RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRF4 (Homo sapiens)

Ensembl gene IDs: ENSG00000153294

Ensembl transcript IDs: ENST00000283303.3, ENST00000327753.7, ENST00000371220.5

Found 353 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTaGTGGAGGACTGAGCTATGGAGCCACAGAGCAGGCCTCAGGAGT +
Preference number: 1 (lower is better)
Translates to: WIEPSLSKVPRIHAE*WRTELWSHRAGLRS
Trigger: ACTCCTGAGGCCTGCTCTGTGGCTCCATAGCTCAGTCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR GCA 90 bp AGGGCCCTACAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTaGAGATTGACTCTTAATCTAGTCAAGATTGACCAAGAAGCCAGC +
Preference number: 1 (lower is better)
Translates to: RALQPPAGQGDHKMA*RLTLNLVKIDQEAS
Trigger: GCTGGCTTCTTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTGTAGGGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR CCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCGGCCGACCAAGAGCTTaGGAGTCACTCCTGACAAGA +
Preference number: 2 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPGRPRA*ESLLTR
Trigger: TCTTGTCAGGAGTGACTCCCAAGCTCTTGGTCGGCC...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR CCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCCTGGATCTCCCCTCTTaGTCTCAGGACATCCATGAG +
Preference number: 2 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPLDLPS*SQDIHE
Trigger: CTCATGGATGTCCTGAGACCAAGAGGGGAGATCCAG...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR CCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCATGGCCTCTTTCTCCTaGATCTCCCCTCTTGGTCTC +
Preference number: 2 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPMASFS*ISPLGL
Trigger: GAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCAT...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR TCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCTCTTCCAAGGAAGCATaGCCATTCCTCCTCACTCCA +
Preference number: 2 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPSSKEA*PFLLTP
Trigger: TGGAGTGAGGAGGAATGGTCATGCTTCCTTGGAAGA...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR TCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCCTTGGGAGTCACTCCTaGCAAGAAGAGAAAGTCTTC +
Preference number: 2 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPLGSHS*QEEKVF
Trigger: GAAGACTTTCTCTTCTTGTCAGGAGTGACTCCCAAG...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR TCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGTCTTCCAAGGAAGCATaGCCATTCCTCCTCACTCCA +
Preference number: 2 (lower is better)
Translates to: SYGATEQASGVKDDQAQQSSKEA*PFLLTP
Trigger: TGGAGTGAGGAGGAATGGTCATGCTTCCTTGGAAGA...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR GCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGGGTCCATAAATCATaGTCCTTAAAGCCCAGTCAG +
Preference number: 2 (lower is better)
Translates to: SYGATEQASGVKDDQAQQGVHKS*SLKPSQ
Trigger: CTGACTGGGCTTTAAGGAGCATGATTTATGGACCCC...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR CCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGACTGGATCTCCCCTCTTaGTCTCAGGACATCCATGAG +
Preference number: 2 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGLDLPS*SQDIHE
Trigger: CTCATGGATGTCCTGAGACCAAGAGGGGAGATCCAG...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR CCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAATGGCCTCTTTCTCCTaGATCTCCCCTCTTGGTCTC +
Preference number: 2 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGMASFS*ISPLGL
Trigger: GAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCAT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR TCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGATCTTCCAAGGAAGCATaGCCATTCCTCCTCACTCCA +
Preference number: 2 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGSSKEA*PFLLTP
Trigger: TGGAGTGAGGAGGAATGGTCATGCTTCCTTGGAAGA...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR CCA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATGGCCGACCAAGAGCTTaGGAGTCACTCCTGACAAGA +
Preference number: 2 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNGRPRA*ESLLTR
Trigger: TCTTGTCAGGAGTGACTCCCAAGCTCTTGGTCGGCC...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR CCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCCCAGCCTGCTTTCCATaGCCTCTTTCTCCTGGATCT +
Preference number: 2 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRPACFP*PLSPGS
Trigger: AGATCCAGGAGAAAGAGGCCATGGAAAGCAGGCTGG...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR TCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGCTTGGGAGTCACTCCTaGCAAGAAGAGAAAGTCTTC +
Preference number: 2 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMELGSHS*QEEKVF
Trigger: GAAGACTTTCTCTTCTTGTCAGGAGTGACTCCCAAG...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR CAA 90 bp CTACAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATaGACTCTTAATCTAGTCAAGATTGACCAAGAAGCCAGCCTCTTG +
Preference number: 2 (lower is better)
Translates to: LQPPAGQGDHKMACR*TLNLVKIDQEASLL
Trigger: CAAGAGGCTGGCTTCTTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR GCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCGGGGTCCATAAATCATaGTCCTTAAAGCCCAGTCAG +
Preference number: 2 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRGVHKS*SLKPSQ
Trigger: CTGACTGGGCTTTAAGGAGCATGATTTATGGACCCC...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR CCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTCCAGCCTGCTTTCCATaGCCTCTTTCTCCTGGATCT +
Preference number: 2 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTPACFP*PLSPGS
Trigger: AGATCCAGGAGAAAGAGGCCATGGAAAGCAGGCTGG...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR CCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAACTGGATCTCCCCTCTTaGTCTCAGGACATCCATGAG +
Preference number: 2 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQLDLPS*SQDIHE
Trigger: CTCATGGATGTCCTGAGACCAAGAGGGGAGATCCAG...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR CAA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGCGGCCGACCAAGAGCTaGGGAGTCACTCCTGACAAG +
Preference number: 3 (lower is better)
Translates to: SYGATEQASGVKDDQAQQRPTKS*GVTPDK
Trigger: CTTGTCAGGAGTGACTCCCAAGCTCTTGGTCGGCCG...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR CAA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGACGGCCGACCAAGAGCTaGGGAGTCACTCCTGACAAG +
Preference number: 3 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGRPTKS*GVTPDK
Trigger: CTTGTCAGGAGTGACTCCCAAGCTCTTGGTCGGCCG...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR-3UTR CAA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCAAGAAGCCAGCCTCTaGCAGGGCACGGGTAGGTTA +
Preference number: 3 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNQEASL*QGTGRL
Trigger: TAACCTACCCGTGCCCTGCAAGAGGCTGGCTTCTTG...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
3UTR GCA 72 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTaGAGATTGACTCTTAATCTAGTCAAGATTGACCAA +
Preference number: 3 (lower is better)
Translates to: QPPAGQGDHKMA*RLTLNLVKIDQ
Trigger: TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCACTCATTCTTCCTCCTaGCAACCCACACTCCCACTC +
Preference number: 4 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPTHSSS*QPTLPL
Trigger: GAGTGGGAGTGTGGGTTGGCAGGAGGAAGAATGAGT...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCCCAGCCTGCTTTCCATaGCCTCTTTCTCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPPACFP*PLSPGS
Trigger: AGATCCAGGAGAAAGAGGCCATGGAAAGCAGGCTGG...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGGCCCAGTGAGAACTaGCTGCCTGTTGCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQGPSEN*LPVARS
Trigger: GCTTCTCGCAACAGGCAGTCAGTTCTCACTGGGCCC...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS-3UTR TCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCAGGGCCTCTGAGTGTTaGCAGCAACAACCAAAACCA +
Preference number: 4 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPRASEC*QQQPKP
Trigger: TGGTTTTGGTTGTTGCTGTCAACACTCAGAGGCCCT...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCGATAGCCCCCAAGGTTaGGAAAGCTATGCTAATGGC +
Preference number: 4 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPDSPQG*ESYANG
Trigger: GCCATTAGCATAGCTTTCCCAACCTTGGGGGCTATC...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCAATGAAAGCCCAGTTTaGAATGGCTGCTGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPNESPV*NGCCVE
Trigger: CTCGACACAGCAGCCATTTCAAACTGGGCTTTCATT...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCCAATGGCAAAGCCAATaGCCATCATTCGGGACTTCA +
Preference number: 4 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPQWQSQ*PSFGTS
Trigger: TGAAGTCCCGAATGATGGTCATTGGCTTTGCCATTG...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCGGAAGACTCACATTTTaGAAGTGGGCTTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPGRLTF*KWASLR
Trigger: CCTGAGAGAAGCCCACTTGCAAAATGTGAGTCTTCC...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCGGGGTCCATAAATCATaGTCCTTAAAGCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPGVHKS*SLKPSQ
Trigger: CTGACTGGGCTTTAAGGAGCATGATTTATGGACCCC...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCATGCAGAGGTATAGATaGTGCTGCTACAGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPMQRYR*CCYRKA
Trigger: CGCCTTTCTGTAGCAGCACCATCTATACCTCTGCAT...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCAAGCCCAGTTTGAAATaGCTGCTGTGTCGAGGATGT +
Preference number: 4 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPKPSLK*LLCRGC
Trigger: ACATCCTCGACACAGCAGCCATTTCAAACTGGGCTT...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAGGGCCCAGTGAGAACTaGCTGCCTGTTGCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGGPSEN*LPVARS
Trigger: GCTTCTCGCAACAGGCAGTCAGTTCTCACTGGGCCC...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS-3UTR TCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAGTCCAAGGGGCCCAGTaGGAACTGACTGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGVQGAQ*ELTACC
Trigger: GCAACAGGCAGTCAGTTCTCACTGGGCCCCTTGGAC...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS-3UTR TCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCAATCCTATTTCTCCATaGAAGTCCTTAGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPNPISP*KSLAQG
Trigger: GCCCTGTGCTAAGGACTTTCATGGAGAAATAGGATT...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCGCGAGATGCACCAGTTaGGTCCTTAAAGAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPARCTS*VLKEFF
Trigger: GAAAAACTCTTTAAGGACTCAACTGGTGCATCTCGC...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCTTCTTACGGATTCCTTaGGCTACACTCTCAATGGTC +
Preference number: 4 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPFLRIP*ATLSMV
Trigger: GACCATTGAGAGTGTAGCTCAAGGAATCCGTAAGAA...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCGGCAAACAAATTCACTaGCTGCAACAAATCCGAGCT +
Preference number: 4 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPGKQIH*LQQIRA
Trigger: AGCTCGGATTTGTTGCAGTCAGTGAATTTGTTTGCC...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGCTAGCAGCCCAGAGGTaGAGAATCACCCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQLAAQR*RITQQE
Trigger: TTCCTGCTGGGTGATTCTCCACCTCTGGGCTGCTAG...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283303.3
CDS-3UTR TCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGATTTACAGCCACAATaGCGAACGCCGGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQDLQPQ*RTPGWQ
