGTATCAGTGACTCTTTCGCGCCTGGAGCTATTTaGGGGCTTGGAGAGAACCTC +
Preference number: 2 (lower is better)
Translates to: FMFPDWPQGICISISDSFAPGAI*GLGENL
Trigger: GAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGC...GAAAGAGTCACTGATACTAATACAAATACCTTGGGGCCAATCAGGAAACATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562631.7
ENST00000568909.5
3UTR-3UTR TCA 90 bp TTCTCTCTTTCATGTTTCCTGATTGGCCCCAAGGTATTTGTATTAGTATCAGTGAAGCTCAGAAGGAAATaGCCCAAAATGCTTACGCCA +
Preference number: 2 (lower is better)
Translates to: FSLSCFLIGPKVFVLVSVKLRRK*PKMLTP
Trigger: TGGCGTAAGCATTTTGGGTCATTTCCTTCTGAGCTT...CACTGATACTAATACAAATACCTTGGGGCCAATCAGGAAACATGAAAGAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562631.7
ENST00000568909.5
3UTR GCA 72 bp CTGGGGCTGGGCCGGGCTCGGGGGCCACAGGCAGTGTaGGACGAGGCCGAATCTCTGCTTCATCACATGGGC +
Preference number: 3 (lower is better)
Translates to: LGLGRARGPQAV*DEAESLLHHMG
Trigger: GCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCCCGAGCCCGGCCCAGCCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR TCA 72 bp GGCCGGCTGTGGGCTGGAGCTTCCACACCGTGGCGTTaGTCCGGTCCTCCTCGAAGGACACCATGTCCCCCA +
Preference number: 3 (lower is better)
Translates to: GRLWAGASTPWR*SGPPRRTPCPP
Trigger: TGGGGGACATGGTGTCCTTCGAGGAGGACCGGATCAACGCCACGGTGTGGAAGCTCCAGCCCACAGCCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CAA 90 bp TGGACAGAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGAGCTGGAGGTCCCTTTaGAGCTCGCACATGTCCACC +
Preference number: 3 (lower is better)
Translates to: WTEGPSPAHASVPSLAQGSWRSL*SSHMST
Trigger: GGTGGACATGTGCGAGCTCAAAAGGGACCTCCAGCT...CCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTCTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR TCA 72 bp AGGCCTAGATGCGGCTGGACGAGGTGCTGCCCGAGCTaGTGGGGAGCCTGGCGCTGTCTGAGTTGCTCTTCA +
Preference number: 3 (lower is better)
Translates to: RPRCGWTRCCPS*WGAWRCLSCSS
Trigger: TGAAGAGCAACTCAGACAGCGCCAGGCTCCCCATCAGCTCGGGCAGCACCTCGTCCAGCCGCATCTAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR CCA 72 bp CTGAGGCCCAGCAGTGTCAGCACATGTGACCACTTTTaGGTGTGGGGGCGCAGCCGCAGGATCTGCACCACC +
Preference number: 3 (lower is better)
Translates to: LRPSSVSTCDHF*VWGRSRRICTT
Trigger: GGTGGTGCAGATCCTGCGGCTGCGCCCCCACACCCAAAAGTGGTCACATGTGCTGACACTGCTGGGCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CAA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTGGTCAGTCTCAGTCCTaGGAGTGGTGGGATGGAAAC +
Preference number: 3 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRAGQSQS*EWWDGN
Trigger: GTTTCCATCCCACCACTCCAAGGACTGAGACTGACC...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CAA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCAGGCGCCTGGAGCTATTaGGGGGCTTGGAGAGAACCT +
Preference number: 3 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGAGAWSY*GAWREP
Trigger: AGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCC...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CAA 90 bp CACAGCCAAGATGATGGGGCCATAGTTGTCCACATCCACCAGGGCCACCAGCGTCAGCCGAGGGCCTCCTaGAGGCCTTCTGGGGATGCT +
Preference number: 3 (lower is better)
Translates to: HSQDDGAIVVHIHQGHQRQPRAS*RPSGDA
Trigger: AGCATCCCCAGAAGGCCTCAAGGAGGCCCTCGGCTG...ACGCTGGTGGCCCTGGTGGATGTGGACAACTATGGCCCCATCATCTTGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CAA 90 bp GGCCAGGGCAGAGACGACACAGCCCACGTAGGAGAGGAGGCTCAGGTAGTGCTTGTCCTGGAACAGGGCTaGGCTGCTGAAGTCCACCAG +
Preference number: 3 (lower is better)
Translates to: GQGRDDTAHVGEEAQVVLVLEQG*AAEVHQ
Trigger: CTGGTGGACTTCAGCAGCCAAGCCCTGTTCCAGGAC...AAGCACTACCTGAGCCTCCTCTCCTACGTGGGCTGTGTCGTCTCTGCCCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR CCA 72 bp CCCAGCAGTGTCAGCACATGTGACCACTTTTGGGTGTaGGGGCGCAGCCGCAGGATCTGCACCACCATGGTG +
Preference number: 3 (lower is better)
Translates to: PSSVSTCDHFWV*GRSRRICTTMV
Trigger: CACCATGGTGGTGCAGATCCTGCGGCTGCGCCCCCACACCCAAAAGTGGTCACATGTGCTGACACTGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CAA 90 bp GACCAGGTCGGTCATCTGTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCCAGCCGAGGGCCTCCTaGAGGCCTTCTGGGGATGCT +
Preference number: 3 (lower is better)
Translates to: DQVGHLCPYHLQQASNLPQPRAS*RPSGDA
Trigger: AGCATCCCCAGAAGGCCTCAAGGAGGCCCTCGGCTG...GGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACACAGATGACCGACCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR TCA 72 bp GCTGAGGGCCCCTCTGAGGCGTGTGCTTGGTCAGGGTaGGCAAGGGCAATGCAGCTCATACAAAGGCCCAGA +
Preference number: 3 (lower is better)
Translates to: AEGPSEACAWSG*ARAMQLIQRPR
Trigger: TCTGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACCAAGCACACGCCTCAGAGGGGCCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR TCA 72 bp GGAAGAGTGTTCGAGGCAGCAGCACCGAGTACTCCATaGTCTCGCTCTGCTCCTCCTCCTGCCGGGAGTGGA +
Preference number: 3 (lower is better)
Translates to: GRVFEAAAPSTP*SRSAPPPAGSG
Trigger: TCCACTCCCGGCAGGAGGAGGAGCAGAGCGAGATCATGGAGTACTCGGTGCTGCTGCCTCGAACACTCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR GCA 72 bp TCTCTCCTGACGGTCTCACACCCAGCACTGCTCCAATaGCCCGGGCTGCTCAATGTGGGGTCTTCAACCCAG +
Preference number: 3 (lower is better)
Translates to: SLLTVSHPALLQ*PGLLNVGSSTQ
Trigger: CTGGGTTGAAGACCCCACATTGAGCAGCCCGGGGCATTGGAGCAGTGCTGGGTGTGAGACCGTCAGGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR GCA 72 bp GACCACTTTTGGGTGTGGGGGCGCAGCCGCAGGATCTaGACCACCATGGTGGCTAGCATGGCCATGTTGAAC +
Preference number: 3 (lower is better)
Translates to: DHFWVWGRSRRI*TTMVASMAMLN
Trigger: GTTCAACATGGCCATGCTAGCCACCATGGTGGTGCAGATCCTGCGGCTGCGCCCCCACACCCAAAAGTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR CCA 72 bp GAGTGCCCTCAGGGTGACCACGAGAGACAGAGCAACTaGAGCCACATTTCTGTCCCAGGCAGGGGCACAGGA +
Preference number: 3 (lower is better)
Translates to: ECPQGDHERQSN*SHISVPGRGTG
Trigger: TCCTGTGCCCCTGCCTGGGACAGAAATGTGGCTCCAGTTGCTCTGTCTCTCGTGGTCACCCTGAGGGCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CAA 90 bp GCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAGGAGAACGGGCTCCGTGAGGTaGGCTACTTTGGTGTTCTGT +
Preference number: 3 (lower is better)
Translates to: AAEGAWSYLGAWREPLRRTGSVR*ATLVFC
Trigger: ACAGAACACCAAAGTAGCCAACCTCACGGAGCCCGT...TCTCCTAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR CAA 90 bp ATCTCTCCATGGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGCTCTCAGCATGGGGTaGGGAGTCTCCAGTTCGCCA +
Preference number: 3 (lower is better)
Translates to: ISPWSLGFPKSAADWPGAALSMG*GVSSSP
Trigger: TGGCGAACTGGAGACTCCCAACCCCATGCTGAGAGC...AGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562631.7
ENST00000568909.5
3UTR TCA 72 bp CATGGCGGCGCACTTCTGAGTCCCGTGGGAGCTGAGTaGGAGCCGAGTAGTCCCCAAGGCCAATTCAAAAGC +
Preference number: 3 (lower is better)
Translates to: HGGALLSPVGAE*EPSSPQGQFKS
Trigger: GCTTTTGAATTGGCCTTGGGGACTACTCGGCTCTCACTCAGCTCCCACGGGACTCAGAAGTGCGCCGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR TCA 72 bp GCAGGAAGACGGCCAGCAGCAGGTTCATGTGCACCTTaGTGGTGTAGTCCCGAGGTTTCCTCCTGCACGGCA +
Preference number: 3 (lower is better)
Translates to: AGRRPAAGSCAP*WCSPEVSSCTA
Trigger: TGCCGTGCAGGAGGAAACCTCGGGACTACACCATCAAGGTGCACATGAACCTGCTGCTGGCCGTCTTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR CCA 72 bp CCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATaGCAACGGCCCATCTCTCCATGGTCGTTGGGCTTT +
Preference number: 3 (lower is better)
Translates to: PIQKPSPGVRPP*QRPISPWSLGF
Trigger: AAAGCCCAACGACCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CAA 90 bp GAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGATCTCTCCATGGTCGTaGGGCTTTCCAAAGTCTGCG +
Preference number: 3 (lower is better)
Translates to: ELTMMGGRGRLELFGGLEISPWS*GFPKSA
Trigger: CGCAGACTTTGGAAAGCCCAACGACCATGGAGAGAT...CTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CAA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTACCCGTGTGTGTTTGTaGGACAGAATTAACCATGAT +
Preference number: 3 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRATRVCL*DRINHD
Trigger: ATCATGGTTAATTCTGTCCAACAAACACACACGGGT...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR TCA 72 bp GAAAGATGGGGAAGCCCCAGCCCATGGCGCTCAGCTTaGGTAGGTAGCCAGGGACATAGGTGCCAAAGACCT +
Preference number: 3 (lower is better)
Translates to: ERWGSPSPWRSA*VGSQGHRCQRP
Trigger: AGGTCTTTGGCACCTATGTCCCTGGCTACCTACTCAAGCTGAGCGCCATGGGCTGGGGCTTCCCCATCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR TCA 72 bp GCAGGAAGACGGCCAGCAGCAGGTTCATGTGCACCTTaGTGGTGTAGTCCCGAGGTTTCCTCCTGGAGCAGA +
Preference number: 3 (lower is better)
Translates to: AGRRPAAGSCAP*WCSPEVSSWSR
Trigger: TCTGCTCCAGGAGGAAACCTCGGGACTACACCATCAAGGTGCACATGAACCTGCTGCTGGCCGTCTTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565539.5
3UTR CCA 72 bp GTCACCAGAGGAGGTCAGTCTCAGTCCTTGGAGTGGTaGGATGGAAACCAGACGGGACTGGCATGGTCCACA +
Preference number: 3 (lower is better)
Translates to: VTRGGQSQSLEW*DGNQTGLAWST
Trigger: TGTGGACCATGCCAGTCCCGTCTGGTTTCCATCCCACCACTCCAAGGACTGAGACTGACCTCCTCTGGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR CCA 72 bp AGTGTCACCAGAGGAGGTCAGTCTCAGTCCTTGGAGTaGTGGGATGGAAACCAGACGGGACTGGCATGGTCC +
Preference number: 3 (lower is better)
Translates to: SVTRGGQSQSLE*WDGNQTGLAWS
Trigger: GGACCATGCCAGTCCCGTCTGGTTTCCATCCCACCACTCCAAGGACTGAGACTGACCTCCTCTGGTGACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR CCA 72 bp AGGCCAGTGTCACCAGAGGAGGTCAGTCTCAGTCCTTaGAGTGGTGGGATGGAAACCAGACGGGACTGGCAT +
Preference number: 3 (lower is better)
Translates to: RPVSPEEVSLSP*SGGMETRRDWH
Trigger: ATGCCAGTCCCGTCTGGTTTCCATCCCACCACTCCAAGGACTGAGACTGACCTCCTCTGGTGACACTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CAA 90 bp GGTCAGGGTGAGCAAGGGCAATGCAGCTCATACAAAGGCCCAGATGGACAGAGGGGTCAGTCTCAGTCCTaGGAGTGGTGGGATGGAAAC +
Preference number: 3 (lower is better)
Translates to: GQGEQGQCSSYKGPDGQRGQSQS*EWWDGN
Trigger: GTTTCCATCCCACCACTCCAAGGACTGAGACTGACC...CCTCTGTCCATCTGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CAA 90 bp GAAGTCTTCCAGGATTCCCAGGCAGGAATGATGGCTCCCTGTCCCTGTAGCTCCGGTCAGTCTCAGTCCTaGGAGTGGTGGGATGGAAAC +
Preference number: 3 (lower is better)
Translates to: EVFQDSQAGMMAPCPCSSGQSQS*EWWDGN
Trigger: GTTTCCATCCCACCACTCCAAGGACTGAGACTGACC...GGAGCTACAGGGACAGGGAGCCATCATTCCTGCCTGGGAATCCTGGAAGACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CAA 90 bp GAGTTCTTGCTTCACGCACGCCTCACATACCAGACTGAATGTTGGCAGGAGGAGGTCCTGGAACAGGGCTaGGCTGCTGAAGTCCACCAG +
Preference number: 3 (lower is better)
Translates to: EFLLHARLTYQTECWQEEVLEQG*AAEVHQ
Trigger: CTGGTGGACTTCAGCAGCCAAGCCCTGTTCCAGGAC...CTCCTCCTGCCAACATTCAGTCTGGTATGTGAGGCGTGCGTGAAGCAAGAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR-3UTR CAA 90 bp GTAGTGCTTGTGCACGGCGTCCACCTCCACCGAGGAGACCATCAGCACTGCAAAGCAGAAGCAGGATGTTaGGGTTTCTCTCCTGACGGT +
Preference number: 3 (lower is better)
Translates to: VVLVHGVHLHRGDHQHCKAEAGC*GFSPDG
Trigger: ACCGTCAGGAGAGAAACCCAAACATCCTGCTTCTGC...TTTGCAGTGCTGATGGTCTCCTCGGTGGAGGTGGACGCCGTGCACAAGCACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR TCA 72 bp AGTGGTTGCAGAAGCAGGATGTTTGGGTTTCTCTCCTaGCGGTCTCACACCCAGCACTGCTCCAATGCCCCG +
Preference number: 3 (lower is better)
Translates to: SGCRSRMFGFLS*RSHTQHCSNAP
Trigger: CGGGGCATTGGAGCAGTGCTGGGTGTGAGACCGTCAGGAGAGAAACCCAAACATCCTGCTTCTGCAACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR CCA 72 bp TTGGAGTGGTGGGATGGAAACCAGACGGGACTGGCATaGTCCACAGTTCTTGCCACAAGAGGGCTTCAGGAG +
Preference number: 3 (lower is better)
Translates to: LEWWDGNQTGLA*STVLATRGLQE
Trigger: CTCCTGAAGCCCTCTTGTGGCAAGAACTGTGGACCATGCCAGTCCCGTCTGGTTTCCATCCCACCACTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR CCA 72 bp AGTCCTTGGAGTGGTGGGATGGAAACCAGACGGGACTaGCATGGTCCACAGTTCTTGCCACAAGAGGGCTTC +
Preference number: 3 (lower is better)
Translates to: SPWSGGMETRRD*HGPQFLPQEGF
Trigger: GAAGCCCTCTTGTGGCAAGAACTGTGGACCATGCCAGTCCCGTCTGGTTTCCATCCCACCACTCCAAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR CCA 72 bp CAGAGGAGGTCAGTCTCAGTCCTTGGAGTGGTGGGATaGAAACCAGACGGGACTGGCATGGTCCACAGTTCT +
Preference number: 3 (lower is better)
Translates to: QRRSVSVLGVVG*KPDGTGMVHSS
Trigger: AGAACTGTGGACCATGCCAGTCCCGTCTGGTTTCCATCCCACCACTCCAAGGACTGAGACTGACCTCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR CCA 72 bp CCGGATCCAGCACATGGAAGGGTAGATGACGCCCTCTaGAGTCCTATGCACAGCCAAGATGATGGGGCCATA +
Preference number: 3 (lower is better)
Translates to: PDPAHGRVDDAL*SPMHSQDDGAI
Trigger: TATGGCCCCATCATCTTGGCTGTGCATAGGACTCCAGAGGGCGTCATCTACCCTTCCATGTGCTGGATCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CAA 90 bp GGTCAGGGTGAGCAAGGGCAATGCAGCTCATACAAAGGCCCAGATGGACAGAGGATCTCTCCATGGTCGTaGGGCTTTCCAAAGTCTGCG +
Preference number: 3 (lower is better)
