RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000164393

Ensembl transcript IDs: ENST00000296862.5, ENST00000398742.2, ENST00000467205.6, ENST00000507065.5

Found 430 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGAAGTACAGGGCTGGGAGCCAGCACACTTGGGTTTCTACCTCTaGCTCAGTCCTCGATTAGCATTGACTCACAACTCCAGACTTCCA +
Preference number: 1 (lower is better)
Translates to: EEVQGWEPAHLGFYL*LSPRLALTHNSRLP
Trigger: TGGAAGTCTGGAGTTGTGAGTCAATGCTAATCGAGGACTGAGCCAGAGGTAGAAACCCAAGTGTGCTGGCTCCCAGCCCTGTACTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR GCA 90 bp GAATTCTTGAAGAAGGCAGAAAGTGAGGGAGAGCTCAGGCACACGTaGAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGT +
Preference number: 1 (lower is better)
Translates to: EFLKKAESEGELRHT*SEQIPVMCTLSWPG
Trigger: ACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAGCTCTCCCTCACTTTCTGCCTTCTTCAAGAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR TCA 90 bp AAAGTGAGGGAGAGCTCAGGCACACGTGCAGTGAGCAGATCCCTGTaGTGTGTACTCTTTCCTGGCCAGGTAACTGTGTATTATGACCAC +
Preference number: 1 (lower is better)
Translates to: KVRESSGTRAVSRSL*CVLFPGQVTVYYDH
Trigger: GTGGTCATAATACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAGCTCTCCCTCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR CCA 90 bp AAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTaGGAGCCAGCACACTTGGGTTTCTACCTCTGGCTCAGTCCTCGA +
Preference number: 1 (lower is better)
Translates to: KIFQCLYGLEEEVQG*EPAHLGFYLWLSPR
Trigger: TCGAGGACTGAGCCAGAGGTAGAAACCCAAGTGTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR TCA 90 bp CTCTACCCAGGGTCATCCAGAGTCAACCTAATCCATGCAGTTCCTTaGCATTTTTCAAGATGGTGTAGAGTGGGCTTTGGGATGCAGGAG +
Preference number: 1 (lower is better)
Translates to: LYPGSSRVNLIHAVP*HFSRWCRVGFGMQE
Trigger: CTCCTGCATCCCAAAGCCCACTCTACACCATCTTGAAAAATGTCAAGGAACTGCATGGATTAGGTTGACTCTGGATGACCCTGGGTAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR TCA 90 bp GTGGGGTTTCTTTCCAACCATCCTGTCTCAGGGAGTGAGTATAGCTaGGTAGTGAGTACTTCCATAATAGATGTGACTGCTCAAGACACA +
Preference number: 1 (lower is better)
Translates to: VGFLSNHPVSGSEYS*VVSTSIIDVTAQDT
Trigger: TGTGTCTTGAGCAGTCACATCTATTATGGAAGTACTCACTACTCAGCTATACTCACTCCCTGAGACAGGATGGTTGGAAAGAAACCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR CCA 90 bp TCTCTAAGCATCCTTGGGGTTTCTTGGTTAATGATGAAGCTAAGGTaGGGTTTCTTTCCAACCATCCTGTCTCAGGGAGTGAGTATAGCT +
Preference number: 1 (lower is better)
Translates to: SLSILGVSWLMMKLR*GFFPTILSQGVSIA
Trigger: AGCTATACTCACTCCCTGAGACAGGATGGTTGGAAAGAAACCCCACCTTAGCTTCATCATTAACCAAGAAACCCCAAGGATGCTTAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR TCA 90 bp AAGGTGAGCCCCACTTTCTCCTTTGTAATGAAACGTCATCAATACTaGCTTCTTGTTGGGATAATTAAAGGCTGCCCATTGCCCCTTTGC +
Preference number: 1 (lower is better)
Translates to: KVSPTFSFVMKRHQY*LLVGIIKGCPLPLC
Trigger: GCAAAGGGGCAATGGGCAGCCTTTAATTATCCCAACAAGAAGTCAGTATTGATGACGTTTCATTACAAAGGAGAAAGTGGGGCTCACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR CCA 90 bp TCCAGGAATTCCCAAATAATTCCAGAGTTTTTCTCTAAGCATCCTTaGGGTTTCTTGGTTAATGATGAAGCTAAGGTGGGGTTTCTTTCC +
Preference number: 1 (lower is better)
Translates to: SRNSQIIPEFFSKHP*GFLVNDEAKVGFLS
Trigger: GGAAAGAAACCCCACCTTAGCTTCATCATTAACCAAGAAACCCCAAGGATGCTTAGAGAAAAACTCTGGAATTATTTGGGAATTCCTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR TCA 90 bp TTCATGAAATTCCATTTTCACTTCAATATATGGACTCTGGGTAAGTaGCATCTCTTTGTACCTAAGCCTGCATTGAGGAAAACCAGGACT +
Preference number: 1 (lower is better)
Translates to: FMKFHFHFNIWTLGK*HLFVPKPALRKTRT
Trigger: AGTCCTGGTTTTCCTCAATGCAGGCTTAGGTACAAAGAGATGTCACTTACCCAGAGTCCATATATTGAAGTGAAAATGGAATTTCATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR TCA 90 bp AGCCTATTACTAGGCTGTCTATGGTCTTTAGATCATTTTAGTACTTaGTCCTTTCCCATTCACCATTTAATTTCACTTTCCAAACACCCC +
Preference number: 1 (lower is better)
Translates to: SLLLGCLWSLDHFST*SFPIHHLISLSKHP
Trigger: GGGGTGTTTGGAAAGTGAAATTAAATGGTGAATGGGAAAGGATCAAGTACTAAAATGATCTAAAGACCATAGACAGCCTAGTAATAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
3UTR-3UTR TCA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTCAGAATCCAGCCAGGTaGAATCTCAGGCCGCCTTTT +
Preference number: 2 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFQNPAR*NLRPPF
Trigger: AAAAGGCGGCCTGAGATTTCACCTGGCTGGATTCTG...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAAGCACATTTCTCCTTTaGGCTCTGCCATTCCTCCTA +
Preference number: 2 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPSTFLL*ALPFLL
Trigger: TAGGAGGAATGGCAGAGCCCAAAGGAGAAATGTGCT...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR CAA 90 bp CTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACACTaGGGTTTCTACCTCTGGCTCAGTCCTCGATTAGCATTGACTCAC +
Preference number: 2 (lower is better)
Translates to: LYGLEEEVQGWEPAH*GFYLWLSPRLALTH
Trigger: GTGAGTCAATGCTAATCGAGGACTGAGCCAGAGGTAGAAACCCAAGTGTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp AGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACACTTGGCTTTGTGACTATTCATaGGGCTCCTCCCTCAGCAAC +
Preference number: 2 (lower is better)
Translates to: SVYMVLKRKYRAGSQHTWLCDYS*GSSLSN
Trigger: GTTGCTGAGGGAGGAGCCTCATGAATAGTCACAAAG...CCAAGTGTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp AGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACACTTGGCAGCCCAACTCTTTGTaGCTATTCATGAGGCTCCTC +
Preference number: 2 (lower is better)
Translates to: SVYMVLKRKYRAGSQHTWQPNSL*LFMRLL
Trigger: GAGGAGCCTCATGAATAGTCACAAAGAGTTGGGCTG...CCAAGTGTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCATCTCCTAGAGTCACCTaGCCAAATCACTTTCTTGGT +
Preference number: 2 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPSPRVT*PNHFLG
Trigger: ACCAAGAAAGTGATTTGGTCAGGTGACTCTAGGAGA...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR GCA 90 bp TCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACGCCTTTCATCCTTTCTaGACATCACGCCCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: SFSVYMVLKRKYRAGSQHAFHPF*TSRPPP
Trigger: TGGAGGAGGGCGTGATGTGCAGAAAGGATGAAAGGC...GTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR GCA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTAGCCTTTCATCCTTTCTaGACATCACGCCCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVAFHPF*TSRPPP
Trigger: TGGAGGAGGGCGTGATGTGCAGAAAGGATGAAAGGC...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAACCAAATCACTTTCTTaGTGCGGTGTCAGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPTKSLS*CGVSRK
Trigger: TTTCCTGCTGACACCGCACCAAGAAAGTGATTTGGT...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp TCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACCAGCCCAACTCTTTGTaGCTATTCATGAGGCTCCTC +
Preference number: 2 (lower is better)
Translates to: SFSVYMVLKRKYRAGSQHQPNSL*LFMRLL
Trigger: GAGGAGCCTCATGAATAGTCACAAAGAGTTGGGCTG...GTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCACATTCTCTGATATTCTaGAGCTCCTTTTTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPHSLIF*SSFLQR
Trigger: CCTCTGCAAAAAGGAGCTCCAGAATATCAGAGAATG...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAATGATGAAGCTAAGGTaGGGTTTCTTTCCAACCATC +
Preference number: 2 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPMMKLR*GFFPTI
Trigger: GATGGTTGGAAAGAAACCCCACCTTAGCTTCATCAT...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp CAACTCTTTGTGACTATTCATGAGGCTCCTCCCTCAGCAACACACAGAATCCAGCCGCCTTTTCCAAGATaGGACAGAGGTTGCTTTCTG +
Preference number: 2 (lower is better)
Translates to: QLFVTIHEAPPSATHRIQPPFPR*DRGCFL
Trigger: CAGAAAGCAACCTCTGTCTCATCTTGGAAAAGGCGG...CTGGATTCTGTGTGTTGCTGAGGGAGGAGCCTCATGAATAGTCACAAAGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp AGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGAATCCAGCCAGGTaGAATCTCAGGCCGCCTTTT +
Preference number: 2 (lower is better)
Translates to: RRSFSVYMVLKRKYRAGSQNPAR*NLRPPF
Trigger: AAAAGGCGGCCTGAGATTTCACCTGGCTGGATTCTG...GCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR GCA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTAGGGATAATTAAAGGCTaGCCATTGCCCCTTTGCCTT +
Preference number: 2 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVGIIKG*PLPLCL
Trigger: AAGGCAAAGGGGCAATGGGCAGCCTTTAATTATCCC...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp TCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACAGCACATTTCTCCTTTaGGCTCTGCCATTCCTCCTA +
Preference number: 2 (lower is better)
Translates to: SFSVYMVLKRKYRAGSQHSTFLL*ALPFLL
Trigger: TAGGAGGAATGGCAGAGCCCAAAGGAGAAATGTGCT...GTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp TTCCTTGACATTTTTCAAGATGGTGTAGAGTGGGCTTTGGGATGCAGGAGAGAGCCGCCTTTTCCAAGATaGGACAGAGGTTGCTTTCTG +
Preference number: 2 (lower is better)
Translates to: FLDIFQDGVEWALGCRREPPFPR*DRGCFL
Trigger: CAGAAAGCAACCTCTGTCTCATCTTGGAAAAGGCGG...CTCTCTCCTGCATCCCAAAGCCCACTCTACACCATCTTGAAAAATGTCAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp AGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCTTTGTGACTATTCATaGGGCTCCTCCCTCAGCAAC +
Preference number: 2 (lower is better)
Translates to: RRSFSVYMVLKRKYRAGSLCDYS*GSSLSN
Trigger: GTTGCTGAGGGAGGAGCCTCATGAATAGTCACAAAG...GCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCATTCCATCTCCTTAACTaGAAATGGTCATCTTTCTGT +
Preference number: 2 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPFHLLN*KWSSFC
Trigger: ACAGAAAGATGACCATTTTCAGTTAAGGAGATGGAA...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTATGGACTCTGGGTAAGTaGCATCTCTTTGTACCTAAG +
Preference number: 2 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVWTLGK*HLFVPK
Trigger: CTTAGGTACAAAGAGATGTCACTTACCCAGAGTCCA...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCACTGTTATCTGTGAAATaGAGCAATTGGAGTTCATCT +
Preference number: 2 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPLLSVK*SNWSSS
Trigger: AGATGAACTCCAATTGCTTCATTTCACAGATAACAG...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTAGGGAGTGAGTATAGCTaGGTAGTGAGTACTTCCATA +
Preference number: 2 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVGSEYS*VVSTSI
Trigger: TATGGAAGTACTCACTACTCAGCTATACTCACTCCC...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTTCTTTTTGTTTGCTGTaGCTGCCCAGCATGACATAT +
Preference number: 2 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFSFCLL*LPSMTY
Trigger: ATATGTCATGCTGGGCAGCCACAGCAAACAAAAAGA...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR CAA 90 bp TACATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTaGAAGAGGAAGTACAGGGCTGGGAGCCAGCACACTTGGGTTTCT +
Preference number: 2 (lower is better)
Translates to: YIVSVGRRSFSVYMV*KRKYRAGSQHTWVS
Trigger: AGAAACCCAAGTGTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR CAA 90 bp TATCAGTACCAATTTCTCCTAGAGTCACCTGACCAAATCACTTTCTaGGTGCGGTGTCAGCAGGAAACTGAATGTGTCTCTACCCAGGGT +
Preference number: 2 (lower is better)
Translates to: YQYQFLLESPDQITF*VRCQQETECVSTQG
Trigger: ACCCTGGGTAGAGACACATTCAGTTTCCTGCTGACACCGCACCAAGAAAGTGATTTGGTCAGGTGACTCTAGGAGAAATTGGTACTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTAGAAGAAGCATTCTCTaGTATTCTGGAGCTCCTTTT +
Preference number: 2 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFRRSIL*YSGAPF
Trigger: AAAAGGAGCTCCAGAATATCAGAGAATGCTTCTTCT...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTATTGTTGGTGAGGATTaGCCTTACATTGTCAGTGTA +
Preference number: 2 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFIVGED*PYIVSV
Trigger: TACACTGACAATGTAAGGTCAATCCTCACCAACAAT...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR GCA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTAAAGCTCAACAGATTTTaGTGGCTGATACCCCTAATG +
Preference number: 2 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVKLNRF*WLIPLM
Trigger: CATTAGGGGTATCAGCCAGCAAAATCTGTTGAGCTT...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTACAGAGCTGTTATCTGTaGAATGAAGCAATTGGAGTT +
Preference number: 2 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVQSCYL*NEAIGV
Trigger: AACTCCAATTGCTTCATTTCACAGATAACAGCTCTG...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp AGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCCTGGTTTGTTAACTTaGGCCTTTGATGGGATGACA +
Preference number: 2 (lower is better)
Translates to: RRSFSVYMVLKRKYRAGSPGLLT*AFDGMT
Trigger: TGTCATCCCATCAAAGGCCCAAGTTAACAAACCAGG...GCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTTTTCCCCTTGGTTCATaGCCAAGGAAGTTGTATCTA +
Preference number: 2 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVFPLGS*PRKLYL
Trigger: TAGATACAACTTCCTTGGCCATGAACCAAGGGGAAA...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTGTTAACTTGGGCCTTTaGTGGGATGACAAGATAATT +
Preference number: 2 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVVNLGL*WDDKII
Trigger: AATTATCTTGTCATCCCATCAAAGGCCCAAGTTAAC...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp AGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCATTCTCTGATATTCTaGAGCTCCTTTTTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: RRSFSVYMVLKRKYRAGSHSLIF*SSFLQR
Trigger: CCTCTGCAAAAAGGAGCTCCAGAATATCAGAGAATG...GCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR CAA 90 bp TTGTTTGCTGTGGCTGCCCAGCATGACATATGTAGCTATGTACAGTaGATGGACGAGAAATGTTTAGTAGCACAGAACAGCTTAGACAGA +
Preference number: 2 (lower is better)
Translates to: LFAVAAQHDICSYVQ*MDEKCLVAQNSLDR
Trigger: TCTGTCTAAGCTGTTCTGTGCTACTAAACATTTCTCGTCCATCAACTGTACATAGCTACATATGTCATGCTGGGCAGCCACAGCAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp TTCCTTGACATTTTTCAAGATGGTGTAGAGTGGGCTTTGGGATGCAGGAGAGAGAAAGCATATTGTTGGTaGGGATTGACCTTACATTGT +
Preference number: 2 (lower is better)
Translates to: FLDIFQDGVEWALGCRREKAYCW*GLTLHC
Trigger: ACAATGTAAGGTCAATCCTCACCAACAATATGCTTT...CTCTCTCCTGCATCCCAAAGCCCACTCTACACCATCTTGAAAAATGTCAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTCACTCATACCTAAGGTaGGCCCCACTTTCTCCTTTG +
Preference number: 2 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHAHSYLR*APLSPL
Trigger: CAAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTG...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp CATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAACCTGGTTTGTTAACTTaGGCCTTTGATGGGATGACA +
Preference number: 2 (lower is better)
Translates to: HCQCRQKIFQCLYGLEEEPGLLT*AFDGMT
Trigger: TGTCATCCCATCAAAGGCCCAAGTTAACAAACCAGG...TTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTAAAAAGTGGATATACTaGCAGTGGATTCCTTTTGAA +
Preference number: 2 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVKKWIY*QWIPFE
Trigger: TTCAAAAGGAATCCACTGCCAGTATATCCACTTTTT...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp CATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAACTATGCTTTTCCCCTTaGTTCATGGCCAAGGAAGTT +
Preference number: 2 (lower is better)
Translates to: HCQCRQKIFQCLYGLEEELCFSP*FMAKEV
Trigger: AACTTCCTTGGCCATGAACCAAGGGGAAAAGCATAG...TTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp TTCCTTGACATTTTTCAAGATGGTGTAGAGTGGGCTTTGGGATGCAGGAGAGAGTCAATATATGGACTCTaGGTAAGTGACATCTCTTTG +
Preference number: 2 (lower is better)
Translates to: FLDIFQDGVEWALGCRRESIYGL*VSDISL
Trigger: CAAAGAGATGTCACTTACCCAGAGTCCATATATTGA...CTCTCTCCTGCATCCCAAAGCCCACTCTACACCATCTTGAAAAATGTCAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR GCA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTTGCCCATTGCCCCTTTaGCTTCATCCACTAGTTAGA +
Preference number: 2 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHACPLPL*LHPLVR
