RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRF5 (Homo sapiens)

Ensembl gene IDs: ENSG00000069122

Ensembl transcript IDs: ENST00000265417.7, ENST00000283296.12, ENST00000478711.1, ENST00000498632.1

Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GGACTCTCAGGGCTGCTGGGAACGTTTGAGAACCGGCATAGCTTCTaGATGACTTTCCCCGGCTCTCCGACACCTATTACGGGATCCTGG +
Preference number: 5 (lower is better)
Translates to: GLSGLLGTFENRHSF*MTFPGSPTPITGSW
Trigger: CCAGGATCCCGTAATAGGTGTCGGAGAGCCGGGGAAAGTCATCCAGAAGCTATGCCGGTTCTCAAACGTTCCCAGCAGCCCTGAGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265417.7
ENST00000283296.12
ENST00000498632.1
CDS TCA 90 bp TCTCAGGGCTGCTGGGAACGTTTGAGAACCGGCATAGCTTCTGGATaGCTTTCCCCGGCTCTCCGACACCTATTACGGGATCCTGGCATG +
Preference number: 5 (lower is better)
Translates to: SQGCWERLRTGIASG*LSPALRHLLRDPGM
Trigger: CATGCCAGGATCCCGTAATAGGTGTCGGAGAGCCGGGGAAAGTCATCCAGAAGCTATGCCGGTTCTCAAACGTTCCCAGCAGCCCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265417.7
ENST00000283296.12
ENST00000498632.1
CDS CCA 90 bp GTGAACCTCGAGGGCATCCCATTCAATCACACAGCCAGAGGAGGGTaGGGTTTCACAAGACCAGACTTCAAATGCTGGGGCTCTTGCGGG +
Preference number: 5 (lower is better)
Translates to: VNLEGIPFNHTARGG*GFTRPDFKCWGSCG
Trigger: CCCGCAAGAGCCCCAGCATTTGAAGTCTGGTCTTGTGAAACCCCACCCTCCTCTGGCTGTGTGATTGAATGGGATGCCCTCGAGGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265417.7
CDS TCA 90 bp AGTCATTTCTCTTCTCCTCCCACTGGGAGCCTACACATTTGTAAGTaGTGGTCCCGCCAATGGGACTCTCAGGGCTGCTGGGAACGTTTG +
Preference number: 5 (lower is better)
Translates to: SHFSSPPTGSLHICK*WSRQWDSQGCWERL
Trigger: CAAACGTTCCCAGCAGCCCTGAGAGTCCCATTGGCGGGACCATCACTTACAAATGTGTAGGCTCCCAGTGGGAGGAGAAGAGAAATGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265417.7
ENST00000283296.12
ENST00000498632.1
CDS CCA 90 bp GATGAACTCACAAGTGTAGATGACTGTTGTTCCAGACGACCCGCTTaGGCACTGGGTTCCATCAGCCTTGAGGGTGTATCTGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: DELTSVDDCCSRRPA*ALGSISLEGVSAAA
Trigger: AGCTGCAGCAGATACACCCTCAAGGCTGATGGAACCCAGTGCCCAAGCGGGTCGTCTGGAACAACAGTCATCTACACTTGTGAGTTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS TCA 90 bp TTTAACACCTTACTGCTGATCTGCCCAAAACCCTCTCAGGTGAGGTaGACCTCGAGGGCATCCCATTCAATCACACAGCCAGAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: FNTLLLICPKPSQVR*TSRASHSITQPEEG
Trigger: ACCCTCCTCTGGCTGTGTGATTGAATGGGATGCCCTCGAGGTTCACCTCACCTGAGAGGGTTTTGGGCAGATCAGCAGTAAGGTGTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265417.7
CDS TCA 90 bp AACTGCAATGGTGCCCTGGGAGGAAGACGTCACGCTCTTGACAAATaGGATTGTGAAGACACCTTTCCCGAGGCCACCCATAACCTGTCT +
Preference number: 5 (lower is better)
Translates to: NCNGALGGRRHALDK*DCEDTFPEATHNLS