Translates to: GQGEQGQCSSYKGPDGQRISPWS*GFPKSA
Trigger: CGCAGACTTTGGAAAGCCCAACGACCATGGAGAGAT...CCTCTGTCCATCTGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CAA 90 bp GACCAGGTCGGTCATCTGTGTCCCTACCACCTACAACAGGCCAGCAATCTACCCATCTCTCCATGGTCGTaGGGCTTTCCAAAGTCTGCG +
Preference number: 3 (lower is better)
Translates to: DQVGHLCPYHLQQASNLPISPWS*GFPKSA
Trigger: CGCAGACTTTGGAAAGCCCAACGACCATGGAGAGAT...GGGTAGATTGCTGGCCTGTTGTAGGTGGTAGGGACACAGATGACCGACCTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR TCA 72 bp CGCCTCACATACCAGACTGAATGTTGGCAGGAGGAGTaGCCAGGTCGGTCATCTGTGTCCCTACCACCTACA +
Preference number: 3 (lower is better)
Translates to: RLTYQTECWQEE*PGRSSVSLPPT
Trigger: TGTAGGTGGTAGGGACACAGATGACCGACCTGGTCACTCCTCCTGCCAACATTCAGTCTGGTATGTGAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR GCA 72 bp ACACATTGCAGAGTCACATTCTTCGGCTGTAGCTGGTaGTGGAAAGTGAGCACCACGGGCTCCGTGAGGTTG +
Preference number: 3 (lower is better)
Translates to: THCRVTFFGCSW*WKVSTTGSVRL
Trigger: CAACCTCACGGAGCCCGTGGTGCTCACTTTCCAGCACCAGCTACAGCCGAAGAATGTGACTCTGCAATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR CCA 72 bp CTACAACAGGCCAGCAATCTACCCGTGTGTGTTTGTTaGACAGAATTAACCATGATGGGCGGCCGAGGGCGC +
Preference number: 3 (lower is better)
Translates to: LQQASNLPVCVC*TELTMMGGRGR
Trigger: GCGCCCTCGGCCGCCCATCATGGTTAATTCTGTCCAACAAACACACACGGGTAGATTGCTGGCCTGTTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CAA 90 bp CACATTTCTGTCCCAGGCAGGGGCACAGGATTAAGGATGTGCCAGACCCTCAAGATCTCTCCATGGTCGTaGGGCTTTCCAAAGTCTGCG +
Preference number: 3 (lower is better)
Translates to: HISVPGRGTGLRMCQTLKISPWS*GFPKSA
Trigger: CGCAGACTTTGGAAAGCCCAACGACCATGGAGAGAT...CTTGAGGGTCTGGCACATCCTTAATCCTGTGCCCCTGCCTGGGACAGAAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CAA 90 bp GAGAGACAGAGCAACTGGAGCCACATTTCTGTCCCAGGCAGGGGCACAGGATTAATCTCTCCATGGTCGTaGGGCTTTCCAAAGTCTGCG +
Preference number: 3 (lower is better)
Translates to: ERQSNWSHISVPGRGTGLISPWS*GFPKSA
Trigger: CGCAGACTTTGGAAAGCCCAACGACCATGGAGAGAT...TAATCCTGTGCCCCTGCCTGGGACAGAAATGTGGCTCCAGTTGCTCTGTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
3UTR-3UTR CAA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGACCCGTGTGTGTTTGTaGGACAGAATTAACCATGAT +
Preference number: 3 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRTRVCL*DRINHD
Trigger: ATCATGGTTAATTCTGTCCAACAAACACACACGGGT...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR-3UTR CAA 90 bp GTAGTGCTTGTGCACGGCGTCCACCTCCACCGAGGAGACCATCAGCACTGCAAAGTGAGGTTGGCTACTTaGGTGTTCTGTACCACAATC +
Preference number: 3 (lower is better)
Translates to: VVLVHGVHLHRGDHQHCKVRLAT*VFCTTI
Trigger: GATTGTGGTACAGAACACCAAAGTAGCCAACCTCAC...TTTGCAGTGCTGATGGTCTCCTCGGTGGAGGTGGACGCCGTGCACAAGCACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR-3UTR CAA 90 bp GAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGACCCGTGTGTGTTTGTaGGACAGAATTAACCATGAT +
Preference number: 3 (lower is better)
Translates to: ELTMMGGRGRLELFGGLETRVCL*DRINHD
Trigger: ATCATGGTTAATTCTGTCCAACAAACACACACGGGT...CTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
3UTR GCA 72 bp CTGCTCAATGTGGGGTCTTCAACCCAGAACACACATTaGAGAGTCACATTCTTCGGCTGTAGCTGGTGCTGG +
Preference number: 3 (lower is better)
Translates to: LLNVGSSTQNTH*RVTFFGCSWCW
Trigger: CCAGCACCAGCTACAGCCGAAGAATGTGACTCTGCAATGTGTGTTCTGGGTTGAAGACCCCACATTGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
3UTR CCA 72 bp CACAGTCTGGATTTCCCATTTCTCATAAAAGGCAGGTaGTCTGGCTACATGGGCCCTCATCCCTGCAAGGTA +
Preference number: 3 (lower is better)
Translates to: HSLDFPFLIKGR*SGYMGPHPCKV
Trigger: TACCTTGCAGGGATGAGGGCCCATGTAGCCAGACCACCTGCCTTTTATGAGAAATGGGAAATCCAGACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562631.7
ENST00000568909.5
3UTR-3UTR CAA 90 bp GGTCAGGGTGAGCAAGGGCAATGCAGCTCATACAAAGGCCCAGATGGACAGAGGTTGACTGTAATCTCTTaGGCCAGAAAATGTTTTGGA +
Preference number: 3 (lower is better)
Translates to: GQGEQGQCSSYKGPDGQRLTVIS*ARKCFG
Trigger: TCCAAAACATTTTCTGGCCAAAGAGATTACAGTCAA...CCTCTGTCCATCTGGGCCTTTGTATGAGCTGCATTGCCCTTGCTCACCCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562631.7
ENST00000568909.5
CDS-3UTR CCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCTCTGCAACTGCTGGCTaGCGGGGGCAGCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQASATAG*RGQPRA
Trigger: GGCCCTCGGCTGCCCCCGCCAGCCAGCAGTTGCAGA...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR TCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCTCCAAAGTCTGCGGCTaGCTGGCCTGGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQASKVCG*LAWGWA
Trigger: GGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGA...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGAAGTCTGCGGCTGACTaGCCTGGGGCTGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGKSAAD*PGAGPG
Trigger: GCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTT...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCTCCACCGAGGCATTGTaGGCGGCCGTGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQASTEAL*AAVWGG
Trigger: TCCTCCCCACACGGCCGCTCACAATGCCTCGGTGGA...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR TCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGTCCAAAGTCTGCGGCTaGCTGGCCTGGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGSKVCG*LAWGWA
Trigger: GGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGA...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCGGGGACCCCCAGCTGTaGACGAAGGAGCAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQAGDPQL*TKEQGG
Trigger: GCCTCCTTGCTCCTTCGTTCACAGCTGGGGGTCCCC...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTGGGCCACCCCGGGCCTaGAGCCGCATGGACCAGTAC +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRAGPPRA*SRMDQY
Trigger: GTACTGGTCCATGCGGCTGCAGGCCCGGGGTGGCCC...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTTCTGCAACTGCTGGCTaGCGGGGGCAGCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRASATAG*RGQPRA
Trigger: GGCCCTCGGCTGCCCCCGCCAGCCAGCAGTTGCAGA...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGAGGCTCTGCAACTGCTaGCTGGCGGGGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGRLCNC*LAGAAE
Trigger: CTCGGCTGCCCCCGCCAGCCAGCAGTTGCAGAGCCT...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp CTCTGCAACTGCTGGCTGGCGGGGGCAGCCGAGGGCCTCCTTGAGGCCTTCTGGAGGCCGGCTGTGGGCTaGAGCTTCCACACCGTGGCG +
Preference number: 4 (lower is better)
Translates to: LCNCWLAGAAEGLLEAFWRPAVG*SFHTVA
Trigger: CGCCACGGTGTGGAAGCTCCAGCCCACAGCCGGCCT...CCAGAAGGCCTCAAGGAGGCCCTCGGCTGCCCCCGCCAGCCAGCAGTTGCAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
CDS-3UTR CCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGCCTGGAGGCCGGCTGTaGGCTGGAGCTTCCACACCG +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGPGGRL*AGASTP
Trigger: CGGTGTGGAAGCTCCAGCCCACAGCCGGCCTCCAGG...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGCGGCACTGGGCAGGCTaGTGTTCTGAGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGRHWAG*CSEGST
Trigger: GGTGGAGCCCTCAGAACATCAGCCTGCCCAGTGCCG...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGGGTAGGCGGCAATGGTaGCAAGGCAGGCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGGRRQW*QGRPGQ
Trigger: CTGCCCTGGCCTGCCTTGTCACCATTGCCGCCTACC...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GCTCGGCAGCCAGCCTCAGAGCCTGTCAGGGCCACCGGCTCGCTGAGCAGGAAGGGGGACCCCCAGCTGTaGACGAAGGAGCAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ARQPASEPVRATGSLSRKGDPQL*TKEQGG
Trigger: GCCTCCTTGCTCCTTCGTTCACAGCTGGGGGTCCCC...CTTCCTGCTCAGCGAGCCGGTGGCCCTGACAGGCTCTGAGGCTGGCTGCCGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564907.5
CDS-3UTR GCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCTGGTCCCCGCTGCCTaGCGAGTGAGCTGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRALVPAA*RVSWRA
Trigger: CGCTCTCCAGCTCACTCGGCAGGCAGCGGGGACCAG...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000562558.6
ENST00000562631.7
ENST00000673126.2
CDS-3UTR GCA 90 bp GCTCGGCAGCCAGCCTCAGAGCCTGTCAGGGCCACCGGCTCGCTGAGCAGGAAGTGCCGGGAGTGGATGTaGAGGTCCTGGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: ARQPASEPVRATGSLSRKCREWM*RSWRPA
Trigger: AGCCGGCCTCCAGGACCTGCACATCCACTCCCGGCA...CTTCCTGCTCAGCGAGCCGGTGGCCCTGACAGGCTCTGAGGCTGGCTGCCGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
CDS-3UTR GCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCTCTCACACCCAGCACTaGTCCAATGCCCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQASHTQH*SNAPGC
Trigger: GCAGCCCGGGGCATTGGAGCAGTGCTGGGTGTGAGA...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCCGCAGCCGCAGGATCTaGACCACCATGGTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQARSRRI*TTMVAS
Trigger: GCTAGCCACCATGGTGGTGCAGATCCTGCGGCTGCG...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp TGCCAGACCCTCAAGATCCAAGGCCTGGCCCCCAGCAATGAGGGCTGGGCCCAGGGGCCACCCCGGGCCTaGAGCCGCATGGACCAGTAC +
Preference number: 4 (lower is better)
Translates to: CQTLKIQGLAPSNEGWAQGPPRA*SRMDQY
Trigger: GTACTGGTCCATGCGGCTGCAGGCCCGGGGTGGCCC...CTGGGCCCAGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGAGGGTCTGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGGGCTGGAGGCCTAGATaGGGCTGGACGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGGWRPR*GWTRCC
Trigger: GCAGCACCTCGTCCAGCCGCATCTAGGCCTCCAGCC...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCCTGGAGGCCGGCTGTaGGCTGGAGCTTCCACACCG +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRAPGGRL*AGASTP
Trigger: CGGTGTGGAAGCTCCAGCCCACAGCCGGCCTCCAGG...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGAGGCCTAGATGCGGCTaGACGAGGTGCTGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGRPRCG*TRCCPS
Trigger: GCTCGGGCAGCACCTCGTCCAGCCGCATCTAGGCCT...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCATCGGTACCGAGCCTaGCTCAGGGGCAGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRAHRYRA*LRGRPR
Trigger: CCTCGGCCTGCCCCTGAGCCAGGCTCGGTACCGATG...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp CTCTGCAACTGCTGGCTGGCGGGGGCAGCCGAGGGCCTCCTTGAGGCCTTCTGGGGCCGCCCAGGCTGTTaGGAGATGCTGCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: LCNCWLAGAAEGLLEAFWGRPGC*EMLPSI
Trigger: GATGGAGGGCAGCATCTCCCAACAGCCTGGGCGGCC...CCAGAAGGCCTCAAGGAGGCCCTCGGCTGCCCCCGCCAGCCAGCAGTTGCAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564907.5
CDS-3UTR TCA 90 bp TGGACAGAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCGGCACTGGGCAGGCTaGTGTTCTGAGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: WTEGPSPAHASVPSLAQGRHWAG*CSEGST
Trigger: GGTGGAGCCCTCAGAACATCAGCCTGCCCAGTGCCG...CCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTCTGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR TCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTTCCACCGAGGCATTGTaGGCGGCCGTGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRASTEAL*AAVWGG
Trigger: TCCTCCCCACACGGCCGCTCACAATGCCTCGGTGGA...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGTCCACACCGTGGCGTTaGTCCGGTCCTCCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGSTPWR*SGPPRR
Trigger: CCTTCGAGGAGGACCGGATCAACGCCACGGTGTGGA...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTGGTAGGCGGCAATGGTaGCAAGGCAGGCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRAGRRQW*QGRPGQ
Trigger: CTGCCCTGGCCTGCCTTGTCACCATTGCCGCCTACC...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp TGCCAGACCCTCAAGATCCAAGGCCTGGCCCCCAGCAATGAGGGCTGGGCCCAGGGGCCACCGGCTCGCTaGGCAGGAAGCTCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: CQTLKIQGLAPSNEGWAQGPPAR*AGSSCP
Trigger: TGGACACGAGCTTCCTGCTCAGCGAGCCGGTGGCCC...CTGGGCCCAGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGAGGGTCTGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGATGGCGGCGCACTTCTaGGTCCCGTGGGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGMAAHF*VPWELS
Trigger: ACTCAGCTCCCACGGGACTCAGAAGTGCGCCGCCAT...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCTTCCCTGTGGCCCCTaGCGTGGGCACCTTGGACCA +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRALPCGP*RGHLGP
Trigger: TGGTCCAAGGTGCCCACGGCAGGGGCCACAGGGAAG...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp TGGACAGAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCTTCCCTGTGGCCCCTaGCGTGGGCACCTTGGACCA +
Preference number: 4 (lower is better)
Translates to: WTEGPSPAHASVPSLAQGLPCGP*RGHLGP
Trigger: TGGTCCAAGGTGCCCACGGCAGGGGCCACAGGGAAG...CCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTCTGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000388813.9
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGTTCGACTCCAGGCTCTaGAACTGCTGGCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGFDSRL*NCWLAG