Trigger: TTGCCATCCCGGCGTTCGTCATTGTGGCTGTAAATC...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAACCTCCCACGGTCCCTaGTCAGTGGCTGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGTSHGP*SVAVIC
Trigger: ACAGATCACAGCCACTGACCAGGGACCGTGGGAGGT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS-3UTR CCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCCTAAGCAGCAAATCATaGTTGCCTGGGACTTCATTT +
Preference number: 4 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPLSSKS*LPGTSF
Trigger: AAATGAAGTCCCAGGCAACCATGATTTGCTGCTTAG...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS-3UTR CCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGCTGGATCTCCCCTCTTaGTCTCAGGACATCCATGAG +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQLDLPS*SQDIHE
Trigger: CTCATGGATGTCCTGAGACCAAGAGGGGAGATCCAG...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGCCAGCCTGCTTTCCATaGCCTCTTTCTCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQPACFP*PLSPGS
Trigger: AGATCCAGGAGAAAGAGGCCATGGAAAGCAGGCTGG...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCCTGAGGTATTATGGTTaGTGTGAAACCCTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPLRYYG*CETLLS
Trigger: AGACAAAAGGGTTTCACATCAACCATAATACCTCAG...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGCACGTGACGCATGTATaGTATCTCCGTCACAACCAC +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQHVTHV*YLRHNH
Trigger: GTGGTTGTGACGGAGATATCATACATGCGTCACGTG...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCGCCTTAATGTTAAAGTaGGAGCCTATGATAAACCAC +
Preference number: 4 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPALMLK*EPMINH
Trigger: GTGGTTTATCATAGGCTCTCACTTTAACATTAAGGC...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCAGAGTGATGGAGGACTaGGCTATGGAGCCACAGAGC +
Preference number: 4 (lower is better)
Translates to: LLSMASFSWISPLGLRTSRVMED*AMEPQS
Trigger: GCTCTGTGGCTCCATAGCTCAGTCCTCCATCACTCT...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAAGAGTGATGGAGGACTaGGCTATGGAGCCACAGAGC +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGRVMED*AMEPQS
Trigger: GCTCTGTGGCTCCATAGCTCAGTCCTCCATCACTCT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAAGGATCCACGCAGAGTaGTGGAGGACTGAGCTATGG +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGRIHAE*WRTELW
Trigger: CCATAGCTCAGTCCTCCATCACTCTGCGTGGATCCT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGCTAATGGCTTGGGATaGATTTGGCCACAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQANGLG*IWPQLP
Trigger: AGGAAGCTGTGGCCAAATGCATCCCAAGCCATTAGC...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGAGAGGCCTGTTGAGGTaGATGGGTTGTATACAGCTG +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQRGLLR*MGCIQL
Trigger: CAGCTGTATACAACCCATGCACCTCAACAGGCCTCT...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371220.5
CDS-3UTR CCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGTGCCAGCCAACACACTaGGCTCTGGCATTGCGGGTT +
Preference number: 4 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMECQPTH*ALALRV
Trigger: AACCCGCAATGCCAGAGCCCAGTGTGTTGGCTGGCA...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCGGCCGACCAAGAGCTTaGGAGTCACTCCTGACAAGA +
Preference number: 4 (lower is better)
Translates to: LLSMASFSWISPLGLRTSGRPRA*ESLLTR
Trigger: TCTTGTCAGGAGTGACTCCCAAGCTCTTGGTCGGCC...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCCTCAGCTCCCTAGCATaGTGCCTCACCATCACGTGG +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRLSSLA*CLTITW
Trigger: CCACGTGATGGTGAGGCATCATGCTAGGGAGCTGAG...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283303.3
CDS-3UTR TCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGTTCACGATGCACACGTaGCGCATGTATGATATCTCC +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQFTMHT*RMYDIS
Trigger: GGAGATATCATACATGCGTCACGTGTGCATCGTGAA...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CCTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCCAATAGAGGGCCTCTaGGTGTTGACAGCAACAACC +
Preference number: 4 (lower is better)
Translates to: PAFHGLFLLDLPSWSQDIPIEGL*VLTATT
Trigger: GGTTGTTGCTGTCAACACTCAGAGGCCCTCTATTGG...GATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGCGATTTCCCCTTCAGTaGAGACATCCTCATCCTCAA +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQRFPLQ*RHPHPQ
Trigger: TTGAGGATGAGGATGTCTTCACTGAAGGGGAAATCG...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGCTTGGGAGTCACTCCTaGCAAGAAGAGAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQLGSHS*QEEKVF
Trigger: GAAGACTTTCTCTTCTTGTCAGGAGTGACTCCCAAG...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGCAGAGGTATAGATGGTaGTGCTACAGAAAGGCGAGA +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQQRYRW*CYRKAR
Trigger: TCTCGCCTTTCTGTAGCAGCACCATCTATACCTCTG...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGAAGACTCACATTTTaGAAGTGGGCTTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQGRLTF*KWASLR
Trigger: CCTGAGAGAAGCCCACTTGCAAAATGTGAGTCTTCC...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCCTCCTTTTCTTGGAGTaGCAGCCAACACACTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLSMASFSWISPLGLRTSLLFLE*QPTHWA
Trigger: AGCCCAGTGTGTTGGCTGGCACTCCAAGAAAAGGAG...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAACTCATTCTTCCTCCTaGCAACCCACACTCCCACTC +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGTHSSS*QPTLPL
Trigger: GAGTGGGAGTGTGGGTTGGCAGGAGGAAGAATGAGT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATACCTCCCACGGTCCCTaGTCAGTGGCTGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNTSHGP*SVAVIC
Trigger: ACAGATCACAGCCACTGACCAGGGACCGTGGGAGGT...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS-3UTR CCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTTGCCTCACCATCACGTaGCACCTCCCACGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTCLTIT*HLPRSL
Trigger: CAGGGACCGTGGGAGGTGCCACGTGATGGTGAGGCA...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283303.3
CDS-3UTR CCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGATGCAGAGGTATAGATaGTGCTGCTACAGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQMQRYR*CCYRKA
Trigger: CGCCTTTCTGTAGCAGCACCATCTATACCTCTGCAT...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGTGTCGAGGATGTGGTTaGCCACTTCACTATAGCTCT +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQCRGCG*PLHYSS
Trigger: AGAGCTATAGTGAAGTGGCCAACCACATCCTCGACA...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CCTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCTGGATCTCCCCTCTTaGTCTCAGGACATCCATGAG +
Preference number: 4 (lower is better)
Translates to: PAFHGLFLLDLPSWSQDILDLPS*SQDIHE
Trigger: CTCATGGATGTCCTGAGACCAAGAGGGGAGATCCAG...GATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGATTTACAGCCACAATaGCGAACGCCGGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMEDLQPQ*RTPGWQ
Trigger: TTGCCATCCCGGCGTTCGTCATTGTGGCTGTAAATC...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAGTCTCAGGACATCCATaGGAAATGGGGCAGCATTTC +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGVSGHP*EMGQHF
Trigger: GAAATGCTGCCCCATTTCTCATGGATGTCCTGAGAC...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CCTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCTCTTCCAAGGAAGCATaGCCATTCCTCCTCACTCCA +
Preference number: 4 (lower is better)
Translates to: PAFHGLFLLDLPSWSQDISSKEA*PFLLTP
Trigger: TGGAGTGAGGAGGAATGGTCATGCTTCCTTGGAAGA...GATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGCTGCTATATTCACGATaGACACGTGACGCATGTATG +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQLLYSR*TRDACM
Trigger: CATACATGCGTCACGTGTGCATCGTGAATATAGCAG...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGACTCATTCTTCCTCCTaGCAACCCACACTCCCACTC +
Preference number: 4 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMETHSSS*QPTLPL
Trigger: GAGTGGGAGTGTGGGTTGGCAGGAGGAAGAATGAGT...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAGGATCCTTCCAGTCTTaGGTTTCCCTTCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGGSFQS*VSLQGF
Trigger: AAAGCCCTGAAGGGAAACCCAAGACTGGAAGGATCC...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CCTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCGGATCCTTCCAGTCTTaGGTTTCCCTTCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: PAFHGLFLLDLPSWSQDIGSFQS*VSLQGF
Trigger: AAAGCCCTGAAGGGAAACCCAAGACTGGAAGGATCC...GATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CCTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCTCCTTAGCACAGGGCTaGCTGCAGTTGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PAFHGLFLLDLPSWSQDISLAQG*LQLEEE
Trigger: TTCTTCTTCCAACTGCAGCCAGCCCTGTGCTAAGGA...GATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCTCCTTAGCACAGGGCTaGCTGCAGTTGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LLSMASFSWISPLGLRTSSLAQG*LQLEEE
Trigger: TTCTTCTTCCAACTGCAGCCAGCCCTGTGCTAAGGA...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGTCCTTAGCTCTTGCCTaGGAATCTGTACCATTCCTA +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQSLALA*ESVPFL
Trigger: TAGGAATGGTACAGATTCCCAGGCAAGAGCTAAGGA...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCGATAGCCCCCAAGGTTaGGAAAGCTATGCTAATGGC +
Preference number: 4 (lower is better)
Translates to: LLSMASFSWISPLGLRTSDSPQG*ESYANG
Trigger: GCCATTAGCATAGCTTTCCCAACCTTGGGGGCTATC...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGACATCCATGAGAAATaGGGCAGCATTTCATCCTTG +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQDIHEK*GSISSL
Trigger: CAAGGATGAAATGCTGCCCCATTTCTCATGGATGTC...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCGGCCGACCAAGAGCTTaGGAGTCACTCCTGACAAGA +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRGRPRA*ESLLTR
Trigger: TCTTGTCAGGAGTGACTCCCAAGCTCTTGGTCGGCC...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGCCCAGATGAGAGGTaGAGGACCTTACAGGGACCA +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRSPDER*RTLQGP
Trigger: TGGTCCCTGTAAGGTCCTCCACCTCTCATCTGGGCT...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371220.5
CDS-3UTR TCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAACACTGTGGCTTCAATaGTCAGGCAAAGAACCAAGC +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGTLWLQ*SGKEPS
Trigger: GCTTGGTTCTTTGCCTGATCATTGAAGCCACAGTGT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGCACGTGACGCATGTATaGTATCTCCGTCACAACCAC +
Preference number: 4 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMEHVTHV*YLRHNH
Trigger: GTGGTTGTGACGGAGATATCATACATGCGTCACGTG...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGTAGAAAAAGTGGCTaGAAAATGTCACTGCAACAC +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQGRKSG*KMSLQH
Trigger: GTGTTGCAGTGACATTTTTCAGCCACTTTTTCTACC...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCCCAATAGAGGGCCTCTaGGTGTTGACAGCAACAACC +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRPIEGL*VLTATT
Trigger: GGTTGTTGCTGTCAACACTCAGAGGCCCTCTATTGG...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGACGATTTCCCCTTCAGTaGAGACATCCTCATCCTCAA +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGRFPLQ*RHPHPQ
Trigger: TTGAGGATGAGGATGTCTTCACTGAAGGGGAAATCG...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CCTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCGATTTCCCCTTCAGTaGAGACATCCTCATCCTCAA +
Preference number: 4 (lower is better)
Translates to: PAFHGLFLLDLPSWSQDIRFPLQ*RHPHPQ