Trigger: AGACAGGTTATGGGTGGCCTCGGGAAAGGTGTCTTCACAATCTCATTTGTCAAGAGCGTGACGTCTTCCTCCCAGGGCACCATTGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CCA 90 bp AGGTCCATTGGGAGGCAGTTCTTTAAGGCAACTGCAATGGTGCCCTaGGAGGAAGACGTCACGCTCTTGACAAATGAGATTGTGAAGACA +
Preference number: 5 (lower is better)
Translates to: RSIGRQFFKATAMVP*EEDVTLLTNEIVKT
Trigger: TGTCTTCACAATCTCATTTGTCAAGAGCGTGACGTCTTCCTCCCAGGGCACCATTGCAGTTGCCTTAAAGAACTGCCTCCCAATGGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS GCA 90 bp GGATGCTTAGACATTAGTGCCATGGTCAGTAGGCCTAACCTTCATTaGCCACCCATCCCATTCACTTCCTCTTTTAGGCCAACTCCTCTT +
Preference number: 5 (lower is better)
Translates to: GCLDISAMVSRPNLH*PPIPFTSSFRPTPL
Trigger: AAGAGGAGTTGGCCTAAAAGAGGAAGTGAATGGGATGGGTGGGCAATGAAGGTTAGGCCTACTGACCATGGCACTAATGTCTAAGCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478711.1
CDS TCA 90 bp ATGCTAATAGAAAGATCCTTCAGGTATGTAGGGAGCATCTCATCCTaGGAGGGGCTCTTGATCAAAGCCTTAGCCATCTGGAGCAGACTG +
Preference number: 5 (lower is better)
Translates to: MLIERSFRYVGSISS*EGLLIKALAIWSRL
Trigger: CAGTCTGCTCCAGATGGCTAAGGCTTTGATCAAGAGCCCCTCTCAGGATGAGATGCTCCCTACATACCTGAAGGATCTTTCTATTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265417.7
ENST00000283296.12
ENST00000498632.1
CDS TCA 90 bp CTGCTGGTCCTGAGGTCCATGAGCCTGAGGCTTTCTCTGCCACATTaGAGTATCCACTTTTGTCAAACCTGTTTCATAGATCACTATCAG +
Preference number: 5 (lower is better)
Translates to: LLVLRSMSLRLSLPH*SIHFCQTCFIDHYQ
Trigger: CTGATAGTGATCTATGAAACAGGTTTGACAAAAGTGGATACTTCAATGTGGCAGAGAAAGCCTCAGGCTCATGGACCTCAGGACCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478711.1
CDS GCA 90 bp GTTGTGGATGGTGAGCTTGGACACCGAAGTCATGTTGTTGAAAAGTaGGGTGTAAATCGAGAATCTGCTGCTGTTCTGGATTTCCAACTG +
Preference number: 5 (lower is better)
Translates to: VVDGELGHRSHVVEK*GVNRESAAVLDFQL
Trigger: CAGTTGGAAATCCAGAACAGCAGCAGATTCTCGATTTACACCGCACTTTTCAACAACATGACTTCGGTGTCCAAGCTCACCATCCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS TCA 90 bp ATAGGTTCCATTCCACTCCCTGGTCGAGGTCTTGACTGTCAGTACTaGTTCTGCTCCATCAAGATACCTCCTCGTGGTATAAAATCTTTG +
Preference number: 5 (lower is better)
Translates to: IGSIPLPGRGLDCQY*FCSIKIPPRGIKSL
Trigger: CAAAGATTTTATACCACGAGGAGGTATCTTGATGGAGCAGAATCAGTACTGACAGTCAAGACCTCGACCAGGGAGTGGAATGGAACCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS TCA 90 bp GTTTTCCCCAGGAACCAGATTCAGCTTCATAGATGGGCTCCAGACTaGATTATTAGCAGCATTGGTAAAGTGACAACACACATCAACAGT +
Preference number: 5 (lower is better)
Translates to: VFPRNQIQLHRWAPD*IISSIGKVTTHINS