Trigger: TCTAACTAGTGGATGAAGGCAAAGGGGCAATGGGCA...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTTCTCCTAGAGTCACCTaGCCAAATCACTTTCTTGGT +
Preference number: 2 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHASPRVT*PNHFLG
Trigger: ACCAAGAAAGTGATTTGGTCAGGTGACTCTAGGAGA...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTCTATGCTTTTCCCCTTaGTTCATGGCCAAGGAAGTT +
Preference number: 2 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHALCFSP*FMAKEV
Trigger: AACTTCCTTGGCCATGAACCAAGGGGAAAAGCATAG...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTTTATGCATGGGGTCATaGCTGTGTGTTTGCTTGTGT +
Preference number: 2 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHALCMGS*LCVCLC
Trigger: ACACAAGCAAACACACAGCCATGACCCCATGCATAA...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR CAA 90 bp CCTCTCTCCCTAGTGCTCAGAGCTGTTATCTGTGAAATGAAGCAATaGGAGTTCATCTTTTATAAAATTTGTCCAGAGTTACCATCCTAT +
Preference number: 2 (lower is better)
Translates to: PLSLVLRAVICEMKQ*EFIFYKICPELPSY
Trigger: ATAGGATGGTAACTCTGGACAAATTTTATAAAAGATGAACTCCAATTGCTTCATTTCACAGATAACAGCTCTGAGCACTAGGGAGAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTGGGCCTTTGATGGGATaGCAAGATAATTCAGAAGAA +
Preference number: 2 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHAGPLMG*QDNSEE
Trigger: TTCTTCTGAATTATCTTGTCATCCCATCAAAGGCCC...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTGGGAGTGAGTATAGCTaGGTAGTGAGTACTTCCATA +
Preference number: 2 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFGSEYS*VVSTSI
Trigger: TATGGAAGTACTCACTACTCAGCTATACTCACTCCC...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTGTTAGGGATGTAGCCTaGTTTGTTAACTTGGGCCTT +
Preference number: 2 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFVRDVA*FVNLGL
Trigger: AAGGCCCAAGTTAACAAACCAGGCTACATCCCTAAC...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTTTTCCCCTTGGTTCATaGCCAAGGAAGTTGTATCTA +
Preference number: 2 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHAFPLGS*PRKLYL
Trigger: TAGATACAACTTCCTTGGCCATGAACCAAGGGGAAA...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTCTCAACAGATTTTGCTaGCTGATACCCCTAATGTTG +
Preference number: 2 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHALNRFC*LIPLML
Trigger: CAACATTAGGGGTATCAGCCAGCAAAATCTGTTGAG...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTGGGCCTTTGATGGGATaGCAAGATAATTCAGAAGAA +
Preference number: 2 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFGPLMG*QDNSEE
Trigger: TTCTTCTGAATTATCTTGTCATCCCATCAAAGGCCC...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTATCCATGCAGTTCCTTaGCATTTTTCAAGATGGTGT +
Preference number: 2 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHAIHAVP*HFSRWC
Trigger: ACACCATCTTGAAAAATGTCAAGGAACTGCATGGAT...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR GCA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGTTTCCCCACTCCATATaGTATTCCAAATCCATTGGC +
Preference number: 2 (lower is better)
Translates to: LNMEWYAAIREIFMHNELFPHSI*YSKSIG
Trigger: GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAA...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
3UTR-3UTR CCA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTTCTTTTTGTTTGCTGTaGCTGCCCAGCATGACATAT +
Preference number: 2 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFSFCLL*LPSMTY
Trigger: ATATGTCATGCTGGGCAGCCACAGCAAACAAAAAGA...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTATCCTTGGGGTTTCTTaGTTAATGATGAAGCTAAGG +
Preference number: 2 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHAILGVS*LMMKLR
Trigger: CCTTAGCTTCATCATTAACCAAGAAACCCCAAGGAT...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR CAA 90 bp TTCAATGGTAAGCTCAACAGATTTTGCTGGCTGATACCCCTAATGTaGAACAGACCAAATCAAATGCTTAACTCTTTAATTTGGAAGTCA +
Preference number: 2 (lower is better)
Translates to: FNGKLNRFCWLIPLM*NRPNQMLNSLIWKS
Trigger: TGACTTCCAAATTAAAGAGTTAAGCATTTGATTTGGTCTGTTCAACATTAGGGGTATCAGCCAGCAAAATCTGTTGAGCTTACCATTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTGTTAACTTGGGCCTTTaGTGGGATGACAAGATAATT +
Preference number: 2 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFVNLGL*WDDKII
Trigger: AATTATCTTGTCATCCCATCAAAGGCCCAAGTTAAC...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTCAGAGCTGTTATCTGTaGAATGAAGCAATTGGAGTT +
Preference number: 2 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFQSCYL*NEAIGV
Trigger: AACTCCAATTGCTTCATTTCACAGATAACAGCTCTG...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTTTCCATCTCCTTAACTaGAAATGGTCATCTTTCTGT +
Preference number: 2 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFFHLLN*KWSSFC
Trigger: ACAGAAAGATGACCATTTTCAGTTAAGGAGATGGAA...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR TCA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTTCTGAATTGGAAATGTaGTATTTCCTCTCTCCAATC +
Preference number: 2 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFSELEM*YFLSPI
Trigger: GATTGGAGAGAGGAAATATCACATTTCCAATTCAGA...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR GCA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTAGTCAACCTAATCCATaGAGTTCCTTGACATTTTTC +
Preference number: 2 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFSQPNP*SSLTFF
Trigger: GAAAAATGTCAAGGAACTGCATGGATTAGGTTGACT...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR GCA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTCATAATAGATGTGACTaGTCAAGACACAAAGCAAAT +
Preference number: 2 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFHNRCD*SRHKAN
Trigger: ATTTGCTTTGTGTCTTGAGCAGTCACATCTATTATG...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CCA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTAAAAAGTGGATATACTaGCAGTGGATTCCTTTTGAA +
Preference number: 2 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFKKWIY*QWIPFE
Trigger: TTCAAAAGGAATCCACTGCCAGTATATCCACTTTTT...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR CCA 72 bp CAGGGCTGGGAGCCAGCACACTTGGGTTTCTACCTCTaGCTCAGTCCTCGATTAGCATTGACTCACAACTCC +
Preference number: 3 (lower is better)
Translates to: QGWEPAHLGFYL*LSPRLALTHNS
Trigger: GGAGTTGTGAGTCAATGCTAATCGAGGACTGAGCCAGAGGTAGAAACCCAAGTGTGCTGGCTCCCAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CAA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCACCTTTGTCTTTTTGTTaGCTGTGGCTGCCCAGCATG +
Preference number: 3 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPPLSFC*LWLPSM
Trigger: CATGCTGGGCAGCCACAGCAAACAAAAAGACAAAGG...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR TCA 72 bp GAGAGCTCAGGCACACGTGCAGTGAGCAGATCCCTGTaGTGTGTACTCTTTCCTGGCCAGGTAACTGTGTAT +
Preference number: 3 (lower is better)
Translates to: ESSGTRAVSRSL*CVLFPGQVTVY
Trigger: ATACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR GCA 72 bp AAGAAGGCAGAAAGTGAGGGAGAGCTCAGGCACACGTaGAGTGAGCAGATCCCTGTGATGTGTACTCTTTCC +
Preference number: 3 (lower is better)
Translates to: KKAESEGELRHT*SEQIPVMCTLS
Trigger: GGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAGCTCTCCCTCACTTTCTGCCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CAA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCACAACAAAAACCACGGTaGTGGCCCCCTTTGTCTTTT +
Preference number: 3 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPQQKPR*WPPLSF
Trigger: AAAAGACAAAGGGGGCCACAACCGTGGTTTTTGTTG...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CAA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTCCTTTGTCTTTTTGTTaGCTGTGGCTGCCCAGCATG +
Preference number: 3 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFPLSFC*LWLPSM
Trigger: CATGCTGGGCAGCCACAGCAAACAAAAAGACAAAGG...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CAA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAAGTCCTCGATTAGCATaGACTCACAACTCCAGACTT +
Preference number: 3 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPSPRLA*THNSRL
Trigger: AAGTCTGGAGTTGTGAGTCAATGCTAATCGAGGACT...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CAA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTATTAAAGGCTGCCCATaGCCCCTTTGCCTTCATCCA +
Preference number: 3 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFIKGCP*PLCLHP
Trigger: TGGATGAAGGCAAAGGGGCAATGGGCAGCCTTTAAT...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CAA 90 bp CAACTCTTTGTGACTATTCATGAGGCTCCTCCCTCAGCAACACACAGAATCCAGCGGTTGTGGCCCCCTTaGTCTTTTTGTTTGCTGTGG +
Preference number: 3 (lower is better)
Translates to: QLFVTIHEAPPSATHRIQRLWPP*SFCLLW
Trigger: CCACAGCAAACAAAAAGACAAAGGGGGCCACAACCG...CTGGATTCTGTGTGTTGCTGAGGGAGGAGCCTCATGAATAGTCACAAAGAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CAA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTAGACCAAATCACTTTCTaGGTGCGGTGTCAGCAGGAA +
Preference number: 3 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVDQITF*VRCQQE
Trigger: TTCCTGCTGACACCGCACCAAGAAAGTGATTTGGTC...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CAA 90 bp TTCCTTGACATTTTTCAAGATGGTGTAGAGTGGGCTTTGGGATGCAGGAGAGAGCAACAAAAACCACGGTaGTGGCCCCCTTTGTCTTTT +
Preference number: 3 (lower is better)
Translates to: FLDIFQDGVEWALGCRREQQKPR*WPPLSF
Trigger: AAAAGACAAAGGGGGCCACAACCGTGGTTTTTGTTG...CTCTCTCCTGCATCCCAAAGCCCACTCTACACCATCTTGAAAAATGTCAAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR TCA 72 bp GGGTCATCCAGAGTCAACCTAATCCATGCAGTTCCTTaGCATTTTTCAAGATGGTGTAGAGTGGGCTTTGGG +
Preference number: 3 (lower is better)
Translates to: GSSRVNLIHAVP*HFSRWCRVGFG
Trigger: CCCAAAGCCCACTCTACACCATCTTGAAAAATGTCAAGGAACTGCATGGATTAGGTTGACTCTGGATGACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR GCA 72 bp CCATTGCCCCTTTGCCTTCATCCACTAGTTAGATGCTaGTGCAGTCATCTATGTCCTTGCTTTGTAAAGAGG +
Preference number: 3 (lower is better)
Translates to: PLPLCLHPLVRC*CSHLCPCFVKR
Trigger: CCTCTTTACAAAGCAAGGACATAGATGACTGCAGCAGCATCTAACTAGTGGATGAAGGCAAAGGGGCAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR GCA 72 bp CTTGTTGGGATAATTAAAGGCTGCCCATTGCCCCTTTaGCTTCATCCACTAGTTAGATGCTGCTGCAGTCAT +
Preference number: 3 (lower is better)
Translates to: LVGIIKGCPLPL*LHPLVRCCCSH
Trigger: ATGACTGCAGCAGCATCTAACTAGTGGATGAAGGCAAAGGGGCAATGGGCAGCCTTTAATTATCCCAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CAA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTTGTAGCTATGTACAGTaGATGGACGAGAAATGTTTA +
Preference number: 3 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFCSYVQ*MDEKCL
Trigger: TAAACATTTCTCGTCCATCAACTGTACATAGCTACA...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR TCA 72 bp TGGGTAAGTGACATCTCTTTGTACCTAAGCCTGCATTaGGGAAAACCAGGACTATGTCTATCTCACCCCTTC +
Preference number: 3 (lower is better)
Translates to: WVSDISLYLSLH*GKPGLCLSHPF
Trigger: GAAGGGGTGAGATAGACATAGTCCTGGTTTTCCTCAATGCAGGCTTAGGTACAAAGAGATGTCACTTACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR TCA 72 bp TGGATACTATCAGTACCAATTTCTCCTAGAGTCACCTaGCCAAATCACTTTCTTGGTGCGGTGTCAGCAGGA +
Preference number: 3 (lower is better)
Translates to: WILSVPISPRVT*PNHFLGAVSAG
Trigger: TCCTGCTGACACCGCACCAAGAAAGTGATTTGGTCAGGTGACTCTAGGAGAAATTGGTACTGATAGTATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR TCA 72 bp CTTTCCAACCATCCTGTCTCAGGGAGTGAGTATAGCTaGGTAGTGAGTACTTCCATAATAGATGTGACTGCT +
Preference number: 3 (lower is better)
Translates to: LSNHPVSGSEYS*VVSTSIIDVTA
Trigger: AGCAGTCACATCTATTATGGAAGTACTCACTACTCAGCTATACTCACTCCCTGAGACAGGATGGTTGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CAA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTCAGTCATCTATGTCCTaGCTTTGTAAAGAGGTTTTT +
Preference number: 3 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVQSSMS*LCKEVF
Trigger: AAAAACCTCTTTACAAAGCAAGGACATAGATGACTG...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CAA 90 bp TTCCTTGACATTTTTCAAGATGGTGTAGAGTGGGCTTTGGGATGCAGGAGAGAGTGTAGCTATGTACAGTaGATGGACGAGAAATGTTTA +
Preference number: 3 (lower is better)
Translates to: FLDIFQDGVEWALGCRRECSYVQ*MDEKCL
Trigger: TAAACATTTCTCGTCCATCAACTGTACATAGCTACA...CTCTCTCCTGCATCCCAAAGCCCACTCTACACCATCTTGAAAAATGTCAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR TCA 72 bp GTTAGGGATGTAGCCTGGTTTGTTAACTTGGGCCTTTaGTGGGATGACAAGATAATTCAGAAGAAGCATTCT +
Preference number: 3 (lower is better)
Translates to: VRDVAWFVNLGL*WDDKIIQKKHS
Trigger: AGAATGCTTCTTCTGAATTATCTTGTCATCCCATCAAAGGCCCAAGTTAACAAACCAGGCTACATCCCTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR CCA 72 bp TCCCAAATAATTCCAGAGTTTTTCTCTAAGCATCCTTaGGGTTTCTTGGTTAATGATGAAGCTAAGGTGGGG +
Preference number: 3 (lower is better)
Translates to: SQIIPEFFSKHP*GFLVNDEAKVG
Trigger: CCCCACCTTAGCTTCATCATTAACCAAGAAACCCCAAGGATGCTTAGAGAAAAACTCTGGAATTATTTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CAA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTATTAAAGGCTGCCCATaGCCCCTTTGCCTTCATCCA +
Preference number: 3 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFIKGCP*PLCLHP
Trigger: TGGATGAAGGCAAAGGGGCAATGGGCAGCCTTTAAT...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CAA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTTCTATGCTTTTCCCCTaGGTTCATGGCCAAGGAAGT +
Preference number: 3 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFSMLFP*VHGQGS
Trigger: ACTTCCTTGGCCATGAACCAAGGGGAAAAGCATAGA...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CAA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTCATCCTTGGGGTTTCTaGGTTAATGATGAAGCTAAG +
Preference number: 3 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHAHPWGF*VNDEAK
Trigger: CTTAGCTTCATCATTAACCAAGAAACCCCAAGGATG...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR TCA 72 bp TTCCATTTTCACTTCAATATATGGACTCTGGGTAAGTaGCATCTCTTTGTACCTAAGCCTGCATTGAGGAAA +
Preference number: 3 (lower is better)
Translates to: FHFHFNIWTLGK*HLFVPKPALRK
Trigger: TTTCCTCAATGCAGGCTTAGGTACAAAGAGATGTCACTTACCCAGAGTCCATATATTGAAGTGAAAATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR-3UTR CAA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTATCTCACCCCTTCTCTaGAAAAGAACATACAAATCT +
Preference number: 3 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFISPLL*KRTYKS
Trigger: AGATTTGTATGTTCTTTTCAAGAGAAGGGGTGAGAT...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
CDS-3UTR CCA 90 bp GAACAGCTTAGACAGAGGAGCCTTTCATCCTTTCTGCACATCACGCCCTCCTCCCACGATGGCCAAAGCTaGGATCACGAAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: EQLRQRSLSSFLHITPSSHDGQS*DHEGQE
Trigger: CTCCTGGCCTTCGTGATCCCAGCTTTGGCCATCGTG...GGAGGAGGGCGTGATGTGCAGAAAGGATGAAAGGCTCCTCTGTCTAAGCTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCACCACTCCCTGGCAGCTaGAGATATGGGCATTACTGG +
Preference number: 4 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPPLPGS*RYGHYW
Trigger: CCAGTAATGCCCATATCTCCAGCTGCCAGGGAGTGG...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
3UTR CAA 72 bp CTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACACTaGGGTTTCTACCTCTGGCTCAGTCCTCGATTAGCA +
Preference number: 4 (lower is better)
Translates to: LEEEVQGWEPAH*GFYLWLSPRLA
Trigger: TGCTAATCGAGGACTGAGCCAGAGGTAGAAACCCAAGTGTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
CDS-3UTR TCA 90 bp GAACAGCTTAGACAGAGGAGCCTTTCATCCTTTCTGCACATCACGCCCTCCTCCGCATCCATAGCCCACTaGAAACAGAGATGCCACCAG +
Preference number: 4 (lower is better)
Translates to: EQLRQRSLSSFLHITPSSASIAH*KQRCHQ
