RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000111452

Ensembl transcript IDs: ENST00000261654.10, ENST00000335486.10, ENST00000376682.8, ENST00000446583.6, ENST00000535015.5, ENST00000536988.1, ENST00000537489.5, ENST00000537600.2, ENST00000540207.1, ENST00000541143.5, ENST00000541937.2, ENST00000542091.5, ENST00000543617.2, ENST00000543826.5, ENST00000544673.5, ENST00000545900.5

Found 795 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGTGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCCGTaGCACTGTCACCATGTGGCAGGTGGCTGGTGCAGCCTGGGCCTC +
Preference number: 1 (lower is better)
Translates to: VCPPEHGCRGHTQGP*HCHHVAGGWCSLGL
Trigger: GAGGCCCAGGCTGCACCAGCCACCTGCCACATGGTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR TCA 90 bp CTGAGCGCAGCCTGGCCTGGTTGGCAGCCTCCCGGCTCACACGGCTaGCAGGTCGACGCGGTGGGCAGAGTGGCTGCTCTTGTCCCAAGG +
Preference number: 1 (lower is better)
Translates to: LSAAWPGWQPPGSHG*QVDAVGRVAALVPR
Trigger: CCTTGGGACAAGAGCAGCCACTCTGCCCACCGCGTCGACCTGTCAGCCGTGTGAGCCGGGAGGCTGCCAACCAGGCCAGGCTGCGCTCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR GCA 90 bp GGTGGATGCAAGGCAGGAGGGCCCACGCTGGCCTGGGCATCAGGCTaGTGGGCTGAGCAGTGTGCTCCGACAGCCAGAGTCACAGGGGAG +
Preference number: 1 (lower is better)
Translates to: GGCKAGGPTLAWASG*WAEQCAPTARVTGE
Trigger: CTCCCCTGTGACTCTGGCTGTCGGAGCACACTGCTCAGCCCAGCAGCCTGATGCCCAGGCCAGCGTGGGCCCTCCTGCCTTGCATCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR TCA 90 bp TCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTaGCCAGACGGAGCGCACTGTGCTACCTGCCGCGTGGTCTGCCCA +
Preference number: 1 (lower is better)
Translates to: SLSRSVGTQRRSVSW*PDGAHCATCRVVCP
Trigger: TGGGCAGACCACGCGGCAGGTAGCACAGTGCGCTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR GCA 90 bp GGTGCAGCCTGGGCCTCGCCTGACAGAAGAGCAAAGGTTCACCCCTaGAGACATGCTGCTCCCTGCCTACCCTCCCCATGCAGGAGAGGC +
Preference number: 1 (lower is better)
Translates to: GAAWASPDRRAKVHP*RHAAPCLPSPCRRG
Trigger: GCCTCTCCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGCCCAGGCTGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR GCA 90 bp AAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATaGAGGAGAGGCCTGCAGATGAGTGGTCCACTCCAGGCGACCAGG +
Preference number: 1 (lower is better)
Translates to: KVHPCRHAAPCLPSP*RRGLQMSGPLQATR
Trigger: CCTGGTCGCCTGGAGTGGACCACTCATCTGCAGGCCTCTCCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR CCA 90 bp CGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTaGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCA +
Preference number: 1 (lower is better)
Translates to: RGHGQLLWPKNNQGG*HTREEGILRPNWGP
Trigger: TGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR CCA 90 bp AACACAGAAGACACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTaGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACGGAGCGC +
Preference number: 1 (lower is better)
Translates to: NTEDTAVTSPPSPGQ*GLSAGRSHGDQTER
Trigger: GCGCTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTGTCTTCTGTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR CCA 90 bp AGGGCCCGTGGCACTGTCACCATGTGGCAGGTGGCTGGTGCAGCCTaGGCCTCGCCTGACAGAAGAGCAAAGGTTCACCCCTGCAGACAT +
Preference number: 1 (lower is better)
Translates to: RARGTVTMWQVAGAA*ASPDRRAKVHPCRH
Trigger: ATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGCCCAGGCTGCACCAGCCACCTGCCACATGGTGACAGTGCCACGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR TCA 90 bp CACTGTCACCATGTGGCAGGTGGCTGGTGCAGCCTGGGCCTCGCCTaGCAGAAGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTG +
Preference number: 1 (lower is better)
Translates to: HCHHVAGGWCSLGLA*QKSKGSPLQTCCSL
Trigger: CAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGCCCAGGCTGCACCAGCCACCTGCCACATGGTGACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR GCA 90 bp GACTCAGCGCAGGTCGGTCTCATGGTGACCAGACGGAGCGCACTGTaGTACCTGCCGCGTGGTCTGCCCATTAGAAACTTCGTAGAGTGC +
Preference number: 1 (lower is better)
Translates to: DSAQVGLMVTRRSAL*YLPRGLPIRNFVEC
Trigger: GCACTCTACGAAGTTTCTAATGGGCAGACCACGCGGCAGGTAGCACAGTGCGCTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR GCA 90 bp CCTGACAGAAGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTaGCTACCCTCCCCATGCAGGAGAGGCCTGCAGATGAGTGGTCCA +
Preference number: 1 (lower is better)
Translates to: PDRRAKVHPCRHAAP*LPSPCRRGLQMSGP
Trigger: TGGACCACTCATCTGCAGGCCTCTCCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR CCA 90 bp CAAGGAGGCTGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTaGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTC +
Preference number: 1 (lower is better)
Translates to: QGGWHTREEGILRPN*GPKRQNSQRMAEKL
Trigger: GAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR CCA 90 bp TGCTCCCTGCCTACCCTCCCCATGCAGGAGAGGCCTGCAGATGAGTaGTCCACTCCAGGCGACCAGGGGAAGAGTTACATTAAGAAGCCA +
Preference number: 1 (lower is better)
Translates to: CSLPTLPMQERPADE*STPGDQGKSYIKKP
Trigger: TGGCTTCTTAATGTAACTCTTCCCCTGGTCGCCTGGAGTGGACCACTCATCTGCAGGCCTCTCCTGCATGGGGAGGGTAGGCAGGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR GCA 90 bp GAGAGCAATTTCAGAGGCTGCAACAGCCGTAACCAGAGGAGTCTGTaGCGGTGCAACTCCGGAACCAGATGTGCGAGGGAGGTTGGGATT +
Preference number: 1 (lower is better)
Translates to: ESNFRGCNSRNQRSL*RCNSGTRCAREVGI
Trigger: AATCCCAACCTCCCTCGCACATCTGGTTCCGGAGTTGCACCGGCACAGACTCCTCTGGTTACGGCTGTTGCAGCCTCTGAAATTGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR TCA 90 bp TACCTGCCGCGTGGTCTGCCCATTAGAAACTTCGTAGAGTGCCTGTaGGCCATGAGGAAGCCTCTGGGGAAAGCAGTGCCCTGGAAAATG +
Preference number: 1 (lower is better)
Translates to: YLPRGLPIRNFVECL*AMRKPLGKAVPWKM
Trigger: CATTTTCCAGGGCACTGCTTTCCCCAGAGGCTTCCTCATGGCTCACAGGCACTCTACGAAGTTTCTAATGGGCAGACCACGCGGCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR GCA 90 bp AATTTCAGAGGCTGCAACAGCCGTAACCAGAGGAGTCTGTGCCGGTaGAACTCCGGAACCAGATGTGCGAGGGAGGTTGGGATTTGGAAA +
Preference number: 1 (lower is better)
Translates to: NFRGCNSRNQRSLCR*NSGTRCAREVGIWK
Trigger: TTTCCAAATCCCAACCTCCCTCGCACATCTGGTTCCGGAGTTGCACCGGCACAGACTCCTCTGGTTACGGCTGTTGCAGCCTCTGAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR GCA 90 bp AAACCAGGTTTGAATGTCTTACCCACATTTCACAGACACCACGAGTaGTATCAGCACAGTATGAACCTCACAGCCCGTATCTCGGTGGTG +
Preference number: 1 (lower is better)
Translates to: KPGLNVLPTFHRHHE*YQHSMNLTARISVV
Trigger: CACCACCGAGATACGGGCTGTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAGACATTCAAACCTGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR TCA 90 bp TCTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATaGACCTCACAGCCCGTATCTCGGTGGTGTCTTAATTCACATCTA +
Preference number: 1 (lower is better)
Translates to: SYPHFTDTTSAISTV*TSQPVSRWCLNSHL
Trigger: TAGATGTGAATTAAGACACCACCGAGATACGGGCTGTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp CGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCAACTGATGACGGGTGCGTGGGGACCTaGACCACCTCTTTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: RLPPTARARLGQGPPTDDGCVGT*TTSLAL
Trigger: CAGGGCCAAAGAGGTGGTTCAGGTCCCCACGCACCC...GTCATCAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp GCAGCAGCCAGGTGTGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCCCACACACCCCCAGCTaGCTGCGCCTGACTGAGGGT +
Preference number: 2 (lower is better)
Translates to: AAARCARQSTVAGAIRRAPHTPS*LRLTEG
Trigger: ACCCTCAGTCAGGCGCAGGCAGCTGGGGGTGTGTGG...GGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCACACCTGGCTGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGCCAGCTGCCTGCGCCTaGCTGAGGGTGCGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLPAACA*LRVRGD
Trigger: GTCCCCACGCACCCTCAGTCAGGCGCAGGCAGCTGG...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR CAA 90 bp GCTCACACGGCTGACAGGTCGACGCGGTGGGCAGAGTGGCTGCTCTaGTCCCAAGGGCTGAGCTTGGTGGAGGCCATGCCTGGCCGGGTC +
Preference number: 2 (lower is better)
Translates to: AHTADRSTRWAEWLL*SQGLSLVEAMPGRV
Trigger: GACCCGGCCAGGCATGGCCTCCACCAAGCTCAGCCCTTGGGACAAGAGCAGCCACTCTGCCCACCGCGTCGACCTGTCAGCCGTGTGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR TCA 90 bp GGCCCACGCCGGCACCACCTACAGAGACACACACCACGGCTAGCGCCGGCTGTGATCAGGCTGCTGGGCTaGGCAGTGTGCTCCGACAGC +
Preference number: 2 (lower is better)
Translates to: GPRRHHLQRHTPRLAPAVIRLLG*AVCSDS
Trigger: GCTGTCGGAGCACACTGCTCAGCCCAGCAGCCTGAT...CACAGCCGGCGCTAGCCGTGGTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp TGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCCGTGGCACTGTCACCCACCTCTTTGGCCCTaGGTCCCCAAGCCCCACCAA +
Preference number: 2 (lower is better)
Translates to: CPPEHGCRGHTQGPWHCHPPLWP*VPKPHQ
Trigger: TTGGTGGGGCTTGGGGACTCAGGGCCAAAGAGGTGG...GTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp GGCCCACGCCGGCACCACCTACAGAGACACACACCACGGCTAGCGCCGGCTGTGCCACCTCTTTGGCCCTaGGTCCCCAAGCCCCACCAA +
Preference number: 2 (lower is better)
Translates to: GPRRHHLQRHTPRLAPAVPPLWP*VPKPHQ
Trigger: TTGGTGGGGCTTGGGGACTCAGGGCCAAAGAGGTGG...CACAGCCGGCGCTAGCCGTGGTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp GCAGCAGCCAGGTGTGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCTCACCCCTGCAGACATaGTGCTCCCTGCCTACCCTC +
Preference number: 2 (lower is better)
Translates to: AAARCARQSTVAGAIRRASPLQT*CSLPTL
Trigger: GAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGA...GGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCACACCTGGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp TGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCCGTGGCACTGTCACGTGGCTGGTGCAGCCTaGGCCTCGCCTGACAGAAGA +
Preference number: 2 (lower is better)
Translates to: CPPEHGCRGHTQGPWHCHVAGAA*ASPDRR
Trigger: TCTTCTGTCAGGCGAGGCCCAGGCTGCACCAGCCAC...GTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp GCAGCAGCCAGGTGTGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCACTGAACAGCGGCCTTaGCCTGCAGCAGCCAGGTGT +
Preference number: 2 (lower is better)
Translates to: AAARCARQSTVAGAIRRATEQRP*PAAARC
Trigger: ACACCTGGCTGCTGCAGGCCAAGGCCGCTGTTCAGT...GGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCACACCTGGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR CAA 90 bp CTCACCTGGAGAGTCAACGACTCCCGCCCACGGCTCGAGCTCGGCTaGGGCAGGGGCCCCCAACTGATGACACAGCACAGGTTGGCCCAC +
Preference number: 2 (lower is better)
Translates to: LTWRVNDSRPRLELG*GRGPQLMTQHRLAH
Trigger: GTGGGCCAACCTGTGCTGTGTCATCAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCGTTGACTCTCCAGGTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp GGCCCACGCCGGCACCACCTACAGAGACACACACCACGGCTAGCGCCGGCTGTGCCAAGGCACAGAGGCTaGACATCCCCTCCTGGTGCT +
Preference number: 2 (lower is better)
Translates to: GPRRHHLQRHTPRLAPAVPRHRG*TSPPGA
Trigger: AGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGG...CACAGCCGGCGCTAGCCGTGGTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp CGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCCTCAAGGCCGGGTGCGTGGGGACCTaGACCACCTCTTTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: RMAEKLPQAQAPSGSLKAGCVGT*TTSLAL
Trigger: CAGGGCCAAAGAGGTGGTTCAGGTCCCCACGCACCC...GGCCTTGAGGCTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp CCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCAGACACTGGCCAGCTGCCTGCGCCTaGCTGAGGGTGCGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: PRLAPAVGNSPLSGFRHWPAACA*LRVRGD
Trigger: GTCCCCACGCACCCTCAGTCAGGCGCAGGCAGCTGG...CCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp GCAGCAGCCAGGTGTGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCGCGGGGAAGGGATCGTaGGAGCAATTTCAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: AAARCARQSTVAGAIRRAAGKGS*EQFQRL
Trigger: CAGCCTCTGAAATTGCTCTCACGATCCCTTCCCCGC...GGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCACACCTGGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR GCA 90 bp CACGGTTGCAGGGGCCATACGCAGGGCCCGTGGCACTGTCACCATGTGGCAGGTCCCCTGCAGACATGCTaGTCCCTGCCTACCCTCCCC +
Preference number: 2 (lower is better)
Translates to: HGCRGHTQGPWHCHHVAGPLQTC*SLPTLP
Trigger: GGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGG...ACCTGCCACATGGTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGGGGGTCGCCCTCACCTaGAGAGTCAACGACTCCCGC +
Preference number: 2 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLGVALT*RVNDSR
Trigger: GCGGGAGTCGTTGACTCTCCAGGTGAGGGCGACCCC...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp CTGAGGGTGCGTGGGGACCTGAACCACCTCTTTGGCCCTGAGTCCCCAAGCCCCATCAGGCTGCTGGGCTaGGCAGTGTGCTCCGACAGC +
Preference number: 2 (lower is better)
Translates to: LRVRGDLNHLFGPESPSPIRLLG*AVCSDS
Trigger: GCTGTCGGAGCACACTGCTCAGCCCAGCAGCCTGAT...GGGGCTTGGGGACTCAGGGCCAAAGAGGTGGTTCAGGTCCCCACGCACCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGGCCTGGGCATCAGGCTaGTGGGCTGAGCAGTGTGCT +
Preference number: 2 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLAWASG*WAEQCA
Trigger: AGCACACTGCTCAGCCCAGCAGCCTGATGCCCAGGC...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGAGACGGAGCGCACTGTaGTACCTGCCGCGTGGTCTG +
Preference number: 2 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLRRSAL*YLPRGL
Trigger: CAGACCACGCGGCAGGTAGCACAGTGCGCTCCGTCT...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp CGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCAACTGATGACAGGAGTCTGTGCCGGTaGAACTCCGGAACCAGATGT +
Preference number: 2 (lower is better)
Translates to: RLPPTARARLGQGPPTDDRSLCR*NSGTRC
Trigger: ACATCTGGTTCCGGAGTTGCACCGGCACAGACTCCT...GTCATCAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR CCA 90 bp ACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGTTCTGAGCGCAGCCTaGCCTGGTTGGCAGCCTCCC +
Preference number: 2 (lower is better)
Translates to: TSPPSPGQWGLSAGRSHGVLSAA*PGWQPP
Trigger: GGGAGGCTGCCAACCAGGCCAGGCTGCGCTCAGAAC...ACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp CGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCCTCAAGGCCCCTCCACTTTCCACCTaGACACCAGGCACTGCGGGG +
Preference number: 2 (lower is better)
Translates to: RMAEKLPQAQAPSGSLKAPPLST*TPGTAG
Trigger: CCCCGCAGTGCCTGGTGTCCAGGTGGAAAGTGGAGG...GGCCTTGAGGCTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp ACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGGAAGGGCTTCGCGTTaGAGGTGCGGGCAGAGCTGC +
Preference number: 2 (lower is better)
Translates to: TSPPSPGQWGLSAGRSHGGRASR*RCGQSC
Trigger: GCAGCTCTGCCCGCACCTCCAACGCGAAGCCCTTCC...ACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR CCA 90 bp CACGGTTGCAGGGGCCATACGCAGGGCCCGTGGCACTGTCACCATGTGGCAGGTGACAGGTCGACGCGGTaGGCAGAGTGGCTGCTCTTG +
Preference number: 2 (lower is better)
Translates to: HGCRGHTQGPWHCHHVAGDRSTR*AEWLLL
Trigger: CAAGAGCAGCCACTCTGCCCACCGCGTCGACCTGTC...ACCTGCCACATGGTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR CAA 90 bp CCTGGCCGGGTCCCATTCATGAGGTCCGAGTGGAAGGGCTTCGCGTaGGAGGTGCGGGCAGAGCTGCTCGTGAGCGACCAGACCTTGGTT +
Preference number: 2 (lower is better)
Translates to: PGRVPFMRSEWKGFA*EVRAELLVSDQTLV
Trigger: AACCAAGGTCTGGTCGCTCACGAGCAGCTCTGCCCGCACCTCCAACGCGAAGCCCTTCCACTCGGACCTCATGAATGGGACCCGGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR TCA 90 bp CACGGTTGCAGGGGCCATACGCAGGGCCCGTGGCACTGTCACCATGTGGCAGGTAGGTCGGTCTCATGGTaGCCAGACGGAGCGCACTGT +
Preference number: 2 (lower is better)
Translates to: HGCRGHTQGPWHCHHVAGRSVSW*PDGAHC
Trigger: ACAGTGCGCTCCGTCTGGTCACCATGAGACCGACCT...ACCTGCCACATGGTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp GGAGGCTGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGCAGCCCACGGGTGGATaGAAGGCAGGAGGGCCCACG +
Preference number: 2 (lower is better)
Translates to: GGWHTREEGILRPNWGPKQPTGG*KAGGPT
Trigger: CGTGGGCCCTCCTGCCTTGCATCCACCCGTGGGCTG...CTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp GAGACACACACCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCAGCCCACGGGTGGATaGAAGGCAGGAGGGCCCACG +
Preference number: 2 (lower is better)
Translates to: ETHTTASAGCGELTTQWIQPTGG*KAGGPT
Trigger: CGTGGGCCCTCCTGCCTTGCATCCACCCGTGGGCTG...AATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGGTGTGTGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp GAGACACACACCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTAACATCCCCTCCTGGTaGTGCGGGACCGGCCCCGAG +
Preference number: 2 (lower is better)
Translates to: ETHTTASAGCGELTTQWINIPSW*CGTGPE
Trigger: CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTT...AATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGGTGTGTGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp CCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCAGACACTGGCCACACACCCCCAGCTaGCTGCGCCTGACTGAGGGT +
Preference number: 2 (lower is better)
Translates to: PRLAPAVGNSPLSGFRHWPHTPS*LRLTEG
Trigger: ACCCTCAGTCAGGCGCAGGCAGCTGGGGGTGTGTGG...CCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp GAGAGTCAACGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCACAGACCTTGGTTTTGTaGTTGAAGGCGGCTCTCACC +
Preference number: 2 (lower is better)
Translates to: ESQRLPPTARARLGQGPPQTLVL*LKAALT
Trigger: GGTGAGAGCCGCCTTCAAGCACAAAACCAAGGTCTG...TGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCGTTGACTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR CCA 90 bp ACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTTGGGCATCAGGCTGCTaGGCTGAGCAGTGTGCTCCG +
Preference number: 2 (lower is better)
Translates to: TSPPSPGQWGLSAGRSHGWASGC*AEQCAP
Trigger: CGGAGCACACTGCTCAGCCCAGCAGCCTGATGCCCA...ACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp GCTCAAGGGCACCATCACAGTCAGGCCACTGTGTCCTGGGAATCCCCCGAGGAACAGGAGGGCCCACGCTaGCCTGGGCATCAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: AQGHHHSQATVSWESPEEQEGPR*PGHQAA
Trigger: AGCAGCCTGATGCCCAGGCCAGCGTGGGCCCTCCTG...TTCCTCGGGGGATTCCCAGGACACAGTGGCCTGACTGTGATGGTGCCCTTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp CTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACACTCAGCCCACGGGTaGATGCAAGGCAGGAGGGCC +
Preference number: 2 (lower is better)
Translates to: LPLQVSGDSAQVGLMVTRHSAHG*MQGRRA
Trigger: GGCCCTCCTGCCTTGCATCCACCCGTGGGCTGAGTG...TCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp CGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCAACTGATGACAGTGGATTCAGACACTaGGGACTCCGCATGCTCTTC +
Preference number: 2 (lower is better)
Translates to: RLPPTARARLGQGPPTDDSGFRH*GLRMLF
Trigger: GAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACT...GTCATCAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp AAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCACTCAGCCCACGGGTaGATGCAAGGCAGGAGGGCC +
Preference number: 2 (lower is better)
Translates to: KLTADGREAPPSTGTIRQHSAHG*MQGRRA
Trigger: GGCCCTCCTGCCTTGCATCCACCCGTGGGCTGAGTG...CTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp TGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCCGTGGCACTGTCACAGTGGATTCAGACACTaGGGACTCCGCATGCTCTTC +
Preference number: 2 (lower is better)
Translates to: CPPEHGCRGHTQGPWHCHSGFRH*GLRMLF
Trigger: GAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACT...GTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp GCCTCGCCTGACAGAAGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCATCAGGCTGCTGGGCTaGGCAGTGTGCTCCGACAGC +
Preference number: 2 (lower is better)
Translates to: ASPDRRAKVHPCRHAAPCIRLLG*AVCSDS
Trigger: GCTGTCGGAGCACACTGCTCAGCCCAGCAGCCTGAT...GCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp CGAATTGGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCGGGTGCGTGGGGACCTaGACCACCTCTTTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: RIGVQRGKTHSGWPRSSPGCVGT*TTSLAL
Trigger: CAGGGCCAAAGAGGTGGTTCAGGTCCCCACGCACCC...GGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp AGCGCAGGTCGGTCTCATGGTGACCAGACGGAGCGCACTGTGCTACCTGCCGCGTTCGTAGAGTGCCTGTaGGCCATGAGGAAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: SAGRSHGDQTERTVLPAAFVECL*AMRKPL
Trigger: CAGAGGCTTCCTCATGGCTCACAGGCACTCTACGAA...CGCGGCAGGTAGCACAGTGCGCTCCGTCTGGTCACCATGAGACCGACCTGCGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp GTGGGGAACTCACCACTCAGTGGATTCAGACACTGGGGACTCCGCATGCTCTTCAACATCCCCTCCTGGTaGTGCGGGACCGGCCCCGAG +
Preference number: 2 (lower is better)
Translates to: VGNSPLSGFRHWGLRMLFNIPSW*CGTGPE
Trigger: CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTT...GAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp GAGACACACACCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTGCTTGGTGGAGGCCATaGCTGGCCGGGTCCCATTCA +
Preference number: 2 (lower is better)
Translates to: ETHTTASAGCGELTTQWIAWWRP*LAGSHS
Trigger: TGAATGGGACCCGGCCAGGCATGGCCTCCACCAAGC...AATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGGTGTGTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR CCA 90 bp CGAATTGGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCGTTCTGAGCGCAGCCTaGCCTGGTTGGCAGCCTCCC +
Preference number: 2 (lower is better)
Translates to: RIGVQRGKTHSGWPRSSPVLSAA*PGWQPP
Trigger: GGGAGGCTGCCAACCAGGCCAGGCTGCGCTCAGAAC...GGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp GGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACAGGGGTCGCCCTCACCTaGAGAGTCAACGACTCCCGC +
Preference number: 2 (lower is better)
Translates to: GSKEAKLTADGREAPPSTGVALT*RVNDSR
Trigger: GCGGGAGTCGTTGACTCTCCAGGTGAGGGCGACCCC...TGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp CACGGTTGCAGGGGCCATACGCAGGGCCCGTGGCACTGTCACCATGTGGCAGGTAAAACTCACAGCGGATaGCCGAGAAGCTCCCCCAAG +
Preference number: 2 (lower is better)
Translates to: HGCRGHTQGPWHCHHVAGKTHSG*PRSSPK
Trigger: CTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTT...ACCTGCCACATGGTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp GGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACAGCCTGGGCATCAGGCTaGTGGGCTGAGCAGTGTGCT +
Preference number: 2 (lower is better)
Translates to: GSKEAKLTADGREAPPSTAWASG*WAEQCA
Trigger: AGCACACTGCTCAGCCCAGCAGCCTGATGCCCAGGC...TGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp AACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCAGCCTGGGCATCAGGCTaGTGGGCTGAGCAGTGTGCT +
Preference number: 2 (lower is better)
Translates to: NTHVQTAARRGSMGKGGAAWASG*WAEQCA
Trigger: AGCACACTGCTCAGCCCAGCAGCCTGATGCCCAGGC...TGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp GGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACAACTGGGGACTCCGCATaGTCTTCCCCACACACCCCC +
Preference number: 2 (lower is better)
Translates to: GSKEAKLTADGREAPPSTTGDSA*SSPHTP
Trigger: GGGGGTGTGTGGGGAAGAGCATGCGGAGTCCCCAGT...TGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp AAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCAGGAGGCGCACTGTGCTACCTaGCGCGTGGTCTGCCCATTA +
Preference number: 2 (lower is better)
Translates to: KGSPLQTCCSLPTLPMQEAHCAT*RVVCPL
Trigger: TAATGGGCAGACCACGCGGCAGGTAGCACAGTGCGC...CTCCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp AGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCGCGCACTGTGCTACCTaGCGCGTGGTCTGCCCATTA +
Preference number: 2 (lower is better)
Translates to: RAKVHPCRHAAPCLPSPCAHCAT*RVVCPL
Trigger: TAATGGGCAGACCACGCGGCAGGTAGCACAGTGCGC...GCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp GCCTCGCCTGACAGAAGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCTCCACAGCTGAGCTGTaGATCGCTGCTCTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: ASPDRRAKVHPCRHAAPCSTAEL*IAALWG
Trigger: GCCCCACAGAGCAGCGATGCACAGCTCAGCTGTGGA...GCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR CCA 90 bp TTTCTGGGGTCACGGGAGCCTGGGGCAGTGGCTAAACATGGGACTTTAGTCCATCAGGAGGGCCCACGCTaGCCTGGGCATCAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: FLGSREPGAVAKHGTLVHQEGPR*PGHQAA
Trigger: AGCAGCCTGATGCCCAGGCCAGCGTGGGCCCTCCTG...ATGGACTAAAGTCCCATGTTTAGCCACTGCCCCAGGCTCCCGTGACCCCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp AGCGCAGGTCGGTCTCATGGTGACCAGACGGAGCGCACTGTGCTACCTGCCGCGGGGAAAGCAGTGCCCTaGAAAATGCCCTCCACTTTC +
Preference number: 2 (lower is better)
Translates to: SAGRSHGDQTERTVLPAAGKAVP*KMPSTF
Trigger: GAAAGTGGAGGGCATTTTCCAGGGCACTGCTTTCCC...CGCGGCAGGTAGCACAGTGCGCTCCGTCTGGTCACCATGAGACCGACCTGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR CAA 90 bp TTGGAGGTGCGGGCAGAGCTGCTCGTGAGCGACCAGACCTTGGTTTaGTGCTTGAAGGCGGCTCTCACCTTGAAAGCGGGGAAGGGATCG +
Preference number: 2 (lower is better)
Translates to: LEVRAELLVSDQTLV*CLKAALTLKAGKGS
Trigger: CGATCCCTTCCCCGCTTTCAAGGTGAGAGCCGCCTTCAAGCACAAAACCAAGGTCTGGTCGCTCACGAGCAGCTCTGCCCGCACCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR TCA 90 bp GGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACAAGGCGGCTCTCACCTTaGAAGCGGGGAAGGGATCGT +
Preference number: 2 (lower is better)
Translates to: GSKEAKLTADGREAPPSTRRLSP*KRGRDR
Trigger: ACGATCCCTTCCCCGCTTTCAAGGTGAGAGCCGCCT...TGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR GCA 90 bp ATGAGGATCTGGCACTGTGGTCCATGTGACCTGGTTTCTGGGGTCACGGGAGCCAGACATGCTGCTCCCTaGCTACCCTCCCCATGCAGG +
Preference number: 2 (lower is better)
Translates to: MRIWHCGPCDLVSGVTGARHAAP*LPSPCR
Trigger: CCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCT...GGCTCCCGTGACCCCAGAAACCAGGTCACATGGACCACAGTGCCAGATCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp AAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCAGGAGAACCAGAGGAGTCTGTaGCGGTGCAACTCCGGAACC +
Preference number: 2 (lower is better)
Translates to: KGSPLQTCCSLPTLPMQENQRSL*RCNSGT
Trigger: GGTTCCGGAGTTGCACCGGCACAGACTCCTCTGGTT...CTCCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR CCA 90 bp AGAGCTGCTCGTGAGCGACCAGACCTTGGTTTTGTGCTTGAAGGCGGCTCTCACTGGGCATCAGGCTGCTaGGCTGAGCAGTGTGCTCCG +
Preference number: 2 (lower is better)
Translates to: RAARERPDLGFVLEGGSHWASGC*AEQCAP
Trigger: CGGAGCACACTGCTCAGCCCAGCAGCCTGATGCCCA...GTGAGAGCCGCCTTCAAGCACAAAACCAAGGTCTGGTCGCTCACGAGCAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR CCA 90 bp CTGATGACACAGCACAGGTTGGCCCACGCCGGCACCACCTACAGAGACACACACCTGACTGAGGGTGCGTaGGGACCTGAACCACCTCTT +
Preference number: 2 (lower is better)
Translates to: LMTQHRLAHAGTTYRDTHLTEGA*GPEPPL
Trigger: AAGAGGTGGTTCAGGTCCCCACGCACCCTCAGTCAG...GTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCCAACCTGTGCTGTGTCATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp GAGACACACACCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCTGACTGAGGGTGCGTaGGGACCTGAACCACCTCTT +
Preference number: 2 (lower is better)
Translates to: ETHTTASAGCGELTTQWILTEGA*GPEPPL
Trigger: AAGAGGTGGTTCAGGTCCCCACGCACCCTCAGTCAG...AATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGGTGTGTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR CAA 90 bp CCAAGGAGGCTGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATaGGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCT +
Preference number: 2 (lower is better)
Translates to: PRRLAHEGGGHLKAE*GSKEAKLTADGREA
Trigger: AGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp GCAGCAGCCAGGTGTGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCCTTAATTCACATCTATaGTCCCAAACCTGTGTTCCA +
Preference number: 2 (lower is better)
Translates to: AAARCARQSTVAGAIRRALNSHL*SQTCVP
Trigger: TGGAACACAGGTTTGGGATCATAGATGTGAATTAAG...GGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCACACCTGGCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp CCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACAGAAGACCCGGCTCACACGGCTaGCAGGTCGACGCGGTGGGC +
Preference number: 2 (lower is better)
Translates to: PISSGAESESINFPQHRRPGSHG*QVDAVG
Trigger: GCCCACCGCGTCGACCTGTCAGCCGTGTGAGCCGGG...TCTTCTGTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR GCA 90 bp GCCTCGCCTGACAGAAGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTCTGGGGAAAGCAGTaGCCTGGAAAATGCCCTCCA +
Preference number: 2 (lower is better)
Translates to: ASPDRRAKVHPCRHAAPCLWGKQ*PGKCPP
Trigger: TGGAGGGCATTTTCCAGGGCACTGCTTTCCCCAGAG...GCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp AAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCAAGGAGAGGGTCCATaGGCAAAGGTGGGGCATTTC +
Preference number: 2 (lower is better)
Translates to: KLTADGREAPPSTGTIRQQGEGP*AKVGHF
Trigger: GAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTG...CTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp GCCTCGCCTGACAGAAGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCAAGGAGAGGGTCCATaGGCAAAGGTGGGGCATTTC +
Preference number: 2 (lower is better)
Translates to: ASPDRRAKVHPCRHAAPCQGEGP*AKVGHF
Trigger: GAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTG...GCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp ACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAAAACTCACACTCAGCCCACGGGTaGATGCAAGGCAGGAGGGCC +
Preference number: 2 (lower is better)
Translates to: TREEGILRPNWGPKRQNSHSAHG*MQGRRA
Trigger: GGCCCTCCTGCCTTGCATCCACCCGTGGGCTGAGTG...TGAGTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp CGAATTGGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCCTGACTGAGGGTGCGTaGGGACCTGAACCACCTCTT +