Trigger: ACTGTTGATGTGTGTTGTCACTTTACCAATGCTGCTAATAATTCAGTCTGGAGCCCATCTATGAAGCTGAATCTGGTTCCTGGGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CCA 90 bp GGAAGAATAAATCACAATAAACATGAGGCACAAAGTGGTTCTCCTTaGGGATTTCATGTCTTCAAGTTTGAGTTGGTTGGCCTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GRINHNKHEAQSGSP*GFHVFKFELVGLSS
Trigger: GCTGGACAGGCCAACCAACTCAAACTTGAAGACATGAAATCCCCAAGGAGAACCACTTTGTGCCTCATGTTTATTGTGATTTATTCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283296.12
CDS TCA 90 bp GCTTCCAAAGGATCAACCATGATGTTCAGCTTTAGAGGCAGCGGGTaGACAATGACGTCTTTGGTTGCAATACTGTATGAATTCTTATAT +
Preference number: 5 (lower is better)
Translates to: ASKGSTMMFSFRGSG*TMTSLVAILYEFLY
Trigger: ATATAAGAATTCATACAGTATTGCAACCAAAGACGTCATTGTTCACCCGCTGCCTCTAAAGCTGAACATCATGGTTGATCCTTTGGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CCA 90 bp ACATTAACCGTAGAGAGCACGTGCGTCATCATTTCTGAATTTACTTaGGTTGGAACTGTTGAGAGCAGATCAAGGATGTTAATAATGGCT +
Preference number: 5 (lower is better)
Translates to: TLTVESTCVIISEFT*VGTVESRSRMLIMA
Trigger: AGCCATTATTAACATCCTTGATCTGCTCTCAACAGTTCCAACCCAAGTAAATTCAGAAATGATGACGCACGTGCTCTCTACGGTTAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265417.7
ENST00000283296.12
ENST00000498632.1
CDS TCA 90 bp TTCATAGATGGGCTCCAGACTGAATTATTAGCAGCATTGGTAAAGTaGCAACACACATCAACAGTTTTTGAACACCAGGAAACTGAGCTT +
Preference number: 5 (lower is better)
Translates to: FIDGLQTELLAALVK*QHTSTVFEHQETEL
Trigger: AAGCTCAGTTTCCTGGTGTTCAAAAACTGTTGATGTGTGTTGTCACTTTACCAATGCTGCTAATAATTCAGTCTGGAGCCCATCTATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CCA 90 bp GGAAGAATAAATCACAATAAACATGAGGCACAAAGTGGTTCTCCTTaGGGATTTCATGTCTTCAAGTTTGAGTTGGTTGGCCTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: GRINHNKHEAQSGSP*GFHVFKFELVGLSL
Trigger: AAGAGAAAGGCCAACCAACTCAAACTTGAAGACATGAAATCCCCAAGGAGAACCACTTTGTGCCTCATGTTTATTGTGATTTATTCTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265417.7
CDS CCA 90 bp TATGCTCAAAATGTCGGTAATTTGGTCAGTGTTATTCCCATGAATTaGAAAACTGAGGCTGTTCAAGTAGGCTTTGATAGGATCCAGGAA +
Preference number: 5 (lower is better)
Translates to: YAQNVGNLVSVIPMN*KTEAVQVGFDRIQE
Trigger: TTCCTGGATCCTATCAAAGCCTACTTGAACAGCCTCAGTTTTCCAATTCATGGGAATAACACTGACCAAATTACCGACATTTTGAGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CCA 72 bp GGAGGGTGGGGTTTCACAAGACCAGACTTCAAATGCTaGGGCTCTTGCGGGTTCCCAGGCTGTCGGGAGCAG +
Preference number: 6 (lower is better)
Translates to: GGWGFTRPDFKC*GSCGFPGCREQ
Trigger: CTGCTCCCGACAGCCTGGGAACCCGCAAGAGCCCCAGCATTTGAAGTCTGGTCTTGTGAAACCCCACCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265417.7
CDS CCA 72 bp ACCAAGCAAGACTCATTTCGCGTTTTCAGGCAGGACTaGCAGCACCGCTCCCACGCTCAGCCTCCCCCAGCT +
Preference number: 6 (lower is better)
Translates to: TKQDSFRVFRQD*QHRSHAQPPPA
