RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRE3 (Homo sapiens)

Ensembl gene IDs: ENSG00000131355

Ensembl transcript IDs: ENST00000253673.6, ENST00000344373.8, ENST00000443157.6, ENST00000595472.1, ENST00000599900.5

Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TATTTGCAGTGGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTaGATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGT +
Preference number: 1 (lower is better)
Translates to: YLQWSCFGFPGTSID*IHHSEEKCNLPHIC
Trigger: ACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACCACTGCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
3UTR GCA 90 bp TTGAGGAAAAGGACCTCTTCATTTACAAAAAGTCAAGGAAATATTTaGAGTGGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTGAA +
Preference number: 1 (lower is better)
Translates to: LRKRTSSFTKSQGNI*SGHALGFQGQALTE
Trigger: TTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACCACTGCAAATATTTCCTTGACTTTTTGTAAATGAAGAGGTCCTTTTCCTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
3UTR CCA 90 bp TTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTaGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTT +
Preference number: 1 (lower is better)
Translates to: FTTHLLRAYCGEQTA*EVKVDYFLSKDDMF
Trigger: AAACATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
3UTR CAA 90 bp GGAAATATTTGCAGTGGTCATGCTTTGGGTTTCCAGGGACAAGCATaGACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACA +
Preference number: 2 (lower is better)
Translates to: GNICSGHALGFQGQA*TEYTIVKRNAIYHT
Trigger: TGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACCACTGCAAATATTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
3UTR-3UTR CCA 90 bp TTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACGGAGAACAAACAGCTTaGGAAGTAAAGGTTGATTAC +
Preference number: 2 (lower is better)
Translates to: FQGQALTEYTIVKRNAIYGEQTA*EVKVDY
Trigger: GTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCC...GTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
3UTR-3UTR TCA 90 bp GCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTTTGGGAAGTAAAGGTTaGTTACTTCCTCTCCAAGGA +
Preference number: 2 (lower is better)
Translates to: ALTEYTIVKRNAIYHTFVLGSKG*LLPLQG
Trigger: TCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAA...AACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
3UTR-3UTR CCA 90 bp GCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGGAGAACAAACAGCTTaGGAAGTAAAGGTTGATTAC +
Preference number: 2 (lower is better)
Translates to: ALTEYTIVKRNAIYHTFVGEQTA*EVKVDY
Trigger: GTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCC...AACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
3UTR TCA 72 bp TGGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTaGATACACCATAGTGAAGAGAAATGCAATTTACCA +
Preference number: 3 (lower is better)
Translates to: WSCFGFPGTSID*IHHSEEKCNLP
Trigger: TGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR GCA 90 bp GGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGCCCTGGACCACTGGCTaGCCTGCCCTGTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GHALGFQGQALTEYTIVKPWTTG*PALCSS
Trigger: GGAAGAGCACAGGGCAGGGCAGCCAGTGGTCCAGGG...CTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp GGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGACGGGATCCTCCTCCTaGCTGGTCAGGGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: GHALGFQGQALTEYTIVKTGSSS*LVRAIR
Trigger: CCTGATGGCCCTGACCAGCCAGGAGGAGGATCCCGT...CTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR TCA 90 bp GGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGGCCCTCGGTTGTCTTTaGGGAGGTGGTGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: GHALGFQGQALTEYTIVKALGCL*GGGVLT
Trigger: TGTCAGGACACCACCTCCTCAAAGACAACCGAGGGC...CTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253673.6
CDS-3UTR CCA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGCCATCCCTGGACCACTaGCTGCCCTGCCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWPSLDH*LPCPVL
Trigger: GAGCACAGGGCAGGGCAGCCAGTGGTCCAGGGATGG...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp CAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAACCATCCCTGGACCACTaGCTGCCCTGCCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: QFTTHLLRAYCGEQTAWEPSLDH*LPCPVL
Trigger: GAGCACAGGGCAGGGCAGCCAGTGGTCCAGGGATGG...TTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp TTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCCATCCCTGGACCACTaGCTGCCCTGCCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LRAYCGEQTAWEVKVDYFPSLDH*LPCPVL
Trigger: GAGCACAGGGCAGGGCAGCCAGTGGTCCAGGGATGG...GAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp TACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGAAGCAGCCATCCCTaGACCACTGGCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: YHTFVESLLWRTNSLGSKGSSHP*TTGCPA
Trigger: GGCAGGGCAGCCAGTGGTCCAGGGATGGCTGCTTCC...TTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR GCA 90 bp AGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCCCCTGGACCACTGGCTaGCCTGCCCTGTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RNAIYHTFVESLLWRTNSPWTTG*PALCSS
Trigger: GGAAGAGCACAGGGCAGGGCAGCCAGTGGTCCAGGG...GCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR GCA 90 bp GAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTCCCTGGACCACTGGCTaGCCTGCCCTGTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: EMQFTTHLLRAYCGEQTAPWTTG*PALCSS
Trigger: GGAAGAGCACAGGGCAGGGCAGCCAGTGGTCCAGGG...AGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp GAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTCCATCCCTGGACCACTaGCTGCCCTGCCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: EMQFTTHLLRAYCGEQTAPSLDH*LPCPVL
Trigger: GAGCACAGGGCAGGGCAGCCAGTGGTCCAGGGATGG...AGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp AGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCGGAAGCAGCCATCCCTaGACCACTGGCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RNAIYHTFVESLLWRTNSGSSHP*TTGCPA
Trigger: GGCAGGGCAGCCAGTGGTCCAGGGATGGCTGCTTCC...GCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp CATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATACGGGATCCTCCTCCTaGCTGGTCAGGGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: HLLRAYCGEQTAWEVKVDTGSSS*LVRAIR
Trigger: CCTGATGGCCCTGACCAGCCAGGAGGAGGATCCCGT...ATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp CAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAACGGGATCCTCCTCCTaGCTGGTCAGGGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: QFTTHLLRAYCGEQTAWETGSSS*LVRAIR
Trigger: CCTGATGGCCCTGACCAGCCAGGAGGAGGATCCCGT...TTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp GGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGAATCCCTGGTCCAGGTaGAGCCAGCATCGATCAGCA +
Preference number: 4 (lower is better)
Translates to: GHALGFQGQALTEYTIVKNPWSR*SQHRSA
Trigger: TGCTGATCGATGCTGGCTCCACCTGGACCAGGGATT...CTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR TCA 90 bp GGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGGTGTGTCTCCCTGGATaGTGTCACTGCAACGGATGT +
Preference number: 4 (lower is better)
Translates to: GHALGFQGQALTEYTIVKVCLPG*CHCNGC
Trigger: ACATCCGTTGCAGTGACATCATCCAGGGAGACACAC...CTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR GCA 90 bp ACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGAGAGCCCCTGGACCACTGGCTaGCCTGCCCTGTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TEYTIVKRNAIYHTFVESPWTTG*PALCSS
Trigger: GGAAGAGCACAGGGCAGGGCAGCCAGTGGTCCAGGG...GCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp AAGAGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACGGAAGCAGCCATCCCTaGACCACTGGCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: KRNAIYHTFVESLLWRTNGSSHP*TTGCPA
Trigger: GGCAGGGCAGCCAGTGGTCCAGGGATGGCTGCTTCC...GTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp TTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACACGGGATCCTCCTCCTaGCTGGTCAGGGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: FQGQALTEYTIVKRNAIYTGSSS*LVRAIR
Trigger: CCTGATGGCCCTGACCAGCCAGGAGGAGGATCCCGT...GTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR TCA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGACCCCTCACTGGGTTTTaGGTCAGGACCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGPLTGF*VRTHLA
Trigger: AGCAAGATGGGTCCTGACTCAAAACCCAGTGAGGGG...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAGTCCCTGCATTTCTGTaGTACGGGTATCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGVPAFL*YGYPTP
Trigger: TGGCGTGGGATACCCGTACCACAGAAATGCAGGGAC...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp GGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGGCAGTGGTCATGCTTTaGGTTTCCAGGGACAAGCAT +
Preference number: 4 (lower is better)
Translates to: GHALGFQGQALTEYTIVKAVVML*VSRDKH
Trigger: ATGCTTGTCCCTGGAAACCCAAAGCATGACCACTGC...CTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR TCA 90 bp AGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCGTGTGTCTCCCTGGATaGTGTCACTGCAACGGATGT +
Preference number: 4 (lower is better)
Translates to: RAYCGEQTAWEVKVDYFLVCLPG*CHCNGC
Trigger: ACATCCGTTGCAGTGACATCATCCAGGGAGACACAC...GAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAGCGAAGCTGGACAGGTaGCTGCAATTACACATGGTG +
Preference number: 4 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGAKLDR*LQLHMV
Trigger: CACCATGTGTAATTGCAGTCACCTGTCCAGCTTCGC...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGACAAGGAAACTCCACATaGATCCCTGGTCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGQGNST*IPGPGG
Trigger: TCCACCTGGACCAGGGATTCATGTGGAGTTTCCTTG...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR GCA 90 bp GGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGAGCTGGACAGGTGACTaGAATTACACATGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: GHALGFQGQALTEYTIVKSWTGD*NYTWCD
Trigger: GTCACACCATGTGTAATTGCAGTCACCTGTCCAGCT...CTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAGACACAGGAAGCATTTaGGGGGCACTTAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGDTGSI*GALSTG
Trigger: TCCTGTGCTAAGTGCCCCCCAAATGCTTCCTGTGTC...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp AGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCGACACAGGAAGCATTTaGGGGGCACTTAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: RAYCGEQTAWEVKVDYFLDTGSI*GALSTG
Trigger: TCCTGTGCTAAGTGCCCCCCAAATGCTTCCTGTGTC...GAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGACCTTGTGTGTCTCCCTaGATGATGTCACTGCAACGG +
Preference number: 4 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGPCVSP*MMSLQR