Preference number: 2 (lower is better)
Translates to: RIGVQRGKTHSGWPRSSPLTEGA*GPEPPL
Trigger: AAGAGGTGGTTCAGGTCCCCACGCACCCTCAGTCAG...GGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp CTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATGAACCTCACCCAGCTGCCTGCGCCTaGCTGAGGGTGCGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: LTHISQTPRVLSAQYEPHPAACA*LRVRGD
Trigger: GTCCCCACGCACCCTCAGTCAGGCGCAGGCAGCTGG...GTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp AGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCTGGGATTTGGAAATATaGGTCGGAGCTGCTGGCTCC +
Preference number: 2 (lower is better)
Translates to: RAKVHPCRHAAPCLPSPCWDLEI*VGAAGS
Trigger: GGAGCCAGCAGCTCCGACTCATATTTCCAAATCCCA...GCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR GCA 90 bp TCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACGGAGAGCAATTTCAGAGGCTaGAACAGCCGTAACCAGAGG +
Preference number: 2 (lower is better)
Translates to: SPGQWGLSAGRSHGDQTESNFRG*NSRNQR
Trigger: CCTCTGGTTACGGCTGTTGCAGCCTCTGAAATTGCT...CTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR CCA 90 bp GGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACACAAGGAGAGGGTCCATaGGCAAAGGTGGGGCATTTC +
Preference number: 2 (lower is better)
Translates to: GSKEAKLTADGREAPPSTQGEGP*AKVGHF
Trigger: GAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTG...TGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp CTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATGAACCTCACAACATCCCCTCCTGGTaGTGCGGGACCGGCCCCGAG +
Preference number: 2 (lower is better)
Translates to: LTHISQTPRVLSAQYEPHNIPSW*CGTGPE
Trigger: CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTT...GTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp GGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGTGCCAAGGCACAGAGGCTaGACATCCCCTCCTGGTGCT +
Preference number: 2 (lower is better)
Translates to: GHRLHRKLTLKQGRHRGVPRHRG*TSPPGA
Trigger: AGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGG...CACACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp AAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCAGGAGGTCCATGGGCAAAGGTaGGGCATTTCATTCTGTTTG +
Preference number: 2 (lower is better)
Translates to: KGSPLQTCCSLPTLPMQEVHGQR*GISFCL
Trigger: CAAACAGAATGAAATGCCCCACCTTTGCCCATGGAC...CTCCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp AGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCGTCCATGGGCAAAGGTaGGGCATTTCATTCTGTTTG +
Preference number: 2 (lower is better)
Translates to: RAKVHPCRHAAPCLPSPCVHGQR*GISFCL
Trigger: CAAACAGAATGAAATGCCCCACCTTTGCCCATGGAC...GCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp AAGGGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTTGGGCATCAGGCTGCTaGGCTGAGCAGTGTGCTCCG +
Preference number: 2 (lower is better)
Translates to: KGHRLHRKLTLKQGRHRGWASGC*AEQCAP
Trigger: CGGAGCACACTGCTCAGCCCAGCAGCCTGATGCCCA...ACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp GGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACAGAACTCACCACTCAGTaGATTCAGACACTGGGGACT +
Preference number: 2 (lower is better)
Translates to: GSKEAKLTADGREAPPSTELTTQ*IQTLGT
Trigger: AGTCCCCAGTGTCTGAATCCACTGAGTGGTGAGTTC...TGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp CCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACAGAAGAGGGGTCGCCCTCACCTaGAGAGTCAACGACTCCCGC +
Preference number: 2 (lower is better)
Translates to: PISSGAESESINFPQHRRGVALT*RVNDSR
Trigger: GCGGGAGTCGTTGACTCTCCAGGTGAGGGCGACCCC...TCTTCTGTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp CTATCAGCACAGTATGAACCTCACAGCCCGTATCTCGGTGGTGTCTTAATTCACCCCTCTCCAGGTCAGTaGGGACTCAGCGCAGGTCGG +
Preference number: 2 (lower is better)
Translates to: LSAQYEPHSPYLGGVLIHPSPGQ*GLSAGR
Trigger: CCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGG...GTGAATTAAGACACCACCGAGATACGGGCTGTGAGGTTCATACTGTGCTGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp TTTCTGGGGTCACGGGAGCCTGGGGCAGTGGCTAAACATGGGACTTTAGTCCATGGCGTGATGAGGATCTaGCACTGTGGTCCATGTGAC +
Preference number: 2 (lower is better)
Translates to: FLGSREPGAVAKHGTLVHGVMRI*HCGPCD
Trigger: GTCACATGGACCACAGTGCCAGATCCTCATCACGCC...ATGGACTAAAGTCCCATGTTTAGCCACTGCCCCAGGCTCCCGTGACCCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp AAGGGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGCGCACTGTGCTACCTaGCGCGTGGTCTGCCCATTA +
Preference number: 2 (lower is better)
Translates to: KGHRLHRKLTLKQGRHRGAHCAT*RVVCPL
Trigger: TAATGGGCAGACCACGCGGCAGGTAGCACAGTGCGC...ACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp TATCCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACAGAGTTCTGAGCGCAGCCTaGCCTGGTTGGCAGCCTCCC +
Preference number: 2 (lower is better)
Translates to: YPISSGAESESINFPQHRVLSAA*PGWQPP
Trigger: GGGAGGCTGCCAACCAGGCCAGGCTGCGCTCAGAAC...TCTGTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp CTGATGACACAGCACAGGTTGGCCCACGCCGGCACCACCTACAGAGACACACACATCTTAAGGCCGAATTaGGGTCCAAAGAGGCAAAAC +
Preference number: 2 (lower is better)
Translates to: LMTQHRLAHAGTTYRDTHILRPN*GPKRQN
Trigger: GTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGAT...GTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCCAACCTGTGCTGTGTCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp AAGAAGCCACCAGGTGGGCTGCAAAAGGGCCACAGGCTCCATAGAAAACTCACTTTCATGAGGTCCGAGTaGAAGGGCTTCGCGTTGGAG +
Preference number: 2 (lower is better)
Translates to: KKPPGGLQKGHRLHRKLTFMRSE*KGFALE
Trigger: CTCCAACGCGAAGCCCTTCCACTCGGACCTCATGAA...AGTGAGTTTTCTATGGAGCCTGTGGCCCTTTTGCAGCCCACCTGGTGGCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR CCA 90 bp AAACCAGGTTTGAATGTCTTACCCACATTTCACAGACACCACGAGTGCTATCAGGCAGCCTGGCCTGGTTaGCAGCCTCCCGGCTCACAC +
Preference number: 2 (lower is better)
Translates to: KPGLNVLPTFHRHHECYQAAWPG*QPPGSH
Trigger: GTGTGAGCCGGGAGGCTGCCAACCAGGCCAGGCTGC...CTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAGACATTCAAACCTGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR CCA 90 bp GGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGTGAAAACTCACAGCGGATaGCCGAGAAGCTCCCCCAAG +
Preference number: 2 (lower is better)
Translates to: GHRLHRKLTLKQGRHRGVKTHSG*PRSSPK
Trigger: CTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTT...CACACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp AAGAAGCCACCAGGTGGGCTGCAAAAGGGCCACAGGCTCCATAGAAAACTCACTGGGAAAGCAGTGCCCTaGAAAATGCCCTCCACTTTC +
Preference number: 2 (lower is better)
Translates to: KKPPGGLQKGHRLHRKLTGKAVP*KMPSTF
Trigger: GAAAGTGGAGGGCATTTTCCAGGGCACTGCTTTCCC...AGTGAGTTTTCTATGGAGCCTGTGGCCCTTTTGCAGCCCACCTGGTGGCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp AAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCAGGAGCTTAATTCACATCTATaGTCCCAAACCTGTGTTCCA +
Preference number: 2 (lower is better)
Translates to: KGSPLQTCCSLPTLPMQELNSHL*SQTCVP
Trigger: TGGAACACAGGTTTGGGATCATAGATGTGAATTAAG...CTCCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp AATTATCCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACGGAGAGGCCTGCAGATaGGTGGTCCACTCCAGGCGA +
Preference number: 2 (lower is better)
Translates to: NYPISSGAESESINFPQHGEACR*VVHSRR
Trigger: TCGCCTGGAGTGGACCACTCATCTGCAGGCCTCTCC...GTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGGATAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp AAGAAGCCACCAGGTGGGCTGCAAAAGGGCCACAGGCTCCATAGAAAACTCACTGAACTCACCACTCAGTaGATTCAGACACTGGGGACT +
Preference number: 2 (lower is better)
Translates to: KKPPGGLQKGHRLHRKLTELTTQ*IQTLGT
Trigger: AGTCCCCAGTGTCTGAATCCACTGAGTGGTGAGTTC...AGTGAGTTTTCTATGGAGCCTGTGGCCCTTTTGCAGCCCACCTGGTGGCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp AAACCAGGTTTGAATGTCTTACCCACATTTCACAGACACCACGAGTGCTATCAGAGACATGCTGCTCCCTaGCTACCCTCCCCATGCAGG +
Preference number: 2 (lower is better)
Translates to: KPGLNVLPTFHRHHECYQRHAAP*LPSPCR
Trigger: CCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCT...CTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAGACATTCAAACCTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp CCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACAGAAGAAAAACTCACAGCGGATaGCCGAGAAGCTCCCCCAAG +
Preference number: 2 (lower is better)
Translates to: PISSGAESESINFPQHRRKTHSG*PRSSPK
Trigger: CTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTT...TCTTCTGTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CCA 90 bp GGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGTGCAGCCCGTATCTCGGTaGTGTCTTAATTCACATCTA +
Preference number: 2 (lower is better)
Translates to: GHRLHRKLTLKQGRHRGVQPVSR*CLNSHL
Trigger: TAGATGTGAATTAAGACACCACCGAGATACGGGCTG...CACACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR GCA 90 bp AAACCAGGTTTGAATGTCTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGACACCACGAGTaGTATCAGCACAGTATGAAC +
Preference number: 2 (lower is better)
Translates to: KPGLNVLPTFHRHHECYQHRHHE*YQHSMN
Trigger: GTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTG...CTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAGACATTCAAACCTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR TCA 90 bp AAACCAGGTTTGAATGTCTTACCCACATTTCACAGACACCACGAGTGCTATCAGTATCAAAACCAGGTTTaGATGTCTTACCCACATTTC +
Preference number: 2 (lower is better)
Translates to: KPGLNVLPTFHRHHECYQYQNQV*MSYPHF
Trigger: GAAATGTGGGTAAGACATTCAAACCTGGTTTTGATA...CTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAGACATTCAAACCTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR GCA 72 bp GCCTGCAGCAGCCAGGTGTGCCCGCCAGAGCACGGTTaGAGGGGCCATACGCAGGGCCCGTGGCACTGTCAC +
Preference number: 3 (lower is better)
Translates to: ACSSQVCPPEHG*RGHTQGPWHCH
Trigger: GTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCACACCTGGCTGCTGCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR CCA 72 bp GGGGCCATACGCAGGGCCCGTGGCACTGTCACCATGTaGCAGGTGGCTGGTGCAGCCTGGGCCTCGCCTGAC +
Preference number: 3 (lower is better)
Translates to: GAIRRARGTVTM*QVAGAAWASPD
Trigger: GTCAGGCGAGGCCCAGGCTGCACCAGCCACCTGCCACATGGTGACAGTGCCACGGGCCCTGCGTATGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR TCA 72 bp GCCTGGCCTGGTTGGCAGCCTCCCGGCTCACACGGCTaGCAGGTCGACGCGGTGGGCAGAGTGGCTGCTCTT +
Preference number: 3 (lower is better)
Translates to: AWPGWQPPGSHG*QVDAVGRVAAL
Trigger: AAGAGCAGCCACTCTGCCCACCGCGTCGACCTGTCAGCCGTGTGAGCCGGGAGGCTGCCAACCAGGCCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR GCA 72 bp CCCACCAAGGCACAGAGGCTGAACATCCCCTCCTGGTaGTGCGGGACCGGCCCCGAGTGTCCTGGCCTCGCT +
Preference number: 3 (lower is better)
Translates to: PTKAQRLNIPSW*CGTGPECPGLA
Trigger: AGCGAGGCCAGGACACTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CAA 90 bp TCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACGGAGCGGCTCGAGCTCGGCTaGGGCAGGGGCCCCCAACTG +
Preference number: 3 (lower is better)
Translates to: SPGQWGLSAGRSHGDQTERLELG*GRGPQL
Trigger: CAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCG...CTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR CCA 72 bp CCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCCGTaGCACTGTCACCATGTGGCAGGTGGCTGGTGCAGC +
Preference number: 3 (lower is better)
Translates to: PEHGCRGHTQGP*HCHHVAGGWCS
Trigger: GCTGCACCAGCCACCTGCCACATGGTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CAA 90 bp CGAATTGGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCCGGCTCGAGCTCGGCTaGGGCAGGGGCCCCCAACTG +
Preference number: 3 (lower is better)
Translates to: RIGVQRGKTHSGWPRSSPRLELG*GRGPQL
Trigger: CAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCG...GGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR TCA 72 bp AGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTaGCCAGACGGAGCGCACTGTGCTACCTGCCGCGTG +
Preference number: 3 (lower is better)
Translates to: RSVGTQRRSVSW*PDGAHCATCRV
Trigger: CACGCGGCAGGTAGCACAGTGCGCTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR CCA 72 bp GACACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTaGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAG +
Preference number: 3 (lower is better)
Translates to: DTAVTSPPSPGQ*GLSAGRSHGDQ
Trigger: CTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CAA 90 bp CCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCAGACACTGGTGGAAGGGCTTCGCGTaGGAGGTGCGGGCAGAGCTG +
Preference number: 3 (lower is better)
Translates to: PRLAPAVGNSPLSGFRHWWKGFA*EVRAEL
Trigger: CAGCTCTGCCCGCACCTCCAACGCGAAGCCCTTCCA...CCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR GCA 72 bp CCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATaGAGGAGAGGCCTGCAGATGAGTGGTCCACTCCAG +
Preference number: 3 (lower is better)
Translates to: PCRHAAPCLPSP*RRGLQMSGPLQ
Trigger: CTGGAGTGGACCACTCATCTGCAGGCCTCTCCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR CCA 72 bp CTTGTCCCAAGGGCTGAGCTTGGTGGAGGCCATGCCTaGCCGGGTCCCATTCATGAGGTCCGAGTGGAAGGG +
Preference number: 3 (lower is better)
Translates to: LVPRAELGGGHA*PGPIHEVRVEG
Trigger: CCCTTCCACTCGGACCTCATGAATGGGACCCGGCCAGGCATGGCCTCCACCAAGCTCAGCCCTTGGGACAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR CAA 90 bp AAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCAGGAGATGACACAGCACAGGTaGGCCCACGCCGGCACCACC +
Preference number: 3 (lower is better)
Translates to: KGSPLQTCCSLPTLPMQEMTQHR*AHAGTT
Trigger: GGTGGTGCCGGCGTGGGCCAACCTGTGCTGTGTCAT...CTCCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CAA 90 bp GGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACAATGACACAGCACAGGTaGGCCCACGCCGGCACCACC +
Preference number: 3 (lower is better)
Translates to: GSKEAKLTADGREAPPSTMTQHR*AHAGTT
Trigger: GGTGGTGCCGGCGTGGGCCAACCTGTGCTGTGTCAT...TGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR TCA 72 bp CATGTGGCAGGTGGCTGGTGCAGCCTGGGCCTCGCCTaGCAGAAGAGCAAAGGTTCACCCCTGCAGACATGC +
Preference number: 3 (lower is better)
Translates to: HVAGGWCSLGLA*QKSKGSPLQTC
Trigger: GCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGCCCAGGCTGCACCAGCCACCTGCCACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR GCA 72 bp TGGGCCTCGCCTGACAGAAGAGCAAAGGTTCACCCCTaGAGACATGCTGCTCCCTGCCTACCCTCCCCATGC +
Preference number: 3 (lower is better)
Translates to: WASPDRRAKVHP*RHAAPCLPSPC
Trigger: GCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR GCA 72 bp GGCTGCAACAGCCGTAACCAGAGGAGTCTGTGCCGGTaGAACTCCGGAACCAGATGTGCGAGGGAGGTTGGG +
Preference number: 3 (lower is better)
Translates to: GCNSRNQRSLCR*NSGTRCAREVG
Trigger: CCCAACCTCCCTCGCACATCTGGTTCCGGAGTTGCACCGGCACAGACTCCTCTGGTTACGGCTGTTGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR CCA 72 bp ACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTaGATTCAGACACTGGGGACTCCGCATGCTCTTCCC +
Preference number: 3 (lower is better)
Translates to: TASAGCGELTTQ*IQTLGTPHALP
Trigger: GGGAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CAA 90 bp GGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACATGGGGCAGAGCCAGGTaGTATCGCAGGCCAGGGAAG +
Preference number: 3 (lower is better)
Translates to: GSKEAKLTADGREAPPSTWGRAR*YRRPGK
Trigger: CTTCCCTGGCCTGCGATACAACCTGGCTCTGCCCCA...TGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR CCA 72 bp GGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTaGCACACGAGGGAGGAGGGCATCTTAAGGCCGAAT +
Preference number: 3 (lower is better)
Translates to: GQLLWPKNNQGG*HTREEGILRPN
Trigger: ATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR GCA 72 bp CAGGTCGGTCTCATGGTGACCAGACGGAGCGCACTGTaGTACCTGCCGCGTGGTCTGCCCATTAGAAACTTC +
Preference number: 3 (lower is better)
Translates to: QVGLMVTRRSAL*YLPRGLPIRNF
Trigger: GAAGTTTCTAATGGGCAGACCACGCGGCAGGTAGCACAGTGCGCTCCGTCTGGTCACCATGAGACCGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR GCA 72 bp TTCAGAGGCTGCAACAGCCGTAACCAGAGGAGTCTGTaGCGGTGCAACTCCGGAACCAGATGTGCGAGGGAG +
Preference number: 3 (lower is better)
Translates to: FRGCNSRNQRSL*RCNSGTRCARE
Trigger: CTCCCTCGCACATCTGGTTCCGGAGTTGCACCGGCACAGACTCCTCTGGTTACGGCTGTTGCAGCCTCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR CCA 72 bp CCTACCCTCCCCATGCAGGAGAGGCCTGCAGATGAGTaGTCCACTCCAGGCGACCAGGGGAAGAGTTACATT +
Preference number: 3 (lower is better)
Translates to: PTLPMQERPADE*STPGDQGKSYI
Trigger: AATGTAACTCTTCCCCTGGTCGCCTGGAGTGGACCACTCATCTGCAGGCCTCTCCTGCATGGGGAGGGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CAA 90 bp CGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCCTCAAGGCCCATCTTAAGGCCGAATaGGGGTCCAAAGAGGCAAAA +
Preference number: 3 (lower is better)
Translates to: RMAEKLPQAQAPSGSLKAHLKAE*GSKEAK
Trigger: TTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATG...GGCCTTGAGGCTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CAA 90 bp AAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGACCTTGGTTTTGTGCTaGAAGGCGGCTCTCACCTTG +
Preference number: 3 (lower is better)
Translates to: KLTADGREAPPSTGTIRQTLVLC*KAALTL
Trigger: CAAGGTGAGAGCCGCCTTCAAGCACAAAACCAAGGT...CTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR GCA 72 bp AAGCGGGGAAGGGATCGTGAGAGCAATTTCAGAGGCTaGAACAGCCGTAACCAGAGGAGTCTGTGCCGGTGC +
Preference number: 3 (lower is better)
Translates to: KRGRDRESNFRG*NSRNQRSLCRC
Trigger: GCACCGGCACAGACTCCTCTGGTTACGGCTGTTGCAGCCTCTGAAATTGCTCTCACGATCCCTTCCCCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR GCA 72 bp GCAGAGCTGCTCGTGAGCGACCAGACCTTGGTTTTGTaGTTGAAGGCGGCTCTCACCTTGAAAGCGGGGAAG +
Preference number: 3 (lower is better)
Translates to: AELLVSDQTLVL*LKAALTLKAGK
Trigger: CTTCCCCGCTTTCAAGGTGAGAGCCGCCTTCAAGCACAAAACCAAGGTCTGGTCGCTCACGAGCAGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR CCA 72 bp TGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTaGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCC +
Preference number: 3 (lower is better)
Translates to: WHTREEGILRPN*GPKRQNSQRMA
Trigger: GGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CAA 90 bp ACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAAAACTCAAAGGCGGCTCTCACCTaGAAAGCGGGGAAGGGATCG +
Preference number: 3 (lower is better)
Translates to: TREEGILRPNWGPKRQNSKAALT*KAGKGS
Trigger: CGATCCCTTCCCCGCTTTCAAGGTGAGAGCCGCCTT...TGAGTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR-3UTR CAA 90 bp CTCACCACTCAGTGGATTCAGACACTGGGGACTCCGCATGCTCTTCCCCACACAGACCAGACCTTGGTTTaGTGCTTGAAGGCGGCTCTC +
Preference number: 3 (lower is better)
Translates to: LTTQWIQTLGTPHALPHTDQTLV*CLKAAL
Trigger: GAGAGCCGCCTTCAAGCACAAAACCAAGGTCTGGTC...TGTGTGGGGAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR TCA 72 bp CGTGGTCTGCCCATTAGAAACTTCGTAGAGTGCCTGTaGGCCATGAGGAAGCCTCTGGGGAAAGCAGTGCCC +
Preference number: 3 (lower is better)
Translates to: RGLPIRNFVECL*AMRKPLGKAVP
Trigger: GGGCACTGCTTTCCCCAGAGGCTTCCTCATGGCTCACAGGCACTCTACGAAGTTTCTAATGGGCAGACCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR-3UTR CAA 90 bp ACACAGAAGACACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGATGTGCGAGGGAGGTaGGGATTTGGAAATATGAGT +
Preference number: 3 (lower is better)
Translates to: TQKTRLSPALPLQVSGDSDVRGR*GFGNMS
Trigger: ACTCATATTTCCAAATCCCAACCTCCCTCGCACATC...TGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTGTCTTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR CCA 72 bp TCCCAAACCTGTGTTCCACAGGATCATGCCCACACATaGGTCCATAACAATTATCCCATCTCCTCTGGGGCT +
Preference number: 3 (lower is better)
Translates to: SQTCVPQDHAHT*VHNNYPISSGA
Trigger: AGCCCCAGAGGAGATGGGATAATTGTTATGGACCCATGTGTGGGCATGATCCTGTGGAACACAGGTTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR TCA 72 bp CAGCCCGTATCTCGGTGGTGTCTTAATTCACATCTATaGTCCCAAACCTGTGTTCCACAGGATCATGCCCAC +
Preference number: 3 (lower is better)
Translates to: QPVSRWCLNSHL*SQTCVPQDHAH
Trigger: GTGGGCATGATCCTGTGGAACACAGGTTTGGGATCATAGATGTGAATTAAGACACCACCGAGATACGGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR TCA 72 bp CATTTCACAGACACCACGAGTGCTATCAGCACAGTATaGACCTCACAGCCCGTATCTCGGTGGTGTCTTAAT +
Preference number: 3 (lower is better)
Translates to: HFTDTTSAISTV*TSQPVSRWCLN
Trigger: ATTAAGACACCACCGAGATACGGGCTGTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR GCA 72 bp TTGAATGTCTTACCCACATTTCACAGACACCACGAGTaGTATCAGCACAGTATGAACCTCACAGCCCGTATC +
Preference number: 3 (lower is better)
Translates to: LNVLPTFHRHHE*YQHSMNLTARI
Trigger: GATACGGGCTGTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAGACATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCAACTGATGACCCAGCTGCCTGCGCCTaGCTGAGGGTGCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: RLPPTARARLGQGPPTDDPAACA*LRVRGD
Trigger: GTCCCCACGCACCCTCAGTCAGGCGCAGGCAGCTGG...GTCATCAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GCAGCAGCCAGGTGTGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCACAGCACGGCGAAGGTaGCCAGCGTGGCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: AAARCARQSTVAGAIRRATARRR*PAWPPG
Trigger: GCCTGGTGGCCACGCTGGTCACCTTCGCCGTGCTGT...GGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCACACCTGGCTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GGCCCACGCCGGCACCACCTACAGAGACACACACCACGGCTAGCGCCGGCTGTGACTGTGACCGCGACCTaGGCCCGGGGACGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GPRRHHLQRHTPRLAPAVTVTAT*ARGREA
Trigger: AGCCTCCCGTCCCCGGGCGCAGGTCGCGGTCACAGT...CACAGCCGGCGCTAGCCGTGGTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR GCA 90 bp CGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCAACTGATGACCAGCCCACGGGTGGATaGAAGGCAGGAGGGCCCACG +
Preference number: 4 (lower is better)
Translates to: RLPPTARARLGQGPPTDDQPTGG*KAGGPT
Trigger: CGTGGGCCCTCCTGCCTTGCATCCACCCGTGGGCTG...GTCATCAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GAGAGTCAACGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCAGGGTGCGTGGGGACCTaGACCACCTCTTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ESQRLPPTARARLGQGPPGCVGT*TTSLAL
Trigger: CAGGGCCAAAGAGGTGGTTCAGGTCCCCACGCACCC...TGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCGTTGACTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGTGTCCTGGCCTCGCTGGGTCGCTTGGTGGAGGCCATaGCTGGCCGGGTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: HPLLVLRDRPRVSWPRWVAWWRP*LAGSHS
Trigger: TGAATGGGACCCGGCCAGGCATGGCCTCCACCAAGC...GACCCAGCGAGGCCAGGACACTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGTGTCCTGGCCTCGCTGGGTCACTGGGGACTCCGCATaGTCTTCCCCACACACCCCC +
Preference number: 4 (lower is better)
Translates to: HPLLVLRDRPRVSWPRWVTGDSA*SSPHTP
Trigger: GGGGGTGTGTGGGGAAGAGCATGCGGAGTCCCCAGT...GACCCAGCGAGGCCAGGACACTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCAACTGATGACCCCCTGCAGACATGCTaGTCCCTGCCTACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RLPPTARARLGQGPPTDDPLQTC*SLPTLP
Trigger: GGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGG...GTCATCAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCAACTGATGACCACTCAGCCCACGGGTaGATGCAAGGCAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RLPPTARARLGQGPPTDDHSAHG*MQGRRA
Trigger: GGCCCTCCTGCCTTGCATCCACCCGTGGGCTGAGTG...GTCATCAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCAACTGATGACCCCTCTCCAGGTCAGTaGGGACTCAGCGCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: RLPPTARARLGQGPPTDDPSPGQ*GLSAGR
Trigger: CCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGG...GTCATCAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGTGTCCTGGCCTCGCTGGGTCGTGGCTGGTGCAGCCTaGGCCTCGCCTGACAGAAGA +
Preference number: 4 (lower is better)
Translates to: HPLLVLRDRPRVSWPRWVVAGAA*ASPDRR
Trigger: TCTTCTGTCAGGCGAGGCCCAGGCTGCACCAGCCAC...GACCCAGCGAGGCCAGGACACTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp TGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCCGTGGCACTGTCACCATGTGGCAGGTGGCTaGTGCAGCCTGGGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: CPPEHGCRGHTQGPWHCHHVAGG*CSLGLA
Trigger: GGCGAGGCCCAGGCTGCACCAGCCACCTGCCACATG...GTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCAACTGATGACAGCAGGCAGTCCTGGTaGTGCATGGCCTCCGCGATC +
Preference number: 4 (lower is better)
Translates to: RLPPTARARLGQGPPTDDSRQSW*CMASAI
Trigger: GATCGCGGAGGCCATGCATCACCAGGACTGCCTGCT...GTCATCAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp CGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCAACTGATGACGGAGAGGCCTGCAGATaGGTGGTCCACTCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: RLPPTARARLGQGPPTDDGEACR*VVHSRR
Trigger: TCGCCTGGAGTGGACCACTCATCTGCAGGCCTCTCC...GTCATCAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGCCCTCCACGGTGACCTaGGGCGTGCTGCCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLPSTVT*GVLPCR
Trigger: CCTGCACGGCAGCACGCCCCAGGTCACCGTGGAGGG...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp CTCCTGTGGCCCAAGAACAACCAAGGAGGCTGGCACACGAGGGAGGAGGGCATCCCCGGCTCACACGGCTaGCAGGTCGACGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LLWPKNNQGGWHTREEGIPGSHG*QVDAVG
Trigger: GCCCACCGCGTCGACCTGTCAGCCGTGTGAGCCGGG...GATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTGGGCCACAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGTGTCCTGGCCTCGCTGGGTCAGCCTGGGCCTCGCCTaGCAGAAGAGCAAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: HPLLVLRDRPRVSWPRWVSLGLA*QKSKGS
Trigger: TGAACCTTTGCTCTTCTGTCAGGCGAGGCCCAGGCT...GACCCAGCGAGGCCAGGACACTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp AGCGCAGGTCGGTCTCATGGTGACCAGACGGAGCGCACTGTGCTACCTGCCGCGAACATCCCCTCCTGGTaGTGCGGGACCGGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: SAGRSHGDQTERTVLPAANIPSW*CGTGPE
Trigger: CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTT...CGCGGCAGGTAGCACAGTGCGCTCCGTCTGGTCACCATGAGACCGACCTGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp ACCAAGGCACAGAGGCTGAACATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGCCACACACCCCCAGCTaGCTGCGCCTGACTGAGGGT +
Preference number: 4 (lower is better)
Translates to: TKAQRLNIPSWCCGTGPEPHTPS*LRLTEG
Trigger: ACCCTCAGTCAGGCGCAGGCAGCTGGGGGTGTGTGG...CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CTGAGGGTGCGTGGGGACCTGAACCACCTCTTTGGCCCTGAGTCCCCAAGCCCCCCGCCAGAGCACGGTTaGAGGGGCCATACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LRVRGDLNHLFGPESPSPPPEHG*RGHTQG
Trigger: GCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGG...GGGGCTTGGGGACTCAGGGCCAAAGAGGTGGTTCAGGTCCCCACGCACCCTCAG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGTGTCCTGGCCTCGCTGGGTCGATGGTCCTGCGATCTaGAGTAGACGCCACGCACCT +
Preference number: 4 (lower is better)
Translates to: HPLLVLRDRPRVSWPRWVDGPAI*SRRHAP
Trigger: AGGTGCGTGGCGTCTACTCCAGATCGCAGGACCATC...GACCCAGCGAGGCCAGGACACTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp CATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGTGTCCTGGCCTCGCTGGGTCCTGTGGAAGGCCTCGTaGGGGATCTGGATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: HPLLVLRDRPRVSWPRWVLWKAS*GIWMKL
Trigger: GAGCTTCATCCAGATCCCCCACGAGGCCTTCCACAG...GACCCAGCGAGGCCAGGACACTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp CACGGTTGCAGGGGCCATACGCAGGGCCCGTGGCACTGTCACCATGTGGCAGGTGCAGCCTGGCCTGGTTaGCAGCCTCCCGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: HGCRGHTQGPWHCHHVAGAAWPG*QPPGSH
Trigger: GTGTGAGCCGGGAGGCTGCCAACCAGGCCAGGCTGC...ACCTGCCACATGGTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTTCTGAGCGCAGCCTaGCCTGGTTGGCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: HGCHQPSLSRSVGTQRRSVLSAA*PGWQPP
Trigger: GGGAGGCTGCCAACCAGGCCAGGCTGCGCTCAGAAC...CGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GGCCCACGCCGGCACCACCTACAGAGACACACACCACGGCTAGCGCCGGCTGTGTGGGCATCAGGCTGCTaGGCTGAGCAGTGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: GPRRHHLQRHTPRLAPAVWASGC*AEQCAP
Trigger: CGGAGCACACTGCTCAGCCCAGCAGCCTGATGCCCA...CACAGCCGGCGCTAGCCGTGGTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp AGCGCAGGTCGGTCTCATGGTGACCAGACGGAGCGCACTGTGCTACCTGCCGCGCATGTGGCAGGTGGCTaGTGCAGCCTGGGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: SAGRSHGDQTERTVLPAAHVAGG*CSLGLA
Trigger: GGCGAGGCCCAGGCTGCACCAGCCACCTGCCACATG...CGCGGCAGGTAGCACAGTGCGCTCCGTCTGGTCACCATGAGACCGACCTGCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GAGAGTCAACGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCAACTGAACAGCGGCCTTaGCCTGCAGCAGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: ESQRLPPTARARLGQGPPTEQRP*PAAARC
Trigger: ACACCTGGCTGCTGCAGGCCAAGGCCGCTGTTCAGT...TGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCGTTGACTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGGAGCCCGACAGGTTCTaGGACAGGGTGGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLEPDRF*DRVGGG