Trigger: CCCCGCCAGCCAGCAGTTGCAGAGCCTGGAGTCGAA...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp CTCTGCAACTGCTGGCTGGCGGGGGCAGCCGAGGGCCTCCTTGAGGCCTTCTGGTTCGACTCCAGGCTCTaGAACTGCTGGCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LCNCWLAGAAEGLLEAFWFDSRL*NCWLAG
Trigger: CCCCGCCAGCCAGCAGTTGCAGAGCCTGGAGTCGAA...CCAGAAGGCCTCAAGGAGGCCCTCGGCTGCCCCCGCCAGCCAGCAGTTGCAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
CDS-3UTR GCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTTGCCGGGAGTGGATGTaGAGGTCCTGGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRACREWM*RSWRPA
Trigger: AGCCGGCCTCCAGGACCTGCACATCCACTCCCGGCA...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGTCTCACACCCAGCACTaGTCCAATGCCCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGSHTQH*SNAPGC
Trigger: GCAGCCCGGGGCATTGGAGCAGTGCTGGGTGTGAGA...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp CTGAGGGCCCCTCTGAGGCGTGTGCTTGGTCAGGGTGAGCAAGGGCAATGCAGCGGGCCACCCCGGGCCTaGAGCCGCATGGACCAGTAC +
Preference number: 4 (lower is better)
Translates to: LRAPLRRVLGQGEQGQCSGPPRA*SRMDQY
Trigger: GTACTGGTCCATGCGGCTGCAGGCCCGGGGTGGCCC...GCTGCATTGCCCTTGCTCACCCTGACCAAGCACACGCCTCAGAGGGGCCCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGGGGCCACAGGCAGTGTaGGACGAGGCCGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGGPQAV*DEAESL
Trigger: CAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCC...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
68% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp TGCCAGACCCTCAAGATCCAAGGCCTGGCCCCCAGCAATGAGGGCTGGGCCCAGCCCGAGGTTTCCTCCTaGACGGCAGGGGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: CQTLKIQGLAPSNEGWAQPEVSS*TAGAPW
Trigger: CCAGGGTGCCCCTGCCGTGCAGGAGGAAACCTCGGG...CTGGGCCCAGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGAGGGTCTGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCGGGACCGGGTTTGTTTaGTGGGGAGACACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQAGTGFV*WGDTPL
Trigger: GAGAGGGGTGTCTCCCCACCAAACAAACCCGGTCCC...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388813.9
ENST00000456916.5
CDS-3UTR CCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGCGAAAGTCTTCCCTGTaGCCCCTGCCGTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGRKSSL*PLPWAP
Trigger: AGGTGCCCACGGCAGGGGCCACAGGGAAGACTTTCG...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCATCTGCAACTGCTGGCTaGCGGGGGCAGCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGASATAG*RGQPRA
Trigger: GGCCCTCGGCTGCCCCCGCCAGCCAGCAGTTGCAGA...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TGCCAGACCCTCAAGATCCAAGGCCTGGCCCCCAGCAATGAGGGCTGGGCCCAGAGGCCGGCTGTGGGCTaGAGCTTCCACACCGTGGCG +
Preference number: 4 (lower is better)
Translates to: CQTLKIQGLAPSNEGWAQRPAVG*SFHTVA
Trigger: CGCCACGGTGTGGAAGCTCCAGCCCACAGCCGGCCT...CTGGGCCCAGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGAGGGTCTGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp CTGAGGGCCCCTCTGAGGCGTGTGCTTGGTCAGGGTGAGCAAGGGCAATGCAGCAAGTCTGCGGCTGACTaGCCTGGGGCTGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LRAPLRRVLGQGEQGQCSKSAAD*PGAGPG
Trigger: GCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTT...GCTGCATTGCCCTTGCTCACCCTGACCAAGCACACGCCTCAGAGGGGCCCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp CAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGAAGTCTGCGGCTGACTaGCCTGGGGCTGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: QKPSPGVRPPWQRPISPWKSAAD*PGAGPG
Trigger: GCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTT...CCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TGCCAGACCCTCAAGATCCAAGGCCTGGCCCCCAGCAATGAGGGCTGGGCCCAGGCGGCCGAGGGCGCCTaGAGCTATTTGGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: CQTLKIQGLAPSNEGWAQAAEGA*SYLGAW
Trigger: CCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC...CTGGGCCCAGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGAGGGTCTGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp TGCCAGACCCTCAAGATCCAAGGCCTGGCCCCCAGCAATGAGGGCTGGGCCCAGCACCACCTCCAGGTCTaGGCAGGTCCCTCACCGGCC +
Preference number: 4 (lower is better)
Translates to: CQTLKIQGLAPSNEGWAQHHLQV*AGPSPA
Trigger: GGCCGGTGAGGGACCTGCCCAGACCTGGAGGTGGTG...CTGGGCCCAGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGAGGGTCTGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568909.5
CDS-3UTR TCA 90 bp GAGAGCCGAGTAGTCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCCCGCTGCCTGCCGAGTaGGCTGGAGAGCGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ESRVVPKANSKAQPGSPSPLPAE*AGERGR
Trigger: CCTCCCACGCTCTCCAGCTCACTCGGCAGGCAGCGG...GGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGACTACTCGGCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000562558.6
ENST00000562631.7
ENST00000673126.2
CDS-3UTR TCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCAAGGGGCATGGACTGTaGGGGCCTCTTCGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQAKGHGL*GPLRSS
Trigger: AGAACTCCGAAGAGGCCCTCACAGTCCATGCCCCTT...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR TCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGGCTGGAGGTCCCTTTTaGGCTCGCACATGTCCACCG +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGAGGPF*ARTCPP
Trigger: CGGTGGACATGTGCGAGCTCAAAAGGGACCTCCAGC...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGGCACCACGGGCTCCGTaGGGTTGGCTACTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGAPRAP*GWLLWC
Trigger: ACACCAAAGTAGCCAACCTCACGGAGCCCGTGGTGC...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp CCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCGGGCCACCGGCTCGCTaGGCAGGAAGCTCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PKANSKAQPGSPSTMATAGPPAR*AGSSCP
Trigger: TGGACACGAGCTTCCTGCTCAGCGAGCCGGTGGCCC...GGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCAGGGCCACCGGCTCGCTaGGCAGGAAGCTCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGAGPPAR*AGSSCP
Trigger: TGGACACGAGCTTCCTGCTCAGCGAGCCGGTGGCCC...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCATCCAAAGTCTGCGGCTaGCTGGCCTGGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGASKVCG*LAWGWA
Trigger: GGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGA...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GGCAGCAGCACCGAGTACTCCATGATCTCGCTCTGCTCCTCCTCCTGCCGGGAGTCCAAAGTCTGCGGCTaGCTGGCCTGGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GSSTEYSMISLCSSSCRESKVCG*LAWGWA
Trigger: GGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGA...CTCCCGGCAGGAGGAGGAGCAGAGCGAGATCATGGAGTACTCGGTGCTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
CDS-3UTR TCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCCCGTGGGAGCTGAGTaGGAGCCGAGTAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRAPVGAE*EPSSPQ
Trigger: TTGGGGACTACTCGGCTCTCACTCAGCTCCCACGGG...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp CCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCAGCCCTGGTCCCCGCTaGCTGCCGAGTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PKANSKAQPGSPSTMATASPGPR*LPSELE
Trigger: CTCCAGCTCACTCGGCAGGCAGCGGGGACCAGGGCT...GGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000562558.6
ENST00000562631.7
ENST00000673126.2
CDS-3UTR GCA 90 bp TGCCAGACCCTCAAGATCCAAGGCCTGGCCCCCAGCAATGAGGGCTGGGCCCAGCTTCCCTGTGGCCCCTaGCGTGGGCACCTTGGACCA +
Preference number: 4 (lower is better)
Translates to: CQTLKIQGLAPSNEGWAQLPCGP*RGHLGP
Trigger: TGGTCCAAGGTGCCCACGGCAGGGGCCACAGGGAAG...CTGGGCCCAGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGAGGGTCTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGCCAGCACTGCTCCAATaGCCCGGGCTGCTCAATGTG +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGPALLQ*PGLLNV
Trigger: CACATTGAGCAGCCCGGGGCATTGGAGCAGTGCTGG...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGGGGCCACCCCGGGCCTaGAGCCGCATGGACCAGTAC +
Preference number: 4 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRGPPRA*SRMDQY
Trigger: GTACTGGTCCATGCGGCTGCAGGCCCGGGGTGGCCC...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp GGGGGCCACAGGCAGTGTGCGACGAGGCCGAATCTCTGCTTCATCACATGGGCAGGGCCACCCCGGGCCTaGAGCCGCATGGACCAGTAC +
Preference number: 4 (lower is better)
Translates to: GGHRQCATRPNLCFITWAGPPRA*SRMDQY
Trigger: GTACTGGTCCATGCGGCTGCAGGCCCGGGGTGGCCC...TGCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp GGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACTTCTGAGTCCCGGGCCACCCCGGGCCTaGAGCCGCATGGACCAGTAC +
Preference number: 4 (lower is better)
Translates to: GQMWGQYPRQHGGALLSPGPPRA*SRMDQY
Trigger: GTACTGGTCCATGCGGCTGCAGGCCCGGGGTGGCCC...GGGACTCAGAAGTGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp TGCCAGACCCTCAAGATCCAAGGCCTGGCCCCCAGCAATGAGGGCTGGGCCCAGGGCTGGAGGCCTAGATaGGGCTGGACGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: CQTLKIQGLAPSNEGWAQGWRPR*GWTRCC
Trigger: GCAGCACCTCGTCCAGCCGCATCTAGGCCTCCAGCC...CTGGGCCCAGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGAGGGTCTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp CCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCTGGCCCTGAAGGTCTaGCCTGGGCCCCATTCGCCC +
Preference number: 4 (lower is better)
Translates to: PKANSKAQPGSPSTMATALALKV*PGPHSP
Trigger: GGGCGAATGGGGCCCAGGGCAGACCTTCAGGGCCAG...GGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp TGGACAGAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGGGCGAGCTGCTGCTGTaGTCCTGGCAAAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: WTEGPSPAHASVPSLAQGGELLL*SWQRAS
Trigger: AGAGGCCCTTTGCCAGGAGCACAGCAGCAGCTCGCC...CCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTCTGTCCA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp CCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCCCGAGGTTTCCTCCTaGACGGCAGGGGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: PKANSKAQPGSPSTMATAPEVSS*TAGAPW
Trigger: CCAGGGTGCCCCTGCCGTGCAGGAGGAAACCTCGGG...GGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TGCCAGACCCTCAAGATCCAAGGCCTGGCCCCCAGCAATGAGGGCTGGGCCCAGCTGTGGCCCCTGCCGTaGGCACCTTGGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CQTLKIQGLAPSNEGWAQLWPLP*APWTRK
Trigger: CTTCCTGGTCCAAGGTGCCCACGGCAGGGGCCACAG...CTGGGCCCAGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGAGGGTCTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TGGACAGAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCGAAAGTCTTCCCTGTaGCCCCTGCCGTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: WTEGPSPAHASVPSLAQGRKSSL*PLPWAP
Trigger: AGGTGCCCACGGCAGGGGCCACAGGGAAGACTTTCG...CCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTCTGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCCTGCTCCTGTGTGTCTaGTTCCGCTGGCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQALLLCV*FRWLQK
Trigger: CTTCTGCAGCCAGCGGAACCAGACACACAGGAGCAG...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp AGGGCTTGGCTGCTGAAGTCCACCAGGAGGAGTCTCTTCTCAGCCTCCCCGCTCTCTGCAACTGCTGGCTaGCGGGGGCAGCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RAWLLKSTRRSLFSASPLSATAG*RGQPRA
Trigger: GGCCCTCGGCTGCCCCCGCCAGCCAGCAGTTGCAGA...GAGCGGGGAGGCTGAGAAGAGACTCCTCCTGGTGGACTTCAGCAGCCAAGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
CDS-3UTR CCA 90 bp TTCTCAGCCTCCCCGCTCCGGCCTTTCGTCCTCTGGAAGAGTGTTCGAGGCAGCTCTGCAACTGCTGGCTaGCGGGGGCAGCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: FSASPLRPFVLWKSVRGSSATAG*RGQPRA
Trigger: GGCCCTCGGCTGCCCCCGCCAGCCAGCAGTTGCAGA...GCTGCCTCGAACACTCTTCCAGAGGACGAAAGGCCGGAGCGGGGAGGCTGAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
CDS-3UTR CCA 90 bp CCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCAGGCCGGCTGTGGGCTaGAGCTTCCACACCGTGGCG +
Preference number: 4 (lower is better)
Translates to: PKANSKAQPGSPSTMATARPAVG*SFHTVA
Trigger: CGCCACGGTGTGGAAGCTCCAGCCCACAGCCGGCCT...GGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp CTGAGGGCCCCTCTGAGGCGTGTGCTTGGTCAGGGTGAGCAAGGGCAATGCAGCCCTGGAGGCCGGCTGTaGGCTGGAGCTTCCACACCG +
Preference number: 4 (lower is better)
Translates to: LRAPLRRVLGQGEQGQCSPGGRL*AGASTP
Trigger: CGGTGTGGAAGCTCCAGCCCACAGCCGGCCTCCAGG...GCTGCATTGCCCTTGCTCACCCTGACCAAGCACACGCCTCAGAGGGGCCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACCTGGAGGCCGGCTGTaGGCTGGAGCTTCCACACCG +
Preference number: 4 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGAPGGRL*AGASTP
Trigger: CGGTGTGGAAGCTCCAGCCCACAGCCGGCCTCCAGG...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGGGCTGTAGCTGGTGCTaGAAAGTGAGCACCACGGGC +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGGCSWC*KVSTTG
Trigger: GCCCGTGGTGCTCACTTTCCAGCACCAGCTACAGCC...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGCCCGAGGTTTCCTCCTaGAGCAGAGGTAGGCGGCAA +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGPEVSS*SRGRRQ
