RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRE2 (Homo sapiens)

Ensembl gene IDs: ENSG00000127507

Ensembl transcript IDs: ENST00000315576.8, ENST00000360222.8, ENST00000392962.3, ENST00000392965.7, ENST00000594076.5, ENST00000594294.5, ENST00000595208.5, ENST00000595839.5, ENST00000596991.6, ENST00000598500.1, ENST00000599423.5, ENST00000601345.5

Found 498 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCAGTGCAAGAAGCTCCAGCTCTGGGACCAGTTGGATGGGGTTTaGATCCTAACCCTGGCTCCTGTTAGTGGGATGGCCTCAGGCAAG +
Preference number: 1 (lower is better)
Translates to: GQCKKLQLWDQLDGV*ILTLAPVSGMASGK
Trigger: CTTGCCTGAGGCCATCCCACTAACAGGAGCCAGGGTTAGGATTCAAACCCCATCCAACTGGTCCCAGAGCTGGAGCTTCTTGCACTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR TCA 90 bp TGGTCTCTTGAACCAGCCTTAGGCATGGAGGTTGAGGATCAGGAGTaGCTTGAGGGTACTGACTGGCAGAGCAGGAGCCCCGTTATTTTG +
Preference number: 1 (lower is better)
Translates to: WSLEPALGMEVEDQE*LEGTDWQSRSPVIL
Trigger: CAAAATAACGGGGCTCCTGCTCTGCCAGTCAGTACCCTCAAGTCACTCCTGATCCTCAACCTCCATGCCTAAGGCTGGTTCAAGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR GCA 90 bp ACACTCATAGGGACCCACATGTTCCAAGCCTCCAGCTGTGTGTTCTaGTTCCTCAAGCAGCAGCTGACTCTGATATTCCCCATCTCACCT +
Preference number: 1 (lower is better)
Translates to: TLIGTHMFQASSCVF*FLKQQLTLIFPISP
Trigger: AGGTGAGATGGGGAATATCAGAGTCAGCTGCTGCTTGAGGAAGCAGAACACACAGCTGGAGGCTTGGAACATGTGGGTCCCTATGAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR TCA 90 bp CTTCAGAGTGACCAAGATATGGGCCACAGCTGGCCGTCCATATGCTaGGAGTTTGATGAGCACATTGCAGGGCATGGAAGATTTCCGGTT +
Preference number: 1 (lower is better)
Translates to: LQSDQDMGHSWPSIC*EFDEHIAGHGRFPV
Trigger: AACCGGAAATCTTCCATGCCCTGCAATGTGCTCATCAAACTCTCAGCATATGGACGGCCAGCTGTGGCCCATATCTTGGTCACTCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR GCA 90 bp CTTTCAGATGTTGTCGGTATGAAAGTCCTCTTAGGCTCGTTTTCCTaGTTCATTTTAAGATTTGGAGGAGTCTTTGTAGGAAGGAGAGGC +
Preference number: 1 (lower is better)
Translates to: LSDVVGMKVLLGSFS*FILRFGGVFVGRRG
Trigger: GCCTCTCCTTCCTACAAAGACTCCTCCAAATCTTAAAATGAAGCAGGAAAACGAGCCTAAGAGGACTTTCATACCGACAACATCTGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR GCA 90 bp CTCACCTTAGCAGTCTATATCAAGCAAAGGGCACGCAGAATCCCATaGACCCATCATGTATGTAATAAAAGGCAGATATTATGTGGTCTC +
Preference number: 1 (lower is better)
Translates to: LTLAVYIKQRARRIP*THHVCNKRQILCGL
Trigger: GAGACCACATAATATCTGCCTTTTATTACATACATGATGGGTGCATGGGATTCTGCGTGCCCTTTGCTTGATATAGACTGCTAAGGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR TCA 90 bp AACCTGAACATCATGGTCTGGAAACTATGGGCAGTGAGTCAAATCTaGCCCACCATCTGTTTCTGTACAGCTAAGAATAGTTTTTACATT +
Preference number: 1 (lower is better)
Translates to: NLNIMVWKLWAVSQI*PTICFCTAKNSFYI
Trigger: AATGTAAAAACTATTCTTAGCTGTACAGAAACAGATGGTGGGTCAGATTTGACTCACTGCCCATAGTTTCCAGACCATGATGTTCAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR GCA 90 bp ATTTCTGTTCAAGGAAAGCAGATAACAGACAGGGTTAAGGGCATTTaGTTGGAATATTTAGGAGTTTTGCAGGTCATTCCTTTGAAATGG +
Preference number: 1 (lower is better)
Translates to: ISVQGKQITDRVKGI*LEYLGVLQVIPLKW
Trigger: CCATTTCAAAGGAATGACCTGCAAAACTCCTAAATATTCCAAGCAAATGCCCTTAACCCTGTCTGTTATCTGCTTTCCTTGAACAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR-3UTR GCA 90 bp TGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTAGGCAGAGCGAGAGCTaGAGATGCAGTGAGGTGCTG +
Preference number: 2 (lower is better)
Translates to: WSTAPCVRFDQLPRGRGGRQSES*RCSEVL
Trigger: CAGCACCTCACTGCATCTGCAGCTCTCGCTCTGCCT...ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
3UTR-3UTR GCA 90 bp ATGGCGCAGACAGGTCCAAGGAAGCCCCATATAAATCCCTTTTCTGGTTGGAGCAGGCAGAGCGAGAGCTaGAGATGCAGTGAGGTGCTG +
Preference number: 2 (lower is better)
Translates to: MAQTGPRKPHINPFSGWSRQSES*RCSEVL
Trigger: CAGCACCTCACTGCATCTGCAGCTCTCGCTCTGCCT...GCTCCAACCAGAAAAGGGATTTATATGGGGCTTCCTTGGACCTGTCTGCGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595208.5
3UTR CAA 90 bp TGGGCCACAGCTGGCCGTCCATATGCTGAGAGTTTGATGAGCACATaGCAGGGCATGGAAGATTTCCGGTTTCTGCAGGAATTGAATGCC +
Preference number: 2 (lower is better)
Translates to: WATAGRPYAESLMST*QGMEDFRFLQELNA
Trigger: GGCATTCAATTCCTGCAGAAACCGGAAATCTTCCATGCCCTGCAATGTGCTCATCAAACTCTCAGCATATGGACGGCCAGCTGTGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR CAA 90 bp GTGACCAAGATATGGGCCACAGCTGGCCGTCCATATGCTGAGAGTTaGATGAGCACATTGCAGGGCATGGAAGATTTCCGGTTTCTGCAG +
Preference number: 2 (lower is better)
Translates to: VTKIWATAGRPYAES*MSTLQGMEDFRFLQ
Trigger: CTGCAGAAACCGGAAATCTTCCATGCCCTGCAATGTGCTCATCAAACTCTCAGCATATGGACGGCCAGCTGTGGCCCATATCTTGGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR CAA 90 bp CTGTACACATGGCTGGCAAAGAGAAGGGAACTTGGAGCCGCCATTTaGGACATGCCTAGTCTAGGTAGCTTTTTCCTATTGGCACAGCTG +
Preference number: 2 (lower is better)
Translates to: LYTWLAKRRELGAAI*DMPSLGSFFLLAQL
Trigger: CAGCTGTGCCAATAGGAAAAAGCTACCTAGACTAGGCATGTCCAAAATGGCGGCTCCAAGTTCCCTTCTCTTTGCCAGCCATGTGTACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR-3UTR GCA 90 bp ACTATGTTGCCTGCTTTTTACTGTACACATGGCTGGCAAAGAGAAGGGAACTTGCTTGAGCCATCCTCCTaGCTCACCCTCCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: TMLPAFYCTHGWQREGNLLEPSS*LTLPKC
Trigger: GCACTTTGGGAGGGTGAGGCAGGAGGATGGCTCAAG...CAAGTTCCCTTCTCTTTGCCAGCCATGTGTACAGTAAAAAGCAGGCAACATAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR-3UTR CCA 90 bp TGCCGGCATTCACCCGTGGAAGCTTCCAGCTTGCTTGTCTATGTCTGCAGCTCGGTCATTCCTTTGAAATaGAATTTGTTGCACATCCCC +
Preference number: 2 (lower is better)
Translates to: CRHSPVEASSLLVYVCSSVIPLK*NLLHIP
Trigger: GGGGATGTGCAACAAATTCCATTTCAAAGGAATGAC...CGAGCTGCAGACATAGACAAGCAAGCTGGAAGCTTCCACGGGTGAATGCCGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR-3UTR TCA 90 bp GCCTGCGGATTGCCTGAGCTCAGGAGATTAAGACCTGAGCCTGGGCAGCATAGTATCTTATTATGCAAATaGGCTTTGGCTGACACTATG +
Preference number: 2 (lower is better)
Translates to: ACGLPELRRLRPEPGQHSILLCK*ALADTM
Trigger: CATAGTGTCAGCCAAAGCTCATTTGCATAATAAGAT...ACTATGCTGCCCAGGCTCAGGTCTTAATCTCCTGAGCTCAGGCAATCCGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR-3UTR GCA 90 bp GTGTGGTGGTACACACCTGTAGTTTCAAATACCTGGAGGGGGACTGAGGCAGGAAGGGTTAAGGGCATTTaGTTGGAATATTTAGGAGTT +
Preference number: 2 (lower is better)
Translates to: VWWYTPVVSNTWRGTEAGRVKGI*LEYLGV
Trigger: AACTCCTAAATATTCCAAGCAAATGCCCTTAACCCT...TCCTGCCTCAGTCCCCCTCCAGGTATTTGAAACTACAGGTGTGTACCACCACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR CAA 90 bp TCATTGAGCTTATACGGACAGGCACAGAGCAGTGAAAAATGTGAGTaGCACTGGGAAATGTTCCCAGCTGAGTTGACAAAGCAATGCTCT +
Preference number: 2 (lower is better)
Translates to: SLSLYGQAQSSEKCE*HWEMFPAELTKQCS
Trigger: AGAGCATTGCTTTGTCAACTCAGCTGGGAACATTTCCCAGTGCAACTCACATTTTTCACTGCTCTGTGCCTGTCCGTATAAGCTCAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR-3UTR GCA 90 bp TACACATGGCTGGCAAAGAGAAGGGAACTTGGAGCCGCCATTTTGGACATGCCTTTAGGCTCGTTTTCCTaGTTCATTTTAAGATTTGGA +
Preference number: 2 (lower is better)
Translates to: YTWLAKRRELGAAILDMPLGSFS*FILRFG
Trigger: TCCAAATCTTAAAATGAAGCAGGAAAACGAGCCTAA...AGGCATGTCCAAAATGGCGGCTCCAAGTTCCCTTCTCTTTGCCAGCCATGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR-3UTR TCA 90 bp TCTTATTATGCAAATGAGCTTTGGCTGACACTATGTTGCCTGCTTTTTACTGTATATTGTGCTTCAGAGTaGCCAAGATATGGGCCACAG +
Preference number: 2 (lower is better)
Translates to: SYYANELWLTLCCLLFTVYCASE*PRYGPQ
Trigger: CTGTGGCCCATATCTTGGTCACTCTGAAGCACAATA...TACAGTAAAAAGCAGGCAACATAGTGTCAGCCAAAGCTCATTTGCATAATAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR-3UTR TCA 90 bp AGAATTTCTGTTCAAGGAAAGCAGATAACAGACAGGGTTAAGGGCATTTGCTTGCTAGCAGTAGAAACCTaGTTTCTAGGAATTTCGGCT +
Preference number: 2 (lower is better)
Translates to: RISVQGKQITDRVKGICLLAVET*FLGISA
Trigger: AGCCGAAATTCCTAGAAATCAGGTTTCTACTGCTAG...CAAGCAAATGCCCTTAACCCTGTCTGTTATCTGCTTTCCTTGAACAGAAATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR CAA 90 bp ATAACAGACAGGGTTAAGGGCATTTGCTTGGAATATTTAGGAGTTTaGCAGGTCATTCCTTTGAAATGGAATTTGTTGCACATCCCCGAT +
Preference number: 2 (lower is better)
Translates to: ITDRVKGICLEYLGV*QVIPLKWNLLHIPD
Trigger: ATCGGGGATGTGCAACAAATTCCATTTCAAAGGAATGACCTGCAAAACTCCTAAATATTCCAAGCAAATGCCCTTAACCCTGTCTGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR-3UTR CCA 90 bp AGAATTTCTGTTCAAGGAAAGCAGATAACAGACAGGGTTAAGGGCATTTGCTTGAAGAAATCCAGATCGTaGTGTGAACATTCTAGTCCT +
Preference number: 2 (lower is better)
Translates to: RISVQGKQITDRVKGICLKKSRS*CEHSSP
Trigger: AGGACTAGAATGTTCACACCACGATCTGGATTTCTT...CAAGCAAATGCCCTTAACCCTGTCTGTTATCTGCTTTCCTTGAACAGAAATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR CAA 90 bp AAGGGCATTTGCTTGGAATATTTAGGAGTTTTGCAGGTCATTCCTTaGAAATGGAATTTGTTGCACATCCCCGATCTGAGATTAGAAACT +
Preference number: 2 (lower is better)
Translates to: KGICLEYLGVLQVIP*KWNLLHIPDLRLET
Trigger: AGTTTCTAATCTCAGATCGGGGATGTGCAACAAATTCCATTTCAAAGGAATGACCTGCAAAACTCCTAAATATTCCAAGCAAATGCCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR TCA 72 bp GAACCAGCCTTAGGCATGGAGGTTGAGGATCAGGAGTaGCTTGAGGGTACTGACTGGCAGAGCAGGAGCCCC +
Preference number: 3 (lower is better)
Translates to: EPALGMEVEDQE*LEGTDWQSRSP
Trigger: GGGGCTCCTGCTCTGCCAGTCAGTACCCTCAAGTCACTCCTGATCCTCAACCTCCATGCCTAAGGCTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR GCA 72 bp GCCCAGAGGATGGAGATGGTAGGTAGTGTAGGGCAGTaGAAGAAGCTCCAGCTCTGGGACCAGTTGGATGGG +
Preference number: 3 (lower is better)
Translates to: AQRMEMVGSVGQ*KKLQLWDQLDG
Trigger: CCCATCCAACTGGTCCCAGAGCTGGAGCTTCTTGCACTGCCCTACACTACCTACCATCTCCATCCTCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR TCA 72 bp AAGAAGCTCCAGCTCTGGGACCAGTTGGATGGGGTTTaGATCCTAACCCTGGCTCCTGTTAGTGGGATGGCC +
Preference number: 3 (lower is better)
Translates to: KKLQLWDQLDGV*ILTLAPVSGMA
Trigger: GGCCATCCCACTAACAGGAGCCAGGGTTAGGATTCAAACCCCATCCAACTGGTCCCAGAGCTGGAGCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR GCA 72 bp GGGACCCACATGTTCCAAGCCTCCAGCTGTGTGTTCTaGTTCCTCAAGCAGCAGCTGACTCTGATATTCCCC +
Preference number: 3 (lower is better)
Translates to: GTHMFQASSCVF*FLKQQLTLIFP
Trigger: GGGGAATATCAGAGTCAGCTGCTGCTTGAGGAAGCAGAACACACAGCTGGAGGCTTGGAACATGTGGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR TCA 72 bp GACCAAGATATGGGCCACAGCTGGCCGTCCATATGCTaGGAGTTTGATGAGCACATTGCAGGGCATGGAAGA +
Preference number: 3 (lower is better)
Translates to: DQDMGHSWPSIC*EFDEHIAGHGR
Trigger: TCTTCCATGCCCTGCAATGTGCTCATCAAACTCTCAGCATATGGACGGCCAGCTGTGGCCCATATCTTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR-3UTR CAA 90 bp GGCGCAGACAGGTCCAAGGAAGCCCCATATAAATCCCTTTTCTGGTTGGAGCCACACCTTGTGTCCGGTTaGATCAATTGCCACGAGGAA +
Preference number: 3 (lower is better)
Translates to: GADRSKEAPYKSLFWLEPHLVSG*INCHEE
Trigger: TTCCTCGTGGCAATTGATCAAACCGGACACAAGGTG...TGGCTCCAACCAGAAAAGGGATTTATATGGGGCTTCCTTGGACCTGTCTGCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595208.5
3UTR CCA 72 bp GACACTATGTTGCCTGCTTTTTACTGTACACATGGCTaGCAAAGAGAAGGGAACTTGGAGCCGCCATTTTGG +
Preference number: 3 (lower is better)
Translates to: DTMLPAFYCTHG*QREGNLEPPFW
Trigger: CCAAAATGGCGGCTCCAAGTTCCCTTCTCTTTGCCAGCCATGTGTACAGTAAAAAGCAGGCAACATAGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR CCA 72 bp AACTTCACCCTCATACAATGGGCCCCAGTAAAACAGTaGGCCTTAATAAGCACATTCCTTTCCCTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: NFTLIQWAPVKQ*ALISTFLSLQV
Trigger: CACCTGGAGGGAAAGGAATGTGCTTATTAAGGCCCACTGTTTTACTGGGGCCCATTGTATGAGGGTGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR CCA 72 bp AGGGTACTGACTGGCAGAGCAGGAGCCCCGTTATTTTaGACAAACACCGCCACTTTAAGTTTCAGCTTCATT +
Preference number: 3 (lower is better)
Translates to: RVLTGRAGAPLF*TNTATLSFSFI
Trigger: AATGAAGCTGAAACTTAAAGTGGCGGTGTTTGTCCAAAATAACGGGGCTCCTGCTCTGCCAGTCAGTACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR GCA 72 bp TCTTACACTGACCTAGTGGTGGAGGCTTGGCAAGGATaGCTGTTACCAAGTGGGTTACTTCTGCACTATTTA +
Preference number: 3 (lower is better)
Translates to: SYTDLVVEAWQG*LLPSGLLLHYL
Trigger: TAAATAGTGCAGAAGTAACCCACTTGGTAACAGGCATCCTTGCCAAGCCTCCACCACTAGGTCAGTGTAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR-3UTR CAA 90 bp ACTATGTTGCCTGCTTTTTACTGTACACATGGCTGGCAAAGAGAAGGGAACTTGTTGAAATGGAATTTGTaGCACATCCCCGATCTGAGA +
Preference number: 3 (lower is better)
Translates to: TMLPAFYCTHGWQREGNLLKWNL*HIPDLR
Trigger: TCTCAGATCGGGGATGTGCAACAAATTCCATTTCAA...CAAGTTCCCTTCTCTTTGCCAGCCATGTGTACAGTAAAAAGCAGGCAACATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR-3UTR CAA 90 bp TCTATATCAAGCAAAGGGCACGCAGAATCCCATGCACCCATCATGTATGTAATAATGTTCCCAGCTGAGTaGACAAAGCAATGCTCTGTA +
Preference number: 3 (lower is better)
Translates to: SISSKGHAESHAPIMYVIMFPAE*TKQCSV
Trigger: TACAGAGCATTGCTTTGTCAACTCAGCTGGGAACAT...TATTACATACATGATGGGTGCATGGGATTCTGCGTGCCCTTTGCTTGATATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR TCA 72 bp AGCAGTAGAAACCTGATTTCTAGGAATTTCGGCTTCTaGGTCAACTCTAGCTGCAAGAGCCACTTCATTTTC +
Preference number: 3 (lower is better)
Translates to: SSRNLISRNFGF*VNSSCKSHFIF
Trigger: GAAAATGAAGTGGCTCTTGCAGCTAGAGTTGACTCAGAAGCCGAAATTCCTAGAAATCAGGTTTCTACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR TCA 72 bp CCCCACCCTAATCTTATTATGCAAATGAGCTTTGGCTaGCACTATGTTGCCTGCTTTTTACTGTACACATGG +
Preference number: 3 (lower is better)
Translates to: PHPNLIMQMSFG*HYVACFLLYTW
Trigger: CCATGTGTACAGTAAAAAGCAGGCAACATAGTGTCAGCCAAAGCTCATTTGCATAATAAGATTAGGGTGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR TCA 72 bp ATCATGGTCTGGAAACTATGGGCAGTGAGTCAAATCTaGCCCACCATCTGTTTCTGTACAGCTAAGAATAGT +
Preference number: 3 (lower is better)
Translates to: IMVWKLWAVSQI*PTICFCTAKNS
Trigger: ACTATTCTTAGCTGTACAGAAACAGATGGTGGGTCAGATTTGACTCACTGCCCATAGTTTCCAGACCATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR GCA 72 bp GTTGTCGGTATGAAAGTCCTCTTAGGCTCGTTTTCCTaGTTCATTTTAAGATTTGGAGGAGTCTTTGTAGGA +
Preference number: 3 (lower is better)
Translates to: VVGMKVLLGSFS*FILRFGGVFVG
Trigger: TCCTACAAAGACTCCTCCAAATCTTAAAATGAAGCAGGAAAACGAGCCTAAGAGGACTTTCATACCGACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR GCA 72 bp CAAGGAAAGCAGATAACAGACAGGGTTAAGGGCATTTaGTTGGAATATTTAGGAGTTTTGCAGGTCATTCCT +
Preference number: 3 (lower is better)
Translates to: QGKQITDRVKGI*LEYLGVLQVIP
Trigger: AGGAATGACCTGCAAAACTCCTAAATATTCCAAGCAAATGCCCTTAACCCTGTCTGTTATCTGCTTTCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR GCA 72 bp TCTTATTATGCAAATGAGCTTTGGCTGACACTATGTTaGCTGCTTTTTACTGTACACATGGCTGGCAAAGAG +
Preference number: 3 (lower is better)
Translates to: SYYANELWLTLC*LLFTVHMAGKE
Trigger: CTCTTTGCCAGCCATGTGTACAGTAAAAAGCAGGCAACATAGTGTCAGCCAAAGCTCATTTGCATAATAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR GCA 72 bp GCAGTCTATATCAAGCAAAGGGCACGCAGAATCCCATaGACCCATCATGTATGTAATAAAAGGCAGATATTA +
Preference number: 3 (lower is better)
Translates to: AVYIKQRARRIP*THHVCNKRQIL
Trigger: TAATATCTGCCTTTTATTACATACATGATGGGTGCATGGGATTCTGCGTGCCCTTTGCTTGATATAGACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR TCA 72 bp ATGACTTGCTTTATTGCAATATTCACATTATTGTGGTaGTCTGGAGTGGAGCCTGCAATATCTCTGAGGTGT +
Preference number: 3 (lower is better)
Translates to: MTCFIAIFTLLW*SGVEPAISLRC
Trigger: ACACCTCAGAGATATTGCAGGCTCCACTCCAGATCACCACAATAATGTGAATATTGCAATAAAGCAAGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR TCA 72 bp AATAGTTTATACTTCAATTGCCTAGCAGTAGAAACCTaGTTTCTAGGAATTTCGGCTTCTGAGTCAACTCTA +
Preference number: 3 (lower is better)
Translates to: NSLYFNCLAVET*FLGISASESTL
Trigger: TAGAGTTGACTCAGAAGCCGAAATTCCTAGAAATCAGGTTTCTACTGCTAGGCAATTGAAGTATAAACTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp GCCTGCGGATTGCCTGAGCTCAGGAGATTAAGACCTGAGCCTGGGCAGCATAGTAGACGCGGCCTCCCATaGTTCCAGCTGAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: ACGLPELRRLRPEPGQHSRRGLP*FQLSCR
Trigger: CCGGCAGCTCAGCTGGAACCATGGGAGGCCGCGTCT...ACTATGCTGCCCAGGCTCAGGTCTTAATCTCCTGAGCTCAGGCAATCCGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp GCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCCAGGAAGACGCGGCCTCCCATaGTTCCAGCTGAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: APCVRFDQLPRGRGGGPGRRGLP*FQLSCR
Trigger: CCGGCAGCTCAGCTGGAACCATGGGAGGCCGCGTCT...TCCTGGCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392962.3
CDS-3UTR TCA 90 bp GGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGTCCCATGGTTCCAGCTaGGCTGCCGGCAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GAQHLVSGLINCHEEEEVSHGSS*AAGRSS
Trigger: GCTGCTCCTGCCGGCAGCTCAGCTGGAACCATGGGA...CACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392962.3
CDS-3UTR GCA 90 bp TGCCGGCATTCACCCGTGGAAGCTTCCAGCTTGCTTGTCTATGTCTGCAGCTCGCTGGCCACACAGTGCTaGTGTAAGCGGGGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: CRHSPVEASSLLVYVCSSLATQC*CKRGRV
Trigger: GACCCTGCCCCGCTTACAGCAGCACTGTGTGGCCAG...CGAGCTGCAGACATAGACAAGCAAGCTGGAAGCTTCCACGGGTGAATGCCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp GCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCCAGGACTGGCCACACAGTGCTaGTGTAAGCGGGGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: APCVRFDQLPRGRGGGPGLATQC*CKRGRV
Trigger: GACCCTGCCCCGCTTACAGCAGCACTGTGTGGCCAG...TCCTGGCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR CCA 90 bp GCCTGCGGATTGCCTGAGCTCAGGAGATTAAGACCTGAGCCTGGGCAGCATAGTGGCCACTGTCACAGCTaGGACTCCGTAGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: ACGLPELRRLRPEPGQHSGHCHS*DSVAHR
Trigger: CCTGTGGGCTACGGAGTCCCAGCTGTGACAGTGGCC...ACTATGCTGCCCAGGCTCAGGTCTTAATCTCCTGAGCTCAGGCAATCCGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp CACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCCAGGAACTGGCCACACAGTGCTaGTGTAAGCGGGGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: HLVSGLINCHEEEEVGQELATQC*CKRGRV
Trigger: GACCCTGCCCCGCTTACAGCAGCACTGTGTGGCCAG...TTCCTGGCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR GCA 90 bp GCCTGCGGATTGCCTGAGCTCAGGAGATTAAGACCTGAGCCTGGGCAGCATAGTCTTGAGCCATCCTCCTaGCTCACCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: ACGLPELRRLRPEPGQHSLEPSS*LTLPKC
Trigger: GCACTTTGGGAGGGTGAGGCAGGAGGATGGCTCAAG...ACTATGCTGCCCAGGCTCAGGTCTTAATCTCCTGAGCTCAGGCAATCCGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp TGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTACCGGGCACAGCCCCTaGAGTCCTGGGTTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: WSTAPCVRFDQLPRGRGGTGHSP*SPGFQL
Trigger: GAGCTGAAACCCAGGACTCCAGGGGCTGTGCCCGGT...ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392962.3
CDS-3UTR CCA 90 bp CACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCCAGGAAAATCGGGAAAGCGTCTaGCTGTGGACTCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: HLVSGLINCHEEEEVGQENRESV*LWTPGG
Trigger: GCCCCCTGGAGTCCACAGCCAGACGCTTTCCCGATT...TTCCTGGCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR CCA 90 bp GCCGGCATTCACCCGTGGAAGCTTCCAGCTTGCTTGTCTATGTCTGCAGCTCGATGCCCATCCCTGGAATaGAGACAAGGCCCACCACAG +
Preference number: 4 (lower is better)
Translates to: AGIHPWKLPACLSMSAARCPSLE*RQGPPQ
Trigger: CTGTGGTGGGCCTTGTCTCCATTCCAGGGATGGGCA...TCGAGCTGCAGACATAGACAAGCAAGCTGGAAGCTTCCACGGGTGAATGCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp CCTTTTCTGGTTGGAGCCAGCAGCGGGAAGGTGTTCCATAAAGGTGAGGCCTGGTTGTGCTGCAGCCTGTaGTGGCCCAGTGACCACATC +
Preference number: 4 (lower is better)
Translates to: PFLVGASSGKVFHKGEAWLCCSL*WPSDHI
Trigger: GATGTGGTCACTGGGCCACCACAGGCTGCAGCACAA...CCAGGCCTCACCTTTATGGAACACCTTCCCGCTGCTGGCTCCAACCAGAAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS-3UTR CCA 90 bp TGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGCCACTGTCACAGCTaGGACTCCGTAGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: WSTAPCVRFDQLPRGRGGGHCHS*DSVAHR