Trigger: CCCACCACCCACCCTGTCTCAGAACCTGTCGGGCTC...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp CATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGTGTCCTGGCCTCGCTGGGTCCCTTGGCTGTCAACTTaGAGGCACTGGGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HPLLVLRDRPRVSWPRWVPWLST*RHWGLH
Trigger: ATGGAGACCCCAGTGCCTTCAAGTTGACAGCCAAGG...GACCCAGCGAGGCCAGGACACTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp AAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCAGGAGCCCGGCTCACACGGCTaGCAGGTCGACGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: KGSPLQTCCSLPTLPMQEPGSHG*QVDAVG
Trigger: GCCCACCGCGTCGACCTGTCAGCCGTGTGAGCCGGG...CTCCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGTCCTCGGGCTTGTCCTaGGGCCGCTCTCGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLSSGLS*GRSRAP
Trigger: AGGAGCTCGAGAGCGGCCGCAGGACAAGCCCGAGGA...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR GCA 90 bp ACCAAGGCACAGAGGCTGAACATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGGCCTGGGCATCAGGCTaGTGGGCTGAGCAGTGTGCT +
Preference number: 4 (lower is better)
Translates to: TKAQRLNIPSWCCGTGPEAWASG*WAEQCA
Trigger: AGCACACTGCTCAGCCCAGCAGCCTGATGCCCAGGC...CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GGCCCACGCCGGCACCACCTACAGAGACACACACCACGGCTAGCGCCGGCTGTGAGACATGCTGCTCCCTaGCTACCCTCCCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: GPRRHHLQRHTPRLAPAVRHAAP*LPSPCR
Trigger: CCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCT...CACAGCCGGCGCTAGCCGTGGTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GAGAGTCAACGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCAGCAAAGGTTCACCCCTaGAGACATGCTGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ESQRLPPTARARLGQGPPAKVHP*RHAAPC
Trigger: GCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGC...TGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCGTTGACTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GCTCACACGGCTGACAGGTCGACGCGGTGGGCAGAGTGGCTGCTCTTGTCCCAACCGCCAGAGCACGGTTaGAGGGGCCATACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: AHTADRSTRWAEWLLLSQPPEHG*RGHTQG
Trigger: GCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGG...TTGGGACAAGAGCAGCCACTCTGCCCACCGCGTCGACCTGTCAGCCGTGTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp ACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTACAGCGGCCTTGGCCTaGAGCAGCCAGGTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: TSPPSPGQWGLSAGRSHGTAALA*SSQVCP
Trigger: CGGGCACACCTGGCTGCTGCAGGCCAAGGCCGCTGT...ACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp ACCAAGGCACAGAGGCTGAACATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGCCTTTTCCACGGACCTaGCCTGCGCCTGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TKAQRLNIPSWCCGTGPEPFPRT*PAPGPA
Trigger: AGCAGGACCAGGCGCAGGGCAGGTCCGTGGAAAAGG...CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CCA 90 bp GAGAGTCAACGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCACTACAAAGGCCCAGATaGCGCCACTCGCCAACGACA +
Preference number: 4 (lower is better)
Translates to: ESQRLPPTARARLGQGPPLQRPR*RHSPTT
Trigger: TGTCGTTGGCGAGTGGCGCCATCTGGGCCTTTGTAG...TGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCGTTGACTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GCTCACACGGCTGACAGGTCGACGCGGTGGGCAGAGTGGCTGCTCTTGTCCCAAGCAGCCTGGCCTGGTTaGCAGCCTCCCGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: AHTADRSTRWAEWLLLSQAAWPG*QPPGSH
Trigger: GTGTGAGCCGGGAGGCTGCCAACCAGGCCAGGCTGC...TTGGGACAAGAGCAGCCACTCTGCCCACCGCGTCGACCTGTCAGCCGTGTGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CCA 90 bp CGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCCTCAAGGCCGTTCTGAGCGCAGCCTaGCCTGGTTGGCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RMAEKLPQAQAPSGSLKAVLSAA*PGWQPP
Trigger: GGGAGGCTGCCAACCAGGCCAGGCTGCGCTCAGAAC...GGCCTTGAGGCTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCCTCAAGGCCGGGGTCGCCCTCACCTaGAGAGTCAACGACTCCCGC +
Preference number: 4 (lower is better)
Translates to: RMAEKLPQAQAPSGSLKAGVALT*RVNDSR
Trigger: GCGGGAGTCGTTGACTCTCCAGGTGAGGGCGACCCC...GGCCTTGAGGCTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR CAA 72 bp AGAGTCAACGACTCCCGCCCACGGCTCGAGCTCGGCTaGGGCAGGGGCCCCCAACTGATGACACAGCACAGG +
Preference number: 4 (lower is better)
Translates to: RVNDSRPRLELG*GRGPQLMTQHR
Trigger: CCTGTGCTGTGTCATCAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCGTTGACTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GCCTCGCCTGACAGAAGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCAGGAGCCCTCCACGGTaGCCTGGGGCGTGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: ASPDRRAKVHPCRHAAPCRSPPR*PGACCR
Trigger: ACGGCAGCACGCCCCAGGTCACCGTGGAGGGCTCCT...GCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGCCACCTCTTTGGCCCTaGGTCCCCAAGCCCCACCAA +
Preference number: 4 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLPPLWP*VPKPHQ
Trigger: TTGGTGGGGCTTGGGGACTCAGGGCCAAAGAGGTGG...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp ACACAGAAGACACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCACCAGCTGCCTGCGCCTaGCTGAGGGTGCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: TQKTRLSPALPLQVSGDSPAACA*LRVRGD
Trigger: GTCCCCACGCACCCTCAGTCAGGCGCAGGCAGCTGG...TGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTGTCTTCTGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCAACTGATGACTTCGTAGAGTGCCTGTaGGCCATGAGGAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RLPPTARARLGQGPPTDDFVECL*AMRKPL
Trigger: CAGAGGCTTCCTCATGGCTCACAGGCACTCTACGAA...GTCATCAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GAGACACACACCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCCTGGAGCGCCCGCCTaGTCCTCGGGCTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: ETHTTASAGCGELTTQWIPGAPA*SSGLSC
Trigger: GCAGGACAAGCCCGAGGAGCAGGCGGGCGCTCCAGG...AATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGGTGTGTGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR GCA 90 bp GCAGCAGCCAGGTGTGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCGGGCATCACGGGGCTTaGTGTGGATGTCATGAAGAG +
Preference number: 4 (lower is better)
Translates to: AAARCARQSTVAGAIRRAGHHGA*CGCHEE
Trigger: CTCTTCATGACATCCACAGCAAGCCCCGTGATGCCC...GGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCACACCTGGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR GCA 90 bp GCTCACACGGCTGACAGGTCGACGCGGTGGGCAGAGTGGCTGCTCTTGTCCCAACACCTGGTGTCCGCGTaGAAGCTCCAGCGGGACCAC +
Preference number: 4 (lower is better)
Translates to: AHTADRSTRWAEWLLLSQHLVSA*KLQRDH
Trigger: GTGGTCCCGCTGGAGCTTGCACGCGGACACCAGGTG...TTGGGACAAGAGCAGCCACTCTGCCCACCGCGTCGACCTGTCAGCCGTGTGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp CGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCCTCAAGGCCGCTGGTTCCGGATGGTaGTCACGGAGGACAGCACGG +
Preference number: 4 (lower is better)
Translates to: RMAEKLPQAQAPSGSLKAAGSGW*SRRTAR
Trigger: CCGTGCTGTCCTCCGTGAGCACCATCCGGAACCAGC...GGCCTTGAGGCTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACAGCCCACGGGTGGATaGAAGGCAGGAGGGCCCACG +
Preference number: 4 (lower is better)
Translates to: LPLQVSGDSAQVGLMVTRQPTGG*KAGGPT
Trigger: CGTGGGCCCTCCTGCCTTGCATCCACCCGTGGGCTG...TCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCCTCAAGGCCACTGGGGACTCCGCATaGTCTTCCCCACACACCCCC +
Preference number: 4 (lower is better)
Translates to: RMAEKLPQAQAPSGSLKATGDSA*SSPHTP
Trigger: GGGGGTGTGTGGGGAAGAGCATGCGGAGTCCCCAGT...GGCCTTGAGGCTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp ACCAAGGCACAGAGGCTGAACATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGGCGCACTGTGCTACCTaGCGCGTGGTCTGCCCATTA +
Preference number: 4 (lower is better)
Translates to: TKAQRLNIPSWCCGTGPEAHCAT*RVVCPL
Trigger: TAATGGGCAGACCACGCGGCAGGTAGCACAGTGCGC...CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp ACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTCCCCTGCAGACATGCTaGTCCCTGCCTACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: TSPPSPGQWGLSAGRSHGPLQTC*SLPTLP
Trigger: GGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGG...ACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGTGTCCTGGCCTCGCTGGGTCGCAGCAGCTTTTCCATaGCTCTCTCGGAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: HPLLVLRDRPRVSWPRWVAAAFP*LSRRSK
Trigger: CTTTGACCTCCGAGAGAGCCATGGAAAAGCTGCTGC...GACCCAGCGAGGCCAGGACACTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp AGCGCAGGTCGGTCTCATGGTGACCAGACGGAGCGCACTGTGCTACCTGCCGCGGCCTCGTGGGGGATCTaGATGAAGCTCTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: SAGRSHGDQTERTVLPAAASWGI*MKLCPW
Trigger: CCACGGGCAGAGCTTCATCCAGATCCCCCACGAGGC...CGCGGCAGGTAGCACAGTGCGCTCCGTCTGGTCACCATGAGACCGACCTGCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp GGCCCACGCCGGCACCACCTACAGAGACACACACCACGGCTAGCGCCGGCTGTGTCCAGGGAAATCAGGTaGCTGGTGGCGAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: GPRRHHLQRHTPRLAPAVSREIR*LVANSR
Trigger: CCTGCTGTTCGCCACCAGCCACCTGATTTCCCTGGA...CACAGCCGGCGCTAGCCGTGGTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp ACCAAGGCACAGAGGCTGAACATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGAGCGCTGGTTCCGGATaGTGCTCACGGAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: TKAQRLNIPSWCCGTGPESAGSG*CSRRTA
Trigger: TGCTGTCCTCCGTGAGCACCATCCGGAACCAGCGCT...CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGCGGCGAAGGACAGGTTaGCGTGGATGTGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: HGCHQPSLSRSVGTQRRSRRRTG*RGCGSA
Trigger: AGCGCTACCACATCCACGCCAACCTGTCCTTCGCCG...CGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCCTCAAGGCCATGAGCAGCAGGACCTaGGCCACCAGCACGGCGAAG +
Preference number: 4 (lower is better)
Translates to: RMAEKLPQAQAPSGSLKAMSSRT*ATSTAK
Trigger: CTTCGCCGTGCTGGTGGCCCAGGTCCTGCTGCTCAT...GGCCTTGAGGCTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGGACAGGTCGACGCGGTaGGCAGAGTGGCTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLDRSTR*AEWLLL
Trigger: CAAGAGCAGCCACTCTGCCCACCGCGTCGACCTGTC...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCAGACACTGGCAGGAGGGCCCACGCTaGCCTGGGCATCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PRLAPAVGNSPLSGFRHWQEGPR*PGHQAA
Trigger: AGCAGCCTGATGCCCAGGCCAGCGTGGGCCCTCCTG...CCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CTGAGGGTGCGTGGGGACCTGAACCACCTCTTTGGCCCTGAGTCCCCAAGCCCCCCTCCACTTTCCACCTaGACACCAGGCACTGCGGGG +
Preference number: 4 (lower is better)
Translates to: LRVRGDLNHLFGPESPSPPPLST*TPGTAG
Trigger: CCCCGCAGTGCCTGGTGTCCAGGTGGAAAGTGGAGG...GGGGCTTGGGGACTCAGGGCCAAAGAGGTGGTTCAGGTCCCCACGCACCCTCAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CACGGTTGCAGGGGCCATACGCAGGGCCCGTGGCACTGTCACCATGTGGCAGGTGTGGCTGGTGCAGCCTaGGCCTCGCCTGACAGAAGA +
Preference number: 4 (lower is better)
Translates to: HGCRGHTQGPWHCHHVAGVAGAA*ASPDRR
Trigger: TCTTCTGTCAGGCGAGGCCCAGGCTGCACCAGCCAC...ACCTGCCACATGGTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CTCCTGTGGCCCAAGAACAACCAAGGAGGCTGGCACACGAGGGAGGAGGGCATCCATGTGGCAGGTGGCTaGTGCAGCCTGGGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: LLWPKNNQGGWHTREEGIHVAGG*CSLGLA
Trigger: GGCGAGGCCCAGGCTGCACCAGCCACCTGCCACATG...GATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTGGGCCACAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCCTCAAGGCCTCACCATGTGGCAGGTaGCTGGTGCAGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RMAEKLPQAQAPSGSLKASPCGR*LVQPGP
Trigger: AGGCCCAGGCTGCACCAGCCACCTGCCACATGGTGA...GGCCTTGAGGCTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp ACCAAGGCACAGAGGCTGAACATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGCATACGCAGGGCCCGTaGCACTGTCACCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: TKAQRLNIPSWCCGTGPEHTQGP*HCHHVA
Trigger: TGCCACATGGTGACAGTGCCACGGGCCCTGCGTATG...CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp TCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACGGAGGCGGGCGGGCTTCCATaGCTGCACTGCCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SPGQWGLSAGRSHGDQTEAGGLP*LHCLPA
Trigger: GGCAGGAAGGCAGTGCAGCCATGGAAGCCCGCCCGC...CTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR CAA 72 bp GCTGACAGGTCGACGCGGTGGGCAGAGTGGCTGCTCTaGTCCCAAGGGCTGAGCTTGGTGGAGGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: ADRSTRWAEWLL*SQGLSLVEAMP
Trigger: AGGCATGGCCTCCACCAAGCTCAGCCCTTGGGACAAGAGCAGCCACTCTGCCCACCGCGTCGACCTGTCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR TCA 90 bp ACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTCCCCTTCTCCGGAGCTaGAGTCCAGGAAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: TSPPSPGQWGLSAGRSHGPLLRS*SPGRRS
Trigger: ACTGCGCCTTCCTGGACTTCAGCTCCGGAGAAGGGG...ACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GGAGGCTGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGACAGCACGGCGAAGGTaGCCAGCGTGGCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: GGWHTREEGILRPNWGPKTARRR*PAWPPG
Trigger: GCCTGGTGGCCACGCTGGTCACCTTCGCCGTGCTGT...CTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR TCA 90 bp TGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCCGTGGCACTGTCACCCACAGCACAACCGTTaGCAGCAAGCACGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: CPPEHGCRGHTQGPWHCHPQHNR*QQARQR
Trigger: TCTTTGGCGTGCTTGCTGTCAACGGTTGTGCTGTGG...GTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp ACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTATCAGGCTGCTGGGCTaGGCAGTGTGCTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: TSPPSPGQWGLSAGRSHGIRLLG*AVCSDS
Trigger: GCTGTCGGAGCACACTGCTCAGCCCAGCAGCCTGAT...ACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CTCCTGTGGCCCAAGAACAACCAAGGAGGCTGGCACACGAGGGAGGAGGGCATCGCAGACCCACGACGGTaGTCCAGGCGTGCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LLWPKNNQGGWHTREEGIADPRR*SRRACG
Trigger: TCCACAGGCACGCCTGGAGCACCGTCGTGGGTCTGC...GATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTGGGCCACAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR GCA 90 bp GCAGCAGCCAGGTGTGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCCAGACCTTGGTTTTGTaGTTGAAGGCGGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: AAARCARQSTVAGAIRRAQTLVL*LKAALT
Trigger: GGTGAGAGCCGCCTTCAAGCACAAAACCAAGGTCTG...GGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCACACCTGGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GCTCAAGGGCACCATCACAGTCAGGCCACTGTGTCCTGGGAATCCCCCGAGGAAAACATCCCCTCCTGGTaGTGCGGGACCGGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: AQGHHHSQATVSWESPEENIPSW*CGTGPE
Trigger: CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTT...TTCCTCGGGGGATTCCCAGGACACAGTGGCCTGACTGTGATGGTGCCCTTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp TCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACGGAGCCACACACCCCCAGCTaGCTGCGCCTGACTGAGGGT +
Preference number: 4 (lower is better)
Translates to: SPGQWGLSAGRSHGDQTEPHTPS*LRLTEG
Trigger: ACCCTCAGTCAGGCGCAGGCAGCTGGGGGTGTGTGG...CTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCCTCAAGGCCTGCCTACCCTCCCCATaGAGGAGAGGCCTGCAGATG +
Preference number: 4 (lower is better)
Translates to: RMAEKLPQAQAPSGSLKACLPSP*RRGLQM
Trigger: CATCTGCAGGCCTCTCCTGCATGGGGAGGGTAGGCA...GGCCTTGAGGCTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CTCCTGTGGCCCAAGAACAACCAAGGAGGCTGGCACACGAGGGAGGAGGGCATCCCCCTGCAGACATGCTaGTCCCTGCCTACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LLWPKNNQGGWHTREEGIPLQTC*SLPTLP
Trigger: GGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGG...GATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTGGGCCACAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp AGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCACAGCGGCCTTGGCCTaGAGCAGCCAGGTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: RAKVHPCRHAAPCLPSPCTAALA*SSQVCP
Trigger: CGGGCACACCTGGCTGCTGCAGGCCAAGGCCGCTGT...GCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GGCCCACGCCGGCACCACCTACAGAGACACACACCACGGCTAGCGCCGGCTGTGGGTTGCTGCTGTTGGTaGCCTCACTGTGCTGCTTAC +
Preference number: 4 (lower is better)
Translates to: GPRRHHLQRHTPRLAPAVGCCCW*PHCAAY
Trigger: GTAAGCAGCACAGTGAGGCCACCAACAGCAGCAACC...CACAGCCGGCGCTAGCCGTGGTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GAGACACACACCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTAGCACGGCCATCACTTaGCAGGGGGTCGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: ETHTTASAGCGELTTQWISTAIT*QGVVPG
Trigger: GCCGGGCACGACCCCCTGCCAAGTGATGGCCGTGCT...AATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGGTGTGTGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GAGACACACACCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCAGGAGGGCCCACGCTaGCCTGGGCATCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ETHTTASAGCGELTTQWIQEGPR*PGHQAA
Trigger: AGCAGCCTGATGCCCAGGCCAGCGTGGGCCCTCCTG...AATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGGTGTGTGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGCTGACTGAGGGTGCGTaGGGACCTGAACCACCTCTT +
Preference number: 4 (lower is better)
Translates to: HGCHQPSLSRSVGTQRRSLTEGA*GPEPPL
Trigger: AAGAGGTGGTTCAGGTCCCCACGCACCCTCAGTCAG...CGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCAGACACTGGGGGGTCGCCCTCACCTaGAGAGTCAACGACTCCCGC +
Preference number: 4 (lower is better)
Translates to: PRLAPAVGNSPLSGFRHWGVALT*RVNDSR
Trigger: GCGGGAGTCGTTGACTCTCCAGGTGAGGGCGACCCC...CCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp TCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACGGAGGGGGTCGCCCTCACCTaGAGAGTCAACGACTCCCGC +
Preference number: 4 (lower is better)
Translates to: SPGQWGLSAGRSHGDQTEGVALT*RVNDSR
Trigger: GCGGGAGTCGTTGACTCTCCAGGTGAGGGCGACCCC...CTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACCCTCTCCAGGTCAGTaGGGACTCAGCGCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: LPLQVSGDSAQVGLMVTRPSPGQ*GLSAGR
Trigger: CCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGG...TCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR CAA 72 bp TTGGGCAGGGGCCCCCAACTGATGACACAGCACAGGTaGGCCCACGCCGGCACCACCTACAGAGACACACAC +
Preference number: 4 (lower is better)
Translates to: LGRGPQLMTQHR*AHAGTTYRDTH
Trigger: GTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCCAACCTGTGCTGTGTCATCAGTTGGGGGCCCCTGCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR CAA 72 bp GTCCCATTCATGAGGTCCGAGTGGAAGGGCTTCGCGTaGGAGGTGCGGGCAGAGCTGCTCGTGAGCGACCAG +
Preference number: 4 (lower is better)
Translates to: VPFMRSEWKGFA*EVRAELLVSDQ
Trigger: CTGGTCGCTCACGAGCAGCTCTGCCCGCACCTCCAACGCGAAGCCCTTCCACTCGGACCTCATGAATGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR TCA 90 bp ACAACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCGTGGGGGATCTGGATaGAGCTCTGCCCGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: TTPMSRQQQGEGPWAKVGRGGSG*SSARGP
Trigger: CGGCCCACGGGCAGAGCTTCATCCAGATCCCCCACG...CCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp CTCCTGTGGCCCAAGAACAACCAAGGAGGCTGGCACACGAGGGAGGAGGGCATCCCCCTTCTCCGGAGCTaGAGTCCAGGAAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: LLWPKNNQGGWHTREEGIPLLRS*SPGRRS
Trigger: ACTGCGCCTTCCTGGACTTCAGCTCCGGAGAAGGGG...GATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTGGGCCACAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp ACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTAGGTCGGTCTCATGGTaGCCAGACGGAGCGCACTGT +
Preference number: 4 (lower is better)
Translates to: TSPPSPGQWGLSAGRSHGRSVSW*PDGAHC
Trigger: ACAGTGCGCTCCGTCTGGTCACCATGAGACCGACCT...ACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GCAGCAGCCAGGTGTGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCAGTAGTAACGGTGCTTaGTGTCCTCCGACCCAAAGA +
Preference number: 4 (lower is better)
Translates to: AAARCARQSTVAGAIRRASSNGA*CPPTQR
Trigger: TCTTTGGGTCGGAGGACAGCAAGCACCGTTACTACT...GGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCACACCTGGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR GCA 90 bp ACCAAGGCACAGAGGCTGAACATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGCAGCAGCACGGCCACTaGCTTGGCTGTCAACTTGAA +
Preference number: 4 (lower is better)
Translates to: TKAQRLNIPSWCCGTGPEQQHGH*LGCQLE
Trigger: TTCAAGTTGACAGCCAAGGCAGTGGCCGTGCTGCTG...CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp AACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCACAGCCCACGGGTGGATaGAAGGCAGGAGGGCCCACG +
Preference number: 4 (lower is better)
Translates to: NTHVQTAARRGSMGKGGAQPTGG*KAGGPT
Trigger: CGTGGGCCCTCCTGCCTTGCATCCACCCGTGGGCTG...TGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp TCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACGGAGAGCCACCAGGTGGGCTaGAAAAGGGCCACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SPGQWGLSAGRSHGDQTESHQVG*KRATGS
Trigger: GGAGCCTGTGGCCCTTTTGCAGCCCACCTGGTGGCT...CTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CGAATTGGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCACAGCGGCCTTGGCCTaGAGCAGCCAGGTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: RIGVQRGKTHSGWPRSSPTAALA*SSQVCP
Trigger: CGGGCACACCTGGCTGCTGCAGGCCAAGGCCGCTGT...GGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACAAGGACCCAAGGGGTaGCCAGGGAGGCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LPLQVSGDSAQVGLMVTRQGPKG*PGRLFP
Trigger: TGGGAAGAGCCTCCCTGGGCACCCCTTGGGTCCTTG...TCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp GAGAGTCAACGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCAAAGCAAATAAACAAATaGGTGGTGGGCAGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: ESQRLPPTARARLGQGPPKQINK*VVGRQA
Trigger: CGCCTGCCTGCCCACCACGCATTTGTTTATTTGCTT...TGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCGTTGACTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CCA 90 bp CTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGAAGTCCAATAGGGGCCTaGGGGGCTGAAGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LPLQVSGDSAQVGLMVTRSPIGA*GAEGGL
Trigger: GAGGCCTCCTTCAGCCCCCCAGGCCCCTATTGGACT...TCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp CTGAGGGTGCGTGGGGACCTGAACCACCTCTTTGGCCCTGAGTCCCCAAGCCCCGATGGTAGGCATCTGTaGGCATCACGGGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LRVRGDLNHLFGPESPSPDGRHL*ASRGLL
Trigger: CAGCAAGCCCCGTGATGCCCACAGATGCCTACCATC...GGGGCTTGGGGACTCAGGGCCAAAGAGGTGGTTCAGGTCCCCACGCACCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp GAGAGTCAACGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCATCTTGGGCAGGATTTTaGCCACGGAAAACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ESQRLPPTARARLGQGPPSWAGF*PRKTLP
Trigger: TGGCAGAGTTTTCCGTGGCCAAAATCCTGCCCAAGA...TGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCGTTGACTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp CCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCAGACACTGGTGGCCTCCGCGATCTTaGTGTGGGCGGGCCAGATGT +
Preference number: 4 (lower is better)
Translates to: PRLAPAVGNSPLSGFRHWWPPRS*CGRARC
Trigger: ACATCTGGCCCGCCCACACCAAGATCGCGGAGGCCA...CCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp ACACAGAAGACACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGGAAGGGCTTCGCGTTaGAGGTGCGGGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TQKTRLSPALPLQVSGDSGRASR*RCGQSC
Trigger: GCAGCTCTGCCCGCACCTCCAACGCGAAGCCCTTCC...TGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTGTCTTCTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GAGACACACACCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTGTTCTGAGCGCAGCCTaGCCTGGTTGGCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: ETHTTASAGCGELTTQWIVLSAA*PGWQPP
Trigger: GGGAGGCTGCCAACCAGGCCAGGCTGCGCTCAGAAC...AATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGGTGTGTGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp TCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACGGAGTGGGCATCAGGCTGCTaGGCTGAGCAGTGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: SPGQWGLSAGRSHGDQTEWASGC*AEQCAP
Trigger: CGGAGCACACTGCTCAGCCCAGCAGCCTGATGCCCA...CTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GCTCAAGGGCACCATCACAGTCAGGCCACTGTGTCCTGGGAATCCCCCGAGGAACACTCAGCCCACGGGTaGATGCAAGGCAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: AQGHHHSQATVSWESPEEHSAHG*MQGRRA
Trigger: GGCCCTCCTGCCTTGCATCCACCCGTGGGCTGAGTG...TTCCTCGGGGGATTCCCAGGACACAGTGGCCTGACTGTGATGGTGCCCTTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp AGCGCAGGTCGGTCTCATGGTGACCAGACGGAGCGCACTGTGCTACCTGCCGCGCTGACTGAGGGTGCGTaGGGACCTGAACCACCTCTT +
Preference number: 4 (lower is better)
Translates to: SAGRSHGDQTERTVLPAALTEGA*GPEPPL
Trigger: AAGAGGTGGTTCAGGTCCCCACGCACCCTCAGTCAG...CGCGGCAGGTAGCACAGTGCGCTCCGTCTGGTCACCATGAGACCGACCTGCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCAGACACTGGCCTCCACTTTCCACCTaGACACCAGGCACTGCGGGG +
Preference number: 4 (lower is better)
Translates to: PRLAPAVGNSPLSGFRHWPPLST*TPGTAG
Trigger: CCCCGCAGTGCCTGGTGTCCAGGTGGAAAGTGGAGG...CCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp AAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCCCTCTCCAGGTCAGTaGGGACTCAGCGCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: KLTADGREAPPSTGTIRQPSPGQ*GLSAGR
Trigger: CCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGG...CTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCCTCAAGGCCTGGAGTGGCCTCTGCTaGGCTCCTCACACTCAGCAA +
Preference number: 4 (lower is better)
Translates to: RMAEKLPQAQAPSGSLKAWSGLC*APHTQQ
Trigger: TTGCTGAGTGTGAGGAGCCCAGCAGAGGCCACTCCA...GGCCTTGAGGCTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR TCA 90 bp AAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCAGGAGCCCCTTCTCCGGAGCTaGAGTCCAGGAAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: KGSPLQTCCSLPTLPMQEPLLRS*SPGRRS
Trigger: ACTGCGCCTTCCTGGACTTCAGCTCCGGAGAAGGGG...CTCCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GGCCCACGCCGGCACCACCTACAGAGACACACACCACGGCTAGCGCCGGCTGTGGGCGGCTCTCACCTCTaGATTCAGGAGACAATGAAA +
Preference number: 4 (lower is better)
Translates to: GPRRHHLQRHTPRLAPAVGGSHL*IQETMK
Trigger: TTTCATTGTCTCCTGAATTCAGAGGTGAGAGCCGCC...CACAGCCGGCGCTAGCCGTGGTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000335486.10
CDS-3UTR TCA 90 bp GCTCAAGGGCACCATCACAGTCAGGCCACTGTGTCCTGGGAATCCCCCGAGGAAATCAGGCTGCTGGGCTaGGCAGTGTGCTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: AQGHHHSQATVSWESPEEIRLLG*AVCSDS
Trigger: GCTGTCGGAGCACACTGCTCAGCCCAGCAGCCTGAT...TTCCTCGGGGGATTCCCAGGACACAGTGGCCTGACTGTGATGGTGCCCTTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GGCCCACGCCGGCACCACCTACAGAGACACACACCACGGCTAGCGCCGGCTGTGGCTATCAGCACAGTATaGACCTCACAGCCCGTATCT +
Preference number: 4 (lower is better)
Translates to: GPRRHHLQRHTPRLAPAVAISTV*TSQPVS
Trigger: AGATACGGGCTGTGAGGTTCATACTGTGCTGATAGC...CACAGCCGGCGCTAGCCGTGGTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCCTCAAGGCCGGGGTGTGGAGGGGCTaGATGAAATCATGGTCACAG +
Preference number: 4 (lower is better)
Translates to: RMAEKLPQAQAPSGSLKAGVWRG*MKSWSQ
Trigger: CTGTGACCATGATTTCATTCAGCCCCTCCACACCCC...GGCCTTGAGGCTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp ACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGGTCACTGGGCTTTGTaGTCATGCAGCCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TSPPSPGQWGLSAGRSHGGHWAL*SCSPSA
Trigger: GGCAGAAGGGCTGCATGATCACAAAGCCCAGTGACC...ACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp AGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCGCTGGTTCCGGATGGTaGTCACGGAGGACAGCACGG +
Preference number: 4 (lower is better)
Translates to: RAKVHPCRHAAPCLPSPCAGSGW*SRRTAR
Trigger: CCGTGCTGTCCTCCGTGAGCACCATCCGGAACCAGC...GCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR GCA 90 bp ACCAAGGCACAGAGGCTGAACATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGCTCCACCAGCATCCATaGGAAGGCACTCAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: TKAQRLNIPSWCCGTGPELHQHP*EGTQEE
Trigger: TTCTTCCTGAGTGCCTTCGCATGGATGCTGGTGGAG...CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR GCA 90 bp ACCAAGGCACAGAGGCTGAACATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGCAGACCTTGGTTTTGTaGTTGAAGGCGGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: TKAQRLNIPSWCCGTGPEQTLVL*LKAALT
Trigger: GGTGAGAGCCGCCTTCAAGCACAAAACCAAGGTCTG...CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CTGATGACACAGCACAGGTTGGCCCACGCCGGCACCACCTACAGAGACACACACGCCTGGGCATCAGGCTaGTGGGCTGAGCAGTGTGCT +
Preference number: 4 (lower is better)
Translates to: LMTQHRLAHAGTTYRDTHAWASG*WAEQCA
Trigger: AGCACACTGCTCAGCCCAGCAGCCTGATGCCCAGGC...GTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCCAACCTGTGCTGTGTCATCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GCCTCGCCTGACAGAAGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCACTGGGGACTCCGCATaGTCTTCCCCACACACCCCC +
Preference number: 4 (lower is better)
Translates to: ASPDRRAKVHPCRHAAPCTGDSA*SSPHTP