Trigger: CTGGTGGCATCTCTGTTTTCAGTGGGCTATGGATGC...GGAGGAGGGCGTGATGTGCAGAAAGGATGAAAGGCTCCTCTGTCTAAGCTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGTCGTAGATAGCCTTTaGCAGGTTCAGTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPVVDSL*QVQWQQ
Trigger: TTGCTGCCACTGAACCTGGCAAAGGCTATCTACGAC...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTAATACACCGTGTGGCCTaGCAGGCACCTTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVIHRVA*QAPSPC
Trigger: GCAAGGAGAAGGTGCCTGCCAGGCCACACGGTGTAT...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCATCTGGCAGGTGTCAGTaGTCTTGTGCCATGTCTTTT +
Preference number: 4 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPSGRCQ*SCAMSF
Trigger: AAAAGACATGGCACAAGATCACTGACACCTGCCAGA...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGTGTCTATATGGTCTTaGAGAGGAAGTACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPVSIWS*RGSTGL
Trigger: CAGCCCTGTACTTCCTCTTCAAGACCATATAGACAC...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTGTGTCAGCAGGAAACTaGATGTGTCTCTACCCAGGG +
Preference number: 4 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFVSAGN*MCLYPG
Trigger: CCCTGGGTAGAGACACATTCAGTTTCCTGCTGACAC...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCATGCTTGGCCTACATTTaGAAACAGCTTGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPCLAYI*KQLAGS
Trigger: ACTCCCAGCAAGCTGTTTGCAAATGTAGGCCAAGCA...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCACTTCAGCCAAACTTATaGATGGGGTCATGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPLQPNL*MGSWLC
Trigger: ACACAGCCATGACCCCATGCATAAGTTTGGCTGAAG...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTGAGCTCAGGCACACGTaGAGTGAGCAGATCCCTGTG +
Preference number: 4 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVELRHT*SEQIPV
Trigger: CACAGGGATCTGCTCACTGCACGTGTGCCTGAGCTC...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAAGGGCATTAAGAGTCTaGCAGGTGTCAGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPRALRV*QVSVIL
Trigger: CAAGATCACTGACACCTGCCAGACTCTTAATGCCCT...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp GAACAGCTTAGACAGAGGAGCCTTTCATCCTTTCTGCACATCACGCCCTCCTCCTACGGCAATGTTTCCTaGTATCCAGGGAGACTGCTG +
Preference number: 4 (lower is better)
Translates to: EQLRQRSLSSFLHITPSSYGNVS*YPGRLL
Trigger: CAGCAGTCTCCCTGGATACCAGGAAACATTGCCGTA...GGAGGAGGGCGTGATGTGCAGAAAGGATGAAAGGCTCCTCTGTCTAAGCTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAAGACTAGGACCTCAATaGACAAGCAAAGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPRLGPQ*TSKGSG
Trigger: GCCTGATCCTTTGCTTGTCCATTGAGGTCCTAGTCT...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp TCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACATTTGCCCCACTCCCTaGCAGCTGGAGATATGGGCA +
Preference number: 4 (lower is better)
Translates to: SFSVYMVLKRKYRAGSQHICPTP*QLEIWA
Trigger: TGCCCATATCTCCAGCTGCCAGGGAGTGGGGCAAAT...GTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTACAGAATCCAGCCAGGTaGAATCTCAGGCCGCCTTTT +
Preference number: 4 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVQNPAR*NLRPPF
Trigger: AAAAGGCGGCCTGAGATTTCACCTGGCTGGATTCTG...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTCAGCCCAACTCTTTGTaGCTATTCATGAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFQPNSL*LFMRLL
Trigger: GAGGAGCCTCATGAATAGTCACAAAGAGTTGGGCTG...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp TCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACGTGAGCAGATCCCTGTaGTGTGTACTCTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SFSVYMVLKRKYRAGSQHVSRSL*CVLFPG
Trigger: GCCAGGAAAGAGTACACATCACAGGGATCTGCTCAC...GTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAATAGAGGATAAGGAGTaGCTTGGCAAGCATCCAGAA +
Preference number: 4 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPIEDKE*LGKHPE
Trigger: TTCTGGATGCTTGCCAAGGCACTCCTTATCCTCTAT...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp CAACTCTTTGTGACTATTCATGAGGCTCCTCCCTCAGCAACACACAGAATCCAGCCTGGAACATGGAATTaGCAATGGCAGCTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: QLFVTIHEAPPSATHRIQPGTWN*QWQLAG
Trigger: CCCAGCGAGCTGCCATTGGCAATTCCATGTTCCAGG...CTGGATTCTGTGTGTTGCTGAGGGAGGAGCCTCATGAATAGTCACAAAGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTGCCACACATCCCTTGTaGTGTGTTATTGGGCCACTA +
Preference number: 4 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFATHPL*CVIGPL
Trigger: TAGTGGCCCAATAACACACCACAAGGGATGTGTGGC...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCACTATGCTTTTCCCCTTaGTTCATGGCCAAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPLCFSP*FMAKEV
Trigger: AACTTCCTTGGCCATGAACCAAGGGGAAAAGCATAG...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCATTATGCATGGGGTCATaGCTGTGTGTTTGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPLCMGS*LCVCLC
Trigger: ACACAAGCAAACACACAGCCATGACCCCATGCATAA...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp CAACTCTTTGTGACTATTCATGAGGCTCCTCCCTCAGCAACACACAGAATCCAGAGATGCCACCAGGACTaGCTTGGGCAAGGTATGGAA +
Preference number: 4 (lower is better)
Translates to: QLFVTIHEAPPSATHRIQRCHQD*LGQGME
Trigger: TTCCATACCTTGCCCAAGTCAGTCCTGGTGGCATCT...CTGGATTCTGTGTGTTGCTGAGGGAGGAGCCTCATGAATAGTCACAAAGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp TCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACGGGATCTGTCATCGATaGCAGTGGCTACTCCAAATC +
Preference number: 4 (lower is better)
Translates to: SFSVYMVLKRKYRAGSQHGICHR*QWLLQI
Trigger: GATTTGGAGTAGCCACTGTCATCGATGACAGATCCC...GTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCATTCCAAACACTAGGATaGAGAAACCCTGGAATGCAT +
Preference number: 4 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPFQTLG*RNPGMH
Trigger: ATGCATTCCAGGGTTTCTTCATCCTAGTGTTTGGAA...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGGCCTTTGATGGGATaGCAAGATAATTCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPGPLMG*QDNSEE
Trigger: TTCTTCTGAATTATCTTGTCATCCCATCAAAGGCCC...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp GAACAGCTTAGACAGAGGAGCCTTTCATCCTTTCTGCACATCACGCCCTCCTCCTCTCCTAGAGTCACCTaGCCAAATCACTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: EQLRQRSLSSFLHITPSSSPRVT*PNHFLG
Trigger: ACCAAGAAAGTGATTTGGTCAGGTGACTCTAGGAGA...GGAGGAGGGCGTGATGTGCAGAAAGGATGAAAGGCTCCTCTGTCTAAGCTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp CAACTCTTTGTGACTATTCATGAGGCTCCTCCCTCAGCAACACACAGAATCCAGGCCTTTCATCCTTTCTaGACATCACGCCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QLFVTIHEAPPSATHRIQAFHPF*TSRPPP
Trigger: TGGAGGAGGGCGTGATGTGCAGAAAGGATGAAAGGC...CTGGATTCTGTGTGTTGCTGAGGGAGGAGCCTCATGAATAGTCACAAAGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp AGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACACTTGGATTTCCCTGAGTGTCTaGAGGGCAAGGTTGAGTACA +
Preference number: 4 (lower is better)
Translates to: SVYMVLKRKYRAGSQHTWISLSV*RARLST
Trigger: TGTACTCAACCTTGCCCTCCAGACACTCAGGGAAAT...CCAAGTGTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp AGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACACTTGGTCACTTCCTGGAACATaGAATTGCCAATGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SVYMVLKRKYRAGSQHTWSLPGT*NCQWQL
Trigger: GAGCTGCCATTGGCAATTCCATGTTCCAGGAAGTGA...CCAAGTGTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTCCAGGCCTACATATGTaGTGTAAGTCAGAATCAGAC +
Preference number: 4 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFPGLHM*CKSESD
Trigger: GTCTGATTCTGACTTACATCACATATGTAGGCCTGG...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTATGGCGATGTTCTTGCTaGTTCTCACAATGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVWRCSC*FSQWLS
Trigger: TGAGAGCCATTGTGAGAATCAGCAAGAACATCGCCA...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAAGAAGAAGCATTCTCTaGTATTCTGGAGCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPRRSIL*YSGAPF
Trigger: AAAAGGAGCTCCAGAATATCAGAGAATGCTTCTTCT...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp AGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACACTTGGTACCTAAGCCTGCATTaGGGAAAACCAGGACTATGT +
Preference number: 4 (lower is better)
Translates to: SVYMVLKRKYRAGSQHTWYLSLH*GKPGLC
Trigger: ACATAGTCCTGGTTTTCCTCAATGCAGGCTTAGGTA...CCAAGTGTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp AGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACACTTGGTGGACTCTGGGTAAGTaGCATCTCTTTGTACCTAAG +
Preference number: 4 (lower is better)
Translates to: SVYMVLKRKYRAGSQHTWWTLGK*HLFVPK
Trigger: CTTAGGTACAAAGAGATGTCACTTACCCAGAGTCCA...CCAAGTGTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp AGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACACTTGGGGGAGTGAGTATAGCTaGGTAGTGAGTACTTCCATA +
Preference number: 4 (lower is better)
Translates to: SVYMVLKRKYRAGSQHTWGSEYS*VVSTSI
Trigger: TATGGAAGTACTCACTACTCAGCTATACTCACTCCC...CCAAGTGTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp AGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACACTTGGGTGTCAGTGATCTTGTaGCATGTCTTTTGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: SVYMVLKRKYRAGSQHTWVSVIL*HVFCLH
Trigger: ATGCAGGCAAAAGACATGGCACAAGATCACTGACAC...CCAAGTGTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTATCATTTTGCAGGCCTaGTGGTCCCATCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVIILQA*WSHLFS
Trigger: GGAGAACAGATGGGACCAGCAGGCCTGCAAAATGAT...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTCCTTCTCCTTGCTTTTaGTTGCAGCCTGATACAATG +
Preference number: 4 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFPSPCF*LQPDTM
Trigger: CATTGTATCAGGCTGCAAGCAAAAGCAAGGAGAAGG...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTCAGGCACCTTCTCCTTaGTTTTGCTTGCAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVQAPSP*FCLQPD
Trigger: ATCAGGCTGCAAGCAAAAGCAAGGAGAAGGTGCCTG...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCCAAGTTAGCCCCGAATaGCAGCTCCCCAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGQVSPE*QLPRLD
Trigger: GTCCAGCCTGGGGAGCTGCCATTCGGGGCTAACTTG...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp TCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACTCTGTCTTTGTCACTTaGCTCCAGACTAGGACCTCA +
Preference number: 4 (lower is better)
Translates to: SFSVYMVLKRKYRAGSQHSVFVT*LQTRTS
Trigger: TGAGGTCCTAGTCTGGAGCCAAGTGACAAAGACAGA...GTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGACTTGGGCAAGGTATaGAAAACAATCATGATTCCA +
Preference number: 4 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPDLGKV*KTIMIP
Trigger: TGGAATCATGATTGTTTTCCATACCTTGCCCAAGTC...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp AGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCCAATGGCAGCTCGCTaGGTCTTGACAATCACCAGT +
Preference number: 4 (lower is better)
Translates to: RRSFSVYMVLKRKYRAGSPMAAR*VLTITS
Trigger: ACTGGTGATTGTCAAGACCCAGCGAGCTGCCATTGG...GCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTATGGCTCTCACTTCCTaGAACATGGAATTGCCAATG +
Preference number: 4 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFMALTS*NMELPM
Trigger: CATTGGCAATTCCATGTTCCAGGAAGTGAGAGCCAT...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTAAGGATGAAGAAACCCTaGAATGCATTGAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVRMKKP*NALSRE
Trigger: CTCCCTGCTCAATGCATTCCAGGGTTTCTTCATCCT...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTGTTAGGGATGTAGCCTaGTTTGTTAACTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFVRDVA*FVNLGL
Trigger: AAGGCCCAAGTTAACAAACCAGGCTACATCCCTAAC...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTGAGAATCAGCGCTTCTaGTTGGACCAATCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVENQRF*LDQSGK
Trigger: CTTCCCTGATTGGTCCAACCAGAAGCGCTGATTCTC...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
3UTR CAA 72 bp AGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTaGAAGAGGAAGTACAGGGCTGGGAGCCAGCACACT +
Preference number: 4 (lower is better)
Translates to: SVGRRSFSVYMV*KRKYRAGSQHT
Trigger: AGTGTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
CDS-3UTR TCA 90 bp TCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACTTGTCTTCAAATGGCTaGACCAAACGTGAATCCTCC +
Preference number: 4 (lower is better)
Translates to: SFSVYMVLKRKYRAGSQHLSSNG*TKRESS
Trigger: GGAGGATTCACGTTTGGTTCAGCCATTTGAAGACAA...GTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp GAACAGCTTAGACAGAGGAGCCTTTCATCCTTTCTGCACATCACGCCCTCCTCCCAGGATGTTTATCTATaGATAGCCTTCTTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: EQLRQRSLSSFLHITPSSQDVYL*IAFLQR
Trigger: CCTTTGCAAGAAGGCTATTCATAGATAAACATCCTG...GGAGGAGGGCGTGATGTGCAGAAAGGATGAAAGGCTCCTCTGTCTAAGCTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTGAAAGGAAGCCACAATaGACCACACATCTGCCATCA +
Preference number: 4 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVERKPQ*TTHLPS
Trigger: TGATGGCAGATGTGTGGTTCATTGTGGCTTCCTTTC...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTAGTAACTCTGCATCTTTaGCTCATCAACACCTGTCCA +
Preference number: 4 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVVTLHL*LINTCP
Trigger: TGGACAGGTGTTGATGAGGCAAAGATGCAGAGTTAC...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTATGTGGTTGGCTATGGTaGTGTAACTCTGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVCGWLW*CNSASL
Trigger: CAAAGATGCAGAGTTACAGCACCATAGCCAACCACA...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTCATCAGCAAAGTGGCTaGAATGTTAACAATGCACAC +
Preference number: 4 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFHQQSG*NVNNAH
Trigger: GTGTGCATTGTTAACATTGCAGCCACTTTGCTGATG...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp CAACTCTTTGTGACTATTCATGAGGCTCCTCCCTCAGCAACACACAGAATCCAGAATGAACCACACATCTaGCATCAGCAAAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QLFVTIHEAPPSATHRIQNEPHI*HQQSGC
Trigger: GCAGCCACTTTGCTGATGGCAGATGTGTGGTTCATT...CTGGATTCTGTGTGTTGCTGAGGGAGGAGCCTCATGAATAGTCACAAAGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTGGGATAATTAAAGGCTaGCCATTGCCCCTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVGIIKG*PLPLCL
Trigger: AAGGCAAAGGGGCAATGGGCAGCCTTTAATTATCCC...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCCCCCATGTGCAGGAGTaGTGCAGCCTGACAGACAAG +
Preference number: 4 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGPHVQE*CSLTDK
Trigger: CTTGTCTGTCAGGCTGCAGCACTCCTGCACATGGGG...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCATACACCGTGTGGCCTaGCAGGCACCTTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGIHRVA*QAPSPC
Trigger: GCAAGGAGAAGGTGCCTGCCAGGCCACACGGTGTAT...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp CAACTCTTTGTGACTATTCATGAGGCTCCTCCCTCAGCAACACACAGAATCCAGAGGGAGAAGATAATGTaGAAGGCCAGGGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: QLFVTIHEAPPSATHRIQREKIM*KARDLS
Trigger: TGACAGATCCCTGGCCTTCCACATTATCTTCTCCCT...CTGGATTCTGTGTGTTGCTGAGGGAGGAGCCTCATGAATAGTCACAAAGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTATGATGAAGCTAAGGTaGGGTTTCTTTCCAACCATC +
Preference number: 4 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFMMKLR*GFFPTI
Trigger: GATGGTTGGAAAGAAACCCCACCTTAGCTTCATCAT...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp CATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTCCCAGAAGTGGTGTaGGGATGGCGATGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: HCQCRQKIFQCLYGLEEEVPEVV*GWRCSC
Trigger: GCAAGAACATCGCCATCCTCACACCACTTCTGGGAC...TTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTTCAGGGAAGAATTCTTaGAGAAGGCAGAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVSGKNS*RRQKVR