Trigger: CCTGTGGGCTACGGAGTCCCAGCTGTGACAGTGGCC...ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS-3UTR GCA 90 bp TCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGCCCCGGAACTGGCGGTaGAGCTGGGCTTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SPLDGSKIVQIFHGQRGKPRNWR*SWAWWQ
Trigger: CTGCCACCAAGCCCAGCTGCACCGCCAGTTCCGGGG...CTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp GGCGCAGACAGGTCCAAGGAAGCCCCATATAAATCCCTTTTCTGGTTGGAGCCACTCTGGTGCCTATTGTaGTGCAGCCTGTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GADRSKEAPYKSLFWLEPLWCLL*CSLWWP
Trigger: GGGCCACCACAGGCTGCAGCACAATAGGCACCAGAG...TGGCTCCAACCAGAAAAGGGATTTATATGGGGCTTCCTTGGACCTGTCTGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS-3UTR GCA 90 bp GCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCACTCGTCCACATCTGTaGAGAGCTTCGGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: AQHLVSGLINCHEEEEVGTRPHL*RASGPQ
Trigger: CTGAGGACCCGAAGCTCTGCACAGATGTGGACGAGT...GCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR GCA 90 bp GCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCCAGGAACTCGTCCACATCTGTaGAGAGCTTCGGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: APCVRFDQLPRGRGGGPGTRPHL*RASGPQ
Trigger: CTGAGGACCCGAAGCTCTGCACAGATGTGGACGAGT...TCCTGGCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR CCA 90 bp GCCGGCATTCACCCGTGGAAGCTTCCAGCTTGCTTGTCTATGTCTGCAGCTCGACATCCAGCAGGTGACTaGCCACACAGTGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: AGIHPWKLPACLSMSAARHPAGD*PHSAAV
Trigger: TACAGCAGCACTGTGTGGCCAGTCACCTGCTGGATG...TCGAGCTGCAGACATAGACAAGCAAGCTGGAAGCTTCCACGGGTGAATGCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp CCTTTTCTGGTTGGAGCCAGCAGCGGGAAGGTGTTCCATAAAGGTGAGGCCTGGCATCCAGCAGGTGACTaGCCACACAGTGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: PFLVGASSGKVFHKGEAWHPAGD*PHSAAV
Trigger: TACAGCAGCACTGTGTGGCCAGTCACCTGCTGGATG...CCAGGCCTCACCTTTATGGAACACCTTCCCGCTGCTGGCTCCAACCAGAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS-3UTR CCA 90 bp GCCTGCGGATTGCCTGAGCTCAGGAGATTAAGACCTGAGCCTGGGCAGCATAGTCAACTTGCCCATCCCTaGAATGGAGACAAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: ACGLPELRRLRPEPGQHSQLAHP*NGDKAH
Trigger: GTGGGCCTTGTCTCCATTCCAGGGATGGGCAAGTTG...ACTATGCTGCCCAGGCTCAGGTCTTAATCTCCTGAGCTCAGGCAATCCGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp GATGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGGGTGCAACGGCAGATaGTGCTGGTGTCTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: DGAQHLVSGLINCHEEEEGCNGR*CWCLWC
Trigger: GCACCAGAGACACCAGCACCATCTGCCGTTGCACCC...CTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS-3UTR TCA 90 bp CACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCCAGGAATCTTGCTCAGGCCTCTaGGGACATCCTCTAGGCCAT +
Preference number: 4 (lower is better)
Translates to: HLVSGLINCHEEEEVGQESCSGL*GHPLGH
Trigger: ATGGCCTAGAGGATGTCCTCAGAGGCCTGAGCAAGA...TTCCTGGCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR TCA 90 bp GCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCCAGGACCAGATTTCTGTGCCTaGTTCCAGTCGAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: APCVRFDQLPRGRGGGPGPDFCA*FQSSCI
Trigger: GATGCAGCTCGACTGGAATCAGGCACAGAAATCTGG...TCCTGGCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR GCA 90 bp GATGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGAGGCAGAGCGAGAGCTaGAGATGCAGTGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: DGAQHLVSGLINCHEEEERQSES*RCSEVL
Trigger: CAGCACCTCACTGCATCTGCAGCTCTCGCTCTGCCT...CTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR CCA 90 bp CACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCCAGGAACATCCAGCAGGTGACTaGCCACACAGTGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: HLVSGLINCHEEEEVGQEHPAGD*PHSAAV
Trigger: TACAGCAGCACTGTGTGGCCAGTCACCTGCTGGATG...TTCCTGGCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR CCA 90 bp CCTTTTCTGGTTGGAGCCAGCAGCGGGAAGGTGTTCCATAAAGGTGAGGCCTGGCTCGGGATCACTGACTaGGTCACCAGATTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: PFLVGASSGKVFHKGEAWLGITD*VTRFLC
Trigger: GCACAGAAATCTGGTGACCCAGTCAGTGATCCCGAG...CCAGGCCTCACCTTTATGGAACACCTTCCCGCTGCTGGCTCCAACCAGAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS-3UTR TCA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTCCCATGGTTCCAGCTaGGCTGCCGGCAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKISHGSS*AAGRSS
Trigger: GCTGCTCCTGCCGGCAGCTCAGCTGGAACCATGGGA...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000392965.7
CDS-3UTR TCA 90 bp GATGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGTCTTGCTCAGGCCTCTaGGGACATCCTCTAGGCCAT +
Preference number: 4 (lower is better)
Translates to: DGAQHLVSGLINCHEEEESCSGL*GHPLGH
Trigger: ATGGCCTAGAGGATGTCCTCAGAGGCCTGAGCAAGA...CTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR TCA 90 bp GCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCAGCTGCATCACTGCCTaGTTCTGTCTCAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: AQHLVSGLINCHEEEEVGSCITA*FCLKVT
Trigger: TGTCACCTTGAGACAGAATCAGGCAGTGATGCAGCT...GCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR TCA 90 bp GCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCCAGGAACCTTGTGTCCGGTTTaGTCAATTGCCACGAGGAAG +
Preference number: 4 (lower is better)
Translates to: APCVRFDQLPRGRGGGPGTLCPV*SIATRK
Trigger: CTTCCTCGTGGCAATTGATCAAACCGGACACAAGGT...TCCTGGCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR GCA 90 bp CACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCCAGGAAACACTCCTGTCTACTTaGTTCTGCACCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: HLVSGLINCHEEEEVGQETLLST*FCTSRD
Trigger: GTCCCTGGAGGTGCAGAAGCAAGTAGACAGGAGTGT...TTCCTGGCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR GCA 90 bp GCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCCAGGAGTCGAGCTGCATCACTaGCTGATTCTGTCTCAAGGT +
Preference number: 4 (lower is better)
Translates to: APCVRFDQLPRGRGGGPGVELHH*LILSQG
Trigger: ACCTTGAGACAGAATCAGGCAGTGATGCAGCTCGAC...TCCTGGCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR GCA 90 bp GCCTGCGGATTGCCTGAGCTCAGGAGATTAAGACCTGAGCCTGGGCAGCATAGTGTCACCAGATTTCTGTaGCTGATTCCAGTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: ACGLPELRRLRPEPGQHSVTRFL*LIPVEL
Trigger: CAGCTCGACTGGAATCAGGCACAGAAATCTGGTGAC...ACTATGCTGCCCAGGCTCAGGTCTTAATCTCCTGAGCTCAGGCAATCCGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp GTGTGGTGGTACACACCTGTAGTTTCAAATACCTGGAGGGGGACTGAGGCAGGACCTCAGCCAGCAACTTaGCCATCCCTGGAATGGAGA +
Preference number: 4 (lower is better)
Translates to: VWWYTPVVSNTWRGTEAGPQPAT*PSLEWR
Trigger: TCTCCATTCCAGGGATGGGCAAGTTGCTGGCTGAGG...TCCTGCCTCAGTCCCCCTCCAGGTATTTGAAACTACAGGTGTGTACCACCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp GCCGGCATTCACCCGTGGAAGCTTCCAGCTTGCTTGTCTATGTCTGCAGCTCGATCATGCAGAAGCATCTaGTTCTCAGGTTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: AGIHPWKLPACLSMSAARSCRSI*FSGSRT
Trigger: GGTCCTGGAACCTGAGAAGCAGATGCTTCTGCATGA...TCGAGCTGCAGACATAGACAAGCAAGCTGGAAGCTTCCACGGGTGAATGCCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp TCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATGGGGGAGCCGTCCTaGAGCAAGCCCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: SPLDGSKIVQIFHGQRGKMGEPS*SKPWCV
Trigger: GACACACCAGGGCTTGCTGCAGGACGGCTCCCCCAT...CTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp GGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGTTATTGGCCAAGCCTaGCTTGTAGTCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GAQHLVSGLINCHEEEEVVIGQA*LVVSAQ
Trigger: CTGGGCAGAGACTACAAGCCAGGCTTGGCCAATAAC...CACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR CCA 90 bp GCCTGCGGATTGCCTGAGCTCAGGAGATTAAGACCTGAGCCTGGGCAGCATAGTGAAGGTGAAGGTAACTaGGGAGCTGAGGTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: ACGLPELRRLRPEPGQHSEGEGN*GAEVLG
Trigger: ACCCAAAACCTCAGCTCCCCAGTTACCTTCACCTTC...ACTATGCTGCCCAGGCTCAGGTCTTAATCTCCTGAGCTCAGGCAATCCGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp TGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTTGGTGCTGGTGTCTCTaGTGCCTATTGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WSTAPCVRFDQLPRGRGGWCWCL*CLLCCS
Trigger: GCTGCAGCACAATAGGCACCAGAGACACCAGCACCA...ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS-3UTR CCA 90 bp GGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGAACGGCAGATGGTGCTaGTGTCTCTGGTGCCTATTG +
Preference number: 4 (lower is better)
Translates to: GAQHLVSGLINCHEEEEVNGRWC*CLWCLL
Trigger: CAATAGGCACCAGAGACACCAGCACCATCTGCCGTT...CACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS-3UTR CCA 90 bp TGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTACGGGATCCTCCTCCTaGGTCACCAGATTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: WSTAPCVRFDQLPRGRGGTGSSS*VTRFLC
Trigger: GCACAGAAATCTGGTGACCCAGGAGGAGGATCCCGT...ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392962.3
CDS-3UTR TCA 90 bp CACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCCAGGAATGCCTGCAGGATAACTaGAGTTCAACAGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: HLVSGLINCHEEEEVGQECLQDN*SSTAHW
Trigger: CCAATGGGCTGTTGAACTTCAGTTATCCTGCAGGCA...TTCCTGGCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR TCA 90 bp GCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCCAGGAGATTCTGTCTCAAGGTaGCACTCCTGTCTACTTGCT +
Preference number: 4 (lower is better)
Translates to: APCVRFDQLPRGRGGGPGDSVSR*HSCLLA
Trigger: AGCAAGTAGACAGGAGTGTCACCTTGAGACAGAATC...TCCTGGCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR TCA 90 bp TGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTCCAGATTTCTGTGCCTaGTTCCAGTCGAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: WSTAPCVRFDQLPRGRGGPDFCA*FQSSCI
Trigger: GATGCAGCTCGACTGGAATCAGGCACAGAAATCTGG...ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR TCA 90 bp TGCCGGCATTCACCCGTGGAAGCTTCCAGCTTGCTTGTCTATGTCTGCAGCTCGTGGCCGTCCATATGCTaGGAGTTTGATGAGCACATT +
Preference number: 4 (lower is better)
Translates to: CRHSPVEASSLLVYVCSSWPSIC*EFDEHI
Trigger: AATGTGCTCATCAAACTCTCAGCATATGGACGGCCA...CGAGCTGCAGACATAGACAAGCAAGCTGGAAGCTTCCACGGGTGAATGCCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp TGCCGGCATTCACCCGTGGAAGCTTCCAGCTTGCTTGTCTATGTCTGCAGCTCGTATTGTGCTTCAGAGTaGCCAAGATATGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: CRHSPVEASSLLVYVCSSYCASE*PRYGPQ
Trigger: CTGTGGCCCATATCTTGGTCACTCTGAAGCACAATA...CGAGCTGCAGACATAGACAAGCAAGCTGGAAGCTTCCACGGGTGAATGCCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCCTGGCCACACAGTGCTaGTGTAAGCGGGGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKILATQC*CKRGRV
Trigger: GACCCTGCCCCGCTTACAGCAGCACTGTGTGGCCAG...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp GATGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGACACTCCTGTCTACTTaGTTCTGCACCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: DGAQHLVSGLINCHEEEETLLST*FCTSRD
Trigger: GTCCCTGGAGGTGCAGAAGCAAGTAGACAGGAGTGT...CTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR GCA 90 bp GGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGTCGAGCTGCATCACTaGCTGATTCTGTCTCAAGGT +
Preference number: 4 (lower is better)
Translates to: GAQHLVSGLINCHEEEEVVELHH*LILSQG
Trigger: ACCTTGAGACAGAATCAGGCAGTGATGCAGCTCGAC...CACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR GCA 90 bp GGCGCAGACAGGTCCAAGGAAGCCCCATATAAATCCCTTTTCTGGTTGGAGCCACATCCATTCTGGCCATaGTCCCAGAAGACACAGAGC +
Preference number: 4 (lower is better)
Translates to: GADRSKEAPYKSLFWLEPHPFWP*SQKTQS
Trigger: GCTCTGTGTCTTCTGGGAGCATGGCCAGAATGGATG...TGGCTCCAACCAGAAAAGGGATTTATATGGGGCTTCCTTGGACCTGTCTGCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS-3UTR GCA 90 bp ATGGCGCAGACAGGTCCAAGGAAGCCCCATATAAATCCCTTTTCTGGTTGGAGCTGCTGGTGTCTCTGGTaGCTATTGTGCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: MAQTGPRKPHINPFSGWSCWCLW*LLCCSL
Trigger: CAGGCTGCAGCACAATAGGCACCAGAGACACCAGCA...GCTCCAACCAGAAAAGGGATTTATATGGGGCTTCCTTGGACCTGTCTGCGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS-3UTR CCA 90 bp GTGTGGTGGTACACACCTGTAGTTTCAAATACCTGGAGGGGGACTGAGGCAGGAGTTATTGGCCAAGCCTaGCTTGTAGTCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VWWYTPVVSNTWRGTEAGVIGQA*LVVSAQ
Trigger: CTGGGCAGAGACTACAAGCCAGGCTTGGCCAATAAC...TCCTGCCTCAGTCCCCCTCCAGGTATTTGAAACTACAGGTGTGTACCACCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp GCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCCAGGAGTAAGATGCTCTGGATaGTGTTATTGGCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: APCVRFDQLPRGRGGGPGVRCSG*CYWPSL
Trigger: CAGGCTTGGCCAATAACACCATCCAGAGCATCTTAC...TCCTGGCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR CCA 90 bp GCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCGCCTGTAAGATGCTCTaGATGGTGTTATTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: AQHLVSGLINCHEEEEVGACKML*MVLLAK
Trigger: CTTGGCCAATAACACCATCCAGAGCATCTTACAGGC...GCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR CCA 90 bp TTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGGCCACTGTCACAGCTaGGACTCCGTAGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: FPSRWLKDCSDFPRAKREGHCHS*DSVAHR
Trigger: CCTGTGGGCTACGGAGTCCCAGCTGTGACAGTGGCC...TTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp TGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTAATCCCTTTTCTGGTTaGAGCCAGCAGCGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: WSTAPCVRFDQLPRGRGGNPFSG*SQQREG
Trigger: ACCTTCCCGCTGCTGGCTCCAACCAGAAAAGGGATT...ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595208.5
3UTR CAA 72 bp ATATGGGCCACAGCTGGCCGTCCATATGCTGAGAGTTaGATGAGCACATTGCAGGGCATGGAAGATTTCCGG +
Preference number: 4 (lower is better)
Translates to: IWATAGRPYAES*MSTLQGMEDFR
Trigger: CCGGAAATCTTCCATGCCCTGCAATGTGCTCATCAAACTCTCAGCATATGGACGGCCAGCTGTGGCCCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR CAA 72 bp CAGCTCGGGCACAGAGGAAGGTGGAGGAAAAGTCTCTaGGGTAACTGCCAAACTTCACCCTCATACAATGGG +
Preference number: 4 (lower is better)
Translates to: QLGHRGRWRKSL*GNCQTSPSYNG
Trigger: CCCATTGTATGAGGGTGAAGTTTGGCAGTTACCCAAGAGACTTTTCCTCCACCTTCCTCTGTGCCCGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp GGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGATTCTGTCTCAAGGTaGCACTCCTGTCTACTTGCT +
Preference number: 4 (lower is better)
Translates to: GAQHLVSGLINCHEEEEVDSVSR*HSCLLA
Trigger: AGCAAGTAGACAGGAGTGTCACCTTGAGACAGAATC...CACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR TCA 90 bp TGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTAGCTGCATCACTGCCTaGTTCTGTCTCAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: WSTAPCVRFDQLPRGRGGSCITA*FCLKVT
Trigger: TGTCACCTTGAGACAGAATCAGGCAGTGATGCAGCT...ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR TCA 90 bp TGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTACCTTGTGTCCGGTTTaGTCAATTGCCACGAGGAAG +
Preference number: 4 (lower is better)
Translates to: WSTAPCVRFDQLPRGRGGTLCPV*SIATRK
Trigger: CTTCCTCGTGGCAATTGATCAAACCGGACACAAGGT...ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR TCA 90 bp GCCTGCGGATTGCCTGAGCTCAGGAGATTAAGACCTGAGCCTGGGCAGCATAGTAATGGAAAACCTTACTaGGGACTTCCTACCCTTGCT +
Preference number: 4 (lower is better)
Translates to: ACGLPELRRLRPEPGQHSNGKPY*GLPTLA
Trigger: AGCAAGGGTAGGAAGTCCTCAGTAAGGTTTTCCATT...ACTATGCTGCCCAGGCTCAGGTCTTAATCTCCTGAGCTCAGGCAATCCGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp ATGGCGCAGACAGGTCCAAGGAAGCCCCATATAAATCCCTTTTCTGGTTGGAGCCTGTCTCGGGATCACTaGCTGGGTCACCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: MAQTGPRKPHINPFSGWSLSRDH*LGHQIS
Trigger: AGAAATCTGGTGACCCAGTCAGTGATCCCGAGACAG...GCTCCAACCAGAAAAGGGATTTATATGGGGCTTCCTTGGACCTGTCTGCGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS-3UTR GCA 90 bp GGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGCAGCCAGACACAGAATaGGAGAAAGACGAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: GAQHLVSGLINCHEEEEVQPDTE*EKDEKD
Trigger: GTCTTTCTCGTCTTTCTCGCATTCTGTGTCTGGCTG...CACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392962.3
CDS-3UTR GCA 90 bp TGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTCCAGCGCCTGTAAGATaGTCTGGATGGTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: WSTAPCVRFDQLPRGRGGPAPVR*SGWCYW
Trigger: CCAATAACACCATCCAGAGCATCTTACAGGCGCTGG...ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR GCA 90 bp GGCGCAGACAGGTCCAAGGAAGCCCCATATAAATCCCTTTTCTGGTTGGAGCCACCAGCGCCTGTAAGATaGTCTGGATGGTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: GADRSKEAPYKSLFWLEPPAPVR*SGWCYW
Trigger: CCAATAACACCATCCAGAGCATCTTACAGGCGCTGG...TGGCTCCAACCAGAAAAGGGATTTATATGGGGCTTCCTTGGACCTGTCTGCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS-3UTR GCA 90 bp GGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGCTGTCTACTTGCTTCTaGACCTCCAGGGACAATTCT +
Preference number: 4 (lower is better)
Translates to: GAQHLVSGLINCHEEEEVLSTCF*TSRDNS
Trigger: AGAATTGTCCCTGGAGGTGCAGAAGCAAGTAGACAG...CACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR GCA 90 bp GATGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTCACCAGATTTCTGTaGCTGATTCCAGTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: DGAQHLVSGLINCHEEEEVTRFL*LIPVEL
Trigger: CAGCTCGACTGGAATCAGGCACAGAAATCTGGTGAC...CTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR GCA 90 bp TTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAACTCTGGTGCCTATTGTaGTGCAGCCTGTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: FPSRWLKDCSDFPRAKRELWCLL*CSLWWP
Trigger: GGGCCACCACAGGCTGCAGCACAATAGGCACCAGAG...TTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR GCA 90 bp TGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTTCCGGTTTGATCAATTaGCACGAGGAAGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: WSTAPCVRFDQLPRGRGGSGLIN*HEEEEV
Trigger: CACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGA...ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR GCA 90 bp CTTTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGTATTGCTCCCGGACCTaGTGGCTGAGGAGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: LSPLDGSKIVQIFHGQRGYCSRT*WLRRQY
Trigger: GTACTGCCTCCTCAGCCAGCAGGTCCGGGAGCAATA...CCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTGCAGCTGGGCTTGGTaGCAGACGTCTGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKICSWAW*QTSVVP
Trigger: TGGGACCACAGACGTCTGCCACCAAGCCCAGCTGCA...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp TTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAAATCGGGAAAGCGTCTaGCTGTGGACTCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: FPSRWLKDCSDFPRAKRENRESV*LWTPGG
Trigger: GCCCCCTGGAGTCCACAGCCAGACGCTTTCCCGATT...TTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCAATCGGGAAAGCGTCTaGCTGTGGACTCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKINRESV*LWTPGG
Trigger: GCCCCCTGGAGTCCACAGCCAGACGCTTTCCCGATT...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp GGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGTAAGATGCTCTGGATaGTGTTATTGGCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: GAQHLVSGLINCHEEEEVVRCSG*CYWPSL
Trigger: CAGGCTTGGCCAATAACACCATCCAGAGCATCTTAC...CACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR CCA 90 bp GGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGCCTGTAAGATGCTCTaGATGGTGTTATTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GAQHLVSGLINCHEEEEVACKML*MVLLAK