Trigger: AGCTGGGGGAGGCTGAGCGTGGGAGCGGTGCTGCCAGTCCTGCCTGAAAACGCGAAATGAGTCTTGCTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283296.12
CDS GCA 72 bp AGAGGAGGGTGGGGTTTCACAAGACCAGACTTCAAATaGTGGGGCTCTTGCGGGTTCCCAGGCTGTCGGGAG +
Preference number: 6 (lower is better)
Translates to: RGGWGFTRPDFK*WGSCGFPGCRE
Trigger: CTCCCGACAGCCTGGGAACCCGCAAGAGCCCCAGCATTTGAAGTCTGGTCTTGTGAAACCCCACCCTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265417.7
CDS CAA 90 bp AGGAGGGTGGGGTTTCACAAGACCAGACTTCAAATGCTGGGGCTCTaGCGGGTTCCCAGGCTGTCGGGAGCAGAGGTGAACTGCCTTCTG +
Preference number: 6 (lower is better)
Translates to: RRVGFHKTRLQMLGL*RVPRLSGAEVNCLL
Trigger: CAGAAGGCAGTTCACCTCTGCTCCCGACAGCCTGGGAACCCGCAAGAGCCCCAGCATTTGAAGTCTGGTCTTGTGAAACCCCACCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265417.7
CDS CAA 72 bp GGGTTTCACAAGACCAGACTTCAAATGCTGGGGCTCTaGCGGGTTCCCAGGCTGTCGGGAGCAGAGGTGAAC +
Preference number: 6 (lower is better)
Translates to: GFHKTRLQMLGL*RVPRLSGAEVN
Trigger: GTTCACCTCTGCTCCCGACAGCCTGGGAACCCGCAAGAGCCCCAGCATTTGAAGTCTGGTCTTGTGAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265417.7
CDS TCA 72 bp TCTTCTCCTCCCACTGGGAGCCTACACATTTGTAAGTaGTGGTCCCGCCAATGGGACTCTCAGGGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: SSPPTGSLHICK*WSRQWDSQGCW
Trigger: CCAGCAGCCCTGAGAGTCCCATTGGCGGGACCATCACTTACAAATGTGTAGGCTCCCAGTGGGAGGAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265417.7
ENST00000283296.12
ENST00000498632.1
CDS CCA 72 bp GGGCTGCTGGGAACGTTTGAGAACCGGCATAGCTTCTaGATGACTTTCCCCGGCTCTCCGACACCTATTACG +
Preference number: 6 (lower is better)
Translates to: GLLGTFENRHSF*MTFPGSPTPIT
Trigger: CGTAATAGGTGTCGGAGAGCCGGGGAAAGTCATCCAGAAGCTATGCCGGTTCTCAAACGTTCCCAGCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265417.7
ENST00000283296.12
ENST00000498632.1
CDS TCA 72 bp GGTGCCCTGGGAGGAAGACGTCACGCTCTTGACAAATaGGATTGTGAAGACACCTTTCCCGAGGCCACCCAT +
Preference number: 6 (lower is better)
Translates to: GALGGRRHALDK*DCEDTFPEATH
Trigger: ATGGGTGGCCTCGGGAAAGGTGTCTTCACAATCTCATTTGTCAAGAGCGTGACGTCTTCCTCCCAGGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CCA 72 bp GAGGGCATCCCATTCAATCACACAGCCAGAGGAGGGTaGGGTTTCACAAGACCAGACTTCAAATGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: EGIPFNHTARGG*GFTRPDFKCWG
Trigger: GCCCCAGCATTTGAAGTCTGGTCTTGTGAAACCCCACCCTCCTCTGGCTGTGTGATTGAATGGGATGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265417.7
CDS CAA 72 bp CCAGACGACCCGCTTGGGCACTGGGTTCCATCAGCCTaGAGGGTGTATCTGCTGCAGCTAGAATCTATGTCT +
Preference number: 6 (lower is better)
Translates to: PDDPLGHWVPSA*RVYLLQLESMS