Trigger: CCGTTGCAGTGACATCATCCAGGGAGACACACAAGG...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp AGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCCCTTGTGTGTCTCCCTaGATGATGTCACTGCAACGG +
Preference number: 4 (lower is better)
Translates to: RAYCGEQTAWEVKVDYFLPCVSP*MMSLQR
Trigger: CCGTTGCAGTGACATCATCCAGGGAGACACACAAGG...GAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp GGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGTCAGCGTCACAGACTTaGAGAGAGACACGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GHALGFQGQALTEYTIVKSASQT*RETRSF
Trigger: AAAGGAACGTGTCTCTCTCCAAGTCTGTGACGCTGA...CTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp CATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATAATCCCTGGTCCAGGTaGAGCCAGCATCGATCAGCA +
Preference number: 4 (lower is better)
Translates to: HLLRAYCGEQTAWEVKVDNPWSR*SQHRSA
Trigger: TGCTGATCGATGCTGGCTCCACCTGGACCAGGGATT...ATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp CAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAAATCCCTGGTCCAGGTaGAGCCAGCATCGATCAGCA +
Preference number: 4 (lower is better)
Translates to: QFTTHLLRAYCGEQTAWENPWSR*SQHRSA
Trigger: TGCTGATCGATGCTGGCTCCACCTGGACCAGGGATT...TTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGCTCCACATGAATCCCTaGTCCAGGTGGAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWLHMNP*SRWSQH
Trigger: ATGCTGGCTCCACCTGGACCAGGGATTCATGTGGAG...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp TACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAACTCCACATGAATCCCTaGTCCAGGTGGAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: YHTFVESLLWRTNSLGSKLHMNP*SRWSQH
Trigger: ATGCTGGCTCCACCTGGACCAGGGATTCATGTGGAG...TTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp GGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGCAGGACCCATCTTGCTaGAAAGTGTGTATGTCTCAG +
Preference number: 4 (lower is better)
Translates to: GHALGFQGQALTEYTIVKQDPSC*KVCMSQ
Trigger: CTGAGACATACACACTTTCCAGCAAGATGGGTCCTG...CTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR TCA 90 bp GAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGGTGTGTCTCCCTGGATaGTGTCACTGCAACGGATGT +
Preference number: 4 (lower is better)
Translates to: EQTAWEVKVDYFLSKDDMVCLPG*CHCNGC
Trigger: ACATCCGTTGCAGTGACATCATCCAGGGAGACACAC...CATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGCGAAGCTGGACAGGTaGCTGCAATTACACATGGTG +
Preference number: 4 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWAKLDR*LQLHMV
Trigger: CACCATGTGTAATTGCAGTCACCTGTCCAGCTTCGC...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp CATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATGCGAAGCTGGACAGGTaGCTGCAATTACACATGGTG +
Preference number: 4 (lower is better)
Translates to: HLLRAYCGEQTAWEVKVDAKLDR*LQLHMV
Trigger: CACCATGTGTAATTGCAGTCACCTGTCCAGCTTCGC...ATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp TACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGCGAAGCTGGACAGGTaGCTGCAATTACACATGGTG +
Preference number: 4 (lower is better)
Translates to: YHTFVESLLWRTNSLGSKAKLDR*LQLHMV
Trigger: CACCATGTGTAATTGCAGTCACCTGTCCAGCTTCGC...TTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp CAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAACAAGGAAACTCCACATaGATCCCTGGTCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: QFTTHLLRAYCGEQTAWEQGNST*IPGPGG
Trigger: TCCACCTGGACCAGGGATTCATGTGGAGTTTCCTTG...TTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp CATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATCAAGGAAACTCCACATaGATCCCTGGTCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: HLLRAYCGEQTAWEVKVDQGNST*IPGPGG
Trigger: TCCACCTGGACCAGGGATTCATGTGGAGTTTCCTTG...ATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp TTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACCCCCTCACTGGGTTTTaGGTCAGGACCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: FQGQALTEYTIVKRNAIYPLTGF*VRTHLA
Trigger: AGCAAGATGGGTCCTGACTCAAAACCCAGTGAGGGG...GTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR GCA 90 bp CAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGGGGTCATCTTCACGTaGTGGAAAGTCAGCGTCACA +
Preference number: 4 (lower is better)
Translates to: QFTTHLLRAYCGEQTAWEGVIFT*WKVSVT
Trigger: TGTGACGCTGACTTTCCAGCACGTGAAGATGACCCC...TTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR GCA 90 bp TTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCGGGGTCATCTTCACGTaGTGGAAAGTCAGCGTCACA +
Preference number: 4 (lower is better)
Translates to: LRAYCGEQTAWEVKVDYFGVIFT*WKVSVT
Trigger: TGTGACGCTGACTTTCCAGCACGTGAAGATGACCCC...GAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR GCA 90 bp TACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGGGTCATCTTCACGTaGTGGAAAGTCAGCGTCACA +
Preference number: 4 (lower is better)
Translates to: YHTFVESLLWRTNSLGSKGVIFT*WKVSVT
Trigger: TGTGACGCTGACTTTCCAGCACGTGAAGATGACCCC...TTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR GCA 90 bp GGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGTATTTGCAGTGGTCATaGTTTGGGTTTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: GHALGFQGQALTEYTIVKYLQWS*FGFPGT
Trigger: TGTCCCTGGAAACCCAAAGCATGACCACTGCAAATA...CTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR GCA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGCACTCACCTCTTTCCTaGCCTCGGTTGTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWHSPLS*PRLSLR
Trigger: CCTCAAAGACAACCGAGGGCAGGAAAGAGGTGAGTG...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599900.5
CDS-3UTR CCA 90 bp TTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCAGAAAGCAGAGGCCTaGAAGAAGCAATGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LRAYCGEQTAWEVKVDYFQKAEA*KKQWSL
Trigger: CAGGGACCATTGCTTCTTCCAGGCCTCTGCTTTCTG...GAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGACACAGGAAGCATTTaGGGGGCACTTAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWDTGSI*GALSTG
Trigger: TCCTGTGCTAAGTGCCCCCCAAATGCTTCCTGTGTC...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAGTCATCTTCACGTGCTaGAAAGTCAGCGTCACAGAC +
Preference number: 4 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGVIFTC*KVSVTD
Trigger: GTCTGTGACGCTGACTTTCCAGCACGTGAAGATGAC...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp AGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCGTCATCTTCACGTGCTaGAAAGTCAGCGTCACAGAC +
Preference number: 4 (lower is better)
Translates to: RAYCGEQTAWEVKVDYFLVIFTC*KVSVTD
Trigger: GTCTGTGACGCTGACTTTCCAGCACGTGAAGATGAC...GAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGATGGAGCACAGCACCTTaGGTTCAGTTCGATCAATCC +
Preference number: 4 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGWSTAP*VQFDQS
Trigger: GGATTGATCGAACTGAACCCAAGGTGCTGTGCTCCA...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp GAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTCTCCACATGAATCCCTaGTCCAGGTGGAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: EMQFTTHLLRAYCGEQTALHMNP*SRWSQH
Trigger: ATGCTGGCTCCACCTGGACCAGGGATTCATGTGGAG...AGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp AGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCAAACATCCCCCTCACTaGGTTTTGAGTCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: RAYCGEQTAWEVKVDYFLKHPPH*VLSQDP
Trigger: TGGGTCCTGACTCAAAACCCAGTGAGGGGGATGTTT...GAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp TCCTTAGCTTCATTCTTCATAATGCCAAAGAGATCCATGGATATGATTTTCCATGCCCTCGGTTGTCTTTaGGGAGGTGGTGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: SLASFFIMPKRSMDMIFHALGCL*GGGVLT
Trigger: TGTCAGGACACCACCTCCTCAAAGACAACCGAGGGC...ATGGAAAATCATATCCATGGATCTCTTTGGCATTATGAAGAATGAAGCTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000599900.5
CDS-3UTR TCA 90 bp AGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCAGTGGTAGCTGTGGATaGGATTTCTTGTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RAYCGEQTAWEVKVDYFLSGSCG*DFLSPF
Trigger: GAAGGGAGACAAGAAATCTCATCCACAGCTACCACT...GAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000344373.8
CDS-3UTR TCA 90 bp GAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTGTGTGTCTCCCTGGATaGTGTCACTGCAACGGATGT +
Preference number: 4 (lower is better)
Translates to: EMQFTTHLLRAYCGEQTAVCLPG*CHCNGC
Trigger: ACATCCGTTGCAGTGACATCATCCAGGGAGACACAC...AGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp GGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGCAATTACACATGGTGTaGCTCTTGTTCACGTGTATC +
Preference number: 4 (lower is better)
Translates to: GHALGFQGQALTEYTIVKQLHMV*LLFTCI
Trigger: GATACACGTGAACAAGAGTCACACCATGTGTAATTG...CTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR TCA 90 bp GGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGTTACCACACATTTGTTaGGAGCCTATTGTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: GHALGFQGQALTEYTIVKLPHIC*EPIVEN
Trigger: GTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAA...CTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR TCA 90 bp ACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGAGAGCGCCCTCGGTTGTCTTTaGGGAGGTGGTGTCGTTACA +
Preference number: 4 (lower is better)
Translates to: TEYTIVKRNAIYHTFVESALGCL*GGGVVT
Trigger: TGTAACGACACCACCTCCTCAAAGACAACCGAGGGC...GCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344373.8
CDS-3UTR GCA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGAAGCAATGGTCCCTaGATTTCTGTGGTACGGGTA +
Preference number: 4 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGRSNGP*ISVVRV
Trigger: TACCCGTACCACAGAAATGCAGGGACCATTGCTTCT...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR GCA 90 bp GGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGTGTTCATTCCCAGAATaGAGTCTATATCCTGGGACA +
Preference number: 4 (lower is better)
Translates to: GHALGFQGQALTEYTIVKCSFPE*SLYPGT
Trigger: TGTCCCAGGATATAGACTGCATTCTGGGAATGAACA...CTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253673.6
CDS-3UTR CCA 90 bp CAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGCCTGGAAGAAGCAATaGTCCCTGCATTTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: QFTTHLLRAYCGEQTAWEAWKKQ*SLHFCG
Trigger: ACCACAGAAATGCAGGGACCATTGCTTCTTCCAGGC...TTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp AGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCCAGAAAGCAGAGGCCTaGAAGAAGCAATGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RNAIYHTFVESLLWRTNSQKAEA*KKQWSL
Trigger: CAGGGACCATTGCTTCTTCCAGGCCTCTGCTTTCTG...GCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp CAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTTGACACAGGAAGCATTTaGGGGGCACTTAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: QTAWEVKVDYFLSKDDMFDTGSI*GALSTG