Trigger: CTTGGCCAATAACACCATCCAGAGCATCTTACAGGC...CACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR TCA 90 bp TACACATGGCTGGCAAAGAGAAGGGAACTTGGAGCCGCCATTTTGGACATGCCTTGCCTGCAGGATAACTaGAGTTCAACAGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: YTWLAKRRELGAAILDMPCLQDN*SSTAHW
Trigger: CCAATGGGCTGTTGAACTTCAGTTATCCTGCAGGCA...AGGCATGTCCAAAATGGCGGCTCCAAGTTCCCTTCTCTTTGCCAGCCATGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp TACACATGGCTGGCAAAGAGAAGGGAACTTGGAGCCGCCATTTTGGACATGCCTAGCTGCATCACTGCCTaGTTCTGTCTCAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: YTWLAKRRELGAAILDMPSCITA*FCLKVT
Trigger: TGTCACCTTGAGACAGAATCAGGCAGTGATGCAGCT...AGGCATGTCCAAAATGGCGGCTCCAAGTTCCCTTCTCTTTGCCAGCCATGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp GGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGACTGGCCACACAGTGCTaGTGTAAGCGGGGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GSKIVQIFHGQRGKILFRLATQC*CKRGRV
Trigger: GACCCTGCCCCGCTTACAGCAGCACTGTGTGGCCAG...TCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp TGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTCTGTCTACTTGCTTCTaGACCTCCAGGGACAATTCT +
Preference number: 4 (lower is better)
Translates to: WSTAPCVRFDQLPRGRGGLSTCF*TSRDNS
Trigger: AGAATTGTCCCTGGAGGTGCAGAAGCAAGTAGACAG...ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR GCA 90 bp CTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTAATGGGGGAGCCGTCCTaGAGCAAGCCCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: LDGSKIVQIFHGQRGKILMGEPS*SKPWCV
Trigger: GACACACCAGGGCTTGCTGCAGGACGGCTCCCCCAT...TAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp ATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGATCCCCATGGGGGAGCCGTCCTaGAGCAAGCCCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: MNYPMPLRHRIIWLQVIPMGEPS*SKPWCV
Trigger: GACACACCAGGGCTTGCTGCAGGACGGCTCCCCCAT...GGGGATCACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp AGAACTAAATTCACAGAGAAGATGGCGCAGACAGGTCCAAGGAAGCCCCATATATGGTGCCTATTGTGCTaGAGCCTGTGGTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: RTKFTEKMAQTGPRKPHIWCLLC*SLWWPS
Trigger: ACTGGGCCACCACAGGCTGCAGCACAATAGGCACCA...TATATGGGGCTTCCTTGGACCTGTCTGCGCCATCTTCTCTGTGAATTTAGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS-3UTR GCA 90 bp TTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAATGGTGCCTATTGTGCTaGAGCCTGTGGTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: FPSRWLKDCSDFPRAKREWCLLC*SLWWPS
Trigger: ACTGGGCCACCACAGGCTGCAGCACAATAGGCACCA...TTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR GCA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCAGACCCACCTGCAAGATaGCCAGACACCACGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSDPPAR*PDTTCS
Trigger: GCTGCACGTGGTGTCTGGGCATCTTGCAGGTGGGTC...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp CTTTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGTGGTGCTGGTGTCTCTaGTGCCTATTGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSPLDGSKIVQIFHGQRGWCWCL*CLLCCS
Trigger: GCTGCAGCACAATAGGCACCAGAGACACCAGCACCA...CCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CCA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCGGCCACTGTCACAGCTaGGACTCCGTAGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFGHCHS*DSVAHR
Trigger: CCTGTGGGCTACGGAGTCCCAGCTGTGACAGTGGCC...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp GATGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGTATAAATCCCTTTTCTaGTTGGAGCCAGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: DGAQHLVSGLINCHEEEEYKSLF*LEPAAG
Trigger: TCCCGCTGCTGGCTCCAACCAGAAAAGGGATTTATA...CTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595208.5
3UTR CAA 72 bp GCTGGCCGTCCATATGCTGAGAGTTTGATGAGCACATaGCAGGGCATGGAAGATTTCCGGTTTCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: AGRPYAESLMST*QGMEDFRFLQE
Trigger: TTCCTGCAGAAACCGGAAATCTTCCATGCCCTGCAATGTGCTCATCAAACTCTCAGCATATGGACGGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp TTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAATACTACTCAGGAGGCTaGGGCAGGAAGAATCACCCG +
Preference number: 4 (lower is better)
Translates to: FPSRWLKDCSDFPRAKREYYSGG*GRKNHP
Trigger: CGGGTGATTCTTCCTGCCTCAGCCTCCTGAGTAGTA...TTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTCTTGCTCAGGCCTCTaGGGACATCCTCTAGGCCAT +
Preference number: 4 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKISCSGL*GHPLGH
Trigger: ATGGCCTAGAGGATGTCCTCAGAGGCCTGAGCAAGA...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR TCA 90 bp TTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAACTCCTGACCTTAGGTaGTCTGACCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FPSRWLKDCSDFPRAKRETPDLR*SDHLSL
Trigger: GAGGCTGAGGTGGTCAGATCACCTAAGGTCAGGAGT...TTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp CTTTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGACACTCCTGTCTACTTaGTTCTGCACCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LSPLDGSKIVQIFHGQRGTLLST*FCTSRD
Trigger: GTCCCTGGAGGTGCAGAAGCAAGTAGACAGGAGTGT...CCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp CTTTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGCATCCATTCTGGCCATaGTCCCAGAAGACACAGAGC +
Preference number: 4 (lower is better)
Translates to: LSPLDGSKIVQIFHGQRGHPFWP*SQKTQS
Trigger: GCTCTGTGTCTTCTGGGAGCATGGCCAGAATGGATG...CCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR GCA 90 bp ATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGATCCCCCTCTGGTGCCTATTGTaGTGCAGCCTGTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: MNYPMPLRHRIIWLQVIPLWCLL*CSLWWP
Trigger: GGGCCACCACAGGCTGCAGCACAATAGGCACCAGAG...GGGGATCACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp AGAACTAAATTCACAGAGAAGATGGCGCAGACAGGTCCAAGGAAGCCCCATATATGCAACGGCAGATGGTaGTGGTGTCTCTGGTGCCTA +
Preference number: 4 (lower is better)
Translates to: RTKFTEKMAQTGPRKPHICNGRW*WCLWCL
Trigger: TAGGCACCAGAGACACCAGCACCATCTGCCGTTGCA...TATATGGGGCTTCCTTGGACCTGTCTGCGCCATCTTCTCTGTGAATTTAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS-3UTR GCA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCAAGGCAGAGCGAGAGCTaGAGATGCAGTGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSRQSES*RCSEVL
Trigger: CAGCACCTCACTGCATCTGCAGCTCTCGCTCTGCCT...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp GGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAGACCCACCTGCAAGATaGCCAGACACCACGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSKIVQIFHGQRGKILFRDPPAR*PDTTCS
Trigger: GCTGCACGTGGTGTCTGGGCATCTTGCAGGTGGGTC...TCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCGACCCACCTGCAAGATaGCCAGACACCACGTGCAGC +
Preference number: 4 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFDPPAR*PDTTCS
Trigger: GCTGCACGTGGTGTCTGGGCATCTTGCAGGTGGGTC...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp ATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGATCCCCCCTCAGCCAGCAACTTaGCCATCCCTGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: MNYPMPLRHRIIWLQVIPPQPAT*PSLGHQ
Trigger: CTGGTGACCCAGGGATGGGCAAGTTGCTGGCTGAGG...GGGGATCACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp GCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAACCGGGCACAGCCCCTaGAGTCCTGGGTTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: AQRLFRFSTGKEGRSYSETGHSP*SPGFQL
Trigger: GAGCTGAAACCCAGGACTCCAGGGGCTGTGCCCGGT...TTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp TTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAATCCTGCAGCAAGCCCTaGTGTGTCTCATGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: FPSRWLKDCSDFPRAKRESCSKP*CVSCRS
Trigger: GCTTCTGCATGAGACACACCAGGGCTTGCTGCAGGA...TTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTCCTGCAGCAAGCCCTaGTGTGTCTCATGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKISCSKP*CVSCRS
Trigger: GCTTCTGCATGAGACACACCAGGGCTTGCTGCAGGA...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCGGGTGCAACGGCAGATaGTGCTGGTGTCTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFGCNGR*CWCLWC
Trigger: GCACCAGAGACACCAGCACCATCTGCCGTTGCACCC...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
3UTR CAA 72 bp GAGGGTACTGACTGGCAGAGCAGGAGCCCCGTTATTTaGGACAAACACCGCCACTTTAAGTTTCAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: EGTDWQSRSPVI*DKHRHFKFQLH
Trigger: ATGAAGCTGAAACTTAAAGTGGCGGTGTTTGTCCAAAATAACGGGGCTCCTGCTCTGCCAGTCAGTACCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCATCTTGCTCAGGCCTCTaGGGACATCCTCTAGGCCAT +
Preference number: 4 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSSCSGL*GHPLGH
Trigger: ATGGCCTAGAGGATGTCCTCAGAGGCCTGAGCAAGA...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR TCA 90 bp TCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGTGCCTGCAGGATAACTaGAGTTCAACAGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: SPLDGSKIVQIFHGQRGKCLQDN*SSTAHW
Trigger: CCAATGGGCTGTTGAACTTCAGTTATCCTGCAGGCA...CTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR TCA 90 bp TCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGAGCTGCATCACTGCCTaGTTCTGTCTCAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: SPLDGSKIVQIFHGQRGKSCITA*FCLKVT
Trigger: TGTCACCTTGAGACAGAATCAGGCAGTGATGCAGCT...CTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR TCA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCCCAGATTTCTGTGCCTaGTTCCAGTCGAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKIPDFCA*FQSSCI
Trigger: GATGCAGCTCGACTGGAATCAGGCACAGAAATCTGG...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR TCA 90 bp CTTTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGACCTTGTGTCCGGTTTaGTCAATTGCCACGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LSPLDGSKIVQIFHGQRGTLCPV*SIATRK
Trigger: CTTCCTCGTGGCAATTGATCAAACCGGACACAAGGT...CCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR TCA 90 bp TCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGACCTTGTGTCCGGTTTaGTCAATTGCCACGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPLDGSKIVQIFHGQRGKTLCPV*SIATRK
Trigger: CTTCCTCGTGGCAATTGATCAAACCGGACACAAGGT...CTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR TCA 90 bp TACACATGGCTGGCAAAGAGAAGGGAACTTGGAGCCGCCATTTTGGACATGCCTTGGACACTTCACTATTaGGGGAGGAGAGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: YTWLAKRRELGAAILDMPWTLHY*GRRVCF
Trigger: AAAACAGACTCTCCTCCCTCAATAGTGAAGTGTCCA...AGGCATGTCCAAAATGGCGGCTCCAAGTTCCCTTCTCTTTGCCAGCCATGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp ATGGCGCAGACAGGTCCAAGGAAGCCCCATATAAATCCCTTTTCTGGTTGGAGCTGGACACTTCACTATTaGGGGAGGAGAGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: MAQTGPRKPHINPFSGWSWTLHY*GRRVCF
Trigger: AAAACAGACTCTCCTCCCTCAATAGTGAAGTGTCCA...GCTCCAACCAGAAAAGGGATTTATATGGGGCTTCCTTGGACCTGTCTGCGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS-3UTR TCA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCGGCCTGCGGATTGCCTaGGCTCAGGAGATTAAGACC +
Preference number: 4 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFGLRIA*AQEIKT
Trigger: GGTCTTAATCTCCTGAGCTCAGGCAATCCGCAGGCC...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp TACACATGGCTGGCAAAGAGAAGGGAACTTGGAGCCGCCATTTTGGACATGCCTTATTATGTGGTCTCTTaGACCAGCCTTAGGCATGGA +
Preference number: 4 (lower is better)
Translates to: YTWLAKRRELGAAILDMPYYVVS*TSLRHG
Trigger: TCCATGCCTAAGGCTGGTTCAAGAGACCACATAATA...AGGCATGTCCAAAATGGCGGCTCCAAGTTCCCTTCTCTTTGCCAGCCATGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp TCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGCCAGCGCCTGTAAGATaGTCTGGATGGTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: SPLDGSKIVQIFHGQRGKPAPVR*SGWCYW
Trigger: CCAATAACACCATCCAGAGCATCTTACAGGCGCTGG...CTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp CTTTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGGTCGAGCTGCATCACTaGCTGATTCTGTCTCAAGGT +
Preference number: 4 (lower is better)
Translates to: LSPLDGSKIVQIFHGQRGVELHH*LILSQG
Trigger: ACCTTGAGACAGAATCAGGCAGTGATGCAGCTCGAC...CCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp CTTTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGTCATGCAGAAGCATCTaGTTCTCAGGTTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: LSPLDGSKIVQIFHGQRGSCRSI*FSGSRT
Trigger: GGTCCTGGAACCTGAGAAGCAGATGCTTCTGCATGA...CCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp TCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGCCCTGGTGTGTCTCATaGAGAAGCATCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SPLDGSKIVQIFHGQRGKPWCVS*RSICFS
Trigger: TGAGAAGCAGATGCTTCTGCATGAGACACACCAGGG...CTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCTGGTGCCTATTGTGCTaGAGCCTGTGGTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFWCLLC*SLWWPS
Trigger: ACTGGGCCACCACAGGCTGCAGCACAATAGGCACCA...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR GCA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCATGCTGGTGTCTCTGGTaGCTATTGTGCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSCWCLW*LLCCSL
Trigger: CAGGCTGCAGCACAATAGGCACCAGAGACACCAGCA...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp CACGCCTTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACGACCCACCTGCAAGATaGCCAGACACCACGTGCAGC +
Preference number: 4 (lower is better)
Translates to: HAFHNILHIADMVNFLKHDPPAR*PDTTCS
Trigger: GCTGCACGTGGTGTCTGGGCATCTTGCAGGTGGGTC...GTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAAGGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR GCA 90 bp TCTATATCAAGCAAAGGGCACGCAGAATCCCATGCACCCATCATGTATGTAATACTGAGGCAGGAGGATTaGTTAGGCCTTGGGAGGTCG +
Preference number: 4 (lower is better)
Translates to: SISSKGHAESHAPIMYVILRQED*LGLGRS
Trigger: CGACCTCCCAAGGCCTAAGCAATCCTCCTGCCTCAG...TATTACATACATGATGGGTGCATGGGATTCTGCGTGCCCTTTGCTTGATATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTAGACGCGGCCTCCCATaGTTCCAGCTGAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFRRGLP*FQLSCR
Trigger: CCGGCAGCTCAGCTGGAACCATGGGAGGCCGCGTCT...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000392965.7
CDS-3UTR CCA 90 bp GCCTTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACAACCGGGCACAGCCCCTaGAGTCCTGGGTTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: AFHNILHIADMVNFLKHTTGHSP*SPGFQL
Trigger: GAGCTGAAACCCAGGACTCCAGGGGCTGTGCCCGGT...TGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CCA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCACATCCAGCAGGTGACTaGCCACACAGTGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSHPAGD*PHSAAV
Trigger: TACAGCAGCACTGTGTGGCCAGTCACCTGCTGGATG...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCATCCTGCAGCAAGCCCTaGTGTGTCTCATGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSSCSKP*CVSCRS
Trigger: GCTTCTGCATGAGACACACCAGGGCTTGCTGCAGGA...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp TTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGGGGAGCTGAGGTTTTaGGTGTCGTTGTTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: FPSRWLKDCSDFPRAKREGELRF*VSLLLR
Trigger: TCTGAGCAACAACGACACCCAAAACCTCAGCTCCCC...TTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp CTTTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGGAAGGTGAAGGTAACTaGGGAGCTGAGGTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: LSPLDGSKIVQIFHGQRGEGEGN*GAEVLG
Trigger: ACCCAAAACCTCAGCTCCCCAGTTACCTTCACCTTC...CCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp ATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGATCCCCTTGTGCTGCAGCCTGTaGTGGCCCAGTGACCACATC +
Preference number: 4 (lower is better)
Translates to: MNYPMPLRHRIIWLQVIPLCCSL*WPSDHI
Trigger: GATGTGGTCACTGGGCCACCACAGGCTGCAGCACAA...GGGGATCACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCATGGTGCTGGTGTCTCTaGTGCCTATTGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSWCWCL*CLLCCS
Trigger: GCTGCAGCACAATAGGCACCAGAGACACCAGCACCA...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCCAACTTGCCCATCCCTaGGTCACCAGATTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKIQLAHP*VTRFLC
Trigger: GCACAGAAATCTGGTGACCCAGGGATGGGCAAGTTG...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596991.6
CDS-3UTR CCA 90 bp ATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGATCCCCCTGTTCCTGGCGTGCTaGGTTTGGAGGTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: MNYPMPLRHRIIWLQVIPLFLAC*VWRCQP
Trigger: AGGCTGACACCTCCAAACCCAGCACGCCAGGAACAG...GGGGATCACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR TCA 90 bp TCTATATCAAGCAAAGGGCACGCAGAATCCCATGCACCCATCATGTATGTAATAAGTTTGAGGCTGCGGTaGGCTAAGATGGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SISSKGHAESHAPIMYVISLRLR*AKMVPL
Trigger: CAGTGGCACCATCTTAGCTCACCGCAGCCTCAAACT...TATTACATACATGATGGGTGCATGGGATTCTGCGTGCCCTTTGCTTGATATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp CTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATCTTGCTCAGGCCTCTaGGGACATCCTCTAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LDGSKIVQIFHGQRGKILSCSGL*GHPLGH
Trigger: ATGGCCTAGAGGATGTCCTCAGAGGCCTGAGCAAGA...TAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR TCA 90 bp CTTTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGGATTCTGTCTCAAGGTaGCACTCCTGTCTACTTGCT +
Preference number: 4 (lower is better)
Translates to: LSPLDGSKIVQIFHGQRGDSVSR*HSCLLA
Trigger: AGCAAGTAGACAGGAGTGTCACCTTGAGACAGAATC...CCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR TCA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCCTGTCTCGGGATCACTaGACGGTGGGAGAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFLSRDH*TVGEGE
Trigger: TTCACCTTCTCCCACCGTTCAGTGATCCCGAGACAG...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR GCA 90 bp CTTTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGCTGTCTACTTGCTTCTaGACCTCCAGGGACAATTCT +
Preference number: 4 (lower is better)
Translates to: LSPLDGSKIVQIFHGQRGLSTCF*TSRDNS
Trigger: AGAATTGTCCCTGGAGGTGCAGAAGCAAGTAGACAG...CCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCAACACTCCTGTCTACTTaGTTCTGCACCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSTLLST*FCTSRD
Trigger: GTCCCTGGAGGTGCAGAAGCAAGTAGACAGGAGTGT...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCGTCGAGCTGCATCACTaGCTGATTCTGTCTCAAGGT +
Preference number: 4 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKIVELHH*LILSQG
Trigger: ACCTTGAGACAGAATCAGGCAGTGATGCAGCTCGAC...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp AGAACTAAATTCACAGAGAAGATGGCGCAGACAGGTCCAAGGAAGCCCCATATAGTCACCAGATTTCTGTaGCTGATTCCAGTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: RTKFTEKMAQTGPRKPHIVTRFL*LIPVEL
Trigger: CAGCTCGACTGGAATCAGGCACAGAAATCTGGTGAC...TATATGGGGCTTCCTTGGACCTGTCTGCGCCATCTTCTCTGTGAATTTAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS-3UTR GCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTATGGGGGAGCCGTCCTaGAGCAAGCCCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFMGEPS*SKPWCV
Trigger: GACACACCAGGGCTTGCTGCAGGACGGCTCCCCCAT...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp GCCTTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACACTCTGGTGCCTATTGTaGTGCAGCCTGTGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: AFHNILHIADMVNFLKHTLWCLL*CSLWWP