Trigger: AGACATAGATTCTAGCTGCAGCAGATACACCCTCAAGGCTGATGGAACCCAGTGCCCAAGCGGGTCGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CAA 90 bp ACTGTTGTTCCAGACGACCCGCTTGGGCACTGGGTTCCATCAGCCTaGAGGGTGTATCTGCTGCAGCTAGAATCTATGTCTGTCTCAGGG +
Preference number: 6 (lower is better)
Translates to: TVVPDDPLGHWVPSA*RVYLLQLESMSVSG
Trigger: CCCTGAGACAGACATAGATTCTAGCTGCAGCAGATACACCCTCAAGGCTGATGGAACCCAGTGCCCAAGCGGGTCGTCTGGAACAACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS TCA 72 bp TGCTGGGAACGTTTGAGAACCGGCATAGCTTCTGGATaGCTTTCCCCGGCTCTCCGACACCTATTACGGGAT +
Preference number: 6 (lower is better)
Translates to: CWERLRTGIASG*LSPALRHLLRD
Trigger: ATCCCGTAATAGGTGTCGGAGAGCCGGGGAAAGTCATCCAGAAGCTATGCCGGTTCTCAAACGTTCCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265417.7
ENST00000283296.12
ENST00000498632.1
CDS TCA 72 bp TTACTGCTGATCTGCCCAAAACCCTCTCAGGTGAGGTaGACCTCGAGGGCATCCCATTCAATCACACAGCCA +
Preference number: 6 (lower is better)
Translates to: LLLICPKPSQVR*TSRASHSITQP
Trigger: TGGCTGTGTGATTGAATGGGATGCCCTCGAGGTTCACCTCACCTGAGAGGGTTTTGGGCAGATCAGCAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265417.7
CDS TCA 72 bp AAGTGGTTCTCCTTGGGGATTTCATGTCTTCAAGTTTaGGTTGGTTGGCCTGTCCAGCACTGTGGTCCCCCG +
Preference number: 6 (lower is better)
Translates to: KWFSLGISCLQV*VGWPVQHCGPP
Trigger: CGGGGGACCACAGTGCTGGACAGGCCAACCAACTCAAACTTGAAGACATGAAATCCCCAAGGAGAACCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283296.12
CDS CCA 72 bp ACAAGTGTAGATGACTGTTGTTCCAGACGACCCGCTTaGGCACTGGGTTCCATCAGCCTTGAGGGTGTATCT +
Preference number: 6 (lower is better)
Translates to: TSVDDCCSRRPA*ALGSISLEGVS
Trigger: AGATACACCCTCAAGGCTGATGGAACCCAGTGCCCAAGCGGGTCGTCTGGAACAACAGTCATCTACACTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CAA 72 bp ACTGCAATGGTGCCCTGGGAGGAAGACGTCACGCTCTaGACAAATGAGATTGTGAAGACACCTTTCCCGAGG +
Preference number: 6 (lower is better)
Translates to: TAMVPWEEDVTL*TNEIVKTPFPR
Trigger: CCTCGGGAAAGGTGTCTTCACAATCTCATTTGTCAAGAGCGTGACGTCTTCCTCCCAGGGCACCATTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CAA 90 bp TTTAAGGCAACTGCAATGGTGCCCTGGGAGGAAGACGTCACGCTCTaGACAAATGAGATTGTGAAGACACCTTTCCCGAGGCCACCCATA +
Preference number: 6 (lower is better)
Translates to: FKATAMVPWEEDVTL*TNEIVKTPFPRPPI
Trigger: TATGGGTGGCCTCGGGAAAGGTGTCTTCACAATCTCATTTGTCAAGAGCGTGACGTCTTCCTCCCAGGGCACCATTGCAGTTGCCTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CCA 72 bp GGGAGGCAGTTCTTTAAGGCAACTGCAATGGTGCCCTaGGAGGAAGACGTCACGCTCTTGACAAATGAGATT +
Preference number: 6 (lower is better)
Translates to: GRQFFKATAMVP*EEDVTLLTNEI
Trigger: AATCTCATTTGTCAAGAGCGTGACGTCTTCCTCCCAGGGCACCATTGCAGTTGCCTTAAAGAACTGCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CAA 72 bp CCTGCATCACCTGGAGTGATGTTGTGGATGGTGAGCTaGGACACCGAAGTCATGTTGTTGAAAAGTGCGGTG +