Trigger: TCCTGTGCTAAGTGCCCCCCAAATGCTTCCTGTGTC...AAACATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGATCAGCGTCACAGACTTaGAGAGAGACACGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGSASQT*RETRSF
Trigger: AAAGGAACGTGTCTCTCTCCAAGTCTGTGACGCTGA...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp CAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTCATCTTCACGTGCTaGAAAGTCAGCGTCACAGAC +
Preference number: 4 (lower is better)
Translates to: QFTTHLLRAYCGEQTAWEVIFTC*KVSVTD
Trigger: GTCTGTGACGCTGACTTTCCAGCACGTGAAGATGAC...TTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp AGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCAGACCTTTTTGGTACTaGGGGTCATCTTCACGTGCT +
Preference number: 4 (lower is better)
Translates to: RAYCGEQTAWEVKVDYFLRPFWY*GSSSRA
Trigger: AGCACGTGAAGATGACCCCCAGTACCAAAAAGGTCT...GAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp TACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAATCAGGACAGCGAAGCTaGACAGGTGACTGCAATTAC +
Preference number: 4 (lower is better)
Translates to: YHTFVESLLWRTNSLGSKSGQRS*TGDCNY
Trigger: GTAATTGCAGTCACCTGTCCAGCTTCGCTGTCCTGA...TTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGTCAGGACAGCGAAGCTaGACAGGTGACTGCAATTAC +
Preference number: 4 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWSGQRS*TGDCNY
Trigger: GTAATTGCAGTCACCTGTCCAGCTTCGCTGTCCTGA...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGTGGAGCACAGCACCTTaGGTTCAGTTCGATCAATCC +
Preference number: 4 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWWSTAP*VQFDQS
Trigger: GGATTGATCGAACTGAACCCAAGGTGCTGTGCTCCA...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp GAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGAAACATCCCCCTCACTaGGTTTTGAGTCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: EQTAWEVKVDYFLSKDDMKHPPH*VLSQDP
Trigger: TGGGTCCTGACTCAAAACCCAGTGAGGGGGATGTTT...CATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp TACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAAAACATCCCCCTCACTaGGTTTTGAGTCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: YHTFVESLLWRTNSLGSKKHPPH*VLSQDP
Trigger: TGGGTCCTGACTCAAAACCCAGTGAGGGGGATGTTT...TTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp CATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATGCAGTGGTCATGCTTTaGGTTTCCAGGGACAAGCAT +
Preference number: 4 (lower is better)
Translates to: HLLRAYCGEQTAWEVKVDAVVML*VSRDKH
Trigger: ATGCTTGTCCCTGGAAACCCAAAGCATGACCACTGC...ATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp AGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTTGAGTTTCAATAGCTaGGAAGGGTCTGGGGATCAG +
Preference number: 4 (lower is better)
Translates to: RAYCGEQTAWEVKVDYFLLSFNS*EGSGDQ
Trigger: CTGATCCCCAGACCCTTCCCAGCTATTGAAACTCAA...GAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599900.5
CDS-3UTR TCA 90 bp AGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCGAAGTTTTGGTTTTCTaGGTCACAGCTCCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: RAYCGEQTAWEVKVDYFLEVLVF*VTAPKR
Trigger: CCTCTTTGGAGCTGTGACTCAGAAAACCAAAACTTC...GAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp TTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCTGGTTGCAGGTGCAGTaGGTGTTATTGACACAGGAA +
Preference number: 4 (lower is better)
Translates to: LRAYCGEQTAWEVKVDYFWLQVQ*VLLTQE
Trigger: TTCCTGTGTCAATAACACTCACTGCACCTGCAACCA...GAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGTCTCCAAGGGGAATGTaGATAGTTTCTGCCCAGATC +
Preference number: 4 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWSPRGM*IVSAQI
Trigger: GATCTGGGCAGAAACTATTCACATTCCCCTTGGAGA...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp GAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTCTCCAAGGGGAATGTaGATAGTTTCTGCCCAGATC +
Preference number: 4 (lower is better)
Translates to: EQTAWEVKVDYFLSKDDMSPRGM*IVSAQI
Trigger: GATCTGGGCAGAAACTATTCACATTCCCCTTGGAGA...CATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAGCAACGGATGTCCATTaGGTTCATTTGGACGTTCAA +
Preference number: 4 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGATDVH*VHLDVQ
Trigger: TTGAACGTCCAAATGAACTCAATGGACATCCGTTGC...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp CATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATAGTAGACCAAGAAGATaGAGAAGCCTTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HLLRAYCGEQTAWEVKVDSRPRR*RSLGGC
Trigger: ACAGCCTCCAAGGCTTCTTCATCTTCTTGGTCTACT...ATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp TTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCAGTAGACCAAGAAGATaGAGAAGCCTTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LRAYCGEQTAWEVKVDYFSRPRR*RSLGGC
Trigger: ACAGCCTCCAAGGCTTCTTCATCTTCTTGGTCTACT...GAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp TACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAAGTAGACCAAGAAGATaGAGAAGCCTTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: YHTFVESLLWRTNSLGSKSRPRR*RSLGGC
Trigger: ACAGCCTCCAAGGCTTCTTCATCTTCTTGGTCTACT...TTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp TCCTTAGCTTCATTCTTCATAATGCCAAAGAGATCCATGGATATGATTTTCCATCCCCTCACTGGGTTTTaGGTCAGGACCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: SLASFFIMPKRSMDMIFHPLTGF*VRTHLA
Trigger: AGCAAGATGGGTCCTGACTCAAAACCCAGTGAGGGG...ATGGAAAATCATATCCATGGATCTCTTTGGCATTATGAAGAATGAAGCTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp GCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTCCCCTCACTGGGTTTTaGGTCAGGACCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: ALTEYTIVKRNAIYHTFVPLTGF*VRTHLA
Trigger: AGCAAGATGGGTCCTGACTCAAAACCCAGTGAGGGG...AACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR GCA 90 bp TTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACGGAAGCTCTCTACTGTaGCGTAAGCCAACCACCTTT +
Preference number: 4 (lower is better)
Translates to: FQGQALTEYTIVKRNAIYGSSLL*RKPTTF
Trigger: AAAGGTGGTTGGCTTACGGCACAGTAGAGAGCTTCC...GTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR GCA 90 bp TTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCAGAAGCAATGGTCCCTaGATTTCTGTGGTACGGGTA +
Preference number: 4 (lower is better)
Translates to: LRAYCGEQTAWEVKVDYFRSNGP*ISVVRV
Trigger: TACCCGTACCACAGAAATGCAGGGACCATTGCTTCT...GAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR GCA 90 bp GGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGAAGTATATCCATGGTTaGAGGTGCAGTGAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: GHALGFQGQALTEYTIVKKYIHG*RCSECY
Trigger: ATAACACTCACTGCACCTGCAACCATGGATATACTT...CTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR GCA 90 bp GAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTGTCCACAATCTTTTaGAGCTCTTTCCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: EQTAWEVKVDYFLSKDDMLSTIF*SSFLPS
Trigger: CGAGGGCAGGAAAGAGCTGCAAAAGATTGTGGACAA...CATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000344373.8
CDS-3UTR GCA 90 bp AAGAGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACGGGGTCATCTTCACGTaGTGGAAAGTCAGCGTCACA +
Preference number: 4 (lower is better)
Translates to: KRNAIYHTFVESLLWRTNGVIFT*WKVSVT
Trigger: TGTGACGCTGACTTTCCAGCACGTGAAGATGACCCC...GTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR GCA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGAGCTGGACAGGTGACTaGAATTACACATGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWSWTGD*NYTWCD
Trigger: GTCACACCATGTGTAATTGCAGTCACCTGTCCAGCT...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR GCA 90 bp CAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAAGCTGGACAGGTGACTaGAATTACACATGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: QFTTHLLRAYCGEQTAWESWTGD*NYTWCD
Trigger: GTCACACCATGTGTAATTGCAGTCACCTGTCCAGCT...TTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp GCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGTCCCTGCATTTCTGTaGTACGGGTATCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: ALTEYTIVKRNAIYHTFVVPAFL*YGYPTP
Trigger: TGGCGTGGGATACCCGTACCACAGAAATGCAGGGAC...AACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp TCCTTAGCTTCATTCTTCATAATGCCAAAGAGATCCATGGATATGATTTTCCATGTCCCTGCATTTCTGTaGTACGGGTATCCCACGCCA +
Preference number: 4 (lower is better)
Translates to: SLASFFIMPKRSMDMIFHVPAFL*YGYPTP
Trigger: TGGCGTGGGATACCCGTACCACAGAAATGCAGGGAC...ATGGAAAATCATATCCATGGATCTCTTTGGCATTATGAAGAATGAAGCTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp TTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACGCCTGGAAGAAGCAATaGTCCCTGCATTTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: FQGQALTEYTIVKRNAIYAWKKQ*SLHFCG
Trigger: ACCACAGAAATGCAGGGACCATTGCTTCTTCCAGGC...GTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp ACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGAGAGCCAGAAAGCAGAGGCCTaGAAGAAGCAATGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: TEYTIVKRNAIYHTFVESQKAEA*KKQWSL
Trigger: CAGGGACCATTGCTTCTTCCAGGCCTCTGCTTTCTG...GCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp TTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCTTGTCTTTGAGGAGGTaGTGTCCTGACAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: LRAYCGEQTAWEVKVDYFLSLRR*CPDRCS
Trigger: AGAACACCTGTCAGGACACCACCTCCTCAAAGACAA...GAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000599900.5
CDS-3UTR CCA 90 bp AAGAGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACCCTTGTGTGTCTCCCTaGATGATGTCACTGCAACGG +
Preference number: 4 (lower is better)
Translates to: KRNAIYHTFVESLLWRTNPCVSP*MMSLQR
Trigger: CCGTTGCAGTGACATCATCCAGGGAGACACACAAGG...GTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGTCAGCGTCACAGACTTaGAGAGAGACACGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWSASQT*RETRSF
Trigger: AAAGGAACGTGTCTCTCTCCAAGTCTGTGACGCTGA...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp CAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTTGTCATCTTCACGTGCTaGAAAGTCAGCGTCACAGAC +
Preference number: 4 (lower is better)
Translates to: QTAWEVKVDYFLSKDDMFVIFTC*KVSVTD
Trigger: GTCTGTGACGCTGACTTTCCAGCACGTGAAGATGAC...AAACATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp CATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATAGACCTTTTTGGTACTaGGGGTCATCTTCACGTGCT +
Preference number: 4 (lower is better)
Translates to: HLLRAYCGEQTAWEVKVDRPFWY*GSSSRA
Trigger: AGCACGTGAAGATGACCCCCAGTACCAAAAAGGTCT...ATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp TTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACTCAGGACAGCGAAGCTaGACAGGTGACTGCAATTAC +
Preference number: 4 (lower is better)
Translates to: FQGQALTEYTIVKRNAIYSGQRS*TGDCNY
Trigger: GTAATTGCAGTCACCTGTCCAGCTTCGCTGTCCTGA...GTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp AGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTGGAGCACAGCACCTTaGGTTCAGTTCGATCAATCC +