Trigger: TTGAGGATGAGGATGTCTTCACTGAAGGGGAAATCG...GATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCCCAGTGAGAACTGACTaGCTGTTGCGAGAAGCCGAT +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRPVRTD*LLREAD
Trigger: ATCGGCTTCTCGCAACAGGCAGTCAGTTCTCACTGG...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS-3UTR GCA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCCAGTGAGAACTGACTaGCTGTTGCGAGAAGCCGAT +
Preference number: 4 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNPVRTD*LLREAD
Trigger: ATCGGCTTCTCGCAACAGGCAGTCAGTTCTCACTGG...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS-3UTR GCA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTCCTTTTCTTGGAGTaGCAGCCAACACACTGGGCT +
Preference number: 4 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNLLFLE*QPTHWA
Trigger: AGCCCAGTGTGTTGGCTGGCACTCCAAGAAAAGGAG...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp CCTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCGGGGTCCATAAATCATaGTCCTTAAAGCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PAFHGLFLLDLPSWSQDIGVHKS*SLKPSQ
Trigger: CTGACTGGGCTTTAAGGAGCATGATTTATGGACCCC...GATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCTCTCCATTTTTGAAATaGGAGTCCAAGGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: LLSMASFSWISPLGLRTSSPFLK*ESKGPS
Trigger: ACTGGGCCCCTTGGACTCCCATTTCAAAAATGGAGA...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS-3UTR CCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGACCTTCGCATTTCTCTTaGATCCTTCCAGTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGPSHFS*ILPVLG
Trigger: ACCCAAGACTGGAAGGATCCAAGAGAAATGCGAAGG...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGTCCTTAGCACAGGGCTaGCTGCAGTTGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMESLAQG*LQLEEE
Trigger: TTCTTCTTCCAACTGCAGCCAGCCCTGTGCTAAGGA...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAATGCAGAGGTATAGATaGTGCTGCTACAGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGMQRYR*CCYRKA
Trigger: CGCCTTTCTGTAGCAGCACCATCTATACCTCTGCAT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCGAGCTACACTCTCAATaGTCTCTGGAGCTCGAAAGT +
Preference number: 4 (lower is better)
Translates to: LLSMASFSWISPLGLRTSELHSQ*SLELES
Trigger: ACTTTCGAGCTCCAGAGACCATTGAGAGTGTAGCTC...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCTGTCGAGGATGTGGTTaGCCACTTCACTATAGCTCT +
Preference number: 4 (lower is better)
Translates to: LLSMASFSWISPLGLRTSCRGCG*PLHYSS
Trigger: AGAGCTATAGTGAAGTGGCCAACCACATCCTCGACA...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCAAGCCCAGTTTGAAATaGCTGCTGTGTCGAGGATGT +
Preference number: 4 (lower is better)
Translates to: LLSMASFSWISPLGLRTSKPSLK*LLCRGC
Trigger: ACATCCTCGACACAGCAGCCATTTCAAACTGGGCTT...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTTGCCAGCCAACACACTaGGCTCTGGCATTGCGGGTT +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTCQPTH*ALALRV
Trigger: AACCCGCAATGCCAGAGCCCAGTGTGTTGGCTGGCA...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATATGGCCTCTTTCTCCTaGATCTCCCCTCTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNMASFS*ISPLGL
Trigger: GAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCAT...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCCAGCCTGCTTTCCATaGCCTCTTTCTCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNPACFP*PLSPGS
Trigger: AGATCCAGGAGAAAGAGGCCATGGAAAGCAGGCTGG...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CCTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCTTCTTACGGATTCCTTaGGCTACACTCTCAATGGTC +
Preference number: 4 (lower is better)
Translates to: PAFHGLFLLDLPSWSQDIFLRIP*ATLSMV
Trigger: GACCATTGAGAGTGTAGCTCAAGGAATCCGTAAGAA...GATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGATTTCACTTCGTTCCTaGTATCCAACATCATTTGGC +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQISLRS*YPTSFG
Trigger: GCCAAATGATGTTGGATATCAGGAACGAAGTGAAAT...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGACACTGTGGCTTCAATaGTCAGGCAAAGAACCAAGC +
Preference number: 4 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMETLWLQ*SGKEPS
Trigger: GCTTGGTTCTTTGCCTGATCATTGAAGCCACAGTGT...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAAGGAAGTGCCTTCTATaGGAGTGGCTATTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGRKCLL*EWLFQN
Trigger: GTTTTGGAATAGCCACTCTCATAGAAGGCACTTCCT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCGTCTCAGGACATCCATaGGAAATGGGGCAGCATTTC +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRVSGHP*EMGQHF
Trigger: GAAATGCTGCCCCATTTCTCATGGATGTCCTGAGAC...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTAGAGTGATGGAGGACTaGGCTATGGAGCCACAGAGC +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTRVMED*AMEPQS
Trigger: GCTCTGTGGCTCCATAGCTCAGTCCTCCATCACTCT...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTAGGATCCACGCAGAGTaGTGGAGGACTGAGCTATGG +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTRIHAE*WRTELW
Trigger: CCATAGCTCAGTCCTCCATCACTCTGCGTGGATCCT...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCCCTGGTATTCATCGCTaGGAACAATACCAAACCTAC +
Preference number: 4 (lower is better)
Translates to: LLSMASFSWISPLGLRTSPGIHR*EQYQTY
Trigger: GTAGGTTTGGTATTGTTCTCAGCGATGAATACCAGG...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371220.5
CDS-3UTR GCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGAGGTATAGATGGTGCTaGTACAGAAAGGCGAGATGC +
Preference number: 4 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMERYRWC*YRKARC
Trigger: GCATCTCGCCTTTCTGTAGCAGCACCATCTATACCT...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGCGAAAGTCTAGAATATaGAGAGGTATAGATGGTGCT +
Preference number: 4 (lower is better)
Translates to: SYGATEQASGVKDDQAQQRKSRI*RGIDGA
Trigger: AGCACCATCTATACCTCTGCATATTCTAGACTTTCG...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATGCTAATGGCTTGGGATaGATTTGGCCACAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNANGLG*IWPQLP
Trigger: AGGAAGCTGTGGCCAAATGCATCCCAAGCCATTAGC...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGACTGCTATATTCACGATaGACACGTGACGCATGTATG +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGLLYSR*TRDACM
Trigger: CATACATGCGTCACGTGTGCATCGTGAATATAGCAG...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCAGTCAGAAGGGACACTaGTATATTCACGATGCACAC +
Preference number: 4 (lower is better)
Translates to: LLSMASFSWISPLGLRTSSQKGH*YIHDAH
Trigger: GTGTGCATCGTGAATATAGCAGTGTCCCTTCTGACT...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGCCTTCGCATTTCTCTTaGATCCTTCCAGTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMEPSHFS*ILPVLG
Trigger: ACCCAAGACTGGAAGGATCCAAGAGAAATGCGAAGG...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGAGGGCTGGCTGCAGTTaGAAGAAGAAATACAAGGTC +
Preference number: 4 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMERAGCS*KKKYKV
Trigger: GACCTTGTATTTCTTCTTCCAACTGCAGCCAGCCCT...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CCTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCTCCTTAGCTCTTGCCTaGGAATCTGTACCATTCCTA +
Preference number: 4 (lower is better)
Translates to: PAFHGLFLLDLPSWSQDISLALA*ESVPFL
Trigger: TAGGAATGGTACAGATTCCCAGGCAAGAGCTAAGGA...GATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAAAGACATCACCACACTaGTGTAGTTACAGCGGCATT +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGKTSPH*CSYSGI
Trigger: AATGCCGCTGTAACTACACCAGTGTGGTGATGTCTT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCGACATCCATGAGAAATaGGGCAGCATTTCATCCTTG +
Preference number: 4 (lower is better)
Translates to: LLSMASFSWISPLGLRTSDIHEK*GSISSL
Trigger: CAAGGATGAAATGCTGCCCCATTTCTCATGGATGTC...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCTGTCTTCTCCATTTTTaGAATGGGAGTCCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRCLLHF*NGSPRG
Trigger: GCCCCTTGGACTCCCATTTCAAAAATGGAGAAGACA...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS-3UTR TCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAATTTCACCATGTCAGTaGTGCAGGCATAATCAAAGG +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGISPCQ*CRHNQR
Trigger: CCTTTGATTATGCCTGCATCACTGACATGGTGAAAT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAATGAAAGCCCAGTTTaGAATGGCTGCTGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRNESPV*NGCCVE
Trigger: CTCGACACAGCAGCCATTTCAAACTGGGCTTTCATT...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGGCAAACAAATTCACTaGCTGCAACAAATCCGAGCT +
Preference number: 4 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMEGKQIH*LQQIRA
Trigger: AGCTCGGATTTGTTGCAGTCAGTGAATTTGTTTGCC...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCCAATGGCAAAGCCAATaGCCATCATTCGGGACTTCA +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRQWQSQ*PSFGTS
Trigger: TGAAGTCCCGAATGATGGTCATTGGCTTTGCCATTG...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTGATTTACAGCCACAATaGCGAACGCCGGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTDLQPQ*RTPGWQ
Trigger: TTGCCATCCCGGCGTTCGTCATTGTGGCTGTAAATC...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAATTATGACCACATCCTaGGACTTGGAACTGCCAATA +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGIMTTS*DLELPI
Trigger: TATTGGCAGTTCCAAGTCTCAGGATGTGGTCATAAT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGGTATAGATGGTGCTaGTACAGAAAGGCGAGATGC +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRRYRWC*YRKARC
Trigger: GCATCTCGCCTTTCTGTAGCAGCACCATCTATACCT...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAAACAAATTCACTGACTaGAACAAATCCGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGNKFTD*NKSELA
Trigger: TGCCAGCTCGGATTTGTTGCAGTCAGTGAATTTGTT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCGGAAGACTCACATTTTaGAAGTGGGCTTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRGRLTF*KWASLR
Trigger: CCTGAGAGAAGCCCACTTGCAAAATGTGAGTCTTCC...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTCTCCTTTTCTTGGAGTaGCAGCCAACACACTGGGCT +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTLLFLE*QPTHWA
Trigger: AGCCCAGTGTGTTGGCTGGCACTCCAAGAAAAGGAG...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCCTTCGCATTTCTCTTaGATCCTTCCAGTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNPSHFS*ILPVLG
Trigger: ACCCAAGACTGGAAGGATCCAAGAGAAATGCGAAGG...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGGGCTGGCTGCAGTTaGAAGAAGAAATACAAGGTC +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRRAGCS*KKKYKV
Trigger: GACCTTGTATTTCTTCTTCCAACTGCAGCCAGCCCT...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCGGATGTGGAGTTGTCTaGCAAACAAATTCACTGACT +
Preference number: 4 (lower is better)
Translates to: LLSMASFSWISPLGLRTSGCGVV*QTNSLT
Trigger: AGTCAGTGAATTTGTTTGCCAGACAACTCCACATCC...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGCATGTAGCCTTTCTCTaGCTCTGTGATAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMEHVAFL*LCDSNC
Trigger: ACAGTTGCTATCACAGAGCCAGAGAAAGGCTACATG...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTATGGCCTCTTTCTCCTaGATCTCCCCTCTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTMASFS*ISPLGL
Trigger: GAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCAT...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAATCCTATTTCTCCATaGAAGTCCTTAGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRNPISP*KSLAQG
Trigger: GCCCTGTGCTAAGGACTTTCATGGAGAAATAGGATT...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCGCGAGATGCACCAGTTaGGTCCTTAAAGAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRARCTS*VLKEFF