Preference number: 6 (lower is better)
Translates to: PASPGVMLWMVS*DTEVMLLKSAV
Trigger: CACCGCACTTTTCAACAACATGACTTCGGTGTCCAAGCTCACCATCCACAACATCACTCCAGGTGATGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CAA 72 bp AAAGTGGTTCTCCTTGGGGATTTCATGTCTTCAAGTTaGAGTTGGTTGGCCTGTCCAGCACTGTGGTCCCCC +
Preference number: 6 (lower is better)
Translates to: KVVLLGDFMSSS*SWLACPALWSP
Trigger: GGGGGACCACAGTGCTGGACAGGCCAACCAACTCAAACTTGAAGACATGAAATCCCCAAGGAGAACCACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283296.12
CDS TCA 72 bp GAAAGATCCTTCAGGTATGTAGGGAGCATCTCATCCTaGGAGGGGCTCTTGATCAAAGCCTTAGCCATCTGG +
Preference number: 6 (lower is better)
Translates to: ERSFRYVGSISS*EGLLIKALAIW
Trigger: CCAGATGGCTAAGGCTTTGATCAAGAGCCCCTCTCAGGATGAGATGCTCCCTACATACCTGAAGGATCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265417.7
ENST00000283296.12
ENST00000498632.1
CDS GCA 72 bp GACATTAGTGCCATGGTCAGTAGGCCTAACCTTCATTaGCCACCCATCCCATTCACTTCCTCTTTTAGGCCA +
Preference number: 6 (lower is better)
Translates to: DISAMVSRPNLH*PPIPFTSSFRP
Trigger: TGGCCTAAAAGAGGAAGTGAATGGGATGGGTGGGCAATGAAGGTTAGGCCTACTGACCATGGCACTAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478711.1
CDS TCA 72 bp ATTCCACTCCCTGGTCGAGGTCTTGACTGTCAGTACTaGTTCTGCTCCATCAAGATACCTCCTCGTGGTATA +
Preference number: 6 (lower is better)
Translates to: IPLPGRGLDCQY*FCSIKIPPRGI
Trigger: TATACCACGAGGAGGTATCTTGATGGAGCAGAATCAGTACTGACAGTCAAGACCTCGACCAGGGAGTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS TCA 72 bp AGTGATAGGTTCCATTCCACTCCCTGGTCGAGGTCTTaGCTGTCAGTACTGATTCTGCTCCATCAAGATACC +
Preference number: 6 (lower is better)
Translates to: SDRFHSTPWSRS*LSVLILLHQDT
Trigger: GGTATCTTGATGGAGCAGAATCAGTACTGACAGTCAAGACCTCGACCAGGGAGTGGAATGGAACCTATCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CAA 90 bp ATGGCTCCCAGACTCCCAGGAGAAGAGCTGATTTCATGTTCCGCTTaGTCTATGCTAATAGAAAGATCCTTCAGGTATGTAGGGAGCATC +
Preference number: 6 (lower is better)
Translates to: MAPRLPGEELISCSA*SMLIERSFRYVGSI
Trigger: GATGCTCCCTACATACCTGAAGGATCTTTCTATTAGCATAGACAAAGCGGAACATGAAATCAGCTCTTCTCCTGGGAGTCTGGGAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265417.7
ENST00000283296.12
ENST00000498632.1
CDS GCA 72 bp GGTGAGCTTGGACACCGAAGTCATGTTGTTGAAAAGTaGGGTGTAAATCGAGAATCTGCTGCTGTTCTGGAT +
Preference number: 6 (lower is better)
Translates to: GELGHRSHVVEK*GVNRESAAVLD
Trigger: ATCCAGAACAGCAGCAGATTCTCGATTTACACCGCACTTTTCAACAACATGACTTCGGTGTCCAAGCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CAA 72 bp TTGCAAACATATTCACCTGCATCACCTGGAGTGATGTaGTGGATGGTGAGCTTGGACACCGAAGTCATGTTG +
Preference number: 6 (lower is better)