Preference number: 4 (lower is better)
Translates to: RNAIYHTFVESLLWRTNSWSTAP*VQFDQS
Trigger: GGATTGATCGAACTGAACCCAAGGTGCTGTGCTCCA...GCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp TTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCAACGCCATAGCCGACTaGGAACATGATCCACTTCAT +
Preference number: 4 (lower is better)
Translates to: LRAYCGEQTAWEVKVDYFNAIAD*EHDPLH
Trigger: ATGAAGTGGATCATGTTCCCAGTCGGCTATGGCGTT...GAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGAACGCCATAGCCGACTaGGAACATGATCCACTTCAT +
Preference number: 4 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWNAIAD*EHDPLH
Trigger: ATGAAGTGGATCATGTTCCCAGTCGGCTATGGCGTT...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp TCCTTAGCTTCATTCTTCATAATGCCAAAGAGATCCATGGATATGATTTTCCATCTCCACATGAATCCCTaGTCCAGGTGGAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SLASFFIMPKRSMDMIFHLHMNP*SRWSQH
Trigger: ATGCTGGCTCCACCTGGACCAGGGATTCATGTGGAG...ATGGAAAATCATATCCATGGATCTCTTTGGCATTATGAAGAATGAAGCTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp CATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATAATTCGCAGAGAAAATaGCACAGACTGGGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: HLLRAYCGEQTAWEVKVDNSQRK*HRLGQG
Trigger: TCCTTGGCCCAGTCTGTGCCATTTTCTCTGCGAATT...ATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp GAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGCAGGACCCATCTTGCTaGAAAGTGTGTATGTCTCAG +
Preference number: 4 (lower is better)
Translates to: EQTAWEVKVDYFLSKDDMQDPSC*KVCMSQ
Trigger: CTGAGACATACACACTTTCCAGCAAGATGGGTCCTG...CATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp CAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTTAAACATCCCCCTCACTaGGTTTTGAGTCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: QTAWEVKVDYFLSKDDMFKHPPH*VLSQDP
Trigger: TGGGTCCTGACTCAAAACCCAGTGAGGGGGATGTTT...AAACATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp AGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCGTTGAGAGCCTATTGTaGAGAACAAACAGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RAYCGEQTAWEVKVDYFLVESLL*RTNSLG
Trigger: TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAAC...GAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp GAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGGAAGTTTTGGTTTTCTaGGTCACAGCTCCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: EQTAWEVKVDYFLSKDDMEVLVF*VTAPKR
Trigger: CCTCTTTGGAGCTGTGACTCAGAAAACCAAAACTTC...CATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp TTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACAGTAGACCAAGAAGATaGAGAAGCCTTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: FQGQALTEYTIVKRNAIYSRPRR*RSLGGC
Trigger: ACAGCCTCCAAGGCTTCTTCATCTTCTTGGTCTACT...GTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR TCA 90 bp AGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTTGTCTGTAATCGCTTaGGTTTCAATAGCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RAYCGEQTAWEVKVDYFLLSVIA*VSIAGK
Trigger: CTTCCCAGCTATTGAAACTCAAGCGATTACAGACAA...GAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599900.5
CDS-3UTR GCA 90 bp ACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGAGAGCGGAAGCTCTCTACTGTaGCGTAAGCCAACCACCTTT +
Preference number: 4 (lower is better)
Translates to: TEYTIVKRNAIYHTFVESGSSLL*RKPTTF
Trigger: AAAGGTGGTTGGCTTACGGCACAGTAGAGAGCTTCC...GCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR GCA 90 bp AGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGTCCACAATCTTTTaGAGCTCTTTCCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: RNAIYHTFVESLLWRTNSLSTIF*SSFLPS
Trigger: CGAGGGCAGGAAAGAGCTGCAAAAGATTGTGGACAA...GCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000344373.8
CDS-3UTR GCA 90 bp GAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTATTTGCAGTGGTCATaGTTTGGGTTTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: EQTAWEVKVDYFLSKDDMYLQWS*FGFPGT
Trigger: TGTCCCTGGAAACCCAAAGCATGACCACTGCAAATA...CATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp CAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTTTTGTCTTTGAGGAGGTaGTGTCCTGACAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: QTAWEVKVDYFLSKDDMFLSLRR*CPDRCS
Trigger: AGAACACCTGTCAGGACACCACCTCCTCAAAGACAA...AAACATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000599900.5
CDS-3UTR CCA 90 bp AGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCAGACCTTTTTGGTACTaGGGGTCATCTTCACGTGCT +
Preference number: 4 (lower is better)
Translates to: RNAIYHTFVESLLWRTNSRPFWY*GSSSRA
Trigger: AGCACGTGAAGATGACCCCCAGTACCAAAAAGGTCT...GCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp TACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAACACAGAAGACCTTTTTaGTACTGGGGGTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: YHTFVESLLWRTNSLGSKHRRPF*YWGSSS
Trigger: TGAAGATGACCCCCAGTACCAAAAAGGTCTTCTGTG...TTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp TTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCACAGAAGACCTTTTTaGTACTGGGGGTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: LRAYCGEQTAWEVKVDYFHRRPF*YWGSSS
Trigger: TGAAGATGACCCCCAGTACCAAAAAGGTCTTCTGTG...GAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp AAGAGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACTCAGGACAGCGAAGCTaGACAGGTGACTGCAATTAC +
Preference number: 4 (lower is better)
Translates to: KRNAIYHTFVESLLWRTNSGQRS*TGDCNY
Trigger: GTAATTGCAGTCACCTGTCCAGCTTCGCTGTCCTGA...GTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp CAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTTAATTCGCAGAGAAAATaGCACAGACTGGGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: QTAWEVKVDYFLSKDDMFNSQRK*HRLGQG
Trigger: TCCTTGGCCCAGTCTGTGCCATTTTCTCTGCGAATT...AAACATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp GAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTCAGGACCCATCTTGCTaGAAAGTGTGTATGTCTCAG +
Preference number: 4 (lower is better)
Translates to: EMQFTTHLLRAYCGEQTAQDPSC*KVCMSQ
Trigger: CTGAGACATACACACTTTCCAGCAAGATGGGTCCTG...AGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp CAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTTGAGAGCCTATTGTaGAGAACAAACAGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: QFTTHLLRAYCGEQTAWEVESLL*RTNSLG
Trigger: TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAAC...TTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp AAGAGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACGCAGTGGTCATGCTTTaGGTTTCCAGGGACAAGCAT +
Preference number: 4 (lower is better)
Translates to: KRNAIYHTFVESLLWRTNAVVML*VSRDKH
Trigger: ATGCTTGTCCCTGGAAACCCAAAGCATGACCACTGC...GTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR TCA 90 bp ACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGAGAGCTCTCCAAGGGGAATGTaGATAGTTTCTGCCCAGATC +
Preference number: 4 (lower is better)
Translates to: TEYTIVKRNAIYHTFVESSPRGM*IVSAQI
Trigger: GATCTGGGCAGAAACTATTCACATTCCCCTTGGAGA...GCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR TCA 90 bp TTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCAATTACACATGGTGTaGCTCTTGTTCACGTGTATC +
Preference number: 4 (lower is better)
Translates to: LRAYCGEQTAWEVKVDYFQLHMV*LLFTCI
Trigger: GATACACGTGAACAAGAGTCACACCATGTGTAATTG...GAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp CATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATCAATTACACATGGTGTaGCTCTTGTTCACGTGTATC +
Preference number: 4 (lower is better)
Translates to: HLLRAYCGEQTAWEVKVDQLHMV*LLFTCI
Trigger: GATACACGTGAACAAGAGTCACACCATGTGTAATTG...ATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGATCTCTAAACCACTTTTaGTATTGTTTCTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGSLNHF*YCFWTC
Trigger: GCAGGTCCAGAAACAATATCAAAAGTGGTTTAGAGA...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp CAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAATTGGGAAGTAAAGGTTaGTTACTTCCTCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: QFTTHLLRAYCGEQTAWELGSKG*LLPLQG
Trigger: TCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAA...TTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp TACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAATTACCACACATTTGTTaGGAGCCTATTGTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: YHTFVESLLWRTNSLGSKLPHIC*EPIVEN
Trigger: GTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAA...TTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp AGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCGGGACAAGCATTGACTaGATACACCATAGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: RNAIYHTFVESLLWRTNSGTSID*IHHSEE
Trigger: CTCTTCACTATGGTGTATTCAGTCAATGCTTGTCCC...GCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR TCA 90 bp CATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATAGGTCAGCTGACTCATaGAATTGCTATCAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: HLLRAYCGEQTAWEVKVDRSADS*NCYQKS
Trigger: GCTTTTCTGATAGCAATTTCATGAGTCAGCTGACCT...ATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344373.8
CDS-3UTR GCA 90 bp TCCTTAGCTTCATTCTTCATAATGCCAAAGAGATCCATGGATATGATTTTCCATGGAAGCTCTCTACTGTaGCGTAAGCCAACCACCTTT +
Preference number: 4 (lower is better)
Translates to: SLASFFIMPKRSMDMIFHGSSLL*RKPTTF
Trigger: AAAGGTGGTTGGCTTACGGCACAGTAGAGAGCTTCC...ATGGAAAATCATATCCATGGATCTCTTTGGCATTATGAAGAATGAAGCTAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR GCA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAAGTATATCCATGGTTaGAGGTGCAGTGAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGKYIHG*RCSECY
Trigger: ATAACACTCACTGCACCTGCAACCATGGATATACTT...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR GCA 90 bp CAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAATGTTCATTCCCAGAATaGAGTCTATATCCTGGGACA +
Preference number: 4 (lower is better)
Translates to: QFTTHLLRAYCGEQTAWECSFPE*SLYPGT
Trigger: TGTCCCAGGATATAGACTGCATTCTGGGAATGAACA...TTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000599900.5
CDS-3UTR GCA 90 bp CAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTTTATTTGCAGTGGTCATaGTTTGGGTTTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: QTAWEVKVDYFLSKDDMFYLQWS*FGFPGT
Trigger: TGTCCCTGGAAACCCAAAGCATGACCACTGCAAATA...AAACATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp ACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGAGAGCTCAGCGTCACAGACTTaGAGAGAGACACGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TEYTIVKRNAIYHTFVESSASQT*RETRSF