Trigger: TTGCCGCCTACCTCTGCTCCAGGAGGAAACCTCGGG...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000565539.5
ENST00000568908.5
CDS-3UTR CCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTGCAGGAAGATGGCACTaGCTCGGCAGCCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRAAGRWH*LGSQPQ
Trigger: CTGAGGCTGGCTGCCGAGCCAGTGCCATCTTCCTGC...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCAGAAGTGCAGGAAGATaGCACTGGCTCGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQARSAGR*HWLGSQ
Trigger: CTGGCTGCCGAGCCAGTGCCATCTTCCTGCACTTCT...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTGACCACTTTTGGGTGTaGGGGCGCAGCCGCAGGATC +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRADHFWV*GRSRRI
Trigger: GATCCTGCGGCTGCGCCCCCACACCCAAAAGTGGTC...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TGGACAGAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGGACCACTTTTGGGTGTaGGGGCGCAGCCGCAGGATC +
Preference number: 4 (lower is better)
Translates to: WTEGPSPAHASVPSLAQGDHFWV*GRSRRI
Trigger: GATCCTGCGGCTGCGCCCCCACACCCAAAAGTGGTC...CCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTCTGTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGACATGTGACCACTTTTaGGTGTGGGGGCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGTCDHF*VWGRSR
Trigger: GCGGCTGCGCCCCCACACCCAAAAGTGGTCACATGT...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GGGGGCCACAGGCAGTGTGCGACGAGGCCGAATCTCTGCTTCATCACATGGGCAAAGTCTGCGGCTGACTaGCCTGGGGCTGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GGHRQCATRPNLCFITWAKSAAD*PGAGPG
Trigger: GCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTT...TGCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp AGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCAAGTCTGCGGCTGACTaGCCTGGGGCTGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RPIQKPSPGVRPPWQRPIKSAAD*PGAGPG
Trigger: GCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTT...GATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GGGGCCACAGGCAGTGTGCGACGAGGCCGAATCTCTGCTTCATCACATGGGCAGAAGTCTGCGGCTGACTaGCCTGGGGCTGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GATGSVRRGRISASSHGQKSAAD*PGAGPG
Trigger: GCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTT...CTGCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGGGAGTCCGTCCACCATaGCAACGGCCCATCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGGVRPP*QRPISP
Trigger: TGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCC...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp CCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCGGTACCGAGCCTaGCTCAGGGGCAGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PKANSKAQPGSPSTMATAHRYRA*LRGRPR
Trigger: CCTCGGCCTGCCCCTGAGCCAGGCTCGGTACCGATG...GGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp GGCAGCAGCACCGAGTACTCCATGATCTCGCTCTGCTCCTCCTCCTGCCGGGAGGCGGCCGAGGGCGCCTaGAGCTATTTGGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GSSTEYSMISLCSSSCREAAEGA*SYLGAW
Trigger: CCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC...CTCCCGGCAGGAGGAGGAGCAGAGCGAGATCATGGAGTACTCGGTGCTGCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564907.5
CDS-3UTR CCA 90 bp GTCCACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTCCACCTGCTGCCAGGTaGAGGGTCCCACGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VHRGIVSGRVGRTVEGEGPPAAR*RVPRRA
Trigger: GGCCCTGCGTGGGACCCTCCACCTGGCAGCAGGTGG...ACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563007.5
CDS-3UTR CCA 90 bp GTCCACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTGACCCTGCTGCCAGGTaGAGGGTCCCACGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VHRGIVSGRVGRTVEGEGDPAAR*RVPRRA
Trigger: GGCCCTGCGTGGGACCCTCCACCTGGCAGCAGGGTC...ACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568645.5
CDS-3UTR CCA 90 bp TGGACAGAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGGGAAGCAGAGGCTGCTaGATGAGCCCAGGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: WTEGPSPAHASVPSLAQGGSRGC*MSPGES
Trigger: GGACTCCCCTGGGCTCATCCAGCAGCCTCTGCTTCC...CCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTCTGTCCA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564907.5
CDS-3UTR CCA 90 bp TGCCAGACCCTCAAGATCCAAGGCCTGGCCCCCAGCAATGAGGGCTGGGCCCAGCAGTCTGAGCTTGTCTaGGCTGGCGGGCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: CQTLKIQGLAPSNEGWAQQSELV*AGGQPQ
Trigger: CTGGGGCTGCCCGCCAGCCCAGACAAGCTCAGACTG...CTGGGCCCAGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGAGGGTCTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568908.5
ENST00000568909.5
3UTR CAA 72 bp AGGCCGGCTGTGGGCTGGAGCTTCCACACCGTGGCGTaGATCCGGTCCTCCTCGAAGGACACCATGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RPAVGWSFHTVA*IRSSSKDTMSP
Trigger: GGGGGACATGGTGTCCTTCGAGGAGGACCGGATCAACGCCACGGTGTGGAAGCTCCAGCCCACAGCCGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
CDS-3UTR TCA 90 bp GAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGCCGCTGCCTGCCGAGTaGGCTGGAGAGCGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ELTMMGGRGRLELFGGLEPLPAE*AGERGR
Trigger: CCTCCCACGCTCTCCAGCTCACTCGGCAGGCAGCGG...CTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000562558.6
ENST00000562631.7
CDS-3UTR TCA 90 bp CACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTGAACCGCTGCCTGCCGAGTaGGCTGGAGAGCGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: HRGIVSGRVGRTVEGEGEPLPAE*AGERGR
Trigger: CCTCCCACGCTCTCCAGCTCACTCGGCAGGCAGCGG...TTCACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563007.5
ENST00000568645.5
CDS-3UTR TCA 90 bp CAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGCGGCACTGGGCAGGCTaGTGTTCTGAGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: QKPSPGVRPPWQRPISPWRHWAG*CSEGST
Trigger: GGTGGAGCCCTCAGAACATCAGCCTGCCCAGTGCCG...CCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp CTGAGGGCCCCTCTGAGGCGTGTGCTTGGTCAGGGTGAGCAAGGGCAATGCAGCTCCACCGAGGCATTGTaGGCGGCCGTGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LRAPLRRVLGQGEQGQCSSTEAL*AAVWGG
Trigger: TCCTCCCCACACGGCCGCTCACAATGCCTCGGTGGA...GCTGCATTGCCCTTGCTCACCCTGACCAAGCACACGCCTCAGAGGGGCCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR TCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGGCACCGAGTACTCCATaGTCTCGCTCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGAPSTP*SRSAPP
Trigger: AGGAGGAGCAGAGCGAGATCATGGAGTACTCGGTGC...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTGCACCACGGGCTCCGTaGGGTTGGCTACTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRAAPRAP*GWLLWC
Trigger: ACACCAAAGTAGCCAACCTCACGGAGCCCGTGGTGC...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACTTCTGAGTCCCGGGCCACCGGCTCGCTaGGCAGGAAGCTCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GQMWGQYPRQHGGALLSPGPPAR*AGSSCP
Trigger: TGGACACGAGCTTCCTGCTCAGCGAGCCGGTGGCCC...GGGACTCAGAAGTGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp CAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGGGCCAAGGACCAGGCTaGGGCCCAGCAGTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: QKPSPGVRPPWQRPISPWGQGPG*GPAVSA
Trigger: TGCTGACACTGCTGGGCCTCAGCCTGGTCCTTGGCC...CCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTGAGCCTGGCGCTGTCTaGGTTGCTCTTCAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRAEPGAV*VALQRG
Trigger: TCCCCTCTGAAGAGCAACTCAGACAGCGCCAGGCTC...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp CCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCCAGGGAATAGAGGCTaGGAAGCCCCAGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: PKANSKAQPGSPSTMATAPGNRG*EAPAAS
Trigger: GCTGGCGGCTGGGGCTTCTCAGCCTCTATTCCCTGG...GGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565539.5
ENST00000565976.6
CDS-3UTR TCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACACAGGCACCCAGTCTaGGCTTGTCTGGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGAHRHPV*ACLGWR
Trigger: CCGCCAGCCCAGACAAGCTCAGACTGGGTGCCTGTG...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp GGGGCCACAGGCAGTGTGCGACGAGGCCGAATCTCTGCTTCATCACATGGGCAGCTGGTCCCCGCTGCCTaGCGAGTGAGCTGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: GATGSVRRGRISASSHGQLVPAA*RVSWRA
Trigger: CGCTCTCCAGCTCACTCGGCAGGCAGCGGGGACCAG...CTGCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000562558.6
ENST00000562631.7
ENST00000673126.2
CDS-3UTR GCA 90 bp GTCCACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTCTGGTCCCCGCTGCCTaGCGAGTGAGCTGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: VHRGIVSGRVGRTVEGEGLVPAA*RVSWRA
Trigger: CGCTCTCCAGCTCACTCGGCAGGCAGCGGGGACCAG...ACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563007.5
ENST00000568645.5
CDS-3UTR GCA 90 bp GAGAGCCGAGTAGTCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCAGCCCTGGTCCCCGCTaGCTGCCGAGTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ESRVVPKANSKAQPGSPSSPGPR*LPSELE
Trigger: CTCCAGCTCACTCGGCAGGCAGCGGGGACCAGGGCT...GGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGACTACTCGGCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000562558.6
ENST00000562631.7
ENST00000673126.2
CDS-3UTR GCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGAGGAACAGTGTCGTCTaGAGCAGCGACTGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGRNSVV*SSDWGV
Trigger: GACTCCCCAGTCGCTGCTGCAGACGACACTGTTCCT...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp CCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCTTCCCTGTGGCCCCTaGCGTGGGCACCTTGGACCA +
Preference number: 4 (lower is better)
Translates to: PKANSKAQPGSPSTMATALPCGP*RGHLGP
Trigger: TGGTCCAAGGTGCCCACGGCAGGGGCCACAGGGAAG...GGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp CAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGCTTCCCTGTGGCCCCTaGCGTGGGCACCTTGGACCA +
Preference number: 4 (lower is better)
Translates to: QKPSPGVRPPWQRPISPWLPCGP*RGHLGP
Trigger: TGGTCCAAGGTGCCCACGGCAGGGGCCACAGGGAAG...CCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCTCTGGTTCCGCTGGCTaGAGAAGCGAAAGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQASGSAG*RSESLP
Trigger: GGGAAGACTTTCGCTTCTGCAGCCAGCGGAACCAGA...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp GTGGGCTGGAGCTTCCACACCGTGGCGTTGATCCGGTCCTCCTCGAAGGACACCTGCCGGGAGTGGATGTaGAGGTCCTGGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: VGWSFHTVALIRSSSKDTCREWM*RSWRPA
Trigger: AGCCGGCCTCCAGGACCTGCACATCCACTCCCGGCA...GGTGTCCTTCGAGGAGGACCGGATCAACGCCACGGTGTGGAAGCTCCAGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
CDS-3UTR GCA 90 bp CAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGTGCCGGGAGTGGATGTaGAGGTCCTGGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: QKPSPGVRPPWQRPISPWCREWM*RSWRPA
Trigger: AGCCGGCCTCCAGGACCTGCACATCCACTCCCGGCA...CCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp GCCCTAGGCCAGTGTCACCAGAGGAGGTCAGTCTCAGTCCTTGGAGTGGTGGGAGGGCCACCCCGGGCCTaGAGCCGCATGGACCAGTAC +
Preference number: 4 (lower is better)
Translates to: ALGQCHQRRSVSVLGVVGGPPRA*SRMDQY
Trigger: GTACTGGTCCATGCGGCTGCAGGCCCGGGGTGGCCC...TCCCACCACTCCAAGGACTGAGACTGACCTCCTCTGGTGACACTGGCCTAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp GATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTACTGGCCCTGAAGGTCTaGCCTGGGCCCCATTCGCCC +
Preference number: 4 (lower is better)
Translates to: DGRPRAPGAIWGLGENLLLALKV*PGPHSP
Trigger: GGGCGAATGGGGCCCAGGGCAGACCTTCAGGGCCAG...TAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp CTGAGGGCCCCTCTGAGGCGTGTGCTTGGTCAGGGTGAGCAAGGGCAATGCAGCGAGCGAGACCCTGTCTaGTGCCAGGTGGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LRAPLRRVLGQGEQGQCSERDPV*CQVEGP
Trigger: GGGACCCTCCACCTGGCAGCAGACAGGGTCTCGCTC...GCTGCATTGCCCTTGCTCACCCTGACCAAGCACACGCCTCAGAGGGGCCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562558.6
CDS-3UTR CCA 90 bp GGGGCCACAGGCAGTGTGCGACGAGGCCGAATCTCTGCTTCATCACATGGGCAGGCCTGCCGAGTGAGCTaGAGAGCGTGGGAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GATGSVRRGRISASSHGQACRVS*RAWEAP
Trigger: GGGAGCCTCCCACGCTCTCCAGCTCACTCGGCAGGC...CTGCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000562558.6
ENST00000562631.7
ENST00000673126.2
CDS-3UTR CCA 90 bp GTCCACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTGCCTGCCGAGTGAGCTaGAGAGCGTGGGAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VHRGIVSGRVGRTVEGEGACRVS*RAWEAP
Trigger: GGGAGCCTCCCACGCTCTCCAGCTCACTCGGCAGGC...ACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563007.5
ENST00000568645.5
CDS-3UTR CCA 90 bp TGCCAGACCCTCAAGATCCAAGGCCTGGCCCCCAGCAATGAGGGCTGGGCCCAGGCAGGGCCAGGCGGCTaGACCACCTTTCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: CQTLKIQGLAPSNEGWAQAGPGG*TTFQDP