Trigger: GAAAAACTCTTTAAGGACTCAACTGGTGCATCTCGC...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCGGCAAACAAATTCACTaGCTGCAACAAATCCGAGCT +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRGKQIH*LQQIRA
Trigger: AGCTCGGATTTGTTGCAGTCAGTGAATTTGTTTGCC...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAATTGAGGCTTTTCTCTaGGGTATTATGGTTGATGTG +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGIEAFL*GIMVDV
Trigger: CACATCAACCATAATACCTCAGAGAAAAGCCTCAAT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CCTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCATTGAGGCTTTTCTCTaGGGTATTATGGTTGATGTG +
Preference number: 4 (lower is better)
Translates to: PAFHGLFLLDLPSWSQDIIEAFL*GIMVDV
Trigger: CACATCAACCATAATACCTCAGAGAAAAGCCTCAAT...GATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTCACGTGACGCATGTATaGTATCTCCGTCACAACCAC +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTHVTHV*YLRHNH
Trigger: GTGGTTGTGACGGAGATATCATACATGCGTCACGTG...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCGCCTTAATGTTAAAGTaGGAGCCTATGATAAACCAC +
Preference number: 4 (lower is better)
Translates to: LLSMASFSWISPLGLRTSALMLK*EPMINH
Trigger: GTGGTTTATCATAGGCTCTCACTTTAACATTAAGGC...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGGTAGAAAAAGTGGCTaGAAAATGTCACTGCAACAC +
Preference number: 4 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMEGRKSG*KMSLQH
Trigger: GTGTTGCAGTGACATTTTTCAGCCACTTTTTCTACC...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTAGGGCCTCTGAGTGTTaGCAGCAACAACCAAAACCA +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTRASEC*QQQPKP
Trigger: TGGTTTTGGTTGTTGCTGTCAACACTCAGAGGCCCT...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGATTATGACCACATCCTaGGACTTGGAACTGCCAATA +
Preference number: 4 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMEIMTTS*DLELPI
Trigger: TATTGGCAGTTCCAAGTCTCAGGATGTGGTCATAAT...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTTCTTCCAAGGAAGCATaGCCATTCCTCCTCACTCCA +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTSSKEA*PFLLTP
Trigger: TGGAGTGAGGAGGAATGGTCATGCTTCCTTGGAAGA...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGACGAAAGTCTAGAATATaGAGAGGTATAGATGGTGCT +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGRKSRI*RGIDGA
Trigger: AGCACCATCTATACCTCTGCATATTCTAGACTTTCG...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGTCAGAAGGGACACTaGTATATTCACGATGCACAC +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRSQKGH*YIHDAH
Trigger: GTGTGCATCGTGAATATAGCAGTGTCCCTTCTGACT...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTGGATCCTTCCAGTCTTaGGTTTCCCTTCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTGSFQS*VSLQGF
Trigger: AAAGCCCTGAAGGGAAACCCAAGACTGGAAGGATCC...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGGATGTGGAGTTGTCTaGCAAACAAATTCACTGACT +
Preference number: 4 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMEGCGVV*QTNSLT
Trigger: AGTCAGTGAATTTGTTTGCCAGACAACTCCACATCC...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAATATCCAACATCATTTaGCACGCTTTCTCATCCCAT +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGISNII*HAFSSH
Trigger: ATGGGATGAGAAAGCGTGCCAAATGATGTTGGATAT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAAGACATCACCACACTaGTGTAGTTACAGCGGCATT +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRKTSPH*CSYSGI
Trigger: AATGCCGCTGTAACTACACCAGTGTGGTGATGTCTT...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCATGTAGCCTTTCTCTaGCTCTGTGATAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNHVAFL*LCDSNC
Trigger: ACAGTTGCTATCACAGAGCCAGAGAAAGGCTACATG...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATGACATCCATGAGAAATaGGGCAGCATTTCATCCTTG +
Preference number: 4 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNDIHEK*GSISSL
Trigger: CAAGGATGAAATGCTGCCCCATTTCTCATGGATGTC...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAGTCCAAGGGGCCCAGTaGGAACTGACTGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQVQGAQ*ELTACC
Trigger: GCAACAGGCAGTCAGTTCTCACTGGGCCCCTTGGAC...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS-3UTR TCA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTTCATTTTCATACATaGGGATCTTCACGGCATCCA +
Preference number: 4 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNLHFHT*GSSRHP
Trigger: TGGATGCCGTGAAGATCCTCATGTATGAAAATGAAG...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000283303.3
CDS-3UTR TCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGCTGAGGTATTATGGTTaGTGTGAAACCCTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMELRYYG*CETLLS
Trigger: AGACAAAAGGGTTTCACATCAACCATAATACCTCAG...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTTTCACGATGCACACGTaGCGCATGTATGATATCTCC +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTFTMHT*RMYDIS
Trigger: GGAGATATCATACATGCGTCACGTGTGCATCGTGAA...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCGGTAGAAAAAGTGGCTaGAAAATGTCACTGCAACAC +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRGRKSG*KMSLQH
Trigger: GTGTTGCAGTGACATTTTTCAGCCACTTTTTCTACC...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATATTATGACCACATCCTaGGACTTGGAACTGCCAATA +
Preference number: 4 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNIMTTS*DLELPI
Trigger: TATTGGCAGTTCCAAGTCTCAGGATGTGGTCATAAT...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTCTTGGGAGTCACTCCTaGCAAGAAGAGAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTLGSHS*QEEKVF
Trigger: GAAGACTTTCTCTTCTTGTCAGGAGTGACTCCCAAG...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTCAGAGGTATAGATGGTaGTGCTACAGAAAGGCGAGA +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTQRYRW*CYRKAR
Trigger: TCTCGCCTTTCTGTAGCAGCACCATCTATACCTCTG...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAACAAATTCACTGACTaGAACAAATCCGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRNKFTD*NKSELA
Trigger: TGCCAGCTCGGATTTGTTGCAGTCAGTGAATTTGTT...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAGAATTATTGTGGATGTaGAGTTGTCTGGCAAACAAA +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGELLWM*SCLANK
Trigger: TTTGTTTGCCAGACAACTCCACATCCACAATAATTC...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGTTCTCAGAATTATTGTaGATGTGGAGTTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMEFSELL*MWSCLA
Trigger: TGCCAGACAACTCCACATCCACAATAATTCTGAGAA...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CCTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCTAAGATATCTTCTGTaGTATTGTTCATGCTCATGG +
Preference number: 4 (lower is better)
Translates to: PAFHGLFLLDLPSWSQDILRYLL*YCSCSW
Trigger: CCATGAGCATGAACAATACCACAGAAGATATCTTAG...GATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGACTAAGATATCTTCTGTaGTATTGTTCATGCTCATGG +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGLRYLL*YCSCSW
Trigger: CCATGAGCATGAACAATACCACAGAAGATATCTTAG...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAAAGGCAAAAATTATATaGAACGTCAAGGAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGKAKII*NVKEVP
Trigger: AGGCACTTCCTTGACGTTCCATATAATTTTTGCCTT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CCTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCAAGGCAAAAATTATATaGAACGTCAAGGAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: PAFHGLFLLDLPSWSQDIKAKII*NVKEVP
Trigger: AGGCACTTCCTTGACGTTCCATATAATTTTTGCCTT...GATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTAATCCTATTTCTCCATaGAAGTCCTTAGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTNPISP*KSLAQG
Trigger: GCCCTGTGCTAAGGACTTTCATGGAGAAATAGGATT...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTGCGAGATGCACCAGTTaGGTCCTTAAAGAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTARCTS*VLKEFF
Trigger: GAAAAACTCTTTAAGGACTCAACTGGTGCATCTCGC...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCCTGAGGTATTATGGTTaGTGTGAAACCCTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRLRYYG*CETLLS
Trigger: AGACAAAAGGGTTTCACATCAACCATAATACCTCAG...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATGCCTTAATGTTAAAGTaGGAGCCTATGATAAACCAC +
Preference number: 4 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNALMLK*EPMINH
Trigger: GTGGTTTATCATAGGCTCTCACTTTAACATTAAGGC...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGTTAGGAAACGTACCATaGCTTAATTGTCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMELGNVP*LNCLQS
Trigger: ACTTTGGAGACAATTAAGTCATGGTACGTTTCCTAA...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTTCATTTTCATACATaGGGATCTTCACCATCACGT +
Preference number: 4 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNLHFHT*GSSPSR
Trigger: ACGTGATGGTGAAGATCCTCATGTATGAAAATGAAG...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327753.7
CDS-3UTR CCA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAATTATTGTGGATGTaGAGTTGTCTGGCAAACAAA +
Preference number: 4 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMEELLWM*SCLANK
Trigger: TTTGTTTGCCAGACAACTCCACATCCACAATAATTC...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATATATCCAACATCATTTaGCACGCTTTCTCATCCCAT +
Preference number: 4 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNISNII*HAFSSH
Trigger: ATGGGATGAGAAAGCGTGCCAAATGATGTTGGATAT...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAATCTTCACCATCACGTaGCACCTCCCACGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQIFTIT*HLPRSL
Trigger: CAGGGACCGTGGGAGGTGCCACGTGATGGTGAAGAT...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327753.7
CDS-3UTR TCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTATTTCACCATGTCAGTaGTGCAGGCATAATCAAAGG +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTISPCQ*CRHNQR
Trigger: CCTTTGATTATGCCTGCATCACTGACATGGTGAAAT...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAAGGATCCACGCAGAGTaGTGGAGGACTGAGCTATGG +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQRIHAE*WRTELW
Trigger: CCATAGCTCAGTCCTCCATCACTCTGCGTGGATCCT...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATTTAGGAAACGTACCATaGCTTAATTGTCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNLGNVP*LNCLQS
Trigger: ACTTTGGAGACAATTAAGTCATGGTACGTTTCCTAA...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTGGATGTGGAGTTGTCTaGCAAACAAATTCACTGACT +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTGCGVV*QTNSLT
Trigger: AGTCAGTGAATTTGTTTGCCAGACAACTCCACATCC...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCGAATTATTGTGGATGTaGAGTTGTCTGGCAAACAAA +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRELLWM*SCLANK
Trigger: TTTGTTTGCCAGACAACTCCACATCCACAATAATTC...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAAGGCAAAAATTATATaGAACGTCAAGGAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRKAKII*NVKEVP
Trigger: AGGCACTTCCTTGACGTTCCATATAATTTTTGCCTT...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAGGCCGACCAAGAGCTTaGGAGTCACTCCTGACAAGA +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQGRPRA*ESLLTR
Trigger: TCTTGTCAGGAGTGACTCCCAAGCTCTTGGTCGGCC...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTATTTCACTTCGTTCCTaGTATCCAACATCATTTGGC +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTISLRS*YPTSFG
Trigger: GCCAAATGATGTTGGATATCAGGAACGAAGTGAAAT...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAACCAATAGAGGGCCTCTaGGTGTTGACAGCAACAACC +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQPIEGL*VLTATT