Trigger: AAAGGAACGTGTCTCTCTCCAAGTCTGTGACGCTGA...GCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp CAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTTCACAGAAGACCTTTTTaGTACTGGGGGTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: QTAWEVKVDYFLSKDDMFHRRPF*YWGSSS
Trigger: TGAAGATGACCCCCAGTACCAAAAAGGTCTTCTGTG...AAACATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp TACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGACTGCAATTACACATaGTGTGACTCTTGTTCACGT +
Preference number: 4 (lower is better)
Translates to: YHTFVESLLWRTNSLGSKDCNYT*CDSCSR
Trigger: ACGTGAACAAGAGTCACACCATGTGTAATTGCAGTC...TTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp TTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCGACTGCAATTACACATaGTGTGACTCTTGTTCACGT +
Preference number: 4 (lower is better)
Translates to: LRAYCGEQTAWEVKVDYFDCNYT*CDSCSR
Trigger: ACGTGAACAAGAGTCACACCATGTGTAATTGCAGTC...GAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp ACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGAGAGCAATTCGCAGAGAAAATaGCACAGACTGGGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: TEYTIVKRNAIYHTFVESNSQRK*HRLGQG
Trigger: TCCTTGGCCCAGTCTGTGCCATTTTCTCTGCGAATT...GCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp AGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGTCTTTGAGGAGGTaGTGTCGTTACATGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RNAIYHTFVESLLWRTNSLSLRR*CRYMSP
Trigger: TGGAGACATGTAACGACACCACCTCCTCAAAGACAA...GCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344373.8
CDS-3UTR TCA 90 bp TCCTTAGCTTCATTCTTCATAATGCCAAAGAGATCCATGGATATGATTTTCCATTGCAGTGAGTGTTATTaGCACAGGAAGCATTTGGGG +
Preference number: 4 (lower is better)
Translates to: SLASFFIMPKRSMDMIFHCSECY*HRKHLG
Trigger: CCCCAAATGCTTCCTGTGTCAATAACACTCACTGCA...ATGGAAAATCATATCCATGGATCTCTTTGGCATTATGAAGAATGAAGCTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp GCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTAGTGGTAGCTGTGGATaGGATTTCTTGTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: ALTEYTIVKRNAIYHTFVSGSCG*DFLSPF
Trigger: GAAGGGAGACAAGAAATCTCATCCACAGCTACCACT...AACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000344373.8
CDS-3UTR TCA 90 bp AAGAGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACGCAACGGATGTCCATTaGGTTCATTTGGACGTTCAA +
Preference number: 4 (lower is better)
Translates to: KRNAIYHTFVESLLWRTNATDVH*VHLDVQ
Trigger: TTGAACGTCCAAATGAACTCAATGGACATCCGTTGC...GTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp GAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTCTCTAAACCACTTTTaGTATTGTTTCTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: EQTAWEVKVDYFLSKDDMSLNHF*YCFWTC
Trigger: GCAGGTCCAGAAACAATATCAAAAGTGGTTTAGAGA...CATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp AGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTaGTTACTTCCTCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: RNAIYHTFVESLLWRTNSLGSKG*LLPLQG
Trigger: TCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAA...GCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp TTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACTTGGGAAGTAAAGGTTaGTTACTTCCTCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: FQGQALTEYTIVKRNAIYLGSKG*LLPLQG
Trigger: TCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAA...GTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR TCA 90 bp GAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTTACCACACATTTGTTaGGAGCCTATTGTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: EMQFTTHLLRAYCGEQTALPHIC*EPIVEN
Trigger: GTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAA...AGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR GCA 90 bp TTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCAAGTATATCCATGGTTaGAGGTGCAGTGAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: LRAYCGEQTAWEVKVDYFKYIHG*RCSECY
Trigger: ATAACACTCACTGCACCTGCAACCATGGATATACTT...GAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR GCA 90 bp GCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTAGCTGGACAGGTGACTaGAATTACACATGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: ALTEYTIVKRNAIYHTFVSWTGD*NYTWCD
Trigger: GTCACACCATGTGTAATTGCAGTCACCTGTCCAGCT...AACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR GCA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGAGTCAAGGAAATATTTaGAGTGGTCATGCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWSQGNI*SGHALG
Trigger: ACCCAAAGCATGACCACTGCAAATATTTCCTTGACT...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp CATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATATGCAGTCTATATCCTaGGACACATTGACAGTAGAA +
Preference number: 4 (lower is better)
Translates to: HLLRAYCGEQTAWEVKVDMQSIS*DTLTVE
Trigger: TTCTACTGTCAATGTGTCCCAGGATATAGACTGCAT...ATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000599900.5
CDS-3UTR CCA 90 bp TCCTTAGCTTCATTCTTCATAATGCCAAAGAGATCCATGGATATGATTTTCCATAGACCTTTTTGGTACTaGGGGTCATCTTCACGTGCT +
Preference number: 4 (lower is better)
Translates to: SLASFFIMPKRSMDMIFHRPFWY*GSSSRA
Trigger: AGCACGTGAAGATGACCCCCAGTACCAAAAAGGTCT...ATGGAAAATCATATCCATGGATCTCTTTGGCATTATGAAGAATGAAGCTAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp AAGAGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACCACAGAAGACCTTTTTaGTACTGGGGGTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: KRNAIYHTFVESLLWRTNHRRPF*YWGSSS
Trigger: TGAAGATGACCCCCAGTACCAAAAAGGTCTTCTGTG...GTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp TCCTTAGCTTCATTCTTCATAATGCCAAAGAGATCCATGGATATGATTTTCCATAACGCCATAGCCGACTaGGAACATGATCCACTTCAT +
Preference number: 4 (lower is better)
Translates to: SLASFFIMPKRSMDMIFHNAIAD*EHDPLH
Trigger: ATGAAGTGGATCATGTTCCCAGTCGGCTATGGCGTT...ATGGAAAATCATATCCATGGATCTCTTTGGCATTATGAAGAATGAAGCTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp GAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGGGAGAACAAACAGCTTaGGAAGTAAAGGTTGATTAC +
Preference number: 4 (lower is better)
Translates to: EQTAWEVKVDYFLSKDDMGEQTA*EVKVDY
Trigger: GTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCC...CATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp AAGAGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACGTTGAGAGCCTATTGTaGAGAACAAACAGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: KRNAIYHTFVESLLWRTNVESLL*RTNSLG
Trigger: TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAAC...GTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp GCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGAAGTTTTGGTTTTCTaGGTCACAGCTCCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: ALTEYTIVKRNAIYHTFVEVLVF*VTAPKR
Trigger: CCTCTTTGGAGCTGTGACTCAGAAAACCAAAACTTC...AACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR TCA 90 bp GAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTGTCTGTAATCGCTTaGGTTTCAATAGCTACACTA +
Preference number: 4 (lower is better)
Translates to: EQTAWEVKVDYFLSKDDMLSVIA*VSIATL
Trigger: TAGTGTAGCTATTGAAACTCAAGCGATTACAGACAA...CATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000344373.8
CDS-3UTR TCA 90 bp GCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGCAACGGATGTCCATTaGGTTCATTTGGACGTTCAA +
Preference number: 4 (lower is better)
Translates to: ALTEYTIVKRNAIYHTFVATDVH*VHLDVQ
Trigger: TTGAACGTCCAAATGAACTCAATGGACATCCGTTGC...AACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR TCA 90 bp CAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAATTGACACTTCACTATTaGGGGAGGAAAGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: QFTTHLLRAYCGEQTAWELTLHY*GRKVFF
Trigger: AAAGAAAACTTTCCTCCCTCAATAGTGAAGTGTCAA...TTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp TTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCTTGACACTTCACTATTaGGGGAGGAAAGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LRAYCGEQTAWEVKVDYFLTLHY*GRKVFF
Trigger: AAAGAAAACTTTCCTCCCTCAATAGTGAAGTGTCAA...GAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp AGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTCTCTAAACCACTTTTaGTATTGTTTCTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: RNAIYHTFVESLLWRTNSSLNHF*YCFWTC
Trigger: GCAGGTCCAGAAACAATATCAAAAGTGGTTTAGAGA...GCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp TTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACTCTCTAAACCACTTTTaGTATTGTTTCTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: FQGQALTEYTIVKRNAIYSLNHF*YCFWTC
Trigger: GCAGGTCCAGAAACAATATCAAAAGTGGTTTAGAGA...GTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR TCA 90 bp AAGAGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACTTGGGAAGTAAAGGTTaGTTACTTCCTCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: KRNAIYHTFVESLLWRTNLGSKG*LLPLQG
Trigger: TCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAA...GTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp TCCTTAGCTTCATTCTTCATAATGCCAAAGAGATCCATGGATATGATTTTCCATGGGACAAGCATTGACTaGATACACCATAGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SLASFFIMPKRSMDMIFHGTSID*IHHSEE
Trigger: CTCTTCACTATGGTGTATTCAGTCAATGCTTGTCCC...ATGGAAAATCATATCCATGGATCTCTTTGGCATTATGAAGAATGAAGCTAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR TCA 90 bp GCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGGGACAAGCATTGACTaGATACACCATAGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: ALTEYTIVKRNAIYHTFVGTSID*IHHSEE
Trigger: CTCTTCACTATGGTGTATTCAGTCAATGCTTGTCCC...AACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR GCA 90 bp CAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTTAGTCAAGGAAATATTTaGAGTGGTCATGCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: QTAWEVKVDYFLSKDDMFSQGNI*SGHALG
Trigger: ACCCAAAGCATGACCACTGCAAATATTTCCTTGACT...AAACATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp CAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTTATGCAGTCTATATCCTaGGACACATTGACAGTAGAA +
Preference number: 4 (lower is better)
Translates to: QTAWEVKVDYFLSKDDMFMQSIS*DTLTVE
Trigger: TTCTACTGTCAATGTGTCCCAGGATATAGACTGCAT...AAACATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000599900.5
CDS-3UTR CCA 90 bp ACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGAGAGCGACTGCAATTACACATaGTGTGACTCTTGTTCACGT +
Preference number: 4 (lower is better)
Translates to: TEYTIVKRNAIYHTFVESDCNYT*CDSCSR
Trigger: ACGTGAACAAGAGTCACACCATGTGTAATTGCAGTC...GCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CCA 90 bp AGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCGGAGAACAAACAGCTTaGGAAGTAAAGGTTGATTAC +
Preference number: 4 (lower is better)
Translates to: RNAIYHTFVESLLWRTNSGEQTA*EVKVDY