Trigger: TGGATCCTGAAAGGTGGTCCAGCCGCCTGGCCCTGC...CTGGGCCCAGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGAGGGTCTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000562558.6
ENST00000562631.7
ENST00000673126.2
CDS-3UTR CCA 90 bp CAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGCTGTGGCCCCTGCCGTaGGCACCTTGGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QKPSPGVRPPWQRPISPWLWPLP*APWTRK
Trigger: CTTCCTGGTCCAAGGTGCCCACGGCAGGGGCCACAG...CCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCGGAGATGCGCAGGTCTaGTGTGGGTTTGTAGTGGAG +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQAGDAQV*CGFVVE
Trigger: CTCCACTACAAACCCACACCAGACCTGCGCATCTCC...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp TGCCAGACCCTCAAGATCCAAGGCCTGGCCCCCAGCAATGAGGGCTGGGCCCAGGCCAGGCTCTCCTCCTaGTGCTGGAAGCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: CQTLKIQGLAPSNEGWAQARLSS*CWKQRR
Trigger: CCTCCTCTGCTTCCAGCACCAGGAGGAGAGCCTGGC...CTGGGCCCAGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGAGGGTCTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCGTGTGGGGAGGACTGTaGAAGGAGAAGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQAVWGGL*KEKVKL
Trigger: CAGCTTCACCTTCTCCTTCCACAGTCCTCCCCACAC...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCAACTGGCTGAGCAGCTaGAGGTCCCTTTTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQANWLSS*RSLLSS
Trigger: CGAGCTCAAAAGGGACCTCCAGCTGCTCAGCCAGTT...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp GAGAGCCGAGTAGTCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCAGGCTCTGCAACTGCTaGCTGGCGGGGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: ESRVVPKANSKAQPGSPSRLCNC*LAGAAE
Trigger: CTCGGCTGCCCCCGCCAGCCAGCAGTTGCAGAGCCT...GGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGACTACTCGGCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp AGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCAGGCTCTGCAACTGCTaGCTGGCGGGGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: RPIQKPSPGVRPPWQRPIRLCNC*LAGAAE
Trigger: CTCGGCTGCCCCCGCCAGCCAGCAGTTGCAGAGCCT...GATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGAGGCTCTGCAACTGCTaGCTGGCGGGGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRRLCNC*LAGAAE
Trigger: CTCGGCTGCCCCCGCCAGCCAGCAGTTGCAGAGCCT...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACTTCTGAGTCCCAGGCCGGCTGTGGGCTaGAGCTTCCACACCGTGGCG +
Preference number: 4 (lower is better)
Translates to: GQMWGQYPRQHGGALLSPRPAVG*SFHTVA
Trigger: CGCCACGGTGTGGAAGCTCCAGCCCACAGCCGGCCT...GGGACTCAGAAGTGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GGGGGCCACAGGCAGTGTGCGACGAGGCCGAATCTCTGCTTCATCACATGGGCACCTGGAGGCCGGCTGTaGGCTGGAGCTTCCACACCG +
Preference number: 4 (lower is better)
Translates to: GGHRQCATRPNLCFITWAPGGRL*AGASTP
Trigger: CGGTGTGGAAGCTCCAGCCCACAGCCGGCCTCCAGG...TGCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GGAAAGGCAGGTGAGCAGGGAGAAGTGCAGGAAGATGGCACTGGCTCGGCAGCCCCTGGAGGCCGGCTGTaGGCTGGAGCTTCCACACCG +
Preference number: 4 (lower is better)
Translates to: GKAGEQGEVQEDGTGSAAPGGRL*AGASTP
Trigger: CGGTGTGGAAGCTCCAGCCCACAGCCGGCCTCCAGG...GGCTGCCGAGCCAGTGCCATCTTCCTGCACTTCTCCCTGCTCACCTGCCTTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
CDS-3UTR CCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCTGGAGGCCGGCTGTaGGCTGGAGCTTCCACACCG +
Preference number: 4 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRPGGRL*AGASTP
Trigger: CGGTGTGGAAGCTCCAGCCCACAGCCGGCCTCCAGG...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp CTGAGGGCCCCTCTGAGGCGTGTGCTTGGTCAGGGTGAGCAAGGGCAATGCAGCTGGATGTGCAGGTCCTaGAGGCCGGCTGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LRAPLRRVLGQGEQGQCSWMCRS*RPAVGW
Trigger: CCAGCCCACAGCCGGCCTCCAGGACCTGCACATCCA...GCTGCATTGCCCTTGCTCACCCTGACCAAGCACACGCCTCAGAGGGGCCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp CAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGTGGATGTGCAGGTCCTaGAGGCCGGCTGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QKPSPGVRPPWQRPISPWWMCRS*RPAVGW
Trigger: CCAGCCCACAGCCGGCCTCCAGGACCTGCACATCCA...CCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TGCCAGACCCTCAAGATCCAAGGCCTGGCCCCCAGCAATGAGGGCTGGGCCCAGTCCTCCTGCCGGGAGTaGATGTGCAGGTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CQTLKIQGLAPSNEGWAQSSCRE*MCRSWR
Trigger: CCTCCAGGACCTGCACATCCACTCCCGGCAGGAGGA...CTGGGCCCAGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGAGGGTCTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGTCCTGGAACAGGGCTTaGCTGCTGAAGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGSWNRA*LLKSTR
Trigger: CCTGGTGGACTTCAGCAGCCAAGCCCTGTTCCAGGA...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCCCGGGCTGCTCAATGTaGGGTCTTCAACCCAGAACA +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQAPGCSM*GLQPRT
Trigger: TGTTCTGGGTTGAAGACCCCACATTGAGCAGCCCGG...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTGCGTCACCAGAAAGATaGGGAAGCCCCAGCCCATGG +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRAASPER*GSPSPW
Trigger: CCATGGGCTGGGGCTTCCCCATCTTTCTGGTGACGC...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TGGACAGAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGGCGTCACCAGAAAGATaGGGAAGCCCCAGCCCATGG +
Preference number: 4 (lower is better)
Translates to: WTEGPSPAHASVPSLAQGASPER*GSPSPW
Trigger: CCATGGGCTGGGGCTTCCCCATCTTTCTGGTGACGC...CCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTCTGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTACATGTGACCACTTTTaGGTGTGGGGGCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRATCDHF*VWGRSR
Trigger: GCGGCTGCGCCCCCACACCCAAAAGTGGTCACATGT...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp CAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGAGGCCTAGATGCGGCTaGACGAGGTGCTGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: QKPSPGVRPPWQRPISPWRPRCG*TRCCPS
Trigger: GCTCGGGCAGCACCTCGTCCAGCCGCATCTAGGCCT...CCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTaGCCTGGGGCTGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GVRPPWQRPISPWSLGFPKSAAD*PGAGPG
Trigger: GCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTT...TGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GCCCTAGGCCAGTGTCACCAGAGGAGGTCAGTCTCAGTCCTTGGAGTGGTGGGAAAGTCTGCGGCTGACTaGCCTGGGGCTGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: ALGQCHQRRSVSVLGVVGKSAAD*PGAGPG
Trigger: GCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTT...TCCCACCACTCCAAGGACTGAGACTGACCTCCTCTGGTGACACTGGCCTAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGTCAAGATCCAAGGCCTaGCCCCCAGCAATGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGSRSKA*PPAMRA
Trigger: AGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGA...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACTTCTGAGTCCCCATCGGTACCGAGCCTaGCTCAGGGGCAGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GQMWGQYPRQHGGALLSPHRYRA*LRGRPR
Trigger: CCTCGGCCTGCCCCTGAGCCAGGCTCGGTACCGATG...GGGACTCAGAAGTGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCCAGTCCTTGGAGTGGTaGGATGGAAACCAGACGGGA +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQAQSLEW*DGNQTG
Trigger: TCCCGTCTGGTTTCCATCCCACCACTCCAAGGACTG...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp GGGGGCCACAGGCAGTGTGCGACGAGGCCGAATCTCTGCTTCATCACATGGGCAGCGGCCGAGGGCGCCTaGAGCTATTTGGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GGHRQCATRPNLCFITWAAAEGA*SYLGAW
Trigger: CCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC...TGCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp GATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAGCGGCCGAGGGCGCCTaGAGCTATTTGGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: DGRPRAPGAIWGLGENLLAAEGA*SYLGAW
Trigger: CCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC...TAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCTGTCTGCTGCCAGGTaGAGGGTCCCACGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRLSAAR*RVPRRA
Trigger: GGCCCTGCGTGGGACCCTCCACCTGGCAGCAGACAG...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562558.6
CDS-3UTR CCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGCTGCTCCTGTGTGTCTaGTTCCGCTGGCTTGGACCA +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGLLLCV*FRWLGP
Trigger: TGGTCCAAGCCAGCGGAACCAGACACACAGGAGCAG...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565539.5
CDS-3UTR CCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGCTGGTTCCGCTGCCTTaGACCAGGAAGAGCAGACTC +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGLVPLP*TRKSRL
Trigger: GAGTCTGCTCTTCCTGGTCCAAGGCAGCGGAACCAG...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564907.5
CDS-3UTR CCA 90 bp CTGAGGGCCCCTCTGAGGCGTGTGCTTGGTCAGGGTGAGCAAGGGCAATGCAGCCAGTCTGAGCTTGTCTaGGCTGGCGGGCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LRAPLRRVLGQGEQGQCSQSELV*AGGQPQ
Trigger: CTGGGGCTGCCCGCCAGCCCAGACAAGCTCAGACTG...GCTGCATTGCCCTTGCTCACCCTGACCAAGCACACGCCTCAGAGGGGCCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568908.5
ENST00000568909.5
CDS-3UTR TCA 90 bp AACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCCGCTGCCTGCCGAGTaGGCTGGAGAGCGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: NGPSLHGRWAFQSLRLTGPLPAE*AGERGR
Trigger: CCTCCCACGCTCTCCAGCTCACTCGGCAGGCAGCGG...GCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGATGGGCCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000562558.6
ENST00000562631.7
ENST00000673126.2
CDS-3UTR TCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCAGGCAGGCTGATGTTCTaGGGGCTCCACCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGAGRLMF*GLHQEV
Trigger: CACCTCCTGGTGGAGCCCTCAGAACATCAGCCTGCC...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAGGAGACGGCACTGGGCAGGCTaGTGTTCTGAGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: AAEGAWSYLGAWREPLRRRHWAG*CSEGST
Trigger: GGTGGAGCCCTCAGAACATCAGCCTGCCCAGTGCCG...TCTCCTAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR TCA 90 bp GGCCAGGGCAGAGACGACACAGCCCACGTAGGAGAGGAGGCTCAGGTAGTGCTTCGGCACTGGGCAGGCTaGTGTTCTGAGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: GQGRDDTAHVGEEAQVVLRHWAG*CSEGST
Trigger: GGTGGAGCCCTCAGAACATCAGCCTGCCCAGTGCCG...AAGCACTACCTGAGCCTCCTCTCCTACGTGGGCTGTGTCGTCTCTGCCCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
CDS-3UTR TCA 90 bp GTCCACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTTCCACCGAGGCATTGTaGGCGGCCGTGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: VHRGIVSGRVGRTVEGEGSTEAL*AAVWGG
Trigger: TCCTCCCCACACGGCCGCTCACAATGCCTCGGTGGA...ACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563007.5
ENST00000564907.5
ENST00000565539.5
ENST00000568645.5
CDS-3UTR TCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGTCCACCGAGGCATTGTaGGCGGCCGTGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRSTEAL*AAVWGG
Trigger: TCCTCCCCACACGGCCGCTCACAATGCCTCGGTGGA...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GGGGGCCACAGGCAGTGTGCGACGAGGCCGAATCTCTGCTTCATCACATGGGCATCCACCGAGGCATTGTaGGCGGCCGTGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GGHRQCATRPNLCFITWASTEAL*AAVWGG
Trigger: TCCTCCCCACACGGCCGCTCACAATGCCTCGGTGGA...TGCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp TGCCAGACCCTCAAGATCCAAGGCCTGGCCCCCAGCAATGAGGGCTGGGCCCAGGCTGGAGGTCCCTTTTaGGCTCGCACATGTCCACCG +
Preference number: 4 (lower is better)
Translates to: CQTLKIQGLAPSNEGWAQAGGPF*ARTCPP
Trigger: CGGTGGACATGTGCGAGCTCAAAAGGGACCTCCAGC...CTGGGCCCAGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGAGGGTCTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp CCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCTCCACACCGTGGCGTTaGTCCGGTCCTCCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: PKANSKAQPGSPSTMATASTPWR*SGPPRR
Trigger: CCTTCGAGGAGGACCGGATCAACGCCACGGTGTGGA...GGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp AGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCGGTAGGCGGCAATGGTaGCAAGGCAGGCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RPIQKPSPGVRPPWQRPIGRRQW*QGRPGQ
Trigger: CTGCCCTGGCCTGCCTTGTCACCATTGCCGCCTACC...GATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GGCCAGGGCAGAGACGACACAGCCCACGTAGGAGAGGAGGCTCAGGTAGTGCTTGGTAGGCGGCAATGGTaGCAAGGCAGGCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GQGRDDTAHVGEEAQVVLGRRQW*QGRPGQ
Trigger: CTGCCCTGGCCTGCCTTGTCACCATTGCCGCCTACC...AAGCACTACCTGAGCCTCCTCTCCTACGTGGGCTGTGTCGTCTCTGCCCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