Trigger: CCTCACTTTCTGCCTTCTTCAAGAATTCTTCCCTGA...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCCCCAGGCTGGACCCTaGGGTTCCCATAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: ERCLIHLSVIREERRNYLPQAGP*GSHRQS
Trigger: TGACTGCCTATGGGAACCGCAGGGTCCAGCCTGGGG...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR GCA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCCCTGGAACATGGAATTaGCAATGGCAGCTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGPGTWN*QWQLAG
Trigger: CCCAGCGAGCTGCCATTGGCAATTCCATGTTCCAGG...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR GCA 90 bp CATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAATCTCTACGGCAAATTTaGCCCACTCCCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HCQCRQKIFQCLYGLEEESLRQI*PTPWQL
Trigger: CAGCTGCCAGGGAGTGGGGCAAATTTGCCGTAGAGA...TTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTCTCCTTGCTTTTGCTTaGAGCCTGATACAATGTCCT +
Preference number: 4 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVLLAFA*SLIQCP
Trigger: AGGACATTGTATCAGGCTGCAAGCAAAAGCAAGGAG...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp TTCCTTGACATTTTTCAAGATGGTGTAGAGTGGGCTTTGGGATGCAGGAGAGAGTCTGGAGCTCCTTTTTaGAGAGGCTACTCAACCCTT +
Preference number: 4 (lower is better)
Translates to: FLDIFQDGVEWALGCRRESGAPF*RGYSTL
Trigger: AAGGGTTGAGTAGCCTCTGCAAAAAGGAGCTCCAGA...CTCTCTCCTGCATCCCAAAGCCCACTCTACACCATCTTGAAAAATGTCAAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp AGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCCACCAGGACTGACTTaGGCAAGGTATGGAAAACAA +
Preference number: 4 (lower is better)
Translates to: RRSFSVYMVLKRKYRAGSPPGLT*ARYGKQ
Trigger: TTGTTTTCCATACCTTGCCCAAGTCAGTCCTGGTGG...GCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTAAGATATGGGCATTACTaGCTCTCTTCTGTCATACCT +
Preference number: 4 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVRYGHY*LSSVIP
Trigger: AGGTATGACAGAAGAGAGCCAGTAATGCCCATATCT...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp TCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACGGCTTCTCTTATCTTTaGATCCAGGATGGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SFSVYMVLKRKYRAGSQHGFSYL*IQDGSK
Trigger: TTTGGAACCATCCTGGATCCAAAGATAAGAGAAGCC...GTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTATCCTTGGGGTTTCTTaGTTAATGATGAAGCTAAGG +
Preference number: 4 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFILGVS*LMMKLR
Trigger: CCTTAGCTTCATCATTAACCAAGAAACCCCAAGGAT...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp AGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCTGTTTCTGTCAGGAATaGAAGTCCAGTTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: RRSFSVYMVLKRKYRAGSCFCQE*KSSWRC
Trigger: GCATCTCCAACTGGACTTTCATTCCTGACAGAAACA...GCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp TTCCTTGACATTTTTCAAGATGGTGTAGAGTGGGCTTTGGGATGCAGGAGAGAGTCAACACTCTCCCAGTaGCTTCATTGCTGGTATCAT +
Preference number: 4 (lower is better)
Translates to: FLDIFQDGVEWALGCRRESTLSQ*LHCWYH
Trigger: ATGATACCAGCAATGAAGTCACTGGGAGAGTGTTGA...CTCTCTCCTGCATCCCAAAGCCCACTCTACACCATCTTGAAAAATGTCAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp CAACTCTTTGTGACTATTCATGAGGCTCCTCCCTCAGCAACACACAGAATCCAGCATGGCGTAAATAGGTaGTCTCTGTCTTTGTCACTT +
Preference number: 4 (lower is better)
Translates to: QLFVTIHEAPPSATHRIQHGVNR*SLSLSL
Trigger: AAGTGACAAAGACAGAGATCACCTATTTACGCCATG...CTGGATTCTGTGTGTTGCTGAGGGAGGAGCCTCATGAATAGTCACAAAGAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCAGATGCCACCAGGACTaGCTTGGGCAAGGTATGGAA +
Preference number: 4 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGRCHQD*LGQGME
Trigger: TTCCATACCTTGCCCAAGTCAGTCCTGGTGGCATCT...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTAGTTAACTTGGGCCTTTaGTGGGATGACAAGATAATT +
Preference number: 4 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVVNLGL*WDDKII
Trigger: AATTATCTTGTCATCCCATCAAAGGCCCAAGTTAAC...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp AGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACACTTGGCTGTTATCTGTGAAATaGAGCAATTGGAGTTCATCT +
Preference number: 4 (lower is better)
Translates to: SVYMVLKRKYRAGSQHTWLLSVK*SNWSSS
Trigger: AGATGAACTCCAATTGCTTCATTTCACAGATAACAG...CCAAGTGTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTCAGGCACACGTGCAGTaGGCAGATCCCTGTGATGTG +
Preference number: 4 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHAQAHVQ*ADPCDV
Trigger: CACATCACAGGGATCTGCTCACTGCACGTGTGCCTG...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTATGTTGTGTAAGAGCTaGACAATTACGGCAATGTTT +
Preference number: 4 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFMLCKS*TITAMF
Trigger: AAACATTGCCGTAATTGTGCAGCTCTTACACAACAT...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp AGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCGAAGAAACCCTGGAATaGATTGAGCAGGGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RRSFSVYMVLKRKYRAGSEETLE*IEQGED
Trigger: ATCTTCTCCCTGCTCAATGCATTCCAGGGTTTCTTC...GCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp AGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCGAATGTGGTTGGCTATaGTGCTGTAACTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: RRSFSVYMVLKRKYRAGSECGWL*CCNSAS
Trigger: AGATGCAGAGTTACAGCACCATAGCCAACCACATTC...GCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp TCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACAATAGCCCCAATAGTTaGAAATGCAATGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: SFSVYMVLKRKYRAGSQHNSPNS*KCNADD
Trigger: GTCATCAGCATTGCATTTCCAACTATTGGGGCTATT...GTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTCATTCTCTGATATTCTaGAGCTCCTTTTTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVHSLIF*SSFLQR
Trigger: CCTCTGCAAAAAGGAGCTCCAGAATATCAGAGAATG...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp CAACTCTTTGTGACTATTCATGAGGCTCCTCCCTCAGCAACACACAGAATCCAGTCTTTTTGTTTGCTGTaGCTGCCCAGCATGACATAT +
Preference number: 4 (lower is better)
Translates to: QLFVTIHEAPPSATHRIQSFCLL*LPSMTY
Trigger: ATATGTCATGCTGGGCAGCCACAGCAAACAAAAAGA...CTGGATTCTGTGTGTTGCTGAGGGAGGAGCCTCATGAATAGTCACAAAGAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp CAACTCTTTGTGACTATTCATGAGGCTCCTCCCTCAGCAACACACAGAATCCAGTTTCCCCTTGGTTCATaGCCAAGGAAGTTGTATCTA +
Preference number: 4 (lower is better)
Translates to: QLFVTIHEAPPSATHRIQFPLGS*PRKLYL
Trigger: TAGATACAACTTCCTTGGCCATGAACCAAGGGGAAA...CTGGATTCTGTGTGTTGCTGAGGGAGGAGCCTCATGAATAGTCACAAAGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTGAGGAAGTACAGGGCTaGGAGCCAGCACACTTGGGT +
Preference number: 4 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHAEEVQG*EPAHLG
Trigger: ACCCAAGTGTGCTGGCTCCCAGCCCTGTACTTCCTC...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp CAACTCTTTGTGACTATTCATGAGGCTCCTCCCTCAGCAACACACAGAATCCAGCTCAACAGATTTTGCTaGCTGATACCCCTAATGTTG +
Preference number: 4 (lower is better)
Translates to: QLFVTIHEAPPSATHRIQLNRFC*LIPLML
Trigger: CAACATTAGGGGTATCAGCCAGCAAAATCTGTTGAG...CTGGATTCTGTGTGTTGCTGAGGGAGGAGCCTCATGAATAGTCACAAAGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467205.6
3UTR CAA 72 bp GTGGCTGCCCAGCATGACATATGTAGCTATGTACAGTaGATGGACGAGAAATGTTTAGTAGCACAGAACAGC +
Preference number: 4 (lower is better)
Translates to: VAAQHDICSYVQ*MDEKCLVAQNS
Trigger: GCTGTTCTGTGCTACTAAACATTTCTCGTCCATCAACTGTACATAGCTACATATGTCATGCTGGGCAGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
3UTR CAA 72 bp CAATTTCTCCTAGAGTCACCTGACCAAATCACTTTCTaGGTGCGGTGTCAGCAGGAAACTGAATGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: QFLLESPDQITF*VRCQQETECVS
Trigger: AGAGACACATTCAGTTTCCTGCTGACACCGCACCAAGAAAGTGATTTGGTCAGGTGACTCTAGGAGAAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
CDS-3UTR TCA 90 bp TTCCTTGACATTTTTCAAGATGGTGTAGAGTGGGCTTTGGGATGCAGGAGAGAGGTGGTGCCCATAGTATaGATGAAGACATCTGATATG +
Preference number: 4 (lower is better)
Translates to: FLDIFQDGVEWALGCRREVVPIV*MKTSDM
Trigger: CATATCAGATGTCTTCATTCATACTATGGGCACCAC...CTCTCTCCTGCATCCCAAAGCCCACTCTACACCATCTTGAAAAATGTCAAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTAAAAGCATATTGTTGGTaGGGATTGACCTTACATTGT +
Preference number: 4 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVKAYCW*GLTLHC
Trigger: ACAATGTAAGGTCAATCCTCACCAACAATATGCTTT...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp CATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAACACTCATACCTAAGGTaGGCCCCACTTTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: HCQCRQKIFQCLYGLEEEHSYLR*APLSPL
Trigger: CAAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTG...TTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTAGGAGTGCTGCAGCCTaGCAGACAAGTCCTGCATGG +
Preference number: 4 (lower is better)
Translates to: ERCLIHLSVIREERRNYLRSAAA*QTSPAW
Trigger: CCATGCAGGACTTGTCTGTCAGGCTGCAGCACTCCT...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR GCA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTACTCACCGGCAAATTTaGCCCACTCCCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ERCLIHLSVIREERRNYLTHRQI*PTPWQL
Trigger: CAGCTGCCAGGGAGTGGGGCAAATTTGCCGGTGAGT...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp TCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACGCAACATATCTGTTATaGTCTCAGACTTTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: SFSVYMVLKRKYRAGSQHATYLL*SQTFQY
Trigger: ATACTGGAAAGTCTGAGACCATAACAGATATGTTGC...GTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGCACGATGGCCAAAGCTaGGATCACGAAGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LNMEWYAAIREIFMHNELHDGQS*DHEGQE
Trigger: CTCCTGGCCTTCGTGATCCCAGCTTTGGCCATCGTG...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp CATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGGTTTACTACCACGATaGCCAAAGCTGGGATCACGA +
Preference number: 4 (lower is better)
Translates to: HCQCRQKIFQCLYGLEEEGLLPR*PKLGSR
Trigger: TCGTGATCCCAGCTTTGGCCATCGTGGTAGTAAACC...TTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCGGTTTACTACCACGATaGCCAAAGCTGGGATCACGA +
Preference number: 4 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGGLLPR*PKLGSR
Trigger: TCGTGATCCCAGCTTTGGCCATCGTGGTAGTAAACC...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTCTGGGCCGGGCGCGATaGTTCATATCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHALGRAR*FISVIP
Trigger: TGGGATTACAGATATGAACCATCGCGCCCGGCCCAG...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp AGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCTTCTTGCAAAGGAGTTaGCTGAATGTAGCAGGATAT +
Preference number: 4 (lower is better)
Translates to: RRSFSVYMVLKRKYRAGSFLQRS*LNVAGY
Trigger: ATATCCTGCTACATTCAGTCAACTCCTTTGCAAGAA...GCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp AGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCTCTCCTCTGACTTGCTaGTCTTTTCAAAAATCAGTG +
Preference number: 4 (lower is better)
Translates to: RRSFSVYMVLKRKYRAGSSPLTC*SFQKSV
Trigger: CACTGATTTTTGAAAAGATCAGCAAGTCAGAGGAGA...GCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp TTCCTTGACATTTTTCAAGATGGTGTAGAGTGGGCTTTGGGATGCAGGAGAGAGAGACTCTCTAAGATGTaGGGTGACATAAGAATTGAG +
Preference number: 4 (lower is better)
Translates to: FLDIFQDGVEWALGCRRERLSKM*GDIRIE
Trigger: CTCAATTCTTATGTCACCTCACATCTTAGAGAGTCT...CTCTCTCCTGCATCCCAAAGCCCACTCTACACCATCTTGAAAAATGTCAAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCGAAAGGAAGCCACAATaGACCACACATCTGCCATCA +
Preference number: 4 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGERKPQ*TTHLPS
Trigger: TGATGGCAGATGTGTGGTTCATTGTGGCTTCCTTTC...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTGTCCCAGAAGTGGTGTaGGGATGGCGATGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: ERCLIHLSVIREERRNYLVPEVV*GWRCSC
Trigger: GCAAGAACATCGCCATCCTCACACCACTTCTGGGAC...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTTCTGAATTGGAAATGTaGTATTTCCTCTCTCCAATC +
Preference number: 4 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVSELEM*YFLSPI
Trigger: GATTGGAGAGAGGAAATATCACATTTCCAATTCAGA...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp CATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAATGCCCATTGCCCCTTTaGCTTCATCCACTAGTTAGA +
Preference number: 4 (lower is better)
Translates to: HCQCRQKIFQCLYGLEEECPLPL*LHPLVR
Trigger: TCTAACTAGTGGATGAAGGCAAAGGGGCAATGGGCA...TTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTAGTCAACCTAATCCATaGAGTTCCTTGACATTTTTC +
Preference number: 4 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVSQPNP*SSLTFF
Trigger: GAAAAATGTCAAGGAACTGCATGGATTAGGTTGACT...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCATGTGCAGGAGTGCTaGAGCCTGACAGACAAGTCC +
Preference number: 4 (lower is better)
Translates to: ERCLIHLSVIREERRNYLHVQEC*SLTDKS
Trigger: GGACTTGTCTGTCAGGCTGCAGCACTCCTGCACATG...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCAGACTAGGACCTCAATaGACAAGCAAAGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGRLGPQ*TSKGSG
Trigger: GCCTGATCCTTTGCTTGTCCATTGAGGTCCTAGTCT...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCCCACCAGGACTGACTTaGGCAAGGTATGGAAAACAA +
Preference number: 4 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGPPGLT*ARYGKQ
Trigger: TTGTTTTCCATACCTTGCCCAAGTCAGTCCTGGTGG...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCCACTCCCTGGCAGCTaGAGATATGGGCATTACTGG +
Preference number: 4 (lower is better)
Translates to: ERCLIHLSVIREERRNYLPLPGS*RYGHYW
Trigger: CCAGTAATGCCCATATCTCCAGCTGCCAGGGAGTGG...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGATTTGCCCCACTCCCTaGCAGCTGGAGATATGGGCA +
Preference number: 4 (lower is better)
Translates to: LNMEWYAAIREIFMHNELICPTP*QLEIWA
Trigger: TGCCCATATCTCCAGCTGCCAGGGAGTGGGGCAAAT...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTTCAATATATGGACTCTaGGTAAGTGACATCTCTTTG +
Preference number: 4 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVSIYGL*VSDISL
Trigger: CAAAGAGATGTCACTTACCCAGAGTCCATATATTGA...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
3UTR CAA 72 bp CTCTATGCTTTTCCCCTTGGTTCATGGCCAAGGAAGTaGTATCTAAGCCTAAACCAAGTTGACAATCCAATC +
Preference number: 4 (lower is better)
Translates to: LYAFPLGSWPRK*YLSLNQVDNPI
Trigger: GATTGGATTGTCAACTTGGTTTAGGCTTAGATACAACTTCCTTGGCCATGAACCAAGGGGAAAAGCATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
CDS-3UTR TCA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCTGTTTCTGTCAGGAATaGAAGTCCAGTTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGCFCQE*KSSWRC
Trigger: GCATCTCCAACTGGACTTTCATTCCTGACAGAAACA...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp TTAGTAAATGAAAGAGTCAGGATCCAAATCCAGGTATCTCTGGAACAAAAGTTTGCATCCATAGCCCACTaGAAACAGAGATGCCACCAG +
Preference number: 4 (lower is better)
Translates to: LVNERVRIQIQVSLEQKFASIAH*KQRCHQ
Trigger: CTGGTGGCATCTCTGTTTTCAGTGGGCTATGGATGC...AAACTTTTGTTCCAGAGATACCTGGATTTGGATCCTGACTCTTTCATTTACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp AGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCTTCCATCTCCTTAACTaGAAATGGTCATCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: RRSFSVYMVLKRKYRAGSFHLLN*KWSSFC
Trigger: ACAGAAAGATGACCATTTTCAGTTAAGGAGATGGAA...GCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCGTAACTCTGCATCTTTaGCTCATCAACACCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGVTLHL*LINTCP