Trigger: GTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCC...GCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp CAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTTGGAGAACAAACAGCTTaGGAAGTAAAGGTTGATTAC +
Preference number: 4 (lower is better)
Translates to: QTAWEVKVDYFLSKDDMFGEQTA*EVKVDY
Trigger: GTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCC...AAACATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp TCCTTAGCTTCATTCTTCATAATGCCAAAGAGATCCATGGATATGATTTTCCATTTACCACACATTTGTTaGGAGCCTATTGTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: SLASFFIMPKRSMDMIFHLPHIC*EPIVEN
Trigger: GTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAA...ATGGAAAATCATATCCATGGATCTCTTTGGCATTATGAAGAATGAAGCTAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR GCA 90 bp AAGAGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAAGTATATCCATGGTTaGAGGTGCAGTGAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: KRNAIYHTFVESLLWRTNKYIHG*RCSECY
Trigger: ATAACACTCACTGCACCTGCAACCATGGATATACTT...GTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR GCA 90 bp CATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATAATGTGAATAGTTTCTaGCCAGATCCAGAAGTATAT +
Preference number: 4 (lower is better)
Translates to: HLLRAYCGEQTAWEVKVDNVNSF*PDPEVY
Trigger: ATATACTTCTGGATCTGGGCAGAAACTATTCACATT...ATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CCA 90 bp GCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGACTGCAATTACACATaGTGTGACTCTTGTTCACGT +
Preference number: 4 (lower is better)
Translates to: ALTEYTIVKRNAIYHTFVDCNYT*CDSCSR
Trigger: ACGTGAACAAGAGTCACACCATGTGTAATTGCAGTC...AACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR TCA 90 bp AAGAGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACTTGACACTTCACTATTaGGGGAGGAAAGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KRNAIYHTFVESLLWRTNLTLHY*GRKVFF
Trigger: AAAGAAAACTTTCCTCCCTCAATAGTGAAGTGTCAA...GTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR GCA 90 bp AGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCAATGTGAATAGTTTCTaGCCAGATCCAGAAGTATAT +
Preference number: 4 (lower is better)
Translates to: RNAIYHTFVESLLWRTNSNVNSF*PDPEVY
Trigger: ATATACTTCTGGATCTGGGCAGAAACTATTCACATT...GCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR TCA 90 bp GCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTTTGTCTGTAATCGCTTaGGTTTCAATAGCTACACTA +
Preference number: 4 (lower is better)
Translates to: ALTEYTIVKRNAIYHTFVLSVIA*VSIATL
Trigger: TAGTGTAGCTATTGAAACTCAAGCGATTACAGACAA...AACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000344373.8
CDS-3UTR TCA 90 bp TCCTTAGCTTCATTCTTCATAATGCCAAAGAGATCCATGGATATGATTTTCCATTTGTCTGTAATCGCTTaGGTTTCAATAGCGTTACAT +
Preference number: 4 (lower is better)
Translates to: SLASFFIMPKRSMDMIFHLSVIA*VSIALH
Trigger: ATGTAACGCTATTGAAACTCAAGCGATTACAGACAA...ATGGAAAATCATATCCATGGATCTCTTTGGCATTATGAAGAATGAAGCTAAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443157.6
CDS-3UTR GCA 90 bp AAGAGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAATGTGAATAGTTTCTaGCCAGATCCAGAAGTATAT +
Preference number: 4 (lower is better)
Translates to: KRNAIYHTFVESLLWRTNNVNSF*PDPEVY
Trigger: ATATACTTCTGGATCTGGGCAGAAACTATTCACATT...GTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR GCA 90 bp ACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGAGAGCAATGTGAATAGTTTCTaGCCAGATCCAGAAGTATAT +
Preference number: 4 (lower is better)
Translates to: TEYTIVKRNAIYHTFVESNVNSF*PDPEVY
Trigger: ATATACTTCTGGATCTGGGCAGAAACTATTCACATT...GCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS CCA 90 bp GCTCTCAGAACAGGCACTTTTCTCCAGCCCACTGGAGACCATGAGTaGCTCCAGGTCCAGCCCTTGGTCCACAAGTTCTCTGTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: ALRTGTFLQPTGDHE*LQVQPLVHKFSVLA
Trigger: AGCCAGAACAGAGAACTTGTGGACCAAGGGCTGGACCTGGAGCCACTCATGGTCTCCAGTGGGCTGGAGAAAAGTGCCTGTTCTGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595472.1
CDS GCA 90 bp TGGTACGGGTATCCCACGCCAGCCAGCCCTGGAAGCTCTCTACTGTaGCGTAAGCCAACCACCTTTCCTAGCTCAAGAAATCCCATGAGA +
Preference number: 5 (lower is better)
Translates to: WYGYPTPASPGSSLL*RKPTTFPSSRNPMR
Trigger: TCTCATGGGATTTCTTGAGCTAGGAAAGGTGGTTGGCTTACGGCACAGTAGAGAGCTTCCAGGGCTGGCTGGCGTGGGATACCCGTACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344373.8
ENST00000595472.1
CDS TCA 90 bp CCACAAGTTCTCTGTTCTGGCTCTGAGCACTCACTTTTGGTTTTCTaGGTCACAGCTCCAAAGAGGCTCAGCAGAAAGCAGAGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: PQVLCSGSEHSLLVF*VTAPKRLSRKQRPG
Trigger: TCCAGGCCTCTGCTTTCTGCTGAGCCTCTTTGGAGCTGTGACTCAGAAAACCAAAAGTGAGTGCTCAGAGCCAGAACAGAGAACTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595472.1
CDS-3UTR CAA 90 bp TTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCTGCCCTCGGTTGTCTTaGAGGAGGTGGTGTCCTGAC +
Preference number: 5 (lower is better)
Translates to: LRAYCGEQTAWEVKVDYFCPRLS*RRWCPD
Trigger: GTCAGGACACCACCTCCTCAAAGACAACCGAGGGCA...GAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000599900.5
CDS-3UTR CAA 90 bp CATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTGCCCTCGGTTGTCTTaGAGGAGGTGGTGTCCTGAC +
Preference number: 5 (lower is better)
Translates to: HLLRAYCGEQTAWEVKVDCPRLS*RRWCPD
Trigger: GTCAGGACACCACCTCCTCAAAGACAACCGAGGGCA...ATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000599900.5
CDS-3UTR CAA 90 bp GGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGAGAGACACGTTCCTTTaGGGTCCAATAGCAGCACTC +
Preference number: 5 (lower is better)
Translates to: GHALGFQGQALTEYTIVKRDTFL*GPIAAL
Trigger: GAGTGCTGCTATTGGACCCAAAAGGAACGTGTCTCT...CTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGCCCCCTCACTGGGTTTaGAGTCAGGACCCATCTTGC +
Preference number: 5 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWPPHWV*SQDPSC
Trigger: GCAAGATGGGTCCTGACTCAAAACCCAGTGAGGGGG...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS TCA 90 bp TTGTCTTTGAGGAGGTGGTGTCGTTACATGTCTCCAAGGGGAATGTaGATAGTTTCTGCCCAGATCCAGAAGTATATCCATGGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: LSLRRWCRYMSPRGM*IVSAQIQKYIHGCR
Trigger: CCTGCAACCATGGATATACTTCTGGATCTGGGCAGAAACTATTCACATTCCCCTTGGAGACATGTAACGACACCACCTCCTCAAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344373.8
CDS-3UTR CAA 90 bp AGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCAATGGCACTGGGACCTaGTGTGTCTCCCTGGATGAT +
Preference number: 5 (lower is better)
Translates to: RAYCGEQTAWEVKVDYFLNGTGT*CVSLDD
Trigger: ATCATCCAGGGAGACACACAAGGTCCCAGTGCCATT...GAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAGTCAGCGTCACAGACTaGGAGAGAGACACGTTCCTT +
Preference number: 5 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGVSVTD*ERDTFL
Trigger: AAGGAACGTGTCTCTCTCCAAGTCTGTGACGCTGAC...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp AGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCCCCCCTCACTGGGTTTaGAGTCAGGACCCATCTTGC +
Preference number: 5 (lower is better)
Translates to: RNAIYHTFVESLLWRTNSPPHWV*SQDPSC
Trigger: GCAAGATGGGTCCTGACTCAAAACCCAGTGAGGGGG...GCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp GAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTCCCCCTCACTGGGTTTaGAGTCAGGACCCATCTTGC +
Preference number: 5 (lower is better)
Translates to: EMQFTTHLLRAYCGEQTAPPHWV*SQDPSC
Trigger: GCAAGATGGGTCCTGACTCAAAACCCAGTGAGGGGG...AGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp GGTCATGCTTTGGGTTTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGTGCAACGGATGTCCATaGAGTTCATTTGGACGTTCA +
Preference number: 5 (lower is better)
Translates to: GHALGFQGQALTEYTIVKCNGCP*SSFGRS
Trigger: TGAACGTCCAAATGAACTCAATGGACATCCGTTGCA...CTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAAACCCAAAGCATGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp CAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTCAGCGTCACAGACTaGGAGAGAGACACGTTCCTT +
Preference number: 5 (lower is better)
Translates to: QFTTHLLRAYCGEQTAWEVSVTD*ERDTFL
Trigger: AAGGAACGTGTCTCTCTCCAAGTCTGTGACGCTGAC...TTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp AGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCATGGAGCACAGCACCTaGGGTTCAGTTCGATCAATC +
Preference number: 5 (lower is better)
Translates to: RAYCGEQTAWEVKVDYFLMEHST*GSVRSI
Trigger: GATTGATCGAACTGAACCCAAGGTGCTGTGCTCCAT...GAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAGAGTCAGGACCCATCTaGCTGGAAAGTGTGTATGTC +
Preference number: 5 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGESGPI*LESVYV
Trigger: GACATACACACTTTCCAGCAAGATGGGTCCTGACTC...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp CAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTTAATGGCACTGGGACCTaGTGTGTCTCCCTGGATGAT +
Preference number: 5 (lower is better)
Translates to: QTAWEVKVDYFLSKDDMFNGTGT*CVSLDD
Trigger: ATCATCCAGGGAGACACACAAGGTCCCAGTGCCATT...AAACATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp AGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCAATGGCACTGGGACCTaGTGTGTCTCCCTGGATGAT +
Preference number: 5 (lower is better)
Translates to: RNAIYHTFVESLLWRTNSNGTGT*CVSLDD
Trigger: ATCATCCAGGGAGACACACAAGGTCCCAGTGCCATT...GCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp CATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATAGAGACACGTTCCTTTaGGGTCCAATAGCAGCACTC +
Preference number: 5 (lower is better)
Translates to: HLLRAYCGEQTAWEVKVDRDTFL*GPIAAL
Trigger: GAGTGCTGCTATTGGACCCAAAAGGAACGTGTCTCT...ATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp TACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAAGAGACACGTTCCTTTaGGGTCCAATAGCAGCACTC +
Preference number: 5 (lower is better)
Translates to: YHTFVESLLWRTNSLGSKRDTFL*GPIAAL
Trigger: GAGTGCTGCTATTGGACCCAAAAGGAACGTGTCTCT...TTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp CAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAATGGAGCACAGCACCTaGGGTTCAGTTCGATCAATC +
Preference number: 5 (lower is better)
Translates to: QFTTHLLRAYCGEQTAWEMEHST*GSVRSI
Trigger: GATTGATCGAACTGAACCCAAGGTGCTGTGCTCCAT...TTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp GAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGATGGAGCACAGCACCTaGGGTTCAGTTCGATCAATC +
Preference number: 5 (lower is better)
Translates to: EQTAWEVKVDYFLSKDDMMEHST*GSVRSI
Trigger: GATTGATCGAACTGAACCCAAGGTGCTGTGCTCCAT...CATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp TCCTTAGCTTCATTCTTCATAATGCCAAAGAGATCCATGGATATGATTTTCCATCCCCCTCACTGGGTTTaGAGTCAGGACCCATCTTGC +
Preference number: 5 (lower is better)
Translates to: SLASFFIMPKRSMDMIFHPPHWV*SQDPSC
Trigger: GCAAGATGGGTCCTGACTCAAAACCCAGTGAGGGGG...ATGGAAAATCATATCCATGGATCTCTTTGGCATTATGAAGAATGAAGCTAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp AAGAGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACTGCCCTCGGTTGTCTTaGAGGAGGTGGTGTCGTTAC +