Trigger: GGGGGTGTGTGGGGAAGAGCATGCGGAGTCCCCAGT...GCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp AAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGAGCCACCAGGTGGGCTaGAAAAGGGCCACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: KLTADGREAPPSTGTIRQSHQVG*KRATGS
Trigger: GGAGCCTGTGGCCCTTTTGCAGCCCACCTGGTGGCT...CTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACTTCCATGGCTGCACTaGCTTCCTGCCACCGGGATC +
Preference number: 4 (lower is better)
Translates to: LPLQVSGDSAQVGLMVTRLPWLH*LPATGI
Trigger: GATCCCGGTGGCAGGAAGGCAGTGCAGCCATGGAAG...TCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp TCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACGGAGGTGTGGAGTGGCCTCTaGTGGGCTCCTCACACTCAG +
Preference number: 4 (lower is better)
Translates to: SPGQWGLSAGRSHGDQTEVWSGL*WAPHTQ
Trigger: CTGAGTGTGAGGAGCCCAGCAGAGGCCACTCCACAC...CTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CCA 90 bp ACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTTCCGCGATCTTGGTGTaGGCGGGCCAGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: TSPPSPGQWGLSAGRSHGSAILV*AGQMLF
Trigger: GAACAACATCTGGCCCGCCCACACCAAGATCGCGGA...ACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp AGAGGAGTCTGTGCCGGTGCAACTCCGGAACCAGATGTGCGAGGGAGGTTGGGAATGAGCAGCAGGACCTaGGCCACCAGCACGGCGAAG +
Preference number: 4 (lower is better)
Translates to: RGVCAGATPEPDVRGRLGMSSRT*ATSTAK
Trigger: CTTCGCCGTGCTGGTGGCCCAGGTCCTGCTGCTCAT...TCCCAACCTCCCTCGCACATCTGGTTCCGGAGTTGCACCGGCACAGACTCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CCA 90 bp TGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAACAGGAGGGCCCACGCTaGCCTGGGCATCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: WHTREEGILRPNWGPKRQQEGPR*PGHQAA
Trigger: AGCAGCCTGATGCCCAGGCCAGCGTGGGCCCTCCTG...TTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp TGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCCGTGGCACTGTCACGAACTCACCACTCAGTaGATTCAGACACTGGGGACT +
Preference number: 4 (lower is better)
Translates to: CPPEHGCRGHTQGPWHCHELTTQ*IQTLGT
Trigger: AGTCCCCAGTGTCTGAATCCACTGAGTGGTGAGTTC...GTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGTGTCCTGGCCTCGCTGGGTCGATCATGCCCACACATaGGTCCATAACAATTATCCC +
Preference number: 4 (lower is better)
Translates to: HPLLVLRDRPRVSWPRWVDHAHT*VHNNYP
Trigger: GGGATAATTGTTATGGACCCATGTGTGGGCATGATC...GACCCAGCGAGGCCAGGACACTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCAGACACTGGAGGCCTGCAGATGAGTaGTCCACTCCAGGCGACCAG +
Preference number: 4 (lower is better)
Translates to: PRLAPAVGNSPLSGFRHWRPADE*STPGDQ
Trigger: CTGGTCGCCTGGAGTGGACCACTCATCTGCAGGCCT...CCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp AAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCAGGAGGTGGCTGGTGCAGCCTaGGCCTCGCCTGACAGAAGA +
Preference number: 4 (lower is better)
Translates to: KGSPLQTCCSLPTLPMQEVAGAA*ASPDRR
Trigger: TCTTCTGTCAGGCGAGGCCCAGGCTGCACCAGCCAC...CTCCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGTTGCTGTGGATGTCATaGAGAGGCTTGGCAGCGTTG +
Preference number: 4 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLLLWMS*RGLAAL
Trigger: CAACGCTGCCAAGCCTCTTCATGACATCCACAGCAA...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp GGAGGCTGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGCACGGCGCTGTCCTCTaGCAGAGCAATCCAACCAGG +
Preference number: 4 (lower is better)
Translates to: GGWHTREEGILRPNWGPKHGAVL*QSNPTR
Trigger: CCTGGTTGGATTGCTCTGTCAGAGGACAGCGCCGTG...CTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp CTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGAGGATGGCAAAGTTGGTaGGGTGAGTGCAGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: LPLQVSGDSAQVGLMVTRGWQSW*GECSGR
Trigger: TCTGCCGCTGCACTCACCTCACCAACTTTGCCATCC...TCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp ATGAGGATCTGGCACTGTGGTCCATGTGACCTGGTTTCTGGGGTCACGGGAGCCATCAGGCTGCTGGGCTaGGCAGTGTGCTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: MRIWHCGPCDLVSGVTGAIRLLG*AVCSDS
Trigger: GCTGTCGGAGCACACTGCTCAGCCCAGCAGCCTGAT...GGCTCCCGTGACCCCAGAAACCAGGTCACATGGACCACAGTGCCAGATCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GAGACACACACCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCCAAGGCACAGAGGCTaGACATCCCCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ETHTTASAGCGELTTQWIPRHRG*TSPPGA
Trigger: AGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGG...AATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGGTGTGTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CTCACCACTCAGTGGATTCAGACACTGGGGACTCCGCATGCTCTTCCCCACACAGGGTGCGTGGGGACCTaGACCACCTCTTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LTTQWIQTLGTPHALPHTGCVGT*TTSLAL
Trigger: CAGGGCCAAAGAGGTGGTTCAGGTCCCCACGCACCC...TGTGTGGGGAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp AGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCAGGTCGGTCTCATGGTaGCCAGACGGAGCGCACTGT +
Preference number: 4 (lower is better)
Translates to: RAKVHPCRHAAPCLPSPCRSVSW*PDGAHC
Trigger: ACAGTGCGCTCCGTCTGGTCACCATGAGACCGACCT...GCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp ACAACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGGGAGAGGCCTGCAGATaGGTGGTCCACTCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: TTPMSRQQQGEGPWAKVGGEACR*VVHSRR
Trigger: TCGCCTGGAGTGGACCACTCATCTGCAGGCCTCTCC...CCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTTGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGGGCCCACCTGGCCTCTaGATTCAGGAGACAATGAAA +
Preference number: 4 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLGPPGL*IQETMK
Trigger: TTTCATTGTCTCCTGAATTCAGAGGCCAGGTGGGCC...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR TCA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGTGGGATTTGGAAATATaGGTCGGAGCTGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLWDLEI*VGAAGS
Trigger: GGAGCCAGCAGCTCCGACTCATATTTCCAAATCCCA...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR TCA 90 bp TCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACGGAGGCGGGGAAGGGATCGTaGGAGCAATTTCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SPGQWGLSAGRSHGDQTEAGKGS*EQFQRL
Trigger: CAGCCTCTGAAATTGCTCTCACGATCCCTTCCCCGC...CTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp ACACAGAAGACACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCATTCACACCTCCGTCCTaGTCTCTGGGTGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: TQKTRLSPALPLQVSGDSFTPPS*SLGGGG
Trigger: TCCCCCTCCACCCAGAGAGCAGGACGGAGGTGTGAA...TGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTGTCTTCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR GCA 90 bp TGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAAACGGTGCTCCAGGCGTaGCTGTGGAAGGCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: WHTREEGILRPNWGPKRQTVLQA*LWKASW
Trigger: CCACGAGGCCTTCCACAGGCACGCCTGGAGCACCGT...TTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR GCA 90 bp CGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCCTCAAGGCCCTCCACCAGCATCCATaGGAAGGCACTCAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: RMAEKLPQAQAPSGSLKALHQHP*EGTQEE
Trigger: TTCTTCCTGAGTGCCTTCGCATGGATGCTGGTGGAG...GGCCTTGAGGCTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR GCA 90 bp AACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCAGCTTGGTGGAGGCCATaGCTGGCCGGGTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: NTHVQTAARRGSMGKGGAAWWRP*LAGSHS
Trigger: TGAATGGGACCCGGCCAGGCATGGCCTCCACCAAGC...TGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CAAGAACAACCAAGGAGGCTGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAACCACACACCCCCAGCTaGCTGCGCCTGACTGAGGGT +
Preference number: 4 (lower is better)
Translates to: QEQPRRLAHEGGGHLKAEPHTPS*LRLTEG
Trigger: ACCCTCAGTCAGGCGCAGGCAGCTGGGGGTGTGTGG...TTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GCCTCGCCTGACAGAAGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCGCGCACTGTGCTACCTaGCGCGTGGTCTGCCCATTA +
Preference number: 4 (lower is better)
Translates to: ASPDRRAKVHPCRHAAPCAHCAT*RVVCPL
Trigger: TAATGGGCAGACCACGCGGCAGGTAGCACAGTGCGC...GCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp ACAACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGAGCCACCAGGTGGGCTaGAAAAGGGCCACAGGCTCC +
Preference number: 4 (lower is better)
Translates to: TTPMSRQQQGEGPWAKVGSHQVG*KRATGS
Trigger: GGAGCCTGTGGCCCTTTTGCAGCCCACCTGGTGGCT...CCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp ACACAGAAGACACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAAGACATGCTGCTCCCTaGCTACCCTCCCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: TQKTRLSPALPLQVSGDSRHAAP*LPSPCR
Trigger: CCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCT...TGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTGTCTTCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CTGATGACACAGCACAGGTTGGCCCACGCCGGCACCACCTACAGAGACACACACTCACCCCTGCAGACATaGTGCTCCCTGCCTACCCTC +
Preference number: 4 (lower is better)
Translates to: LMTQHRLAHAGTTYRDTHSPLQT*CSLPTL
Trigger: GAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGA...GTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCCAACCTGTGCTGTGTCATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCAGACACTGGGCAAAGGTTCACCCCTaGAGACATGCTGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PRLAPAVGNSPLSGFRHWAKVHP*RHAAPC
Trigger: GCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGC...CCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCATTTCATTCTGTTTGGGGGGCCCGGCCACCATCCTaGTCAGCGACTCTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AARRGSMGKGGAFHSVWGARPPS*SATLLC
Trigger: GCAGAGCAGAGTCGCTGAGCAGGATGGTGGCCGGGC...CCCCCAAACAGAATGAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp TCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACGGAGATCCACCTCAGGCCTTaGAAGGGGTCACTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: SPGQWGLSAGRSHGDQTEIHLRP*KGSLGV
Trigger: AACGCCCAGTGACCCCTTGCAAGGCCTGAGGTGGAT...CTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp ACACAGAAGACACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCATCCACAGCTGAGCTGTaGATCGCTGCTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TQKTRLSPALPLQVSGDSSTAEL*IAALWG
Trigger: GCCCCACAGAGCAGCGATGCACAGCTCAGCTGTGGA...TGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTGTCTTCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CCA 90 bp TGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAAGGAAGGGCTTCGCGTTaGAGGTGCGGGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: WHTREEGILRPNWGPKRQGRASR*RCGQSC
Trigger: GCAGCTCTGCCCGCACCTCCAACGCGAAGCCCTTCC...TTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp ATGAGGATCTGGCACTGTGGTCCATGTGACCTGGTTTCTGGGGTCACGGGAGCCTGGGCATCAGGCTGCTaGGCTGAGCAGTGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: MRIWHCGPCDLVSGVTGAWASGC*AEQCAP
Trigger: CGGAGCACACTGCTCAGCCCAGCAGCCTGATGCCCA...GGCTCCCGTGACCCCAGAAACCAGGTCACATGGACCACAGTGCCAGATCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CAAGAACAACCAAGGAGGCTGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAACACTCAGCCCACGGGTaGATGCAAGGCAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: QEQPRRLAHEGGGHLKAEHSAHG*MQGRRA
Trigger: GGCCCTCCTGCCTTGCATCCACCCGTGGGCTGAGTG...TTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp AACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCACCTCCACTTTCCACCTaGACACCAGGCACTGCGGGG +
Preference number: 4 (lower is better)
Translates to: NTHVQTAARRGSMGKGGAPPLST*TPGTAG
Trigger: CCCCGCAGTGCCTGGTGTCCAGGTGGAAAGTGGAGG...TGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGGGGAAAGCAGTGCCCTaGAAAATGCCCTCCACTTTC +
Preference number: 4 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLGKAVP*KMPSTF
Trigger: GAAAGTGGAGGGCATTTTCCAGGGCACTGCTTTCCC...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp ACAACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGTCACCATGTGGCAGGTaGCTGGTGCAGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TTPMSRQQQGEGPWAKVGSPCGR*LVQPGP
Trigger: AGGCCCAGGCTGCACCAGCCACCTGCCACATGGTGA...CCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GAGACACACACCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCATACGCAGGGCCCGTaGCACTGTCACCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: ETHTTASAGCGELTTQWIHTQGP*HCHHVA
Trigger: TGCCACATGGTGACAGTGCCACGGGCCCTGCGTATG...AATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGGTGTGTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GAGACACACACCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTACTGAACAGCGGCCTTaGCCTGCAGCAGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: ETHTTASAGCGELTTQWITEQRP*PAAARC
Trigger: ACACCTGGCTGCTGCAGGCCAAGGCCGCTGTTCAGT...AATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGGTGTGTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp AAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGACTGAACAGCGGCCTTaGCCTGCAGCAGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: KLTADGREAPPSTGTIRQTEQRP*PAAARC
Trigger: ACACCTGGCTGCTGCAGGCCAAGGCCGCTGTTCAGT...CTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
3UTR CAA 72 bp CGGGCAGAGCTGCTCGTGAGCGACCAGACCTTGGTTTaGTGCTTGAAGGCGGCTCTCACCTTGAAAGCGGGG +
Preference number: 4 (lower is better)
Translates to: RAELLVSDQTLV*CLKAALTLKAG
Trigger: CCCCGCTTTCAAGGTGAGAGCCGCCTTCAAGCACAAAACCAAGGTCTGGTCGCTCACGAGCAGCTCTGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR TCA 90 bp TGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCCGTGGCACTGTCACCGTAATAGAGAAGCGTaGCTCCCTTTTCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: CPPEHGCRGHTQGPWHCHRNREA*LPFPLS
Trigger: TGAAAGAGGAAAAGGGAGTCACGCTTCTCTATTACG...GTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp AAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCAGGAGGTCGGCGCTGATCTGTaGGATGACTCTGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: KGSPLQTCCSLPTLPMQEVGADL*DDSGHS
Trigger: GCTGTGACCAGAGTCATCTCACAGATCAGCGCCGAC...CTCCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CTGATGACACAGCACAGGTTGGCCCACGCCGGCACCACCTACAGAGACACACACGTCGGCGCTGATCTGTaGGATGACTCTGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: LMTQHRLAHAGTTYRDTHVGADL*DDSGHS
Trigger: GCTGTGACCAGAGTCATCTCACAGATCAGCGCCGAC...GTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCCAACCTGTGCTGTGTCATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACCTTGGCTGTCAACTTaGAGGCACTGGGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LPLQVSGDSAQVGLMVTRPWLST*RHWGLH
Trigger: ATGGAGACCCCAGTGCCTTCAAGTTGACAGCCAAGG...TCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CTCCTGTGGCCCAAGAACAACCAAGGAGGCTGGCACACGAGGGAGGAGGGCATCGTCCCTGCAGGGAGTTaGGCGTGGCAAACATGTACT +
Preference number: 4 (lower is better)
Translates to: LLWPKNNQGGWHTREEGIVPAGS*AWQTCT
Trigger: AGTACATGTTTGCCACGCTCAACTCCCTGCAGGGAC...GATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTGGGCCACAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCAGACACTGGGTCCCTGCAGGGAGTTaGGCGTGGCAAACATGTACT +
Preference number: 4 (lower is better)
Translates to: PRLAPAVGNSPLSGFRHWVPAGS*AWQTCT
Trigger: AGTACATGTTTGCCACGCTCAACTCCCTGCAGGGAC...CCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CGAATTGGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCCCAAGGCACAGAGGCTaGACATCCCCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RIGVQRGKTHSGWPRSSPPRHRG*TSPPGA
Trigger: AGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGG...GGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp TGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAACCACCTCTTTGGCCCTaGGTCCCCAAGCCCCACCAA +
Preference number: 4 (lower is better)
Translates to: WHTREEGILRPNWGPKRQPPLWP*VPKPHQ
Trigger: TTGGTGGGGCTTGGGGACTCAGGGCCAAAGAGGTGG...TTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GAGACACACACCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCCTTCAGGGCCACACTaGTCTGGCTTGCTGATGCAG +
Preference number: 4 (lower is better)
Translates to: ETHTTASAGCGELTTQWIPSGPH*SGLLMQ
Trigger: CTGCATCAGCAAGCCAGAGCAGTGTGGCCCTGAAGG...AATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGGTGTGTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR GCA 90 bp ACACAGAAGACACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCACACTTGGCCTGGTCCTaGTCAGACCCTATCACGAGG +
Preference number: 4 (lower is better)
Translates to: TQKTRLSPALPLQVSGDSHLAWS*SDPITR
Trigger: CCTCGTGATAGGGTCTGAGCAGGACCAGGCCAAGTG...TGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTGTCTTCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR GCA 90 bp TTTCTGGGGTCACGGGAGCCTGGGGCAGTGGCTAAACATGGGACTTTAGTCCATCACCTGGTGTCCGCGTaGAAGCTCCAGCGGGACCAC +
Preference number: 4 (lower is better)
Translates to: FLGSREPGAVAKHGTLVHHLVSA*KLQRDH
Trigger: GTGGTCCCGCTGGAGCTTGCACGCGGACACCAGGTG...ATGGACTAAAGTCCCATGTTTAGCCACTGCCCCAGGCTCCCGTGACCCCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GTGGGGAACTCACCACTCAGTGGATTCAGACACTGGGGACTCCGCATGCTCTTCAGACGGAGCGCACTGTaGTACCTGCCGCGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VGNSPLSGFRHWGLRMLFRRSAL*YLPRGL
Trigger: CAGACCACGCGGCAGGTAGCACAGTGCGCTCCGTCT...GAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp AACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCAAGACATGCTGCTCCCTaGCTACCCTCCCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: NTHVQTAARRGSMGKGGARHAAP*LPSPCR
Trigger: CCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCT...TGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp ACAACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGTCACCCCTGCAGACATaGTGCTCCCTGCCTACCCTC +
Preference number: 4 (lower is better)
Translates to: TTPMSRQQQGEGPWAKVGSPLQT*CSLPTL
Trigger: GAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGA...CCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GCCTCGCCTGACAGAAGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCGCAAAGGTTCACCCCTaGAGACATGCTGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ASPDRRAKVHPCRHAAPCAKVHP*RHAAPC
Trigger: GCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGC...GCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp ACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAAAACTCACCGCCAGAGCACGGTTaGAGGGGCCATACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TREEGILRPNWGPKRQNSPPEHG*RGHTQG
Trigger: GCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGG...TGAGTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CTCACCACTCAGTGGATTCAGACACTGGGGACTCCGCATGCTCTTCCCCACACACCTGCTCAGCGACTCTaGTCTGCCCTCCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LTTQWIQTLGTPHALPHTPAQRL*SALLGP
Trigger: TGGGCCAAGGAGGGCAGAGCAGAGTCGCTGAGCAGG...TGTGTGGGGAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CCA 90 bp ACCAAGGCACAGAGGCTGAACATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGATCCACATTCTCCAGTaGCCAGTAATGGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: TKAQRLNIPSWCCGTGPEIHILQ*PVMGSR
Trigger: TCTGCTTCCCATTACTGGCCACTGGAGAATGTGGAT...CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp CGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCAACTGATGACATCACTCCGGGACTTTaGAAGGTTTTTCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RLPPTARARLGQGPPTDDITPGL*KVFLSS
Trigger: AGAAGAGAGAAAAACCTTCCAAAGTCCCGGAGTGAT...GTCATCAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp TTTCTGGGGTCACGGGAGCCTGGGGCAGTGGCTAAACATGGGACTTTAGTCCATCTCCAGGCGTGCCTGTaGAAGGCCTCGTGGGGGATC +
Preference number: 4 (lower is better)
Translates to: FLGSREPGAVAKHGTLVHLQACL*KASWGI
Trigger: GATCCCCCACGAGGCCTTCCACAGGCACGCCTGGAG...ATGGACTAAAGTCCCATGTTTAGCCACTGCCCCAGGCTCCCGTGACCCCAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp GCCTCGCCTGACAGAAGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCGGGAAATCAGGTGGCTaGTGGCGAACAGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: ASPDRRAKVHPCRHAAPCGKSGG*WRTAGS
Trigger: ACTGCCTGCTGTTCGCCACCAGCCACCTGATTTCCC...GCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp CCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCAGACACTGGGGTTGCTGCTGTTGGTaGCCTCACTGTGCTGCTTAC +
Preference number: 4 (lower is better)
Translates to: PRLAPAVGNSPLSGFRHWGCCCW*PHCAAY
Trigger: GTAAGCAGCACAGTGAGGCCACCAACAGCAGCAACC...CCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp TTTCTGGGGTCACGGGAGCCTGGGGCAGTGGCTAAACATGGGACTTTAGTCCATGACGACAGCGCCACCTaGTGTCCGCGTGCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: FLGSREPGAVAKHGTLVHDDSAT*CPRASS
Trigger: GGAGCTTGCACGCGGACACCAGGTGGCGCTGTCGTC...ATGGACTAAAGTCCCATGTTTAGCCACTGCCCCAGGCTCCCGTGACCCCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR CCA 90 bp ACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAAAACTCAAGCACGGCCATCACTTaGCAGGGGGTCGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: TREEGILRPNWGPKRQNSSTAIT*QGVVPG
Trigger: GCCGGGCACGACCCCCTGCCAAGTGATGGCCGTGCT...TGAGTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR CCA 90 bp AAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCTACAAAGGCCCAGATaGCGCCACTCGCCAACGACA +
Preference number: 4 (lower is better)
Translates to: KLTADGREAPPSTGTIRQLQRPR*RHSPTT
Trigger: TGTCGTTGGCGAGTGGCGCCATCTGGGCCTTTGTAG...CTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CTCCTGTGGCCCAAGAACAACCAAGGAGGCTGGCACACGAGGGAGGAGGGCATCCAAGGAGAGGGTCCATaGGCAAAGGTGGGGCATTTC +
Preference number: 4 (lower is better)
Translates to: LLWPKNNQGGWHTREEGIQGEGP*AKVGHF
Trigger: GAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTG...GATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTGGGCCACAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGGAACTCACCACTCAGTaGATTCAGACACTGGGGACT +
Preference number: 4 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLELTTQ*IQTLGT
Trigger: AGTCCCCAGTGTCTGAATCCACTGAGTGGTGAGTTC...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp TGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCCGTGGCACTGTCACATCTTAAGGCCGAATTaGGGTCCAAAGAGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: CPPEHGCRGHTQGPWHCHILRPN*GPKRQN
Trigger: GTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGAT...GTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp ATGAGGATCTGGCACTGTGGTCCATGTGACCTGGTTTCTGGGGTCACGGGAGCCCATACGCAGGGCCCGTaGCACTGTCACCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: MRIWHCGPCDLVSGVTGAHTQGP*HCHHVA
Trigger: TGCCACATGGTGACAGTGCCACGGGCCCTGCGTATG...GGCTCCCGTGACCCCAGAAACCAGGTCACATGGACCACAGTGCCAGATCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CTGATGACACAGCACAGGTTGGCCCACGCCGGCACCACCTACAGAGACACACACCTTGCAAGGGGTCACTaGGCGTTGCGATCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LMTQHRLAHAGTTYRDTHLARGH*ALRSRG
Trigger: ACCCCTTGATCGCAACGCCCAGTGACCCCTTGCAAG...GTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCCAACCTGTGCTGTGTCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR TCA 90 bp CCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACAGAAGACCCAGGTCACCACTGTaGCCGCGACCTGCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PISSGAESESINFPQHRRPRSPL*PRPAPG
Trigger: CCCGGGCGCAGGTCGCGGTCACAGTGGTGACCTGGG...TCTTCTGTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGATAAACACGTTGCGATaGCCAGAGCAGCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLINTLR*PEQLWN
Trigger: ATTCCACAGCTGCTCTGGTCATCGCAACGTGTTTAT...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp CGAATTGGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCGCAGACGCCAACACCTaGAATCCTGGATGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: RIGVQRGKTHSGWPRSSPADANT*NPGWSC
Trigger: GCAGGACCATCCAGGATTTCAGGTGTTGGCGTCTGC...GGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp AGAGGAGTCTGTGCCGGTGCAACTCCGGAACCAGATGTGCGAGGGAGGTTGGGACCACAGCACAACCGTTaGCAGCAAGCACGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: RGVCAGATPEPDVRGRLGPQHNR*QQARQR
Trigger: TCTTTGGCGTGCTTGCTGTCAACGGTTGTGCTGTGG...TCCCAACCTCCCTCGCACATCTGGTTCCGGAGTTGCACCGGCACAGACTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR TCA 90 bp ACCAAGGCACAGAGGCTGAACATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGAATGAAAGAGGAATATaGACAGTCCCTGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: TKAQRLNIPSWCCGTGPENERGI*TVPAGS
Trigger: ACTCCCTGCAGGGACTGTTCATATTCCTCTTTCATT...CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CTATCAGCACAGTATGAACCTCACAGCCCGTATCTCGGTGGTGTCTTAATTCACCCCGGCTCACACGGCTaGCAGGTCGACGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LSAQYEPHSPYLGGVLIHPGSHG*QVDAVG
Trigger: GCCCACCGCGTCGACCTGTCAGCCGTGTGAGCCGGG...GTGAATTAAGACACCACCGAGATACGGGCTGTGAGGTTCATACTGTGCTGATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp AAGGGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTCCAGCTGCCTGCGCCTaGCTGAGGGTGCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: KGHRLHRKLTLKQGRHRGPAACA*LRVRGD
Trigger: GTCCCCACGCACCCTCAGTCAGGCGCAGGCAGCTGG...ACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp AGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCTTCGTAGAGTGCCTGTaGGCCATGAGGAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RAKVHPCRHAAPCLPSPCFVECL*AMRKPL
Trigger: CAGAGGCTTCCTCATGGCTCACAGGCACTCTACGAA...GCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp TGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAAAGGTCGGTCTCATGGTaGCCAGACGGAGCGCACTGT +
Preference number: 4 (lower is better)
Translates to: WHTREEGILRPNWGPKRQRSVSW*PDGAHC
Trigger: ACAGTGCGCTCCGTCTGGTCACCATGAGACCGACCT...TTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp AGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCGGGGTGTGGAGGGGCTaGATGAAATCATGGTCACAG +
Preference number: 4 (lower is better)
Translates to: RAKVHPCRHAAPCLPSPCGVWRG*MKSWSQ
Trigger: CTGTGACCATGATTTCATTCAGCCCCTCCACACCCC...GCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp ACAACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGAGCCTGGGCCTCGCCTaGCAGAAGAGCAAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: TTPMSRQQQGEGPWAKVGSLGLA*QKSKGS
Trigger: TGAACCTTTGCTCTTCTGTCAGGCGAGGCCCAGGCT...CCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GCTCAAGGGCACCATCACAGTCAGGCCACTGTGTCCTGGGAATCCCCCGAGGAACCTCACACTCAGCAATaGATGTCCCGGGGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: AQGHHHSQATVSWESPEEPHTQQ*MSRGEC
Trigger: ACACTCACCCCGGGACATTCATTGCTGAGTGTGAGG...TTCCTCGGGGGATTCCCAGGACACAGTGGCCTGACTGTGATGGTGCCCTTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR TCA 90 bp AGAGCTGCTCGTGAGCGACCAGACCTTGGTTTTGTGCTTGAAGGCGGCTCTCACAGGCGGCTCTCACCTTaGAAGCGGGGAAGGGATCGT +
Preference number: 4 (lower is better)
Translates to: RAARERPDLGFVLEGGSHRRLSP*KRGRDR
Trigger: ACGATCCCTTCCCCGCTTTCAAGGTGAGAGCCGCCT...GTGAGAGCCGCCTTCAAGCACAAAACCAAGGTCTGGTCGCTCACGAGCAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp GTGGGGAACTCACCACTCAGTGGATTCAGACACTGGGGACTCCGCATGCTCTTCTGGGGCGTGCTGCCGTaGAGGTTGGAGGATACATGG +
Preference number: 4 (lower is better)
Translates to: VGNSPLSGFRHWGLRMLFWGVLP*RLEDTW
Trigger: CCATGTATCCTCCAACCTGCACGGCAGCACGCCCCA...GAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR GCA 90 bp GTGGGGAACTCACCACTCAGTGGATTCAGACACTGGGGACTCCGCATGCTCTTCGGCCACGGAAAACTCTaGCATGGCAGAGGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: VGNSPLSGFRHWGLRMLFGHGKL*HGRGAL
Trigger: GAGGGCTCCTCTGCCATGGCAGAGTTTTCCGTGGCC...GAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR GCA 90 bp AGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCCGAAGACTCGGTTGCTaGTGTTGGTGGCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: RAKVHPCRHAAPCLPSPCRRLGC*CWWPHC
Trigger: ACAGTGAGGCCACCAACAGCAGCAACCGAGTCTTCG...GCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GAGACACACACCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTACACGAAGACTCGGTTaGTGCTGTTGGTGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: ETHTTASAGCGELTTQWITRRLG*CCWWPH
Trigger: GTGAGGCCACCAACAGCAGCAACCGAGTCTTCGTGT...AATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGGTGTGTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGACAGCCAGCAATTGTTaGTTGTTCCGTAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: HGCHQPSLSRSVGTQRRSTASNC*LFRNCP
Trigger: TGGACAGTTACGGAACAAGCAACAATTGCTGGCTGT...CGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR GCA 90 bp ACACAGAAGACACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCACTCTGGGGAAAGCAGTaGCCTGGAAAATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: TQKTRLSPALPLQVSGDSLWGKQ*PGKCPP
Trigger: TGGAGGGCATTTTCCAGGGCACTGCTTTCCCCAGAG...TGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTGTCTTCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CAAGAACAACCAAGGAGGCTGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATGCCTACCCTCCCCATaGAGGAGAGGCCTGCAGATG +
Preference number: 4 (lower is better)