Trigger: TGGACAGGTGTTGATGAGGCAAAGATGCAGAGTTAC...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR GCA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCCCTTCTCCTTGCTTTTaGTTGCAGCCTGATACAATG +
Preference number: 4 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGPSPCF*LQPDTM
Trigger: CATTGTATCAGGCTGCAAGCAAAAGCAAGGAGAAGG...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR GCA 90 bp CATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAAAATCACTTTCTTGGTaGGGTGTCAGCAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: HCQCRQKIFQCLYGLEEEKSLSW*GVSRKL
Trigger: CAGTTTCCTGCTGACACCGCACCAAGAAAGTGATTT...TTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCACCAATGGCAGCTCGCTaGGTCTTGACAATCACCAGT +
Preference number: 4 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSPMAAR*VLTITS
Trigger: ACTGGTGATTGTCAAGACCCAGCGAGCTGCCATTGG...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp CAACTCTTTGTGACTATTCATGAGGCTCCTCCCTCAGCAACACACAGAATCCAGAAAAAGTGGATATACTaGCAGTGGATTCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: QLFVTIHEAPPSATHRIQKKWIY*QWIPFE
Trigger: TTCAAAAGGAATCCACTGCCAGTATATCCACTTTTT...CTGGATTCTGTGTGTTGCTGAGGGAGGAGCCTCATGAATAGTCACAAAGAGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp CATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAACCAAATCACTTTCTTaGTGCGGTGTCAGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: HCQCRQKIFQCLYGLEEETKSLS*CGVSRK
Trigger: TTTCCTGCTGACACCGCACCAAGAAAGTGATTTGGT...TTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTGGGATCTGTCATCGATaGCAGTGGCTACTCCAAATC +
Preference number: 4 (lower is better)
Translates to: ERCLIHLSVIREERRNYLGICHR*QWLLQI
Trigger: GATTTGGAGTAGCCACTGTCATCGATGACAGATCCC...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCGGCAAAGCATACACATaGAACTGTGAACGTTGCTTA +
Preference number: 4 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGGKAYT*NCERCL
Trigger: TAAGCAACGTTCACAGTTTCATGTGTATGCTTTGCC...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR GCA 90 bp TTAGTAAATGAAAGAGTCAGGATCCAAATCCAGGTATCTCTGGAACAAAAGTTTATCATTTTGCAGGCCTaGTGGTCCCATCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LVNERVRIQIQVSLEQKFIILQA*WSHLFS
Trigger: GGAGAACAGATGGGACCAGCAGGCCTGCAAAATGAT...AAACTTTTGTTCCAGAGATACCTGGATTTGGATCCTGACTCTTTCATTTACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR GCA 90 bp TTAGTAAATGAAAGAGTCAGGATCCAAATCCAGGTATCTCTGGAACAAAAGTTTGTCGTAGATAGCCTTTaGCAGGTTCAGTGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LVNERVRIQIQVSLEQKFVVDSL*QVQWQQ
Trigger: TTGCTGCCACTGAACCTGGCAAAGGCTATCTACGAC...AAACTTTTGTTCCAGAGATACCTGGATTTGGATCCTGACTCTTTCATTTACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR GCA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCACAGGCACCTTCTCCTTaGTTTTGCTTGCAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSQAPSP*FCLQPD
Trigger: ATCAGGCTGCAAGCAAAAGCAAGGAGAAGGTGCCTG...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR GCA 90 bp CATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAACATCCACTAGTTAGATaGTGCTGCAGTCATCTATGT +
Preference number: 4 (lower is better)
Translates to: HCQCRQKIFQCLYGLEEEHPLVR*CCSHLC
Trigger: ACATAGATGACTGCAGCAGCATCTAACTAGTGGATG...TTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTGGCTGGGCTCTTGTATaGATGAGAGTCAAGTTAGCC +
Preference number: 4 (lower is better)
Translates to: ERCLIHLSVIREERRNYLGWALV*MRVKLA
Trigger: GGCTAACTTGACTCTCATCCATACAAGAGCCCAGCC...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCCACAAGACAGATCTGTaGGACACTTTTGTAGCAACA +
Preference number: 4 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGHKTDL*DTFVAT
Trigger: TGTTGCTACAAAAGTGTCCCACAGATCTGTCTTGTG...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCATACGGCAATGTTTCCTaGTATCCAGGGAGACTGCTG +
Preference number: 4 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSYGNVS*YPGRLL
Trigger: CAGCAGTCTCCCTGGATACCAGGAAACATTGCCGTA...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGGCCACACATCCCTTGTaGTGTGTTATTGGGCCACTA +
Preference number: 4 (lower is better)
Translates to: LNMEWYAAIREIFMHNELATHPL*CVIGPL
Trigger: TAGTGGCCCAATAACACACCACAAGGGATGTGTGGC...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCAGCATCTGGACTTACCTaGAATGCATTGAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSASGLT*NALSRE
Trigger: CTCCCTGCTCAATGCATTCCAGGTAAGTCCAGATGC...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGTCTGGCAGGTGTCAGTaGTCTTGTGCCATGTCTTTT +
Preference number: 4 (lower is better)
Translates to: LNMEWYAAIREIFMHNELSGRCQ*SCAMSF
Trigger: AAAAGACATGGCACAAGATCACTGACACCTGCCAGA...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTTGGCTGAACCAAACGTaGATCCTCCTCAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHAWLNQT*ILLKDV
Trigger: AACATCTTTGAGGAGGATTCACGTTTGGTTCAGCCA...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp TTAGTAAATGAAAGAGTCAGGATCCAAATCCAGGTATCTCTGGAACAAAAGTTTTGGCGATGTTCTTGCTaGTTCTCACAATGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LVNERVRIQIQVSLEQKFWRCSC*FSQWLS
Trigger: TGAGAGCCATTGTGAGAATCAGCAAGAACATCGCCA...AAACTTTTGTTCCAGAGATACCTGGATTTGGATCCTGACTCTTTCATTTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp CATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAACAGAGCTGTTATCTGTaGAATGAAGCAATTGGAGTT +
Preference number: 4 (lower is better)
Translates to: HCQCRQKIFQCLYGLEEEQSCYL*NEAIGV
Trigger: AACTCCAATTGCTTCATTTCACAGATAACAGCTCTG...TTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp CATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAATCCATGCAGTTCCTTaGCATTTTTCAAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: HCQCRQKIFQCLYGLEEEIHAVP*HFSRWC
Trigger: ACACCATCTTGAAAAATGTCAAGGAACTGCATGGAT...TTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGTGCTTGGCCTACATTTaGAAACAGCTTGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: LNMEWYAAIREIFMHNELCLAYI*KQLAGS
Trigger: ACTCCCAGCAAGCTGTTTGCAAATGTAGGCCAAGCA...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR GCA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGAATGAACCACACATCTaGCATCAGCAAAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LNMEWYAAIREIFMHNELNEPHI*HQQSGC
Trigger: GCAGCCACTTTGCTGATGGCAGATGTGTGGTTCATT...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCAATTTCCCTGAGTGTCTaGAGGGCAAGGTTGAGTACA +
Preference number: 4 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSISLSV*RARLST
Trigger: TGTACTCAACCTTGCCCTCCAGACACTCAGGGAAAT...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp TTAGTAAATGAAAGAGTCAGGATCCAAATCCAGGTATCTCTGGAACAAAAGTTTAGGGCATTAAGAGTCTaGCAGGTGTCAGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: LVNERVRIQIQVSLEQKFRALRV*QVSVIL
Trigger: CAAGATCACTGACACCTGCCAGACTCTTAATGCCCT...AAACTTTTGTTCCAGAGATACCTGGATTTGGATCCTGACTCTTTCATTTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp TTAGTAAATGAAAGAGTCAGGATCCAAATCCAGGTATCTCTGGAACAAAAGTTTTCTGTCTTTGTCACTTaGCTCCAGACTAGGACCTCA +
Preference number: 4 (lower is better)
Translates to: LVNERVRIQIQVSLEQKFSVFVT*LQTRTS
Trigger: TGAGGTCCTAGTCTGGAGCCAAGTGACAAAGACAGA...AAACTTTTGTTCCAGAGATACCTGGATTTGGATCCTGACTCTTTCATTTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCATCACTTCCTGGAACATaGAATTGCCAATGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSSLPGT*NCQWQL
Trigger: GAGCTGCCATTGGCAATTCCATGTTCCAGGAAGTGA...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTAGGGAGAAGATAATGTaGAAGGCCAGGGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: ERCLIHLSVIREERRNYLREKIM*KARDLS
Trigger: TGACAGATCCCTGGCCTTCCACATTATCTTCTCCCT...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTTTACAGGAAATCAGGTaGGGAGAATCAGCGCTTCTG +
Preference number: 4 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFLQEIR*GESALL
Trigger: CAGAAGCGCTGATTCTCCCCACCTGATTTCCTGTAA...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR TCA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTTGGCTGAACCAAACGTaGATCCTCCTCAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: ERCLIHLSVIREERRNYLWLNQT*ILLKDV
Trigger: AACATCTTTGAGGAGGATTCACGTTTGGTTCAGCCA...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCATCAACACTCTCCCAGTaGCTTCATTGCTGGTATCAT +
Preference number: 4 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSSTLSQ*LHCWYH
Trigger: ATGATACCAGCAATGAAGTCACTGGGAGAGTGTTGA...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCCAGGCCTACATATGTaGTGTAAGTCAGAATCAGAC +
Preference number: 4 (lower is better)
Translates to: ERCLIHLSVIREERRNYLPGLHM*CKSESD
Trigger: GTCTGATTCTGACTTACATCACATATGTAGGCCTGG...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR GCA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGGTGTCAGTGATCTTGTaGCATGTCTTTTGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: LNMEWYAAIREIFMHNELVSVIL*HVFCLH
Trigger: ATGCAGGCAAAAGACATGGCACAAGATCACTGACAC...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR GCA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCATGTGGTTGGCTATGGTaGTGTAACTCTGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSCGWLW*CNSASL
Trigger: CAAAGATGCAGAGTTACAGCACCATAGCCAACCACA...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR GCA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTATAGAGGATAAGGAGTaGCTTGGCAAGCATCCAGAA +
Preference number: 4 (lower is better)
Translates to: ERCLIHLSVIREERRNYLIEDKE*LGKHPE
Trigger: TTCTGGATGCTTGCCAAGGCACTCCTTATCCTCTAT...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR GCA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCACTCCTTGCTTTTGCTTaGAGCCTGATACAATGTCCT +
Preference number: 4 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSLLAFA*SLIQCP
Trigger: AGGACATTGTATCAGGCTGCAAGCAAAAGCAAGGAG...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR GCA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGTCTTCTGTCATACCTTaGTACAAATCACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LNMEWYAAIREIFMHNELSSVIP*YKSQAG
Trigger: CCCAGCCTGTGATTTGTAGCAAGGTATGACAGAAGA...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp TTAGTAAATGAAAGAGTCAGGATCCAAATCCAGGTATCTCTGGAACAAAAGTTTCTACAAATCACAGGCTaGGCTCTTGTATGGATGAGA +
Preference number: 4 (lower is better)
Translates to: LVNERVRIQIQVSLEQKFLQITG*ALVWMR
Trigger: TCTCATCCATACAAGAGCCCAGCCTGTGATTTGTAG...AAACTTTTGTTCCAGAGATACCTGGATTTGGATCCTGACTCTTTCATTTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCAGAATGTGGTTGGCTATaGTGCTGTAACTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSECGWL*CCNSAS
Trigger: AGATGCAGAGTTACAGCACCATAGCCAACCACATTC...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCAATGGCTCTCACTTCCTaGAACATGGAATTGCCAATG +
Preference number: 4 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSMALTS*NMELPM
Trigger: CATTGGCAATTCCATGTTCCAGGAAGTGAGAGCCAT...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp TTAGTAAATGAAAGAGTCAGGATCCAAATCCAGGTATCTCTGGAACAAAAGTTTCTCTCACTTTGCACTTaGTCAGAAGCATCTGGACTT +
Preference number: 4 (lower is better)
Translates to: LVNERVRIQIQVSLEQKFLSLCT*SEASGL
Trigger: AAGTCCAGATGCTTCTGACCAAGTGCAAAGTGAGAG...AAACTTTTGTTCCAGAGATACCTGGATTTGGATCCTGACTCTTTCATTTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp CATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAATTCTCTAAGCATCCTTaGGGTTTCTTGGTTAATGAT +
Preference number: 4 (lower is better)
Translates to: HCQCRQKIFQCLYGLEEEFSKHP*GFLVND
Trigger: ATCATTAACCAAGAAACCCCAAGGATGCTTAGAGAA...TTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGTTCTTGTTTTGTGGCTaGCCAAAGACAAACTCACCG +
Preference number: 4 (lower is better)
Translates to: LNMEWYAAIREIFMHNELFLFCG*PKTNSP
Trigger: CGGTGAGTTTGTCTTTGGCCAGCCACAAAACAAGAA...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp TTAGTAAATGAAAGAGTCAGGATCCAAATCCAGGTATCTCTGGAACAAAAGTTTGTGGTGCCCATAGTATaGATGAAGACATCTGATATG +
Preference number: 4 (lower is better)
Translates to: LVNERVRIQIQVSLEQKFVVPIV*MKTSDM
Trigger: CATATCAGATGTCTTCATTCATACTATGGGCACCAC...AAACTTTTGTTCCAGAGATACCTGGATTTGGATCCTGACTCTTTCATTTACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCACATGGCGTAAATAGGTaGTCTCTGTCTTTGTCACTT +
Preference number: 4 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSHGVNR*SLSLSL
Trigger: AAGTGACAAAGACAGAGATCACCTATTTACGCCATG...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTATTGTTGGTGAGGATTaGCCTTACATTGTCAGTGTA +
Preference number: 4 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHAIVGED*PYIVSV
Trigger: TACACTGACAATGTAAGGTCAATCCTCACCAACAAT...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGCATCAGCAAAGTGGCTaGAATGTTAACAATGCACAC +
Preference number: 4 (lower is better)
Translates to: LNMEWYAAIREIFMHNELHQQSG*NVNNAH
Trigger: GTGTGCATTGTTAACATTGCAGCCACTTTGCTGATG...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR GCA 90 bp CATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAACATAATAGATGTGACTaGTCAAGACACAAAGCAAAT +
Preference number: 4 (lower is better)
Translates to: HCQCRQKIFQCLYGLEEEHNRCD*SRHKAN
Trigger: ATTTGCTTTGTGTCTTGAGCAGTCACATCTATTATG...TTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR GCA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTTTTCCCCACTCCATATaGTATTCCAAATCCATTGGC +
Preference number: 4 (lower is better)
Translates to: ERCLIHLSVIREERRNYLFPHSI*YSKSIG
Trigger: GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAA...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTCACAAGACAGATCTGTaGGACACTTTTGTAGCAACA +
Preference number: 4 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFHKTDL*DTFVAT
Trigger: TGTTGCTACAAAAGTGTCCCACAGATCTGTCTTGTG...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp TTAGTAAATGAAAGAGTCAGGATCCAAATCCAGGTATCTCTGGAACAAAAGTTTTTGGTCAGAAGCATCTaGACTTACCTGGAATGCATT +
Preference number: 4 (lower is better)
Translates to: LVNERVRIQIQVSLEQKFLVRSI*TYLECI
Trigger: AATGCATTCCAGGTAAGTCCAGATGCTTCTGACCAA...AAACTTTTGTTCCAGAGATACCTGGATTTGGATCCTGACTCTTTCATTTACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCAAGATATGGGCATTACTaGCTCTCTTCTGTCATACCT +
Preference number: 4 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSRYGHY*LSSVIP
Trigger: AGGTATGACAGAAGAGAGCCAGTAATGCCCATATCT...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTATGTGTACTCTTTCCTaGCCAGGTAACTGTGTATTA +
Preference number: 4 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHAMCTLS*PGNCVL
Trigger: TAATACACAGTTACCTGGCCAGGAAAGAGTACACAT...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp TTAGTAAATGAAAGAGTCAGGATCCAAATCCAGGTATCTCTGGAACAAAAGTTTGACTTTCTTGTTTTGTaGCTGGCCAAAGACAAACTC +
Preference number: 4 (lower is better)
Translates to: LVNERVRIQIQVSLEQKFDFLVL*LAKDKL
Trigger: GAGTTTGTCTTTGGCCAGCCACAAAACAAGAAAGTC...AAACTTTTGTTCCAGAGATACCTGGATTTGGATCCTGACTCTTTCATTTACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTTTCTTGCAAAGGAGTTaGCTGAATGTAGCAGGATAT +
Preference number: 4 (lower is better)
Translates to: ERCLIHLSVIREERRNYLFLQRS*LNVAGY
Trigger: ATATCCTGCTACATTCAGTCAACTCCTTTGCAAGAA...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCAGGATGTTTATCTATaGATAGCCTTCTTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: ERCLIHLSVIREERRNYLQDVYL*IAFLQR
Trigger: CCTTTGCAAGAAGGCTATTCATAGATAAACATCCTG...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp TTAGTAAATGAAAGAGTCAGGATCCAAATCCAGGTATCTCTGGAACAAAAGTTTTCTCCTCTGACTTGCTaGTCTTTTCAAAAATCAGTG +