Trigger: GGGCCACCACAGGCTGCAGCACAATAGGCACCAGAG...TGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR GCA 90 bp GGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGATGCTGGTGTCTCTGGTaGCTATTGTGCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GSKIVQIFHGQRGKILFRCWCLW*LLCCSL
Trigger: CAGGCTGCAGCACAATAGGCACCAGAGACACCAGCA...TCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR GCA 90 bp CTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATGCAACGGCAGATGGTaGTGGTGTCTCTGGTGCCTA +
Preference number: 4 (lower is better)
Translates to: LDGSKIVQIFHGQRGKILCNGRW*WCLWCL
Trigger: TAGGCACCAGAGACACCAGCACCATCTGCCGTTGCA...TAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR GCA 90 bp CTTTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAGCTGTCGCTTTAAATaGCAGCATCCTTGTGTTCCG +
Preference number: 4 (lower is better)
Translates to: LSPLDGSKIVQIFHGQRGSCRFK*QHPCVP
Trigger: CGGAACACAAGGATGCTGGCATTTAAAGCGACAGCT...CCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp CTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTAGACCATTTCCCATATTaGTCCCGGACCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LDGSKIVQIFHGQRGKILDHFPY*SRTCWL
Trigger: CAGCCAGCAGGTCCGGGAGCAATATGGGAAATGGTC...TAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp ACTATGTTGCCTGCTTTTTACTGTACACATGGCTGGCAAAGAGAAGGGAACTTGAACAGCTCTTTCTCTTaGATGGGAGAGGGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: TMLPAFYCTHGWQREGNLNSSFS*MGEGRL
Trigger: CAGACGCCCCTCTCCCATGCAAGAGAAAGAGCTGTT...CAAGTTCCCTTCTCTTTGCCAGCCATGTGTACAGTAAAAAGCAGGCAACATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp AATGTCATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGTTGCCCAGGCTGGAGTaGATTGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: NVMNYPMPLRHRIIWLQVLPRLE*IGAISA
Trigger: AGCCGAGATCGCGCCAATGCACTCCAGCCTGGGCAA...CACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCATGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp TTTCTTGAAACACACAGAACAAAGTCTTTTCTTTCCCCTCTAGATGGCTCAAAGAATCGGGAAAGCGTCTaGCTGTGGACTCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: FLETHRTKSFLSPLDGSKNRESV*LWTPGG
Trigger: GCCCCCTGGAGTCCACAGCCAGACGCTTTCCCGATT...CTTTGAGCCATCTAGAGGGGAAAGAAAAGACTTTGTTCTGTGTGTTTCAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp AATGTCATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGAATCGGGAAAGCGTCTaGCTGTGGACTCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: NVMNYPMPLRHRIIWLQVNRESV*LWTPGG
Trigger: GCCCCCTGGAGTCCACAGCCAGACGCTTTCCCGATT...CACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCATGACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp TCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGGTAAGATGCTCTGGATaGTGTTATTGGCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SPLDGSKIVQIFHGQRGKVRCSG*CYWPSL
Trigger: CAGGCTTGGCCAATAACACCATCCAGAGCATCTTAC...CTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp GGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGACATCCAGCAGGTGACTaGCCACACAGTGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: GSKIVQIFHGQRGKILFRHPAGD*PHSAAV
Trigger: TACAGCAGCACTGTGTGGCCAGTCACCTGCTGGATG...TCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCAGGGGAGCTGAGGTTTTaGGTGTCGTTGTTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSGELRF*VSLLLR
Trigger: TCTGAGCAACAACGACACCCAAAACCTCAGCTCCCC...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp GCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAATTGTGCTGCAGCCTGTaGTGGCCCAGTGACCACATC +
Preference number: 4 (lower is better)
Translates to: AQRLFRFSTGKEGRSYSELCCSL*WPSDHI
Trigger: GATGTGGTCACTGGGCCACCACAGGCTGCAGCACAA...TTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CCA 90 bp CTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATGGTGCTGGTGTCTCTaGTGCCTATTGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LDGSKIVQIFHGQRGKILWCWCL*CLLCCS
Trigger: GCTGCAGCACAATAGGCACCAGAGACACCAGCACCA...TAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CCA 90 bp TTTCTTGAAACACACAGAACAAAGTCTTTTCTTTCCCCTCTAGATGGCTCAAAGGGGTGCAACGGCAGATaGTGCTGGTGTCTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: FLETHRTKSFLSPLDGSKGCNGR*CWCLWC
Trigger: GCACCAGAGACACCAGCACCATCTGCCGTTGCACCC...CTTTGAGCCATCTAGAGGGGAAAGAAAAGACTTTGTTCTGTGTGTTTCAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CCA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCAAATCCCTTTTCTGGTTaGAGCCAGCAGCGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSNPFSG*SQQREG
Trigger: ACCTTCCCGCTGCTGGCTCCAACCAGAAAAGGGATT...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp AGAATTTCTGTTCAAGGAAAGCAGATAACAGACAGGGTTAAGGGCATTTGCTTGCTTGAGGGTACTGACTaGCAGAGCAGGAGCCCCGTT +
Preference number: 4 (lower is better)
Translates to: RISVQGKQITDRVKGICLLEGTD*QSRSPV
Trigger: AACGGGGCTCCTGCTCTGCCAGTCAGTACCCTCAAG...CAAGCAAATGCCCTTAACCCTGTCTGTTATCTGCTTTCCTTGAACAGAAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCATTGAACCACTGTTCCTaGCGTGCTGGGTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSLNHCS*RAGFGG
Trigger: ACCTCCAAACCCAGCACGCCAGGAACAGTGGTTCAA...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR TCA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCATGCCTGCAGGATAACTaGAGTTCAACAGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSCLQDN*SSTAHW
Trigger: CCAATGGGCTGTTGAACTTCAGTTATCCTGCAGGCA...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR TCA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCCCAGATTTCTGTGCCTaGTTCCAGTCGAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFPDFCA*FQSSCI
Trigger: GATGCAGCTCGACTGGAATCAGGCACAGAAATCTGG...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR TCA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCGGTTTCTGCAGGAATTaGATGCCTAGCACGCCTTCC +
Preference number: 4 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFGFCRN*MPSTPS
Trigger: GGAAGGCGTGCTAGGCATTCAATTCCTGCAGAAACC...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCGCAGTGAGTCAAATCTaGCCCACCATCTGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKIAVSQI*PTICFC
Trigger: ACAGAAACAGATGGTGGGTCAGATTTGACTCACTGC...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp TTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAATTCATTCACATCTGTaGAGAGCTTCGGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: FPSRWLKDCSDFPRAKREIHSHL*RASGPQ
Trigger: CTGAGGACCCGAAGCTCTGCACAGATGTGAATGAAT...TTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCATTCATTCACATCTGTaGAGAGCTTCGGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKIIHSHL*RASGPQ
Trigger: CTGAGGACCCGAAGCTCTGCACAGATGTGAATGAAT...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp AATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTACACATACTGGCCACACAGTGCTaGTGTAAGCGGGGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: NPSSLTLLISEMGLELHILATQC*CKRGRV
Trigger: GACCCTGCCCCGCTTACAGCAGCACTGTGTGGCCAG...TATGTGTAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp ACTATGTTGCCTGCTTTTTACTGTACACATGGCTGGCAAAGAGAAGGGAACTTGGTCGAGCTGCATCACTaGCTGATTCTGTCTCAAGGT +
Preference number: 4 (lower is better)
Translates to: TMLPAFYCTHGWQREGNLVELHH*LILSQG
Trigger: ACCTTGAGACAGAATCAGGCAGTGATGCAGCTCGAC...CAAGTTCCCTTCTCTTTGCCAGCCATGTGTACAGTAAAAAGCAGGCAACATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCACCCTGGTGTGTCTCATaGAGAAGCATCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSPWCVS*RSICFS
Trigger: TGAGAAGCAGATGCTTCTGCATGAGACACACCAGGG...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp GGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGACATCCATTCTGGCCATaGTCCCAGAAGACACAGAGC +
Preference number: 4 (lower is better)
Translates to: GSKIVQIFHGQRGKILFRHPFWP*SQKTQS
Trigger: GCTCTGTGTCTTCTGGGAGCATGGCCAGAATGGATG...TCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR GCA 90 bp CAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATAGGCAGAGCGAGAGCTaGAGATGCAGTGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: QRLFRFSTGKEGRSYSEDRQSES*RCSEVL
Trigger: CAGCACCTCACTGCATCTGCAGCTCTCGCTCTGCCT...ATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp GTTGTCGGTATGAAAGTCCTCTTAGGCTCGTTTTCCTGCTTCATTTTAAGATTTTATTGCTCCCGGACCTaGTGGCTGAGGAGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: VVGMKVLLGSFSCFILRFYCSRT*WLRRQY
Trigger: GTACTGCCTCCTCAGCCAGCAGGTCCGGGAGCAATA...AAATCTTAAAATGAAGCAGGAAAACGAGCCTAAGAGGACTTTCATACCGACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp AATGTCATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGTATTGCTCCCGGACCTaGTGGCTGAGGAGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: NVMNYPMPLRHRIIWLQVYCSRT*WLRRQY
Trigger: GTACTGCCTCCTCAGCCAGCAGGTCCGGGAGCAATA...CACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCATGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp CACGCCTTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACGACCATTTCCCATATTaGTCCCGGACCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HAFHNILHIADMVNFLKHDHFPY*SRTCWL
Trigger: CAGCCAGCAGGTCCGGGAGCAATATGGGAAATGGTC...GTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAAGGCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR GCA 90 bp AGAATTTCTGTTCAAGGAAAGCAGATAACAGACAGGGTTAAGGGCATTTGCTTGGGTAGTGTAGGGCAGTaGAAGAAGCTCCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RISVQGKQITDRVKGICLGSVGQ*KKLQLW
Trigger: CCAGAGCTGGAGCTTCTTGCACTGCCCTACACTACC...CAAGCAAATGCCCTTAACCCTGTCTGTTATCTGCTTTCCTTGAACAGAAATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCTCCAGCTGTGTGTTCTaGTTCCTCAAGCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFSSCVF*FLKQQL
Trigger: CAGCTGCTGCTTGAGGAAGCAGAACACACAGCTGGA...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTCCTCAGCCAGCAACTTaGCCATCCCTGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFPQPAT*PSLGHQ
Trigger: CTGGTGACCCAGGGATGGGCAAGTTGCTGGCTGAGG...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596991.6
CDS-3UTR CCA 90 bp GTTGTCGGTATGAAAGTCCTCTTAGGCTCGTTTTCCTGCTTCATTTTAAGATTTGGTGGCAGACGTCTGTaGTCCCAGCTGCTACTACTC +
Preference number: 4 (lower is better)
Translates to: VVGMKVLLGSFSCFILRFGGRRL*SQLLLL
Trigger: GAGTAGTAGCAGCTGGGACCACAGACGTCTGCCACC...AAATCTTAAAATGAAGCAGGAAAACGAGCCTAAGAGGACTTTCATACCGACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp TTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACAGAAACCGGGCACAGCCCCTaGAGTCCTGGGTTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: FHNILHIADMVNFLKHTETGHSP*SPGFQL
Trigger: GAGCTGAAACCCAGGACTCCAGGGGCTGTGCCCGGT...TTCTGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CCA 90 bp AATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTACACATAACCGGGCACAGCCCCTaGAGTCCTGGGTTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: NPSSLTLLISEMGLELHITGHSP*SPGFQL
Trigger: GAGCTGAAACCCAGGACTCCAGGGGCTGTGCCCGGT...TATGTGTAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp CACGCCTTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACCACCACAGAAGGGCCTaGGTCACCAGATTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: HAFHNILHIADMVNFLKHHHRRA*VTRFLC
Trigger: GCACAGAAATCTGGTGACCCAGGCCCTTCTGTGGTG...GTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAAGGCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp CAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTGCCCATCCCTGGAATaGAGACAAGGCCCACCACAG +
Preference number: 4 (lower is better)
Translates to: QRLFRFSTGKEGRSYSEDCPSLE*RQGPPQ
Trigger: CTGTGGTGGGCCTTGTCTCCATTCCAGGGATGGGCA...ATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000392965.7
CDS-3UTR CCA 90 bp CACGCCTTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACTCCTGCAGCAAGCCCTaGTGTGTCTCATGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: HAFHNILHIADMVNFLKHSCSKP*CVSCRS
Trigger: GCTTCTGCATGAGACACACCAGGGCTTGCTGCAGGA...GTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAAGGCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CCA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCAGAAGGTGAAGGTAACTaGGGAGCTGAGGTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSEGEGN*GAEVLG
Trigger: ACCCAAAACCTCAGCTCCCCAGTTACCTTCACCTTC...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAACGGCAGATGGTGCTaGTGTCTCTGGTGCCTATTG +
Preference number: 4 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFNGRWC*CLWCLL
Trigger: CAATAGGCACCAGAGACACCAGCACCATCTGCCGTT...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CCA 90 bp GACACAAATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTAGGGTGCAACGGCAGATaGTGCTGGTGTCTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: DTNPSSLTLLISEMGLELGCNGR*CWCLWC
Trigger: GCACCAGAGACACCAGCACCATCTGCCGTTGCACCC...TAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATTTGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp AATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTACACATAGGCCACTGTCACAGCTaGGACTCCGTAGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: NPSSLTLLISEMGLELHIGHCHS*DSVAHR
Trigger: CCTGTGGGCTACGGAGTCCCAGCTGTGACAGTGGCC...TATGTGTAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTATAAATCCCTTTTCTaGTTGGAGCCAGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKIYKSLF*LEPAAG
Trigger: TCCCGCTGCTGGCTCCAACCAGAAAAGGGATTTATA...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp TTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAATATAAATCCCTTTTCTaGTTGGAGCCAGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: FPSRWLKDCSDFPRAKREYKSLF*LEPAAG
Trigger: TCCCGCTGCTGGCTCCAACCAGAAAAGGGATTTATA...TTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCATTAGCCCGGTGTGGTaGTACACACCTGTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKIISPVW*YTPVVS
Trigger: TGAAACTACAGGTGTGTACCACCACACCGGGCTAAT...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp GACACAAATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTAAGCCTCCCGAGTAGCTaGGACTACAGTCGCCCACCA +
Preference number: 4 (lower is better)
Translates to: DTNPSSLTLLISEMGLELSLPSS*DYSRPP
Trigger: TGGTGGGCGACTGTAGTCCCAGCTACTCGGGAGGCT...TAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATTTGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp GACACAAATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTACAGGCTGGAGTGCATTaGCGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: DTNPSSLTLLISEMGLELQAGVH*RDLGSL
Trigger: CAGTGAGCCGAGATCGCGCCAATGCACTCCAGCCTG...TAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATTTGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR TCA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGCTGCATCACTGCCTaGTTCTGTCTCAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFSCITA*FCLKVT
Trigger: TGTCACCTTGAGACAGAATCAGGCAGTGATGCAGCT...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR TCA 90 bp GGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAACCTTGTGTCCGGTTTaGTCAATTGCCACGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GSKIVQIFHGQRGKILFRTLCPV*SIATRK
Trigger: CTTCCTCGTGGCAATTGATCAAACCGGACACAAGGT...TCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR TCA 90 bp ACTATGTTGCCTGCTTTTTACTGTACACATGGCTGGCAAAGAGAAGGGAACTTGGGAAATGTTCCCAGCTaGGTTGACAAAGCAATGCTC +
Preference number: 4 (lower is better)
Translates to: TMLPAFYCTHGWQREGNLGNVPS*VDKAML
Trigger: GAGCATTGCTTTGTCAACTCAGCTGGGAACATTTCC...CAAGTTCCCTTCTCTTTGCCAGCCATGTGTACAGTAAAAAGCAGGCAACATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp AGAATTTCTGTTCAAGGAAAGCAGATAACAGACAGGGTTAAGGGCATTTGCTTGGTTGAGGATCAGGAGTaGCTTGAGGGTACTGACTGG +
Preference number: 4 (lower is better)
Translates to: RISVQGKQITDRVKGICLVEDQE*LEGTDW
Trigger: CCAGTCAGTACCCTCAAGTCACTCCTGATCCTCAAC...CAAGCAAATGCCCTTAACCCTGTCTGTTATCTGCTTTCCTTGAACAGAAATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp TACACATGGCTGGCAAAGAGAAGGGAACTTGGAGCCGCCATTTTGGACATGCCTTTTGTGTCACATGACTaGTATATGAAGTTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: YTWLAKRRELGAAILDMPFVSHD*YMKFKL
Trigger: GAGCTTGAACTTCATATATCAGTCATGTGACACAAA...AGGCATGTCCAAAATGGCGGCTCCAAGTTCCCTTCTCTTTGCCAGCCATGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp ACTATGTTGCCTGCTTTTTACTGTACACATGGCTGGCAAAGAGAAGGGAACTTGTTCACATTATTGTGGTaGTCTGGAGTGGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TMLPAFYCTHGWQREGNLFTLLW*SGVEPA
Trigger: TGCAGGCTCCACTCCAGATCACCACAATAATGTGAA...CAAGTTCCCTTCTCTTTGCCAGCCATGTGTACAGTAAAAAGCAGGCAACATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp GGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGACCCTGGTGTGTCTCATaGAGAAGCATCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GSKIVQIFHGQRGKILFRPWCVS*RSICFS
Trigger: TGAGAAGCAGATGCTTCTGCATGAGACACACCAGGG...TCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp TTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAATTTGGGTGTCGTTGTTaGTCAGAAAGGCAGAGATCA +
Preference number: 4 (lower is better)
Translates to: FPSRWLKDCSDFPRAKREFGCRC*SERQRS
Trigger: TGATCTCTGCCTTTCTGAGCAACAACGACACCCAAA...TTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp GACACAAATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTATGGTGCCTATTGTGCTaGAGCCTGTGGTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: DTNPSSLTLLISEMGLELWCLLC*SLWWPS
Trigger: ACTGGGCCACCACAGGCTGCAGCACAATAGGCACCA...TAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATTTGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp GCCTTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACATGCAACGGCAGATGGTaGTGGTGTCTCTGGTGCCTA +
Preference number: 4 (lower is better)
Translates to: AFHNILHIADMVNFLKHTCNGRW*WCLWCL
Trigger: TAGGCACCAGAGACACCAGCACCATCTGCCGTTGCA...TGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR GCA 90 bp AAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTATTGCTCCCGGACCTaGTGGCTGAGGAGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: KDCSDFPRAKREDLIQKIYCSRT*WLRRQY
Trigger: GTACTGCCTCCTCAGCCAGCAGGTCCGGGAGCAATA...AATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp TTTCTTGAAACACACAGAACAAAGTCTTTTCTTTCCCCTCTAGATGGCTCAAAGGACCATTTCCCATATTaGTCCCGGACCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FLETHRTKSFLSPLDGSKDHFPY*SRTCWL
Trigger: CAGCCAGCAGGTCCGGGAGCAATATGGGAAATGGTC...CTTTGAGCCATCTAGAGGGGAAAGAAAAGACTTTGTTCTGTGTGTTTCAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp TCTATATCAAGCAAAGGGCACGCAGAATCCCATGCACCCATCATGTATGTAATAGAGGCTTGGCAAGGATaGCTGTTACCAAGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: SISSKGHAESHAPIMYVIEAWQG*LLPSGL
Trigger: TAACCCACTTGGTAACAGGCATCCTTGCCAAGCCTC...TATTACATACATGATGGGTGCATGGGATTCTGCGTGCCCTTTGCTTGATATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCATTTGGCCTCCCAGAGTaGTGGCATTACAAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSFGLPE*WHYKLE
Trigger: TTCAAGCTTGTAATGCCAGCACTCTGGGAGGCCAAA...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCAGTAAGATGCTCTGGATaGTGTTATTGGCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSVRCSG*CYWPSL
Trigger: CAGGCTTGGCCAATAACACCATCCAGAGCATCTTAC...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp TTTCTTGAAACACACAGAACAAAGTCTTTTCTTTCCCCTCTAGATGGCTCAAAGCACCACAGAAGGGCCTaGGTCACCAGATTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: FLETHRTKSFLSPLDGSKHHRRA*VTRFLC
Trigger: GCACAGAAATCTGGTGACCCAGGCCCTTCTGTGGTG...CTTTGAGCCATCTAGAGGGGAAAGAAAAGACTTTGTTCTGTGTGTTTCAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000392965.7
CDS-3UTR CCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTTTGTGCTGCAGCCTGTaGTGGCCCAGTGACCACATC +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFLCCSL*WPSDHI