Preference number: 5 (lower is better)
Translates to: KRNAIYHTFVESLLWRTNCPRLS*RRWCRY
Trigger: GTAACGACACCACCTCCTCAAAGACAACCGAGGGCA...GTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344373.8
CDS TCA 90 bp TCTTTGAGGAGGTGGTGTCCTGACAGGTGTTCTCATTGGAATTACTaGATTGTTCATTCCCAGAATGCAGTCTATATCCTGGGACACATT +
Preference number: 5 (lower is better)
Translates to: SLRRWCPDRCSHWNY*IVHSQNAVYILGHI
Trigger: AATGTGTCCCAGGATATAGACTGCATTCTGGGAATGAACAATTCAGTAATTCCAATGAGAACACCTGTCAGGACACCACCTCCTCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000599900.5
CDS TCA 90 bp ACCTTGTGTGTCTCCCTGGATGATGTCACTGCAACGGATGTCCATTaGGTTCATTTGGACGTTCAAGTTGAATGTCTTTCTTTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: TLCVSLDDVTATDVH*VHLDVQVECLSFFR
Trigger: TCTGAAGAAAGAAAGACATTCAACTTGAACGTCCAAATGAACTCAATGGACATCCGTTGCAGTGACATCATCCAGGGAGACACACAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp CATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTTTGTCCACAATCTTTaGCAGCTCTTTCCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: HLLRAYCGEQTAWEVKVDFVHNL*QLFPAL
Trigger: GAGGGCAGGAAAGAGCTGCAAAAGATTGTGGACAAA...ATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000344373.8
CDS-3UTR CAA 90 bp CAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTTGAGTCAGGACCCATCTaGCTGGAAAGTGTGTATGTC +
Preference number: 5 (lower is better)
Translates to: QTAWEVKVDYFLSKDDMFESGPI*LESVYV
Trigger: GACATACACACTTTCCAGCAAGATGGGTCCTGACTC...AAACATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGATTCCAGGGACAAGCATaGACTGAATACACCATAGTG +
Preference number: 5 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGFQGQA*TEYTIV
Trigger: CACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAA...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp AGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCAGTGGGACTAAGAACTaGAGGAAAAGGACCTCTTCA +
Preference number: 5 (lower is better)
Translates to: RAYCGEQTAWEVKVDYFLSGTKN*RKRTSS
Trigger: TGAAGAGGTCCTTTTCCTCAAGTTCTTAGTCCCACT...GAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS CCA 90 bp TCTCCCTGGATGATGTCACTGCAACGGATGTCCATTGAGTTCATTTaGACGTTCAAGTTGAATGTCTTTCTTTCTTCAGAGCAATTGTCT +
Preference number: 5 (lower is better)
Translates to: SPWMMSLQRMSIEFI*TFKLNVFLSSEQLS
Trigger: AGACAATTGCTCTGAAGAAAGAAAGACATTCAACTTGAACGTCCAAATGAACTCAATGGACATCCGTTGCAGTGACATCATCCAGGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp CAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTTTTTGTCCACAATCTTTaGCAGCTCTTTCCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: QTAWEVKVDYFLSKDDMFFVHNL*QLFPAL
Trigger: GAGGGCAGGAAAGAGCTGCAAAAGATTGTGGACAAA...AAACATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000344373.8
CDS-3UTR CAA 90 bp TTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCTGCAACGGATGTCCATaGAGTTCATTTGGACGTTCA +
Preference number: 5 (lower is better)
Translates to: LRAYCGEQTAWEVKVDYFCNGCP*SSFGRS
Trigger: TGAACGTCCAAATGAACTCAATGGACATCCGTTGCA...GAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp GCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTAATGGCACTGGGACCTaGTGTGTCTCCCTGGATGAT +
Preference number: 5 (lower is better)
Translates to: ALTEYTIVKRNAIYHTFVNGTGT*CVSLDD
Trigger: ATCATCCAGGGAGACACACAAGGTCCCAGTGCCATT...AACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp TCCTTAGCTTCATTCTTCATAATGCCAAAGAGATCCATGGATATGATTTTCCATGTCAGCGTCACAGACTaGGAGAGAGACACGTTCCTT +
Preference number: 5 (lower is better)
Translates to: SLASFFIMPKRSMDMIFHVSVTD*ERDTFL
Trigger: AAGGAACGTGTCTCTCTCCAAGTCTGTGACGCTGAC...ATGGAAAATCATATCCATGGATCTCTTTGGCATTATGAAGAATGAAGCTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp ACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGAGAGCGAGTCAGGACCCATCTaGCTGGAAAGTGTGTATGTC +
Preference number: 5 (lower is better)
Translates to: TEYTIVKRNAIYHTFVESESGPI*LESVYV
Trigger: GACATACACACTTTCCAGCAAGATGGGTCCTGACTC...GCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp TACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAATTCCAGGGACAAGCATaGACTGAATACACCATAGTG +
Preference number: 5 (lower is better)
Translates to: YHTFVESLLWRTNSLGSKFQGQA*TEYTIV
Trigger: CACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAA...TTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp CATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTTCCAGGGACAAGCATaGACTGAATACACCATAGTG +
Preference number: 5 (lower is better)
Translates to: HLLRAYCGEQTAWEVKVDFQGQA*TEYTIV
Trigger: CACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAA...ATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGAGTGGGACTAAGAACTaGAGGAAAAGGACCTCTTCA +
Preference number: 5 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWSGTKN*RKRTSS
Trigger: TGAAGAGGTCCTTTTCCTCAAGTTCTTAGTCCCACT...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGAAGTGACTCAAATTaGTCCACAATCTTTTGCAGC +
Preference number: 5 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGRSDSN*STIFCS
Trigger: GCTGCAAAAGATTGTGGACAAATTTGAGTCACTTCT...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000344373.8
CDS-3UTR CAA 90 bp AGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTGCAACGGATGTCCATaGAGTTCATTTGGACGTTCA +
Preference number: 5 (lower is better)
Translates to: RNAIYHTFVESLLWRTNSCNGCP*SSFGRS
Trigger: TGAACGTCCAAATGAACTCAATGGACATCCGTTGCA...GCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp GCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTATGGAGCACAGCACCTaGGGTTCAGTTCGATCAATC +
Preference number: 5 (lower is better)
Translates to: ALTEYTIVKRNAIYHTFVMEHST*GSVRSI
Trigger: GATTGATCGAACTGAACCCAAGGTGCTGTGCTCCAT...AACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp TTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCAAACCACTTTTGATATaGTTTCTGGACCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LRAYCGEQTAWEVKVDYFKPLLI*FLDLLA
Trigger: AGCCAGCAGGTCCAGAAACAATATCAAAAGTGGTTT...GAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp CATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATAAACCACTTTTGATATaGTTTCTGGACCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: HLLRAYCGEQTAWEVKVDKPLLI*FLDLLA
Trigger: AGCCAGCAGGTCCAGAAACAATATCAAAAGTGGTTT...ATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp GCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGAGTCAGGACCCATCTaGCTGGAAAGTGTGTATGTC +
Preference number: 5 (lower is better)
Translates to: ALTEYTIVKRNAIYHTFVESGPI*LESVYV
Trigger: GACATACACACTTTCCAGCAAGATGGGTCCTGACTC...AACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGATTTACCACACATTTGTaGAGAGCCTATTGTGGAGAA +
Preference number: 5 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGFTTHL*RAYCGE
Trigger: TTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAA...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGAAGTCAAGGAAATATTaGCAGTGGTCATGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWKSRKY*QWSCFG
Trigger: CCCAAAGCATGACCACTGCAAATATTTCCTTGACTT...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp GAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTAGTGGGACTAAGAACTaGAGGAAAAGGACCTCTTCA +
Preference number: 5 (lower is better)
Translates to: EMQFTTHLLRAYCGEQTASGTKN*RKRTSS
Trigger: TGAAGAGGTCCTTTTCCTCAAGTTCTTAGTCCCACT...AGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAATTGTCTGTAATCGCTaGAGTTTCAATAGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGIVCNR*SFNSWE
Trigger: TTCCCAGCTATTGAAACTCAAGCGATTACAGACAAT...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599900.5
CDS-3UTR CAA 90 bp ACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGAGAGCTGCAACGGATGTCCATaGAGTTCATTTGGACGTTCA +
Preference number: 5 (lower is better)
Translates to: TEYTIVKRNAIYHTFVESCNGCP*SSFGRS
Trigger: TGAACGTCCAAATGAACTCAATGGACATCCGTTGCA...GCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp GAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTAAACCACTTTTGATATaGTTTCTGGACCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: EMQFTTHLLRAYCGEQTAKPLLI*FLDLLA
Trigger: AGCCAGCAGGTCCAGAAACAATATCAAAAGTGGTTT...AGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp TTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCTAAACCACTTTaGATATTGTTTCTGGACCTG +
Preference number: 5 (lower is better)
Translates to: LRAYCGEQTAWEVKVDYFLSKPL*ILFLDL
Trigger: CAGGTCCAGAAACAATATCAAAAGTGGTTTAGAGAG...GAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp TACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAACTCTCTAAACCACTTTaGATATTGTTTCTGGACCTG +
Preference number: 5 (lower is better)
Translates to: YHTFVESLLWRTNSLGSKLSKPL*ILFLDL
Trigger: CAGGTCCAGAAACAATATCAAAAGTGGTTTAGAGAG...TTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGCTCTCTAAACCACTTTaGATATTGTTTCTGGACCTG +
Preference number: 5 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWLSKPL*ILFLDL
Trigger: CAGGTCCAGAAACAATATCAAAAGTGGTTTAGAGAG...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGCAATTTACCACACATTaGTTGAGAGCCTATTGTGGA +
Preference number: 5 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWQFTTH*LRAYCG
Trigger: TCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp CAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAACAATTTACCACACATTaGTTGAGAGCCTATTGTGGA +
Preference number: 5 (lower is better)
Translates to: QFTTHLLRAYCGEQTAWEQFTTH*LRAYCG
Trigger: TCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG...TTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp AGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCAAGTCAAGGAAATATTaGCAGTGGTCATGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: RNAIYHTFVESLLWRTNSKSRKY*QWSCFG
Trigger: CCCAAAGCATGACCACTGCAAATATTTCCTTGACTT...GCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp GCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAATTGTCTGTAATCGCTaGAGTTTCAATAGCGTTACA +
Preference number: 5 (lower is better)
Translates to: AIYHTFVESLLWRTNSLGIVCNR*SFNSVT
Trigger: TGTAACGCTATTGAAACTCAAGCGATTACAGACAAT...TCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443157.6
CDS CCA 90 bp ATTGGAATTACTGAATTGTTCATTCCCAGAATGCAGTCTATATCCTaGGACACATTGACAGTAGAAACTTCCTTCGACATTGTAACACAC +
Preference number: 5 (lower is better)
Translates to: IGITELFIPRMQSIS*DTLTVETSFDIVTH
Trigger: GTGTGTTACAATGTCGAAGGAAGTTTCTACTGTCAATGTGTCCCAGGATATAGACTGCATTCTGGGAATGAACAATTCAGTAATTCCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000599900.5
CDS-3UTR CAA 90 bp TTGAGAGCCTATTGTGGAGAACAAACAGCTTGGGAAGTAAAGGTTGATTACTTCAGCTACACTATCGTTTaGGATTTTCAGGACTTTTTG +
Preference number: 5 (lower is better)