Translates to: QEQPRRLAHEGGGHLKAECLPSP*RRGLQM
Trigger: CATCTGCAGGCCTCTCCTGCATGGGGAGGGTAGGCA...TTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCATTTCATTCTGTTTGGGGGTCACCCCTGCAGACATaGTGCTCCCTGCCTACCCTC +
Preference number: 4 (lower is better)
Translates to: AARRGSMGKGGAFHSVWGSPLQT*CSLPTL
Trigger: GAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGA...CCCCCAAACAGAATGAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CGAATTGGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCGTGGCCTCACTGTGCTaGTTACGTGTCCGACTCTCC +
Preference number: 4 (lower is better)
Translates to: RIGVQRGKTHSGWPRSSPVASLC*LRVRLS
Trigger: GGAGAGTCGGACACGTAAGCAGCACAGTGAGGCCAC...GGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GCTCAAGGGCACCATCACAGTCAGGCCACTGTGTCCTGGGAATCCCCCGAGGAATTGGTGGCCTCACTGTaGTGCTTACGTGTCCGACTC +
Preference number: 4 (lower is better)
Translates to: AQGHHHSQATVSWESPEELVASL*CLRVRL
Trigger: GAGTCGGACACGTAAGCAGCACAGTGAGGCCACCAA...TTCCTCGGGGGATTCCCAGGACACAGTGGCCTGACTGTGATGGTGCCCTTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp ACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGTGAAGTCATTCAATTaGTCAGCCCTTGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TSPPSPGQWGLSAGRSHGVKSFN*SALASC
Trigger: GCAGCTGGCAAGGGCTGAGCAATTGAATGACTTCAC...ACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp CGAATTGGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCAACCAGAGGAGTCTGTaGCGGTGCAACTCCGGAACC +
Preference number: 4 (lower is better)
Translates to: RIGVQRGKTHSGWPRSSPNQRSL*RCNSGT
Trigger: GGTTCCGGAGTTGCACCGGCACAGACTCCTCTGGTT...GGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CCA 90 bp GGAGGCTGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGGAGCTCCTTCTGGTCTaGCTCAAGTTCACACCTCCG +
Preference number: 4 (lower is better)
Translates to: GGWHTREEGILRPNWGPKELLLV*LKFTPP
Trigger: CGGAGGTGTGAACTTGAGCCAGACCAGAAGGAGCTC...CTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp CTGATGACACAGCACAGGTTGGCCCACGCCGGCACCACCTACAGAGACACACACGGTTGCTGCTGTTGGTaGCCTCACTGTGCTGCTTAC +
Preference number: 4 (lower is better)
Translates to: LMTQHRLAHAGTTYRDTHGCCCW*PHCAAY
Trigger: GTAAGCAGCACAGTGAGGCCACCAACAGCAGCAACC...GTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCCAACCTGTGCTGTGTCATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCATTTCATTCTGTTTGGGGGGTGAGCGCACAGCCGTaGTTCGACCAGACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: AARRGSMGKGGAFHSVWGVSAQP*FDQTPS
Trigger: AGAAGGGGTCTGGTCGAACCACGGCTGTGCGCTCAC...CCCCCAAACAGAATGAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CTCACCACTCAGTGGATTCAGACACTGGGGACTCCGCATGCTCTTCCCCACACACGGCGAAGGACAGGTTaGCGTGGATGTGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: LTTQWIQTLGTPHALPHTRRRTG*RGCGSA
Trigger: AGCGCTACCACATCCACGCCAACCTGTCCTTCGCCG...TGTGTGGGGAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR CCA 90 bp ACACAGAAGACACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAAAAACTCACAGCGGATaGCCGAGAAGCTCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: TQKTRLSPALPLQVSGDSKTHSG*PRSSPK
Trigger: CTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTT...TGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTGTCTTCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GGAGGCTGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGGGCGTGATGAGGATCTaGCACTGTGGTCCATGTGAC +
Preference number: 4 (lower is better)
Translates to: GGWHTREEGILRPNWGPKGVMRI*HCGPCD
Trigger: GTCACATGGACCACAGTGCCAGATCCTCATCACGCC...CTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CAAGAACAACCAAGGAGGCTGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAAGTCGGCGCTGATCTGTaGGATGACTCTGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: QEQPRRLAHEGGGHLKAEVGADL*DDSGHS
Trigger: GCTGTGACCAGAGTCATCTCACAGATCAGCGCCGAC...TTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp ACAACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCCTTGGCTGTCAACTTaGAGGCACTGGGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: TTPMSRQQQGEGPWAKVGPWLST*RHWGLH
Trigger: ATGGAGACCCCAGTGCCTTCAAGTTGACAGCCAAGG...CCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CTGAGGGTGCGTGGGGACCTGAACCACCTCTTTGGCCCTGAGTCCCCAAGCCCCAATGAAAGAGGAATATaGACAGTCCCTGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: LRVRGDLNHLFGPESPSPNERGI*TVPAGS
Trigger: ACTCCCTGCAGGGACTGTTCATATTCCTCTTTCATT...GGGGCTTGGGGACTCAGGGCCAAAGAGGTGGTTCAGGTCCCCACGCACCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGTGGGGTGCGTGGGGACCTaGACCACCTCTTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GHRLHRKLTLKQGRHRGVGCVGT*TTSLAL
Trigger: CAGGGCCAAAGAGGTGGTTCAGGTCCCCACGCACCC...CACACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp AACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCATTCGTAGAGTGCCTGTaGGCCATGAGGAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: NTHVQTAARRGSMGKGGAFVECL*AMRKPL
Trigger: CAGAGGCTTCCTCATGGCTCACAGGCACTCTACGAA...TGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp AACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCACGAAGACTCGGTTGCTaGTGTTGGTGGCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: NTHVQTAARRGSMGKGGARRLGC*CWWPHC
Trigger: ACAGTGAGGCCACCAACAGCAGCAACCGAGTCTTCG...TGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp ACAACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCGAAGACTCGGTTGCTaGTGTTGGTGGCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: TTPMSRQQQGEGPWAKVGRRLGC*CWWPHC
Trigger: ACAGTGAGGCCACCAACAGCAGCAACCGAGTCTTCG...CCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp AAGGGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTAACATCCCCTCCTGGTaGTGCGGGACCGGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: KGHRLHRKLTLKQGRHRGNIPSW*CGTGPE
Trigger: CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTT...ACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp AAGAAGCCACCAGGTGGGCTGCAAAAGGGCCACAGGCTCCATAGAAAACTCACTAGACGGAGCGCACTGTaGTACCTGCCGCGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: KKPPGGLQKGHRLHRKLTRRSAL*YLPRGL
Trigger: CAGACCACGCGGCAGGTAGCACAGTGCGCTCCGTCT...AGTGAGTTTTCTATGGAGCCTGTGGCCCTTTTGCAGCCCACCTGGTGGCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp ACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTCACAGACACCACGAGTaGTATCAGCACAGTATGAAC +
Preference number: 4 (lower is better)
Translates to: TSPPSPGQWGLSAGRSHGHRHHE*YQHSMN
Trigger: GTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTG...ACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCATTTCATTCTGTTTGGGGGCTCCAGGACGTCCCGTaGAGACACTCCATGACCACA +
Preference number: 4 (lower is better)
Translates to: AARRGSMGKGGAFHSVWGLQDVP*RHSMTT
Trigger: TGTGGTCATGGAGTGTCTGCACGGGACGTCCTGGAG...CCCCCAAACAGAATGAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp ACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAAAACTCATCAGCGACTCTGCTCTaGCCTCCTTGGCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: TREEGILRPNWGPKRQNSSATLL*PPWPTW
Trigger: CCAGGTGGGCCAAGGAGGGCAGAGCAGAGTCGCTGA...TGAGTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp ACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAAAACTCAGGGGTCACTGGGCGTTaGGATCAAGGGGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: TREEGILRPNWGPKRQNSGVTGR*DQGVTG
Trigger: CCCAGTGACCCCTTGATCGCAACGCCCAGTGACCCC...TGAGTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CCA 90 bp GCCTCGCCTGACAGAAGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCGTTCTCATAACACTTaGCCTGGTCCTGCTCAGACC +
Preference number: 4 (lower is better)
Translates to: ASPDRRAKVHPCRHAAPCRSHNT*PGPAQT
Trigger: GGTCTGAGCAGGACCAGGCCAAGTGTTATGAGAACG...GCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp AGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCAGGAATTCACGGTCTTaGGCAGGATTTTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: RAKVHPCRHAAPCLPSPCRNSRS*AGFWPR
Trigger: CCGTGGCCAAAATCCTGCCCAAGACCGTGAATTCCT...GCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp CGAATTGGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCTTCATGAGGTCCGAGTaGAAGGGCTTCGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: RIGVQRGKTHSGWPRSSPFMRSE*KGFALE
Trigger: CTCCAACGCGAAGCCCTTCCACTCGGACCTCATGAA...GGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp ACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAAAACTCAGACAGGTCGACGCGGTaGGCAGAGTGGCTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: TREEGILRPNWGPKRQNSDRSTR*AEWLLL
Trigger: CAAGAGCAGCCACTCTGCCCACCGCGTCGACCTGTC...TGAGTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp AAGGGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGCAGCCTGGCCTGGTTaGCAGCCTCCCGGCTCACAC +
Preference number: 4 (lower is better)
Translates to: KGHRLHRKLTLKQGRHRGAAWPG*QPPGSH
Trigger: GTGTGAGCCGGGAGGCTGCCAACCAGGCCAGGCTGC...ACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GGAGGCTGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGTGGATTCAGACACTaGGGACTCCGCATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GGWHTREEGILRPNWGPKSGFRH*GLRMLF
Trigger: GAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACT...CTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp AGAGGAGTCTGTGCCGGTGCAACTCCGGAACCAGATGTGCGAGGGAGGTTGGGAAGTGGATTCAGACACTaGGGACTCCGCATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: RGVCAGATPEPDVRGRLGSGFRH*GLRMLF
Trigger: GAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACT...TCCCAACCTCCCTCGCACATCTGGTTCCGGAGTTGCACCGGCACAGACTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CCA 90 bp CGAATTGGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAAACTCACAGCGGATaGCCGAGAAGCTCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: RIGVQRGKTHSGWPRSSPKTHSG*PRSSPK
Trigger: CTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTT...GGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GAGACACACACCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTGGGAAAGCAGTGCCCTaGAAAATGCCCTCCACTTTC +
Preference number: 4 (lower is better)
Translates to: ETHTTASAGCGELTTQWIGKAVP*KMPSTF
Trigger: GAAAGTGGAGGGCATTTTCCAGGGCACTGCTTTCCC...AATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGGTGTGTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCATTTCATTCTGTTTGGGGGCCTCCTTGGCCCACCTaGCCTCTGAATTCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: AARRGSMGKGGAFHSVWGPPWPT*PLNSGD
Trigger: GTCTCCTGAATTCAGAGGCCAGGTGGGCCAAGGAGG...CCCCCAAACAGAATGAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR CAA 72 bp GCCGGTGCAACTCCGGAACCAGATGTGCGAGGGAGGTaGGGATTTGGAAATATGAGTCGGAGCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AGATPEPDVRGR*GFGNMSRSCWL
Trigger: GAGCCAGCAGCTCCGACTCATATTTCCAAATCCCAACCTCCCTCGCACATCTGGTTCCGGAGTTGCACCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
3UTR CAA 72 bp GAGCTGCTCGTGAGCGACCAGACCTTGGTTTTGTGCTaGAAGGCGGCTCTCACCTTGAAAGCGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: ELLVSDQTLVLC*KAALTLKAGKG
Trigger: TCCCTTCCCCGCTTTCAAGGTGAGAGCCGCCTTCAAGCACAAAACCAAGGTCTGGTCGCTCACGAGCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR TCA 90 bp CGAATTGGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCATTCCTGAGGGTCTGTaGGAACGGGACCTCTTAACC +
Preference number: 4 (lower is better)
Translates to: RIGVQRGKTHSGWPRSSPIPEGL*ERDLLT
Trigger: GGTTAAGAGGTCCCGTTCTCACAGACCCTCAGGAAT...GGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp ACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTTTAAGAAGGTCTTGGTaGGATTCAAGGCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: TSPPSPGQWGLSAGRSHGLRRSW*DSRLSA
Trigger: AGCAGACAGCCTTGAATCTCACCAAGACCTTCTTAA...ACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp TGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAAGTCCCTGCAGGGAGTTaGGCGTGGCAAACATGTACT +
Preference number: 4 (lower is better)
Translates to: WHTREEGILRPNWGPKRQVPAGS*AWQTCT
Trigger: AGTACATGTTTGCCACGCTCAACTCCCTGCAGGGAC...TTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CTGATGACACAGCACAGGTTGGCCCACGCCGGCACCACCTACAGAGACACACACGGCGGCTCTCACCTCTaGATTCAGGAGACAATGAAA +
Preference number: 4 (lower is better)
Translates to: LMTQHRLAHAGTTYRDTHGGSHL*IQETMK
Trigger: TTTCATTGTCTCCTGAATTCAGAGGTGAGAGCCGCC...GTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCCAACCTGTGCTGTGTCATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000335486.10
CDS-3UTR TCA 90 bp CTCACCACTCAGTGGATTCAGACACTGGGGACTCCGCATGCTCTTCCCCACACACCTTGGTTTTGTGCTTaGAGGCGGCTCTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: LTTQWIQTLGTPHALPHTPWFCA*RRLSPL
Trigger: CAGAGGTGAGAGCCGCCTTCAAGCACAAAACCAAGG...TGTGTGGGGAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000335486.10
CDS-3UTR TCA 90 bp TGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAACCTTGGTTTTGTGCTTaGAGGCGGCTCTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: WHTREEGILRPNWGPKRQPWFCA*RRLSPL
Trigger: CAGAGGTGAGAGCCGCCTTCAAGCACAAAACCAAGG...TTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000335486.10
CDS-3UTR TCA 90 bp GGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGTGCCACCTCTTTGGCCCTaGGTCCCCAAGCCCCACCAA +
Preference number: 4 (lower is better)
Translates to: GHRLHRKLTLKQGRHRGVPPLWP*VPKPHQ
Trigger: TTGGTGGGGCTTGGGGACTCAGGGCCAAAGAGGTGG...CACACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GTGGGGAACTCACCACTCAGTGGATTCAGACACTGGGGACTCCGCATGCTCTTCGGGGTGTGGAGGGGCTaGATGAAATCATGGTCACAG +
Preference number: 4 (lower is better)
Translates to: VGNSPLSGFRHWGLRMLFGVWRG*MKSWSQ
Trigger: CTGTGACCATGATTTCATTCAGCCCCTCCACACCCC...GAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGTGGGAGAGGCCTGCAGATaGGTGGTCCACTCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: GHRLHRKLTLKQGRHRGVGEACR*VVHSRR
Trigger: TCGCCTGGAGTGGACCACTCATCTGCAGGCCTCTCC...CACACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GCCTCGCCTGACAGAAGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCAGATTCAAGGCTGTCTaGTCCGAGAGGGACTTACTG +
Preference number: 4 (lower is better)
Translates to: ASPDRRAKVHPCRHAAPCRFKAV*SERDLL
Trigger: CAGTAAGTCCCTCTCGGAGCAGACAGCCTTGAATCT...GCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR GCA 90 bp CGAATTGGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCGTGGCCTCACTGTGCTaGTTACGTGTCAATCTGTGC +
Preference number: 4 (lower is better)
Translates to: RIGVQRGKTHSGWPRSSPVASLC*LRVNLC
Trigger: GCACAGATTGACACGTAAGCAGCACAGTGAGGCCAC...GGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR GCA 90 bp GCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCATTTCATTCTGTTTGGGGGTCCAGCGGGACCACCTaGATGAGGATGGCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: AARRGSMGKGGAFHSVWGSSGTT*MRMAKL
Trigger: CAACTTTGCCATCCTCATGCAGGTGGTCCCGCTGGA...CCCCCAAACAGAATGAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp AGAGCTGCTCGTGAGCGACCAGACCTTGGTTTTGTGCTTGAAGGCGGCTCTCACTCCAGCGGGACCACCTaGATGAGGATGGCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: RAARERPDLGFVLEGGSHSSGTT*MRMAKL
Trigger: CAACTTTGCCATCCTCATGCAGGTGGTCCCGCTGGA...GTGAGAGCCGCCTTCAAGCACAAAACCAAGGTCTGGTCGCTCACGAGCAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp AGAGGAGTCTGTGCCGGTGCAACTCCGGAACCAGATGTGCGAGGGAGGTTGGGAAGTAGTAACGGTGCTTaGTGTCCTCCGACCCAAAGA +
Preference number: 4 (lower is better)
Translates to: RGVCAGATPEPDVRGRLGSSNGA*CPPTQR
Trigger: TCTTTGGGTCGGAGGACAGCAAGCACCGTTACTACT...TCCCAACCTCCCTCGCACATCTGGTTCCGGAGTTGCACCGGCACAGACTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp CTCACCACTCAGTGGATTCAGACACTGGGGACTCCGCATGCTCTTCCCCACACACAGCAGCACGGCCACTaGCTTGGCTGTCAACTTGAA +
Preference number: 4 (lower is better)
Translates to: LTTQWIQTLGTPHALPHTQQHGH*LGCQLE
Trigger: TTCAAGTTGACAGCCAAGGCAGTGGCCGTGCTGCTG...TGTGTGGGGAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGTGGCCTGGGCATCAGGCTaGTGGGCTGAGCAGTGTGCT +
Preference number: 4 (lower is better)
Translates to: GHRLHRKLTLKQGRHRGVAWASG*WAEQCA
Trigger: AGCACACTGCTCAGCCCAGCAGCCTGATGCCCAGGC...CACACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp TGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAACTCTGGGGAAAGCAGTaGCCTGGAAAATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: WHTREEGILRPNWGPKRQLWGKQ*PGKCPP
Trigger: TGGAGGGCATTTTCCAGGGCACTGCTTTCCCCAGAG...TTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CTCACCACTCAGTGGATTCAGACACTGGGGACTCCGCATGCTCTTCCCCACACATTGGTGGCCTCACTGTaGTGCTTACGTGTCCGACTC +
Preference number: 4 (lower is better)
Translates to: LTTQWIQTLGTPHALPHTLVASL*CLRVRL
Trigger: GAGTCGGACACGTAAGCAGCACAGTGAGGCCACCAA...TGTGTGGGGAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp AGAGCTGCTCGTGAGCGACCAGACCTTGGTTTTGTGCTTGAAGGCGGCTCTCACCAATTGCTCAGCCCTTaGCAGCTGCGCACACTCTTG +
Preference number: 4 (lower is better)
Translates to: RAARERPDLGFVLEGGSHQLLSP*QLRTLL
Trigger: CAAGAGTGTGCGCAGCTGGCAAGGGCTGAGCAATTG...GTGAGAGCCGCCTTCAAGCACAAAACCAAGGTCTGGTCGCTCACGAGCAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp GGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGTGGCTGCACTGCCTTCCTaGCACCGGGATCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: GHRLHRKLTLKQGRHRGVAALPS*HRDPPQ
Trigger: CTGAGGTGGATCCCGGTGGCAGGAAGGCAGTGCAGC...CACACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp AGAGCTGCTCGTGAGCGACCAGACCTTGGTTTTGTGCTTGAAGGCGGCTCTCACAGGAGTCTGTGCCGGTaGAACTCCGGAACCAGATGT +
Preference number: 4 (lower is better)
Translates to: RAARERPDLGFVLEGGSHRSLCR*NSGTRC
Trigger: ACATCTGGTTCCGGAGTTGCACCGGCACAGACTCCT...GTGAGAGCCGCCTTCAAGCACAAAACCAAGGTCTGGTCGCTCACGAGCAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp GCTCAAGGGCACCATCACAGTCAGGCCACTGTGTCCTGGGAATCCCCCGAGGAAAGCAATTTCAGAGGCTaGAACAGCCGTAACCAGAGG +
Preference number: 4 (lower is better)
Translates to: AQGHHHSQATVSWESPEESNFRG*NSRNQR
Trigger: CCTCTGGTTACGGCTGTTGCAGCCTCTGAAATTGCT...TTCCTCGGGGGATTCCCAGGACACAGTGGCCTGACTGTGATGGTGCCCTTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CCA 90 bp ACACAGAAGACACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAAGGCCTCCCATGTCATaGAATTGTCCCGCGTATACA +
Preference number: 4 (lower is better)
Translates to: TQKTRLSPALPLQVSGDSRPPMS*NCPAYT
Trigger: TGTATACGCGGGACAATTCCATGACATGGGAGGCCT...TGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTGTCTTCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp ACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAAAACTCACGGAAAACTCTGCCATaGCAGAGGAGCCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: TREEGILRPNWGPKRQNSRKTLP*QRSPPR
Trigger: CCGTGGAGGGCTCCTCTGCCATGGCAGAGTTTTCCG...TGAGTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp CTCCTGTGGCCCAAGAACAACCAAGGAGGCTGGCACACGAGGGAGGAGGGCATCAATCTGTGCTTGAGGTaGACCGTAATGAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LLWPKNNQGGWHTREEGINLCLR*TVMSGE
Trigger: CTCTCCACTCATTACGGTCCACCTCAAGCACAGATT...GATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTGGGCCACAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp CAAGAACAACCAAGGAGGCTGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTCATGAGGTCCGAGTaGAAGGGCTTCGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: QEQPRRLAHEGGGHLKAEFMRSE*KGFALE
Trigger: CTCCAACGCGAAGCCCTTCCACTCGGACCTCATGAA...TTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp TTTCTGGGGTCACGGGAGCCTGGGGCAGTGGCTAAACATGGGACTTTAGTCCATGTGGTCCATGTGACCTaGTTTCTGGGGTCACGGGAG +
Preference number: 4 (lower is better)
Translates to: FLGSREPGAVAKHGTLVHVVHVT*FLGSRE
Trigger: CTCCCGTGACCCCAGAAACCAGGTCACATGGACCAC...ATGGACTAAAGTCCCATGTTTAGCCACTGCCCCAGGCTCCCGTGACCCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp TTTCTGGGGTCACGGGAGCCTGGGGCAGTGGCTAAACATGGGACTTTAGTCCATCAGGTCAAGACATCCTaGTTCCAGAGCCCCACCGTG +
Preference number: 4 (lower is better)
Translates to: FLGSREPGAVAKHGTLVHQVKTS*FQSPTV
Trigger: CACGGTGGGGCTCTGGAACCAGGATGTCTTGACCTG...ATGGACTAAAGTCCCATGTTTAGCCACTGCCCCAGGCTCCCGTGACCCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CCA 90 bp CTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGATCAGGCCCATGTTATTaGAAAGCAAGGGACTTTGGC +
Preference number: 4 (lower is better)
Translates to: LPLQVSGDSAQVGLMVTRSGPCY*KARDFG
Trigger: GCCAAAGTCCCTTGCTTTCCAATAACATGGGCCTGA...TCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR TCA 90 bp AAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCAGGAGTCTCCAGTTGTATCCTaGAGTTCATGGATCCCATCC +
Preference number: 4 (lower is better)
Translates to: KGSPLQTCCSLPTLPMQESPVVS*SSWIPS
Trigger: GGATGGGATCCATGAACTTCAGGATACAACTGGAGA...CTCCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp TTTCTGGGGTCACGGGAGCCTGGGGCAGTGGCTAAACATGGGACTTTAGTCCATCCACAGCACAACCGTTaGCAGCAAGCACGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: FLGSREPGAVAKHGTLVHPQHNR*QQARQR
Trigger: TCTTTGGCGTGCTTGCTGTCAACGGTTGTGCTGTGG...ATGGACTAAAGTCCCATGTTTAGCCACTGCCCCAGGCTCCCGTGACCCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp ACCAAGGCACAGAGGCTGAACATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGGAATTCAGGAGACAATaGAAGAGGAATATGAACAGT +
Preference number: 4 (lower is better)
Translates to: TKAQRLNIPSWCCGTGPEEFRRQ*KRNMNS
Trigger: ACTGTTCATATTCCTCTTTCATTGTCTCCTGAATTC...CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGCTTAATTCACATCTATaGTCCCAAACCTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLLNSHL*SQTCVP
Trigger: TGGAACACAGGTTTGGGATCATAGATGTGAATTAAG...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp ACCAAGGCACAGAGGCTGAACATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGTATCAAAACCAGGTTTaGATGTCTTACCCACATTTC +
Preference number: 4 (lower is better)
Translates to: TKAQRLNIPSWCCGTGPEYQNQV*MSYPHF
Trigger: GAAATGTGGGTAAGACATTCAAACCTGGTTTTGATA...CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CACGGTTGCAGGGGCCATACGCAGGGCCCGTGGCACTGTCACCATGTGGCAGGTCTGCTCTGTTTTACATaGGTGAAGTCATTCAATTGC +
Preference number: 4 (lower is better)
Translates to: HGCRGHTQGPWHCHHVAGLLCFT*VKSFNC
Trigger: GCAATTGAATGACTTCACTCATGTAAAACAGAGCAG...ACCTGCCACATGGTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR TCA 90 bp GCTCAAGGGCACCATCACAGTCAGGCCACTGTGTCCTGGGAATCCCCCGAGGAATCGGATCGTCGTGGATaGGTGACACTGAATTTTCTC +
Preference number: 4 (lower is better)
Translates to: AQGHHHSQATVSWESPEESDRRG*VTLNFL
Trigger: GAGAAAATTCAGTGTCACTCATCCACGACGATCCGA...TTCCTCGGGGGATTCCCAGGACACAGTGGCCTGACTGTGATGGTGCCCTTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp TTTCTGGGGTCACGGGAGCCTGGGGCAGTGGCTAAACATGGGACTTTAGTCCATCAGCAGCACGGCCACTaGCTTGGCTGTCAACTTGAA +
Preference number: 4 (lower is better)
Translates to: FLGSREPGAVAKHGTLVHQQHGH*LGCQLE
Trigger: TTCAAGTTGACAGCCAAGGCAGTGGCCGTGCTGCTG...ATGGACTAAAGTCCCATGTTTAGCCACTGCCCCAGGCTCCCGTGACCCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp AAGGGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGCTTGGTGGAGGCCATaGCTGGCCGGGTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: KGHRLHRKLTLKQGRHRGAWWRP*LAGSHS
Trigger: TGAATGGGACCCGGCCAGGCATGGCCTCCACCAAGC...ACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp AGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCCACAGACACCACGAGTaGTATCAGCACAGTATGAAC +
Preference number: 4 (lower is better)
Translates to: RAKVHPCRHAAPCLPSPCHRHHE*YQHSMN
Trigger: GTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTG...GCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CTCACCACTCAGTGGATTCAGACACTGGGGACTCCGCATGCTCTTCCCCACACACTCTCGAGCTCCTTCTaGTCTGGCTCAAGTTCACAC +
Preference number: 4 (lower is better)
Translates to: LTTQWIQTLGTPHALPHTLSSSF*SGSSSH
Trigger: GTGTGAACTTGAGCCAGACCAGAAGGAGCTCGAGAG...TGTGTGGGGAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp AGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCAGGTTGGAGGATACATaGCCCATGACGGTGTCAATA +
Preference number: 4 (lower is better)
Translates to: RAKVHPCRHAAPCLPSPCRLEDT*PMTVSI
Trigger: TATTGACACCGTCATGGGCCATGTATCCTCCAACCT...GCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp CTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATGAACCTCACGACGACAGCGCCACCTaGTGTCCGCGTGCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LTHISQTPRVLSAQYEPHDDSAT*CPRASS
Trigger: GGAGCTTGCACGCGGACACCAGGTGGCGCTGTCGTC...GTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR CCA 90 bp AAGGGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGACAGGTCGACGCGGTaGGCAGAGTGGCTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: KGHRLHRKLTLKQGRHRGDRSTR*AEWLLL
Trigger: CAAGAGCAGCCACTCTGCCCACCGCGTCGACCTGTC...ACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp TCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACGGAGATCTTAAGGCCGAATTaGGGTCCAAAGAGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: SPGQWGLSAGRSHGDQTEILRPN*GPKRQN
Trigger: GTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGAT...CTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CAAGAACAACCAAGGAGGCTGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAAGGGAAAGCAGTGCCCTaGAAAATGCCCTCCACTTTC +
Preference number: 4 (lower is better)
Translates to: QEQPRRLAHEGGGHLKAEGKAVP*KMPSTF
Trigger: GAAAGTGGAGGGCATTTTCCAGGGCACTGCTTTCCC...TTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp AAGAAGCCACCAGGTGGGCTGCAAAAGGGCCACAGGCTCCATAGAAAACTCACTGTGGTCCATGTGACCTaGTTTCTGGGGTCACGGGAG +
Preference number: 4 (lower is better)
Translates to: KKPPGGLQKGHRLHRKLTVVHVT*FLGSRE
Trigger: CTCCCGTGACCCCAGAAACCAGGTCACATGGACCAC...AGTGAGTTTTCTATGGAGCCTGTGGCCCTTTTGCAGCCCACCTGGTGGCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp ACAACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGAGCTTCCCTTTTCTCTaGAGAAGGTTTTGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: TTPMSRQQQGEGPWAKVGSFPFL*RRFCAW
Trigger: CCACGCACAAAACCTTCTTCAGAGAAAAGGGAAGCT...CCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp GTGGGGAACTCACCACTCAGTGGATTCAGACACTGGGGACTCCGCATGCTCTTCGCTATCAGCACAGTATaGACCTCACAGCCCGTATCT +
Preference number: 4 (lower is better)
Translates to: VGNSPLSGFRHWGLRMLFAISTV*TSQPVS
Trigger: AGATACGGGCTGTGAGGTTCATACTGTGCTGATAGC...GAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CTGAGGGTGCGTGGGGACCTGAACCACCTCTTTGGCCCTGAGTCCCCAAGCCCCTCTGTTTTACATGAGTaGAGTCATTCAATTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LRVRGDLNHLFGPESPSPSVLHE*SHSIAQ
Trigger: CTGAGCAATTGAATGACTTCACTCATGTAAAACAGA...GGGGCTTGGGGACTCAGGGCCAAAGAGGTGGTTCAGGTCCCCACGCACCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp GCTCAAGGGCACCATCACAGTCAGGCCACTGTGTCCTGGGAATCCCCCGAGGAATTACGTGTCAATCTGTaGTTGAGGTGGACCGTAATG +
Preference number: 4 (lower is better)
Translates to: AQGHHHSQATVSWESPEELRVNL*LRWTVM
Trigger: CATTACGGTCCACCTCAAGCACAGATTGACACGTAA...TTCCTCGGGGGATTCCCAGGACACAGTGGCCTGACTGTGATGGTGCCCTTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR GCA 90 bp AGAGGAGTCTGTGCCGGTGCAACTCCGGAACCAGATGTGCGAGGGAGGTTGGGAACAGCCAGCAATTGTTaGTTGTTCCGTAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: RGVCAGATPEPDVRGRLGTASNC*LFRNCP
Trigger: TGGACAGTTACGGAACAAGCAACAATTGCTGGCTGT...TCCCAACCTCCCTCGCACATCTGGTTCCGGAGTTGCACCGGCACAGACTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp AAGAAGCCACCAGGTGGGCTGCAAAAGGGCCACAGGCTCCATAGAAAACTCACTCTCTGGGGAAAGCAGTaGCCTGGAAAATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: KKPPGGLQKGHRLHRKLTLWGKQ*PGKCPP
Trigger: TGGAGGGCATTTTCCAGGGCACTGCTTTCCCCAGAG...AGTGAGTTTTCTATGGAGCCTGTGGCCCTTTTGCAGCCCACCTGGTGGCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CGAATTGGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCAGCTGCGCACACTCTTaGCCCACTTTACAAATGAAG +
Preference number: 4 (lower is better)
Translates to: RIGVQRGKTHSGWPRSSPSCAHS*PTLQMK
Trigger: CTTCATTTGTAAAGTGGGGCAAGAGTGTGCGCAGCT...GGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CCA 90 bp AAGGGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGTGAGCGCACAGCCGTaGTTCGACCAGACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KGHRLHRKLTLKQGRHRGVSAQP*FDQTPS
Trigger: AGAAGGGGTCTGGTCGAACCACGGCTGTGCGCTCAC...ACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp ACAACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGGTCCATGGGCAAAGGTaGGGCATTTCATTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: TTPMSRQQQGEGPWAKVGVHGQR*GISFCL
Trigger: CAAACAGAATGAAATGCCCCACCTTTGCCCATGGAC...CCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCATTTCATTCTGTTTGGGGGGAACTCACCACTCAGTaGATTCAGACACTGGGGACT +
Preference number: 4 (lower is better)
Translates to: AARRGSMGKGGAFHSVWGELTTQ*IQTLGT
Trigger: AGTCCCCAGTGTCTGAATCCACTGAGTGGTGAGTTC...CCCCCAAACAGAATGAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp AGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCGATCATGCCCACACATaGGTCCATAACAATTATCCC +
Preference number: 4 (lower is better)