CDS-3UTR TCA 90 bp GGGGGCCACAGGCAGTGTGCGACGAGGCCGAATCTCTGCTTCATCACATGGGCAGGCCAAGGACCAGGCTaGGGCCCAGCAGTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GGHRQCATRPNLCFITWAGQGPG*GPAVSA
Trigger: TGCTGACACTGCTGGGCCTCAGCCTGGTCCTTGGCC...TGCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GAGAGCCGAGTAGTCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCGGCCAAGGACCAGGCTaGGGCCCAGCAGTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: ESRVVPKANSKAQPGSPSGQGPG*GPAVSA
Trigger: TGCTGACACTGCTGGGCCTCAGCCTGGTCCTTGGCC...GGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGACTACTCGGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAGGAGAGGCCAAGGACCAGGCTaGGGCCCAGCAGTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: AAEGAWSYLGAWREPLRRGQGPG*GPAVSA
Trigger: TGCTGACACTGCTGGGCCTCAGCCTGGTCCTTGGCC...TCTCCTAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR TCA 90 bp GGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACTTCTGAGTCCCGGCCAAGGACCAGGCTaGGGCCCAGCAGTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GQMWGQYPRQHGGALLSPGQGPG*GPAVSA
Trigger: TGCTGACACTGCTGGGCCTCAGCCTGGTCCTTGGCC...GGGACTCAGAAGTGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GCCCTAGGCCAGTGTCACCAGAGGAGGTCAGTCTCAGTCCTTGGAGTGGTGGGATCCAAAGTCTGCGGCTaGCTGGCCTGGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ALGQCHQRRSVSVLGVVGSKVCG*LAWGWA
Trigger: GGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGA...TCCCACCACTCCAAGGACTGAGACTGACCTCCTCTGGTGACACTGGCCTAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR TCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACCCGTGGGAGCTGAGTaGGAGCCGAGTAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGAPVGAE*EPSSPQ
Trigger: TTGGGGACTACTCGGCTCTCACTCAGCTCCCACGGG...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp CCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCATGGCGGCGCACTTCTaGGTCCCGTGGGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: PKANSKAQPGSPSTMATAMAAHF*VPWELS
Trigger: ACTCAGCTCCCACGGGACTCAGAAGTGCGCCGCCAT...GGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAGGAGAGGGGACCCCCAGCTGTaGACGAAGGAGCAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: AAEGAWSYLGAWREPLRRGDPQL*TKEQGG
Trigger: GCCTCCTTGCTCCTTCGTTCACAGCTGGGGGTCCCC...TCTCCTAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR TCA 90 bp AGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCGGGGACCCCCAGCTGTaGACGAAGGAGCAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RPIQKPSPGVRPPWQRPIGDPQL*TKEQGG
Trigger: GCCTCCTTGCTCCTTCGTTCACAGCTGGGGGTCCCC...GATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR TCA 90 bp GGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCACCTGCCGTGGGCACCTaGGGAGGCAGAGGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GVRPPWQRPISPWSLGFPPAVGT*GGRGLD
Trigger: GTCCAAGCCTCTGCCTCCTCAGGTGCCCACGGCAGG...TGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456916.5
CDS-3UTR TCA 90 bp GGCCAGGGCAGAGACGACACAGCCCACGTAGGAGAGGAGGCTCAGGTAGTGCTTCCAGGGAATAGAGGCTaGGAAGCCCCAGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: GQGRDDTAHVGEEAQVVLPGNRG*EAPAAS
Trigger: GCTGGCGGCTGGGGCTTCTCAGCCTCTATTCCCTGG...AAGCACTACCTGAGCCTCCTCTCCTACGTGGGCTGTGTCGTCTCTGCCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565539.5
CDS-3UTR GCA 90 bp GCCCTAGGCCAGTGTCACCAGAGGAGGTCAGTCTCAGTCCTTGGAGTGGTGGGACTGGTCCCCGCTGCCTaGCGAGTGAGCTGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: ALGQCHQRRSVSVLGVVGLVPAA*RVSWRA
Trigger: CGCTCTCCAGCTCACTCGGCAGGCAGCGGGGACCAG...TCCCACCACTCCAAGGACTGAGACTGACCTCCTCTGGTGACACTGGCCTAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000562558.6
ENST00000562631.7
CDS-3UTR GCA 90 bp CACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTGAAAGCCCTGGTCCCCGCTaGCTGCCGAGTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HRGIVSGRVGRTVEGEGESPGPR*LPSELE
Trigger: CTCCAGCTCACTCGGCAGGCAGCGGGGACCAGGGCT...TTCACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563007.5
ENST00000568645.5
CDS-3UTR GCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCGTTTGTAGTGGAGGCTaGTCCTGTGTGTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQAVCSGG*SCVSGS
Trigger: GGAACCAGACACACAGGAGCAGCCTCCACTACAAAC...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp GGCAGCAGCACCGAGTACTCCATGATCTCGCTCTGCTCCTCCTCCTGCCGGGAGTTCGACTCCAGGCTCTaGAACTGCTGGCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GSSTEYSMISLCSSSCREFDSRL*NCWLAG
Trigger: CCCCGCCAGCCAGCAGTTGCAGAGCCTGGAGTCGAA...CTCCCGGCAGGAGGAGGAGCAGAGCGAGATCATGGAGTACTCGGTGCTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
CDS-3UTR GCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCATTCGACTCCAGGCTCTaGAACTGCTGGCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGAFDSRL*NCWLAG
Trigger: CCCCGCCAGCCAGCAGTTGCAGAGCCTGGAGTCGAA...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACTCTGCTCCTCCTCCTaGCGGGAGTGGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGALCSSS*REWMCR
Trigger: CCTGCACATCCACTCCCGGCAGGAGGAGGAGCAGAG...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCATCTCACACCCAGCACTaGTCCAATGCCCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGASHTQH*SNAPGC
Trigger: GCAGCCCGGGGCATTGGAGCAGTGCTGGGTGTGAGA...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGAGCCAGGGACATAGGTaGCAAAGACCTCCACCACGA +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGSQGHR*QRPPPR
Trigger: TCGTGGTGGAGGTCTTTGGCACCTATGTCCCTGGCT...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACGCAGCCGCAGGATCTaGACCACCATGGTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGARSRRI*TTMVAS
Trigger: GCTAGCCACCATGGTGGTGCAGATCCTGCGGCTGCG...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp CCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCGCAGCCGCAGGATCTaGACCACCATGGTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: PKANSKAQPGSPSTMATARSRRI*TTMVAS
Trigger: GCTAGCCACCATGGTGGTGCAGATCCTGCGGCTGCG...GGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp CTGAGGGCCCCTCTGAGGCGTGTGCTTGGTCAGGGTGAGCAAGGGCAATGCAGCCGCAGCCGCAGGATCTaGACCACCATGGTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: LRAPLRRVLGQGEQGQCSRSRRI*TTMVAS
Trigger: GCTAGCCACCATGGTGGTGCAGATCCTGCGGCTGCG...GCTGCATTGCCCTTGCTCACCCTGACCAAGCACACGCCTCAGAGGGGCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp AACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCGGGCCACCCCGGGCCTaGAGCCGCATGGACCAGTAC +
Preference number: 4 (lower is better)
Translates to: NGPSLHGRWAFQSLRLTGGPPRA*SRMDQY
Trigger: GTACTGGTCCATGCGGCTGCAGGCCCGGGGTGGCCC...GCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGATGGGCCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp TGGGAGCTGAGTGAGAGCCGAGTAGTCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGCCACCCCGGGCCTaGAGCCGCATGGACCAGTAC +
Preference number: 4 (lower is better)
Translates to: WELSESRVVPKANSKAQPGPPRA*SRMDQY
Trigger: GTACTGGTCCATGCGGCTGCAGGCCCGGGGTGGCCC...GGGCTGGGCTTTTGAATTGGCCTTGGGGACTACTCGGCTCTCACTCAGCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp ATCTCTCCATGGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCACCCCGGGCCTaGAGCCGCATGGACCAGTAC +
Preference number: 4 (lower is better)
Translates to: ISPWSLGFPKSAADWPGAGPPRA*SRMDQY
Trigger: GTACTGGTCCATGCGGCTGCAGGCCCGGGGTGGCCC...AGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp GGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACTTCTGAGTCCCGGCTGGAGGCCTAGATaGGGCTGGACGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GQMWGQYPRQHGGALLSPGWRPR*GWTRCC
Trigger: GCAGCACCTCGTCCAGCCGCATCTAGGCCTCCAGCC...GGGACTCAGAAGTGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp GAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGCTGGCCCTGAAGGTCTaGCCTGGGCCCCATTCGCCC +
Preference number: 4 (lower is better)
Translates to: ELTMMGGRGRLELFGGLELALKV*PGPHSP
Trigger: GGGCGAATGGGGCCCAGGGCAGACCTTCAGGGCCAG...CTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp CACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTGAACTGGCCCTGAAGGTCTaGCCTGGGCCCCATTCGCCC +
Preference number: 4 (lower is better)
Translates to: HRGIVSGRVGRTVEGEGELALKV*PGPHSP
Trigger: GGGCGAATGGGGCCCAGGGCAGACCTTCAGGGCCAG...TTCACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564907.5
CDS-3UTR GCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCAGGCGAGCTGCTGCTGTaGTCCTGGCAAAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGAGELLL*SWQRAS
Trigger: AGAGGCCCTTTGCCAGGAGCACAGCAGCAGCTCGCC...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp CAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGGAAGTCACCACCTGCTaGCAGGTGGAGGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: QKPSPGVRPPWQRPISPWEVTTC*QVEGPT
Trigger: CGTGGGACCCTCCACCTGGCAGCAGGTGGTGACTTC...CCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456916.5
ENST00000562631.7
ENST00000673126.2
CDS-3UTR GCA 90 bp GGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCACTTCCCTGTGGCCCCTaGCGTGGGCACCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GVRPPWQRPISPWSLGFPLPCGP*RGHLRR
Trigger: CCTCCTCAGGTGCCCACGGCAGGGGCCACAGGGAAG...TGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456916.5
CDS-3UTR GCA 90 bp GTCCACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTAGAGCGAGACCCTGCTaGCAGGTGGAGGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: VHRGIVSGRVGRTVEGEGRARPC*QVEGPT
Trigger: CGTGGGACCCTCCACCTGGCAGCAGGGTCTCGCTCT...ACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568645.5
CDS-3UTR GCA 90 bp GGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACTTCTGAGTCCCTCCCTCACCGGCCTGTaGCTGTGTGGCCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GQMWGQYPRQHGGALLSPSLTGL*LCGLLL
Trigger: GAGGAGCAGGCCACACAGGCACAGGCCGGTGAGGGA...GGGACTCAGAAGTGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp GGGGCCACAGGCAGTGTGCGACGAGGCCGAATCTCTGCTTCATCACATGGGCAGCTGCCCCACAGCCACTaGAGCCGCCACCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: GATGSVRRGRISASSHGQLPHSH*SRHPLL
Trigger: CAAGAGAGGGTGGCGGCTGCAGTGGCTGTGGGGCAG...CTGCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568908.5
CDS-3UTR GCA 90 bp GGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCACGCCCCATTTCCGGCTaGCCCACAGCCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GVRPPWQRPISPWSLGFPRPISG*PTATAA
Trigger: GGCTGCAGTGGCTGTGGGGCAGCCGGAAATGGGGCG...TGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568908.5
CDS-3UTR CCA 90 bp CACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTGAAGCCTGCCGAGTGAGCTaGAGAGCGTGGGAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: HRGIVSGRVGRTVEGEGEACRVS*RAWEAP
Trigger: GGGAGCCTCCCACGCTCTCCAGCTCACTCGGCAGGC...TTCACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563007.5
ENST00000568645.5
CDS-3UTR CCA 90 bp GATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTACTGTGGCCCCTGCCGTaGGCACCTTGGACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: DGRPRAPGAIWGLGENLLLWPLP*APWTRK
Trigger: CTTCCTGGTCCAAGGTGCCCACGGCAGGGGCCACAG...TAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000388813.9
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp CAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGCGAAAGTCTTCCCTGTaGCCCCTGCCGTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: QKPSPGVRPPWQRPISPWRKSSL*PLPWAP
Trigger: AGGTGCCCACGGCAGGGGCCACAGGGAAGACTTTCG...CCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGGGGGAGATGCGCAGGTCTaGTGTGGGTTTGTAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LGFPKSAADWPGAGPGSGGDAQV*CGFVVE
Trigger: CTCCACTACAAACCCACACCAGACCTGCGCATCTCC...CCCCGAGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCAAGTGGTAGAGGCCCCTaGGGTCAGGGAAGGATCGGG +
Preference number: 4 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGASGRGP*GQGRIG
Trigger: CCCGATCCTTCCCTGACCCCAGGGGCCTCTACCACT...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GGCAGCAGCACCGAGTACTCCATGATCTCGCTCTGCTCCTCCTCCTGCCGGGAGGCCAGGCTCTCCTCCTaGTGCTGGAAGCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GSSTEYSMISLCSSSCREARLSS*CWKQRR
Trigger: CCTCCTCTGCTTCCAGCACCAGGAGGAGAGCCTGGC...CTCCCGGCAGGAGGAGGAGCAGAGCGAGATCATGGAGTACTCGGTGCTGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
CDS-3UTR CCA 90 bp TGGACAGAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGGGATGCTTCAGGAACTaGCTGAGCAGCTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: WTEGPSPAHASVPSLAQGGCFRN*LSSWRS
Trigger: GGACCTCCAGCTGCTCAGCCAGTTCCTGAAGCATCC...CCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTCTGTCCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp ATCTCTCCATGGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTTCTGCAACTGCTGGCTaGCGGGGGCAGCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: ISPWSLGFPKSAADWPGASATAG*RGQPRA