Preference number: 4 (lower is better)
Translates to: LVNERVRIQIQVSLEQKFSPLTC*SFQKSV
Trigger: CACTGATTTTTGAAAAGATCAGCAAGTCAGAGGAGA...AAACTTTTGTTCCAGAGATACCTGGATTTGGATCCTGACTCTTTCATTTACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGAGACTCTCTAAGATGTaGGGTGACATAAGAATTGAG +
Preference number: 4 (lower is better)
Translates to: LNMEWYAAIREIFMHNELRLSKM*GDIRIE
Trigger: CTCAATTCTTATGTCACCTCACATCTTAGAGAGTCT...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTTACAGCAAAAGTATATaGGTCATTGTCTTCCACACA +
Preference number: 4 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHAYSKSI*VIVFHT
Trigger: TGTGTGGAAGACAATGACTCATATACTTTTGCTGTA...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CCA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTAATAGCCCCAATAGTTaGAAATGCAATGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: ERCLIHLSVIREERRNYLNSPNS*KCNADD
Trigger: GTCATCAGCATTGCATTTCCAACTATTGGGGCTATT...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGGACTTGGGCAAGGTATaGAAAACAATCATGATTCCA +
Preference number: 4 (lower is better)
Translates to: LNMEWYAAIREIFMHNELDLGKV*KTIMIP
Trigger: TGGAATCATGATTGTTTTCCATACCTTGCCCAAGTC...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCATACAGCAAAAGTATATaGGTCATTGTCTTCCACACA +
Preference number: 4 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSYSKSI*VIVFHT
Trigger: TGTGTGGAAGACAATGACTCATATACTTTTGCTGTA...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR TCA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTGATCATTTTAGTACTTaGTCCTTTCCCATTCACCAT +
Preference number: 4 (lower is better)
Translates to: ERCLIHLSVIREERRNYLDHFST*SFPIHH
Trigger: ATGGTGAATGGGAAAGGATCAAGTACTAAAATGATC...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR GCA 90 bp TTAGTAAATGAAAGAGTCAGGATCCAAATCCAGGTATCTCTGGAACAAAAGTTTATGTTGTGTAAGAGCTaGACAATTACGGCAATGTTT +
Preference number: 4 (lower is better)
Translates to: LVNERVRIQIQVSLEQKFMLCKS*TITAMF
Trigger: AAACATTGCCGTAATTGTGCAGCTCTTACACAACAT...AAACTTTTGTTCCAGAGATACCTGGATTTGGATCCTGACTCTTTCATTTACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CCA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGGCAACATATCTGTTATaGTCTCAGACTTTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: LNMEWYAAIREIFMHNELATYLL*SQTFQY
Trigger: ATACTGGAAAGTCTGAGACCATAACAGATATGTTGC...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
3UTR CAA 72 bp AAGCTCAACAGATTTTGCTGGCTGATACCCCTAATGTaGAACAGACCAAATCAAATGCTTAACTCTTTAATT +
Preference number: 4 (lower is better)
Translates to: KLNRFCWLIPLM*NRPNQMLNSLI
Trigger: AATTAAAGAGTTAAGCATTTGATTTGGTCTGTTCAACATTAGGGGTATCAGCCAGCAAAATCTGTTGAGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398742.2
ENST00000467205.6
CDS-3UTR CCA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTTCTCAGGGATTTAAATaGCTTTCCCAAGAATCATTA +
Preference number: 4 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFSQGFK*LSQESL
Trigger: TAATGATTCTTGGGAAAGCCATTTAAATCCCTGAGA...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS CCA 90 bp CACAGGCTGGGCTCTTGTATGGATGAGAGTCAAGTTAGCCCCGAATaGCAGCTCCCCAGGCTGGACCCTGCGGTTCCCATAGGCAGTCAG +
Preference number: 5 (lower is better)
Translates to: HRLGSCMDESQVSPE*QLPRLDPAVPIGSQ
Trigger: CTGACTGCCTATGGGAACCGCAGGGTCCAGCCTGGGGAGCTGCCATTCGGGGCTAACTTGACTCTCATCCATACAAGAGCCCAGCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296862.5
ENST00000507065.5
CDS GCA 90 bp CATCGCATACACCGTGTGGCCTGGCAGGCACCTTCTCCTTGCTTTTaGTTGCAGCCCATCCACATTTCCTGTGTGTGCAGCCAGCTGAAC +
Preference number: 5 (lower is better)
Translates to: HRIHRVAWQAPSPCF*LQPIHISCVCSQLN
Trigger: GTTCAGCTGGCTGCACACACAGGAAATGTGGATGGGCTGCAAGCAAAAGCAAGGAGAAGGTGCCTGCCAGGCCACACGGTGTATGCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296862.5
CDS GCA 90 bp AGACACCATCGCATACACCGTGTGGCCTGGCAGGCACCTTCTCCTTaGTTTTGCTTGCAGCCCATCCACATTTCCTGTGTGTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: RHHRIHRVAWQAPSP*FCLQPIHISCVCSQ
Trigger: CTGGCTGCACACACAGGAAATGTGGATGGGCTGCAAGCAAAAGCAAGGAGAAGGTGCCTGCCAGGCCACACGGTGTATGCGATGGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296862.5
CDS-3UTR CAA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGTCTCTACGGCAAATTaGCCCCACTCCCTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPVSTAN*PHSLAA
Trigger: AGCTGCCAGGGAGTGGGGCAAATTTGCCGTAGAGAC...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGTCTGGAGGGCAAGGTaGAGTACACTGGGAGTAGTC +
Preference number: 5 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPVWRAR*STLGVV
Trigger: GACTACTCCCAGTGTACTCAACCTTGCCCTCCAGAC...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS CCA 90 bp GTGGCTGGCCAAAGACAAACTCACCGGCAAATTTGCCCCACTCCCTaGCAGCTGGAGATATGGGCATTACTGGCTCTCTTCTGTCATACC +
Preference number: 5 (lower is better)
Translates to: VAGQRQTHRQICPTP*QLEIWALLALFCHT
Trigger: GGTATGACAGAAGAGAGCCAGTAATGCCCATATCTCCAGCTGCCAGGGAGTGGGGCAAATTTGCCGGTGAGTTTGTCTTTGGCCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp GAACAGCTTAGACAGAGGAGCCTTTCATCCTTTCTGCACATCACGCCCTCCTCCGCTGCCACACATCCCTaGTGGTGTGTTATTGGGCCA +
Preference number: 5 (lower is better)
Translates to: EQLRQRSLSSFLHITPSSAATHP*WCVIGP
Trigger: TGGCCCAATAACACACCACAAGGGATGTGTGGCAGC...GGAGGAGGGCGTGATGTGCAGAAAGGATGAAAGGCTCCTCTGTCTAAGCTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp GAACAGCTTAGACAGAGGAGCCTTTCATCCTTTCTGCACATCACGCCCTCCTCCTCCTGGAACATGGAATaGCCAATGGCAGCTCGCTGG +
Preference number: 5 (lower is better)
Translates to: EQLRQRSLSSFLHITPSSSWNME*PMAARW
Trigger: CCAGCGAGCTGCCATTGGCAATTCCATGTTCCAGGA...GGAGGAGGGCGTGATGTGCAGAAAGGATGAAAGGCTCCTCTGTCTAAGCTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCACGGTTGTGGCCCCCTTaGTCTTTTTGTTTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPRLWPP*SFCLLW
Trigger: CCACAGCAAACAAAAAGACAAAGGGGGCCACAACCG...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTAGGTGTAGAGTGGGCTTaGGGATGCAGGAGAGAGGGC +
Preference number: 5 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVGVEWA*GCRREG
Trigger: GCCCTCTCTCCTGCATCCCAAAGCCCACTCTACACC...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS TCA 90 bp GCTTTTGCTTGCAGCCCATCCACATTTCCTGTGTGTGCAGCCAGCTaGACAGTGTACTTGGTCAGAGCTGACTGCATTAGGGGATGGCAG +
Preference number: 5 (lower is better)
Translates to: AFACSPSTFPVCAAS*TVYLVRADCIRGWQ
Trigger: CTGCCATCCCCTAATGCAGTCAGCTCTGACCAAGTACACTGTTCAGCTGGCTGCACACACAGGAAATGTGGATGGGCTGCAAGCAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296862.5
CDS CCA 90 bp CTCTTCTGTCATACCTTGCTACAAATCACAGGCTGGGCTCTTGTATaGATGAGAGTCAAGTTAGCCCCGAATGGCAGCTCCCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LFCHTLLQITGWALV*MRVKLAPNGSSPGW
Trigger: CCAGCCTGGGGAGCTGCCATTCGGGGCTAACTTGACTCTCATCCATACAAGAGCCCAGCCTGTGATTTGTAGCAAGGTATGACAGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS CCA 90 bp GGCAAATTTGCCCCACTCCCTGGCAGCTGGAGATATGGGCATTACTaGCTCTCTTCTGTCATACCTTGCTACAAATCACAGGCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: GKFAPLPGSWRYGHY*LSSVIPCYKSQAGL
Trigger: GAGCCCAGCCTGTGATTTGTAGCAAGGTATGACAGAAGAGAGCCAGTAATGCCCATATCTCCAGCTGCCAGGGAGTGGGGCAAATTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp TCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACTGGGAGCCAGCACACTaGGGTTTCTACCTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: SFSVYMVLKRKYRAGSQHWEPAH*GFYLWL
Trigger: GAGCCAGAGGTAGAAACCCAAGTGTGCTGGCTCCCA...GTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAATTAAAGGCTGCCCATaGCCCCTTTGCCTTCATCCA +
Preference number: 5 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPIKGCP*PLCLHP
Trigger: TGGATGAAGGCAAAGGGGCAATGGGCAGCCTTTAAT...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS GCA 90 bp CTTTCTTGTTTTGTGGCTGGCCAAAGACAAACTCACCGGCAAATTTaGCCCACTCCCTGGCAGCTGGAGATATGGGCATTACTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: LSCFVAGQRQTHRQI*PTPWQLEIWALLAL
Trigger: GAGAGCCAGTAATGCCCATATCTCCAGCTGCCAGGGAGTGGGGCAAATTTGCCGGTGAGTTTGTCTTTGGCCAGCCACAAAACAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS CCA 90 bp TTTGTCAAGAGAAGCTTGCTACAAATCACAGGCTGGGCTCTTGTATaGATGAGAGTCAAGTTAGCCCCGAATGGCAGCTCCCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: FVKRSLLQITGWALV*MRVKLAPNGSSPGW
Trigger: CCAGCCTGGGGAGCTGCCATTCGGGGCTAACTTGACTCTCATCCATACAAGAGCCCAGCCTGTGATTTGTAGCAAGCTTCTCTTGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296862.5
CDS CCA 90 bp GCCAAAGACAAACTCACCGGCAAATTTGCCCCACTCCCTGGCAGCTaGAGATATGGGCATTACTGGCTCTCTTCTGTCATACCTTGCTAC +
Preference number: 5 (lower is better)
Translates to: AKDKLTGKFAPLPGS*RYGHYWLSSVIPCY
Trigger: GTAGCAAGGTATGACAGAAGAGAGCCAGTAATGCCCATATCTCCAGCTGCCAGGGAGTGGGGCAAATTTGCCGGTGAGTTTGTCTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCATGTAACTCTGCATCTTaGCCTCATCAACACCTGTCC +
Preference number: 5 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPCNSAS*PHQHLS
Trigger: GGACAGGTGTTGATGAGGCAAAGATGCAGAGTTACA...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCATCTCCTTGCTTTTGCTaGCAGCCTGATACAATGTCC +
Preference number: 5 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPSPCFC*QPDTMS
Trigger: GGACATTGTATCAGGCTGCAAGCAAAAGCAAGGAGA...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp TTCCTTGACATTTTTCAAGATGGTGTAGAGTGGGCTTTGGGATGCAGGAGAGAGAAGGCCAGGAGGGCTTaGGTCATGTCCCAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: FLDIFQDGVEWALGCRREKARRA*VMSQLS
Trigger: GCTCAACTGGGACATGACCAAAGCCCTCCTGGCCTT...CTCTCTCCTGCATCCCAAAGCCCACTCTACACCATCTTGAAAAATGTCAAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTGCAGCTCGCTGGGTCTaGACAATCACCAGTGTGACT +
Preference number: 5 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVAARWV*TITSVT
Trigger: AGTCACACTGGTGATTGTCAAGACCCAGCGAGCTGC...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp GAACAGCTTAGACAGAGGAGCCTTTCATCCTTTCTGCACATCACGCCCTCCTCCCAACAAAAACCACGGTaGTGGCCCCCTTTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: EQLRQRSLSSFLHITPSSQQKPR*WPPLSF
Trigger: AAAAGACAAAGGGGGCCACAACCGTGGTTTTTGTTG...GGAGGAGGGCGTGATGTGCAGAAAGGATGAAAGGCTCCTCTGTCTAAGCTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS GCA 90 bp GCCTACATTTGCAAACAGCTTGCTGGGAGTTTTCTTGAATCATTTTaGAGGCCTGCTGGTCCCATCTGTTCTCCACAGAGTGCCAGCCAA +
Preference number: 5 (lower is better)
Translates to: AYICKQLAGSFLESF*RPAGPICSPQSASQ
Trigger: TTGGCTGGCACTCTGTGGAGAACAGATGGGACCAGCAGGCCTGCAAAATGATTCAAGAAAACTCCCAGCAAGCTGTTTGCAAATGTAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS CCA 90 bp ATGGCTCTCACTTCCTGGAACATGGAATTGCCAATGGCAGCTCGCTaGGTCTTGACAATCACCAGTGTGACTGTGATCAGGTTTACTACC +
Preference number: 5 (lower is better)
Translates to: MALTSWNMELPMAAR*VLTITSVTVIRFTT
Trigger: GGTAGTAAACCTGATCACAGTCACACTGGTGATTGTCAAGACCCAGCGAGCTGCCATTGGCAATTCCATGTTCCAGGAAGTGAGAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS CCA 90 bp AGGATGGCGATGTTCTTGCTGATTCTCACAATGGCTCTCACTTCCTaGAACATGGAATTGCCAATGGCAGCTCGCTGGGTCTTGACAATC +
Preference number: 5 (lower is better)
Translates to: RMAMFLLILTMALTS*NMELPMAARWVLTI
Trigger: GATTGTCAAGACCCAGCGAGCTGCCATTGGCAATTCCATGTTCCAGGAAGTGAGAGCCATTGTGAGAATCAGCAAGAACATCGCCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS CCA 90 bp CAAACTCACCGGCAAATTTGCCCCACTCCCTGGCAGCTGGAGATATaGGCATTACTGGCTCTCTTCTGTCATACCTTGCTACAAATCACA +
Preference number: 5 (lower is better)
Translates to: QTHRQICPTPWQLEI*ALLALFCHTLLQIT
Trigger: TGTGATTTGTAGCAAGGTATGACAGAAGAGAGCCAGTAATGCCCATATCTCCAGCTGCCAGGGAGTGGGGCAAATTTGCCGGTGAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp CTCAGGCACACGTGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGAATGAAAGTCCAGTaGGAGATGCTTTTGCTGTTA +
Preference number: 5 (lower is better)
Translates to: LRHTCSEQIPVMCTLSWPGMKVQ*EMLLLL
Trigger: TAACAGCAAAAGCATCTCCAACTGGACTTTCATTCC...TGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCACGTGTGCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTGCCACCAGGACTGACTaGGGCAAGGTATGGAAAACA +
Preference number: 5 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVATRTD*GKVWKT
Trigger: TGTTTTCCATACCTTGCCCAAGTCAGTCCTGGTGGC...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp TTCCTTGACATTTTTCAAGATGGTGTAGAGTGGGCTTTGGGATGCAGGAGAGAGTTGGTCATGTCCCAGTaGAGCCAGCAGATCTCAGGT +
Preference number: 5 (lower is better)
Translates to: FLDIFQDGVEWALGCRRELVMSQ*SQQISG
Trigger: ACCTGAGATCTGCTGGCTCAACTGGGACATGACCAA...CTCTCTCCTGCATCCCAAAGCCCACTCTACACCATCTTGAAAAATGTCAAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTAAACCCTGGAATGCATaGAGCAGGGAGAAGATAATG +
Preference number: 5 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFKPWNA*SREKIM
Trigger: CATTATCTTCTCCCTGCTCAATGCATTCCAGGGTTT...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp GAACAGCTTAGACAGAGGAGCCTTTCATCCTTTCTGCACATCACGCCCTCCTCCCATCCTTGGGGTTTCTaGGTTAATGATGAAGCTAAG +
Preference number: 5 (lower is better)
Translates to: EQLRQRSLSSFLHITPSSHPWGF*VNDEAK
Trigger: CTTAGCTTCATCATTAACCAAGAAACCCCAAGGATG...GGAGGAGGGCGTGATGTGCAGAAAGGATGAAAGGCTCCTCTGTCTAAGCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS CCA 90 bp AGGATGAAGAAACCCTGGAATGCATTGAGCAGGGAGAAGATAATGTaGAAGGCCAGGGATCTGTCATCGATGACAGTGGCTACTCCAAAT +
Preference number: 5 (lower is better)
Translates to: RMKKPWNALSREKIM*KARDLSSMTVATPN
Trigger: ATTTGGAGTAGCCACTGTCATCGATGACAGATCCCTGGCCTTCCACATTATCTTCTCCCTGCTCAATGCATTCCAGGGTTTCTTCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp TTCCTTGACATTTTTCAAGATGGTGTAGAGTGGGCTTTGGGATGCAGGAGAGAGTTGCTTGGCCTACATTaGCAAACAGCTTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: FLDIFQDGVEWALGCRRELLGLH*QTACWE
Trigger: CTCCCAGCAAGCTGTTTGCAAATGTAGGCCAAGCAA...CTCTCTCCTGCATCCCAAAGCCCACTCTACACCATCTTGAAAAATGTCAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp CAACTCTTTGTGACTATTCATGAGGCTCCTCCCTCAGCAACACACAGAATCCAGAGGATGGCGATGTTCTaGCTGATTCTCACAATGGCT +
Preference number: 5 (lower is better)
Translates to: QLFVTIHEAPPSATHRIQRMAMF*LILTMA
Trigger: AGCCATTGTGAGAATCAGCAAGAACATCGCCATCCT...CTGGATTCTGTGTGTTGCTGAGGGAGGAGCCTCATGAATAGTCACAAAGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp TTCCTTGACATTTTTCAAGATGGTGTAGAGTGGGCTTTGGGATGCAGGAGAGAGCCTTTGTCTTTTTGTTaGCTGTGGCTGCCCAGCATG +
Preference number: 5 (lower is better)
Translates to: FLDIFQDGVEWALGCRREPLSFC*LWLPSM
Trigger: CATGCTGGGCAGCCACAGCAAACAAAAAGACAAAGG...CTCTCTCCTGCATCCCAAAGCCCACTCTACACCATCTTGAAAAATGTCAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp TCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACAGTCCTCGATTAGCATaGACTCACAACTCCAGACTT +
Preference number: 5 (lower is better)
Translates to: SFSVYMVLKRKYRAGSQHSPRLA*THNSRL
Trigger: AAGTCTGGAGTTGTGAGTCAATGCTAATCGAGGACT...GTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTAAGTGTCTATATGGTCTaGAAGAGGAAGTACAGGGCT +
Preference number: 5 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVSVYMV*KRKYRA
Trigger: AGCCCTGTACTTCCTCTTCAAGACCATATAGACACT...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTGTACCTAAGCCTGCATaGAGGAAAACCAGGACTATG +
Preference number: 5 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVVPKPA*RKTRTM
Trigger: CATAGTCCTGGTTTTCCTCAATGCAGGCTTAGGTAC...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp TTCCTTGACATTTTTCAAGATGGTGTAGAGTGGGCTTTGGGATGCAGGAGAGAGGACCAAATCACTTTCTaGGTGCGGTGTCAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: FLDIFQDGVEWALGCRREDQITF*VRCQQE