Translates to: RAKVHPCRHAAPCLPSPCDHAHT*VHNNYP
Trigger: GGGATAATTGTTATGGACCCATGTGTGGGCATGATC...GCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GGAGGCTGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGCAGCCCGTATCTCGGTaGTGTCTTAATTCACATCTA +
Preference number: 4 (lower is better)
Translates to: GGWHTREEGILRPNWGPKQPVSR*CLNSHL
Trigger: TAGATGTGAATTAAGACACCACCGAGATACGGGCTG...CTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CTCACCACTCAGTGGATTCAGACACTGGGGACTCCGCATGCTCTTCCCCACACATTCCAATGGCAGCAGTaGAGTACATGGCGATCTCAT +
Preference number: 4 (lower is better)
Translates to: LTTQWIQTLGTPHALPHTFQWQQ*STWRSH
Trigger: ATGAGATCGCCATGTACTTCACTGCTGCCATTGGAA...TGTGTGGGGAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp AAGAAGCCACCAGGTGGGCTGCAAAAGGGCCACAGGCTCCATAGAAAACTCACTCCGACCCAAAGACCTTaGTCACCATGCTGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: KKPPGGLQKGHRLHRKLTPTQRP*SPCCRG
Trigger: ACCTCTACAGCATGGTGATCAAGGTCTTTGGGTCGG...AGTGAGTTTTCTATGGAGCCTGTGGCCCTTTTGCAGCCCACCTGGTGGCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CGAATTGGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCAATGAAAGAGGAATATaGACAGTCCCTGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: RIGVQRGKTHSGWPRSSPNERGI*TVPAGS
Trigger: ACTCCCTGCAGGGACTGTTCATATTCCTCTTTCATT...GGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATGAACCTCACCCAAGGCACAGAGGCTaGACATCCCCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LTHISQTPRVLSAQYEPHPRHRG*TSPPGA
Trigger: AGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGG...GTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp AAGAAGCCACCAGGTGGGCTGCAAAAGGGCCACAGGCTCCATAGAAAACTCACTGCCCCACTTTACAAATaGAGCCACGAAGCCACATGG +
Preference number: 4 (lower is better)
Translates to: KKPPGGLQKGHRLHRKLTAPLYK*SHEATW
Trigger: CCATGTGGCTTCGTGGCTTCATTTGTAAAGTGGGGC...AGTGAGTTTTCTATGGAGCCTGTGGCCCTTTTGCAGCCCACCTGGTGGCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR GCA 90 bp GGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGTGACACGAAGACTCGGTTaGTGCTGTTGGTGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: GHRLHRKLTLKQGRHRGVTRRLG*CCWWPH
Trigger: GTGAGGCCACCAACAGCAGCAACCGAGTCTTCGTGT...CACACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp ACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAAAACTCACAGACCTTGGTTTTGTaGTTGAAGGCGGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: TREEGILRPNWGPKRQNSQTLVL*LKAALT
Trigger: GGTGAGAGCCGCCTTCAAGCACAAAACCAAGGTCTG...TGAGTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GTGGGGAACTCACCACTCAGTGGATTCAGACACTGGGGACTCCGCATGCTCTTCCACAGACACCACGAGTaGTATCAGCACAGTATGAAC +
Preference number: 4 (lower is better)
Translates to: VGNSPLSGFRHWGLRMLFHRHHE*YQHSMN
Trigger: GTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTG...GAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp TCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACGGAGAATAAACTACCTTTCTaGTCAGGAGAACCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: SPGQWGLSAGRSHGDQTENKLPF*SGEPES
Trigger: TGACTCTGGTTCTCCTGAGCAGAAAGGTAGTTTATT...CTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CCA 90 bp AATTATCCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACTGCGTGGTTTTCCCCTaGAGCGCCCGCCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: NYPISSGAESESINFPQHCVVFP*SARLLL
Trigger: GAGGAGCAGGCGGGCGCTCCAGGGGAAAACCACGCA...GTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGGATAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp GGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGTGAAATCAGGTGGCTGGTaGCGAACAGCAGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GHRLHRKLTLKQGRHRGVKSGGW*RTAGSP
Trigger: AGGACTGCCTGCTGTTCGCCACCAGCCACCTGATTT...CACACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp CTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATGAACCTCACAGCGCTGGTTCCGGATaGTGCTCACGGAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: LTHISQTPRVLSAQYEPHSAGSG*CSRRTA
Trigger: TGCTGTCCTCCGTGAGCACCATCCGGAACCAGCGCT...GTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR CCA 90 bp AGAGCTGCTCGTGAGCGACCAGACCTTGGTTTTGTGCTTGAAGGCGGCTCTCACGTCCATGGGCAAAGGTaGGGCATTTCATTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: RAARERPDLGFVLEGGSHVHGQR*GISFCL
Trigger: CAAACAGAATGAAATGCCCCACCTTTGCCCATGGAC...GTGAGAGCCGCCTTCAAGCACAAAACCAAGGTCTGGTCGCTCACGAGCAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CCA 90 bp CTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATGAACCTCACAGGCCTGCAGATGAGTaGTCCACTCCAGGCGACCAG +
Preference number: 4 (lower is better)
Translates to: LTHISQTPRVLSAQYEPHRPADE*STPGDQ
Trigger: CTGGTCGCCTGGAGTGGACCACTCATCTGCAGGCCT...GTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CTATCAGCACAGTATGAACCTCACAGCCCGTATCTCGGTGGTGTCTTAATTCACAGGCCTGCAGATGAGTaGTCCACTCCAGGCGACCAG +
Preference number: 4 (lower is better)
Translates to: LSAQYEPHSPYLGGVLIHRPADE*STPGDQ
Trigger: CTGGTCGCCTGGAGTGGACCACTCATCTGCAGGCCT...GTGAATTAAGACACCACCGAGATACGGGCTGTGAGGTTCATACTGTGCTGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GCTCAAGGGCACCATCACAGTCAGGCCACTGTGTCCTGGGAATCCCCCGAGGAACTTGAGATTCTTCAGTaGTCAATAAACACGTTGCGA +
Preference number: 4 (lower is better)
Translates to: AQGHHHSQATVSWESPEELEILQ*SINTLR
Trigger: TCGCAACGTGTTTATTGATCACTGAAGAATCTCAAG...TTCCTCGGGGGATTCCCAGGACACAGTGGCCTGACTGTGATGGTGCCCTTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp GAGACACACACCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCCTCGTCTCAAAACTTaGGATTCTTCAGTGATCAAT +
Preference number: 4 (lower is better)
Translates to: ETHTTASAGCGELTTQWIPRLKT*DSSVIN
Trigger: ATTGATCACTGAAGAATCTCAAGTTTTGAGACGAGG...AATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGGTGTGTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp AAGAAGCCACCAGGTGGGCTGCAAAAGGGCCACAGGCTCCATAGAAAACTCACTACCCTATCACGAGGTTaGCGTTGGACTCTCCATAGT +
Preference number: 4 (lower is better)
Translates to: KKPPGGLQKGHRLHRKLTTLSRG*RWTLHS
Trigger: ACTATGGAGAGTCCAACGTCAACCTCGTGATAGGGT...AGTGAGTTTTCTATGGAGCCTGTGGCCCTTTTGCAGCCCACCTGGTGGCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp AAGAAGCCACCAGGTGGGCTGCAAAAGGGCCACAGGCTCCATAGAAAACTCACTCTGTCAGGTTGGTTATaGTGGGATGGTAGGCATCTG +
Preference number: 4 (lower is better)
Translates to: KKPPGGLQKGHRLHRKLTLSGWL*WDGRHL
Trigger: CAGATGCCTACCATCCCATCATAACCAACCTGACAG...AGTGAGTTTTCTATGGAGCCTGTGGCCCTTTTGCAGCCCACCTGGTGGCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp CTATCAGCACAGTATGAACCTCACAGCCCGTATCTCGGTGGTGTCTTAATTCACGGATGGCAAAGTTGGTaGGGTGAGTGCAGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: LSAQYEPHSPYLGGVLIHGWQSW*GECSGR
Trigger: TCTGCCGCTGCACTCACCTCACCAACTTTGCCATCC...GTGAATTAAGACACCACCGAGATACGGGCTGTGAGGTTCATACTGTGCTGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATGAACCTCACGGATGGCAAAGTTGGTaGGGTGAGTGCAGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: LTHISQTPRVLSAQYEPHGWQSW*GECSGR
Trigger: TCTGCCGCTGCACTCACCTCACCAACTTTGCCATCC...GTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp AAGAAGCCACCAGGTGGGCTGCAAAAGGGCCACAGGCTCCATAGAAAACTCACTGCTATCAGCACAGTATaGACCTCACAGCCCGTATCT +
Preference number: 4 (lower is better)
Translates to: KKPPGGLQKGHRLHRKLTAISTV*TSQPVS
Trigger: AGATACGGGCTGTGAGGTTCATACTGTGCTGATAGC...AGTGAGTTTTCTATGGAGCCTGTGGCCCTTTTGCAGCCCACCTGGTGGCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATGAACCTCACAGCCTGGGCCTCGCCTaGCAGAAGAGCAAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: LTHISQTPRVLSAQYEPHSLGLA*QKSKGS
Trigger: TGAACCTTTGCTCTTCTGTCAGGCGAGGCCCAGGCT...GTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp AATTATCCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACAGACGGAGCGCACTGTaGTACCTGCCGCGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: NYPISSGAESESINFPQHRRSAL*YLPRGL
Trigger: CAGACCACGCGGCAGGTAGCACAGTGCGCTCCGTCT...GTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGGATAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CTATCAGCACAGTATGAACCTCACAGCCCGTATCTCGGTGGTGTCTTAATTCACGTGGCCTCACTGTGCTaGTTACGTGTCCGACTCTCC +
Preference number: 4 (lower is better)
Translates to: LSAQYEPHSPYLGGVLIHVASLC*LRVRLS
Trigger: GGAGAGTCGGACACGTAAGCAGCACAGTGAGGCCAC...GTGAATTAAGACACCACCGAGATACGGGCTGTGAGGTTCATACTGTGCTGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp GCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCATTTCATTCTGTTTGGGGGGGCTTATTTTTGGCCTaGCCTTTTTGTGCCGAATAC +
Preference number: 4 (lower is better)
Translates to: AARRGSMGKGGAFHSVWGGLFLA*PFCAEY
Trigger: GTATTCGGCACAAAAAGGGCAGGCCAAAAATAAGCC...CCCCCAAACAGAATGAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CCA 90 bp CCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACAGAAGACCCGACTCGCAGTCCTaGGAAAGCAATCCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PISSGAESESINFPQHRRPDSQS*ESNPRS
Trigger: TGACCTGGGATTGCTTTCCCAGGACTGCGAGTCGGG...TCTTCTGTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp AAGGGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTTTCATGAGGTCCGAGTaGAAGGGCTTCGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: KGHRLHRKLTLKQGRHRGFMRSE*KGFALE
Trigger: CTCCAACGCGAAGCCCTTCCACTCGGACCTCATGAA...ACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp TTTCTGGGGTCACGGGAGCCTGGGGCAGTGGCTAAACATGGGACTTTAGTCCATGTCCATGGGCAAAGGTaGGGCATTTCATTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: FLGSREPGAVAKHGTLVHVHGQR*GISFCL
Trigger: CAAACAGAATGAAATGCCCCACCTTTGCCCATGGAC...ATGGACTAAAGTCCCATGTTTAGCCACTGCCCCAGGCTCCCGTGACCCCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCATTTCATTCTGTTTGGGGGATCTTAAGGCCGAATTaGGGTCCAAAGAGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: AARRGSMGKGGAFHSVWGILRPN*GPKRQN
Trigger: GTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGAT...CCCCCAAACAGAATGAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp AATTATCCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACTCACCATGTGGCAGGTaGCTGGTGCAGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: NYPISSGAESESINFPQHSPCGR*LVQPGP
Trigger: AGGCCCAGGCTGCACCAGCCACCTGCCACATGGTGA...GTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGGATAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GCCTCGCCTGACAGAAGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCGAATTCAGGAGACAATaGAAGAGGAATATGAACAGT +
Preference number: 4 (lower is better)
Translates to: ASPDRRAKVHPCRHAAPCEFRRQ*KRNMNS
Trigger: ACTGTTCATATTCCTCTTTCATTGTCTCCTGAATTC...GCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GCCTCGCCTGACAGAAGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCTATCAAAACCAGGTTTaGATGTCTTACCCACATTTC +
Preference number: 4 (lower is better)
Translates to: ASPDRRAKVHPCRHAAPCYQNQV*MSYPHF
Trigger: GAAATGTGGGTAAGACATTCAAACCTGGTTTTGATA...GCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATGAACCTCACTCCAGCGGGACCACCTaGATGAGGATGGCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LTHISQTPRVLSAQYEPHSSGTT*MRMAKL
Trigger: CAACTTTGCCATCCTCATGCAGGTGGTCCCGCTGGA...GTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp AAACCAGGTTTGAATGTCTTACCCACATTTCACAGACACCACGAGTGCTATCAGTGCCTACCCTCCCCATaGAGGAGAGGCCTGCAGATG +
Preference number: 4 (lower is better)
Translates to: KPGLNVLPTFHRHHECYQCLPSP*RRGLQM
Trigger: CATCTGCAGGCCTCTCCTGCATGGGGAGGGTAGGCA...CTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAGACATTCAAACCTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATGAACCTCACGTGGACCGTAATGAGTaGAGAGCCCGACAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LTHISQTPRVLSAQYEPHVDRNE*RARQVL
Trigger: CAGAACCTGTCGGGCTCTCCACTCATTACGGTCCAC...GTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp AAACCAGGTTTGAATGTCTTACCCACATTTCACAGACACCACGAGTGCTATCAGGTGAGCGCACAGCCGTaGTTCGACCAGACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KPGLNVLPTFHRHHECYQVSAQP*FDQTPS
Trigger: AGAAGGGGTCTGGTCGAACCACGGCTGTGCGCTCAC...CTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAGACATTCAAACCTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATGAACCTCACAAAACTCACAGCGGATaGCCGAGAAGCTCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LTHISQTPRVLSAQYEPHKTHSG*PRSSPK
Trigger: CTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTT...GTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACAGAAGAGGCGTGATGAGGATCTaGCACTGTGGTCCATGTGAC +
Preference number: 4 (lower is better)
Translates to: PISSGAESESINFPQHRRGVMRI*HCGPCD
Trigger: GTCACATGGACCACAGTGCCAGATCCTCATCACGCC...TCTTCTGTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp TGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAAGAAAGCAAGGGACTTTaGCATTTCTATCGCAACAAG +
Preference number: 4 (lower is better)
Translates to: WHTREEGILRPNWGPKRQESKGL*HFYRNK
Trigger: CTTGTTGCGATAGAAATGCCAAAGTCCCTTGCTTTC...TTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR TCA 90 bp GTGGGGAACTCACCACTCAGTGGATTCAGACACTGGGGACTCCGCATGCTCTTCCAAATGACAGTGAAATaGTGCAGATCAGAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: VGNSPLSGFRHWGLRMLFQMTVK*CRSEEE
Trigger: TTCCTCTTCTGATCTGCATCATTTCACTGTCATTTG...GAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAGTTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR TCA 90 bp CAAGAACAACCAAGGAGGCTGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAACAAATGACAGTGAAATaGTGCAGATCAGAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: QEQPRRLAHEGGGHLKAEQMTVK*CRSEEE
Trigger: TTCCTCTTCTGATCTGCATCATTTCACTGTCATTTG...TTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR TCA 90 bp TGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAACTTAATTCACATCTATaGTCCCAAACCTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: WHTREEGILRPNWGPKRQLNSHL*SQTCVP
Trigger: TGGAACACAGGTTTGGGATCATAGATGTGAATTAAG...TTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp AAGGGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTAGAGTCAGCGTCTGTTaGTGGCATCCAGACATCTCT +
Preference number: 4 (lower is better)
Translates to: KGHRLHRKLTLKQGRHRGRVSVC*WHPDIS
Trigger: AGAGATGTCTGGATGCCAGCAACAGACGCTGACTCT...ACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CCA 90 bp TATCCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACAGAAGTCCTGGTGATGCATaGCCTCCGCGATCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: YPISSGAESESINFPQHRSPGDA*PPRSWC
Trigger: ACACCAAGATCGCGGAGGCCATGCATCACCAGGACT...TCTGTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp AAACCAGGTTTGAATGTCTTACCCACATTTCACAGACACCACGAGTGCTATCAGGTGGTCCATGTGACCTaGTTTCTGGGGTCACGGGAG +
Preference number: 4 (lower is better)
Translates to: KPGLNVLPTFHRHHECYQVVHVT*FLGSRE
Trigger: CTCCCGTGACCCCAGAAACCAGGTCACATGGACCAC...CTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAGACATTCAAACCTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp TATCCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACAGAGGCGTGATGAGGATCTaGCACTGTGGTCCATGTGAC +
Preference number: 4 (lower is better)
Translates to: YPISSGAESESINFPQHRGVMRI*HCGPCD
Trigger: GTCACATGGACCACAGTGCCAGATCCTCATCACGCC...TCTGTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp TGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAATATCAAAACCAGGTTTaGATGTCTTACCCACATTTC +
Preference number: 4 (lower is better)
Translates to: WHTREEGILRPNWGPKRQYQNQV*MSYPHF
Trigger: GAAATGTGGGTAAGACATTCAAACCTGGTTTTGATA...TTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATGAACCTCACTTGGTGGCCTCACTGTaGTGCTTACGTGTCAATCTG +
Preference number: 4 (lower is better)
Translates to: LTHISQTPRVLSAQYEPHLVASL*CLRVNL
Trigger: CAGATTGACACGTAAGCAGCACAGTGAGGCCACCAA...GTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR GCA 90 bp AATTATCCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACACACGAAGACTCGGTTaGTGCTGTTGGTGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: NYPISSGAESESINFPQHTRRLG*CCWWPH
Trigger: GTGAGGCCACCAACAGCAGCAACCGAGTCTTCGTGT...GTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGGATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATGAACCTCACCAACACCTGAAATCCTaGATGGTCCTGCGATCTGGA +
Preference number: 4 (lower is better)
Translates to: LTHISQTPRVLSAQYEPHQHLKS*MVLRSG
Trigger: TCCAGATCGCAGGACCATCCAGGATTTCAGGTGTTG...GTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp AATTATCCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACCAAGGAGAGGGTCCATaGGCAAAGGTGGGGCATTTC +
Preference number: 4 (lower is better)
Translates to: NYPISSGAESESINFPQHQGEGP*AKVGHF
Trigger: GAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTG...GTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGGATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp GGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGTGGATCATGCCCACACATaGGTCCATAACAATTATCCC +
Preference number: 4 (lower is better)
Translates to: GHRLHRKLTLKQGRHRGVDHAHT*VHNNYP
Trigger: GGGATAATTGTTATGGACCCATGTGTGGGCATGATC...CACACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR TCA 90 bp GGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGTGGGTAAATGCCTTTGTTaGCCTTCCCTTCCACAATAT +
Preference number: 4 (lower is better)
Translates to: GHRLHRKLTLKQGRHRGVGKCLC*PSLPQY
Trigger: ATATTGTGGAAGGGAAGGTCAACAAAGGCATTTACC...CACACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp AAACCAGGTTTGAATGTCTTACCCACATTTCACAGACACCACGAGTGCTATCAGCCGACCCAAAGACCTTaGTCACCATGCTGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: KPGLNVLPTFHRHHECYQPTQRP*SPCCRG
Trigger: ACCTCTACAGCATGGTGATCAAGGTCTTTGGGTCGG...CTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAGACATTCAAACCTGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR GCA 90 bp TATCCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACAGATCAGGTAGTAGTGCATaGTGTGGTACAGCAGACCCA +
Preference number: 4 (lower is better)
Translates to: YPISSGAESESINFPQHRSGSSA*CGTADP
Trigger: TGGGTCTGCTGTACCACAGCATGCACTACTACCTGA...TCTGTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CCA 90 bp AAACCAGGTTTGAATGTCTTACCCACATTTCACAGACACCACGAGTGCTATCAGAGTGGATTCAGACACTaGGGACTCCGCATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: KPGLNVLPTFHRHHECYQSGFRH*GLRMLF
Trigger: GAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACT...CTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAGACATTCAAACCTGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp CTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATGAACCTCACCAGCCCGTATCTCGGTaGTGTCTTAATTCACATCTA +
Preference number: 4 (lower is better)
Translates to: LTHISQTPRVLSAQYEPHQPVSR*CLNSHL
Trigger: TAGATGTGAATTAAGACACCACCGAGATACGGGCTG...GTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR GCA 90 bp CTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATGAACCTCACGAAGACAATAAAGCATaGTTTCCAATGGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LTHISQTPRVLSAQYEPHEDNKA*FPMAAV
Trigger: CACTGCTGCCATTGGAAAGCATGCTTTATTGTCTTC...GTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR TCA 90 bp AAGGGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGAATTCAGGAGACAATaGAAGAGGAATATGAACAGT +
Preference number: 4 (lower is better)
Translates to: KGHRLHRKLTLKQGRHRGEFRRQ*KRNMNS
Trigger: ACTGTTCATATTCCTCTTTCATTGTCTCCTGAATTC...ACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CCA 90 bp AAACCAGGTTTGAATGTCTTACCCACATTTCACAGACACCACGAGTGCTATCAGCAGCCCGTATCTCGGTaGTGTCTTAATTCACATCTA +
Preference number: 4 (lower is better)
Translates to: KPGLNVLPTFHRHHECYQQPVSR*CLNSHL
Trigger: TAGATGTGAATTAAGACACCACCGAGATACGGGCTG...CTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAGACATTCAAACCTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS GCA 90 bp GGCAGGCGGGTGGGCGGGCGGGCTTCCATGGCTGCACTGCCTTCCTaGCACCGGGATCCACCTCAGGCCTTGCAAGGGGTCACTGGGCGT +
Preference number: 5 (lower is better)
Translates to: GRRVGGRASMAALPS*HRDPPQALQGVTGR
Trigger: ACGCCCAGTGACCCCTTGCAAGGCCTGAGGTGGATCCCGGTGGCAGGAAGGCAGTGCAGCCATGGAAGCCCGCCCGCCCACCCGCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CAA 90 bp CACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGCGGCTCGAGCTCGGCTaGGGCAGGGGCCCCCAACTG +
Preference number: 5 (lower is better)
Translates to: HGCHQPSLSRSVGTQRRSRLELG*GRGPQL
Trigger: CAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCG...CGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp CACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGCCCGCCAGAGCACGGTaGCAGGGGCCATACGCAGGG +
Preference number: 5 (lower is better)
Translates to: HGCHQPSLSRSVGTQRRSPARAR*QGPYAG
Trigger: CCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGG...CGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp TCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACGGAGGCCTGCTCCTCGGGCTaGTCCTGCGGCCGCTCTCGA +
Preference number: 5 (lower is better)
Translates to: SPGQWGLSAGRSHGDQTEACSSG*SCGRSR
Trigger: TCGAGAGCGGCCGCAGGACAAGCCCGAGGAGCAGGC...CTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CAA 90 bp TCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACGGAGGAGCACGGCCATCACTaGGCAGGGGGTCGTGCCCGG +
Preference number: 5 (lower is better)
Translates to: SPGQWGLSAGRSHGDQTEEHGHH*AGGRAR
Trigger: CCGGGCACGACCCCCTGCCAAGTGATGGCCGTGCTC...CTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR CAA 90 bp GAGACACACACCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTCGGCTCGAGCTCGGCTaGGGCAGGGGCCCCCAACTG +
Preference number: 5 (lower is better)
Translates to: ETHTTASAGCGELTTQWIRLELG*GRGPQL
Trigger: CAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCG...AATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGGTGTGTGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp CGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCAACTGATGACATGAGGATGCCAATGTaGACCTCCAGCGGGACCACC +
Preference number: 5 (lower is better)
Translates to: RLPPTARARLGQGPPTDDMRMPM*TSSGTT
Trigger: GGTGGTCCCGCTGGAGGTCAACATTGGCATCCTCAT...GTCATCAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335486.10
CDS TCA 90 bp AAACCCGACTCGCAGTCCTGGGAAAGCAATCCCAGGTCACCACTGTaGCCGCGACCTGCGCCCGGGGACGGGAGGCTGTTTGTCCTGCGG +
Preference number: 5 (lower is better)
Translates to: KPDSQSWESNPRSPL*PRPAPGDGRLFVLR
Trigger: CCGCAGGACAAACAGCCTCCCGTCCCCGGGCGCAGGTCGCGGTCACAGTGGTGACCTGGGATTGCTTTCCCAGGACTGCGAGTCGGGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000541143.5
ENST00000543826.5
CDS CCA 90 bp GCTCCTCGGGCTTGTCCTGCGGCCGCTCTCGAGCTCCTTCTGGTCTaGCTCAAGTTCACACCTCCGTCCTGCTCTCTGGGTGGAGGGGGA +
Preference number: 5 (lower is better)
Translates to: APRACPAAALELLLV*LKFTPPSCSLGGGG
Trigger: TCCCCCTCCACCCAGAGAGCAGGACGGAGGTGTGAACTTGAGCCAGACCAGAAGGAGCTCGAGAGCGGCCGCAGGACAAGCCCGAGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000541143.5
CDS CCA 90 bp CGCCTGCTCCTCGGGCTTGTCCTGCGGCCGCTCTCGAGCTCCTTCTaGTCTGGCTCAAGTTCACACCTCCGTCCTGCTCTCTGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: RLLLGLVLRPLSSSF*SGSSSHLRPALWVE
Trigger: CTCCACCCAGAGAGCAGGACGGAGGTGTGAACTTGAGCCAGACCAGAAGGAGCTCGAGAGCGGCCGCAGGACAAGCCCGAGGAGCAGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000541143.5
CDS-3UTR CAA 90 bp ACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTATGGCCTCCGCGATCTaGGTGTGGGCGGGCCAGATG +
Preference number: 5 (lower is better)
Translates to: TSPPSPGQWGLSAGRSHGMASAI*VWAGQM
Trigger: CATCTGGCCCGCCCACACCAAGATCGCGGAGGCCAT...ACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CAA 90 bp CGACTCCCGCCCACGGCTCGAGCTCGGCTTGGGCAGGGGCCCCCAACTGATGACTACACGAAGACTCGGTaGCTGCTGTTGGTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: RLPPTARARLGQGPPTDDYTKTR*LLLVAS
Trigger: TGAGGCCACCAACAGCAGCAACCGAGTCTTCGTGTA...GTCATCAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCGTGGGCGGGAGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS TCA 90 bp CGGTGCTCCAGGCGTGCCTGTGGAAGGCCTCGTGGGGGATCTGGATaGAGCTCTGCCCGTGGGCCGGGAAGCGGTAATGGGAGGAATTCA +
Preference number: 5 (lower is better)
Translates to: RCSRRACGRPRGGSG*SSARGPGSGNGRNS
Trigger: TGAATTCCTCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCAGATCCCCCACGAGGCCTTCCACAGGCACGCCTGGAGCACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
ENST00000544673.5
ENST00000545900.5
CDS TCA 90 bp GTGGTTTCCAAATGTGGCCATGTTGCTGCCCTACAGGCAGGCGGATaGGAGCGATGCTGGGCAGGGAGCGCGTGGCACCCACGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: VVSKCGHVAALQAGG*ERCWAGSAWHPRRC
Trigger: GCACCTGCGTGGGTGCCACGCGCTCCCTGCCCAGCATCGCTCTCATCCGCCTGCCTGTAGGGCAGCAACATGGCCACATTTGGAAACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS GCA 90 bp GGTTACCAAGCGTGGCGTGGCGACCGCCTCCTGTCCTGGACTTTGTaGCGACCTGCTTTTCGAGCCCTCCCCACTCCCGTCCTCATGCTG +
Preference number: 5 (lower is better)
Translates to: GYQAWRGDRLLSWTL*RPAFRALPTPVLML
Trigger: CAGCATGAGGACGGGAGTGGGGAGGGCTCGAAAAGCAGGTCGGCACAAAGTCCAGGACAGGAGGCGGTCGCCACGCCACGCTTGGTAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 90 bp GCCACGGAAAACTCTGCCATGGCAGAGGAGCCCTCCACGGTGACCTaGGGCGTGCTGCCGTGCAGGTTGGAGGATACATGGCCCATGACG +
Preference number: 5 (lower is better)
Translates to: ATENSAMAEEPSTVT*GVLPCRLEDTWPMT
Trigger: CGTCATGGGCCATGTATCCTCCAACCTGCACGGCAGCACGCCCCAGGTCACCGTGGAGGGCTCCTCTGCCATGGCAGAGTTTTCCGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
ENST00000544673.5
ENST00000545900.5
CDS-3UTR CAA 90 bp CATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGTGTCCTGGCCTCGCTGGGTCTTCAAGAGCCTCCGTTaGTCTCAGTCAGGTTTGGAG +
Preference number: 5 (lower is better)
Translates to: HPLLVLRDRPRVSWPRWVFKSLR*SQSGLE
Trigger: CTCCAAACCTGACTGAGACAAACGGAGGCTCTTGAA...GACCCAGCGAGGCCAGGACACTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CAA 90 bp GGCCCACGCCGGCACCACCTACAGAGACACACACCACGGCTAGCGCCGGCTGTGGACCAGACCTTGGTTTaGTGCTTGAAGGCGGCTCTC +
Preference number: 5 (lower is better)
Translates to: GPRRHHLQRHTPRLAPAVDQTLV*CLKAAL
Trigger: GAGAGCCGCCTTCAAGCACAAAACCAAGGTCTGGTC...CACAGCCGGCGCTAGCCGTGGTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS TCA 90 bp CAGGTGCCCTTCACGGAGCGCGTGCTCCTCAACGGCGCCCCAGTCTaGGAACACCAGCAACAGAGGCAGCACCGATGGGTCTCAGTTTGC +
Preference number: 5 (lower is better)
Translates to: QVPFTERVLLNGAPV*EHQQQRQHRWVSVC
Trigger: GCAAACTGAGACCCATCGGTGCTGCCTCTGTTGCTGGTGTTCTCAGACTGGGGCGCCGTTGAGGAGCACGCGCTCCGTGAAGGGCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS GCA 90 bp GCCATGGCAGAGGAGCCCTCCACGGTGACCTGGGGCGTGCTGCCGTaGAGGTTGGAGGATACATGGCCCATGACGGTGTCAATAGTGTCG +
Preference number: 5 (lower is better)
Translates to: AMAEEPSTVTWGVLP*RLEDTWPMTVSIVS
Trigger: CGACACTATTGACACCGTCATGGGCCATGTATCCTCCAACCTGCACGGCAGCACGCCCCAGGTCACCGTGGAGGGCTCCTCTGCCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
ENST00000544673.5
ENST00000545900.5
CDS GCA 90 bp CCATGGCTGCACTGCCTTCCTGCCACCGGGATCCACCTCAGGCCTTaGAAGGGGTCACTGGGCGTTGCGATCAAGGGGTCACTGGGCTTT +
Preference number: 5 (lower is better)
Translates to: PWLHCLPATGIHLRP*KGSLGVAIKGSLGF
Trigger: AAAGCCCAGTGACCCCTTGATCGCAACGCCCAGTGACCCCTTGCAAGGCCTGAGGTGGATCCCGGTGGCAGGAAGGCAGTGCAGCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS CCA 90 bp CAACAGATGGGTTACCAAGCGTGGCGTGGCGACCGCCTCCTGTCCTaGACTTTGTGCCGACCTGCTTTTCGAGCCCTCCCCACTCCCGTC +
Preference number: 5 (lower is better)
Translates to: QQMGYQAWRGDRLLS*TLCRPAFRALPTPV
Trigger: GACGGGAGTGGGGAGGGCTCGAAAAGCAGGTCGGCACAAAGTCCAGGACAGGAGGCGGTCGCCACGCCACGCTTGGTAACCCATCTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS-3UTR CAA 90 bp GCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCATTTCATTCTGTTTGGGGGGAGCACGGCCATCACTaGGCAGGGGGTCGTGCCCGG +
Preference number: 5 (lower is better)
Translates to: AARRGSMGKGGAFHSVWGEHGHH*AGGRAR
Trigger: CCGGGCACGACCCCCTGCCAAGTGATGGCCGTGCTC...CCCCCAAACAGAATGAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR CAA 90 bp ACCAAGGCACAGAGGCTGAACATCCCCTCCTGGTGCTGCGGGACCGGCCCCGAGGTGAGCGACCAGACCTaGGTTTTGTGCTTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: TKAQRLNIPSWCCGTGPEVSDQT*VLCLKA
Trigger: CGCCTTCAAGCACAAAACCAAGGTCTGGTCGCTCAC...CTCGGGGCCGGTCCCGCAGCACCAGGAGGGGATGTTCAGCCTCTGTGCCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp AAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGTGGAAGGGCTTCGCGTaGGAGGTGCGGGCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: KLTADGREAPPSTGTIRQWKGFA*EVRAEL
Trigger: CAGCTCTGCCCGCACCTCCAACGCGAAGCCCTTCCA...CTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp ACACAGAAGACACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCATGGAAGGGCTTCGCGTaGGAGGTGCGGGCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: TQKTRLSPALPLQVSGDSWKGFA*EVRAEL
Trigger: CAGCTCTGCCCGCACCTCCAACGCGAAGCCCTTCCA...TGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTGTCTTCTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp AAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGATGACACAGCACAGGTaGGCCCACGCCGGCACCACC +