Trigger: GGTTGTTGCTGTCAACACTCAGAGGCCCTCTATTGG...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATGACCATAAAATGGCTTaGAGATTGACTCTTAATCTA +
Preference number: 4 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNDHKMA*RLTLNL
Trigger: TAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTC...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTTTCTCAGAATTATTGTaGATGTGGAGTTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTFSELL*MWSCLA
Trigger: TGCCAGACAACTCCACATCCACAATAATTCTGAGAA...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTATATCCAACATCATTTaGCACGCTTTCTCATCCCAT +
Preference number: 4 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTISNII*HAFSSH
Trigger: ATGGGATGAGAAAGCGTGCCAAATGATGTTGGATAT...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAAGGGCCTCTGAGTGTTaGCAGCAACAACCAAAACCA +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQRASEC*QQQPKP
Trigger: TGGTTTTGGTTGTTGCTGTCAACACTCAGAGGCCCT...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAGATAGCCCCCAAGGTTaGGAAAGCTATGCTAATGGC +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQDSPQG*ESYANG
Trigger: GCCATTAGCATAGCTTTCCCAACCTTGGGGGCTATC...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAAATGAAAGCCCAGTTTaGAATGGCTGCTGTGTCGAG +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQNESPV*NGCCVE
Trigger: CTCGACACAGCAGCCATTTCAAACTGGGCTTTCATT...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAACACTGTGGCTTCAATaGTCAGGCAAAGAACCAAGC +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQTLWLQ*SGKEPS
Trigger: GCTTGGTTCTTTGCCTGATCATTGAAGCCACAGTGT...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAAGGTATAGATGGTGCTaGTACAGAAAGGCGAGATGC +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQRYRWC*YRKARC
Trigger: GCATCTCGCCTTTCTGTAGCAGCACCATCTATACCT...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAACAGAGGTATAGATGGTaGTGCTACAGAAAGGCGAGA +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQQRYRW*CYRKAR
Trigger: TCTCGCCTTTCTGTAGCAGCACCATCTATACCTCTG...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAGGGGTCCATAAATCATaGTCCTTAAAGCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQGVHKS*SLKPSQ
Trigger: CTGACTGGGCTTTAAGGAGCATGATTTATGGACCCC...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAATCTCCATTTTTGAAATaGGAGTCCAAGGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQSPFLK*ESKGPS
Trigger: ACTGGGCCCCTTGGACTCCCATTTCAAAAATGGAGA...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS-3UTR CCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAAGGGCTGGCTGCAGTTaGAAGAAGAAATACAAGGTC +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQRAGCS*KKKYKV
Trigger: GACCTTGTATTTCTTCTTCCAACTGCAGCCAGCCCT...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAGAGCTACACTCTCAATaGTCTCTGGAGCTCGAAAGT +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQELHSQ*SLELES
Trigger: ACTTTCGAGCTCCAGAGACCATTGAGAGTGTAGCTC...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAAAGCCCAGTTTGAAATaGCTGCTGTGTCGAGGATGT +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQKPSLK*LLCRGC
Trigger: ACATCCTCGACACAGCAGCCATTTCAAACTGGGCTT...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAAGGAAGTGCCTTCTATaGGAGTGGCTATTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQRKCLL*EWLFQN
Trigger: GTTTTGGAATAGCCACTCTCATAGAAGGCACTTCCT...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR TCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAATTTCACCATGTCAGTaGTGCAGGCATAATCAAAGG +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQISPCQ*CRHNQR
Trigger: CCTTTGATTATGCCTGCATCACTGACATGGTGAAAT...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAAACAAATTCACTGACTaGAACAAATCCGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQNKFTD*NKSELA
Trigger: TGCCAGCTCGGATTTGTTGCAGTCAGTGAATTTGTT...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAACTAAGCAGCAAATCATaGTTGCCTGGGACTTCATTT +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQLSSKS*LPGTSF
Trigger: AAATGAAGTCCCAGGCAACCATGATTTGCTGCTTAG...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS-3UTR GCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAACGAAAGTCTAGAATATaGAGAGGTATAGATGGTGCT +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQRKSRI*RGIDGA
Trigger: AGCACCATCTATACCTCTGCATATTCTAGACTTTCG...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR GCA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAGACCATAAAATGGCTTaGAGATTGACTCTTAATCTA +
Preference number: 4 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQDHKMA*RLTLNL
Trigger: TAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTC...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCCGGCCGACCAAGAGCTaGGGAGTCACTCCTGACAAG +
Preference number: 5 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPRPTKS*GVTPDK
Trigger: CTTGTCAGGAGTGACTCCCAAGCTCTTGGTCGGCCG...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCTGGATCCTTCCAGTCTaGGGTTTCCCTTCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPWILPV*GFPSGL
Trigger: AAGCCCTGAAGGGAAACCCAAGACTGGAAGGATCCA...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCTCCGAGCTGGCATTTTaGTTGGGAATGAAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPSELAF*LGMKAQ
Trigger: CTGGGCTTTCATTCCCAACAAAAATGCCAGCTCGGA...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCCACTGGGCTCTGGCATaGCGGGTTTTATTGATCTTT +
Preference number: 5 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPHWALA*RVLLIF
Trigger: AAAGATCAATAAAACCCGCAATGCCAGAGCCCAGTG...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGCAAGAAGCCAGCCTCTaGCAGGGCACGGGTAGGTTA +
Preference number: 5 (lower is better)
Translates to: SYGATEQASGVKDDQAQQQEASL*QGTGRL
Trigger: TAACCTACCCGTGCCCTGCAAGAGGCTGGCTTCTTG...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCTTTCCCTTCAGGGCTTaGAAGTTTATCTCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPFPFRA*KFISSF
Trigger: AAAGCTGGAGATAAACTTCAAAGCCCTGAAGGGAAA...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGTGGATCCTTCCAGTCTaGGGTTTCCCTTCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: SYGATEQASGVKDDQAQQWILPV*GFPSGL
Trigger: AAGCCCTGAAGGGAAACCCAAGACTGGAAGGATCCA...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGCGGCCGACCAAGAGCTaGGGAGTCACTCCTGACAAG +
Preference number: 5 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMERPTKS*GVTPDK
Trigger: CTTGTCAGGAGTGACTCCCAAGCTCTTGGTCGGCCG...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCCAAGAAGCCAGCCTCTaGCAGGGCACGGGTAGGTTA +
Preference number: 5 (lower is better)
Translates to: LLSMASFSWISPLGLRTSQEASL*QGTGRL
Trigger: TAACCTACCCGTGCCCTGCAAGAGGCTGGCTTCTTG...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGTCCTTCGCATTTCTCTaGGATCCTTCCAGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: SYGATEQASGVKDDQAQQSFAFL*DPSSLG
Trigger: CCCAAGACTGGAAGGATCCAAGAGAAATGCGAAGGA...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGCAGGGCTGGCTGCAGTaGGAAGAAGAAATACAAGGT +
Preference number: 5 (lower is better)
Translates to: SYGATEQASGVKDDQAQQQGWLQ*EEEIQG
Trigger: ACCTTGTATTTCTTCTTCCAACTGCAGCCAGCCCTG...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGGAAGACTCACATTTaGCAAGTGGGCTTCTCTCAG +
Preference number: 5 (lower is better)
Translates to: SYGATEQASGVKDDQAQQGKTHI*QVGFSQ
Trigger: CTGAGAGAAGCCCACTTGCAAAATGTGAGTCTTCCC...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGCAAGAAGCCAGCCTCTaGCAGGGCACGGGTAGGTTA +
Preference number: 5 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMEQEASL*QGTGRL
Trigger: TAACCTACCCGTGCCCTGCAAGAGGCTGGCTTCTTG...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CCTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCAGAACTGACTGCCTGTaGCGAGAAGCCGATCTGAGA +
Preference number: 5 (lower is better)
Translates to: PAFHGLFLLDLPSWSQDIRTDCL*READLR
Trigger: TCTCAGATCGGCTTCTCGCAACAGGCAGTCAGTTCT...GATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS-3UTR CAA 90 bp CCTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCTGGCTTGGGATGCATTaGGCCACAGCTTCCTTAGCT +
Preference number: 5 (lower is better)
Translates to: PAFHGLFLLDLPSWSQDIWLGMH*ATASLA
Trigger: AGCTAAGGAAGCTGTGGCCAAATGCATCCCAAGCCA...GATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGATGGCTTGGGATGCATTaGGCCACAGCTTCCTTAGCT +
Preference number: 5 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGWLGMH*ATASLA
Trigger: AGCTAAGGAAGCTGTGGCCAAATGCATCCCAAGCCA...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGGCCCTACAGCCCCCAAAATGGCTTGCAGATaGACTCTTAATCTAGTCAAG +
Preference number: 5 (lower is better)
Translates to: EQASGVKDDQAQQGPTAPKMACR*TLNLVK
Trigger: CTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTT...GGGGGCTGTAGGGCCCTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CCA 90 bp CTCCAGCCTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTaGTCTCAGGACATCCATGAGAAATGGGGCAGCATTTCATCCTTG +
Preference number: 5 (lower is better)
Translates to: LQPAFHGLFLLDLPS*SQDIHEKWGSISSL
Trigger: CAAGGATGAAATGCTGCCCCATTTCTCATGGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAGGCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGTGGATCCTTCCAGTCTaGGGTTTCCCTTCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMEWILPV*GFPSGL
Trigger: AAGCCCTGAAGGGAAACCCAAGACTGGAAGGATCCA...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCTCCTTCGCATTTCTCTaGGATCCTTCCAGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: LLSMASFSWISPLGLRTSSFAFL*DPSSLG
Trigger: CCCAAGACTGGAAGGATCCAAGAGAAATGCGAAGGA...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCCAGGGCTGGCTGCAGTaGGAAGAAGAAATACAAGGT +
Preference number: 5 (lower is better)
Translates to: LLSMASFSWISPLGLRTSQGWLQ*EEEIQG
Trigger: ACCTTGTATTTCTTCTTCCAACTGCAGCCAGCCCTG...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGTTCTTACGGATTCCTaGAGCTACACTCTCAATGGT +
Preference number: 5 (lower is better)
Translates to: SYGATEQASGVKDDQAQQVLTDS*SYTLNG
Trigger: ACCATTGAGAGTGTAGCTCAAGGAATCCGTAAGAAC...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGAGCTGGCATTTTTGTaGGGAATGAAAGCCCAGTTT +
Preference number: 5 (lower is better)
Translates to: SYGATEQASGVKDDQAQQELAFL*GMKAQF
Trigger: AAACTGGGCTTTCATTCCCAACAAAAATGCCAGCTC...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCAGCTATGCTAATGGCTaGGGATGCATTTGGCCACAG +
Preference number: 5 (lower is better)
Translates to: LLSMASFSWISPLGLRTSSYANG*GCIWPQ
Trigger: CTGTGGCCAAATGCATCCCAAGCCATTAGCATAGCT...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAGGGAAGACTCACATTTaGCAAGTGGGCTTCTCTCAG +
Preference number: 5 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGGKTHI*QVGFSQ
Trigger: CTGAGAGAAGCCCACTTGCAAAATGTGAGTCTTCCC...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGTCCCATCTCCTTTTCTaGGAGTGCCAGCCAACACAC +
Preference number: 5 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMESHLLF*ECQPTH
Trigger: GTGTGTTGGCTGGCACTCCAAGAAAAGGAGATGGGA...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGGATATCCAACATCATTaGGCACGCTTTCTCATCCCA +
Preference number: 5 (lower is better)
Translates to: SYGATEQASGVKDDQAQQDIQHH*ARFLIP
Trigger: TGGGATGAGAAAGCGTGCCAAATGATGTTGGATATC...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGATGATAAACCACACATaGGCAGTCAGAAGGGACACT +
Preference number: 5 (lower is better)
Translates to: SYGATEQASGVKDDQAQQMINHT*AVRRDT