Trigger: GGCCCTCGGCTGCCCCCGCCAGCCAGCAGTTGCAGA...AGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCACCTGGAGGCCGGCTGTaGGCTGGAGCTTCCACACCG +
Preference number: 4 (lower is better)
Translates to: GVRPPWQRPISPWSLGFPPGGRL*AGASTP
Trigger: CGGTGTGGAAGCTCCAGCCCACAGCCGGCCTCCAGG...TGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGTGGATGTGCAGGTCCTaGAGGCCGGCTGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRWMCRS*RPAVGW
Trigger: CCAGCCCACAGCCGGCCTCCAGGACCTGCACATCCA...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCGGCCTTTCGTCCTCTaGAAGAGTGTTCGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRARPFVL*KSVRGS
Trigger: GCTGCCTCGAACACTCTTCCAGAGGACGAAAGGCCG...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TGCCAGACCCTCAAGATCCAAGGCCTGGCCCCCAGCAATGAGGGCTGGGCCCAGGGCTGTAGCTGGTGCTaGAAAGTGAGCACCACGGGC +
Preference number: 4 (lower is better)
Translates to: CQTLKIQGLAPSNEGWAQGCSWC*KVSTTG
Trigger: GCCCGTGGTGCTCACTTTCCAGCACCAGCTACAGCC...CTGGGCCCAGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGAGGGTCTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TGGACAGAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGAGAAGTGCAGGAAGATaGCACTGGCTCGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: WTEGPSPAHASVPSLAQGRSAGR*HWLGSQ
Trigger: CTGGCTGCCGAGCCAGTGCCATCTTCCTGCACTTCT...CCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTCTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTAGAAGTGCAGGAAGATaGCACTGGCTCGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRARSAGR*HWLGSQ
Trigger: CTGGCTGCCGAGCCAGTGCCATCTTCCTGCACTTCT...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TGCCAGACCCTCAAGATCCAAGGCCTGGCCCCCAGCAATGAGGGCTGGGCCCAGGCGTCACCAGAAAGATaGGGAAGCCCCAGCCCATGG +
Preference number: 4 (lower is better)
Translates to: CQTLKIQGLAPSNEGWAQASPER*GSPSPW
Trigger: CCATGGGCTGGGGCTTCCCCATCTTTCTGGTGACGC...CTGGGCCCAGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGAGGGTCTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp CAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGGACCACTTTTGGGTGTaGGGGCGCAGCCGCAGGATC +
Preference number: 4 (lower is better)
Translates to: QKPSPGVRPPWQRPISPWDHFWV*GRSRRI
Trigger: GATCCTGCGGCTGCGCCCCCACACCCAAAAGTGGTC...CCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp CCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCGACCACTTTTGGGTGTaGGGGCGCAGCCGCAGGATC +
Preference number: 4 (lower is better)
Translates to: PKANSKAQPGSPSTMATADHFWV*GRSRRI
Trigger: GATCCTGCGGCTGCGCCCCCACACCCAAAAGTGGTC...GGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp TGCCAGACCCTCAAGATCCAAGGCCTGGCCCCCAGCAATGAGGGCTGGGCCCAGACATGTGACCACTTTTaGGTGTGGGGGCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: CQTLKIQGLAPSNEGWAQTCDHF*VWGRSR
Trigger: GCGGCTGCGCCCCCACACCCAAAAGTGGTCACATGT...CTGGGCCCAGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGAGGGTCTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GGGGCCACAGGCAGTGTGCGACGAGGCCGAATCTCTGCTTCATCACATGGGCAGAGGCCTAGATGCGGCTaGACGAGGTGCTGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: GATGSVRRGRISASSHGQRPRCG*TRCCPS
Trigger: GCTCGGGCAGCACCTCGTCCAGCCGCATCTAGGCCT...CTGCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAAGGCCTAGATGCGGCTaGACGAGGTGCTGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: DGRPRAPGAIWGLGENLLRPRCG*TRCCPS
Trigger: GCTCGGGCAGCACCTCGTCCAGCCGCATCTAGGCCT...TAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp GCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAGGAGAAGGCCTAGATGCGGCTaGACGAGGTGCTGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: AAEGAWSYLGAWREPLRRRPRCG*TRCCPS
Trigger: GCTCGGGCAGCACCTCGTCCAGCCGCATCTAGGCCT...TCTCCTAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp CAACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGAAGTCTGCGGCTGACTaGCCTGGGGCTGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: QRPISPWSLGFPKSAADWKSAAD*PGAGPG
Trigger: GCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTT...CCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTGGGTTGGGACAGATGTaGGGACAGTACCCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRAGLGQM*GQYPRQ
Trigger: CTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCC...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp CAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGGACCAGGCCTCCAGCTaGGTTGGGACAGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: QKPSPGVRPPWQRPISPWDQASS*VGTDVG
Trigger: CCCCACATCTGTCCCAACCCAGCTGGAGGCCTGGTC...CCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp CTGAGGGCCCCTCTGAGGCGTGTGCTTGGTCAGGGTGAGCAAGGGCAATGCAGCGACCAGGCCTCCAGCTaGGTTGGGACAGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: LRAPLRRVLGQGEQGQCSDQASS*VGTDVG
Trigger: CCCCACATCTGTCCCAACCCAGCTGGAGGCCTGGTC...GCTGCATTGCCCTTGCTCACCCTGACCAAGCACACGCCTCAGAGGGGCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTTCAAGATCCAAGGCCTaGCCCCCAGCAATGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRASRSKA*PPAMRA
Trigger: AGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGA...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GGGGGCCACAGGCAGTGTGCGACGAGGCCGAATCTCTGCTTCATCACATGGGCACCTGAAGGTCTGCCCTaGGCCCCATTCGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GGHRQCATRPNLCFITWAPEGLP*APFALG
Trigger: ACCCAGGGCGAATGGGGCCCAGGGCAGACCTTCAGG...TGCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp GATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTACCTGAAGGTCTGCCCTaGGCCCCATTCGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: DGRPRAPGAIWGLGENLLPEGLP*APFALG
Trigger: ACCCAGGGCGAATGGGGCCCAGGGCAGACCTTCAGG...TAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCATACAAAGGCCCAGATaGACAGAGGGACCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQAIQRPR*TEGPSP
Trigger: TGGGCTAGGTCCCTCTGTCCATCTGGGCCTTTGTAT...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCTTGGAGTGGTGGGATaGAAACCAGACGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRALGVVG*KPDGTG
Trigger: GCCAGTCCCGTCTGGTTTCCATCCCACCACTCCAAG...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR CCA 90 bp TGGCAACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACCCACCTGCTGCCAGGTaGAGGGTCCCACGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WQRPISPWSLGFPKSAADPPAAR*RVPRRA
Trigger: GGCCCTGCGTGGGACCCTCCACCTGGCAGCAGGTGG...GTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456916.5
ENST00000562631.7
ENST00000673126.2
CDS-3UTR CCA 90 bp GGGGCCACAGGCAGTGTGCGACGAGGCCGAATCTCTGCTTCATCACATGGGCAGAGCCTGCGGGGCTGGTaGGTCAATGTCCCCCGACCA +
Preference number: 4 (lower is better)
Translates to: GATGSVRRGRISASSHGQSLRGW*VNVPRP
Trigger: TGGTCGGGGGACATTGACCCACCAGCCCCGCAGGCT...CTGCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000540164.6
ENST00000565539.5
ENST00000565976.6
CDS-3UTR CCA 90 bp GTGGGCTGGAGCTTCCACACCGTGGCGTTGATCCGGTCCTCCTCGAAGGACACCAGTAGCCTGCGGGGCTaGTGGGTCAATGTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: VGWSFHTVALIRSSSKDTSSLRG*WVNVPR
Trigger: TCGGGGGACATTGACCCACCAGCCCCGCAGGCTACT...GGTGTCCTTCGAGGAGGACCGGATCAACGCCACGGTGTGGAAGCTCCAGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565539.5
CDS-3UTR CCA 90 bp CTGAGGGCCCCTCTGAGGCGTGTGCTTGGTCAGGGTGAGCAAGGGCAATGCAGCAGTCCTTGGGTTCTCTaGGTCTCAGCGGCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: LRAPLRRVLGQGEQGQCSSPWVL*VSAAAQ
Trigger: CTGGGCGGCCGCTGAGACCCAGAGAACCCAAGGACT...GCTGCATTGCCCTTGCTCACCCTGACCAAGCACACGCCTCAGAGGGGCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564907.5
CDS-3UTR CCA 90 bp GAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGCAGGCCCGACGGAGTCACTCTTaGAAGTCACCACCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: EGPSPAHASVPSLAQGQARRSHS*KSPPLR
Trigger: ACGAAGAGGTGGTGACTTCCAAGAGTGACTCCGTCG...GGCCTGCCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564907.5
3UTR CAA 72 bp CTGGAGCTGATGAGCAGCCACGCTCTCAGCATGGGGTaGGGAGTCTCCAGTTCGCCACAGGCCCCACCACTC +
Preference number: 4 (lower is better)
Translates to: LELMSSHALSMG*GVSSSPQAPPL
Trigger: GAGTGGTGGGGCCTGTGGCGAACTGGAGACTCCCAACCCCATGCTGAGAGCGTGGCTGCTCATCAGCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562631.7
ENST00000568909.5
CDS-3UTR TCA 90 bp TTCTCAGCCTCCCCGCTCCGGCCTTTCGTCCTCTGGAAGAGTGTTCGAGGCAGCGGCAGGCTGATGTTCTaGGGGCTCCACCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: FSASPLRPFVLWKSVRGSGRLMF*GLHQEV
Trigger: CACCTCCTGGTGGAGCCCTCAGAACATCAGCCTGCC...GCTGCCTCGAACACTCTTCCAGAGGACGAAAGGCCGGAGCGGGGAGGCTGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
CDS-3UTR TCA 90 bp GGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACTTCTGAGTCCCGGCAGGCTGATGTTCTaGGGGCTCCACCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GQMWGQYPRQHGGALLSPGRLMF*GLHQEV
Trigger: CACCTCCTGGTGGAGCCCTCAGAACATCAGCCTGCC...GGGACTCAGAAGTGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGGGCAGGCTGATGTTCTaGGGGCTCCACCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRGRLMF*GLHQEV
Trigger: CACCTCCTGGTGGAGCCCTCAGAACATCAGCCTGCC...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCACGGCACTGGGCAGGCTaGTGTTCTGAGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: GVRPPWQRPISPWSLGFPRHWAG*CSEGST
Trigger: GGTGGAGCCCTCAGAACATCAGCCTGCCCAGTGCCG...TGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCATCCACCGAGGCATTGTaGGCGGCCGTGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GVRPPWQRPISPWSLGFPSTEAL*AAVWGG
Trigger: TCCTCCCCACACGGCCGCTCACAATGCCTCGGTGGA...TGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp CACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTGAATCCACCGAGGCATTGTaGGCGGCCGTGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: HRGIVSGRVGRTVEGEGESTEAL*AAVWGG
Trigger: TCCTCCCCACACGGCCGCTCACAATGCCTCGGTGGA...TTCACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563007.5
ENST00000564907.5
ENST00000565539.5
ENST00000568645.5
CDS-3UTR TCA 90 bp CTGAGGGCCCCTCTGAGGCGTGTGCTTGGTCAGGGTGAGCAAGGGCAATGCAGCGCTGGAGGTCCCTTTTaGGCTCGCACATGTCCACCG +
Preference number: 4 (lower is better)
Translates to: LRAPLRRVLGQGEQGQCSAGGPF*ARTCPP
Trigger: CGGTGGACATGTGCGAGCTCAAAAGGGACCTCCAGC...GCTGCATTGCCCTTGCTCACCCTGACCAAGCACACGCCTCAGAGGGGCCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR TCA 90 bp CAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGGCTGGAGGTCCCTTTTaGGCTCGCACATGTCCACCG +
Preference number: 4 (lower is better)
Translates to: QKPSPGVRPPWQRPISPWAGGPF*ARTCPP
Trigger: CGGTGGACATGTGCGAGCTCAAAAGGGACCTCCAGC...CCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GAGAGCCGAGTAGTCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCTCCACACCGTGGCGTTaGTCCGGTCCTCCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: ESRVVPKANSKAQPGSPSSTPWR*SGPPRR
Trigger: CCTTCGAGGAGGACCGGATCAACGCCACGGTGTGGA...GGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGACTACTCGGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp AGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCTCCACACCGTGGCGTTaGTCCGGTCCTCCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: RPIQKPSPGVRPPWQRPISTPWR*SGPPRR
Trigger: CCTTCGAGGAGGACCGGATCAACGCCACGGTGTGGA...GATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GGGGCCACAGGCAGTGTGCGACGAGGCCGAATCTCTGCTTCATCACATGGGCAGTCCACACCGTGGCGTTaGTCCGGTCCTCCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: GATGSVRRGRISASSHGQSTPWR*SGPPRR
Trigger: CCTTCGAGGAGGACCGGATCAACGCCACGGTGTGGA...CTGCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp CAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGGCACCACGGGCTCCGTaGGGTTGGCTACTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: QKPSPGVRPPWQRPISPWAPRAP*GWLLWC
Trigger: ACACCAAAGTAGCCAACCTCACGGAGCCCGTGGTGC...CCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp CCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCGCACCACGGGCTCCGTaGGGTTGGCTACTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: PKANSKAQPGSPSTMATAAPRAP*GWLLWC
Trigger: ACACCAAAGTAGCCAACCTCACGGAGCCCGTGGTGC...GGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp TGGACAGAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGTTTGGGTTTCTCTCCTaGCGGTCTCACACCCAGCAC +
Preference number: 4 (lower is better)
Translates to: WTEGPSPAHASVPSLAQGFGFLS*RSHTQH
Trigger: GTGCTGGGTGTGAGACCGTCAGGAGAGAAACCCAAA...CCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTCTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR TCA 90 bp ATCTCTCCATGGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCACCGGCTCGCTaGGCAGGAAGCTCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ISPWSLGFPKSAADWPGAGPPAR*AGSSCP