Preference number: 5 (lower is better)
Translates to: KLTADGREAPPSTGTIRQMTQHR*AHAGTT
Trigger: GGTGGTGCCGGCGTGGGCCAACCTGTGCTGTGTCAT...CTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp GCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCATTTCATTCTGTTTGGGGGCCCGCCAGAGCACGGTaGCAGGGGCCATACGCAGGG +
Preference number: 5 (lower is better)
Translates to: AARRGSMGKGGAFHSVWGPARAR*QGPYAG
Trigger: CCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGG...CCCCCAAACAGAATGAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGGAAGCCACATGGTGGTaGGAGGACTCACGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLEATWW*EDSRQV
Trigger: CACTTGCCGTGAGTCCTCCAACCACCATGTGGCTTC...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CAA 90 bp TCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACGGAGTGGGGCAGAGCCAGGTaGTATCGCAGGCCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: SPGQWGLSAGRSHGDQTEWGRAR*YRRPGK
Trigger: CTTCCCTGGCCTGCGATACAACCTGGCTCTGCCCCA...CTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS GCA 90 bp CAGCAGCTCTGTCCCCTTCTCCATGAAGGGTGGCTGCTTCCGAGGTaGCGGCACCCAGAGCTATCTCTGGCTGCCTTGACTTCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: QQLCPLLHEGWLLPR*RHPELSLAALTSQE
Trigger: CTCCTGGGAAGTCAAGGCAGCCAGAGATAGCTCTGGGTGCCGGCACCTCGGAAGCAGCCACCCTTCATGGAGAAGGGGACAGAGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376682.8
CDS-3UTR CAA 90 bp AGCGCAGGTCGGTCTCATGGTGACCAGACGGAGCGCACTGTGCTACCTGCCGCGGAGGAATTCACGGTCTaGGGCAGGATTTTGGCCACG +
Preference number: 5 (lower is better)
Translates to: SAGRSHGDQTERTVLPAAEEFTV*GRILAT
Trigger: CGTGGCCAAAATCCTGCCCAAGACCGTGAATTCCTC...CGCGGCAGGTAGCACAGTGCGCTCCGTCTGGTCACCATGAGACCGACCTGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CAA 90 bp CGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCCTCAAGGCCAGTCCCTGCAGGGAGTaGAGCGTGGCAAACATGTAC +
Preference number: 5 (lower is better)
Translates to: RMAEKLPQAQAPSGSLKASPCRE*SVANMY
Trigger: GTACATGTTTGCCACGCTCAACTCCCTGCAGGGACT...GGCCTTGAGGCTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp TTTCTGGGGTCACGGGAGCCTGGGGCAGTGGCTAAACATGGGACTTTAGTCCATCCCGCCAGAGCACGGTaGCAGGGGCCATACGCAGGG +
Preference number: 5 (lower is better)
Translates to: FLGSREPGAVAKHGTLVHPARAR*QGPYAG
Trigger: CCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGG...ATGGACTAAAGTCCCATGTTTAGCCACTGCCCCAGGCTCCCGTGACCCCAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp TCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACGGAGAAGGCGGCTCTCACCTaGAAAGCGGGGAAGGGATCG +
Preference number: 5 (lower is better)
Translates to: SPGQWGLSAGRSHGDQTEKAALT*KAGKGS
Trigger: CGATCCCTTCCCCGCTTTCAAGGTGAGAGCCGCCTT...CTCCGTCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS CCA 90 bp ACCTGCAGCAGGCACCAGGAGGGGCTCTTTCATCCAAGAGCACCCTaGACTTTCTCTTCGGACCTCACATCCCCCAGCCTCCACCACCCT +
Preference number: 5 (lower is better)
Translates to: TCSRHQEGLFHPRAP*TFSSDLTSPSLHHP
Trigger: AGGGTGGTGGAGGCTGGGGGATGTGAGGTCCGAAGAGAAAGTCCAGGGTGCTCTTGGATGAAAGAGCCCCTCCTGGTGCCTGCTGCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 90 bp GATCCCCACAAACAGGTCGGAACCGGAAGTGGAACCCACGCCTTCTaGCCCCAGAGCTCATGCTGCGGACAGGCTCTGTTCGACCTGAAG +
Preference number: 5 (lower is better)
Translates to: DPHKQVGTGSGTHAF*PQSSCCGQALFDLK
Trigger: CTTCAGGTCGAACAGAGCCTGTCCGCAGCATGAGCTCTGGGGCCAGAAGGCGTGGGTTCCACTTCCGGTTCCGACCTGTTTGTGGGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541937.2
CDS-3UTR CAA 90 bp GCAGCAGCCAGGTGTGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCGCTGAGGGATACATTTaGGAGGTAACTCAGTATCAC +
Preference number: 5 (lower is better)
Translates to: AAARCARQSTVAGAIRRAAEGYI*EVTQYH
Trigger: GTGATACTGAGTTACCTCCAAAATGTATCCCTCAGC...GGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCACACCTGGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CAA 90 bp CTCACCACTCAGTGGATTCAGACACTGGGGACTCCGCATGCTCTTCCCCACACAATGACACAGCACAGGTaGGCCCACGCCGGCACCACC +
Preference number: 5 (lower is better)
Translates to: LTTQWIQTLGTPHALPHTMTQHR*AHAGTT
Trigger: GGTGGTGCCGGCGTGGGCCAACCTGTGCTGTGTCAT...TGTGTGGGGAAGAGCATGCGGAGTCCCCAGTGTCTGAATCCACTGAGTGGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS TCA 90 bp CCTCAGACACACATCACCAGGGGAGAGGCCTCTCTTAAGCCCTGCTaGGCTGGGCCAGTGAGCTCTGCCTTCACTGCTTCTCTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: PQTHITRGEASLKPC*AGPVSSAFTASLPA
Trigger: GGCAGGAAGAGAAGCAGTGAAGGCAGAGCTCACTGGCCCAGCTCAGCAGGGCTTAAGAGAGGCCTCTCCCCTGGTGATGTGTGTCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376682.8
CDS GCA 90 bp GCAGTCCTGGGAAAGCAATCCCAGGTCACCACTGTGACCGCGACCTaGGCCCGGGGACGGGAGGCTGTTTGTCCTGCGGTATTTTCTTTT +
Preference number: 5 (lower is better)
Translates to: AVLGKQSQVTTVTAT*ARGREAVCPAVFSF
Trigger: AAAAGAAAATACCGCAGGACAAACAGCCTCCCGTCCCCGGGCGCAGGTCGCGGTCACAGTGGTGACCTGGGATTGCTTTCCCAGGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000541143.5
ENST00000543826.5
CDS GCA 90 bp CGATCTTGGTGTGGGCGGGCCAGATGTTGTTCAGGTAGTAGTGCATaGTGTGGTACAGCAGACCCACGACGGTGCTCCAGGCGTGCCTGT +
Preference number: 5 (lower is better)
Translates to: RSWCGRARCCSGSSA*CGTADPRRCSRRAC
Trigger: ACAGGCACGCCTGGAGCACCGTCGTGGGTCTGCTGTACCACAGCATGCACTACTACCTGAACAACATCTGGCCCGCCCACACCAAGATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
ENST00000544673.5
ENST00000545900.5
CDS CCA 90 bp TCTGCCCGTGGGCCGGGAAGCGGTAATGGGAGGAATTCACGGTCTTaGGCAGGATTTTGGCCACGGAAAACTCTGCCATGGCAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: SARGPGSGNGRNSRS*AGFWPRKTLPWQRS
Trigger: GCTCCTCTGCCATGGCAGAGTTTTCCGTGGCCAAAATCCTGCCCAAGACCGTGAATTCCTCCCATTACCGCTTCCCGGCCCACGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
ENST00000544673.5
ENST00000545900.5
CDS CCA 90 bp AGTCCAGGAAGGCGCAGTACACGAAGACTCGGTTGCTGCTGTTGGTaGCCTCACTGTGCTGCTTACGTGTCCGACTCTCCAGGACGTCCC +
Preference number: 5 (lower is better)
Translates to: SPGRRSTRRLGCCCW*PHCAAYVSDSPGRP
Trigger: GGGACGTCCTGGAGAGTCGGACACGTAAGCAGCACAGTGAGGCCACCAACAGCAGCAACCGAGTCTTCGTGTACTGCGCCTTCCTGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335486.10
ENST00000446583.6
CDS CCA 90 bp CCGCGTGCAAGCTGCGGCAGTACAGACCAGTTGTGCCAGCATGACTaGGATCCACCGACTAAACCAGCACGCATGTGGCATTCTGGCCTC +
Preference number: 5 (lower is better)
Translates to: PRASCGSTDQLCQHD*DPPTKPARMWHSGL
Trigger: GAGGCCAGAATGCCACATGCGTGCTGGTTTAGTCGGTGGATCCCAGTCATGCTGGCACAACTGGTCTGTACTGCCGCAGCTTGCACGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536988.1
CDS CCA 90 bp TCTTCGGACCTCACATCCCCCAGCCTCCACCACCCTTGTTTACTTTaGTCAGCAGCTCGGCCACTCCAGTGGCCCCACTCAGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: SSDLTSPSLHHPCLL*SAARPLQWPHSVPT
Trigger: TGTGGGAACTGAGTGGGGCCACTGGAGTGGCCGAGCTGCTGACCAAAGTAAACAAGGGTGGTGGAGGCTGGGGGATGTGAGGTCCGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS-3UTR CAA 90 bp GAGACACACACCACGGCTAGCGCCGGCTGTGGGGAACTCACCACTCAGTGGATTGCCTTGGCTGTCAACTaGAAGGCACTGGGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: ETHTTASAGCGELTTQWIALAVN*KALGSP
Trigger: TGGAGACCCCAGTGCCTTCAAGTTGACAGCCAAGGC...AATCCACTGAGTGGTGAGTTCCCCACAGCCGGCGCTAGCCGTGGTGTGTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp ACACAGAAGACACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAAGCACGGCCACTGCCTaGGCTGTCAACTTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: TQKTRLSPALPLQVSGDSSTATA*AVNLKA
Trigger: TGCCTTCAAGTTGACAGCCAAGGCAGTGGCCGTGCT...TGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTGTCTTCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp TGCCCGCCAGAGCACGGTTGCAGGGGCCATACGCAGGGCCCGTGGCACTGTCACGGAAAGCAAGGGACTTaGGCATTTCTATCGCAACAA +
Preference number: 5 (lower is better)
Translates to: CPPEHGCRGHTQGPWHCHGKQGT*AFLSQQ
Trigger: TTGTTGCGATAGAAATGCCAAAGTCCCTTGCTTTCC...GTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTGCTCTGGCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CAA 90 bp CACGGTTGCAGGGGCCATACGCAGGGCCCGTGGCACTGTCACCATGTGGCAGGTCTCAGGCCCATGTTATaGGAAAGCAAGGGACTTTGG +
Preference number: 5 (lower is better)
Translates to: HGCRGHTQGPWHCHHVAGLRPML*ESKGLW
Trigger: CCAAAGTCCCTTGCTTTCCAATAACATGGGCCTGAG...ACCTGCCACATGGTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS GCA 90 bp CTACAAAGGCCCAGATGGCGCCACTCGCCAACGACAGCCAGCAACTaGGGAGGGAAGCAGAGCCGTTACTTCAACAACCTCGTTCCACCT +
Preference number: 5 (lower is better)
Translates to: LQRPRWRHSPTTASN*GGKQSRYFNNLVPP
Trigger: AGGTGGAACGAGGTTGTTGAAGTAACGGCTCTGCTTCCCTCCGCAGTTGCTGGCTGTCGTTGGCGAGTGGCGCCATCTGGGCCTTTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537489.5
CDS CCA 90 bp TCCACGGTGACCTGGGGCGTGCTGCCGTGCAGGTTGGAGGATACATaGCCCATGACGGTGTCAATAGTGTCGATGAGACTCAGTACCACG +
Preference number: 5 (lower is better)
Translates to: STVTWGVLPCRLEDT*PMTVSIVSMRLSTT
Trigger: CGTGGTACTGAGTCTCATCGACACTATTGACACCGTCATGGGCCATGTATCCTCCAACCTGCACGGCAGCACGCCCCAGGTCACCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
ENST00000544673.5
ENST00000545900.5
CDS-3UTR CAA 90 bp CTGATGACACAGCACAGGTTGGCCCACGCCGGCACCACCTACAGAGACACACACCCGCTGGAGCAGACTTaGAACCCATTGGAGATGACC +
Preference number: 5 (lower is better)
Translates to: LMTQHRLAHAGTTYRDTHPLEQT*NPLEMT
Trigger: GGTCATCTCCAATGGGTTCAAAGTCTGCTCCAGCGG...GTGTGTGTCTCTGTAGGTGGTGCCGGCGTGGGCCAACCTGTGCTGTGTCATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CAA 90 bp CTCCTGTGGCCCAAGAACAACCAAGGAGGCTGGCACACGAGGGAGGAGGGCATCTCCCATGTCATGGAATaGTCCCGCGTATACAGCTCC +
Preference number: 5 (lower is better)
Translates to: LLWPKNNQGGWHTREEGISHVME*SRVYSS
Trigger: GGAGCTGTATACGCGGGACAATTCCATGACATGGGA...GATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTGGGCCACAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CAA 90 bp CGAATTGGGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCAGCACGGCCACTGCCTaGGCTGTCAACTTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: RIGVQRGKTHSGWPRSSPSTATA*AVNLKA
Trigger: TGCCTTCAAGTTGACAGCCAAGGCAGTGGCCGTGCT...GGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCCCAATTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp AAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGACCACAGCACAACCGTaGACAGCAAGCACGCCAAAG +
Preference number: 5 (lower is better)
Translates to: KLTADGREAPPSTGTIRQTTAQP*TASTPK
Trigger: CTTTGGCGTGCTTGCTGTCAACGGTTGTGCTGTGGT...CTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp GCTCAAGGGCACCATCACAGTCAGGCCACTGTGTCCTGGGAATCCCCCGAGGAAGACCAGACCTTGGTTTaGTGCTTGAAGGCGGCTCTC +
Preference number: 5 (lower is better)
Translates to: AQGHHHSQATVSWESPEEDQTLV*CLKAAL
Trigger: GAGAGCCGCCTTCAAGCACAAAACCAAGGTCTGGTC...TTCCTCGGGGGATTCCCAGGACACAGTGGCCTGACTGTGATGGTGCCCTTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGCATCTTAAGGCCGAATaGGGGTCCAAAGAGGCAAAA +
Preference number: 5 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLHLKAE*GSKEAK
Trigger: TTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATG...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp ACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTCAGCTGCGCACACTCTaGCCCCACTTTACAAATGAA +
Preference number: 5 (lower is better)
Translates to: TSPPSPGQWGLSAGRSHGQLRTL*PHFTNE
Trigger: TTCATTTGTAAAGTGGGGCAAGAGTGTGCGCAGCTG...ACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS-3UTR CAA 90 bp CACGGTTGCAGGGGCCATACGCAGGGCCCGTGGCACTGTCACCATGTGGCAGGTGATGTGCGAGGGAGGTaGGGATTTGGAAATATGAGT +
Preference number: 5 (lower is better)
Translates to: HGCRGHTQGPWHCHHVAGDVRGR*GFGNMS
Trigger: ACTCATATTTCCAAATCCCAACCTCCCTCGCACATC...ACCTGCCACATGGTGACAGTGCCACGGGCCCTGCGTATGGCCCCTGCAACCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS GCA 90 bp GTCGGAACCGGAAGTGGAACCCACGCCTTCTGGCCCCAGAGCTCATaGTGCGGACAGGCTCTGTTCGACCTGAAGATTATTGAAGAGTCG +
Preference number: 5 (lower is better)
Translates to: VGTGSGTHAFWPQSS*CGQALFDLKIIEES
Trigger: CGACTCTTCAATAATCTTCAGGTCGAACAGAGCCTGTCCGCAGCATGAGCTCTGGGGCCAGAAGGCGTGGGTTCCACTTCCGGTTCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541937.2
CDS CCA 90 bp GTGCTGCTTACGTGTCAATCTGTGCTTGAGGTGGACCGTAATGAGTaGAGAGCCCGACAGGTTCTGAGACAGGGTGGGTGGTGGGGACAC +
Preference number: 5 (lower is better)
Translates to: VLLTCQSVLEVDRNE*RARQVLRQGGWWGH
Trigger: GTGTCCCCACCACCCACCCTGTCTCAGAACCTGTCGGGCTCTCCACTCATTACGGTCCACCTCAAGCACAGATTGACACGTAAGCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
CDS CCA 90 bp AGCCCTGCCAGGCCGACCCTTTGGAAAAGACATCTGGCTGTAGGGTaGTTTCCAAATGTGGCCATGTTGCTGCCCTACAGGCAGGCGGAT +
Preference number: 5 (lower is better)
Translates to: SPARPTLWKRHLAVG*FPNVAMLLPYRQAD
Trigger: ATCCGCCTGCCTGTAGGGCAGCAACATGGCCACATTTGGAAACCACCCTACAGCCAGATGTCTTTTCCAAAGGGTCGGCCTGGCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS-3UTR CAA 90 bp GGCACTGCGGGGACACGGCCAGCTCCTGTGGCCCAAGAACAACCAAGGAGGCTGTATCACTCCGGGACTTaGGAAGGTTTTTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: GTAGTRPAPVAQEQPRRLYHSGT*EGFSLF
Trigger: GAAGAGAGAAAAACCTTCCAAAGTCCCGGAGTGATA...CAGCCTCCTTGGTTGTTCTTGGGCCACAGGAGCTGGCCGTGTCCCCGCAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CAA 90 bp CGGATGGCCGAGAAGCTCCCCCAAGCACAGGCACCATCAGGCAGCCTCAAGGCCGCTTTTAAGAAGGTCTaGGTGAGATTCAAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: RMAEKLPQAQAPSGSLKAAFKKV*VRFKAV
Trigger: GACAGCCTTGAATCTCACCAAGACCTTCTTAAAAGC...GGCCTTGAGGCTGCCTGATGGTGCCTGTGCTTGGGGGAGCTTCTCGGCCATCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CAA 90 bp ACAACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGTACACGAAGACTCGGTaGCTGCTGTTGGTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: TTPMSRQQQGEGPWAKVGYTKTR*LLLVAS
Trigger: TGAGGCCACCAACAGCAGCAACCGAGTCTTCGTGTA...CCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp GCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCATTTCATTCTGTTTGGGGGGCCTTGGCTGTCAACTaGAAGGCACTGGGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: AARRGSMGKGGAFHSVWGALAVN*KALGSP
Trigger: TGGAGACCCCAGTGCCTTCAAGTTGACAGCCAAGGC...CCCCCAAACAGAATGAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp ACAACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGGTGAGCGACCAGACCTaGGTTTTGTGCTTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: TTPMSRQQQGEGPWAKVGVSDQT*VLCLKA
Trigger: CGCCTTCAAGCACAAAACCAAGGTCTGGTCGCTCAC...CCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp ATGAGGATCTGGCACTGTGGTCCATGTGACCTGGTTTCTGGGGTCACGGGAGCCCAGAGTCAGCGTCTGTaGCTGGCATCCAGACATCTC +
Preference number: 5 (lower is better)
Translates to: MRIWHCGPCDLVSGVTGAQSQRL*LASRHL
Trigger: GAGATGTCTGGATGCCAGCAACAGACGCTGACTCTG...GGCTCCCGTGACCCCAGAAACCAGGTCACATGGACCACAGTGCCAGATCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS TCA 90 bp GGATGCCAACAAGGGAACGTGGTTCGTTTGAACCCGAGCCAGTGGTaGAACAAACTTGCACAAGGGCTTTCTCAGCCCTGCCAGGCCGAC +
Preference number: 5 (lower is better)
Translates to: GCQQGNVVRLNPSQW*NKLAQGLSQPCQAD
Trigger: GTCGGCCTGGCAGGGCTGAGAAAGCCCTTGTGCAAGTTTGTTTCACCACTGGCTCGGGTTCAAACGAACCACGTTCCCTTGTTGGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS GCA 90 bp CCGGCACCCAGAGCTATCTCTGGCTGCCTTGACTTCCCAGGAGCTTaGCTTCTACTCCAAGAGCCCTCTTTCCTTTCTGAGTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: PAPRAISGCLDFPGA*LLLQEPSFLSEFQS
Trigger: GCTCTGGAACTCAGAAAGGAAAGAGGGCTCTTGGAGTAGAAGGCAAGCTCCTGGGAAGTCAAGGCAGCCAGAGATAGCTCTGGGTGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376682.8
CDS GCA 90 bp GGAACCGGAAGTGGAACCCACGCCTTCTGGCCCCAGAGCTCATGCTaGGGACAGGCTCTGTTCGACCTGAAGATTATTGAAGAGTCGAGA +
Preference number: 5 (lower is better)
Translates to: GTGSGTHAFWPQSSC*GQALFDLKIIEESR
Trigger: TCTCGACTCTTCAATAATCTTCAGGTCGAACAGAGCCTGTCCGCAGCATGAGCTCTGGGGCCAGAAGGCGTGGGTTCCACTTCCGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541937.2
CDS-3UTR CAA 90 bp AAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCAGGAGGCCAGCAATTGTTGCTaGTTCCGTAACTGTCCATGG +
Preference number: 5 (lower is better)
Translates to: KGSPLQTCCSLPTLPMQEASNCC*FRNCPW
Trigger: CCATGGACAGTTACGGAACAAGCAACAATTGCTGGC...CTCCTGCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR CAA 90 bp GCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCATTTCATTCTGTTTGGGGGACCACAGCACAACCGTaGACAGCAAGCACGCCAAAG +
Preference number: 5 (lower is better)
Translates to: AARRGSMGKGGAFHSVWGTTAQP*TASTPK
Trigger: CTTTGGCGTGCTTGCTGTCAACGGTTGTGCTGTGGT...CCCCCAAACAGAATGAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp AACACCCATGTCCAGACAGCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCAACCTTGGTTTTGTGCTaGAAGGCGGCTCTCACCTCT +
Preference number: 5 (lower is better)
Translates to: NTHVQTAARRGSMGKGGATLVLC*KAALTS
Trigger: AGAGGTGAGAGCCGCCTTCAAGCACAAAACCAAGGT...TGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGCTGTCTGGACATGGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000335486.10
CDS-3UTR CAA 90 bp TGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAAGTGAGCGACCAGACCTaGGTTTTGTGCTTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: WHTREEGILRPNWGPKRQVSDQT*VLCLKA
Trigger: CGCCTTCAAGCACAAAACCAAGGTCTGGTCGCTCAC...TTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp AATTATCCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACCGGCTCGAGCTCGGCTaGGGCAGGGGCCCCCAACTG +
Preference number: 5 (lower is better)
Translates to: NYPISSGAESESINFPQHRLELG*GRGPQL
Trigger: CAGTTGGGGGCCCCTGCCCAAGCCGAGCTCGAGCCG...GTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGGATAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp GGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGTGAGGGGTCACTGGGCGTaGCGATCAAGGGGTCACTGG +
Preference number: 5 (lower is better)
Translates to: GHRLHRKLTLKQGRHRGVRGHWA*RSRGHW
Trigger: CCAGTGACCCCTTGATCGCAACGCCCAGTGACCCCT...CACACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS TCA 90 bp TCCACGGACCTGCCCTGCGCCTGGTCCTGCTCTGTTTTACATGAGTaGAGTCATTCAATTGCTCAGCCCTTGCCAGCTGCGCACACTCTT +
Preference number: 5 (lower is better)
Translates to: STDLPCAWSCSVLHE*SHSIAQPLPAAHTL
Trigger: AAGAGTGTGCGCAGCTGGCAAGGGCTGAGCAATTGAATGACTTCACTCATGTAAAACAGAGCAGGACCAGGCGCAGGGCAGGTCCGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS TCA 90 bp CTTTTCCACGGACCTGCCCTGCGCCTGGTCCTGCTCTGTTTTACATaGGTGAAGTCATTCAATTGCTCAGCCCTTGCCAGCTGCGCACAC +
Preference number: 5 (lower is better)
Translates to: LFHGPALRLVLLCFT*VKSFNCSALASCAH
Trigger: GTGTGCGCAGCTGGCAAGGGCTGAGCAATTGAATGACTTCACTCATGTAAAACAGAGCAGGACCAGGCGCAGGGCAGGTCCGTGGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS TCA 90 bp CTCCAGTGGCCCCACTCAGTTCCCACACCAGGGCGTGATGGCTGCTaGATTTGGCCGCAAGCGATAGTTCTAATTTTCTGGCTCCAACAC +
Preference number: 5 (lower is better)
Translates to: LQWPHSVPTPGRDGC*IWPQAIVLIFWLQH
Trigger: GTGTTGGAGCCAGAAAATTAGAACTATCGCTTGCGGCCAAATTCAGCAGCCATCACGCCCTGGTGTGGGAACTGAGTGGGGCCACTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS TCA 90 bp TGTGCCGACCTGCTTTTCGAGCCCTCCCCACTCCCGTCCTCATGCTaGGTGTTCCAAGTGGAACGTTTCAGTGCAAGTGTGAACGTGAAG +
Preference number: 5 (lower is better)
Translates to: CADLLFEPSPLPSSC*VFQVERFSASVNVK
Trigger: CTTCACGTTCACACTTGCACTGAAACGTTCCACTTGGAACACTCAGCATGAGGACGGGAGTGGGGAGGGCTCGAAAAGCAGGTCGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS GCA 90 bp CCTCTTTCCTTTCTGAGTTCCAGAGCAGAGGATCCTGGTAGACACTaGCCCCAAGAAAGCAGGGGGCCCTCATCCTCAGACACACATCAC +
Preference number: 5 (lower is better)
Translates to: PLSFLSSRAEDPGRH*PQESRGPSSSDTHH
Trigger: GTGATGTGTGTCTGAGGATGAGGGCCCCCTGCTTTCTTGGGGGCAGTGTCTACCAGGATCCTCTGCTCTGGAACTCAGAAAGGAAAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376682.8
CDS-3UTR CAA 90 bp GGGTCCAAAGAGGCAAAACTCACAGCGGATGGCCGAGAAGCTCCCCCAAGCACAGCCAGCAATTGTTGCTaGTTCCGTAACTGTCCATGG +
Preference number: 5 (lower is better)
Translates to: GSKEAKLTADGREAPPSTASNCC*FRNCPW
Trigger: CCATGGACAGTTACGGAACAAGCAACAATTGCTGGC...TGTGCTTGGGGGAGCTTCTCGGCCATCCGCTGTGAGTTTTGCCTCTTTGGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR CAA 90 bp AGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCTACCCTCCCCATGCATGAGGATGCCAATGTaGACCACGATGACAAACAGG +
Preference number: 5 (lower is better)
Translates to: RAKVHPCRHAAPCLPSPCMRMPM*TTMTNR
Trigger: CCTGTTTGTCATCGTGGTCAACATTGGCATCCTCAT...GCATGGGGAGGGTAGGCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR CAA 90 bp CAAGAACAACCAAGGAGGCTGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAAACCTTGGTTTTGTGCTaGAAGGCGGCTCTCACCTCT +
Preference number: 5 (lower is better)
Translates to: QEQPRRLAHEGGGHLKAETLVLC*KAALTS
Trigger: AGAGGTGAGAGCCGCCTTCAAGCACAAAACCAAGGT...TTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCAGCCTCCTTGGTTGTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000335486.10
CDS-3UTR CAA 90 bp CTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATGAACCTCACATGACACAGCACAGGTaGGCCCACGCCGGCACCACC +
Preference number: 5 (lower is better)
Translates to: LTHISQTPRVLSAQYEPHMTQHR*AHAGTT
Trigger: GGTGGTGCCGGCGTGGGCCAACCTGTGCTGTGTCAT...GTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp GCCTCGCCTGACAGAAGAGCAAAGGTTCACCCCTGCAGACATGCTGCTCCCTGCCATCTTAAGGCCGAATaGGGGTCCAAAGAGGCAAAA +
Preference number: 5 (lower is better)
Translates to: ASPDRRAKVHPCRHAAPCHLKAE*GSKEAK
Trigger: TTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATG...GCAGGGAGCAGCATGTCTGCAGGGGTGAACCTTTGCTCTTCTGTCAGGCGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp ACACAGAAGACACGGCTGTCACCAGCCCTCCCTCTCCAGGTCAGTGGGGACTCACATCTTAAGGCCGAATaGGGGTCCAAAGAGGCAAAA +
Preference number: 5 (lower is better)
Translates to: TQKTRLSPALPLQVSGDSHLKAE*GSKEAK
Trigger: TTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATG...TGAGTCCCCACTGACCTGGAGAGGGAGGGCTGGTGACAGCCGTGTCTTCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS TCA 90 bp GGCACTGGGGTCTCCATGGATCTTGTAGTTGTCGGCGCTGATCTGTaGGATGACTCTGGTCACAGCGATGAGGATGCCAATGTTGACCAC +
Preference number: 5 (lower is better)
Translates to: GTGVSMDLVVVGADL*DDSGHSDEDANVDH
Trigger: GTGGTCAACATTGGCATCCTCATCGCTGTGACCAGAGTCATCTCACAGATCAGCGCCGACAACTACAAGATCCATGGAGACCCCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000446583.6
ENST00000535015.5
ENST00000537489.5
ENST00000543617.2
CDS TCA 90 bp GGCACTGGGGTCTCCATGGATCTTGTAGTTGTCGGCGCTGATCTGTaGGATGACTCTGGTCACAGCGATGAGGATGCCAATGTTGACCTC +
Preference number: 5 (lower is better)
Translates to: GTGVSMDLVVVGADL*DDSGHSDEDANVDL
Trigger: GAGGTCAACATTGGCATCCTCATCGCTGTGACCAGAGTCATCTCACAGATCAGCGCCGACAACTACAAGATCCATGGAGACCCCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335486.10
CDS TCA 90 bp GGCACTGGGGTCTCCATGGATCTTGTAGTTGTCGGCGCTGATCTGTaGGATGACTCTGGTCACAGCGATGAGGATGCCAATGTTGACCAG +
Preference number: 5 (lower is better)
Translates to: GTGVSMDLVVVGADL*DDSGHSDEDANVDQ
Trigger: CTGGTCAACATTGGCATCCTCATCGCTGTGACCAGAGTCATCTCACAGATCAGCGCCGACAACTACAAGATCCATGGAGACCCCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540207.1
CDS GCA 90 bp AGGGAACGTGGTTCGTTTGAACCCGAGCCAGTGGTGAAACAAACTTaGACAAGGGCTTTCTCAGCCCTGCCAGGCCGACCCTTTGGAAAA +
Preference number: 5 (lower is better)
Translates to: RERGSFEPEPVVKQT*TRAFSALPGRPFGK
Trigger: TTTTCCAAAGGGTCGGCCTGGCAGGGCTGAGAAAGCCCTTGTGCAAGTTTGTTTCACCACTGGCTCGGGTTCAAACGAACCACGTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS-3UTR CAA 90 bp CTCCCTCTCCAGGTCAGTGGGGACTCAGCGCAGGTCGGTCTCATGGTGACCAGACCACAATATCTCCAGTaGTATCCTGAAGTTCATGGA +
Preference number: 5 (lower is better)
Translates to: LPLQVSGDSAQVGLMVTRPQYLQ*YPEVHG
Trigger: TCCATGAACTTCAGGATACAACTGGAGATATTGTGG...TCTGGTCACCATGAGACCGACCTGCGCTGAGTCCCCACTGACCTGGAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CAA 90 bp AAGGGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGTGCTGCCGTGCAGGTaGGAGGATACATGGCCCATG +
Preference number: 5 (lower is better)
Translates to: KGHRLHRKLTLKQGRHRGVLPCR*EDTWPM
Trigger: CATGGGCCATGTATCCTCCAACCTGCACGGCAGCAC...ACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CAA 90 bp TGGCACACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAACGTGTCAATCTGTGCTaGAGGTGGACCGTAATGAGT +
Preference number: 5 (lower is better)
Translates to: WHTREEGILRPNWGPKRQRVNLC*RWTVMS
Trigger: ACTCATTACGGTCCACCTCAAGCACAGATTGACACG...TTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGTGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CAA 90 bp GGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGTGAGCACGGCCACTGCCTaGGCTGTCAACTTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: GHRLHRKLTLKQGRHRGVSTATA*AVNLKA
Trigger: TGCCTTCAAGTTGACAGCCAAGGCAGTGGCCGTGCT...CACACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp ACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAAAACTCAGACCAGACCTTGGTTTaGTGCTTGAAGGCGGCTCTC +
Preference number: 5 (lower is better)
Translates to: TREEGILRPNWGPKRQNSDQTLV*CLKAAL
Trigger: GAGAGCCGCCTTCAAGCACAAAACCAAGGTCTGGTC...TGAGTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS TCA 90 bp CTTCCCAGGAGCTTGCCTTCTACTCCAAGAGCCCTCTTTCCTTTCTaGGTTCCAGAGCAGAGGATCCTGGTAGACACTGCCCCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: LPRSLPSTPRALFPF*VPEQRILVDTAPKK
Trigger: TTTCTTGGGGGCAGTGTCTACCAGGATCCTCTGCTCTGGAACTCAGAAAGGAAAGAGGGCTCTTGGAGTAGAAGGCAAGCTCCTGGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376682.8
CDS TCA 90 bp CCTGCCAGCAAGCAGAGCGGACGTACCTCTGAATTCAGGAGACAATaGAAGAGGAATATGAACAGTCCCTGCAGGGAGTTGAGCGTGGCA +
Preference number: 5 (lower is better)
Translates to: PASKQSGRTSEFRRQ*KRNMNSPCRELSVA
Trigger: TGCCACGCTCAACTCCCTGCAGGGACTGTTCATATTCCTCTTTCATTGTCTCCTGAATTCAGAGGTACGTCCGCTCTGCTTGCTGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537489.5
CDS CCA 90 bp ACAAACTTGCACAAGGGCTTTCTCAGCCCTGCCAGGCCGACCCTTTaGAAAAGACATCTGGCTGTAGGGTGGTTTCCAAATGTGGCCATG +
Preference number: 5 (lower is better)
Translates to: TNLHKGFLSPARPTL*KRHLAVGWFPNVAM
Trigger: CATGGCCACATTTGGAAACCACCCTACAGCCAGATGTCTTTTCCAAAGGGTCGGCCTGGCAGGGCTGAGAAAGCCCTTGTGCAAGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS-3UTR CAA 90 bp ACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAAAACTCACAGACTTTGAACCCATaGGAGATGACCTGTCCCCCA +
Preference number: 5 (lower is better)
Translates to: TREEGILRPNWGPKRQNSQTLNP*EMTCPP
Trigger: TGGGGGACAGGTCATCTCCAATGGGTTCAAAGTCTG...TGAGTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CAA 90 bp GGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTGTGGTCTTGGGCAGGATTTaGGCCACGGAAAACTCTGCC +
Preference number: 5 (lower is better)
Translates to: GHRLHRKLTLKQGRHRGVVLGRI*ATENSA
Trigger: GGCAGAGTTTTCCGTGGCCAAAATCCTGCCCAAGAC...CACACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CAA 90 bp GCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCATTTCATTCTGTTTGGGGGATGAGGATGCCAATGTaGACCACGATGACAAACAGG +
Preference number: 5 (lower is better)
Translates to: AARRGSMGKGGAFHSVWGMRMPM*TTMTNR
Trigger: CCTGTTTGTCATCGTGGTCAACATTGGCATCCTCAT...CCCCCAAACAGAATGAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000446583.6
CDS-3UTR CAA 90 bp AAACCAGGTTTGAATGTCTTACCCACATTTCACAGACACCACGAGTGCTATCAGTGGAAGGGCTTCGCGTaGGAGGTGCGGGCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: KPGLNVLPTFHRHHECYQWKGFA*EVRAEL
Trigger: CAGCTCTGCCCGCACCTCCAACGCGAAGCCCTTCCA...CTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAGACATTCAAACCTGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS GCA 90 bp GTGAAGTCATTCAATTGCTCAGCCCTTGCCAGCTGCGCACACTCTTaGCCCACTTTACAAATGAAGCCACGAAGCCACATGGTGGTTGGA +
Preference number: 5 (lower is better)
Translates to: VKSFNCSALASCAHS*PTLQMKPRSHMVVG
Trigger: TCCAACCACCATGTGGCTTCGTGGCTTCATTTGTAAAGTGGGGCAAGAGTGTGCGCAGCTGGCAAGGGCTGAGCAATTGAATGACTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS CCA 90 bp TTGTGCCAGCATGACTGGGATCCACCGACTAAACCAGCACGCATGTaGCATTCTGGCCTCCAAGGAGAACACATCTCTTTCCCTAAGTTC +
Preference number: 5 (lower is better)
Translates to: LCQHDWDPPTKPARM*HSGLQGEHISFPKF
Trigger: GAACTTAGGGAAAGAGATGTGTTCTCCTTGGAGGCCAGAATGCCACATGCGTGCTGGTTTAGTCGGTGGATCCCAGTCATGCTGGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536988.1
CDS-3UTR CAA 90 bp CTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATGAACCTCACGCCTTGGCTGTCAACTaGAAGGCACTGGGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LTHISQTPRVLSAQYEPHALAVN*KALGSP
Trigger: TGGAGACCCCAGTGCCTTCAAGTTGACAGCCAAGGC...GTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS TCA 90 bp CTCGGAGGTCAAAGCTCGGAGCCAAGTGAAATTCCTGAGGGTCTGTaGGAACGGGACCTCTTAACCTTCACTTCCTTGGAAAAGGGACAT +
Preference number: 5 (lower is better)
Translates to: LGGQSSEPSEIPEGL*ERDLLTFTSLEKGH
Trigger: ATGTCCCTTTTCCAAGGAAGTGAAGGTTAAGAGGTCCCGTTCTCACAGACCCTCAGGAATTTCACTTGGCTCCGAGCTTTGACCTCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000541143.5
ENST00000543826.5
CDS TCA 90 bp TCTCATAACACTTGGCCTGGTCCTGCTCAGACCCTATCACGAGGTTaGCGTTGGACTCTCCATAGTCACGAGACACTTTTCCACTCGGAT +
Preference number: 5 (lower is better)