Trigger: AGTGTCCCTTCTGACTGCCAATGTGTGGTTTATCAT...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTCGGCCGACCAAGAGCTaGGGAGTCACTCCTGACAAG +
Preference number: 5 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTRPTKS*GVTPDK
Trigger: CTTGTCAGGAGTGACTCCCAAGCTCTTGGTCGGCCG...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCACCCTACCCCTAAAATaGGATCGAACCCTCACTGTC +
Preference number: 5 (lower is better)
Translates to: LLSMASFSWISPLGLRTSTLPLK*DRTLTV
Trigger: GACAGTGAGGGTTCGATCCAATTTTAGGGGTAGGGT...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAACTGACTGCCTGTaGCGAGAAGCCGATCTGAGA +
Preference number: 5 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRRTDCL*READLR
Trigger: TCTCAGATCGGCTTCTCGCAACAGGCAGTCAGTTCT...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS-3UTR CAA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCTGGCTTGGGATGCATTaGGCCACAGCTTCCTTAGCT +
Preference number: 5 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRWLGMH*ATASLA
Trigger: AGCTAAGGAAGCTGTGGCCAAATGCATCCCAAGCCA...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGAGCTATGCTAATGGCTaGGGATGCATTTGGCCACAG +
Preference number: 5 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMESYANG*GCIWPQ
Trigger: CTGTGGCCAAATGCATCCCAAGCCATTAGCATAGCT...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGACACTGGGCTCTGGCATaGCGGGTTTTATTGATCTTT +
Preference number: 5 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGHWALA*RVLLIF
Trigger: AAAGATCAATAAAACCCGCAATGCCAGAGCCCAGTG...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATTCCCATCTCCTTTTCTaGGAGTGCCAGCCAACACAC +
Preference number: 5 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNSHLLF*ECQPTH
Trigger: GTGTGTTGGCTGGCACTCCAAGAAAAGGAGATGGGA...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGACCCTACCCCTAAAATaGGATCGAACCCTCACTGTC +
Preference number: 5 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMETLPLK*DRTLTV
Trigger: GACAGTGAGGGTTCGATCCAATTTTAGGGGTAGGGT...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS TCA 90 bp CAGAAGGGACACTGCTATATTCACGATGCACACGTGACGCATGTATaGTATCTCCGTCACAACCACCCGGGACCACACTGTGGCTTCAAT +
Preference number: 5 (lower is better)
Translates to: QKGHCYIHDAHVTHV*YLRHNHPGPHCGFN
Trigger: ATTGAAGCCACAGTGTGGTCCCGGGTGGTTGTGACGGAGATATCATACATGCGTCACGTGTGCATCGTGAATATAGCAGTGTCCCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS TCA 90 bp ACATTGGCAGTCAGAAGGGACACTGCTATATTCACGATGCACACGTaGCGCATGTATGATATCTCCGTCACAACCACCCGGGACCACACT +
Preference number: 5 (lower is better)
Translates to: TLAVRRDTAIFTMHT*RMYDISVTTTRDHT
Trigger: AGTGTGGTCCCGGGTGGTTGTGACGGAGATATCATACATGCGTCACGTGTGCATCGTGAATATAGCAGTGTCCCTTCTGACTGCCAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCAGCAGCAAATCATGGTaGCCTGGGACTTCATTTTCA +
Preference number: 5 (lower is better)
Translates to: LLSMASFSWISPLGLRTSSSKSW*PGTSFS
Trigger: TGAAAATGAAGTCCCAGGCAACCATGATTTGCTGCT...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS-3UTR CAA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCTCCTTCGCATTTCTCTaGGATCCTTCCAGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRSFAFL*DPSSLG
Trigger: CCCAAGACTGGAAGGATCCAAGAGAAATGCGAAGGA...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGTTTCCACAGAAAGGCTaGTACATGTTTCAGCTGATT +
Preference number: 5 (lower is better)
Translates to: SYGATEQASGVKDDQAQQFPQKG*YMFQLI
Trigger: AATCAGCTGAAACATGTACAAGCCTTTCTGTGGAAA...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCTCCGAGCTGGCATTTTaGTTGGGAATGAAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRSELAF*LGMKAQ
Trigger: CTGGGCTTTCATTCCCAACAAAAATGCCAGCTCGGA...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATTCCGAGCTGGCATTTTaGTTGGGAATGAAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNSELAF*LGMKAQ
Trigger: CTGGGCTTTCATTCCCAACAAAAATGCCAGCTCGGA...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCTTGTCGGTCATCGATTaGGAGGACATGAGAATGGAA +
Preference number: 5 (lower is better)
Translates to: LLSMASFSWISPLGLRTSLSVID*EDMRME
Trigger: TTCCATTCTCATGTCCTCCAAATCGATGACCGACAA...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CCTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCATGATAAACCACACATaGGCAGTCAGAAGGGACACT +
Preference number: 5 (lower is better)
Translates to: PAFHGLFLLDLPSWSQDIMINHT*AVRRDT
Trigger: AGTGTCCCTTCTGACTGCCAATGTGTGGTTTATCAT...GATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGATGATGAGCAATGCTTaGAAGAGCATCCAGAAAAAC +
Preference number: 5 (lower is better)
Translates to: SYGATEQASGVKDDQAQQMMSNA*KSIQKN
Trigger: GTTTTTCTGGATGCTCTTCAAAGCATTGCTCATCAT...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp AGCTATGGAGCCACAGAGCAGGCCTCAGGAGTGAAAGACGACCAAGCCCAGCAGATTAATTTAGATCCATaGGTTGGGCCTAGTGATGCA +
Preference number: 5 (lower is better)
Translates to: SYGATEQASGVKDDQAQQINLDP*VGPSDA
Trigger: TGCATCACTAGGCCCAACCAATGGATCTAAATTAAT...CTGCTGGGCTTGGTCGTCTTTCACTCCTGAGGCCTGCTCTGTGGCTCCATAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CCA 90 bp ACTCACATTTTGCAAGTGGGCTTCTCTCAGGATAGCCCCCAAGGTTaGGAAAGCTATGCTAATGGCTTGGGATGCATTTGGCCACAGCTT +
Preference number: 5 (lower is better)
Translates to: THILQVGFSQDSPQG*ESYANGLGCIWPQL
Trigger: AAGCTGTGGCCAAATGCATCCCAAGCCATTAGCATAGCTTTCCCAACCTTGGGGGCTATCCTGAGAGAAGCCCACTTGCAAAATGTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CCA 90 bp AGCACCAGACCATTTACCTGTCTGGGAAGACTCACATTTTGCAAGTaGGCTTCTCTCAGGATAGCCCCCAAGGTTGGGAAAGCTATGCTA +
Preference number: 5 (lower is better)
Translates to: STRPFTCLGRLTFCK*ASLRIAPKVGKAML
Trigger: TAGCATAGCTTTCCCAACCTTGGGGGCTATCCTGAGAGAAGCCCACTTGCAAAATGTGAGTCTTCCCAGACAGGTAAATGGTCTGGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CCA 90 bp GTCCCAGTTAAGCCAACAGGCCTCAGGTCTCATGTAGCCTTTCTCTaGCTCTGTGATAGCAACTGTAGTGACAGCAATGATCAATGGGCA +
Preference number: 5 (lower is better)
Translates to: VPVKPTGLRSHVAFL*LCDSNCSDSNDQWA
Trigger: TGCCCATTGATCATTGCTGTCACTACAGTTGCTATCACAGAGCCAGAGAAAGGCTACATGAGACCTGAGGCCTGTTGGCTTAACTGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCATTGTGGATGTGGAGTaGTCTGGCAAACAAATTCAC +
Preference number: 5 (lower is better)
Translates to: LLSMASFSWISPLGLRTSIVDVE*SGKQIH
Trigger: GTGAATTTGTTTGCCAGACAACTCCACATCCACAAT...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CCTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCATTGTGGATGTGGAGTaGTCTGGCAAACAAATTCAC +
Preference number: 5 (lower is better)
Translates to: PAFHGLFLLDLPSWSQDIIVDVE*SGKQIH
Trigger: GTGAATTTGTTTGCCAGACAACTCCACATCCACAAT...GATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCGCATTGCGGGTTTTATaGATCTTTTCGAAGGTGAGT +
Preference number: 5 (lower is better)
Translates to: LLSMASFSWISPLGLRTSALRVL*IFSKVS
Trigger: ACTCACCTTCGAAAAGATCAATAAAACCCGCAATGC...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCCACTGGGCTCTGGCATaGCGGGTTTTATTGATCTTT +
Preference number: 5 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRHWALA*RVLLIF
Trigger: AAAGATCAATAAAACCCGCAATGCCAGAGCCCAGTG...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTTCCCATCTCCTTTTCTaGGAGTGCCAGCCAACACAC +
Preference number: 5 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTSHLLF*ECQPTH
Trigger: GTGTGTTGGCTGGCACTCCAAGAAAAGGAGATGGGA...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGATGATAAACCACACATaGGCAGTCAGAAGGGACACT +
Preference number: 5 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMEMINHT*AVRRDT
Trigger: AGTGTCCCTTCTGACTGCCAATGTGTGGTTTATCAT...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAAATGCTAAAAGGGCTTaGGTATTGTCCCAGTTAAGC +
Preference number: 5 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGNAKRA*VLSQLS
Trigger: GCTTAACTGGGACAATACCAAAGCCCTTTTAGCATT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS TCA 90 bp TCTTCTCCATTTTTGAAATGGGAGTCCAAGGGGCCCAGTGAGAACTaGCTGCCTGTTGCGAGAAGCCGATCTGAGAACTGTAAAGTTACC +
Preference number: 5 (lower is better)
Translates to: SSPFLKWESKGPSEN*LPVARSRSENCKVT
Trigger: GGTAACTTTACAGTTCTCAGATCGGCTTCTCGCAACAGGCAGTCAGTTCTCACTGGGCCCCTTGGACTCCCATTTCAAAAATGGAGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327753.7
CDS-3UTR CAA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGCAGCAAATCATGGTaGCCTGGGACTTCATTTTCA +
Preference number: 5 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRSSKSW*PGTSFS
Trigger: TGAAAATGAAGTCCCAGGCAACCATGATTTGCTGCT...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS-3UTR CAA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCGTTCTTACGGATTCCTaGAGCTACACTCTCAATGGT +
Preference number: 5 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRVLTDS*SYTLNG
Trigger: ACCATTGAGAGTGTAGCTCAAGGAATCCGTAAGAAC...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCGAGCTGGCATTTTTGTaGGGAATGAAAGCCCAGTTT +
Preference number: 5 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRELAFL*GMKAQF
Trigger: AAACTGGGCTTTCATTCCCAACAAAAATGCCAGCTC...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCATGTTCTCAGAATTATaGTGGATGTGGAGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: LLSMASFSWISPLGLRTSMFSEL*WMWSCL
Trigger: CAGACAACTCCACATCCACAATAATTCTGAGAACAT...GGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTAGCTATGCTAATGGCTaGGGATGCATTTGGCCACAG +
Preference number: 5 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTSYANG*GCIWPQ
Trigger: CTGTGGCCAAATGCATCCCAAGCCATTAGCATAGCT...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATGATATCCAACATCATTaGGCACGCTTTCTCATCCCA +
Preference number: 5 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNDIQHH*ARFLIP
Trigger: TGGGATGAGAAAGCGTGCCAAATGATGTTGGATATC...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATTTGTCGGTCATCGATTaGGAGGACATGAGAATGGAA +
Preference number: 5 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNLSVID*EDMRME
Trigger: TTCCATTCTCATGTCCTCCAAATCGATGACCGACAA...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CCTGCTTTCCATGGCCTCTTTCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCATGATGAGCAATGCTTaGAAGAGCATCCAGAAAAAC +
Preference number: 5 (lower is better)
Translates to: PAFHGLFLLDLPSWSQDIMMSNA*KSIQKN
Trigger: GTTTTTCTGGATGCTCTTCAAAGCATTGCTCATCAT...GATGTCCTGAGACCAAGAGGGGAGATCCAGGAGAAAGAGGCCATGGAAAGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAATGATGAGCAATGCTTaGAAGAGCATCCAGAAAAAC +
Preference number: 5 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGMMSNA*KSIQKN
Trigger: GTTTTTCTGGATGCTCTTCAAAGCATTGCTCATCAT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGAATGCTAAAAGGGCTTaGGTATTGTCCCAGTTAAGC +
Preference number: 5 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMENAKRA*VLSQLS
Trigger: GCTTAACTGGGACAATACCAAAGCCCTTTTAGCATT...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAATTAATTTAGATCCATaGGTTGGGCCTAGTGATGCA +
Preference number: 5 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGINLDP*VGPSDA
Trigger: TGCATCACTAGGCCCAACCAATGGATCTAAATTAAT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTACCCTACCCCTAAAATaGGATCGAACCCTCACTGTC +
Preference number: 5 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTTLPLK*DRTLTV
Trigger: GACAGTGAGGGTTCGATCCAATTTTAGGGGTAGGGT...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CCA 90 bp TTTCTCTGGCTCTGTGATAGCAACTGTAGTGACAGCAATGATCAATaGGCACCCATAGCCAATGGCAAAGCCAATGACCATCATTCGGGA +
Preference number: 5 (lower is better)
Translates to: FLWLCDSNCSDSNDQ*APIANGKANDHHSG