Trigger: GATGTGGTCACTGGGCCACCACAGGCTGCAGCACAA...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CCA 90 bp CAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATAGAGTGACCAAGATATaGGCCACAGCTGGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: QRLFRFSTGKEGRSYSEDRVTKI*ATAGRP
Trigger: TGGACGGCCAGCTGTGGCCCATATCTTGGTCACTCT...ATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp AGAATTTCTGTTCAAGGAAAGCAGATAACAGACAGGGTTAAGGGCATTTGCTTGGGGCACAGAGGAAGGTaGAGGAAAAGTCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: RISVQGKQITDRVKGICLGHRGR*RKSLLG
Trigger: ACCCAAGAGACTTTTCCTCCACCTTCCTCTGTGCCC...CAAGCAAATGCCCTTAACCCTGTCTGTTATCTGCTTTCCTTGAACAGAAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp AATGTCATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGGTGATCTTCCTGCTTTaGCCTCCCAGAGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: NVMNYPMPLRHRIIWLQVVIFLL*PPRVLA
Trigger: TGCCAGCACTCTGGGAGGCCAAAGCAGGAAGATCAC...CACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCATGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR TCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTTCTTGCTCAGGCCTCTaGGGACATCCTCTAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFSCSGL*GHPLGH
Trigger: ATGGCCTAGAGGATGTCCTCAGAGGCCTGAGCAAGA...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR TCA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCGATTCTGTCTCAAGGTaGCACTCCTGTCTACTTGCT +
Preference number: 4 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFDSVSR*HSCLLA
Trigger: AGCAAGTAGACAGGAGTGTCACCTTGAGACAGAATC...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR TCA 90 bp GCCTTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACACCAGATTTCTGTGCCTaGTTCCAGTCGAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: AFHNILHIADMVNFLKHTPDFCA*FQSSCI
Trigger: GATGCAGCTCGACTGGAATCAGGCACAGAAATCTGG...TGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR TCA 90 bp AAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTCTGTCTCGGGATCACTaGACGGTGGGAGAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: KDCSDFPRAKREDLIQKILSRDH*TVGEGE
Trigger: TTCACCTTCTCCCACCGTTCAGTGATCCCGAGACAG...AATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR TCA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCCTAGCAGTAGAAACCTaGTTTCTAGGAATTTCGGCT +
Preference number: 4 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKILAVET*FLGISA
Trigger: AGCCGAAATTCCTAGAAATCAGGTTTCTACTGCTAG...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp ACTATGTTGCCTGCTTTTTACTGTACACATGGCTGGCAAAGAGAAGGGAACTTGCAAATGAGCTTTGGCTaGCACTATGTTGCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TMLPAFYCTHGWQREGNLQMSFG*HYVACF
Trigger: AAAGCAGGCAACATAGTGTCAGCCAAAGCTCATTTG...CAAGTTCCCTTCTCTTTGCCAGCCATGTGTACAGTAAAAAGCAGGCAACATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp AATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTACACATATGTCCCGGGCTCAAGTaGTCTTCCTGCTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: NPSSLTLLISEMGLELHICPGLK*SSCFGL
Trigger: GAGGCCAAAGCAGGAAGATCACTTGAGCCCGGGACA...TATGTGTAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp CTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTACAGCCAGACACAGAATaGGAGAAAGACGAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: LDGSKIVQIFHGQRGKILQPDTE*EKDEKD
Trigger: GTCTTTCTCGTCTTTCTCGCATTCTGTGTCTGGCTG...TAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCCAGCCAGACACAGAATaGGAGAAAGACGAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFQPDTE*EKDEKD
Trigger: GTCTTTCTCGTCTTTCTCGCATTCTGTGTCTGGCTG...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp CTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTAATTCATTCACATCTGTaGAGAGCTTCGGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LDGSKIVQIFHGQRGKILIHSHL*RASGPQ
Trigger: CTGAGGACCCGAAGCTCTGCACAGATGTGAATGAAT...TAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp ATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGATCCCCATTCATTCACATCTGTaGAGAGCTTCGGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: MNYPMPLRHRIIWLQVIPIHSHL*RASGPQ
Trigger: CTGAGGACCCGAAGCTCTGCACAGATGTGAATGAAT...GGGGATCACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp ATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGATCCCCCTGTCTACTTGCTTCTaGACCTCCAGGGACAATTCT +
Preference number: 4 (lower is better)
Translates to: MNYPMPLRHRIIWLQVIPLSTCF*TSRDNS
Trigger: AGAATTGTCCCTGGAGGTGCAGAAGCAAGTAGACAG...GGGGATCACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp GCCTTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACAACACTCCTGTCTACTTaGTTCTGCACCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: AFHNILHIADMVNFLKHTTLLST*FCTSRD
Trigger: GTCCCTGGAGGTGCAGAAGCAAGTAGACAGGAGTGT...TGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR GCA 90 bp GCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGTCACCAGATTTCTGTaGCTGATTCCAGTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: AQRLFRFSTGKEGRSYSEVTRFL*LIPVEL
Trigger: CAGCTCGACTGGAATCAGGCACAGAAATCTGGTGAC...TTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTCCTCAGCCAGCAACTTaGCCATCCCTGGAATGGAGA +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFPQPAT*PSLEWR
Trigger: TCTCCATTCCAGGGATGGGCAAGTTGCTGGCTGAGG...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000392965.7
CDS-3UTR GCA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCATTTGGGTGTCGTTGTTaGTCAGAAAGGCAGAGATCA +
Preference number: 4 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSFGCRC*SERQRS
Trigger: TGATCTCTGCCTTTCTGAGCAACAACGACACCCAAA...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp AATGTCATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGCATCCATTCTGGCCATaGTCCCAGAAGACACAGAGC +
Preference number: 4 (lower is better)
Translates to: NVMNYPMPLRHRIIWLQVHPFWP*SQKTQS
Trigger: GCTCTGTGTCTTCTGGGAGCATGGCCAGAATGGATG...CACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCATGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp TTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACAGAAAGGCAGAGCGAGAGCTaGAGATGCAGTGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: FHNILHIADMVNFLKHTERQSES*RCSEVL
Trigger: CAGCACCTCACTGCATCTGCAGCTCTCGCTCTGCCT...TTCTGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR GCA 90 bp GACACAAATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTAGACCATTTCCCATATTaGTCCCGGACCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: DTNPSSLTLLISEMGLELDHFPY*SRTCWL
Trigger: CAGCCAGCAGGTCCGGGAGCAATATGGGAAATGGTC...TAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATTTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTGGCTGACACTATGTTaGCTGCTTTTTACTGTACAC +
Preference number: 4 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKIWLTLC*LLFTVH
Trigger: GTGTACAGTAAAAAGCAGGCAACATAGTGTCAGCCA...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp AATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTACACATAGCTCACTGCCAGCTCTaGCTCCTGGGTTCACACCAT +
Preference number: 4 (lower is better)
Translates to: NPSSLTLLISEMGLELHIAHCQL*LLGSHH
Trigger: ATGGTGTGAACCCAGGAGGCAGAGCTGGCAGTGAGC...TATGTGTAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCGTAAGATGCTCTGGATaGTGTTATTGGCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFVRCSG*CYWPSL
Trigger: CAGGCTTGGCCAATAACACCATCCAGAGCATCTTAC...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp CTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTAGCCTGTAAGATGCTCTaGATGGTGTTATTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LDGSKIVQIFHGQRGKILACKML*MVLLAK
Trigger: CTTGGCCAATAACACCATCCAGAGCATCTTACAGGC...TAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTCAACTTGCCCATCCCTaGAATGGAGACAAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFQLAHP*NGDKAH
Trigger: GTGGGCCTTGTCTCCATTCCAGGGATGGGCAAGTTG...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000392965.7
CDS-3UTR CCA 90 bp CAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATGGGGAGCTGAGGTTTTaGGTGTCGTTGTTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: QRLFRFSTGKEGRSYSEDGELRF*VSLLLR
Trigger: TCTGAGCAACAACGACACCCAAAACCTCAGCTCCCC...ATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp CAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATAACGGCAGATGGTGCTaGTGTCTCTGGTGCCTATTG +
Preference number: 4 (lower is better)
Translates to: QRLFRFSTGKEGRSYSEDNGRWC*CLWCLL
Trigger: CAATAGGCACCAGAGACACCAGCACCATCTGCCGTT...ATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CCA 90 bp AATGTCATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGAACGGCAGATGGTGCTaGTGTCTCTGGTGCCTATTG +
Preference number: 4 (lower is better)
Translates to: NVMNYPMPLRHRIIWLQVNGRWC*CLWCLL
Trigger: CAATAGGCACCAGAGACACCAGCACCATCTGCCGTT...CACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCATGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp GCCTTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACAAATCCCTTTTCTGGTTaGAGCCAGCAGCGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: AFHNILHIADMVNFLKHTNPFSG*SQQREG
Trigger: ACCTTCCCGCTGCTGGCTCCAACCAGAAAAGGGATT...TGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CCA 90 bp TTTCTTGAAACACACAGAACAAAGTCTTTTCTTTCCCCTCTAGATGGCTCAAAGGGATCCTCCTCACGGTaGGAGAAGGTGAAGGTAACT +
Preference number: 4 (lower is better)
Translates to: FLETHRTKSFLSPLDGSKGSSSR*EKVKVT
Trigger: AGTTACCTTCACCTTCTCCCACCGTGAGGAGGATCC...CTTTGAGCCATCTAGAGGGGAAAGAAAAGACTTTGTTCTGTGTGTTTCAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392965.7
CDS-3UTR CCA 90 bp AATGTCATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGCAACTTGCCCATCCCTaGGTCACCAGATTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: NVMNYPMPLRHRIIWLQVQLAHP*VTRFLC
Trigger: GCACAGAAATCTGGTGACCCAGGGATGGGCAAGTTG...CACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCATGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp AATGTCATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGGGCCTCCCAGAGTGCTaGCATTACAAGCTTGAACCA +
Preference number: 4 (lower is better)
Translates to: NVMNYPMPLRHRIIWLQVGLPEC*HYKLEP
Trigger: TGGTTCAAGCTTGTAATGCCAGCACTCTGGGAGGCC...CACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCATGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR TCA 90 bp AATGTCATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGAGCTGCATCACTGCCTaGTTCTGTCTCAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: NVMNYPMPLRHRIIWLQVSCITA*FCLKVT
Trigger: TGTCACCTTGAGACAGAATCAGGCAGTGATGCAGCT...CACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCATGACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR TCA 90 bp GACACAAATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTACCAGATTTCTGTGCCTaGTTCCAGTCGAGCTGCATC +
Preference number: 4 (lower is better)
Translates to: DTNPSSLTLLISEMGLELPDFCA*FQSSCI
Trigger: GATGCAGCTCGACTGGAATCAGGCACAGAAATCTGG...TAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATTTGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR TCA 90 bp AATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTACACATACTGTCTCGGGATCACTaGACGGTGGGAGAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: NPSSLTLLISEMGLELHILSRDH*TVGEGE
Trigger: TTCACCTTCTCCCACCGTTCAGTGATCCCGAGACAG...TATGTGTAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR TCA 90 bp TGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCATCTGGACACTTCACTATTaGGGGAGGAGAGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: WPRLCTFDTNPSSLTLLIWTLHY*GRRVCF
Trigger: AAAACAGACTCTCCTCCCTCAATAGTGAAGTGTCCA...GATGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR TCA 90 bp CACGCCTTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACAGCCTGCAATATCTCTaGGGTGTGTCTGTATGTGCT +
Preference number: 4 (lower is better)
Translates to: HAFHNILHIADMVNFLKHSLQYL*GVSVCA
Trigger: AGCACATACAGACACACCTCAGAGATATTGCAGGCT...GTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAAGGCGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp AAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTACACTCCTGTCTACTTaGTTCTGCACCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: KDCSDFPRAKREDLIQKITLLST*FCTSRD
Trigger: GTCCCTGGAGGTGCAGAAGCAAGTAGACAGGAGTGT...AATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp AATGTCATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGTCATGCAGAAGCATCTaGTTCTCAGGTTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: NVMNYPMPLRHRIIWLQVSCRSI*FSGSRT
Trigger: GGTCCTGGAACCTGAGAAGCAGATGCTTCTGCATGA...CACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCATGACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp TTTCTTGAAACACACAGAACAAAGTCTTTTCTTTCCCCTCTAGATGGCTCAAAGCCCTGGTGTGTCTCATaGAGAAGCATCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: FLETHRTKSFLSPLDGSKPWCVS*RSICFS
Trigger: TGAGAAGCAGATGCTTCTGCATGAGACACACCAGGG...CTTTGAGCCATCTAGAGGGGAAAGAAAAGACTTTGTTCTGTGTGTTTCAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp TTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACAGAATGCTGGTGTCTCTGGTaGCTATTGTGCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: FHNILHIADMVNFLKHTECWCLW*LLCCSL
Trigger: CAGGCTGCAGCACAATAGGCACCAGAGACACCAGCA...TTCTGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR GCA 90 bp AATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTACACATATGCAACGGCAGATGGTaGTGGTGTCTCTGGTGCCTA +
Preference number: 4 (lower is better)
Translates to: NPSSLTLLISEMGLELHICNGRW*WCLWCL
Trigger: TAGGCACCAGAGACACCAGCACCATCTGCCGTTGCA...TATGTGTAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp GCCTTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACATCCGGTTTGATCAATTaGCACGAGGAAGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: AFHNILHIADMVNFLKHTSGLIN*HEEEEV
Trigger: CACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGA...TGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR GCA 90 bp AGAATTTCTGTTCAAGGAAAGCAGATAACAGACAGGGTTAAGGGCATTTGCTTGAGCTGTCGCTTTAAATaGCAGCATCCTTGTGTTCCG +
Preference number: 4 (lower is better)
Translates to: RISVQGKQITDRVKGICLSCRFK*QHPCVP
Trigger: CGGAACACAAGGATGCTGGCATTTAAAGCGACAGCT...CAAGCAAATGCCCTTAACCCTGTCTGTTATCTGCTTTCCTTGAACAGAAATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp GCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAATGGTTCTCACTCTGTTaGCCACACTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: AQRLFRFSTGKEGRSYSEWFSLC*PHWSQT
Trigger: AGTTTGAGACCAGTGTGGGCAACAGAGTGAGAACCA...TTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp CACGCCTTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACGTAGAGGTACCAGGTTaGCAACAATGGTTACTTGGG +
Preference number: 4 (lower is better)
Translates to: HAFHNILHIADMVNFLKHVEVPG*QQWLLG
Trigger: CCCAAGTAACCATTGTTGGCAACCTGGTACCTCTAC...GTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAAGGCGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCGCACGCAGAATCCCATaGACCCATCATGTATGTAAT +
Preference number: 4 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFARRIP*THHVCN
Trigger: ATTACATACATGATGGGTGCATGGGATTCTGCGTGC...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp AAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTGTTATTGGCCAAGCCTaGCTTGTAGTCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: KDCSDFPRAKREDLIQKIVIGQA*LVVSAQ
Trigger: CTGGGCAGAGACTACAAGCCAGGCTTGGCCAATAAC...AATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTGTTATTGGCCAAGCCTaGCTTGTAGTCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFVIGQA*LVVSAQ
Trigger: CTGGGCAGAGACTACAAGCCAGGCTTGGCCAATAAC...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp GACACAAATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTAGTTATTGGCCAAGCCTaGCTTGTAGTCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: DTNPSSLTLLISEMGLELVIGQA*LVVSAQ
Trigger: CTGGGCAGAGACTACAAGCCAGGCTTGGCCAATAAC...TAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATTTGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTGGGGAGCTGAGGTTTTaGGTGTCGTTGTTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFGELRF*VSLLLR
Trigger: TCTGAGCAACAACGACACCCAAAACCTCAGCTCCCC...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp CAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATGGGATCACTGAACGGTaGGAGAAGGTGAAGGTAACT +
Preference number: 4 (lower is better)
Translates to: QRLFRFSTGKEGRSYSEDGITER*EKVKVT
Trigger: AGTTACCTTCACCTTCTCCCACCGTTCAGTGATCCC...ATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CCA 90 bp AATGTCATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGGGGATCACTGAACGGTaGGAGAAGGTGAAGGTAACT +
Preference number: 4 (lower is better)
Translates to: NVMNYPMPLRHRIIWLQVGITER*EKVKVT
Trigger: AGTTACCTTCACCTTCTCCCACCGTTCAGTGATCCC...CACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCATGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTAATCCCTTTTCTGGTTaGAGCCAGCAGCGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFNPFSG*SQQREG
Trigger: ACCTTCCCGCTGCTGGCTCCAACCAGAAAAGGGATT...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp TTTCTTGAAACACACAGAACAAAGTCTTTTCTTTCCCCTCTAGATGGCTCAAAGCTCCTGTTAGTGGGATaGCCTCAGGCAAGTCACTTA +
Preference number: 4 (lower is better)
Translates to: FLETHRTKSFLSPLDGSKLLLVG*PQASHL
Trigger: TAAGTGACTTGCCTGAGGCCATCCCACTAACAGGAG...CTTTGAGCCATCTAGAGGGGAAAGAAAAGACTTTGTTCTGTGTGTTTCAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp TCTTATTATGCAAATGAGCTTTGGCTGACACTATGTTGCCTGCTTTTTACTGTAAAGAAGCTCCAGCTCTaGGACCAGTTGGATGGGGTT +
Preference number: 4 (lower is better)
Translates to: SYYANELWLTLCCLLFTVKKLQL*DQLDGV
Trigger: AACCCCATCCAACTGGTCCCAGAGCTGGAGCTTCTT...TACAGTAAAAAGCAGGCAACATAGTGTCAGCCAAAGCTCATTTGCATAATAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCAAGGCAGATATTATGTaGTCTCTTGAACCAGCCTTA +
Preference number: 4 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKIKADIM*SLEPAL
Trigger: TAAGGCTGGTTCAAGAGACCACATAATATCTGCCTT...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp TTTCTTGAAACACACAGAACAAAGTCTTTTCTTTCCCCTCTAGATGGCTCAAAGGCTTGGGTGATAGAGTaGGACCCTGTGTCAAAAACA +
Preference number: 4 (lower is better)
Translates to: FLETHRTKSFLSPLDGSKAWVIE*DPVSKT
Trigger: TGTTTTTGACACAGGGTCTCACTCTATCACCCAAGC...CTTTGAGCCATCTAGAGGGGAAAGAAAAGACTTTGTTCTGTGTGTTTCAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp AAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTGCCTGCAGGATAACTaGAGTTCAACAGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: KDCSDFPRAKREDLIQKICLQDN*SSTAHW
Trigger: CCAATGGGCTGTTGAACTTCAGTTATCCTGCAGGCA...AATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR TCA 90 bp GACACAAATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTAACCTTGTGTCCGGTTTaGTCAATTGCCACGAGGAAG +
Preference number: 4 (lower is better)
Translates to: DTNPSSLTLLISEMGLELTLCPV*SIATRK
Trigger: CTTCCTCGTGGCAATTGATCAAACCGGACACAAGGT...TAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATTTGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR TCA 90 bp TCTATATCAAGCAAAGGGCACGCAGAATCCCATGCACCCATCATGTATGTAATACACATGACTGATATATaGAGTTCAAGCTCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: SISSKGHAESHAPIMYVIHMTDI*SSSSVS
Trigger: GGACACTGAGCTTGAACTTCATATATCAGTCATGTG...TATTACATACATGATGGGTGCATGGGATTCTGCGTGCCCTTTGCTTGATATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTCCAGCGCCTGTAAGATaGTCTGGATGGTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFPAPVR*SGWCYW