Trigger: TGGACACGAGCTTCCTGCTCAGCGAGCCGGTGGCCC...AGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp CAACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGGGGCCACCGGCTCGCTaGGCAGGAAGCTCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: QRPISPWSLGFPKSAADWGPPAR*AGSSCP
Trigger: TGGACACGAGCTTCCTGCTCAGCGAGCCGGTGGCCC...CCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp CACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTGAAGGCCAAGGACCAGGCTaGGGCCCAGCAGTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: HRGIVSGRVGRTVEGEGEGQGPG*GPAVSA
Trigger: TGCTGACACTGCTGGGCCTCAGCCTGGTCCTTGGCC...TTCACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
CDS-3UTR TCA 90 bp GACCACGAGAGACAGAGCAACTGGAGCCACATTTCTGTCCCAGGCAGGGGCACATCCAAAGTCTGCGGCTaGCTGGCCTGGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: DHERQSNWSHISVPGRGTSKVCG*LAWGWA
Trigger: GGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGA...TGTGCCCCTGCCTGGGACAGAAATGTGGCTCCAGTTGCTCTGTCTCTCGTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp AACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCTCCAAAGTCTGCGGCTaGCTGGCCTGGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NGPSLHGRWAFQSLRLTGSKVCG*LAWGWA
Trigger: GGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGA...GCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACCATGGAGAGATGGGCCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACTTCTGAGTCCCCCCGTGGGAGCTGAGTaGGAGCCGAGTAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GQMWGQYPRQHGGALLSPPVGAE*EPSSPQ
Trigger: TTGGGGACTACTCGGCTCTCACTCAGCTCCCACGGG...GGGACTCAGAAGTGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp AGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCCCCGTGGGAGCTGAGTaGGAGCCGAGTAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: RPIQKPSPGVRPPWQRPIPVGAE*EPSSPQ
Trigger: TTGGGGACTACTCGGCTCTCACTCAGCTCCCACGGG...GATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAGGAGAATGGCGGCGCACTTCTaGGTCCCGTGGGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: AAEGAWSYLGAWREPLRRMAAHF*VPWELS
Trigger: ACTCAGCTCCCACGGGACTCAGAAGTGCGCCGCCAT...TCTCCTAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR TCA 90 bp TCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGATGGCGGCGCACTTCTaGGTCCCGTGGGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SPRPIQKPSPGVRPPWQRMAAHF*VPWELS
Trigger: ACTCAGCTCCCACGGGACTCAGAAGTGCGCCGCCAT...CCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR TCA 90 bp GAATTAACCATGATGGGCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGGGGGACCCCCAGCTGTaGACGAAGGAGCAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ELTMMGGRGRLELFGGLEGDPQL*TKEQGG
Trigger: GCCTCCTTGCTCCTTCGTTCACAGCTGGGGGTCCCC...CTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGCCCATCATGGTTAATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR TCA 90 bp TGCCAGACCCTCAAGATCCAAGGCCTGGCCCCCAGCAATGAGGGCTGGGCCCAGTGTGCTTGGTCAGGGTaGGCAAGGGCAATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: CQTLKIQGLAPSNEGWAQCAWSG*ARAMQL
Trigger: GAGCTGCATTGCCCTTGCTCACCCTGACCAAGCACA...CTGGGCCCAGCCCTCATTGCTGGGGGCCAGGCCTTGGATCTTGAGGGTCTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR TCA 90 bp TGGACAGAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGATTCCCAGGCAGGAATaGTGGCTCCCTGTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: WTEGPSPAHASVPSLAQGIPRQE*WLPVPV
Trigger: TACAGGGACAGGGAGCCATCATTCCTGCCTGGGAAT...CCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTCTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR TCA 90 bp TGGACAGAGGGACCTAGCCCAGCCCACGCATCGGTACCGAGCCTGGCTCAGGGGAACGTGCGTGGCAGATaGGGGGTTCTTGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: WTEGPSPAHASVPSLAQGNVRGR*GVLVCR
Trigger: CCTGCAAACAAGAACCCCTCATCTGCCACGCACGTT...CCCCTGAGCCAGGCTCGGTACCGATGCGTGGGCTGGGCTAGGTCCCTCTGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540164.6
CDS-3UTR GCA 90 bp GAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCAAAGCCCTGGTCCCCGCTaGCTGCCGAGTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ESVHHGNGPSLHGRWAFQSPGPR*LPSELE
Trigger: CTCCAGCTCACTCGGCAGGCAGCGGGGACCAGGGCT...TTGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000562558.6
ENST00000562631.7
ENST00000673126.2
CDS-3UTR GCA 90 bp GGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACTTCTGAGTCCCTTCGACTCCAGGCTCTaGAACTGCTGGCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GQMWGQYPRQHGGALLSPFDSRL*NCWLAG
Trigger: CCCCGCCAGCCAGCAGTTGCAGAGCCTGGAGTCGAA...GGGACTCAGAAGTGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp GCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAGGAGATTCGACTCCAGGCTCTaGAACTGCTGGCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: AAEGAWSYLGAWREPLRRFDSRL*NCWLAG
Trigger: CCCCGCCAGCCAGCAGTTGCAGAGCCTGGAGTCGAA...TCTCCTAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp GAGAGCCGAGTAGTCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCCTCTGCTCCTCCTCCTaGCGGGAGTGGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: ESRVVPKANSKAQPGSPSLCSSS*REWMCR
Trigger: CCTGCACATCCACTCCCGGCAGGAGGAGGAGCAGAG...GGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGACTACTCGGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp GGAGCTGATGAGCAGCCACGCTCTCAGCATGGGGTTGGGAGTCTCCAGTTCGCCCTCTGCTCCTCCTCCTaGCGGGAGTGGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GADEQPRSQHGVGSLQFALCSSS*REWMCR
Trigger: CCTGCACATCCACTCCCGGCAGGAGGAGGAGCAGAG...GGCGAACTGGAGACTCCCAACCCCATGCTGAGAGCGTGGCTGCTCATCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562631.7
ENST00000568909.5
CDS-3UTR GCA 90 bp GGGGCCACAGGCAGTGTGCGACGAGGCCGAATCTCTGCTTCATCACATGGGCAGCTCTGCTCCTCCTCCTaGCGGGAGTGGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GATGSVRRGRISASSHGQLCSSS*REWMCR
Trigger: CCTGCACATCCACTCCCGGCAGGAGGAGGAGCAGAG...CTGCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp CCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCTCCATGATCTCGCTCTaGTCCTCCTCCTGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: PKANSKAQPGSPSTMATASMISL*SSSCRE
Trigger: CTCCCGGCAGGAGGAGGAGCAGAGCGAGATCATGGA...GGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACCAGCACTGCTCCAATaGCCCGGGCTGCTCAATGTG +
Preference number: 4 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGAPALLQ*PGLLNV
Trigger: CACATTGAGCAGCCCGGGGCATTGGAGCAGTGCTGG...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp GTGGGCTGGAGCTTCCACACCGTGGCGTTGATCCGGTCCTCCTCGAAGGACACCCCAGCACTGCTCCAATaGCCCGGGCTGCTCAATGTG +
Preference number: 4 (lower is better)
Translates to: VGWSFHTVALIRSSSKDTPALLQ*PGLLNV
Trigger: CACATTGAGCAGCCCGGGGCATTGGAGCAGTGCTGG...GGTGTCCTTCGAGGAGGACCGGATCAACGCCACGGTGTGGAAGCTCCAGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564907.5
ENST00000565539.5
CDS-3UTR GCA 90 bp GCGGCCGAGGGCGCCTGGAGCTATTTGGGGGCTTGGAGAGAACCTCTTAGGAGATCTCACACCCAGCACTaGTCCAATGCCCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: AAEGAWSYLGAWREPLRRSHTQH*SNAPGC
Trigger: GCAGCCCGGGGCATTGGAGCAGTGCTGGGTGTGAGA...TCTCCTAAGAGGTTCTCTCCAAGCCCCCAAATAGCTCCAGGCGCCCTCGGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTAGCCAGGGACATAGGTaGCAAAGACCTCCACCACGA +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRASQGHR*QRPPPR
Trigger: TCGTGGTGGAGGTCTTTGGCACCTATGTCCCTGGCT...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp GGTCGTTGGGCTTTCCAAAGTCTGCGGCTGACTGGCCTGGGGCTGGGCCGGGCTCCCTCTGGAGTCCTATaGACAGCCAAGATGATGGGG +
Preference number: 4 (lower is better)
Translates to: GRWAFQSLRLTGLGLGRAPSGVL*TAKMMG
Trigger: CCCCATCATCTTGGCTGTGCATAGGACTCCAGAGGG...AGCCCGGCCCAGCCCCAGGCCAGTCAGCCGCAGACTTTGGAAAGCCCAACGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp GGGGCCACAGGCAGTGTGCGACGAGGCCGAATCTCTGCTTCATCACATGGGCAGCGCAGCCGCAGGATCTaGACCACCATGGTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: GATGSVRRGRISASSHGQRSRRI*TTMVAS
Trigger: GCTAGCCACCATGGTGGTGCAGATCCTGCGGCTGCG...CTGCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp CCAGCTGGGTTGGGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCATGGCGCTGTCTGAGTTaGTCTTCAGAGGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PAGLGQMWGQYPRQHGGAWRCLS*SSEGRG
Trigger: GCCCCTCCCCTCTGAAGAGCAACTCAGACAGCGCCA...TGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCCCAACCCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp GGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACTTCTGAGTCCCGGGCCACAGGCAGTGTaGGACGAGGCCGAATCTCTG +
Preference number: 4 (lower is better)
Translates to: GQMWGQYPRQHGGALLSPGPQAV*DEAESL
Trigger: CAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCC...GGGACTCAGAAGTGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000565539.5
ENST00000565976.6
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR GCA 90 bp GAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCAACTGGCCCTGAAGGTCTaGCCTGGGCCCCATTCGCCC +
Preference number: 4 (lower is better)
Translates to: ESVHHGNGPSLHGRWAFQLALKV*PGPHSP
Trigger: GGGCGAATGGGGCCCAGGGCAGACCTTCAGGGCCAG...TTGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp GGGGGCCACAGGCAGTGTGCGACGAGGCCGAATCTCTGCTTCATCACATGGGCAGGCGAGCTGCTGCTGTaGTCCTGGCAAAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GGHRQCATRPNLCFITWAGELLL*SWQRAS
Trigger: AGAGGCCCTTTGCCAGGAGCACAGCAGCAGCTCGCC...TGCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp GGACAGATGTGGGGACAGTACCCTAGGCAGCATGGCGGCGCACTTCTGAGTCCCGGCGAGCTGCTGCTGTaGTCCTGGCAAAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GQMWGQYPRQHGGALLSPGELLL*SWQRAS
Trigger: AGAGGCCCTTTGCCAGGAGCACAGCAGCAGCTCGCC...GGGACTCAGAAGTGCGCCGCCATGCTGCCTAGGGTACTGTCCCCACATCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp GAGAGCCGAGTAGTCCCCAAGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCGGCGAGCTGCTGCTGTaGTCCTGGCAAAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: ESRVVPKANSKAQPGSPSGELLL*SWQRAS
Trigger: AGAGGCCCTTTGCCAGGAGCACAGCAGCAGCTCGCC...GGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCTTGGGGACTACTCGGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000388813.9
ENST00000456916.5
ENST00000540164.6
ENST00000562558.6
ENST00000562631.7
ENST00000564907.5
ENST00000567835.5
ENST00000568908.5
ENST00000568909.5
CDS-3UTR GCA 90 bp GGGGCCACAGGCAGTGTGCGACGAGGCCGAATCTCTGCTTCATCACATGGGCAGGAAGTCACCACCTGCTaGCAGGTGGAGGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: GATGSVRRGRISASSHGQEVTTC*QVEGPT
Trigger: CGTGGGACCCTCCACCTGGCAGCAGGTGGTGACTTC...CTGCCCATGTGATGAAGCAGAGATTCGGCCTCGTCGCACACTGCCTGTGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000456916.5
ENST00000562631.7
ENST00000673126.2
CDS-3UTR GCA 90 bp AGGCCAATTCAAAAGCCCAGCCCGGGAGTCCGTCCACCATGGCAACGGCCCATCGGCCACCCCAGCCACTaGTCCCTCACTGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RPIQKPSPGVRPPWQRPIGHPSH*SLTGAS
Trigger: TGAAGCTCCAGTGAGGGAGCAGTGGCTGGGGTGGCC...GATGGGCCGTTGCCATGGTGGACGGACTCCCGGGCTGGGCTTTTGAATTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565539.5
ENST00000565976.6
CDS-3UTR GCA 90 bp GCCCTAGGCCAGTGTCACCAGAGGAGGTCAGTCTCAGTCCTTGGAGTGGTGGGACGAGACCCTGTCTGCTaGCAGGTGGAGGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: ALGQCHQRRSVSVLGVVGRDPVC*QVEGPT
Trigger: CGTGGGACCCTCCACCTGGCAGCAGACAGGGTCTCG...TCCCACCACTCCAAGGACTGAGACTGACCTCCTCTGGTGACACTGGCCTAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562558.6
CDS-3UTR GCA 90 bp CACCGAGGCATTGTGAGCGGCCGTGTGGGGAGGACTGTGGAAGGAGAAGGTGAAGACAGAGCGAGACCCTaGTGCCAGGTGGAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: HRGIVSGRVGRTVEGEGEDRARP*CQVEGP
Trigger: GGGACCCTCCACCTGGCAGCAGGGTCTCGCTCTGTC...TTCACCTTCTCCTTCCACAGTCCTCCCCACACGGCCGCTCACAATGCCTCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568645.5
CDS-3UTR GCA 90 bp GAGTCCGTCCACCATGGCAACGGCCCATCTCTCCATGGTCGTTGGGCTTTCCAACCCGAGGTTTCCTCCTaGACGGCAGGGGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: ESVHHGNGPSLHGRWAFQPEVSS*TAGAPW
Trigger: CCAGGGTGCCCCTGCCGTGCAGGAGGAAACCTCGGG...TTGGAAAGCCCAACGACCATGGAGAGATGGGCCGTTGCCATGGTGGACGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564907.5
ENST00000565976.6
ENST00000567835.5
ENST00000568909.5
ENST00000673126.2
CDS-3UTR CCA 90 bp GACCACGAGAGACAGAGCAACTGGAGCCACATTTCTGTCCCAGGCAGGGGCACAGCCTGCCGAGTGAGCTaGAGAGCGTGGGAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: DHERQSNWSHISVPGRGTACRVS*RAWEAP
Trigger: GGGAGCCTCCCACGCTCTCCAGCTCACTCGGCAGGC...TGTGCCCCTGCCTGGGACAGAAATGTGGCTCCAGTTGCTCTGTCTCTCGTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388813.9
ENST00000456916.5