Trigger: TTCCTGCTGACACCGCACCAAGAAAGTGATTTGGTC...CTCTCTCCTGCATCCCAAAGCCCACTCTACACCATCTTGAAAAATGTCAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCAACTCACCGGCAAATTaGCCCCACTCCCTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGNSPAN*PHSLAA
Trigger: AGCTGCCAGGGAGTGGGGCAAATTTGCCGGTGAGTT...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS GCA 90 bp TGTTATTGGGCCACTAAGAAAGGAAGCCACAATGAACCACACATCTaGCATCAGCAAAGTGGCTGCAATGTTAACAATGCACACATGGCG +
Preference number: 5 (lower is better)
Translates to: CYWATKKGSHNEPHI*HQQSGCNVNNAHMA
Trigger: CGCCATGTGTGCATTGTTAACATTGCAGCCACTTTGCTGATGGCAGATGTGTGGTTCATTGTGGCTTCCTTTCTTAGTGGCCCAATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS-3UTR CAA 90 bp TCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACCTCCCAGTGACTTCATaGCTGGTATCATTAATTCTC +
Preference number: 5 (lower is better)
Translates to: SFSVYMVLKRKYRAGSQHLPVTS*LVSLIL
Trigger: GAGAATTAATGATACCAGCAATGAAGTCACTGGGAG...GTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp AGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACACTTGGACATTTGCAAACAGCTaGCTGGGAGTTTTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: SVYMVLKRKYRAGSQHTWTFANS*LGVFLN
Trigger: ATTCAAGAAAACTCCCAGCAAGCTGTTTGCAAATGT...CCAAGTGTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCGCTGCCACACATCCCTaGTGGTGTGTTATTGGGCCA +
Preference number: 5 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGAATHP*WCVIGP
Trigger: TGGCCCAATAACACACCACAAGGGATGTGTGGCAGC...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCGCAGCTCGCTGGGTCTaGACAATCACCAGTGTGACT +
Preference number: 5 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGAARWV*TITSVT
Trigger: AGTCACACTGGTGATTGTCAAGACCCAGCGAGCTGC...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCTCCTGGAACATGGAATaGCCAATGGCAGCTCGCTGG +
Preference number: 5 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGSWNME*PMAARW
Trigger: CCAGCGAGCTGCCATTGGCAATTCCATGTTCCAGGA...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp CAACTCTTTGTGACTATTCATGAGGCTCCTCCCTCAGCAACACACAGAATCCAGAGGCTTCTCTTATCTTaGGATCCAGGATGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: QLFVTIHEAPPSATHRIQRLLLS*DPGWFQ
Trigger: TTGGAACCATCCTGGATCCAAAGATAAGAGAAGCCT...CTGGATTCTGTGTGTTGCTGAGGGAGGAGCCTCATGAATAGTCACAAAGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTAATCCATGCAGTTCCTaGACATTTTTCAAGATGGTG +
Preference number: 5 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFNPCSS*TFFKMV
Trigger: CACCATCTTGAAAAATGTCAAGGAACTGCATGGATT...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp GGAAGGAAGGAAGGGACTGCACTCATACCTAAGGTGAGCCCCACTTTCTCCTTTATTGCTGTTGATATGTaGTGTAAGAGCTGCACAATT +
Preference number: 5 (lower is better)
Translates to: GRKEGTALIPKVSPTFSFIAVDM*CKSCTI
Trigger: AATTGTGCAGCTCTTACACAACATATCAACAGCAAT...AAAGGAGAAAGTGGGGCTCACCTTAGGTATGAGTGCAGTCCCTTCCTTCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp CTCTGGAACAAAAGTTTATTTCCCCACTCCATATGCTATTCCAAATCCATTGGCGCCACCAGGACTGACTaGGGCAAGGTATGGAAAACA +
Preference number: 5 (lower is better)
Translates to: LWNKSLFPHSICYSKSIGATRTD*GKVWKT
Trigger: TGTTTTCCATACCTTGCCCAAGTCAGTCCTGGTGGC...GCCAATGGATTTGGAATAGCATATGGAGTGGGGAAATAAACTTTTGTTCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp AGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACACTTGGATCTCACCCCTTCTCTaGAAAAGAACATACAAATCT +
Preference number: 5 (lower is better)
Translates to: SVYMVLKRKYRAGSQHTWISPLL*KRTYKS
Trigger: AGATTTGTATGTTCTTTTCAAGAGAAGGGGTGAGAT...CCAAGTGTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp TTCCTTGACATTTTTCAAGATGGTGTAGAGTGGGCTTTGGGATGCAGGAGAGAGATTCTTTTAAGTTCCTaGGGCAAAATGGCAGACAGG +
Preference number: 5 (lower is better)
Translates to: FLDIFQDGVEWALGCRREILLSS*GKMADR
Trigger: CCTGTCTGCCATTTTGCCCAAGGAACTTAAAAGAAT...CTCTCTCCTGCATCCCAAAGCCCACTCTACACCATCTTGAAAAATGTCAAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp TCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAGCACAAAGAGGTAAACAATTaGCTTGGCCTACATTTGCAA +
Preference number: 5 (lower is better)
Translates to: SFSVYMVLKRKYRAGSQHKEVNN*LGLHLQ
Trigger: TTGCAAATGTAGGCCAAGCAAATTGTTTACCTCTTT...GTGCTGGCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCAAAGGCCAGGAGGGCTTaGGTCATGTCCCAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSKARRA*VMSQLS
Trigger: GCTCAACTGGGACATGACCAAAGCCCTCCTGGCCTT...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp GGTGTCTTCAGCCAAACTTATGCATGGGGTCATGGCTGTGTGTTTGCTTGTGTTAAAGTATATGAGTCATaGTCTTCCACACAGCTGACT +
Preference number: 5 (lower is better)
Translates to: GVFSQTYAWGHGCVFACVKVYES*SSTQLT
Trigger: AGTCAGCTGTGTGGAAGACAATGACTCATATACTTT...AACACAAGCAAACACACAGCCATGACCCCATGCATAAGTTTGGCTGAAGACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp CATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAATTCTGGAGCTCCTTTTaGCAGAGGCTACTCAACCCT +
Preference number: 5 (lower is better)
Translates to: HCQCRQKIFQCLYGLEEEFWSSF*QRLLNP
Trigger: AGGGTTGAGTAGCCTCTGCAAAAAGGAGCTCCAGAA...TTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp TGCAGTGAGCAGATCCCTGTGATGTGTACTCTTTCCTGGCCAGGTAACTGTGTATGTAGCTATGTACAGTaGATGGACGAGAAATGTTTA +
Preference number: 5 (lower is better)
Translates to: CSEQIPVMCTLSWPGNCVCSYVQ*MDEKCL
Trigger: TAAACATTTCTCGTCCATCAACTGTACATAGCTACA...TACACAGTTACCTGGCCAGGAAAGAGTACACATCACAGGGATCTGCTCACTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS TCA 90 bp AGCTGCACAATTACGGCAATGTTTCCTGGTATCCAGGGAGACTGCTaGATGTTTCTAATTACACAAGACAGATCTGTGGGACACTTTTGT +
Preference number: 5 (lower is better)
Translates to: SCTITAMFPGIQGDC*MFLITQDRSVGHFC
Trigger: ACAAAAGTGTCCCACAGATCTGTCTTGTGTAATTAGAAACATTCAGCAGTCTCCCTGGATACCAGGAAACATTGCCGTAATTGTGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS-3UTR CAA 90 bp TTAGTAAATGAAAGAGTCAGGATCCAAATCCAGGTATCTCTGGAACAAAAGTTTGTCTGGAGGGCAAGGTaGAGTACACTGGGAGTAGTC +
Preference number: 5 (lower is better)
Translates to: LVNERVRIQIQVSLEQKFVWRAR*STLGVV
Trigger: GACTACTCCCAGTGTACTCAACCTTGCCCTCCAGAC...AAACTTTTGTTCCAGAGATACCTGGATTTGGATCCTGACTCTTTCATTTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp AGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCAACACCTGTCCATATaGCTGTTGATATGTTGTGTA +
Preference number: 5 (lower is better)
Translates to: RRSFSVYMVLKRKYRAGSQHLSI*LLICCV
Trigger: TACACAACATATCAACAGCAATATGGACAGGTGTTG...GCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTGCCCCCTTTGTCTTTTaGTTTGCTGTGGCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFAPFVF*FAVAAQ
Trigger: CTGGGCAGCCACAGCAAACAAAAAGACAAAGGGGGC...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp AGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAGTACAGGGCTGGGAGCCTGATACCCCTAATGTaGAACAGACCAAATCAAATG +
Preference number: 5 (lower is better)
Translates to: RRSFSVYMVLKRKYRAGSLIPLM*NRPNQM
Trigger: CATTTGATTTGGTCTGTTCAACATTAGGGGTATCAG...GCTCCCAGCCCTGTACTTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS TCA 90 bp TCATTGTCTTCCACACAGCTGACTTTCTTGTTTCCTGGTAAAGAATaGAGTAGTGTCAGATACGGAGAGAGAGGAGTCAAGAAGTCATCT +
Preference number: 5 (lower is better)
Translates to: SLSSTQLTFLFPGKE*SSVRYGERGVKKSS
Trigger: AGATGACTTCTTGACTCCTCTCTCTCCGTATCTGACACTACTTCATTCTTTACCAGGAAACAAGAAAGTCAGCTGTGTGGAAGACAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTCAGGTGTCAGTGATCTaGTGCCATGTCTTTTGCCTG +
Preference number: 5 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHAQVSVI*CHVFCL
Trigger: CAGGCAAAAGACATGGCACAAGATCACTGACACCTG...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp CATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAAAGGATAAGGAGTGCCTaGGCAAGCATCCAGAAAAAT +
Preference number: 5 (lower is better)
Translates to: HCQCRQKIFQCLYGLEEERIRSA*ASIQKN
Trigger: ATTTTTCTGGATGCTTGCCAAGGCACTCCTTATCCT...TTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCATTGGTCATGTCCCAGTaGAGCCAGCAGATCTCAGGT +
Preference number: 5 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSLVMSQ*SQQISG
Trigger: ACCTGAGATCTGCTGGCTCAACTGGGACATGACCAA...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCACAGGTGTCAGTGATCTaGTGCCATGTCTTTTGCCTG +
Preference number: 5 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSQVSVI*CHVFCL
Trigger: CAGGCAAAAGACATGGCACAAGATCACTGACACCTG...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp CATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAACAGTTGGAGATGCTTTaGCTGTTAAGAATGTGGTTG +
Preference number: 5 (lower is better)
Translates to: HCQCRQKIFQCLYGLEEEQLEML*LLRMWL
Trigger: CAACCACATTCTTAACAGCAAAAGCATCTCCAACTG...TTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp CATTGTCAGTGTAGGCAGAAGATCTTTCAGTGTCTATATGGTCTTGAAGAGGAACTTCTTGCAAAGGAGTaGACTGAATGTAGCAGGATA +
Preference number: 5 (lower is better)
Translates to: HCQCRQKIFQCLYGLEEELLAKE*TECSRI
Trigger: TATCCTGCTACATTCAGTCAACTCCTTTGCAAGAAG...TTCCTCTTCAAGACCATATAGACACTGAAAGATCTTCTGCCTACACTGACAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGTTGCTTGGCCTACATTaGCAAACAGCTTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: LNMEWYAAIREIFMHNELLLGLH*QTACWE
Trigger: CTCCCAGCAAGCTGTTTGCAAATGTAGGCCAAGCAA...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTTCTATGCTTTTCCCCTaGGTTCATGGCCAAGGAAGT +
Preference number: 5 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHASMLFP*VHGQGS
Trigger: ACTTCCTTGGCCATGAACCAAGGGGAAAAGCATAGA...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp TTAGTAAATGAAAGAGTCAGGATCCAAATCCAGGTATCTCTGGAACAAAAGTTTTGTAACTCTGCATCTTaGCCTCATCAACACCTGTCC +
Preference number: 5 (lower is better)
Translates to: LVNERVRIQIQVSLEQKFCNSAS*PHQHLS
Trigger: GGACAGGTGTTGATGAGGCAAAGATGCAGAGTTACA...AAACTTTTGTTCCAGAGATACCTGGATTTGGATCCTGACTCTTTCATTTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp TTAGTAAATGAAAGAGTCAGGATCCAAATCCAGGTATCTCTGGAACAAAAGTTTAGGATGGCGATGTTCTaGCTGATTCTCACAATGGCT +
Preference number: 5 (lower is better)
Translates to: LVNERVRIQIQVSLEQKFRMAMF*LILTMA
Trigger: AGCCATTGTGAGAATCAGCAAGAACATCGCCATCCT...AAACTTTTGTTCCAGAGATACCTGGATTTGGATCCTGACTCTTTCATTTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGTCTCTCACTTTGCACTaGGTCAGAAGCATCTGGACT +
Preference number: 5 (lower is better)
Translates to: LNMEWYAAIREIFMHNELSLTLH*VRSIWT
Trigger: AGTCCAGATGCTTCTGACCAAGTGCAAAGTGAGAGA...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTTCTCCTTGCTTTTGCTaGCAGCCTGATACAATGTCC +
Preference number: 5 (lower is better)
Translates to: ERCLIHLSVIREERRNYLSPCFC*QPDTMS
Trigger: GGACATTGTATCAGGCTGCAAGCAAAAGCAAGGAGA...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTAATCAGCGCTTCTGGTaGGACCAATCAGGGAAGAAT +
Preference number: 5 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFNQRFW*DQSGKN
Trigger: ATTCTTCCCTGATTGGTCCAACCAGAAGCGCTGATT...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGCTCTTCTGTCATACCTaGCTACAAATCACAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LNMEWYAAIREIFMHNELLFCHT*LQITGW
Trigger: CCAGCCTGTGATTTGTAGCAAGGTATGACAGAAGAG...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS TCA 90 bp CAAGTAGTACAGCAAAAGTATATGAGTCATTGTCTTCCACACAGCTaGCTTTCTTGTTTCCTGGTAAAGAATGAAGTAGTGTCAGATACG +
Preference number: 5 (lower is better)
Translates to: QVVQQKYMSHCLPHS*LSCFLVKNEVVSDT
Trigger: CGTATCTGACACTACTTCATTCTTTACCAGGAAACAAGAAAGTCAGCTGTGTGGAAGACAATGACTCATATACTTTTGCTGTACTACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCAAGGATAAGGAGTGCCTaGGCAAGCATCCAGAAAAAT +
Preference number: 5 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSRIRSA*ASIQKN
Trigger: ATTTTTCTGGATGCTTGCCAAGGCACTCCTTATCCT...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp TTAGTAAATGAAAGAGTCAGGATCCAAATCCAGGTATCTCTGGAACAAAAGTTTCTTACCTGGAATGCATaGAGCAGGGAGAAGATAATG +
Preference number: 5 (lower is better)
Translates to: LVNERVRIQIQVSLEQKFLTWNA*SREKIM
Trigger: CATTATCTTCTCCCTGCTCAATGCATTCCAGGTAAG...AAACTTTTGTTCCAGAGATACCTGGATTTGGATCCTGACTCTTTCATTTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCAGCTGACTTTCTTGTTTaGTGGCTGGCCAAAGACAAA +
Preference number: 5 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSADFLV*WLAKDK
Trigger: TTTGTCTTTGGCCAGCCACAAAACAAGAAAGTCAGC...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGCAGTTGGAGATGCTTTaGCTGTTAAGAATGTGGTTG +
Preference number: 5 (lower is better)
Translates to: LNMEWYAAIREIFMHNELQLEML*LLRMWL
Trigger: CAACCACATTCTTAACAGCAAAAGCATCTCCAACTG...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCAGGAATGAAAGTCCAGTaGGAGATGCTTTTGCTGTTA +
Preference number: 5 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSGMKVQ*EMLLLL
Trigger: TAACAGCAAAAGCATCTCCAACTGGACTTTCATTCC...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGCTTCTTGCAAAGGAGTaGACTGAATGTAGCAGGATA +
Preference number: 5 (lower is better)
Translates to: LNMEWYAAIREIFMHNELLLAKE*TECSRI
Trigger: TATCCTGCTACATTCAGTCAACTCCTTTGCAAGAAG...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCACTCCCAGTGACTTCATaGCTGGTATCATTAATTCTC +
Preference number: 5 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSLPVTS*LVSLIL
Trigger: GAGAATTAATGATACCAGCAATGAAGTCACTGGGAG...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCAATTCTTTTAAGTTCCTaGGGCAAAATGGCAGACAGG +
Preference number: 5 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSILLSS*GKMADR
Trigger: CCTGTCTGCCATTTTGCCCAAGGAACTTAAAAGAAT...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCAATGAATTCTCTCACTTaGCACTTGGTCAGAAGCATC +
Preference number: 5 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSMNSLT*HLVRSI
Trigger: GATGCTTCTGACCAAGTGCAAAGTGAGAGAATTCAT...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp GCCAAGTACTATACTACTTTACCTACATTTATCCACTTAAAGTCTCAGGGATTTCTGTCCATATTGCTGTaGATATGTTGTGTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: AKYYTTLPTFIHLKSQGFLSILL*ICCVRA
Trigger: AGCTCTTACACAACATATCAACAGCAATATGGACAG...AAATCCCTGAGACTTTAAGTGGATAAATGTAGGTAAAGTAGTATAGTACTTGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCACTGTCCATATTGCTGTaGATATGTTGTGTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSLSILL*ICCVRA
Trigger: AGCTCTTACACAACATATCAACAGCAATATGGACAG...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp GAACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCAACACCTGTCCATATaGCTGTTGATATGTTGTGTA +
Preference number: 5 (lower is better)
Translates to: ERCLIHLSVIREERRNYLQHLSI*LLICCV
Trigger: TACACAACATATCAACAGCAATATGGACAGGTGTTG...AAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp ACGTTGCTTAATTCATCTAAGTGTGATAAGAGAAGAGAGGAGAAACTATCTTCAACATTTGCAAACAGCTaGCTGGGAGTTTTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: TLLNSSKCDKRREEKLSSTFANS*LGVFLN
Trigger: ATTCAAGAAAACTCCCAGCAAGCTGTTTGCAAATGT...TGAAGATAGTTTCTCCTCTCTTCTCTTATCACACTTAGATGAATTAAGCAACGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp TTAGTAAATGAAAGAGTCAGGATCCAAATCCAGGTATCTCTGGAACAAAAGTTTAAAGTATATGAGTCATaGTCTTCCACACAGCTGACT +
Preference number: 5 (lower is better)
Translates to: LVNERVRIQIQVSLEQKFKVYES*SSTQLT
Trigger: AGTCAGCTGTGTGGAAGACAATGACTCATATACTTT...AAACTTTTGTTCCAGAGATACCTGGATTTGGATCCTGACTCTTTCATTTACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS-3UTR CAA 90 bp GACTTTTTATTGCACATATTTACCGAACATACTCTATGTACAAGGCACCATGCTCAGTCATCTATGTCCTaGCTTTGTAAAGAGGTTTTT +