Trigger: CCAATAACACCATCCAGAGCATCTTACAGGCGCTGG...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp GTTGTCGGTATGAAAGTCCTCTTAGGCTCGTTTTCCTGCTTCATTTTAAGATTTCTGTCTACTTGCTTCTaGACCTCCAGGGACAATTCT +
Preference number: 4 (lower is better)
Translates to: VVGMKVLLGSFSCFILRFLSTCF*TSRDNS
Trigger: AGAATTGTCCCTGGAGGTGCAGAAGCAAGTAGACAG...AAATCTTAAAATGAAGCAGGAAAACGAGCCTAAGAGGACTTTCATACCGACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp GACACAAATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTAGTCGAGCTGCATCACTaGCTGATTCTGTCTCAAGGT +
Preference number: 4 (lower is better)
Translates to: DTNPSSLTLLISEMGLELVELHH*LILSQG
Trigger: ACCTTGAGACAGAATCAGGCAGTGATGCAGCTCGAC...TAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATTTGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTGTCACCAGATTTCTGTaGCTGATTCCAGTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFVTRFL*LIPVEL
Trigger: CAGCTCGACTGGAATCAGGCACAGAAATCTGGTGAC...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp GACACAAATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTAGTCACCAGATTTCTGTaGCTGATTCCAGTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: DTNPSSLTLLISEMGLELVTRFL*LIPVEL
Trigger: CAGCTCGACTGGAATCAGGCACAGAAATCTGGTGAC...TAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATTTGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTTCATGCAGAAGCATCTaGTTCTCAGGTTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFSCRSI*FSGSRT
Trigger: GGTCCTGGAACCTGAGAAGCAGATGCTTCTGCATGA...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp AGAATTTCTGTTCAAGGAAAGCAGATAACAGACAGGGTTAAGGGCATTTGCTTGTTTGGGTGTCGTTGTTaGTCAGAAAGGCAGAGATCA +
Preference number: 4 (lower is better)
Translates to: RISVQGKQITDRVKGICLFGCRC*SERQRS
Trigger: TGATCTCTGCCTTTCTGAGCAACAACGACACCCAAA...CAAGCAAATGCCCTTAACCCTGTCTGTTATCTGCTTTCCTTGAACAGAAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp AAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTCCGGTTTGATCAATTaGCACGAGGAAGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: KDCSDFPRAKREDLIQKISGLIN*HEEEEV
Trigger: CACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGA...AATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp GACACAAATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTATCCGGTTTGATCAATTaGCACGAGGAAGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: DTNPSSLTLLISEMGLELSGLIN*HEEEEV
Trigger: CACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGA...TAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATTTGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp AATGTCATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGAGCTGTCGCTTTAAATaGCAGCATCCTTGTGTTCCG +
Preference number: 4 (lower is better)
Translates to: NVMNYPMPLRHRIIWLQVSCRFK*QHPCVP
Trigger: CGGAACACAAGGATGCTGGCATTTAAAGCGACAGCT...CACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCATGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCCCTACCCTTGCTATTTaGCTAAATGATTTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKIPTLAI*LNDFSL
Trigger: TAAGGAGAAATCATTTAGGCAAATAGCAAGGGTAGG...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp CAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATGCCTGTAAGATGCTCTaGATGGTGTTATTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QRLFRFSTGKEGRSYSEDACKML*MVLLAK
Trigger: CTTGGCCAATAACACCATCCAGAGCATCTTACAGGC...ATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTGAAGGTGAAGGTAACTaGGGAGCTGAGGTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFEGEGN*GAEVLG
Trigger: ACCCAAAACCTCAGCTCCCCAGTTACCTTCACCTTC...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTGCACATTGCAGGGCATaGAAGATTTCCGGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFAHCRA*KISGFC
Trigger: GCAGAAACCGGAAATCTTCCATGCCCTGCAATGTGC...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp CTTTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGCTGCTTTTCATTAAATaGAAAACCTTACTGAGGACT +
Preference number: 4 (lower is better)
Translates to: LSPLDGSKIVQIFHGQRGLLFIK*KTLLRT
Trigger: AGTCCTCAGTAAGGTTTTCCATTTAATGAAAAGCAG...CCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp TCTATATCAAGCAAAGGGCACGCAGAATCCCATGCACCCATCATGTATGTAATACCAACAATGGTTACTTaGGGGGTAGCATTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: SISSKGHAESHAPIMYVIPTMVT*GVAFKV
Trigger: AACTTTGAATGCTACCCCCCAAGTAACCATTGTTGG...TATTACATACATGATGGGTGCATGGGATTCTGCGTGCCCTTTGCTTGATATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp CAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTCACCCTCATACAATaGGCCCCAGTAAAACAGTGG +
Preference number: 4 (lower is better)
Translates to: QRLFRFSTGKEGRSYSEDFTLIQ*APVKQW
Trigger: CCACTGTTTTACTGGGGCCCATTGTATGAGGGTGAA...ATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp GCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGGAGGAAAAGTCTCTTaGGTAACTGCCAAACTTCAC +
Preference number: 4 (lower is better)
Translates to: AQRLFRFSTGKEGRSYSEGGKVS*VTAKLH
Trigger: GTGAAGTTTGGCAGTTACCCAAGAGACTTTTCCTCC...TTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp AGAATTTCTGTTCAAGGAAAGCAGATAACAGACAGGGTTAAGGGCATTTGCTTGCTGAACATCATGGTCTaGAAACTATGGGCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: RISVQGKQITDRVKGICLLNIMV*KLWAVS
Trigger: ACTCACTGCCCATAGTTTCCAGACCATGATGTTCAG...CAAGCAAATGCCCTTAACCCTGTCTGTTATCTGCTTTCCTTGAACAGAAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp ATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGATCCCCAGGCATAGGATAATATaGCTTCAAGTGATCCCCAAG +
Preference number: 4 (lower is better)
Translates to: MNYPMPLRHRIIWLQVIPRHRII*LQVIPK
Trigger: CTTGGGGATCACTTGAAGCCATATTATCCTATGCCT...GGGGATCACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp AATGTCATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGATGAGTCACTGTGCCTaGCCGAGACTCTGTACATTT +
Preference number: 4 (lower is better)
Translates to: NVMNYPMPLRHRIIWLQVMSHCA*PRLCTF
Trigger: AAATGTACAGAGTCTCGGCCAGGCACAGTGACTCAT...CACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCATGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
3UTR CAA 72 bp GGAAAGCAGATAACAGACAGGGTTAAGGGCATTTGCTaGGAATATTTAGGAGTTTTGCAGGTCATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: GKQITDRVKGIC*EYLGVLQVIPL
Trigger: CAAAGGAATGACCTGCAAAACTCCTAAATATTCCAAGCAAATGCCCTTAACCCTGTCTGTTATCTGCTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp TCTTATTATGCAAATGAGCTTTGGCTGACACTATGTTGCCTGCTTTTTACTGTAGATTCTGTCTCAAGGTaGCACTCCTGTCTACTTGCT +
Preference number: 4 (lower is better)
Translates to: SYYANELWLTLCCLLFTVDSVSR*HSCLLA
Trigger: AGCAAGTAGACAGGAGTGTCACCTTGAGACAGAATC...TACAGTAAAAAGCAGGCAACATAGTGTCAGCCAAAGCTCATTTGCATAATAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp CAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTGGACACTTCACTATTaGGGGAGGAGAGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: QRLFRFSTGKEGRSYSEDWTLHY*GRRVCF
Trigger: AAAACAGACTCTCCTCCCTCAATAGTGAAGTGTCCA...ATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR TCA 90 bp GCCTTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACATGGACACTTCACTATTaGGGGAGGAGAGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: AFHNILHIADMVNFLKHTWTLHY*GRRVCF
Trigger: AAAACAGACTCTCCTCCCTCAATAGTGAAGTGTCCA...TGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR TCA 90 bp CAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTCTGCATGTTGGTGTaGAGACGAAAGAAGACAGTG +
Preference number: 4 (lower is better)
Translates to: QRLFRFSTGKEGRSYSEDFCMLV*RRKKTV
Trigger: CACTGTCTTCTTTCGTCTTCACACCAACATGCAGAA...ATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp AATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTACACATACCAGCGCCTGTAAGATaGTCTGGATGGTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: NPSSLTLLISEMGLELHIPAPVR*SGWCYW
Trigger: CCAATAACACCATCCAGAGCATCTTACAGGCGCTGG...TATGTGTAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTCTGTCTACTTGCTTCTaGACCTCCAGGGACAATTCT +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFLSTCF*TSRDNS
Trigger: AGAATTGTCCCTGGAGGTGCAGAAGCAAGTAGACAG...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp CAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTGGGTGTCGTTGTTaGTCAGAAAGGCAGAGATCA +
Preference number: 4 (lower is better)
Translates to: QRLFRFSTGKEGRSYSEDFGCRC*SERQRS
Trigger: TGATCTCTGCCTTTCTGAGCAACAACGACACCCAAA...ATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp AAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTAGCTGTCGCTTTAAATaGCAGCATCCTTGTGTTCCG +
Preference number: 4 (lower is better)
Translates to: KDCSDFPRAKREDLIQKISCRFK*QHPCVP
Trigger: CGGAACACAAGGATGCTGGCATTTAAAGCGACAGCT...AATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR GCA 90 bp TCTTATTATGCAAATGAGCTTTGGCTGACACTATGTTGCCTGCTTTTTACTGTATGGAAGCTTCCAGCTTaGTTGTCTATGTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SYYANELWLTLCCLLFTVWKLPA*LSMSAA
Trigger: AGCTGCAGACATAGACAAGCAAGCTGGAAGCTTCCA...TACAGTAAAAAGCAGGCAACATAGTGTCAGCCAAAGCTCATTTGCATAATAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp TGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCATCCAAGTAGTCTTACTTTaGTCATCAGTGAAATGGGGT +
Preference number: 4 (lower is better)
Translates to: WPRLCTFDTNPSSLTLLIQVVLL*SSVKWG
Trigger: ACCCCATTTCACTGATGAGCAAAGTAAGACTACTTG...GATGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTGCCTGTAAGATGCTCTaGATGGTGTTATTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFACKML*MVLLAK
Trigger: CTTGGCCAATAACACCATCCAGAGCATCTTACAGGC...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp GACACAAATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTAGCCTGTAAGATGCTCTaGATGGTGTTATTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: DTNPSSLTLLISEMGLELACKML*MVLLAK
Trigger: CTTGGCCAATAACACCATCCAGAGCATCTTACAGGC...TAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATTTGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CCA 90 bp TTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACAGAAGGGATCACTGAACGGTaGGAGAAGGTGAAGGTAACT +
Preference number: 4 (lower is better)
Translates to: FHNILHIADMVNFLKHTEGITER*EKVKVT
Trigger: AGTTACCTTCACCTTCTCCCACCGTTCAGTGATCCC...TTCTGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CCA 90 bp AAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTATAAATCCCTTTTCTaGTTGGAGCCAGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: KDCSDFPRAKREDLIQKIYKSLF*LEPAAG
Trigger: TCCCGCTGCTGGCTCCAACCAGAAAAGGGATTTATA...AATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CCA 90 bp GACACAAATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTATATAAATCCCTTTTCTaGTTGGAGCCAGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: DTNPSSLTLLISEMGLELYKSLF*LEPAAG
Trigger: TCCCGCTGCTGGCTCCAACCAGAAAAGGGATTTATA...TAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATTTGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR TCA 90 bp AATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTACACATAGATTCTGTCTCAAGGTaGCACTCCTGTCTACTTGCT +
Preference number: 4 (lower is better)
Translates to: NPSSLTLLISEMGLELHIDSVSR*HSCLLA
Trigger: AGCAAGTAGACAGGAGTGTCACCTTGAGACAGAATC...TATGTGTAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR TCA 90 bp GGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAATCTTATTATGCAAATaGGCTTTGGCTGACACTATG +
Preference number: 4 (lower is better)
Translates to: GSKIVQIFHGQRGKILFRILLCK*ALADTM
Trigger: CATAGTGTCAGCCAAAGCTCATTTGCATAATAAGAT...TCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp TTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACAGAACAGCCAGACACAGAATaGGAGAAAGACGAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: FHNILHIADMVNFLKHTEQPDTE*EKDEKD
Trigger: GTCTTTCTCGTCTTTCTCGCATTCTGTGTCTGGCTG...TTCTGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR GCA 90 bp CTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTACAAGTGGGTTACTTCTaGACTATTTATAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: LDGSKIVQIFHGQRGKILQVGYF*TIYREG
Trigger: TCCTTCTCTATAAATAGTGCAGAAGTAACCCACTTG...TAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTTCCTTTCCCTCCAGGTaGACTAAAATAGGGAAGCTA +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFSFPSR*TKIGKL
Trigger: TAGCTTCCCTATTTTAGTGCACCTGGAGGGAAAGGA...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp TTTCTTGAAACACACAGAACAAAGTCTTTTCTTTCCCCTCTAGATGGCTCAAAGGTGGTAGAATTGAGTTaGTGTAAATACCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: FLETHRTKSFLSPLDGSKVVELS*CKYLAH
Trigger: GTGAGCCAGGTATTTACAGCAACTCAATTCTACCAC...CTTTGAGCCATCTAGAGGGGAAAGAAAAGACTTTGTTCTGTGTGTTTCAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp TTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACAGAAGTAAGATGCTCTGGATaGTGTTATTGGCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: FHNILHIADMVNFLKHTEVRCSG*CYWPSL
Trigger: CAGGCTTGGCCAATAACACCATCCAGAGCATCTTAC...TTCTGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CCA 90 bp TCTTATTATGCAAATGAGCTTTGGCTGACACTATGTTGCCTGCTTTTTACTGTATACTGTACACATGGCTaGCAAAGAGAAGGGAACTTG +
Preference number: 4 (lower is better)
Translates to: SYYANELWLTLCCLLFTVYCTHG*QREGNL
Trigger: CAAGTTCCCTTCTCTTTGCCAGCCATGTGTACAGTA...TACAGTAAAAAGCAGGCAACATAGTGTCAGCCAAAGCTCATTTGCATAATAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp AAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTAAATGTGAGTTGCACTaGGAAATGTTCCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KDCSDFPRAKREDLIQKIKCELH*EMFPAE
Trigger: CTCAGCTGGGAACATTTCCCAGTGCAACTCACATTT...AATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR CAA 72 bp AAATGTGAGTTGCACTGGGAAATGTTCCCAGCTGAGTaGACAAAGCAATGCTCTGTAATGTTTTGGTTCTTA +
Preference number: 4 (lower is better)
Translates to: KCELHWEMFPAE*TKQCSVMFWFL
Trigger: TAAGAACCAAAACATTACAGAGCATTGCTTTGTCAACTCAGCTGGGAACATTTCCCAGTGCAACTCACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR CAA 72 bp ATTCAAAGTTCTCCAAAGCCCCTAAATCAATACTCATaGAGCTTATACGGACAGGCACAGAGCAGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: IQSSPKPLNQYS*SLYGQAQSSEK
Trigger: TTTTTCACTGCTCTGTGCCTGTCCGTATAAGCTCAATGAGTATTGATTTAGGGGCTTTGGAGAACTTTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTGTTCTTATAAAAAGGTaGCCAGAGGATGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFVLIKR*PEDGDG
Trigger: ACCATCTCCATCCTCTGGGCACCTTTTTATAAGAAC...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp TCTTATTATGCAAATGAGCTTTGGCTGACACTATGTTGCCTGCTTTTTACTGTAGTGAAAAATGTGAGTTaGACTGGGAAATGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SYYANELWLTLCCLLFTVVKNVS*TGKCSQ
Trigger: CTGGGAACATTTCCCAGTGCAACTCACATTTTTCAC...TACAGTAAAAAGCAGGCAACATAGTGTCAGCCAAAGCTCATTTGCATAATAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR GCA 90 bp CAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATGGGTATGCCTACAGCTaGAGAAAAATGTATAAAAGC +
Preference number: 4 (lower is better)
Translates to: QRLFRFSTGKEGRSYSEDGYAYS*RKMYKS
Trigger: GCTTTTATACATTTTTCTGCAGCTGTAGGCATACCC...ATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp TTTCTTGAAACACACAGAACAAAGTCTTTTCTTTCCCCTCTAGATGGCTCAAAGATGCCTGTTACCAAGTaGGTTACTTCTGCACTATTT +
Preference number: 4 (lower is better)
Translates to: FLETHRTKSFLSPLDGSKMPVTK*VTSALF
Trigger: AAATAGTGCAGAAGTAACCCACTTGGTAACAGGCAT...CTTTGAGCCATCTAGAGGGGAAAGAAAAGACTTTGTTCTGTGTGTTTCAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp CAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATCATCCTTCATATTGCTaGCATGGTGAATTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: QRLFRFSTGKEGRSYSEDHPSYC*HGEFLE
Trigger: TTCAAGAAATTCACCATGTCAGCAATATGAAGGATG...ATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CCA 90 bp AAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTAAGAAATCCAGATCGTaGTGTGAACATTCTAGTCCT +
Preference number: 4 (lower is better)
Translates to: KDCSDFPRAKREDLIQKIKKSRS*CEHSSP
Trigger: AGGACTAGAATGTTCACACCACGATCTGGATTTCTT...AATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp TCTTATTATGCAAATGAGCTTTGGCTGACACTATGTTGCCTGCTTTTTACTGTAGTCATTCCTTTGAAATaGAATTTGTTGCACATCCCC +
Preference number: 4 (lower is better)
Translates to: SYYANELWLTLCCLLFTVVIPLK*NLLHIP
Trigger: GGGGATGTGCAACAAATTCCATTTCAAAGGAATGAC...TACAGTAAAAAGCAGGCAACATAGTGTCAGCCAAAGCTCATTTGCATAATAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp CACGCCTTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACGTTTTCATATCACAATaGAAGTTCAAGTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: HAFHNILHIADMVNFLKHVFISQ*KFKFSV
Trigger: GACACTGAACTTGAACTTCCATTGTGATATGAAAAC...GTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAAGGCGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
3UTR CAA 72 bp CATAACATCCTTCATATTGCTGACATGGTGAATTTCTaGAAACACACAGAACAAAGTCTTTTCTTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: HNILHIADMVNF*KHTEQSLFFPL
Trigger: GAGGGGAAAGAAAAGACTTTGTTCTGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR TCA 90 bp AAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTCATCCTTCATATTGCTaGCATGGTGAATTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: KDCSDFPRAKREDLIQKIHPSYC*HGEFLE
Trigger: TTCAAGAAATTCACCATGTCAGCAATATGAAGGATG...AATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR GCA 90 bp AAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTAGGGTTAAGGGCATTTaGTTGGAATATTTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: KDCSDFPRAKREDLIQKIRVKGI*LEYLGV
Trigger: AACTCCTAAATATTCCAAGCAAATGCCCTTAACCCT...AATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp AGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTAACTTTTCTGCATGTTaGTGTGAAGACGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: RLFRFSTGKEGRSYSEDFNFSAC*CEDERR
Trigger: TCTTCTTTCGTCTTCACACCAACATGCAGAAAAGTT...AAAATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CCA 90 bp TTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACAGAAGTTGCTGTAAATACCTaGCTCACAAAGCCTAACATA +
Preference number: 4 (lower is better)
Translates to: FHNILHIADMVNFLKHTEVAVNT*LTKPNI
Trigger: TATGTTAGGCTTTGTGAGCCAGGTATTTACAGCAAC...TTCTGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR TCA 90 bp AATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTACACATATACTTTGCTCATCAGTaGAATGGGGTTAGAATTACA +
Preference number: 4 (lower is better)
Translates to: NPSSLTLLISEMGLELHIYFAHQ*NGVRIT
Trigger: TGTAATTCTAACCCCATTTCACTGATGAGCAAAGTA...TATGTGTAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601345.5
3UTR CAA 72 bp CTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTaGCTCATCAGTGAAATGGGGTTAGAATTACACATA +
Preference number: 4 (lower is better)
Translates to: LCTFDTNPSSLT*LISEMGLELHI
Trigger: TATGTGTAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR GCA 90 bp TTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACAGAATTAGGCTCGTTTTCCTaGTTCATTTTAAGATTTGGA +
Preference number: 4 (lower is better)
Translates to: FHNILHIADMVNFLKHTELGSFS*FILRFG
Trigger: TCCAAATCTTAAAATGAAGCAGGAAAACGAGCCTAA...TTCTGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS CCA 90 bp AGGTTCCAGGACCAGAGGGGCCTCAGCCAGCAACTTGCCCATCCCTaGAATGGAGACAAGGCCCACCACAGAAGGGCCTGGGTCACCAGA +
Preference number: 5 (lower is better)
Translates to: RFQDQRGLSQQLAHP*NGDKAHHRRAWVTR