Trigger: TCCCGAATGATGGTCATTGGCTTTGCCATTGGCTATGGGTGCCCATTGATCATTGCTGTCACTACAGTTGCTATCACAGAGCCAGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGTTTCCACAGAAAGGCTaGTACATGTTTCAGCTGATT +
Preference number: 5 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMEFPQKG*YMFQLI
Trigger: AATCAGCTGAAACATGTACAAGCCTTTCTGTGGAAA...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATATTGTGGATGTGGAGTaGTCTGGCAAACAAATTCAC +
Preference number: 5 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNIVDVE*SGKQIH
Trigger: GTGAATTTGTTTGCCAGACAACTCCACATCCACAAT...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGGAATATCTTCTGTGGTATaGTTCATGCTCATGGAGAAA +
Preference number: 5 (lower is better)
Translates to: GSNPHCPKYPGSTQSDGGISSVV*FMLMEK
Trigger: TTTCTCCATGAGCATGAACAATACCACAGAAGATAT...TCCTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATGCATTGCGGGTTTTATaGATCTTTTCGAAGGTGAGT +
Preference number: 5 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNALRVL*IFSKVS
Trigger: ACTCACCTTCGAAAAGATCAATAAAACCCGCAATGC...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCGCATTGCGGGTTTTATaGATCTTTTCGAAGGTGAGT +
Preference number: 5 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRALRVL*IFSKVS
Trigger: ACTCACCTTCGAAAAGATCAATAAAACCCGCAATGC...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS TCA 90 bp AATTCACTGACTGCAACAAATCCGAGCTGGCATTTTTGTTGGGAATaGAAGCCCAGTTTGAAATGGCTGCTGTGTCGAGGATGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: NSLTATNPSWHFCWE*KPSLKWLLCRGCGW
Trigger: CCAACCACATCCTCGACACAGCAGCCATTTCAAACTGGGCTTTCATTCCCAACAAAAATGCCAGCTCGGATTTGTTGCAGTCAGTGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CTACCCCTAAAATTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCATGTTCTCAGAATTATaGTGGATGTGGAGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: LPLKLDRTLTVQSTQDPRMFSEL*WMWSCL
Trigger: CAGACAACTCCACATCCACAATAATTCTGAGAACAT...GCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAATTTTAGGGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTTTGTCGGTCATCGATTaGGAGGACATGAGAATGGAA +
Preference number: 5 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTLSVID*EDMRME
Trigger: TTCCATTCTCATGTCCTCCAAATCGATGACCGACAA...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp TTGGATCGAACCCTCACTGTCCAAAGTACCCAGGATCCACGCAGAGTGATGGAGAGGATGGCAACATTTTaGCTGATCCTCATAATTATG +
Preference number: 5 (lower is better)
Translates to: LDRTLTVQSTQDPRRVMERMATF*LILIIM
Trigger: CATAATTATGAGGATCAGCAAAAATGTTGCCATCCT...CTCCATCACTCTGCGTGGATCCTGGGTACTTTGGACAGTGAGGGTTCGATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS TCA 90 bp ACATCACCACACTGGTGTAGTTACAGCGGCATTTCACTTCGTTCCTaGTATCCAACATCATTTGGCACGCTTTCTCATCCCATCTCCTTT +
Preference number: 5 (lower is better)
Translates to: TSPHWCSYSGISLRS*YPTSFGTLSHPISF
Trigger: AAAGGAGATGGGATGAGAAAGCGTGCCAAATGATGTTGGATATCAGGAACGAAGTGAAATGCCGCTGTAACTACACCAGTGTGGTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATATATCTTCTGTGGTATaGTTCATGCTCATGGAGAAA +
Preference number: 5 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNISSVV*FMLMEK
Trigger: TTTCTCCATGAGCATGAACAATACCACAGAAGATAT...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATAGGATGGCAACATTTTaGCTGATCCTCATAATTATG +
Preference number: 5 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNRMATF*LILIIM
Trigger: CATAATTATGAGGATCAGCAAAAATGTTGCCATCCT...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp CAGCCCCCAGCTGGCCAGGGAGACCATAAAATGGCTTGCAGATTGACTCTTAATAAAATGGCTTGCAGATaGACTCTTAATCTAGTCAAG +
Preference number: 5 (lower is better)
Translates to: QPPAGQGDHKMACRLTLNKMACR*TLNLVK
Trigger: CTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTT...ATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCCCTGGCCAGCTGGGGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CCA 90 bp CATTCTGTGGACAGAAAGAACACTAAGCAGCAAATCATGGTTGCCTaGGACTTCATTTTCATACATGAGGATCTTCACGGCATCCAGGAA +
Preference number: 5 (lower is better)
Translates to: HSVDRKNTKQQIMVA*DFIFIHEDLHGIQE
Trigger: TTCCTGGATGCCGTGAAGATCCTCATGTATGAAAATGAAGTCCCAGGCAACCATGATTTGCTGCTTAGTGTTCTTTCTGTCCACAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283303.3
CDS CCA 90 bp AGTGGGAACATTCTGTGGACAGAAAGAACACTAAGCAGCAAATCATaGTTGCCTGGGACTTCATTTTCATACATGAGGATCTTCACGGCA +
Preference number: 5 (lower is better)
Translates to: SGNILWTERTLSSKS*LPGTSFSYMRIFTA
Trigger: TGCCGTGAAGATCCTCATGTATGAAAATGAAGTCCCAGGCAACCATGATTTGCTGCTTAGTGTTCTTTCTGTCCACAGAATGTTCCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283303.3
CDS CCA 90 bp CTCCAGCTTTTAGGTGAATCTTGGATCTATAGTGGGAACATTCTGTaGACAGAAAGAACACTAAGCAGCAAATCATGGTTGCCTGGGACT +
Preference number: 5 (lower is better)
Translates to: LQLLGESWIYSGNIL*TERTLSSKSWLPGT
Trigger: AGTCCCAGGCAACCATGATTTGCTGCTTAGTGTTCTTTCTGTCCACAGAATGTTCCCACTATAGATCCAAGATTCACCTAAAAGCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS CCA 90 bp CATTCTGTGGACAGAAAGAACACTAAGCAGCAAATCATGGTTGCCTaGGACTTCATTTTCATACATGAGGATCTTCACCATCACGTGGCA +
Preference number: 5 (lower is better)
Translates to: HSVDRKNTKQQIMVA*DFIFIHEDLHHHVA
Trigger: TGCCACGTGATGGTGAAGATCCTCATGTATGAAAATGAAGTCCCAGGCAACCATGATTTGCTGCTTAGTGTTCTTTCTGTCCACAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327753.7
CDS CCA 90 bp GGTGCATGGGTTGTATACAGCTGGCACCATAAAGATGTTACAACCTaGTATTCATCGCTGAGAACAATACCAAACCTACCGCTATTTGGT +
Preference number: 5 (lower is better)
Translates to: GAWVVYSWHHKDVTT*YSSLRTIPNLPLFG
Trigger: ACCAAATAGCGGTAGGTTTGGTATTGTTCTCAGCGATGAATACCAGGTTGTAACATCTTTATGGTGCCAGCTGTATACAACCCATGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371220.5
CDS-3UTR CAA 90 bp CAGCAAATGTTATCCTCAGTTTTTCTTCGGCCGACCAAGAGCTTGGGAGTCACTTTTCCACAGAAAGGCTaGTACATGTTTCAGCTGATT +
Preference number: 5 (lower is better)
Translates to: QQMLSSVFLRPTKSLGVTFPQKG*YMFQLI
Trigger: AATCAGCTGAAACATGTACAAGCCTTTCTGTGGAAA...AGTGACTCCCAAGCTCTTGGTCGGCCGAAGAAAAACTGAGGATAACATTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS GCA 90 bp GAATTATTGTGGATGTGGAGTTGTCTGGCAAACAAATTCACTGACTaGAACAAATCCGAGCTGGCATTTTTGTTGGGAATGAAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: ELLWMWSCLANKFTD*NKSELAFLLGMKAQ
Trigger: CTGGGCTTTCATTCCCAACAAAAATGCCAGCTCGGATTTGTTGCAGTCAGTGAATTTGTTTGCCAGACAACTCCACATCCACAATAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CCA 90 bp AGTGGGAACATTCTGTGGACAGAAAGAACACTAAGCAGCAAATCATaGTTGCCTGGGACTTCATTTTCATACATGAGGATCTTCACCATC +
Preference number: 5 (lower is better)
Translates to: SGNILWTERTLSSKS*LPGTSFSYMRIFTI
Trigger: GATGGTGAAGATCCTCATGTATGAAAATGAAGTCCCAGGCAACCATGATTTGCTGCTTAGTGTTCTTTCTGTCCACAGAATGTTCCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327753.7
CDS-3UTR CAA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAACATTCCAGAGGCCTGTaGAGGTGCATGGGTTGTATA +
Preference number: 5 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQHSRGL*RCMGCI
Trigger: TATACAACCCATGCACCTCAACAGGCCTCTGGAATG...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371220.5
CDS TCA 90 bp CTCAGAATTATTGTGGATGTGGAGTTGTCTGGCAAACAAATTCACTaGCTGCAACAAATCCGAGCTGGCATTTTTGTTGGGAATGAAAGC +
Preference number: 5 (lower is better)
Translates to: LRIIVDVELSGKQIH*LQQIRAGIFVGNES
Trigger: GCTTTCATTCCCAACAAAAATGCCAGCTCGGATTTGTTGCAGTCAGTGAATTTGTTTGCCAGACAACTCCACATCCACAATAATTCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS TCA 90 bp TATACAGCTGGCACCATAAAGATGTTACAACCTGGTATTCATCGCTaGGAACAATACCAAACCTACCGCTATTTGGTAAAAGCCCAGATG +
Preference number: 5 (lower is better)
Translates to: YTAGTIKMLQPGIHR*EQYQTYRYLVKAQM
Trigger: CATCTGGGCTTTTACCAAATAGCGGTAGGTTTGGTATTGTTCTCAGCGATGAATACCAGGTTGTAACATCTTTATGGTGCCAGCTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371220.5
CDS TCA 90 bp ATGCAATATTTCCAGATGTTGTTTCTGATGATTTCACCATGTCAGTaGTGCAGGCATAATCAAAGGGGCAGTTCTTACGGATTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: MQYFQMLFLMISPCQ*CRHNQRGSSYGFLE
Trigger: CTCAAGGAATCCGTAAGAACTGCCCCTTTGATTATGCCTGCATCACTGACATGGTGAAATCATCAGAAACAACATCTGGAAATATTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAGTTCTTACGGATTCCTaGAGCTACACTCTCAATGGT +
Preference number: 5 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQVLTDS*SYTLNG
Trigger: ACCATTGAGAGTGTAGCTCAAGGAATCCGTAAGAAC...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAGAGCTGGCATTTTTGTaGGGAATGAAAGCCCAGTTT +
Preference number: 5 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQELAFL*GMKAQF
Trigger: AAACTGGGCTTTCATTCCCAACAAAAATGCCAGCTC...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAGATATCCAACATCATTaGGCACGCTTTCTCATCCCA +
Preference number: 5 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQDIQHH*ARFLIP
Trigger: TGGGATGAGAAAGCGTGCCAAATGATGTTGGATATC...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CCA 90 bp GTTCATTCACAATGTTCTCAGAATTATTGTGGATGTGGAGTTGTCTaGCAAACAAATTCACTGACTGCAACAAATCCGAGCTGGCATTTT +
Preference number: 5 (lower is better)
Translates to: VHSQCSQNYCGCGVV*QTNSLTATNPSWHF
Trigger: AAAATGCCAGCTCGGATTTGTTGCAGTCAGTGAATTTGTTTGCCAGACAACTCCACATCCACAATAATTCTGAGAACATTGTGAATGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAAATGCTAAAAGGGCTTaGGTATTGTCCCAGTTAAGC +
Preference number: 5 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQNAKRA*VLSQLS
Trigger: GCTTAACTGGGACAATACCAAAGCCCTTTTAGCATT...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS TCA 90 bp TTCTGTGGTATTGTTCATGCTCATGGAGAAATTGAGGCTTTTCTCTaGGGTATTATGGTTGATGTGAAACCCTTTTGTCTGAATGAAGAG +
Preference number: 5 (lower is better)
Translates to: FCGIVHAHGEIEAFL*GIMVDVKPFCLNEE
Trigger: CTCTTCATTCAGACAAAAGGGTTTCACATCAACCATAATACCTCAGAGAAAAGCCTCAATTTCTCCATGAGCATGAACAATACCACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAAGGATGGCAACATTTTaGCTGATCCTCATAATTATG +
Preference number: 5 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQRMATF*LILIIM
Trigger: CATAATTATGAGGATCAGCAAAAATGTTGCCATCCT...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS-3UTR CAA 90 bp GGAGACCATAAAATGGCTTGCAGATTGACTCTTAATCTAGTCAAGATTGACCAAAAAATGGCTTGCAGATaGACTCTTAATCTAGTCAAG +
Preference number: 5 (lower is better)
Translates to: GDHKMACRLTLNLVKIDQKMACR*TLNLVK
Trigger: CTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTT...TTGGTCAATCTTGACTAGATTAAGAGTCAATCTGCAAGCCATTTTATGGTCTCC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS TCA 72 bp CCGTCACAACCACCCGGGACCACACTGTGGCTTCAATaGTCAGGCAAAGAACCAAGCTTAGGATTGAGACGC +
Preference number: 6 (lower is better)
Translates to: PSQPPGTTLWLQ*SGKEPSLGLRR
Trigger: GCGTCTCAATCCTAAGCTTGGTTCTTTGCCTGATCATTGAAGCCACAGTGTGGTCCCGGGTGGTTGTGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS TCA 72 bp TTTTTGAAATGGGAGTCCAAGGGGCCCAGTGAGAACTaGCTGCCTGTTGCGAGAAGCCGATCTGAGAACTGT +
Preference number: 6 (lower is better)
Translates to: FLKWESKGPSEN*LPVARSRSENC
Trigger: ACAGTTCTCAGATCGGCTTCTCGCAACAGGCAGTCAGTTCTCACTGGGCCCCTTGGACTCCCATTTCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS TCA 72 bp CACTGCTATATTCACGATGCACACGTGACGCATGTATaGTATCTCCGTCACAACCACCCGGGACCACACTGT +
Preference number: 6 (lower is better)
Translates to: HCYIHDAHVTHV*YLRHNHPGPHC
Trigger: ACAGTGTGGTCCCGGGTGGTTGTGACGGAGATATCATACATGCGTCACGTGTGCATCGTGAATATAGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS TCA 72 bp GTCAGAAGGGACACTGCTATATTCACGATGCACACGTaGCGCATGTATGATATCTCCGTCACAACCACCCGG +
Preference number: 6 (lower is better)