Translates to: LQTYSPASPGVM*WMVSLDTEVML
Trigger: CAACATGACTTCGGTGTCCAAGCTCACCATCCACAACATCACTCCAGGTGATGCAGGTGAATATGTTTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CAA 90 bp AAGTCATCCCATCTTAATATCTTGAACCAGTCCTTGTTGTGTCCATaGATATACCAAGGGAGGAGGACACAGGGAAGAGGACCCAGTAGT +
Preference number: 6 (lower is better)
Translates to: KSSHLNILNQSLLCP*IYQGRRTQGRGPSS
Trigger: ACTACTGGGTCCTCTTCCCTGTGTCCTCCTCCCTTGGTATATCAATGGACACAACAAGGACTGGTTCAAGATATTAAGATGGGATGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478711.1
CDS TCA 72 bp GGATCAACCATGATGTTCAGCTTTAGAGGCAGCGGGTaGACAATGACGTCTTTGGTTGCAATACTGTATGAA +
Preference number: 6 (lower is better)
Translates to: GSTMMFSFRGSG*TMTSLVAILYE
Trigger: TTCATACAGTATTGCAACCAAAGACGTCATTGTTCACCCGCTGCCTCTAAAGCTGAACATCATGGTTGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS TCA 72 bp CTCTATGCAGCACTTGATGTGATGGGAACCACTGCATaGAACAGTAGCTTCCAAAGGATCAACCATGATGTT +
Preference number: 6 (lower is better)
Translates to: LYAALDVMGTTA*NSSFQRINHDV
Trigger: AACATCATGGTTGATCCTTTGGAAGCTACTGTTTCATGCAGTGGTTCCCATCACATCAAGTGCTGCATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CAA 72 bp CATCTTAATATCTTGAACCAGTCCTTGTTGTGTCCATaGATATACCAAGGGAGGAGGACACAGGGAAGAGGA +
Preference number: 6 (lower is better)
Translates to: HLNILNQSLLCP*IYQGRRTQGRG
Trigger: TCCTCTTCCCTGTGTCCTCCTCCCTTGGTATATCAATGGACACAACAAGGACTGGTTCAAGATATTAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478711.1
CDS TCA 72 bp AGGAACCAGATTCAGCTTCATAGATGGGCTCCAGACTaGATTATTAGCAGCATTGGTAAAGTGACAACACAC +
Preference number: 6 (lower is better)
Translates to: RNQIQLHRWAPD*IISSIGKVTTH
Trigger: GTGTGTTGTCACTTTACCAATGCTGCTAATAATTCAGTCTGGAGCCCATCTATGAAGCTGAATCTGGTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CCA 72 bp GTAGAGAGCACGTGCGTCATCATTTCTGAATTTACTTaGGTTGGAACTGTTGAGAGCAGATCAAGGATGTTA +
Preference number: 6 (lower is better)
Translates to: VESTCVIISEFT*VGTVESRSRML
Trigger: TAACATCCTTGATCTGCTCTCAACAGTTCCAACCCAAGTAAATTCAGAAATGATGACGCACGTGCTCTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265417.7
ENST00000283296.12
ENST00000498632.1
CDS CAA 72 bp AAAGTGGTTCTCCTTGGGGATTTCATGTCTTCAAGTTaGAGTTGGTTGGCCTTTCTCTTCTGGAGTTTTCAG +
Preference number: 6 (lower is better)
Translates to: KVVLLGDFMSSS*SWLAFLFWSFQ
Trigger: CTGAAAACTCCAGAAGAGAAAGGCCAACCAACTCAAACTTGAAGACATGAAATCCCCAAGGAGAACCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265417.7
CDS TCA 72 bp TGCTTCCATTCTACTTTGCTCCAATTAACATTACCCTaGCTGCAGCAGTTCAAAGATACAGGATTGTTGTCG +
Preference number: 6 (lower is better)
Translates to: CFHSTLLQLTLP*LQQFKDTGLLS