Trigger: TCTGGTGACCCAGGCCCTTCTGTGGTGGGCCTTGTCTCCATTCCAGGGATGGGCAAGTTGCTGGCTGAGGCCCCTCTGGTCCTGGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000594076.5
ENST00000594294.5
ENST00000595839.5
CDS TCA 90 bp TTCTTGCTCAGGCCTCTGAGGACATCCTCTAGGCCATCCAGCAGGTaGCTGGCCACACAGTGCTGCTGTAAGCGGGGCAGGGTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: FLLRPLRTSSRPSSR*LATQCCCKRGRVSR
Trigger: CCTGGAGACCCTGCCCCGCTTACAGCAGCACTGTGTGGCCAGTCACCTGCTGGATGGCCTAGAGGATGTCCTCAGAGGCCTGAGCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000315576.8
ENST00000360222.8
ENST00000392962.3
ENST00000392965.7
ENST00000594076.5
ENST00000594294.5
ENST00000595208.5
ENST00000595839.5
ENST00000596991.6
ENST00000601345.5
CDS GCA 90 bp GGGTGCAACGGCAGATGGTGCTGGTGTCTCTGGTGCCTATTGTGCTaGAGCCTGTGGTGGCCCAGTGACCACATCCATTCTGGCCATGCT +
Preference number: 5 (lower is better)
Translates to: GCNGRWCWCLWCLLC*SLWWPSDHIHSGHA
Trigger: AGCATGGCCAGAATGGATGTGGTCACTGGGCCACCACAGGCTGCAGCACAATAGGCACCAGAGACACCAGCACCATCTGCCGTTGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315576.8
ENST00000594076.5
ENST00000594294.5
ENST00000595208.5
ENST00000595839.5
ENST00000596991.6
ENST00000601345.5
CDS GCA 90 bp CCAGGTAGCTGGTCCCAGAGTTTTCCCTTGGCCTTCACACCACGCTaGCTCTCTGGGCTGGCGAAACAGGTACATGCACACCTGTCTCAT +
Preference number: 5 (lower is better)
Translates to: PGSWSQSFPLAFTPR*LSGLAKQVHAHLSH
Trigger: ATGAGACAGGTGTGCATGTACCTGTTTCGCCAGCCCAGAGAGGCAGCGTGGTGTGAAGGCCAAGGGAAAACTCTGGGACCAGCTACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598500.1
CDS CCA 90 bp AGATGGTGCTGGTGTCTCTGGTGCCTATTGTGCTGCAGCCTGTGGTaGCCCAGTGACCACATCCATTCTGGCCATGCTCCCAGAAGACAC +
Preference number: 5 (lower is better)
Translates to: RWCWCLWCLLCCSLW*PSDHIHSGHAPRRH
Trigger: GTGTCTTCTGGGAGCATGGCCAGAATGGATGTGGTCACTGGGCCACCACAGGCTGCAGCACAATAGGCACCAGAGACACCAGCACCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315576.8
ENST00000594076.5
ENST00000594294.5
ENST00000595208.5
ENST00000595839.5
ENST00000596991.6
ENST00000601345.5
CDS TCA 90 bp GAGGTTTTGGGTGTCGTTGTTGCTCAGAAAGGCAGAGATCACATCTaGGAGCAGGATGGGGGAGCCGTCCTGCAGCAAGCCCTGGTGTGT +
Preference number: 5 (lower is better)
Translates to: EVLGVVVAQKGRDHI*EQDGGAVLQQALVC
Trigger: ACACACCAGGGCTTGCTGCAGGACGGCTCCCCCATCCTGCTCTCAGATGTGATCTCTGCCTTTCTGAGCAACAACGACACCCAAAACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000594076.5
ENST00000594294.5
ENST00000595839.5
ENST00000596991.6
ENST00000601345.5
CDS TCA 90 bp CCTTCCGCAGGACCCTTGCTCTTTTCTCATCTAGCCTCAGAAGAATaGACGCCTGACACAGTCGGGCGCCTCCAGCGCTCATTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: PSAGPLLFSHLASEE*TPDTVGRLQRSFCL
Trigger: CAAGCAGAATGAGCGCTGGAGGCGCCCGACTGTGTCAGGCGTTCATTCTTCTGAGGCTAGATGAGAAAAGAGCAAGGGTCCTGCGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360222.8
CDS-3UTR CAA 90 bp GCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCCAGGAGACACTCCTGTCTACTaGCTTCTGCACCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: APCVRFDQLPRGRGGGPGDTPVY*LLHLQG
Trigger: TCCCTGGAGGTGCAGAAGCAAGTAGACAGGAGTGTC...TCCTGGCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS CCA 90 bp TGTCGTTGTTGCTCAGAAAGGCAGAGATCACATCTGAGAGCAGGATaGGGGAGCCGTCCTGCAGCAAGCCCTGGTGTGTCTCATGCAGAA +
Preference number: 5 (lower is better)
Translates to: CRCCSERQRSHLRAG*GSRPAASPGVSHAE
Trigger: TTCTGCATGAGACACACCAGGGCTTGCTGCAGGACGGCTCCCCCATCCTGCTCTCAGATGTGATCTCTGCCTTTCTGAGCAACAACGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000594076.5
ENST00000594294.5
ENST00000595839.5
ENST00000596991.6
ENST00000601345.5
CDS CCA 90 bp CATTTAGGTAACAGGTGGCAAAGCCAGGATTTGGGCCCAGGTAGCTaGTCCCAGAGTTTTCCCTTGGCCTTCACACCACGCTGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: HLGNRWQSQDLGPGS*SQSFPLAFTPRCLS
Trigger: AGAGAGGCAGCGTGGTGTGAAGGCCAAGGGAAAACTCTGGGACCAGCTACCTGGGCCCAAATCCTGGCTTTGCCACCTGTTACCTAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598500.1
CDS-3UTR CAA 90 bp CACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCCAGGAAGACACTCCTGTCTACTaGCTTCTGCACCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: HLVSGLINCHEEEEVGQEDTPVY*LLHLQG
Trigger: TCCCTGGAGGTGCAGAAGCAAGTAGACAGGAGTGTC...TTCCTGGCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR CAA 90 bp GGCGCAGACAGGTCCAAGGAAGCCCCATATAAATCCCTTTTCTGGTTGGAGCCATGTCTCTGGTGCCTATaGTGCTGCAGCCTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: GADRSKEAPYKSLFWLEPCLWCL*CCSLWW
Trigger: CCACCACAGGCTGCAGCACAATAGGCACCAGAGACA...TGGCTCCAACCAGAAAAGGGATTTATATGGGGCTTCCTTGGACCTGTCTGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS-3UTR CAA 90 bp GCCTGCGGATTGCCTGAGCTCAGGAGATTAAGACCTGAGCCTGGGCAGCATAGTGTCCGGTTTGATCAATaGCCACGAGGAAGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: ACGLPELRRLRPEPGQHSVRFDQ*PRGRGG
Trigger: ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGAC...ACTATGCTGCCCAGGCTCAGGTCTTAATCTCCTGAGCTCAGGCAATCCGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp GCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCGTCCGGTTTGATCAATaGCCACGAGGAAGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: AQHLVSGLINCHEEEEVGVRFDQ*PRGRGG
Trigger: ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGAC...GCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS GCA 90 bp GGCCTTCACACCACGCTGCCTCTCTGGGCTGGCGAAACAGGTACATaGACACCTGTCTCATCTCAGACTCCAGGAACTGAACCTATACTT +
Preference number: 5 (lower is better)
Translates to: GLHTTLPLWAGETGT*TPVSSQTPGTEPIL
Trigger: AAGTATAGGTTCAGTTCCTGGAGTCTGAGATGAGACAGGTGTGCATGTACCTGTTTCGCCAGCCCAGAGAGGCAGCGTGGTGTGAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598500.1
CDS-3UTR CAA 90 bp GCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCCAGGAAGTGTTGCACACTCGTaGATGTCGTCACAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: APCVRFDQLPRGRGGGPGSVAHS*MSSQVS
Trigger: GGAGACTTGTGACGACATCAACGAGTGTGCAACACT...TCCTGGCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392962.3
CDS-3UTR CAA 90 bp CCTTTTCTGGTTGGAGCCAGCAGCGGGAAGGTGTTCCATAAAGGTGAGGCCTGGACATTCGTCCACATCTaGACACGTGTTCTCGCTCTC +
Preference number: 5 (lower is better)
Translates to: PFLVGASSGKVFHKGEAWTFVHI*TRVLAL
Trigger: GAGAGCGAGAACACGTGTCAAGATGTGGACGAATGT...CCAGGCCTCACCTTTATGGAACACCTTCCCGCTGCTGGCTCCAACCAGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS TCA 90 bp AGGACCCTTGCTCTTTTCTCATCTAGCCTCAGAAGAATGAACGCCTaGCACAGTCGGGCGCCTCCAGCGCTCATTCTGCTTGGTTTGTGT +
Preference number: 5 (lower is better)
Translates to: RTLALFSSSLRRMNA*HSRAPPALILLGLC
Trigger: ACACAAACCAAGCAGAATGAGCGCTGGAGGCGCCCGACTGTGTCAGGCGTTCATTCTTCTGAGGCTAGATGAGAAAAGAGCAAGGGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360222.8
CDS-3UTR CAA 90 bp GCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCAAGTTCAACAGCCCATaGGAAAGGTTCTTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: AQHLVSGLINCHEEEEVGKFNSP*ERFLLR
Trigger: CCTGAGCAAGAACCTTTCCAATGGGCTGTTGAACTT...GCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR CAA 90 bp CTTTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGGCCTCAGCCAGCAACTaGCCCATCCCTGGAATGGAG +
Preference number: 5 (lower is better)
Translates to: LSPLDGSKIVQIFHGQRGASASN*PIPGME
Trigger: CTCCATTCCAGGGATGGGCAAGTTGCTGGCTGAGGC...CCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000392965.7
CDS-3UTR CAA 90 bp TGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGTCCGGTTTGATCAATaGCCACGAGGAAGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: WSTAPCVRFDQLPRGRGGVRFDQ*PRGRGG
Trigger: ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGAC...ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR CAA 90 bp CACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTGGGCCAGGAACACCTTGTGTCCGGTTaGATCAATTGCCACGAGGAA +
Preference number: 5 (lower is better)
Translates to: HLVSGLINCHEEEEVGQEHLVSG*INCHEE
Trigger: TTCCTCGTGGCAATTGATCAAACCGGACACAAGGTG...TTCCTGGCCCACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR CAA 90 bp TGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGGTACATTCGTCCACATCTaGACACGTGTTCTCGCTCTC +
Preference number: 5 (lower is better)
Translates to: WSTAPCVRFDQLPRGRGGTFVHI*TRVLAL
Trigger: GAGAGCGAGAACACGTGTCAAGATGTGGACGAATGT...ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR CAA 90 bp GATGGAGCACAGCACCTTGTGTCCGGTTTGATCAATTGCCACGAGGAAGAGGAGCACCTTGTGTCCGGTTaGATCAATTGCCACGAGGAA +
Preference number: 5 (lower is better)
Translates to: DGAQHLVSGLINCHEEEEHLVSG*INCHEE
Trigger: TTCCTCGTGGCAATTGATCAAACCGGACACAAGGTG...CTCCTCTTCCTCGTGGCAATTGATCAAACCGGACACAAGGTGCTGTGCTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392962.3
ENST00000595208.5
CDS-3UTR CAA 90 bp TGCCGGCATTCACCCGTGGAAGCTTCCAGCTTGCTTGTCTATGTCTGCAGCTCGCCTTTGAAATGGAATTaGTTGCACATCCCCGATCTG +
Preference number: 5 (lower is better)
Translates to: CRHSPVEASSLLVYVCSSPLKWN*LHIPDL
Trigger: CAGATCGGGGATGTGCAACAAATTCCATTTCAAAGG...CGAGCTGCAGACATAGACAAGCAAGCTGGAAGCTTCCACGGGTGAATGCCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp TCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGTGGGGAGCTGAGGTTTaGGGTGTCGTTGTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: SPLDGSKIVQIFHGQRGKWGAEV*GVVVAQ
Trigger: CTGAGCAACAACGACACCCAAAACCTCAGCTCCCCA...CTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp TGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCATCCCAGGCTGGAGTGCATaGGCGCGATCTCGGCTCACT +
Preference number: 5 (lower is better)
Translates to: WPRLCTFDTNPSSLTLLIPGWSA*ARSRLT
Trigger: AGTGAGCCGAGATCGCGCCAATGCACTCCAGCCTGG...GATGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CAA 90 bp TTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGACACTCCTGTCTACTaGCTTCTGCACCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: FPSRWLKDCSDFPRAKREDTPVY*LLHLQG
Trigger: TCCCTGGAGGTGCAGAAGCAAGTAGACAGGAGTGTC...TTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp CTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTAGCCTCAGCCAGCAACTaGCCCATCCCTGGAATGGAG +
Preference number: 5 (lower is better)
Translates to: LDGSKIVQIFHGQRGKILASASN*PIPGME
Trigger: CTCCATTCCAGGGATGGGCAAGTTGCTGGCTGAGGC...TAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000392965.7
CDS-3UTR CAA 90 bp GCCTGCGGATTGCCTGAGCTCAGGAGATTAAGACCTGAGCCTGGGCAGCATAGTCCATCAAGCCACTTTTaGTGTTTCTTTCCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: ACGLPELRRLRPEPGQHSPSSHF*CFFPLS
Trigger: AGAAAGAGGAAAGAAACACAAAAAGTGGCTTGATGG...ACTATGCTGCCCAGGCTCAGGTCTTAATCTCCTGAGCTCAGGCAATCCGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCATGGGGAGCTGAGGTTTaGGGTGTCGTTGTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSWGAEV*GVVVAQ
Trigger: CTGAGCAACAACGACACCCAAAACCTCAGCTCCCCA...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CAA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCTGTCTCTGGTGCCTATaGTGCTGCAGCCTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFCLWCL*CCSLWW
Trigger: CCACCACAGGCTGCAGCACAATAGGCACCAGAGACA...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CAA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCAGTGTTGCACACTCGTaGATGTCGTCACAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKISVAHS*MSSQVS
Trigger: GGAGACTTGTGACGACATCAACGAGTGTGCAACACT...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp TTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAACATTCGTCCACATCTaGACACGTGTTCTCGCTCTC +
Preference number: 5 (lower is better)
Translates to: FPSRWLKDCSDFPRAKRETFVHI*TRVLAL
Trigger: GAGAGCGAGAACACGTGTCAAGATGTGGACGAATGT...TTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp TGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCATCGACACTCCTGTCTACTaGCTTCTGCACCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: WPRLCTFDTNPSSLTLLIDTPVY*LLHLQG
Trigger: TCCCTGGAGGTGCAGAAGCAAGTAGACAGGAGTGTC...GATGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CAA 90 bp TTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAAGGTTTTGGGTGTCGTaGTTGCTCAGAAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: FPSRWLKDCSDFPRAKRERFWVS*LLRKAE
Trigger: CTCTGCCTTTCTGAGCAACAACGACACCCAAAACCT...TTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp CTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATGGGGAGCTGAGGTTTaGGGTGTCGTTGTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: LDGSKIVQIFHGQRGKILWGAEV*GVVVAQ
Trigger: CTGAGCAACAACGACACCCAAAACCTCAGCTCCCCA...TAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp CCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCCACCTTGTGTCCGGTTaGATCAATTGCCACGAGGAA +
Preference number: 5 (lower is better)
Translates to: PLDGSKIVQIFHGQRGKIHLVSG*INCHEE
Trigger: TTCCTCGTGGCAATTGATCAAACCGGACACAAGGTG...GATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp TCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGCAAGATTTCACCATGTaGACCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SPLDGSKIVQIFHGQRGKQDFTM*TRLVLN
Trigger: GTTCAAGACCAGCCTGGTCAACATGGTGAAATCTTG...CTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCAGCTGGCATTACAAGCTaGAACCACTGTTCCTGGCGT +
Preference number: 5 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSAGITS*NHCSWR
Trigger: ACGCCAGGAACAGTGGTTCAAGCTTGTAATGCCAGC...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CAA 90 bp ACTATGTTGCCTGCTTTTTACTGTACACATGGCTGGCAAAGAGAAGGGAACTTGACATTCGTCCACATCTaGACACGTGTTCTCGCTCTC +
Preference number: 5 (lower is better)
Translates to: TMLPAFYCTHGWQREGNLTFVHI*TRVLAL
Trigger: GAGAGCGAGAACACGTGTCAAGATGTGGACGAATGT...CAAGTTCCCTTCTCTTTGCCAGCCATGTGTACAGTAAAAAGCAGGCAACATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp TTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAAAGTTCAACAGCCCATaGGAAAGGTTCTTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: FPSRWLKDCSDFPRAKREKFNSP*ERFLLR
Trigger: CCTGAGCAAGAACCTTTCCAATGGGCTGTTGAACTT...TTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp AGAATTTCTGTTCAAGGAAAGCAGATAACAGACAGGGTTAAGGGCATTTGCTTGGACACTCCTGTCTACTaGCTTCTGCACCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: RISVQGKQITDRVKGICLDTPVY*LLHLQG
Trigger: TCCCTGGAGGTGCAGAAGCAAGTAGACAGGAGTGTC...CAAGCAAATGCCCTTAACCCTGTCTGTTATCTGCTTTCCTTGAACAGAAATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp GCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGACACTCCTGTCTACTaGCTTCTGCACCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: AQRLFRFSTGKEGRSYSEDTPVY*LLHLQG
Trigger: TCCCTGGAGGTGCAGAAGCAAGTAGACAGGAGTGTC...TTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp TTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAATTTTGGGTGTCGTTGTaGCTCAGAAAGGCAGAGATC +
Preference number: 5 (lower is better)
Translates to: FPSRWLKDCSDFPRAKREFWVSL*LRKAEI
Trigger: GATCTCTGCCTTTCTGAGCAACAACGACACCCAAAA...TTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCTTAACCGTGCTGGGTTaGGAGGTGTCAGCCTTAGCA +
Preference number: 5 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFLTVLG*EVSALA
Trigger: TGCTAAGGCTGACACCTCCAAACCCAGCACGGTTAA...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp CTTTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAGTTTGATGAGCACATaGCAGGGCATGGAAGATTTC +
Preference number: 5 (lower is better)
Translates to: LSPLDGSKIVQIFHGQRGSLMST*QGMEDF
Trigger: GAAATCTTCCATGCCCTGCAATGTGCTCATCAAACT...CCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp TTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACAGAAGCCTCAGCCAGCAACTaGCCCATCCCTGGGTCACCA +
Preference number: 5 (lower is better)
Translates to: FHNILHIADMVNFLKHTEASASN*PIPGSP
Trigger: TGGTGACCCAGGGATGGGCAAGTTGCTGGCTGAGGC...TTCTGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596991.6
CDS-3UTR CAA 90 bp AATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTACACATAGCCTCAGCCAGCAACTaGCCCATCCCTGGGTCACCA +
Preference number: 5 (lower is better)
Translates to: NPSSLTLLISEMGLELHIASASN*PIPGSP
Trigger: TGGTGACCCAGGGATGGGCAAGTTGCTGGCTGAGGC...TATGTGTAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CAA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGTGTTGCACACTCGTaGATGTCGTCACAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFSVAHS*MSSQVS
Trigger: GGAGACTTGTGACGACATCAACGAGTGTGCAACACT...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCAAAGTTCAACAGCCCATaGGAAAGGTTCTTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSKFNSP*ERFLLR
Trigger: CCTGAGCAAGAACCTTTCCAATGGGCTGTTGAACTT...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CAA 90 bp CTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTAAGGTTTTGGGTGTCGTaGTTGCTCAGAAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LDGSKIVQIFHGQRGKILRFWVS*LLRKAE
Trigger: CTCTGCCTTTCTGAGCAACAACGACACCCAAAACCT...TAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp TCTTATTATGCAAATGAGCTTTGGCTGACACTATGTTGCCTGCTTTTTACTGTATGTCTCTGGTGCCTATaGTGCTGCAGCCTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: SYYANELWLTLCCLLFTVCLWCL*CCSLWW
Trigger: CCACCACAGGCTGCAGCACAATAGGCACCAGAGACA...TACAGTAAAAAGCAGGCAACATAGTGTCAGCCAAAGCTCATTTGCATAATAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp ATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGATCCCCCACCTTGTGTCCGGTTaGATCAATTGCCACGAGGAA +
Preference number: 5 (lower is better)
Translates to: MNYPMPLRHRIIWLQVIPHLVSG*INCHEE
Trigger: TTCCTCGTGGCAATTGATCAAACCGGACACAAGGTG...GGGGATCACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CAA 90 bp GCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAATTAACCGTGCTGGGTTaGGAGGTGTCAGCCTTAGCA +
Preference number: 5 (lower is better)
Translates to: AQRLFRFSTGKEGRSYSELTVLG*EVSALA
Trigger: TGCTAAGGCTGACACCTCCAAACCCAGCACGGTTAA...TTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp AAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTCCTAGTGGTGGAGGCTaGGCAAGGATGCCTGTTACC +
Preference number: 5 (lower is better)
Translates to: KDCSDFPRAKREDLIQKIPSGGG*ARMPVT
Trigger: GGTAACAGGCATCCTTGCCAAGCCTCCACCACTAGG...AATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp AATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTACACATACCTGGCGTGCTGGGTTaGGAGGTGTCAGCCTTAGCA +
Preference number: 5 (lower is better)
Translates to: NPSSLTLLISEMGLELHIPGVLG*EVSALA
Trigger: TGCTAAGGCTGACACCTCCAAACCCAGCACGCCAGG...TATGTGTAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS CCA 90 bp ATCAATGTCATGAATTATCCCATGCCATTGAGGCATAGGATAATATaGCTTCAAGTGATCCCCAAGTTGTCCCGGGCTCAAGTGATCTTC +
Preference number: 5 (lower is better)
Translates to: INVMNYPMPLRHRII*LQVIPKLSRAQVIF
Trigger: GAAGATCACTTGAGCCCGGGACAACTTGGGGATCACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCATGACATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CAA 90 bp TCTATATCAAGCAAAGGGCACGCAGAATCCCATGCACCCATCATGTATGTAATAAAGTTCAACAGCCCATaGGAAAGGTTCTTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: SISSKGHAESHAPIMYVIKFNSP*ERFLLR
Trigger: CCTGAGCAAGAACCTTTCCAATGGGCTGTTGAACTT...TATTACATACATGATGGGTGCATGGGATTCTGCGTGCCCTTTGCTTGATATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp GATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAAGTTCAACAGCCCATaGGAAAGGTTCTTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: DGSKIVQIFHGQRGKILFKFNSP*ERFLLR
Trigger: CCTGAGCAAGAACCTTTCCAATGGGCTGTTGAACTT...GAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp AAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTGGGGAGCTGAGGTTTaGGGTGTCGTTGTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: KDCSDFPRAKREDLIQKIWGAEV*GVVVAQ