Preference number: 5 (lower is better)
Translates to: DFLLHIFTEHTLCTRHHAQSSMS*LCKEVF
Trigger: AAAAACCTCTTTACAAAGCAAGGACATAGATGACTG...AGCATGGTGCCTTGTACATAGAGTATGTTCGGTAAATATGTGCAATAAAAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS-3UTR CAA 90 bp TTGAATATGGAATGGTATGCAGCCATTAGAGAAATATTCATGCATAATGAGCTGAAAGAGGTAAACAATTaGCTTGGCCTACATTTGCAA +
Preference number: 5 (lower is better)
Translates to: LNMEWYAAIREIFMHNELKEVNN*LGLHLQ
Trigger: TTGCAAATGTAGGCCAAGCAAATTGTTTACCTCTTT...CAGCTCATTATGCATGAATATTTCTCTAATGGCTGCATACCATTCCATATTCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS GCA 72 bp GTGTGGCCTGGCAGGCACCTTCTCCTTGCTTTTGCTTaGAGCCCATCCACATTTCCTGTGTGTGCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: VWPGRHLLLAFA*SPSTFPVCAAS
Trigger: GCTGGCTGCACACACAGGAAATGTGGATGGGCTGCAAGCAAAAGCAAGGAGAAGGTGCCTGCCAGGCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296862.5
CDS GCA 72 bp TTGCAGGCCTGCTGGTCCCATCTGTTCTCCACAGAGTaGCAGCCAACACACTGTGTCCTCCTCTCCTCTGAC +
Preference number: 6 (lower is better)
Translates to: LQACWSHLFSTE*QPTHCVLLSSD
Trigger: GTCAGAGGAGAGGAGGACACAGTGTGTTGGCTGGCACTCTGTGGAGAACAGATGGGACCAGCAGGCCTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS GCA 72 bp GTTCCCATAGGCAGTCAGCCCCATGTGCAGGAGTGCTaGAGCCTGACAGACAAGTCCTGCATGGGAGTAGCT +
Preference number: 6 (lower is better)
Translates to: VPIGSQPHVQEC*SLTDKSCMGVA
Trigger: AGCTACTCCCATGCAGGACTTGTCTGTCAGGCTGCAGCACTCCTGCACATGGGGCTGACTGCCTATGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS CCA 72 bp GGCTCTTGTATGGATGAGAGTCAAGTTAGCCCCGAATaGCAGCTCCCCAGGCTGGACCCTGCGGTTCCCATA +
Preference number: 6 (lower is better)
Translates to: GSCMDESQVSPE*QLPRLDPAVPI
Trigger: TATGGGAACCGCAGGGTCCAGCCTGGGGAGCTGCCATTCGGGGCTAACTTGACTCTCATCCATACAAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296862.5
ENST00000507065.5
CDS CAA 72 bp CGTGTGGCCTGGCAGGCACCTTCTCCTTGCTTTTGCTaGCAGCCCATCCACATTTCCTGTGTGTGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: RVAWQAPSPCFC*QPIHISCVCSQ
Trigger: CTGGCTGCACACACAGGAAATGTGGATGGGCTGCAAGCAAAAGCAAGGAGAAGGTGCCTGCCAGGCCACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296862.5
CDS CAA 90 bp CGCATACACCGTGTGGCCTGGCAGGCACCTTCTCCTTGCTTTTGCTaGCAGCCCATCCACATTTCCTGTGTGTGCAGCCAGCTGAACAGT +
Preference number: 6 (lower is better)
Translates to: RIHRVAWQAPSPCFC*QPIHISCVCSQLNS
Trigger: ACTGTTCAGCTGGCTGCACACACAGGAAATGTGGATGGGCTGCAAGCAAAAGCAAGGAGAAGGTGCCTGCCAGGCCACACGGTGTATGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296862.5
CDS CAA 90 bp CCATCGCATACACCGTGTGGCCTGGCAGGCACCTTCTCCTTGCTTTaGCTTGCAGCCCATCCACATTTCCTGTGTGTGCAGCCAGCTGAA +
Preference number: 6 (lower is better)
Translates to: PSHTPCGLAGTFSLL*LAAHPHFLCVQPAE
Trigger: TTCAGCTGGCTGCACACACAGGAAATGTGGATGGGCTGCAAGCAAAAGCAAGGAGAAGGTGCCTGCCAGGCCACACGGTGTATGCGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296862.5
CDS TCA 72 bp GAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTaGAACCCCGTCTCTACGGCAAATTTGCCCCACTCC +
Preference number: 6 (lower is better)
Translates to: EVRRSRPSWLTR*NPVSTANLPHS
Trigger: GGAGTGGGGCAAATTTGCCGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS GCA 72 bp CGCATACACCGTGTGGCCTGGCAGGCACCTTCTCCTTaGTTTTGCTTGCAGCCCATCCACATTTCCTGTGTG +
Preference number: 6 (lower is better)
Translates to: RIHRVAWQAPSP*FCLQPIHISCV
Trigger: CACACAGGAAATGTGGATGGGCTGCAAGCAAAAGCAAGGAGAAGGTGCCTGCCAGGCCACACGGTGTATGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296862.5
CDS CAA 72 bp ACACCGTGTGGCCTGGCAGGCACCTTCTCCTTGCTTTaGCTTGCAGCCCATCCACATTTCCTGTGTGTGCAG +
Preference number: 6 (lower is better)
Translates to: TPCGLAGTFSLL*LAAHPHFLCVQ
Trigger: CTGCACACACAGGAAATGTGGATGGGCTGCAAGCAAAAGCAAGGAGAAGGTGCCTGCCAGGCCACACGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296862.5
CDS GCA 72 bp CGCATACACCGTGTGGCCTGGCAGGCACCTTCTCCTTaGTTTTGCTTGCAGCCTGATACAATGTCCTACAGG +
Preference number: 6 (lower is better)
Translates to: RIHRVAWQAPSP*FCLQPDTMSYR
Trigger: CCTGTAGGACATTGTATCAGGCTGCAAGCAAAAGCAAGGAGAAGGTGCCTGCCAGGCCACACGGTGTATGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467205.6
ENST00000507065.5
CDS CAA 72 bp TCGCATACACCGTGTGGCCTGGCAGGCACCTTCTCCTaGCTTTTGCTTGCAGCCCATCCACATTTCCTGTGT +
Preference number: 6 (lower is better)
Translates to: SHTPCGLAGTFS*LLLAAHPHFLC
Trigger: ACACAGGAAATGTGGATGGGCTGCAAGCAAAAGCAAGGAGAAGGTGCCTGCCAGGCCACACGGTGTATGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296862.5
CDS TCA 72 bp TGCAGCCCATCCACATTTCCTGTGTGTGCAGCCAGCTaGACAGTGTACTTGGTCAGAGCTGACTGCATTAGG +
Preference number: 6 (lower is better)
Translates to: CSPSTFPVCAAS*TVYLVRADCIR
Trigger: CCTAATGCAGTCAGCTCTGACCAAGTACACTGTTCAGCTGGCTGCACACACAGGAAATGTGGATGGGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296862.5
CDS GCA 72 bp TTTGTGGCTGGCCAAAGACAAACTCACCGGCAAATTTaGCCCACTCCCTGGCAGCTGGAGATATGGGCATTA +
Preference number: 6 (lower is better)
Translates to: FVAGQRQTHRQI*PTPWQLEIWAL
Trigger: TAATGCCCATATCTCCAGCTGCCAGGGAGTGGGGCAAATTTGCCGGTGAGTTTGTCTTTGGCCAGCCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS CCA 72 bp CGTCTCTACGGCAAATTTGCCCCACTCCCTGGCAGCTaGAGATATGGGCATTACTGGCTCTCTTCTGTCATA +
Preference number: 6 (lower is better)
Translates to: RLYGKFAPLPGS*RYGHYWLSSVI
Trigger: TATGACAGAAGAGAGCCAGTAATGCCCATATCTCCAGCTGCCAGGGAGTGGGGCAAATTTGCCGTAGAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS CCA 72 bp GCCCCACTCCCTGGCAGCTGGAGATATGGGCATTACTaGCTCTCTTCTGTCATACCTTGCTACAAATCACAG +
Preference number: 6 (lower is better)
Translates to: APLPGSWRYGHY*LSSVIPCYKSQ
Trigger: CTGTGATTTGTAGCAAGGTATGACAGAAGAGAGCCAGTAATGCCCATATCTCCAGCTGCCAGGGAGTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS CAA 72 bp TTTTGTGGCTGGCCAAAGACAAACTCACCGGCAAATTaGCCCCACTCCCTGGCAGCTGGAGATATGGGCATT +
Preference number: 6 (lower is better)
Translates to: FCGWPKTNSPAN*PHSLAAGDMGI
Trigger: AATGCCCATATCTCCAGCTGCCAGGGAGTGGGGCAAATTTGCCGGTGAGTTTGTCTTTGGCCAGCCACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS CAA 90 bp ACTTTCTTGTTTTGTGGCTGGCCAAAGACAAACTCACCGGCAAATTaGCCCCACTCCCTGGCAGCTGGAGATATGGGCATTACTGGCTCT +
Preference number: 6 (lower is better)
Translates to: TFLFCGWPKTNSPAN*PHSLAAGDMGITGS
Trigger: AGAGCCAGTAATGCCCATATCTCCAGCTGCCAGGGAGTGGGGCAAATTTGCCGGTGAGTTTGTCTTTGGCCAGCCACAAAACAAGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS CCA 72 bp AGAAGCTTGCTACAAATCACAGGCTGGGCTCTTGTATaGATGAGAGTCAAGTTAGCCCCGAATGGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: RSLLQITGWALV*MRVKLAPNGSS
Trigger: GGAGCTGCCATTCGGGGCTAACTTGACTCTCATCCATACAAGAGCCCAGCCTGTGATTTGTAGCAAGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296862.5
CDS CCA 72 bp ACTTCCTGGAACATGGAATTGCCAATGGCAGCTCGCTaGGTCTTGACAATCACCAGTGTGACTGTGATCAGG +
Preference number: 6 (lower is better)
Translates to: TSWNMELPMAAR*VLTITSVTVIR
Trigger: CCTGATCACAGTCACACTGGTGATTGTCAAGACCCAGCGAGCTGCCATTGGCAATTCCATGTTCCAGGAAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS CCA 72 bp CATACCTTGCTACAAATCACAGGCTGGGCTCTTGTATaGATGAGAGTCAAGTTAGCCCCGAATGGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: HTLLQITGWALV*MRVKLAPNGSS
Trigger: GGAGCTGCCATTCGGGGCTAACTTGACTCTCATCCATACAAGAGCCCAGCCTGTGATTTGTAGCAAGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS CCA 72 bp AAACTCACCGGCAAATTTGCCCCACTCCCTGGCAGCTaGAGATATGGGCATTACTGGCTCTCTTCTGTCATA +
Preference number: 6 (lower is better)
Translates to: KLTGKFAPLPGS*RYGHYWLSSVI
Trigger: TATGACAGAAGAGAGCCAGTAATGCCCATATCTCCAGCTGCCAGGGAGTGGGGCAAATTTGCCGGTGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS CAA 90 bp CTCACTTCCTGGAACATGGAATTGCCAATGGCAGCTCGCTGGGTCTaGACAATCACCAGTGTGACTGTGATCAGGTTTACTACCACGATG +
Preference number: 6 (lower is better)
Translates to: LTSWNMELPMAARWV*TITSVTVIRFTTTM
Trigger: CATCGTGGTAGTAAACCTGATCACAGTCACACTGGTGATTGTCAAGACCCAGCGAGCTGCCATTGGCAATTCCATGTTCCAGGAAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS CCA 72 bp ATGTTCTTGCTGATTCTCACAATGGCTCTCACTTCCTaGAACATGGAATTGCCAATGGCAGCTCGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: MFLLILTMALTS*NMELPMAARWV
Trigger: GACCCAGCGAGCTGCCATTGGCAATTCCATGTTCCAGGAAGTGAGAGCCATTGTGAGAATCAGCAAGAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS CCA 72 bp AAACCCTGGAATGCATTGAGCAGGGAGAAGATAATGTaGAAGGCCAGGGATCTGTCATCGATGACAGTGGCT +
Preference number: 6 (lower is better)
Translates to: KPWNALSREKIM*KARDLSSMTVA
Trigger: AGCCACTGTCATCGATGACAGATCCCTGGCCTTCCACATTATCTTCTCCCTGCTCAATGCATTCCAGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS CAA 72 bp ATTCTCACAATGGCTCTCACTTCCTGGAACATGGAATaGCCAATGGCAGCTCGCTGGGTCTTGACAATCACC +
Preference number: 6 (lower is better)
Translates to: ILTMALTSWNME*PMAARWVLTIT
Trigger: GGTGATTGTCAAGACCCAGCGAGCTGCCATTGGCAATTCCATGTTCCAGGAAGTGAGAGCCATTGTGAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS CAA 90 bp TGGCAGCTGGAGATATGGGCATTACTGGCTCTCTTCTGTCATACCTaGCTACAAATCACAGGCTGGGCTCTTGTATGGATGAGAGTCAAG +
Preference number: 6 (lower is better)
Translates to: WQLEIWALLALFCHT*LQITGWALVWMRVK
Trigger: CTTGACTCTCATCCATACAAGAGCCCAGCCTGTGATTTGTAGCAAGGTATGACAGAAGAGAGCCAGTAATGCCCATATCTCCAGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS CAA 72 bp TGGAACATGGAATTGCCAATGGCAGCTCGCTGGGTCTaGACAATCACCAGTGTGACTGTGATCAGGTTTACT +
Preference number: 6 (lower is better)
Translates to: WNMELPMAARWV*TITSVTVIRFT
Trigger: AGTAAACCTGATCACAGTCACACTGGTGATTGTCAAGACCCAGCGAGCTGCCATTGGCAATTCCATGTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS CAA 90 bp CAATTTGCTTGGCCTACATTTGCAAACAGCTTGCTGGGAGTTTTCTaGAATCATTTTGCAGGCCTGCTGGTCCCATCTGTTCTCCACAGA +
Preference number: 6 (lower is better)
Translates to: QFAWPTFANSLLGVF*NHFAGLLVPSVLHR
Trigger: TCTGTGGAGAACAGATGGGACCAGCAGGCCTGCAAAATGATTCAAGAAAACTCCCAGCAAGCTGTTTGCAAATGTAGGCCAAGCAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS CAA 72 bp GAGATATGGGCATTACTGGCTCTCTTCTGTCATACCTaGCTACAAATCACAGGCTGGGCTCTTGTATGGATG +
Preference number: 6 (lower is better)
Translates to: EIWALLALFCHT*LQITGWALVWM
Trigger: CATCCATACAAGAGCCCAGCCTGTGATTTGTAGCAAGGTATGACAGAAGAGAGCCAGTAATGCCCATATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507065.5
CDS GCA 72 bp GCCACTAAGAAAGGAAGCCACAATGAACCACACATCTaGCATCAGCAAAGTGGCTGCAATGTTAACAATGCA +
Preference number: 6 (lower is better)
Translates to: ATKKGSHNEPHI*HQQSGCNVNNA
Trigger: TGCATTGTTAACATTGCAGCCACTTTGCTGATGGCAGATGTGTGGTTCATTGTGGCTTCCTTTCTTAGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS CCA 72 bp TCACTTTGCACTTGGTCAGAAGCATCTGGACTTACCTaGAATGCATTGAGCAGGGAGAAGATAATGTGGAAG +
Preference number: 6 (lower is better)
Translates to: SLCTWSEASGLT*NALSREKIMWK
Trigger: CTTCCACATTATCTTCTCCCTGCTCAATGCATTCCAGGTAAGTCCAGATGCTTCTGACCAAGTGCAAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296862.5
ENST00000507065.5
CDS TCA 72 bp TCCACACAGCTGACTTTCTTGTTTCCTGGTAAAGAATaGAGTAGTGTCAGATACGGAGAGAGAGGAGTCAAG +
Preference number: 6 (lower is better)
Translates to: STQLTFLFPGKE*SSVRYGERGVK
Trigger: CTTGACTCCTCTCTCTCCGTATCTGACACTACTTCATTCTTTACCAGGAAACAAGAAAGTCAGCTGTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS GCA 72 bp CCTGTCCATATTGCTGTTGATATGTTGTGTAAGAGCTaGACAATTACGGCAATGTTTCCTGGTATCCAGGGA +
Preference number: 6 (lower is better)
Translates to: PVHIAVDMLCKS*TITAMFPGIQG
Trigger: TCCCTGGATACCAGGAAACATTGCCGTAATTGTGCAGCTCTTACACAACATATCAACAGCAATATGGACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS CAA 90 bp TGCATCTTTGCCTCATCAACACCTGTCCATATTGCTGTTGATATGTaGTGTAAGAGCTGCACAATTACGGCAATGTTTCCTGGTATCCAG +
Preference number: 6 (lower is better)
Translates to: CIFASSTPVHIAVDM*CKSCTITAMFPGIQ
Trigger: CTGGATACCAGGAAACATTGCCGTAATTGTGCAGCTCTTACACAACATATCAACAGCAATATGGACAGGTGTTGATGAGGCAAAGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS CAA 90 bp TGGTGCTGTAACTCTGCATCTTTGCCTCATCAACACCTGTCCATATaGCTGTTGATATGTTGTGTAAGAGCTGCACAATTACGGCAATGT +
Preference number: 6 (lower is better)
Translates to: WCCNSASLPHQHLSI*LLICCVRAAQLRQC
Trigger: ACATTGCCGTAATTGTGCAGCTCTTACACAACATATCAACAGCAATATGGACAGGTGTTGATGAGGCAAAGATGCAGAGTTACAGCACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS TCA 72 bp ATTACGGCAATGTTTCCTGGTATCCAGGGAGACTGCTaGATGTTTCTAATTACACAAGACAGATCTGTGGGA +
Preference number: 6 (lower is better)
Translates to: ITAMFPGIQGDC*MFLITQDRSVG
Trigger: TCCCACAGATCTGTCTTGTGTAATTAGAAACATTCAGCAGTCTCCCTGGATACCAGGAAACATTGCCGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS CAA 72 bp GCCTCATCAACACCTGTCCATATTGCTGTTGATATGTaGTGTAAGAGCTGCACAATTACGGCAATGTTTCCT +
Preference number: 6 (lower is better)
Translates to: ASSTPVHIAVDM*CKSCTITAMFP
Trigger: AGGAAACATTGCCGTAATTGTGCAGCTCTTACACAACATATCAACAGCAATATGGACAGGTGTTGATGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS CAA 72 bp GCATCTTTGCCTCATCAACACCTGTCCATATTGCTGTaGATATGTTGTGTAAGAGCTGCACAATTACGGCAA +
Preference number: 6 (lower is better)
Translates to: ASLPHQHLSILL*ICCVRAAQLRQ
Trigger: TTGCCGTAATTGTGCAGCTCTTACACAACATATCAACAGCAATATGGACAGGTGTTGATGAGGCAAAGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS CAA 72 bp GGTAAACAATTTGCTTGGCCTACATTTGCAAACAGCTaGCTGGGAGTTTTCTTGAATCATTTTGCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: GKQFAWPTFANS*LGVFLNHFAGL
Trigger: CAGGCCTGCAAAATGATTCAAGAAAACTCCCAGCAAGCTGTTTGCAAATGTAGGCCAAGCAAATTGTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS CAA 90 bp TGTAACTCTGCATCTTTGCCTCATCAACACCTGTCCATATTGCTGTaGATATGTTGTGTAAGAGCTGCACAATTACGGCAATGTTTCCTG +
Preference number: 6 (lower is better)
Translates to: CNSASLPHQHLSILL*ICCVRAAQLRQCFL
Trigger: CAGGAAACATTGCCGTAATTGTGCAGCTCTTACACAACATATCAACAGCAATATGGACAGGTGTTGATGAGGCAAAGATGCAGAGTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS CAA 72 bp AACTCTGCATCTTTGCCTCATCAACACCTGTCCATATaGCTGTTGATATGTTGTGTAAGAGCTGCACAATTA +
Preference number: 6 (lower is better)
Translates to: NSASLPHQHLSI*LLICCVRAAQL
Trigger: TAATTGTGCAGCTCTTACACAACATATCAACAGCAATATGGACAGGTGTTGATGAGGCAAAGATGCAGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS CAA 72 bp GAAACACCAAGTAGTACAGCAAAAGTATATGAGTCATaGTCTTCCACACAGCTGACTTTCTTGTTTCCTGGT +
Preference number: 6 (lower is better)
Translates to: ETPSSTAKVYES*SSTQLTFLFPG
Trigger: ACCAGGAAACAAGAAAGTCAGCTGTGTGGAAGACAATGACTCATATACTTTTGCTGTACTACTTGGTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS TCA 72 bp CCAATGTTATCTCCAGATATGGTGGTGCCCATAGTATaGATGAAGACATCTGATATGTCAACAGGATGTTTA +
Preference number: 6 (lower is better)
Translates to: PMLSPDMVVPIV*MKTSDMSTGCL
Trigger: TAAACATCCTGTTGACATATCAGATGTCTTCATTCATACTATGGGCACCACCATATCTGGAGATAACATTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5
CDS TCA 72 bp CAGCAAAAGTATATGAGTCATTGTCTTCCACACAGCTaGCTTTCTTGTTTCCTGGTAAAGAATGAAGTAGTG +
Preference number: 6 (lower is better)
Translates to: QQKYMSHCLPHS*LSCFLVKNEVV
Trigger: CACTACTTCATTCTTTACCAGGAAACAAGAAAGTCAGCTGTGTGGAAGACAATGACTCATATACTTTTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467205.6
CDS CCA 72 bp GATCTGTGGGACACTTTTGTAGCAACATATCTGTTATaGTCTCAGACTTTCCAGTATATACACTTATTTTTA +
Preference number: 6 (lower is better)
Translates to: DLWDTFVATYLL*SQTFQYIHLFL
Trigger: TAAAAATAAGTGTATATACTGGAAAGTCTGAGACCATAACAGATATGTTGCTACAAAAGTGTCCCACAGATC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296862.5
ENST00000467205.6
ENST00000507065.5