Trigger: CGACAACAATCCTGTATCTTTGAACTGCTGCAGTCAGGGTAATGTTAATTGGAGCAAAGTAGAATGGAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS TCA 72 bp GGGCTCCAGACTGAATTATTAGCAGCATTGGTAAAGTaGCAACACACATCAACAGTTTTTGAACACCAGGAA +
Preference number: 6 (lower is better)
Translates to: GLQTELLAALVK*QHTSTVFEHQE
Trigger: TTCCTGGTGTTCAAAAACTGTTGATGTGTGTTGTCACTTTACCAATGCTGCTAATAATTCAGTCTGGAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CCA 72 bp AATCACAATAAACATGAGGCACAAAGTGGTTCTCCTTaGGGATTTCATGTCTTCAAGTTTGAGTTGGTTGGC +
Preference number: 6 (lower is better)
Translates to: NHNKHEAQSGSP*GFHVFKFELVG
Trigger: GCCAACCAACTCAAACTTGAAGACATGAAATCCCCAAGGAGAACCACTTTGTGCCTCATGTTTATTGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CAA 72 bp AGACTCCCAGGAGAAGAGCTGATTTCATGTTCCGCTTaGTCTATGCTAATAGAAAGATCCTTCAGGTATGTA +
Preference number: 6 (lower is better)
Translates to: RLPGEELISCSA*SMLIERSFRYV
Trigger: TACATACCTGAAGGATCTTTCTATTAGCATAGACAAAGCGGAACATGAAATCAGCTCTTCTCCTGGGAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265417.7
ENST00000283296.12
ENST00000498632.1
CDS CAA 90 bp TGTTCATTGGCTTTATGTATTAACTCAAGTGATGGTGGTGTAGTCTaGACTTCATATGTCACAACCACACTTCCAGACTTGAACCCTGTC +
Preference number: 6 (lower is better)
Translates to: CSLALCINSSDGGVV*TSYVTTTLPDLNPV
Trigger: GACAGGGTTCAAGTCTGGAAGTGTGGTTGTGACATATGAAGTCAAGACTACACCACCATCACTTGAGTTAATACATAAAGCCAATGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CAA 90 bp AGGTCTGCAGACTGTTGTCACATTTATGCTCAAAATGTCGGTAATTaGGTCAGTGTTATTCCCATGAATTGGAAAACTGAGGCTGTTCAA +
Preference number: 6 (lower is better)
Translates to: RSADCCHIYAQNVGN*VSVIPMNWKTEAVQ
Trigger: TTGAACAGCCTCAGTTTTCCAATTCATGGGAATAACACTGACCAAATTACCGACATTTTGAGCATAAATGTGACAACAGTCTGCAGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CAA 72 bp GCTTTATGTATTAACTCAAGTGATGGTGGTGTAGTCTaGACTTCATATGTCACAACCACACTTCCAGACTTG +
Preference number: 6 (lower is better)
Translates to: ALCINSSDGGVV*TSYVTTTLPDL
Trigger: CAAGTCTGGAAGTGTGGTTGTGACATATGAAGTCAAGACTACACCACCATCACTTGAGTTAATACATAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CAA 72 bp GACTGTTGTCACATTTATGCTCAAAATGTCGGTAATTaGGTCAGTGTTATTCCCATGAATTGGAAAACTGAG +
Preference number: 6 (lower is better)
Translates to: DCCHIYAQNVGN*VSVIPMNWKTE
Trigger: CTCAGTTTTCCAATTCATGGGAATAACACTGACCAAATTACCGACATTTTGAGCATAAATGTGACAACAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265417.7
ENST00000283296.12
CDS CAA 72 bp ATCTGTTGTCACATTTATGCTCAAAATGTCGGTAATTaGGTCAGTGTTATTCCCATGAATTGGAAAACTGAG +
Preference number: 6 (lower is better)
Translates to: ICCHIYAQNVGN*VSVIPMNWKTE
Trigger: CTCAGTTTTCCAATTCATGGGAATAACACTGACCAAATTACCGACATTTTGAGCATAAATGTGACAACAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478711.1