Translates to: VRRDTAIFTMHT*RMYDISVTTTR
Trigger: CCGGGTGGTTGTGACGGAGATATCATACATGCGTCACGTGTGCATCGTGAATATAGCAGTGTCCCTTCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CAA 72 bp CACCAGACCATTTACCTGTCTGGGAAGACTCACATTTaGCAAGTGGGCTTCTCTCAGGATAGCCCCCAAGGT +
Preference number: 6 (lower is better)
Translates to: HQTIYLSGKTHI*QVGFSQDSPQG
Trigger: ACCTTGGGGGCTATCCTGAGAGAAGCCCACTTGCAAAATGTGAGTCTTCCCAGACAGGTAAATGGTCTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS TCA 72 bp TCTCCTGGATCTCCCCTCTTGGTCTCAGGACATCCATaGGAAATGGGGCAGCATTTCATCCTTGACGATTCA +
Preference number: 6 (lower is better)
Translates to: SPGSPLLVSGHP*EMGQHFILDDS
Trigger: TGAATCGTCAAGGATGAAATGCTGCCCCATTTCTCATGGATGTCCTGAGACCAAGAGGGGAGATCCAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CCA 72 bp CCATTTACCTGTCTGGGAAGACTCACATTTTGCAAGTaGGCTTCTCTCAGGATAGCCCCCAAGGTTGGGAAA +
Preference number: 6 (lower is better)
Translates to: PFTCLGRLTFCK*ASLRIAPKVGK
Trigger: TTTCCCAACCTTGGGGGCTATCCTGAGAGAAGCCCACTTGCAAAATGTGAGTCTTCCCAGACAGGTAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CCA 72 bp CCCAGTTTGAAATGGCTGCTGTGTCGAGGATGTGGTTaGCCACTTCACTATAGCTCTTCATTTTCTCTCGAG +
Preference number: 6 (lower is better)
Translates to: PSLKWLLCRGCG*PLHYSSSFSLE
Trigger: CTCGAGAGAAAATGAAGAGCTATAGTGAAGTGGCCAACCACATCCTCGACACAGCAGCCATTTCAAACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CCA 72 bp GGGATGCATTTGGCCACAGCTTCCTTAGCTCTTGCCTaGGAATCTGTACCATTCCTAAGATATCTTCTGTGG +
Preference number: 6 (lower is better)
Translates to: GMHLATASLALA*ESVPFLRYLLW
Trigger: CCACAGAAGATATCTTAGGAATGGTACAGATTCCCAGGCAAGAGCTAAGGAAGCTGTGGCCAAATGCATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CCA 72 bp AAGCCAACAGGCCTCAGGTCTCATGTAGCCTTTCTCTaGCTCTGTGATAGCAACTGTAGTGACAGCAATGAT +
Preference number: 6 (lower is better)
Translates to: KPTGLRSHVAFL*LCDSNCSDSND
Trigger: ATCATTGCTGTCACTACAGTTGCTATCACAGAGCCAGAGAAAGGCTACATGAGACCTGAGGCCTGTTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CAA 72 bp GCAGGCATAATCAAAGGGGCAGTTCTTACGGATTCCTaGAGCTACACTCTCAATGGTCTCTGGAGCTCGAAA +
Preference number: 6 (lower is better)
Translates to: AGIIKGAVLTDS*SYTLNGLWSSK
Trigger: TTTCGAGCTCCAGAGACCATTGAGAGTGTAGCTCAAGGAATCCGTAAGAACTGCCCCTTTGATTATGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CAA 90 bp CTGGCAAACAAATTCACTGACTGCAACAAATCCGAGCTGGCATTTTaGTTGGGAATGAAAGCCCAGTTTGAAATGGCTGCTGTGTCGAGG +
Preference number: 6 (lower is better)
Translates to: LANKFTDCNKSELAF*LGMKAQFEMAAVSR
Trigger: CCTCGACACAGCAGCCATTTCAAACTGGGCTTTCATTCCCAACAAAAATGCCAGCTCGGATTTGTTGCAGTCAGTGAATTTGTTTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CAA 90 bp TTGGAGTGCCAGCCAACACACTGGGCTCTGGCATTGCGGGTTTTATaGATCTTTTCGAAGGTGAGTATGATTTCTTGCAACCTTTCTGGT +
Preference number: 6 (lower is better)
Translates to: LECQPTHWALALRVL*IFSKVSMISCNLSG
Trigger: ACCAGAAAGGTTGCAAGAAATCATACTCACCTTCGAAAAGATCAATAAAACCCGCAATGCCAGAGCCCAGTGTGTTGGCTGGCACTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS TCA 72 bp CACTGGTGTAGTTACAGCGGCATTTCACTTCGTTCCTaGTATCCAACATCATTTGGCACGCTTTCTCATCCC +
Preference number: 6 (lower is better)
Translates to: HWCSYSGISLRS*YPTSFGTLSHP
Trigger: GGGATGAGAAAGCGTGCCAAATGATGTTGGATATCAGGAACGAAGTGAAATGCCGCTGTAACTACACCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS GCA 72 bp CTCTCAATGGTCTCTGGAGCTCGAAAGTCTAGAATATaGAGAGGTATAGATGGTGCTGCTACAGAAAGGCGA +
Preference number: 6 (lower is better)
Translates to: LSMVSGARKSRI*RGIDGAATERR
Trigger: TCGCCTTTCTGTAGCAGCACCATCTATACCTCTGCATATTCTAGACTTTCGAGCTCCAGAGACCATTGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS GCA 72 bp CATTGGCAGTCAGAAGGGACACTGCTATATTCACGATaGACACGTGACGCATGTATGATATCTCCGTCACAA +
Preference number: 6 (lower is better)
Translates to: HWQSEGTLLYSR*TRDACMISPSQ
Trigger: TTGTGACGGAGATATCATACATGCGTCACGTGTGCATCGTGAATATAGCAGTGTCCCTTCTGACTGCCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CCA 72 bp GGCAGTTCTTACGGATTCCTTGAGCTACACTCTCAATaGTCTCTGGAGCTCGAAAGTCTAGAATATGCAGAG +
Preference number: 6 (lower is better)
Translates to: GSSYGFLELHSQ*SLELESLEYAE
Trigger: CTCTGCATATTCTAGACTTTCGAGCTCCAGAGACCATTGAGAGTGTAGCTCAAGGAATCCGTAAGAACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CAA 90 bp GGGAACATTCTGTGGACAGAAAGAACACTAAGCAGCAAATCATGGTaGCCTGGGACTTCATTTTCATACATGAGGATCTTCACGGCATCC +
Preference number: 6 (lower is better)
Translates to: GNILWTERTLSSKSW*PGTSFSYMRIFTAS
Trigger: GGATGCCGTGAAGATCCTCATGTATGAAAATGAAGTCCCAGGCAACCATGATTTGCTGCTTAGTGTTCTTTCTGTCCACAGAATGTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283303.3
CDS CAA 90 bp GCAAACAAATTCACTGACTGCAACAAATCCGAGCTGGCATTTTTGTaGGGAATGAAAGCCCAGTTTGAAATGGCTGCTGTGTCGAGGATG +
Preference number: 6 (lower is better)
Translates to: ANKFTDCNKSELAFL*GMKAQFEMAAVSRM
Trigger: CATCCTCGACACAGCAGCCATTTCAAACTGGGCTTTCATTCCCAACAAAAATGCCAGCTCGGATTTGTTGCAGTCAGTGAATTTGTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CCA 72 bp GTAAAACCACTGATAGCACCAGACCATTTACCTGTCTaGGAAGACTCACATTTTGCAAGTGGGCTTCTCTCA +
Preference number: 6 (lower is better)
Translates to: VKPLIAPDHLPV*EDSHFASGLLS
Trigger: TGAGAGAAGCCCACTTGCAAAATGTGAGTCTTCCCAGACAGGTAAATGGTCTGGTGCTATCAGTGGTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CCA 72 bp CGGCATTTCACTTCGTTCCTGATATCCAACATCATTTaGCACGCTTTCTCATCCCATCTCCTTTTCTTGGAG +
Preference number: 6 (lower is better)
Translates to: RHFTSFLISNII*HAFSSHLLFLE
Trigger: CTCCAAGAAAAGGAGATGGGATGAGAAAGCGTGCCAAATGATGTTGGATATCAGGAACGAAGTGAAATGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CAA 72 bp TTCACTGACTGCAACAAATCCGAGCTGGCATTTTTGTaGGGAATGAAAGCCCAGTTTGAAATGGCTGCTGTG +
Preference number: 6 (lower is better)
Translates to: FTDCNKSELAFL*GMKAQFEMAAV
Trigger: CACAGCAGCCATTTCAAACTGGGCTTTCATTCCCAACAAAAATGCCAGCTCGGATTTGTTGCAGTCAGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CAA 72 bp CAGCCAACACACTGGGCTCTGGCATTGCGGGTTTTATaGATCTTTTCGAAGGTGAGTATGATTTCTTGCAAC +
Preference number: 6 (lower is better)
Translates to: QPTHWALALRVL*IFSKVSMISCN
Trigger: GTTGCAAGAAATCATACTCACCTTCGAAAAGATCAATAAAACCCGCAATGCCAGAGCCCAGTGTGTTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CAA 72 bp GCGGCATTTCACTTCGTTCCTGATATCCAACATCATTaGGCACGCTTTCTCATCCCATCTCCTTTTCTTGGA +
Preference number: 6 (lower is better)
Translates to: AAFHFVPDIQHH*ARFLIPSPFLG
Trigger: TCCAAGAAAAGGAGATGGGATGAGAAAGCGTGCCAAATGATGTTGGATATCAGGAACGAAGTGAAATGCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CAA 90 bp GGGAACATTCTGTGGACAGAAAGAACACTAAGCAGCAAATCATGGTaGCCTGGGACTTCATTTTCATACATGAGGATCTTCACCATCACG +
Preference number: 6 (lower is better)
Translates to: GNILWTERTLSSKSW*PGTSFSYMRIFTIT
Trigger: CGTGATGGTGAAGATCCTCATGTATGAAAATGAAGTCCCAGGCAACCATGATTTGCTGCTTAGTGTTCTTTCTGTCCACAGAATGTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327753.7
CDS TCA 72 bp ATTGTGGATGTGGAGTTGTCTGGCAAACAAATTCACTaGCTGCAACAAATCCGAGCTGGCATTTTTGTTGGG +
Preference number: 6 (lower is better)
Translates to: IVDVELSGKQIH*LQQIRAGIFVG
Trigger: CCCAACAAAAATGCCAGCTCGGATTTGTTGCAGTCAGTGAATTTGTTTGCCAGACAACTCCACATCCACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS GCA 72 bp TGGATGTGGAGTTGTCTGGCAAACAAATTCACTGACTaGAACAAATCCGAGCTGGCATTTTTGTTGGGAATG +
Preference number: 6 (lower is better)
Translates to: WMWSCLANKFTD*NKSELAFLLGM
Trigger: CATTCCCAACAAAAATGCCAGCTCGGATTTGTTGCAGTCAGTGAATTTGTTTGCCAGACAACTCCACATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CCA 72 bp GACAGAAAGAACACTAAGCAGCAAATCATGGTTGCCTaGGACTTCATTTTCATACATGAGGATCTTCACGGC +
Preference number: 6 (lower is better)
Translates to: DRKNTKQQIMVA*DFIFIHEDLHG
Trigger: GCCGTGAAGATCCTCATGTATGAAAATGAAGTCCCAGGCAACCATGATTTGCTGCTTAGTGTTCTTTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283303.3
CDS CAA 90 bp GATAATTCAGAAGAAGCATTCCAGAGGCCTGTTGAGGTGCATGGGTaGTATACAGCTGGCACCATAAAGATGTTACAACCTGGTATTCAT +
Preference number: 6 (lower is better)
Translates to: DNSEEAFQRPVEVHG*YTAGTIKMLQPGIH
Trigger: ATGAATACCAGGTTGTAACATCTTTATGGTGCCAGCTGTATACAACCCATGCACCTCAACAGGCCTCTGGAATGCTTCTTCTGAATTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371220.5
CDS TCA 72 bp TTCCAGATGTTGTTTCTGATGATTTCACCATGTCAGTaGTGCAGGCATAATCAAAGGGGCAGTTCTTACGGA +
Preference number: 6 (lower is better)
Translates to: FQMLFLMISPCQ*CRHNQRGSSYG
Trigger: TCCGTAAGAACTGCCCCTTTGATTATGCCTGCATCACTGACATGGTGAAATCATCAGAAACAACATCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS TCA 72 bp GTTAGGGATGTAGCCTGGTTTGTTAACTTGGGCCTTTaGTGGGATGACAAGATAATTCAGAAGAAGCATTCC +
Preference number: 6 (lower is better)
Translates to: VRDVAWFVNLGL*WDDKIIQKKHS
Trigger: GGAATGCTTCTTCTGAATTATCTTGTCATCCCATCAAAGGCCCAAGTTAACAAACCAGGCTACATCCCTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371220.5
CDS CCA 72 bp GTTGTATACAGCTGGCACCATAAAGATGTTACAACCTaGTATTCATCGCTGAGAACAATACCAAACCTACCG +
Preference number: 6 (lower is better)
Translates to: VVYSWHHKDVTT*YSSLRTIPNLP
Trigger: CGGTAGGTTTGGTATTGTTCTCAGCGATGAATACCAGGTTGTAACATCTTTATGGTGCCAGCTGTATACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371220.5
CDS CAA 72 bp CTGTGGACAGAAAGAACACTAAGCAGCAAATCATGGTaGCCTGGGACTTCATTTTCATACATGAGGATCTTC +
Preference number: 6 (lower is better)
Translates to: LWTERTLSSKSW*PGTSFSYMRIF
Trigger: GAAGATCCTCATGTATGAAAATGAAGTCCCAGGCAACCATGATTTGCTGCTTAGTGTTCTTTCTGTCCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000283303.3
ENST00000327753.7
CDS CAA 72 bp AAATTCACTGACTGCAACAAATCCGAGCTGGCATTTTaGTTGGGAATGAAAGCCCAGTTTGAAATGGCTGCT +
Preference number: 6 (lower is better)
Translates to: KFTDCNKSELAF*LGMKAQFEMAA
Trigger: AGCAGCCATTTCAAACTGGGCTTTCATTCCCAACAAAAATGCCAGCTCGGATTTGTTGCAGTCAGTGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CCA 72 bp CAATGTTCTCAGAATTATTGTGGATGTGGAGTTGTCTaGCAAACAAATTCACTGACTGCAACAAATCCGAGC +
Preference number: 6 (lower is better)
Translates to: QCSQNYCGCGVV*QTNSLTATNPS
Trigger: GCTCGGATTTGTTGCAGTCAGTGAATTTGTTTGCCAGACAACTCCACATCCACAATAATTCTGAGAACATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS CCA 72 bp GACAGAAAGAACACTAAGCAGCAAATCATGGTTGCCTaGGACTTCATTTTCATACATGAGGATCTTCACCAT +
Preference number: 6 (lower is better)
Translates to: DRKNTKQQIMVA*DFIFIHEDLHH
Trigger: ATGGTGAAGATCCTCATGTATGAAAATGAAGTCCCAGGCAACCATGATTTGCTGCTTAGTGTTCTTTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327753.7
CDS CAA 90 bp TCTTGCCTGGGAATCTGTACCATTCCTAAGATATCTTCTGTGGTATaGTTCATGCTCATGGAGAAATTGAGGCTTTTCTCTGAGGTATTA +
Preference number: 6 (lower is better)
Translates to: SCLGICTIPKISSVV*FMLMEKLRLFSEVL
Trigger: TAATACCTCAGAGAAAAGCCTCAATTTCTCCATGAGCATGAACAATACCACAGAAGATATCTTAGGAATGGTACAGATTCCCAGGCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5
CDS TCA 72 bp GGCACCATAAAGATGTTACAACCTGGTATTCATCGCTaGGAACAATACCAAACCTACCGCTATTTGGTAAAA +
Preference number: 6 (lower is better)
Translates to: GTIKMLQPGIHR*EQYQTYRYLVK
Trigger: TTTTACCAAATAGCGGTAGGTTTGGTATTGTTCTCAGCGATGAATACCAGGTTGTAACATCTTTATGGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371220.5
CDS TCA 72 bp ATTGTTCATGCTCATGGAGAAATTGAGGCTTTTCTCTaGGGTATTATGGTTGATGTGAAACCCTTTTGTCTG +
Preference number: 6 (lower is better)
Translates to: IVHAHGEIEAFL*GIMVDVKPFCL
Trigger: CAGACAAAAGGGTTTCACATCAACCATAATACCTCAGAGAAAAGCCTCAATTTCTCCATGAGCATGAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000283303.3
ENST00000327753.7
ENST00000371220.5