Translates to: LRAYCGEQTAWEVKVDYFSYTIV*DFQDFL
Trigger: CAAAAAGTCCTGAAAATCCAAAACGATAGTGTAGCT...GAAGTAATCAACCTTTACTTCCCAAGCTGTTTGTTCTCCACAATAGGCTCTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000344373.8
CDS-3UTR CAA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGATTGTCTGTAATCGCTaGAGTTTCAATAGCTACACT +
Preference number: 5 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWIVCNR*SFNSYT
Trigger: AGTGTAGCTATTGAAACTCAAGCGATTACAGACAAT...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000344373.8
CDS-3UTR CAA 90 bp ATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTGGAGAGTTCAGATACACTaGATCTTTCTTATCCATCTC +
Preference number: 5 (lower is better)
Translates to: MQFTTHLLRAYCGEQTAWRVQIH*IFLIHL
Trigger: GAGATGGATAAGAAAGATCAAGTGTATCTGAACTCT...CCAAGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp ACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGAGAGCAAACCACTTTTGATATaGTTTCTGGACCTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: TEYTIVKRNAIYHTFVESKPLLI*FLDLLA
Trigger: AGCCAGCAGGTCCAGAAACAATATCAAAAGTGGTTT...GCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp CAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTTCTCTCTAAACCACTTTaGATATTGTTTCTGGACCTG +
Preference number: 5 (lower is better)
Translates to: QTAWEVKVDYFLSKDDMFLSKPL*ILFLDL
Trigger: CAGGTCCAGAAACAATATCAAAAGTGGTTTAGAGAG...AAACATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp CAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTTTTTACCACACATTTGTaGAGAGCCTATTGTGGAGAA +
Preference number: 5 (lower is better)
Translates to: QTAWEVKVDYFLSKDDMFFTTHL*RAYCGE
Trigger: TTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAA...AAACATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp GAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTTTTACCACACATTTGTaGAGAGCCTATTGTGGAGAA +
Preference number: 5 (lower is better)
Translates to: EMQFTTHLLRAYCGEQTAFTTHL*RAYCGE
Trigger: TTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAA...AGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp TTCCAGGGACAAGCATTGACTGAATACACCATAGTGAAGAGAAATGCAATTTACCAATTTACCACACATTaGTTGAGAGCCTATTGTGGA +
Preference number: 5 (lower is better)
Translates to: FQGQALTEYTIVKRNAIYQFTTH*LRAYCG
Trigger: TCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG...GTAAATTGCATTTCTCTTCACTATGGTGTATTCAGTCAATGCTTGTCCCTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp ACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGAGAGCAAGTCAAGGAAATATTaGCAGTGGTCATGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: TEYTIVKRNAIYHTFVESKSRKY*QWSCFG
Trigger: CCCAAAGCATGACCACTGCAAATATTTCCTTGACTT...GCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp GAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTAGAGTTCAGATACACTaGATCTTTCTTATCCATCTC +
Preference number: 5 (lower is better)
Translates to: EMQFTTHLLRAYCGEQTARVQIH*IFLIHL
Trigger: GAGATGGATAAGAAAGATCAAGTGTATCTGAACTCT...AGCTGTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp CAAACAGCTTGGGAAGTAAAGGTTGATTACTTCCTCTCCAAGGATGATATGTTTAGAGTTCAGATACACTaGATCTTTCTTATCCATCTC +
Preference number: 5 (lower is better)
Translates to: QTAWEVKVDYFLSKDDMFRVQIH*IFLIHL
Trigger: GAGATGGATAAGAAAGATCAAGTGTATCTGAACTCT...AAACATATCATCCTTGGAGAGGAAGTAATCAACCTTTACTTCCCAAGCTGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS-3UTR CAA 90 bp ACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGAGAGCTTTACCACACATTTGTaGAGAGCCTATTGTGGAGAA +
Preference number: 5 (lower is better)
Translates to: TEYTIVKRNAIYHTFVESFTTHL*RAYCGE
Trigger: TTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAA...GCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp AAGAGAAATGCAATTTACCACACATTTGTTGAGAGCCTATTGTGGAGAACAAACAGCTACACTATCGTTTaGGATTTTCAGGACTTTTTG +
Preference number: 5 (lower is better)
Translates to: KRNAIYHTFVESLLWRTNSYTIV*DFQDFL
Trigger: CAAAAAGTCCTGAAAATCCAAAACGATAGTGTAGCT...GTTTGTTCTCCACAATAGGCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000344373.8
CDS-3UTR CAA 90 bp ACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGAGAGCATTGTCTGTAATCGCTaGAGTTTCAATAGCTACACT +
Preference number: 5 (lower is better)
Translates to: TEYTIVKRNAIYHTFVESIVCNR*SFNSYT
Trigger: AGTGTAGCTATTGAAACTCAAGCGATTACAGACAAT...GCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000344373.8
CDS-3UTR CAA 90 bp ACTGAATACACCATAGTGAAGAGAAATGCAATTTACCACACATTTGTTGAGAGCAGAGTTCAGATACACTaGATCTTTCTTATCCATCTC +
Preference number: 5 (lower is better)
Translates to: TEYTIVKRNAIYHTFVESRVQIH*IFLIHL
Trigger: GAGATGGATAAGAAAGATCAAGTGTATCTGAACTCT...GCTCTCAACAAATGTGTGGTAAATTGCATTTCTCTTCACTATGGTGTATTCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
CDS-3UTR CAA 90 bp TCCTTAGCTTCATTCTTCATAATGCCAAAGAGATCCATGGATATGATTTTCCATCAATTTACCACACATTaGTTGAGAGCCTATTGTGGA +
Preference number: 5 (lower is better)
Translates to: SLASFFIMPKRSMDMIFHQFTTH*LRAYCG
Trigger: TCCACAATAGGCTCTCAACAAATGTGTGGTAAATTG...ATGGAAAATCATATCCATGGATCTCTTTGGCATTATGAAGAATGAAGCTAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS TCA 72 bp GCCTCCACTCACCTCTTTCCTGCCCTCGGTTGTCTTTaGGGAGGTGGTGTCCTGACAGGTGTTCTCATTGGA +
Preference number: 6 (lower is better)
Translates to: ASTHLFPALGCL*GGGVLTGVLIG
Trigger: TCCAATGAGAACACCTGTCAGGACACCACCTCCTCAAAGACAACCGAGGGCAGGAAAGAGGTGAGTGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599900.5
CDS CAA 90 bp GTACTGGGGGTCATCTTCACGTGCTGGAAAGTCAGCGTCACAGACTaGGAGAGAGACACGTTCCTTTTGGGTCCAATAGCAGCACTCACA +
Preference number: 6 (lower is better)
Translates to: VLGVIFTCWKVSVTD*ERDTFLLGPIAALT
Trigger: TGTGAGTGCTGCTATTGGACCCAAAAGGAACGTGTCTCTCTCCAAGTCTGTGACGCTGACTTTCCAGCACGTGAAGATGACCCCCAGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS TCA 72 bp TCCAGCCCTTGGTCCACAAGTTCTCTGTTCTGGCTCTaGGCACTCACTTTTGGTTTTCTGAGTCACAGCTCC +
Preference number: 6 (lower is better)
Translates to: SSPWSTSSLFWL*ALTFGFLSHSS
Trigger: GGAGCTGTGACTCAGAAAACCAAAAGTGAGTGCTCAGAGCCAGAACAGAGAACTTGTGGACCAAGGGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595472.1
CDS CCA 72 bp AATGGCCACAGTCACAGCGGGAACGCCATAGCCGACTaGGAACATGATCCACTTCATGAGTCTATTGATGCT +
Preference number: 6 (lower is better)
Translates to: NGHSHSGNAIAD*EHDPLHESIDA
Trigger: AGCATCAATAGACTCATGAAGTGGATCATGTTCCCAGTCGGCTATGGCGTTCCCGCTGTGACTGTGGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS TCA 72 bp AGGCAATGGCACTGGGACCTTGTGTGTCTCCCTGGATaGTGTCACTGCAACGGATGTCCATTGAGTTCATTT +
Preference number: 6 (lower is better)
Translates to: RQWHWDLVCLPG*CHCNGCPLSSF
Trigger: AAATGAACTCAATGGACATCCGTTGCAGTGACATCATCCAGGGAGACACACAAGGTCCCAGTGCCATTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS TCA 72 bp CTCTGTTCTGGCTCTGAGCACTCACTTTTGGTTTTCTaGGTCACAGCTCCAAAGAGGCTCAGCAGAAAGCAG +
Preference number: 6 (lower is better)
Translates to: LCSGSEHSLLVF*VTAPKRLSRKQ
Trigger: CTGCTTTCTGCTGAGCCTCTTTGGAGCTGTGACTCAGAAAACCAAAAGTGAGTGCTCAGAGCCAGAACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595472.1
CDS CCA 72 bp ATAAAGGCAATGGCACTGGGACCTTGTGTGTCTCCCTaGATGATGTCACTGCAACGGATGTCCATTGAGTTC +
Preference number: 6 (lower is better)
Translates to: IKAMALGPCVSP*MMSLQRMSIEF
Trigger: GAACTCAATGGACATCCGTTGCAGTGACATCATCCAGGGAGACACACAAGGTCCCAGTGCCATTGCCTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS CAA 72 bp GTCATCTTCACGTGCTGGAAAGTCAGCGTCACAGACTaGGAGAGAGACACGTTCCTTTTGGGTCCAATAGCA +
Preference number: 6 (lower is better)
Translates to: VIFTCWKVSVTD*ERDTFLLGPIA
Trigger: TGCTATTGGACCCAAAAGGAACGTGTCTCTCTCCAAGTCTGTGACGCTGACTTTCCAGCACGTGAAGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS GCA 72 bp CAGCTGACTCATGAAATTGCTATCAGAAAAGCAAACTaGTTCCCCTCTTTCGCCATCAGACTCATGGTTCTG +
Preference number: 6 (lower is better)
Translates to: QLTHEIAIRKAN*FPSFAIRLMVL
Trigger: CAGAACCATGAGTCTGATGGCGAAAGAGGGGAAGCAGTTTGCTTTTCTGATAGCAATTTCATGAGTCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595472.1
CDS CAA 90 bp TTAAGCAAACAAATAATGAAACACAGGAGCAAGCCTTCCCAAATATaGCTCTCAGAACAGGCACTTTTCTCCAGCCCACTGGAGACCATG +
Preference number: 6 (lower is better)
Translates to: LSKQIMKHRSKPSQI*LSEQALFSSPLETM
Trigger: CATGGTCTCCAGTGGGCTGGAGAAAAGTGCCTGTTCTGAGAGCAATATTTGGGAAGGCTTGCTCCTGTGTTTCATTATTTGTTTGCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595472.1
CDS TCA 72 bp GTCTCCCTGGATGATGTCACTGCAACGGATGTCCATTaGGTTCATTTGGACGTTCAAGTTGAATGTCTTTCT +
Preference number: 6 (lower is better)
Translates to: VSLDDVTATDVH*VHLDVQVECLS
Trigger: AGAAAGACATTCAACTTGAACGTCCAAATGAACTCAATGGACATCCGTTGCAGTGACATCATCCAGGGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS TCA 72 bp AGGTGGTGTCCTGACAGGTGTTCTCATTGGAATTACTaGATTGTTCATTCCCAGAATGCAGTCTATATCCTG +
Preference number: 6 (lower is better)
Translates to: RWCPDRCSHWNY*IVHSQNAVYIL
Trigger: CAGGATATAGACTGCATTCTGGGAATGAACAATTCAGTAATTCCAATGAGAACACCTGTCAGGACACCACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000599900.5
CDS CAA 72 bp TTCATTCCCAGAATGCAGTCTATATCCTGGGACACATaGACAGTAGAAACTTCCTTCGACATTGTAACACAC +
Preference number: 6 (lower is better)
Translates to: FIPRMQSISWDT*TVETSFDIVTH
Trigger: GTGTGTTACAATGTCGAAGGAAGTTTCTACTGTCAATGTGTCCCAGGATATAGACTGCATTCTGGGAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000599900.5
CDS CAA 90 bp ACTGAATTGTTCATTCCCAGAATGCAGTCTATATCCTGGGACACATaGACAGTAGAAACTTCCTTCGACATTGTAACACACAGCGTTAAA +
Preference number: 6 (lower is better)
Translates to: TELFIPRMQSISWDT*TVETSFDIVTHSVK
Trigger: TTTAACGCTGTGTGTTACAATGTCGAAGGAAGTTTCTACTGTCAATGTGTCCCAGGATATAGACTGCATTCTGGGAATGAACAATTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000599900.5
CDS CCA 72 bp ACTGAATTGTTCATTCCCAGAATGCAGTCTATATCCTaGGACACATTGACAGTAGAAACTTCCTTCGACATT +
Preference number: 6 (lower is better)
Translates to: TELFIPRMQSIS*DTLTVETSFDI
Trigger: AATGTCGAAGGAAGTTTCTACTGTCAATGTGTCCCAGGATATAGACTGCATTCTGGGAATGAACAATTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000599900.5
CDS CAA 72 bp CAACGGATGTCCATTGAGTTCATTTGGACGTTCAAGTaGAATGTCTTTCTTTCTTCAGAGCAATTGTCTGTA +
Preference number: 6 (lower is better)
Translates to: QRMSIEFIWTFK*NVFLSSEQLSV
Trigger: TACAGACAATTGCTCTGAAGAAAGAAAGACATTCAACTTGAACGTCCAAATGAACTCAATGGACATCCGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253673.6
ENST00000344373.8
ENST00000443157.6
ENST00000599900.5
CDS CCA 72 bp ACACACAGCGTTAAATCCACAATATACACTATAGGGTaGTGTACATTCATTAATGTCGTTACATGTCTCCAA +
Preference number: 6 (lower is better)
Translates to: THSVKSTIYTIG*CTFINVVTCLQ
Trigger: TTGGAGACATGTAACGACATTAATGAATGTACACCACCCTATAGTGTATATTGTGGATTTAACGCTGTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253673.6
ENST00000599900.5