Trigger: CTGAGCAACAACGACACCCAAAACCTCAGCTCCCCA...AATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp AATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTACACATATGTCTCTGGTGCCTATaGTGCTGCAGCCTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: NPSSLTLLISEMGLELHICLWCL*CCSLWW
Trigger: CCACCACAGGCTGCAGCACAATAGGCACCAGAGACA...TATGTGTAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CAA 90 bp TTTCTTGAAACACACAGAACAAAGTCTTTTCTTTCCCCTCTAGATGGCTCAAAGGTCCGGTTTGATCAATaGCCACGAGGAAGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: FLETHRTKSFLSPLDGSKVRFDQ*PRGRGG
Trigger: ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGAC...CTTTGAGCCATCTAGAGGGGAAAGAAAAGACTTTGTTCTGTGTGTTTCAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp TTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAAATTTCCTGATCCCTTaGGACCATTTCCCATATTGC +
Preference number: 5 (lower is better)
Translates to: FPSRWLKDCSDFPRAKRENFLIP*DHFPYC
Trigger: GCAATATGGGAAATGGTCCAAAGGGATCAGGAAATT...TTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp TTTCTTGAAACACACAGAACAAAGTCTTTTCTTTCCCCTCTAGATGGCTCAAAGTTAACCGTGCTGGGTTaGGAGGTGTCAGCCTTAGCA +
Preference number: 5 (lower is better)
Translates to: FLETHRTKSFLSPLDGSKLTVLG*EVSALA
Trigger: TGCTAAGGCTGACACCTCCAAACCCAGCACGGTTAA...CTTTGAGCCATCTAGAGGGGAAAGAAAAGACTTTGTTCTGTGTGTTTCAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp TTTCTTGAAACACACAGAACAAAGTCTTTTCTTTCCCCTCTAGATGGCTCAAAGAGGATCAGGAGTGACTaGAGGGTACTGACTGGCAGA +
Preference number: 5 (lower is better)
Translates to: FLETHRTKSFLSPLDGSKRIRSD*RVLTGR
Trigger: TCTGCCAGTCAGTACCCTCAAGTCACTCCTGATCCT...CTTTGAGCCATCTAGAGGGGAAAGAAAAGACTTTGTTCTGTGTGTTTCAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp TTCCCCTCTAGATGGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAACCACAGTGGTAGAATaGAGTTGCTGTAAATACCTG +
Preference number: 5 (lower is better)
Translates to: FPSRWLKDCSDFPRAKRETTVVE*SCCKYL
Trigger: CAGGTATTTACAGCAACTCAATTCTACCACTGTGGT...TTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCCATCTAGAGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp CAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATAGTGTTGCACACTCGTaGATGTCGTCACAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: QRLFRFSTGKEGRSYSEDSVAHS*MSSQVS
Trigger: GGAGACTTGTGACGACATCAACGAGTGTGCAACACT...ATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp AATGTCATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGACATTCGTCCACATCTaGACACGTGTTCTCGCTCTC +
Preference number: 5 (lower is better)
Translates to: NVMNYPMPLRHRIIWLQVTFVHI*TRVLAL
Trigger: GAGAGCGAGAACACGTGTCAAGATGTGGACGAATGT...CACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCATGACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CAA 90 bp GACACAAATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTAGTCCGGTTTGATCAATaGCCACGAGGAAGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: DTNPSSLTLLISEMGLELVRFDQ*PRGRGG
Trigger: ACCTCCTCTTCCTCGTGGCAATTGATCAAACCGGAC...TAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATTTGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CAA 90 bp TTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACAGAAGAACAGCTCTTTCTCTaGCATGGGAGAGGGGCGTCT +
Preference number: 5 (lower is better)
Translates to: FHNILHIADMVNFLKHTEEQLFL*HGRGAS
Trigger: AGACGCCCCTCTCCCATGCAAGAGAAAGAGCTGTTC...TTCTGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp CCTGGCCGAGACTCTGTACATTTGACACAAATCCAAGTAGTCTTACTTTGCTCACGAGACTCTGTACATTaGACACAAATCCAAGTAGTC +
Preference number: 5 (lower is better)
Translates to: PGRDSVHLTQIQVVLLCSRDSVH*TQIQVV
Trigger: GACTACTTGGATTTGTGTCAAATGTACAGAGTCTCG...TGAGCAAAGTAAGACTACTTGGATTTGTGTCAAATGTACAGAGTCTCGGCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CAA 90 bp GACACAAATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTAAGTGTTGCACACTCGTaGATGTCGTCACAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: DTNPSSLTLLISEMGLELSVAHS*MSSQVS
Trigger: GGAGACTTGTGACGACATCAACGAGTGTGCAACACT...TAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATTTGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CAA 90 bp AAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTACATTCGTCCACATCTaGACACGTGTTCTCGCTCTC +
Preference number: 5 (lower is better)
Translates to: KDCSDFPRAKREDLIQKITFVHI*TRVLAL
Trigger: GAGAGCGAGAACACGTGTCAAGATGTGGACGAATGT...AATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp CAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTTTGGGTGTCGTTGTaGCTCAGAAAGGCAGAGATC +
Preference number: 5 (lower is better)
Translates to: QRLFRFSTGKEGRSYSEDFWVSL*LRKAEI
Trigger: GATCTCTGCCTTTCTGAGCAACAACGACACCCAAAA...ATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp GCCTTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACATTTTGGGTGTCGTTGTaGCTCAGAAAGGCAGAGATC +
Preference number: 5 (lower is better)
Translates to: AFHNILHIADMVNFLKHTFWVSL*LRKAEI
Trigger: GATCTCTGCCTTTCTGAGCAACAACGACACCCAAAA...TGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CAA 90 bp GACACAAATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTAAGGTTTTGGGTGTCGTaGTTGCTCAGAAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: DTNPSSLTLLISEMGLELRFWVS*LLRKAE
Trigger: CTCTGCCTTTCTGAGCAACAACGACACCCAAAACCT...TAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATTTGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CAA 90 bp AAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTCACCTTGTGTCCGGTTaGATCAATTGCCACGAGGAA +
Preference number: 5 (lower is better)
Translates to: KDCSDFPRAKREDLIQKIHLVSG*INCHEE
Trigger: TTCCTCGTGGCAATTGATCAAACCGGACACAAGGTG...AATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000596991.6
CDS-3UTR CAA 90 bp ATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGATCCCCAATTTCCTGATCCCTTaGGACCATTTCCCATATTGC +
Preference number: 5 (lower is better)
Translates to: MNYPMPLRHRIIWLQVIPNFLIP*DHFPYC
Trigger: GCAATATGGGAAATGGTCCAAAGGGATCAGGAAATT...GGGGATCACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CAA 90 bp AAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTGCAGTGAGCAGTGTTaGTGCCATTGTACTCCAGCA +
Preference number: 5 (lower is better)
Translates to: KDCSDFPRAKREDLIQKICSEQC*CHCTPA
Trigger: TGCTGGAGTACAATGGCACAAACACTGCTCACTGCA...AATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp GCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAATGTTCCCAGCTGAGTaGACAAAGCAATGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: AQRLFRFSTGKEGRSYSEMFPAE*TKQCSV
Trigger: TACAGAGCATTGCTTTGTCAACTCAGCTGGGAACAT...TTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp GTTGTCGGTATGAAAGTCCTCTTAGGCTCGTTTTCCTGCTTCATTTTAAGATTTAGTAGAGGTACCAGGTaGCCAACAATGGTTACTTGG +
Preference number: 5 (lower is better)
Translates to: VVGMKVLLGSFSCFILRFSRGTR*PTMVTW
Trigger: CCAAGTAACCATTGTTGGCAACCTGGTACCTCTACT...AAATCTTAAAATGAAGCAGGAAAACGAGCCTAAGAGGACTTTCATACCGACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp AGAATTTCTGTTCAAGGAAAGCAGATAACAGACAGGGTTAAGGGCATTTGCTTGTCTTTAAGAAAACATTaGGCGACCCCTGCTCTAGGT +
Preference number: 5 (lower is better)
Translates to: RISVQGKQITDRVKGICLSLRKH*ATPALG
Trigger: ACCTAGAGCAGGGGTCGCCAAATGTTTTCTTAAAGA...CAAGCAAATGCCCTTAACCCTGTCTGTTATCTGCTTTCCTTGAACAGAAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp TTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACAGAAAGGTTTTGGGTGTCGTaGTTGCTCAGAAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: FHNILHIADMVNFLKHTERFWVS*LLRKAE
Trigger: CTCTGCCTTTCTGAGCAACAACGACACCCAAAACCT...TTCTGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CAA 90 bp TTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACAGAACACCTTGTGTCCGGTTaGATCAATTGCCACGAGGAA +
Preference number: 5 (lower is better)
Translates to: FHNILHIADMVNFLKHTEHLVSG*INCHEE
Trigger: TTCCTCGTGGCAATTGATCAAACCGGACACAAGGTG...TTCTGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CAA 90 bp CACGCCTTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACTTGAAATGGAATTTGTaGCACATCCCCGATCTGAGA +
Preference number: 5 (lower is better)
Translates to: HAFHNILHIADMVNFLKHLKWNL*HIPDLR
Trigger: TCTCAGATCGGGGATGTGCAACAAATTCCATTTCAA...GTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAAGGCGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp GGCTCAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGATTGCAGGTCATTCCTTaGAAATGGAATTTGTTGCAC +
Preference number: 5 (lower is better)
Translates to: GSKIVQIFHGQRGKILFRLQVIP*KWNLLH
Trigger: GTGCAACAAATTCCATTTCAAAGGAATGACCTGCAA...TCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp AGAATTTCTGTTCAAGGAAAGCAGATAACAGACAGGGTTAAGGGCATTTGCTTGAGTGAAAAATGTGAGTaGCACTGGGAAATGTTCCCA +
Preference number: 5 (lower is better)
Translates to: RISVQGKQITDRVKGICLSEKCE*HWEMFP
Trigger: TGGGAACATTTCCCAGTGCAACTCACATTTTTCACT...CAAGCAAATGCCCTTAACCCTGTCTGTTATCTGCTTTCCTTGAACAGAAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp AATGTCATGAATTATCCCATGCCATTGAGGCATAGGATAATATGGCTTCAAGTGCCAAGTAGTCTTACTTaGCTCATCAGTGAAATGGGG +
Preference number: 5 (lower is better)
Translates to: NVMNYPMPLRHRIIWLQVPSSLT*LISEMG
Trigger: CCCCATTTCACTGATGAGCAAAGTAAGACTACTTGG...CACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCATGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CAA 90 bp AATCCAAGTAGTCTTACTTTGCTCATCAGTGAAATGGGGTTAGAATTACACATATTTTGGGTGTCGTTGTaGCTCAGAAAGGCAGAGATC +
Preference number: 5 (lower is better)
Translates to: NPSSLTLLISEMGLELHIFWVSL*LRKAEI
Trigger: GATCTCTGCCTTTCTGAGCAACAACGACACCCAAAA...TATGTGTAATTCTAACCCCATTTCACTGATGAGCAAAGTAAGACTACTTGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601345.5
CDS-3UTR CAA 90 bp GCCTTCCATAACATCCTTCATATTGCTGACATGGTGAATTTCTTGAAACACACAAATTTCCTGATCCCTTaGGACCATTTCCCATATTGC +
Preference number: 5 (lower is better)
Translates to: AFHNILHIADMVNFLKHTNFLIP*DHFPYC
Trigger: GCAATATGGGAAATGGTCCAAAGGGATCAGGAAATT...TGTGTGTTTCAAGAAATTCACCATGTCAGCAATATGAAGGATGTTATGGAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000596991.6
CDS-3UTR CAA 90 bp CAAAGATTGTTCAGATTTTCCACGGGCAAAGAGGGAAGATCTTATTCAGAAGATTTGGCTGACACTATGTaGCCTGCTTTTTACTGTACA +
Preference number: 5 (lower is better)
Translates to: QRLFRFSTGKEGRSYSEDLADTM*PAFYCT
Trigger: TGTACAGTAAAAAGCAGGCAACATAGTGTCAGCCAA...ATCTTCTGAATAAGATCTTCCCTCTTTGCCCGTGGAAAATCTGAACAATCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp AGAATTTCTGTTCAAGGAAAGCAGATAACAGACAGGGTTAAGGGCATTTGCTTGTTAGAATCTACCAGGTaGAGTTGCTTTTGGAACTTA +
Preference number: 5 (lower is better)
Translates to: RISVQGKQITDRVKGICLLESTR*SCFWNL
Trigger: TAAGTTCCAAAAGCAACTCAACCTGGTAGATTCTAA...CAAGCAAATGCCCTTAACCCTGTCTGTTATCTGCTTTCCTTGAACAGAAATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS-3UTR CAA 90 bp TTTCTTGAAACACACAGAACAAAGTCTTTTCTTTCCCCTCTAGATGGCTCAAAGGTTAAGGGCATTTGCTaGGAATATTTAGGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: FLETHRTKSFLSPLDGSKVKGIC*EYLGVL
Trigger: CAAAACTCCTAAATATTCCAAGCAAATGCCCTTAAC...CTTTGAGCCATCTAGAGGGGAAAGAAAAGACTTTGTTCTGTGTGTTTCAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315576.8
CDS CCA 72 bp ACTGGCGGTGCAGCTGGGCTTGGTGGCAGACGTCTGTaGTCCCAGCTGCTACTACTCAGGAGGCTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: TGGAAGLGGRRL*SQLLLLRRLRQ
Trigger: CTGCCTCAGCCTCCTGAGTAGTAGCAGCTGGGACCACAGACGTCTGCCACCAAGCCCAGCTGCACCGCCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315576.8
ENST00000360222.8
CDS CCA 72 bp CTCCAGGTGGGGTTGTTGGCCAGTGGCAGGTTCGACTaGGGACAGTGGCCCTGCCTTCAAATCTCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: LQVGLLASGRFD*GQWPCLQISLL
Trigger: GAGGAGGGAGATTTGAAGGCAGGGCCACTGTCCCCAGTCGAACCTGCCACTGGCCAACAACCCCACCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599423.5
CDS CAA 72 bp GATTTGGGCCCAGGTAGCTGGTCCCAGAGTTTTCCCTaGGCCTTCACACCACGCTGCCTCTCTGGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: DLGPGSWSQSFP*AFTPRCLSGLA
Trigger: CGCCAGCCCAGAGAGGCAGCGTGGTGTGAAGGCCAAGGGAAAACTCTGGGACCAGCTACCTGGGCCCAAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598500.1
CDS CCA 72 bp AAAGAGGTCAGGGCTCCACGAGGCATCTTCTCCAGGTaGGGTTGTTGGCCAGTGGCAGGTTCGACTGGGGAC +
Preference number: 6 (lower is better)
Translates to: KEVRAPRGIFSR*GCWPVAGSTGD
Trigger: GTCCCCAGTCGAACCTGCCACTGGCCAACAACCCCACCTGGAGAAGATGCCTCGTGGAGCCCTGACCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599423.5
CDS CCA 72 bp ATTTGGGCCCAGGTAGCTGGTCCCAGAGTTTTCCCTTaGCCTTCACACCACGCTGCCTCTCTGGGCTGGCGA +
Preference number: 6 (lower is better)
Translates to: IWAQVAGPRVFP*PSHHAASLGWR
Trigger: TCGCCAGCCCAGAGAGGCAGCGTGGTGTGAAGGCCAAGGGAAAACTCTGGGACCAGCTACCTGGGCCCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598500.1
CDS CCA 72 bp GAGAGCAGGATGGGGGAGCCGTCCTGCAGCAAGCCCTaGTGTGTCTCATGCAGAAGCATCTGCTTCTCAGGT +
Preference number: 6 (lower is better)
Translates to: ESRMGEPSCSKP*CVSCRSICFSG
Trigger: ACCTGAGAAGCAGATGCTTCTGCATGAGACACACCAGGGCTTGCTGCAGGACGGCTCCCCCATCCTGCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000594076.5
ENST00000594294.5
ENST00000595839.5
ENST00000596991.6
ENST00000601345.5
CDS CAA 72 bp TGCAACGGCAGATGGTGCTGGTGTCTCTGGTGCCTATaGTGCTGCAGCCTGTGGTGGCCCAGTGACCACATC +
Preference number: 6 (lower is better)
Translates to: CNGRWCWCLWCL*CCSLWWPSDHI
Trigger: GATGTGGTCACTGGGCCACCACAGGCTGCAGCACAATAGGCACCAGAGACACCAGCACCATCTGCCGTTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315576.8
ENST00000594076.5
ENST00000594294.5
ENST00000595208.5
ENST00000595839.5
ENST00000596991.6
ENST00000601345.5
CDS GCA 72 bp GAGATCACATCTGAGAGCAGGATGGGGGAGCCGTCCTaGAGCAAGCCCTGGTGTGTCTCATGCAGAAGCATC +
Preference number: 6 (lower is better)
Translates to: EITSESRMGEPS*SKPWCVSCRSI
Trigger: GATGCTTCTGCATGAGACACACCAGGGCTTGCTGCAGGACGGCTCCCCCATCCTGCTCTCAGATGTGATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000594076.5
ENST00000594294.5
ENST00000595839.5
ENST00000596991.6
ENST00000601345.5
CDS GCA 72 bp GGCAGATGGTGCTGGTGTCTCTGGTGCCTATTGTGCTaGAGCCTGTGGTGGCCCAGTGACCACATCCATTCT +
Preference number: 6 (lower is better)
Translates to: GRWCWCLWCLLC*SLWWPSDHIHS
Trigger: AGAATGGATGTGGTCACTGGGCCACCACAGGCTGCAGCACAATAGGCACCAGAGACACCAGCACCATCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315576.8
ENST00000594076.5
ENST00000594294.5
ENST00000595208.5
ENST00000595839.5
ENST00000596991.6
ENST00000601345.5
CDS CCA 72 bp TGCTGGTGTCTCTGGTGCCTATTGTGCTGCAGCCTGTaGTGGCCCAGTGACCACATCCATTCTGGCCATGCT +
Preference number: 6 (lower is better)
Translates to: CWCLWCLLCCSL*WPSDHIHSGHA
Trigger: AGCATGGCCAGAATGGATGTGGTCACTGGGCCACCACAGGCTGCAGCACAATAGGCACCAGAGACACCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315576.8
ENST00000594076.5
ENST00000594294.5
ENST00000595208.5
ENST00000595839.5
ENST00000596991.6
ENST00000601345.5
CDS CCA 72 bp AACAGGTGGCAAAGCCAGGATTTGGGCCCAGGTAGCTaGTCCCAGAGTTTTCCCTTGGCCTTCACACCACGC +
Preference number: 6 (lower is better)
Translates to: NRWQSQDLGPGS*SQSFPLAFTPR
Trigger: GCGTGGTGTGAAGGCCAAGGGAAAACTCTGGGACCAGCTACCTGGGCCCAAATCCTGGCTTTGCCACCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598500.1
CDS TCA 72 bp GGACCCTTGCTCTTTTCTCATCTAGCCTCAGAAGAATaGACGCCTGACACAGTCGGGCGCCTCCAGCGCTCA +
Preference number: 6 (lower is better)
Translates to: GPLLFSHLASEE*TPDTVGRLQRS
Trigger: TGAGCGCTGGAGGCGCCCGACTGTGTCAGGCGTTCATTCTTCTGAGGCTAGATGAGAAAAGAGCAAGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360222.8
CDS GCA 72 bp GCCCACCACAGAAGGGCCTGGGTCACCAGATTTCTGTaGCTGATTCCAGTCGAGCTGCATCACTGCCTGATT +
Preference number: 6 (lower is better)
Translates to: AHHRRAWVTRFL*LIPVELHHCLI
Trigger: AATCAGGCAGTGATGCAGCTCGACTGGAATCAGGCACAGAAATCTGGTGACCCAGGCCCTTCTGTGGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000594076.5
ENST00000594294.5
ENST00000595839.5
CDS GCA 72 bp AGCACGGGATCCTCCTCCTGGGTCACCAGATTTCTGTaGCTGATTCCAGTCGAGCTGCATCACTGCCTGATT +
Preference number: 6 (lower is better)
Translates to: STGSSSWVTRFL*LIPVELHHCLI
Trigger: AATCAGGCAGTGATGCAGCTCGACTGGAATCAGGCACAGAAATCTGGTGACCCAGGAGGAGGATCCCGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392962.3
CDS GCA 72 bp ACCACGCTGCCTCTCTGGGCTGGCGAAACAGGTACATaGACACCTGTCTCATCTCAGACTCCAGGAACTGAA +
Preference number: 6 (lower is better)
Translates to: TTLPLWAGETGT*TPVSSQTPGTE
Trigger: TTCAGTTCCTGGAGTCTGAGATGAGACAGGTGTGCATGTACCTGTTTCGCCAGCCCAGAGAGGCAGCGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598500.1
CDS TCA 72 bp GCTCTTTTCTCATCTAGCCTCAGAAGAATGAACGCCTaGCACAGTCGGGCGCCTCCAGCGCTCATTCTGCTT +
Preference number: 6 (lower is better)
Translates to: ALFSSSLRRMNA*HSRAPPALILL
Trigger: AAGCAGAATGAGCGCTGGAGGCGCCCGACTGTGTCAGGCGTTCATTCTTCTGAGGCTAGATGAGAAAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360222.8
CDS CAA 90 bp TGGGAGAAGGTGAAGGTAACTGGGGAGCTGAGGTTTTGGGTGTCGTaGTTGCTCAGAAAGGCAGAGATCACATCTGAGAGCAGGATGGGG +
Preference number: 6 (lower is better)
Translates to: WEKVKVTGELRFWVS*LLRKAEITSESRMG
Trigger: CCCCATCCTGCTCTCAGATGTGATCTCTGCCTTTCTGAGCAACAACGACACCCAAAACCTCAGCTCCCCAGTTACCTTCACCTTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000594076.5
ENST00000594294.5
ENST00000595839.5
ENST00000596991.6
ENST00000601345.5
CDS GCA 72 bp TGTCTCGGGATCACTGACTGGGTCACCAGATTTCTGTaGCTGATTCCAGTCGAGCTGCATCACTGCCTGATT +
Preference number: 6 (lower is better)
Translates to: CLGITDWVTRFL*LIPVELHHCLI
Trigger: AATCAGGCAGTGATGCAGCTCGACTGGAATCAGGCACAGAAATCTGGTGACCCAGTCAGTGATCCCGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595208.5
CDS TCA 72 bp TACATGCACACCTGTCTCATCTCAGACTCCAGGAACTaGACCTATACTTGGGTACCTGCTCCCTGGATGCTG +
Preference number: 6 (lower is better)
Translates to: YMHTCLISDSRN*TYTWVPAPWML
Trigger: CAGCATCCAGGGAGCAGGTACCCAAGTATAGGTTCAGTTCCTGGAGTCTGAGATGAGACAGGTGTGCATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598500.1
CDS CAA 72 bp GTGAAGGTAACTGGGGAGCTGAGGTTTTGGGTGTCGTaGTTGCTCAGAAAGGCAGAGATCACATCTGAGAGC +
Preference number: 6 (lower is better)
Translates to: VKVTGELRFWVS*LLRKAEITSES
Trigger: GCTCTCAGATGTGATCTCTGCCTTTCTGAGCAACAACGACACCCAAAACCTCAGCTCCCCAGTTACCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315576.8
ENST00000392965.7
ENST00000594076.5
ENST00000594294.5
ENST00000595839.5
ENST00000596991.6
ENST00000601345.5
CDS TCA 72 bp GCACCTCCAGGGACAATTCTGTGCCTGCAGGATAACTaGAGTTCAACAGCCCATTGGAAAGGTTCTTGCTCA +
Preference number: 6 (lower is better)
Translates to: APPGTILCLQDN*SSTAHWKGSCS
Trigger: TGAGCAAGAACCTTTCCAATGGGCTGTTGAACTTCAGTTATCCTGCAGGCACAGAATTGTCCCTGGAGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315576.8
ENST00000360222.8
ENST00000392962.3
ENST00000392965.7
ENST00000594076.5
ENST00000594294.5
ENST00000595208.5
ENST00000595839.5
ENST00000596991.6
ENST00000601345.5
CDS CAA 90 bp GCACCTGCTGTGTGCTGGGCTCTGTTAGAAGCACCTATTCTTTCCTaGGTCCTCCTAGAAGGCATAGGAGTAGGCCATTATTATCATCCT +
Preference number: 6 (lower is better)
Translates to: APAVCWALLEAPILS*VLLEGIGVGHYYHP
Trigger: AGGATGATAATAATGGCCTACTCCTATGCCTTCTAGGAGGACCAAGGAAAGAATAGGTGCTTCTAACAGAGCCCAGCACACAGCAGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598500.1
CDS CCA 72 bp ATGAATTATCCCATGCCATTGAGGCATAGGATAATATaGCTTCAAGTGATCCCCAAGTTGTCCCGGGCTCAA +
Preference number: 6 (lower is better)
Translates to: MNYPMPLRHRII*LQVIPKLSRAQ
Trigger: TTGAGCCCGGGACAACTTGGGGATCACTTGAAGCCATATTATCCTATGCCTCAATGGCATGGGATAATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601345.5