Translates to: SHNTWPGPAQTLSRG*RWTLHSHETLFHSD
Trigger: ATCCGAGTGGAAAAGTGTCTCGTGACTATGGAGAGTCCAACGTCAACCTCGTGATAGGGTCTGAGCAGGACCAGGCCAAGTGTTATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000535015.5
ENST00000537600.2
ENST00000541143.5
ENST00000542091.5
CDS TCA 90 bp GATGGTAGGCATCTGTGGGCATCACGGGGCTTGCTGTGGATGTCATaGAGAGGCTTGGCAGCGTTGAAGACAATAAAGCATGCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: DGRHLWASRGLLWMS*RGLAALKTIKHAFQ
Trigger: TTGGAAAGCATGCTTTATTGTCTTCAACGCTGCCAAGCCTCTTCATGACATCCACAGCAAGCCCCGTGATGCCCACAGATGCCTACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261654.10
ENST00000535015.5
ENST00000537600.2
ENST00000542091.5
CDS GCA 90 bp CCCACTCCCGTCCTCATGCTGAGTGTTCCAAGTGGAACGTTTCAGTaGAAGTGTGAACGTGAAGCTACAGCTGAACTCCTTCTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: PTPVLMLSVPSGTFQ*KCEREATAELLLLL
Trigger: CAAAAGGAGAAGGAGTTCAGCTGTAGCTTCACGTTCACACTTGCACTGAAACGTTCCACTTGGAACACTCAGCATGAGGACGGGAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 90 bp AATATGAACAGTCCCTGCAGGGAGTTGAGCGTGGCAAACATGTACTaGAAAACCACAGCACAACCGTTGACAGCAAGCACGCCAAAGACC +
Preference number: 5 (lower is better)
Translates to: NMNSPCRELSVANMY*KTTAQPLTASTPKT
Trigger: GGTCTTTGGCGTGCTTGCTGTCAACGGTTGTGCTGTGGTTTTCCAGTACATGTTTGCCACGCTCAACTCCCTGCAGGGACTGTTCATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000376682.8
ENST00000446583.6
ENST00000535015.5
ENST00000537489.5
ENST00000540207.1
ENST00000543617.2
CDS CCA 90 bp AGTCCAGGAAGGCGCAGTACACGAAGACTCGGTTGCTGCTGTTGGTaGCCTCACTGTGCTGCTTACGTGTCTGAAATGAAAGAAAGCAAA +
Preference number: 5 (lower is better)
Translates to: SPGRRSTRRLGCCCW*PHCAAYVSEMKESK
Trigger: TTTGCTTTCTTTCATTTCAGACACGTAAGCAGCACAGTGAGGCCACCAACAGCAGCAACCGAGTCTTCGTGTACTGCGCCTTCCTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543617.2
CDS-3UTR CAA 90 bp CTATCAGCACAGTATGAACCTCACAGCCCGTATCTCGGTGGTGTCTTAATTCACTACACGAAGACTCGGTaGCTGCTGTTGGTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: LSAQYEPHSPYLGGVLIHYTKTR*LLLVAS
Trigger: TGAGGCCACCAACAGCAGCAACCGAGTCTTCGTGTA...GTGAATTAAGACACCACCGAGATACGGGCTGTGAGGTTCATACTGTGCTGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp CCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACAGAAGAACCACAGCACAACCGTaGACAGCAAGCACGCCAAAG +
Preference number: 5 (lower is better)
Translates to: PISSGAESESINFPQHRRTTAQP*TASTPK
Trigger: CTTTGGCGTGCTTGCTGTCAACGGTTGTGCTGTGGT...TCTTCTGTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS CCA 90 bp TCCAGTTGTATCCTGAAGTTCATGGATCCCATCCACATTCTCCAGTaGCCAGTAATGGGAAGCAGACGCCAACACCTGAAATCCTGGATG +
Preference number: 5 (lower is better)
Translates to: SSCILKFMDPIHILQ*PVMGSRRQHLKSWM
Trigger: CATCCAGGATTTCAGGTGTTGGCGTCTGCTTCCCATTACTGGCCACTGGAGAATGTGGATGGGATCCATGAACTTCAGGATACAACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000535015.5
ENST00000541143.5
ENST00000542091.5
ENST00000543826.5
CDS-3UTR CAA 90 bp AAGGGCCACAGGCTCCATAGAAAACTCACTCTGAAACAAGGCAGACATAGGGGTTCTCTGAAGAAGGTTTaGTGCGTGGTTTTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: KGHRLHRKLTLKQGRHRGSLKKV*CVVFPW
Trigger: CCAGGGGAAAACCACGCACAAAACCTTCTTCAGAGA...ACCCCTATGTCTGCCTTGTTTCAGAGTGAGTTTTCTATGGAGCCTGTGGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CAA 90 bp AATTATCCCATCTCCTCTGGGGCTGAATCTGAGTCCATAAATTTCCCTCAACACAGTCCCTGCAGGGAGTaGAGCGTGGCAAACATGTAC +
Preference number: 5 (lower is better)
Translates to: NYPISSGAESESINFPQHSPCRE*SVANMY
Trigger: GTACATGTTTGCCACGCTCAACTCCCTGCAGGGACT...GTGTTGAGGGAAATTTATGGACTCAGATTCAGCCCCAGAGGAGATGGGATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000446583.6
CDS-3UTR CAA 90 bp GCAGCAAGGAGAGGGTCCATGGGCAAAGGTGGGGCATTTCATTCTGTTTGGGGGCTAAGACCTTGGATTTaGTCTTGTTTTCATGACTTC +
Preference number: 5 (lower is better)
Translates to: AARRGSMGKGGAFHSVWGLRPWI*SCFHDF
Trigger: GAAGTCATGAAAACAAGACAAAATCCAAGGTCTTAG...CCCCCAAACAGAATGAAATGCCCCACCTTTGCCCATGGACCCTCTCCTTGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS CCA 90 bp ATCATATCGTATGATGATGTGATAATTGTGATATTTGCCAACAGATaGGTTACCAAGCGTGGCGTGGCGACCGCCTCCTGTCCTGGACTT +
Preference number: 5 (lower is better)
Translates to: IISYDDVIIVIFANR*VTKRGVATASCPGL
Trigger: AAGTCCAGGACAGGAGGCGGTCGCCACGCCACGCTTGGTAACCCATCTGTTGGCAAATATCACAATTATCACATCATCATACGATATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS-3UTR CAA 90 bp ACGAGGGAGGAGGGCATCTTAAGGCCGAATTGGGGTCCAAAGAGGCAAAACTCATCCTCGTCTCAAAACTaGAGATTCTTCAGTGATCAA +
Preference number: 5 (lower is better)
Translates to: TREEGILRPNWGPKRQNSSSSQN*RFFSDQ
Trigger: TTGATCACTGAAGAATCTCAAGTTTTGAGACGAGGA...TGAGTTTTGCCTCTTTGGACCCCAATTCGGCCTTAAGATGCCCTCCTCCCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CAA 90 bp AAACCAGGTTTGAATGTCTTACCCACATTTCACAGACACCACGAGTGCTATCAGACCTTGGTTTTGTGCTaGAAGGCGGCTCTCACCTTG +
Preference number: 5 (lower is better)
Translates to: KPGLNVLPTFHRHHECYQTLVLC*KAALTL
Trigger: CAAGGTGAGAGCCGCCTTCAAGCACAAAACCAAGGT...CTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAGACATTCAAACCTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS CCA 90 bp ACTATTACGGGAAGTTACACAAGTATTTGTTCATCTCTATCACCGTaGCTTCAAAGCAGATTGTGTCCACATCTGCTCCCCGATGGCCCT +
Preference number: 5 (lower is better)
Translates to: TITGSYTSICSSLSP*LQSRLCPHLLPDGP
Trigger: AGGGCCATCGGGGAGCAGATGTGGACACAATCTGCTTTGAAGCCACGGTGATAGAGATGAACAAATACTTGTGTAACTTCCCGTAATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 90 bp GAGATTTATCAAGAAAAACTGGAAATCTTCAGGGCCACACTGCTCTaGCTTGCTGATGCAGGAGCTGTTGTACCTGCCGTAATAGAGAAG +
Preference number: 5 (lower is better)
Translates to: EIYQEKLEIFRATLL*LADAGAVVPAVIEK
Trigger: CTTCTCTATTACGGCAGGTACAACAGCTCCTGCATCAGCAAGCCAGAGCAGTGTGGCCCTGAAGATTTCCAGTTTTTCTTGATAAATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541937.2
CDS CCA 90 bp TTTGGCACCAGGGACCGGTTTCATGGAAGACAATTTTTCCATGGATaGGTTGGAGAGGTTGGTTTCGGGATGATTCAAGTGCATTACATT +
Preference number: 5 (lower is better)
Translates to: FGTRDRFHGRQFFHG*VGEVGFGMIQVHYI
Trigger: AATGTAATGCACTTGAATCATCCCGAAACCAACCTCTCCAACCCATCCATGGAAAAATTGTCTTCCATGAAACCGGTCCCTGGTGCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 90 bp CATTTTTGGCACCAGGGACCGGTTTCATGGAAGACAATTTTTCCATaGATGGGTTGGAGAGGTTGGTTTCGGGATGATTCAAGTGCATTA +
Preference number: 5 (lower is better)
Translates to: HFWHQGPVSWKTIFP*MGWRGWFRDDSSAL
Trigger: TAATGCACTTGAATCATCCCGAAACCAACCTCTCCAACCCATCCATGGAAAAATTGTCTTCCATGAAACCGGTCCCTGGTGCCAAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 90 bp AGTGAAGACTGTAAAAATCAGGAGCGAGTAGGATTTACTGTTAACTaGGGTCATAATCGCTCAGAGATCTTTGCTACCACATGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: SEDCKNQERVGFTVN*GHNRSEIFATTWVR
Trigger: CCTGACCCATGTGGTAGCAAAGATCTCTGAGCGATTATGACCCCAGTTAACAGTAAATCCTACTCGCTCCTGATTTTTACAGTCTTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS-3UTR CAA 90 bp CTTACCCACATTTCACAGACACCACGAGTGCTATCAGCACAGTATGAACCTCACTTAACCTTCACTTCCTaGGAAAAGGGACATTTTCAC +
Preference number: 5 (lower is better)
Translates to: LTHISQTPRVLSAQYEPHLTFTS*EKGHFH
Trigger: GTGAAAATGTCCCTTTTCCAAGGAAGTGAAGGTTAA...GTGAGGTTCATACTGTGCTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS-3UTR CAA 90 bp AAACCAGGTTTGAATGTCTTACCCACATTTCACAGACACCACGAGTGCTATCAGACTTTCAGGCCCTCCTaGGATTTCCATGTAAATAGG +
Preference number: 5 (lower is better)
Translates to: KPGLNVLPTFHRHHECYQTFRPS*DFHVNR
Trigger: CCTATTTACATGGAAATCCAAGGAGGGCCTGAAAGT...CTGATAGCACTCGTGGTGTCTGTGAAATGTGGGTAAGACATTCAAACCTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261654.10
CDS TCA 90 bp AATTGTTGCTTGTTCCGTAACTGTCCATGGCAAATGACAGTGAAATaGTGCAGATCAGAAGAGGAAAACCCCATCCCATCCCATAGTAGT +
Preference number: 5 (lower is better)
Translates to: NCCLFRNCPWQMTVK*CRSEEENPIPSHSS
Trigger: ACTACTATGGGATGGGATGGGGTTTTCCTCTTCTGATCTGCATCATTTCACTGTCATTTGCCATGGACAGTTACGGAACAAGCAACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000446583.6
ENST00000535015.5
ENST00000543617.2
CDS GCA 90 bp CCCAGTCCTTTGGAGCACAGGAAGGATGTTATCTTTTTGTCCTTATaGCCTAAATTCCAGAAGCAGTTCAAGGAGACTCCTTGTTATTTT +
Preference number: 5 (lower is better)
Translates to: PSPLEHRKDVIFLSL*PKFQKQFKETPCYF
Trigger: AAAATAACAAGGAGTCTCCTTGAACTGCTTCTGGAATTTAGGGCATAAGGACAAAAAGATAACATCCTTCCTGTGCTCCAAAGGACTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537600.2
CDS CCA 90 bp ACACTGAATTTTCTCAGGCCCATGTTATTGGAAAGCAAGGGACTTTaGCATTTCTATCGCAACAAGGCGACCTGTATTCTTTCATACATG +
Preference number: 5 (lower is better)
Translates to: TLNFLRPMLLESKGL*HFYRNKATCILSYM
Trigger: CATGTATGAAAGAATACAGGTCGCCTTGTTGCGATAGAAATGCCAAAGTCCCTTGCTTTCCAATAACATGGGCCTGAGAAAATTCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS TCA 90 bp CTAGGATTGCTGTACGGTAAACCCTCGCCGCCCATGTCAGCCATCTaGCATGATCAAGAGCAATCAGTAAATAAAAATAAAAATGGAAAA +
Preference number: 5 (lower is better)
Translates to: LGLLYGKPSPPMSAI*HDQEQSVNKNKNGK
Trigger: TTTTCCATTTTTATTTTTATTTACTGATTGCTCTTGATCATGTCAGATGGCTGACATGGGCGGCGAGGGTTTACCGTACAGCAATCCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 90 bp CCGGTTTCATGGAAGACAATTTTTCCATGGATGGGTTGGAGAGGTTaGTTTCGGGATGATTCAAGTGCATTACATTTATTGTGCACTTTA +
Preference number: 5 (lower is better)
Translates to: PVSWKTIFPWMGWRG*FRDDSSALHLLCTL
Trigger: TAAAGTGCACAATAAATGTAATGCACTTGAATCATCCCGAAACCAACCTCTCCAACCCATCCATGGAAAAATTGTCTTCCATGAAACCGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 90 bp GGAGAAAATTTCTGTCTCCTTAAAGTTTGTGAAACACAGCTGTCTTaGAGACCTAATGGGTGTTTCTTCCTCGTCTCAAAACTTGAGATT +
Preference number: 5 (lower is better)
Translates to: GENFCLLKVCETQLS*RPNGCFFLVSKLEI
Trigger: AATCTCAAGTTTTGAGACGAGGAAGAAACACCCATTAGGTCTCCAAGACAGCTGTGTTTCACAAACTTTAAGGAGACAGAAATTTTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000541143.5
ENST00000543826.5
CDS TCA 90 bp TACTTGCTCTCCAAAGCCTTCTATAATCGTCCATCACATATACCTTaGAACCCCGTGATGATCAACAGAACAATATTCATCTCAAAGCAT +
Preference number: 5 (lower is better)
Translates to: YLLSKAFYNRPSHIP*NPVMINRTIFISKH
Trigger: ATGCTTTGAGATGAATATTGTTCTGTTGATCATCACGGGGTTTCAAGGTATATGTGATGGACGATTATAGAAGGCTTTGGAGAGCAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS GCA 72 bp GTGGGCGGGCGGGCTTCCATGGCTGCACTGCCTTCCTaGCACCGGGATCCACCTCAGGCCTTGCAAGGGGTC +
Preference number: 6 (lower is better)
Translates to: VGGRASMAALPS*HRDPPQALQGV
Trigger: GACCCCTTGCAAGGCCTGAGGTGGATCCCGGTGGCAGGAAGGCAGTGCAGCCATGGAAGCCCGCCCGCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS GCA 72 bp GCGTGGCACCCACGCAGGTGCCCTTCACGGAGCGCGTaGTCCTCAACGGCGCCCCAGTCTGAGAACACCAGC +
Preference number: 6 (lower is better)
Translates to: AWHPRRCPSRSA*SSTAPQSENTS
Trigger: GCTGGTGTTCTCAGACTGGGGCGCCGTTGAGGAGCACGCGCTCCGTGAAGGGCACCTGCGTGGGTGCCACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS TCA 72 bp TCCGGATGGTGCTCACGGAGGACAGCACGGCGAAGGTaGCCAGCGTGGCCACCAGGCAGAGCACGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: SGWCSRRTARRR*PAWPPGRARRG
Trigger: CCCTCTCCGTGCTCTGCCTGGTGGCCACGCTGGTCACCTTCGCCGTGCTGTCCTCCGTGAGCACCATCCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000446583.6
ENST00000535015.5
ENST00000536988.1
ENST00000543617.2
CDS GCA 72 bp GCGTGGCGTGGCGACCGCCTCCTGTCCTGGACTTTGTaGCGACCTGCTTTTCGAGCCCTCCCCACTCCCGTC +
Preference number: 6 (lower is better)
Translates to: AWRGDRLLSWTL*RPAFRALPTPV
Trigger: GACGGGAGTGGGGAGGGCTCGAAAAGCAGGTCGGCACAAAGTCCAGGACAGGAGGCGGTCGCCACGCCACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 72 bp GCAGGACCTGGGCCACCAGCACGGCGAAGGACAGGTTaGCGTGGATGTGGTAGCGCTGGTTCCGGATGGTGC +
Preference number: 6 (lower is better)
Translates to: AGPGPPARRRTG*RGCGSAGSGWC
Trigger: GCACCATCCGGAACCAGCGCTACCACATCCACGCCAACCTGTCCTTCGCCGTGCTGGTGGCCCAGGTCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000446583.6
ENST00000535015.5
ENST00000536988.1
ENST00000543617.2
CDS CCA 72 bp CCCGGCTCGAGGCGGAAACTAATGAGCAGCAGGACCTaGGCCACCAGCACGGCGAAGGACAGGTTGGCGTGG +
Preference number: 6 (lower is better)
Translates to: PGSRRKLMSSRT*ATSTAKDRLAW
Trigger: CCACGCCAACCTGTCCTTCGCCGTGCTGGTGGCCCAGGTCCTGCTGCTCATTAGTTTCCGCCTCGAGCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000446583.6
ENST00000535015.5
ENST00000536988.1
ENST00000543617.2
CDS CAA 72 bp CAAGCGTGGCGTGGCGACCGCCTCCTGTCCTGGACTTaGTGCCGACCTGCTTTTCGAGCCCTCCCCACTCCC +
Preference number: 6 (lower is better)
Translates to: QAWRGDRLLSWT*CRPAFRALPTP
Trigger: GGGAGTGGGGAGGGCTCGAAAAGCAGGTCGGCACAAAGTCCAGGACAGGAGGCGGTCGCCACGCCACGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS TCA 72 bp TCGCAGTCCTGGGAAAGCAATCCCAGGTCACCACTGTaGCCGCGACCTGCGCCCGGGGACGGGAGGCTGTTT +
Preference number: 6 (lower is better)
Translates to: SQSWESNPRSPL*PRPAPGDGRLF
Trigger: AAACAGCCTCCCGTCCCCGGGCGCAGGTCGCGGTCACAGTGGTGACCTGGGATTGCTTTCCCAGGACTGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000541143.5
ENST00000543826.5
CDS TCA 72 bp ATCAGGTGGCTGGTGGCGAACAGCAGGCAGTCCTGGTaGTGCATGGCCTCCGCGATCTTGGTGTGGGCGGGC +
Preference number: 6 (lower is better)
Translates to: IRWLVANSRQSW*CMASAILVWAG
Trigger: GCCCGCCCACACCAAGATCGCGGAGGCCATGCATCACCAGGACTGCCTGCTGTTCGCCACCAGCCACCTGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
ENST00000545900.5
CDS GCA 72 bp GGAAAGCAATCCCAGGTCACCACTGTGACCGCGACCTaGGCCCGGGGACGGGAGGCTGTTTGTCCTGCGGTA +
Preference number: 6 (lower is better)
Translates to: GKQSQVTTVTAT*ARGREAVCPAV
Trigger: TACCGCAGGACAAACAGCCTCCCGTCCCCGGGCGCAGGTCGCGGTCACAGTGGTGACCTGGGATTGCTTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000541143.5
ENST00000543826.5
CDS GCA 72 bp GAGGAGCCCTCCACGGTGACCTGGGGCGTGCTGCCGTaGAGGTTGGAGGATACATGGCCCATGACGGTGTCA +
Preference number: 6 (lower is better)
Translates to: EEPSTVTWGVLP*RLEDTWPMTVS
Trigger: TGACACCGTCATGGGCCATGTATCCTCCAACCTGCACGGCAGCACGCCCCAGGTCACCGTGGAGGGCTCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
ENST00000544673.5
ENST00000545900.5
CDS CCA 72 bp GGCTGGTGGCGAACAGCAGGCAGTCCTGGTGATGCATaGCCTCCGCGATCTTGGTGTGGGCGGGCCAGATGT +
Preference number: 6 (lower is better)
Translates to: GWWRTAGSPGDA*PPRSWCGRARC
Trigger: ACATCTGGCCCGCCCACACCAAGATCGCGGAGGCCATGCATCACCAGGACTGCCTGCTGTTCGCCACCAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
ENST00000545900.5
CDS CCA 72 bp GGTTACCAAGCGTGGCGTGGCGACCGCCTCCTGTCCTaGACTTTGTGCCGACCTGCTTTTCGAGCCCTCCCC +
Preference number: 6 (lower is better)
Translates to: GYQAWRGDRLLS*TLCRPAFRALP
Trigger: GGGGAGGGCTCGAAAAGCAGGTCGGCACAAAGTCCAGGACAGGAGGCGGTCGCCACGCCACGCTTGGTAACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CAA 72 bp GCACTGCCTTCCTGCCACCGGGATCCACCTCAGGCCTaGCAAGGGGTCACTGGGCGTTGCGATCAAGGGGTC +
Preference number: 6 (lower is better)
Translates to: ALPSCHRDPPQA*QGVTGRCDQGV
Trigger: GACCCCTTGATCGCAACGCCCAGTGACCCCTTGCAAGGCCTGAGGTGGATCCCGGTGGCAGGAAGGCAGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS TCA 72 bp CGGAAAACTCTGCCATGGCAGAGGAGCCCTCCACGGTaGCCTGGGGCGTGCTGCCGTGCAGGTTGGAGGATA +
Preference number: 6 (lower is better)
Translates to: RKTLPWQRSPPR*PGACCRAGWRI
Trigger: TATCCTCCAACCTGCACGGCAGCACGCCCCAGGTCACCGTGGAGGGCTCCTCTGCCATGGCAGAGTTTTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
ENST00000544673.5
ENST00000545900.5
CDS TCA 72 bp TTCACGGAGCGCGTGCTCCTCAACGGCGCCCCAGTCTaGGAACACCAGCAACAGAGGCAGCACCGATGGGTC +
Preference number: 6 (lower is better)
Translates to: FTERVLLNGAPV*EHQQQRQHRWV
Trigger: GACCCATCGGTGCTGCCTCTGTTGCTGGTGTTCTCAGACTGGGGCGCCGTTGAGGAGCACGCGCTCCGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS GCA 72 bp CCACGAGGTACCCAGGATGGGCAGCAGCACGGCCACTaGCTTGGCTGTCAACTTGAAGGCACTGGGGTCTCC +
Preference number: 6 (lower is better)
Translates to: PRGTQDGQQHGH*LGCQLEGTGVS
Trigger: GGAGACCCCAGTGCCTTCAAGTTGACAGCCAAGGCAGTGGCCGTGCTGCTGCCCATCCTGGGTACCTCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000376682.8
ENST00000446583.6
ENST00000535015.5
ENST00000537489.5
ENST00000540207.1
ENST00000543617.2
CDS GCA 72 bp CACTGCCTTCCTGCCACCGGGATCCACCTCAGGCCTTaGAAGGGGTCACTGGGCGTTGCGATCAAGGGGTCA +
Preference number: 6 (lower is better)
Translates to: HCLPATGIHLRP*KGSLGVAIKGS
Trigger: TGACCCCTTGATCGCAACGCCCAGTGACCCCTTGCAAGGCCTGAGGTGGATCCCGGTGGCAGGAAGGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS GCA 72 bp TGGCGACCGCCTCCTGTCCTGGACTTTGTGCCGACCTaGTTTTCGAGCCCTCCCCACTCCCGTCCTCATGCT +
Preference number: 6 (lower is better)
Translates to: WRPPPVLDFVPT*FSSPPHSRPHA
Trigger: AGCATGAGGACGGGAGTGGGGAGGGCTCGAAAAGCAGGTCGGCACAAAGTCCAGGACAGGAGGCGGTCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 72 bp CTCGGGCTTGTCCTGCGGCCGCTCTCGAGCTCCTTCTaGTCTGGCTCAAGTTCACACCTCCGTCCTGCTCTC +
Preference number: 6 (lower is better)
Translates to: LGLVLRPLSSSF*SGSSSHLRPAL
Trigger: GAGAGCAGGACGGAGGTGTGAACTTGAGCCAGACCAGAAGGAGCTCGAGAGCGGCCGCAGGACAAGCCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000541143.5
CDS CCA 72 bp AACTCTGCCATGGCAGAGGAGCCCTCCACGGTGACCTaGGGCGTGCTGCCGTGCAGGTTGGAGGATACATGG +
Preference number: 6 (lower is better)
Translates to: NSAMAEEPSTVT*GVLPCRLEDTW
Trigger: CCATGTATCCTCCAACCTGCACGGCAGCACGCCCCAGGTCACCGTGGAGGGCTCCTCTGCCATGGCAGAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
ENST00000544673.5
ENST00000545900.5
CDS CCA 72 bp GCAAATAAACAAATGCGTGGTGGGCAGGCAGGCGGGTaGGCGGGCGGGCTTCCATGGCTGCACTGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: ANKQMRGGQAGG*AGGLPWLHCLP
Trigger: AGGAAGGCAGTGCAGCCATGGAAGCCCGCCCGCCCACCCGCCTGCCTGCCCACCACGCATTTGTTTATTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS CAA 90 bp TCCATGGCTGCACTGCCTTCCTGCCACCGGGATCCACCTCAGGCCTaGCAAGGGGTCACTGGGCGTTGCGATCAAGGGGTCACTGGGCTT +
Preference number: 6 (lower is better)
Translates to: SMAALPSCHRDPPQA*QGVTGRCDQGVTGL
Trigger: AAGCCCAGTGACCCCTTGATCGCAACGCCCAGTGACCCCTTGCAAGGCCTGAGGTGGATCCCGGTGGCAGGAAGGCAGTGCAGCCATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS CAA 90 bp ATGGGTTACCAAGCGTGGCGTGGCGACCGCCTCCTGTCCTGGACTTaGTGCCGACCTGCTTTTCGAGCCCTCCCCACTCCCGTCCTCATG +
Preference number: 6 (lower is better)
Translates to: MGYQAWRGDRLLSWT*CRPAFRALPTPVLM
Trigger: CATGAGGACGGGAGTGGGGAGGGCTCGAAAAGCAGGTCGGCACAAAGTCCAGGACAGGAGGCGGTCGCCACGCCACGCTTGGTAACCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS TCA 72 bp CACTGGGCGTTGCGATCAAGGGGTCACTGGGCTTTGTaGTCATGCAGCCCTTCTGCCCGGCCACCATCCTGC +
Preference number: 6 (lower is better)
Translates to: HWALRSRGHWAL*SCSPSARPPSC
Trigger: GCAGGATGGTGGCCGGGCAGAAGGGCTGCATGATCACAAAGCCCAGTGACCCCTTGATCGCAACGCCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS GCA 72 bp ACCAGCAGCTCTGTCCCCTTCTCCATGAAGGGTGGCTaGTTCCGAGGTGCCGGCACCCAGAGCTATCTCTGG +
Preference number: 6 (lower is better)
Translates to: TSSSVPFSMKGG*FRGAGTQSYLW
Trigger: CCAGAGATAGCTCTGGGTGCCGGCACCTCGGAAGCAGCCACCCTTCATGGAGAAGGGGACAGAGCTGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376682.8
CDS CCA 72 bp GCTTGTCCTGCGGCCGCTCTCGAGCTCCTTCTGGTCTaGCTCAAGTTCACACCTCCGTCCTGCTCTCTGGGT +
Preference number: 6 (lower is better)
Translates to: ACPAAALELLLV*LKFTPPSCSLG
Trigger: ACCCAGAGAGCAGGACGGAGGTGTGAACTTGAGCCAGACCAGAAGGAGCTCGAGAGCGGCCGCAGGACAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261654.10
ENST00000541143.5
CDS CAA 72 bp CCCTCCACGGTGACCTGGGGCGTGCTGCCGTGCAGGTaGGAGGATACATGGCCCATGACGGTGTCAATAGTG +
Preference number: 6 (lower is better)
Translates to: PSTVTWGVLPCR*EDTWPMTVSIV
Trigger: CACTATTGACACCGTCATGGGCCATGTATCCTCCAACCTGCACGGCAGCACGCCCCAGGTCACCGTGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
ENST00000544673.5
ENST00000545900.5
CDS CAA 72 bp CCCACGGAACAGGGACGACCGAAGCACGTGCTAGGATaGCTGTACGGTAAACCCTCGCCGCCCATGTCAGCC +
Preference number: 6 (lower is better)
Translates to: PTEQGRPKHVLG*LYGKPSPPMSA
Trigger: GGCTGACATGGGCGGCGAGGGTTTACCGTACAGCAATCCTAGCACGTGCTTCGGTCGTCCCTGTTCCGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CAA 72 bp CCTCACATCCCCCAGCCTCCACCACCCTTGTTTACTTaGGTCAGCAGCTCGGCCACTCCAGTGGCCCCACTC +
Preference number: 6 (lower is better)
Translates to: PHIPQPPPPLFT*VSSSATPVAPL
Trigger: GAGTGGGGCCACTGGAGTGGCCGAGCTGCTGACCAAAGTAAACAAGGGTGGTGGAGGCTGGGGGATGTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CAA 90 bp GCAGAGGAGCCCTCCACGGTGACCTGGGGCGTGCTGCCGTGCAGGTaGGAGGATACATGGCCCATGACGGTGTCAATAGTGTCGATGAGA +
Preference number: 6 (lower is better)
Translates to: AEEPSTVTWGVLPCR*EDTWPMTVSIVSMR
Trigger: TCTCATCGACACTATTGACACCGTCATGGGCCATGTATCCTCCAACCTGCACGGCAGCACGCCCCAGGTCACCGTGGAGGGCTCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
ENST00000544673.5
ENST00000545900.5
CDS CAA 90 bp CTCTTCGGACCTCACATCCCCCAGCCTCCACCACCCTTGTTTACTTaGGTCAGCAGCTCGGCCACTCCAGTGGCCCCACTCAGTTCCCAC +
Preference number: 6 (lower is better)
Translates to: LFGPHIPQPPPPLFT*VSSSATPVAPLSSH
Trigger: GTGGGAACTGAGTGGGGCCACTGGAGTGGCCGAGCTGCTGACCAAAGTAAACAAGGGTGGTGGAGGCTGGGGGATGTGAGGTCCGAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CAA 90 bp CCAGCTGGCCGCAAATCCCGAGGGGCACTGCCCCGTCCAATCATCTaGTGTCCCGTTCCCATGGCCAGGGTATCTGATGGTGAGTGTGTG +
Preference number: 6 (lower is better)
Translates to: PAGRKSRGALPRPII*CPVPMARVSDGECV
Trigger: CACACACTCACCATCAGATACCCTGGCCATGGGAACGGGACACAAGATGATTGGACGGGGCAGTGCCCCTCGGGATTTGCGGCCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS GCA 72 bp CCCAGATGGCGCCACTCGCCAACGACAGCCAGCAACTaGGGAGGGAAGCAGAGCCGTTACTTCAACAACCTC +
Preference number: 6 (lower is better)
Translates to: PRWRHSPTTASN*GGKQSRYFNNL
Trigger: GAGGTTGTTGAAGTAACGGCTCTGCTTCCCTCCGCAGTTGCTGGCTGTCGTTGGCGAGTGGCGCCATCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537489.5
CDS CAA 72 bp CCGAGGTGCCGGCACCCAGAGCTATCTCTGGCTGCCTaGACTTCCCAGGAGCTTGCCTTCTACTCCAAGAGC +
Preference number: 6 (lower is better)
Translates to: PRCRHPELSLAA*TSQELAFYSKS
Trigger: GCTCTTGGAGTAGAAGGCAAGCTCCTGGGAAGTCAAGGCAGCCAGAGATAGCTCTGGGTGCCGGCACCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376682.8
CDS CAA 90 bp CTGGACTTTCTCTTCGGACCTCACATCCCCCAGCCTCCACCACCCTaGTTTACTTTGGTCAGCAGCTCGGCCACTCCAGTGGCCCCACTC +
Preference number: 6 (lower is better)
Translates to: LDFLFGPHIPQPPPP*FTLVSSSATPVAPL
Trigger: GAGTGGGGCCACTGGAGTGGCCGAGCTGCTGACCAAAGTAAACAAGGGTGGTGGAGGCTGGGGGATGTGAGGTCCGAAGAGAAAGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS GCA 72 bp TGTGGGCGGGCCAGATGTTGTTCAGGTAGTAGTGCATaGTGTGGTACAGCAGACCCACGACGGTGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: CGRARCCSGSSA*CGTADPRRCSR
Trigger: CCTGGAGCACCGTCGTGGGTCTGCTGTACCACAGCATGCACTACTACCTGAACAACATCTGGCCCGCCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
ENST00000544673.5
ENST00000545900.5
CDS GCA 72 bp ACGAAGACTCGGTTGCTGCTGTTGGTGGCCTCACTGTaGTGCTTACGTGTCCGACTCTCCAGGACGTCCCGT +
Preference number: 6 (lower is better)
Translates to: TKTRLLLLVASL*CLRVRLSRTSR
Trigger: ACGGGACGTCCTGGAGAGTCGGACACGTAAGCAGCACAGTGAGGCCACCAACAGCAGCAACCGAGTCTTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335486.10
ENST00000446583.6
CDS GCA 72 bp CCTGCTCCTGTGACCTTTCGGAAAGGAAAAGCCAGCTaGACCTGCACCTGCCAGCAAGCAGAGCGGACGTAC +
Preference number: 6 (lower is better)
Translates to: PAPVTFRKGKAS*TCTCQQAERTY
Trigger: GTACGTCCGCTCTGCTTGCTGGCAGGTGCAGGTGCAGCTGGCTTTTCCTTTCCGAAAGGTCACAGGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537489.5
CDS CCA 72 bp AGGCACCAGGAGGGGCTCTTTCATCCAAGAGCACCCTaGACTTTCTCTTCGGACCTCACATCCCCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: RHQEGLFHPRAP*TFSSDLTSPSL
Trigger: GAGGCTGGGGGATGTGAGGTCCGAAGAGAAAGTCCAGGGTGCTCTTGGATGAAAGAGCCCCTCCTGGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CAA 72 bp CTCTTCGGACCTCACATCCCCCAGCCTCCACCACCCTaGTTTACTTTGGTCAGCAGCTCGGCCACTCCAGTG +
Preference number: 6 (lower is better)
Translates to: LFGPHIPQPPPP*FTLVSSSATPV
Trigger: CACTGGAGTGGCCGAGCTGCTGACCAAAGTAAACAAGGGTGGTGGAGGCTGGGGGATGTGAGGTCCGAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CAA 72 bp CGCAAATCCCGAGGGGCACTGCCCCGTCCAATCATCTaGTGTCCCGTTCCCATGGCCAGGGTATCTGATGGT +
Preference number: 6 (lower is better)
Translates to: RKSRGALPRPII*CPVPMARVSDG
Trigger: ACCATCAGATACCCTGGCCATGGGAACGGGACACAAGATGATTGGACGGGGCAGTGCCCCTCGGGATTTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CAA 90 bp CTGAAGTCCAGGAAGGCGCAGTACACGAAGACTCGGTTGCTGCTGTaGGTGGCCTCACTGTGCTGCTTACGTGTCCGACTCTCCAGGACG +
Preference number: 6 (lower is better)
Translates to: LKSRKAQYTKTRLLL*VASLCCLRVRLSRT
Trigger: CGTCCTGGAGAGTCGGACACGTAAGCAGCACAGTGAGGCCACCAACAGCAGCAACCGAGTCTTCGTGTACTGCGCCTTCCTGGACTTCAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335486.10
ENST00000446583.6
CDS CAA 90 bp TCTCCGGAGCTGAAGTCCAGGAAGGCGCAGTACACGAAGACTCGGTaGCTGCTGTTGGTGGCCTCACTGTGCTGCTTACGTGTCCGACTC +
Preference number: 6 (lower is better)
Translates to: SPELKSRKAQYTKTR*LLLVASLCCLRVRL
Trigger: GAGTCGGACACGTAAGCAGCACAGTGAGGCCACCAACAGCAGCAACCGAGTCTTCGTGTACTGCGCCTTCCTGGACTTCAGCTCCGGAGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335486.10
ENST00000446583.6
CDS CAA 90 bp TCCAACCAGGCAGTAGAAGGATCTCTCCCACGGCTTTTAAGAAGGTaGCATACCAAGCCCTGTCTCGGGGCCTCACGCCCGGTCCTGTGC +
Preference number: 6 (lower is better)
Translates to: SNQAVEGSLPRLLRR*HTKPCLGASRPVLC
Trigger: GCACAGGACCGGGCGTGAGGCCCCGAGACAGGGCTTGGTATGCAACCTTCTTAAAAGCCGTGGGAGAGATCCTTCTACTGCCTGGTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545900.5
CDS GCA 72 bp AGTCCAGGAAGGCGCAGTACACGAAGACTCGGTTGCTaGTGTTGGTGGCCTCACTGTGCTGCTTACGTGTCC +
Preference number: 6 (lower is better)
Translates to: SPGRRSTRRLGC*CWWPHCAAYVS
Trigger: GGACACGTAAGCAGCACAGTGAGGCCACCAACAGCAGCAACCGAGTCTTCGTGTACTGCGCCTTCCTGGACT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335486.10
ENST00000446583.6
CDS GCA 72 bp TGTCCGCGTGCAAGCTGCGGCAGTACAGACCAGTTGTaGCAGCATGACTGGGATCCACCGACTAAACCAGCA +
Preference number: 6 (lower is better)
Translates to: CPRASCGSTDQL*QHDWDPPTKPA
Trigger: TGCTGGTTTAGTCGGTGGATCCCAGTCATGCTGGCACAACTGGTCTGTACTGCCGCAGCTTGCACGCGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536988.1
CDS GCA 72 bp GGTTCGTTTGAACCCGAGCCAGTGGTGAAACAAACTTaGACAAGGGCTTTCTCAGCCCTGCCAGGCCGACCC +
Preference number: 6 (lower is better)
Translates to: GSFEPEPVVKQT*TRAFSALPGRP
Trigger: GGGTCGGCCTGGCAGGGCTGAGAAAGCCCTTGTGCAAGTTTGTTTCACCACTGGCTCGGGTTCAAACGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 72 bp ACCTGGGGCGTGCTGCCGTGCAGGTTGGAGGATACATaGCCCATGACGGTGTCAATAGTGTCGATGAGACTC +
Preference number: 6 (lower is better)
Translates to: TWGVLPCRLEDT*PMTVSIVSMRL
Trigger: GAGTCTCATCGACACTATTGACACCGTCATGGGCCATGTATCCTCCAACCTGCACGGCAGCACGCCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
ENST00000544673.5
ENST00000545900.5
CDS CAA 72 bp CGGGCAGAGCTGCTCGTGAGCGACCAGACCTTGGTTTaGTGCTTGAAGGCGGCTCTCACCTCTGAATTCAGG +
Preference number: 6 (lower is better)
Translates to: RAELLVSDQTLV*CLKAALTSEFR
Trigger: CCTGAATTCAGAGGTGAGAGCCGCCTTCAAGCACAAAACCAAGGTCTGGTCGCTCACGAGCAGCTCTGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000376682.8
ENST00000535015.5
ENST00000540207.1
ENST00000543617.2
CDS CAA 72 bp TGGTGTCCGCGTGCAAGCTGCGGCAGTACAGACCAGTaGTGCCAGCATGACTGGGATCCACCGACTAAACCA +
Preference number: 6 (lower is better)
Translates to: WCPRASCGSTDQ*CQHDWDPPTKP
Trigger: TGGTTTAGTCGGTGGATCCCAGTCATGCTGGCACAACTGGTCTGTACTGCCGCAGCTTGCACGCGGACACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536988.1
CDS CAA 72 bp GCAGTAGAAGGATCTCTCCCACGGCTTTTAAGAAGGTaGCATACCAAGCCCTGTCTCGGGGCCTCACGCCCG +
Preference number: 6 (lower is better)
Translates to: AVEGSLPRLLRR*HTKPCLGASRP
Trigger: CGGGCGTGAGGCCCCGAGACAGGGCTTGGTATGCAACCTTCTTAAAAGCCGTGGGAGAGATCCTTCTACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545900.5
CDS CAA 90 bp AGCTCCACAGAGCCTCTGCCACCGCTGGAGCAGACTTTGAACCCATaGGAGATGACCTGTCCCCCATACGCAGAAGGGATTGGTCTAGAC +
Preference number: 6 (lower is better)
Translates to: SSTEPLPPLEQTLNP*EMTCPPYAEGIGLD
Trigger: GTCTAGACCAATCCCTTCTGCGTATGGGGGACAGGTCATCTCCAATGGGTTCAAAGTCTGCTCCAGCGGTGGCAGAGGCTCTGTGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000535015.5
ENST00000541143.5
CDS CAA 90 bp CGCGTATACAGCTCCACAGAGCCTCTGCCACCGCTGGAGCAGACTTaGAACCCATTGGAGATGACCTGTCCCCCATACGCAGAAGGGATT +
Preference number: 6 (lower is better)
Translates to: RVYSSTEPLPPLEQT*NPLEMTCPPYAEGI
Trigger: AATCCCTTCTGCGTATGGGGGACAGGTCATCTCCAATGGGTTCAAAGTCTGCTCCAGCGGTGGCAGAGGCTCTGTGGAGCTGTATACGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000535015.5
ENST00000541143.5
CDS CAA 90 bp TCTCCGGAGCTGAAGTCCAGGAAGGCGCAGTACACGAAGACTCGGTaGCTGCTGTTGGTGGCCTCACTGTGCTGCTTACGTGTCAATCTG +
Preference number: 6 (lower is better)
Translates to: SPELKSRKAQYTKTR*LLLVASLCCLRVNL
Trigger: CAGATTGACACGTAAGCAGCACAGTGAGGCCACCAACAGCAGCAACCGAGTCTTCGTGTACTGCGCCTTCCTGGACTTCAGCTCCGGAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
CDS CAA 90 bp TGGAAAAGACATCTGGCTGTAGGGTGGTTTCCAAATGTGGCCATGTaGCTGCCCTACAGGCAGGCGGATGAGAGCGATGCTGGGCAGGGA +
Preference number: 6 (lower is better)
Translates to: WKRHLAVGWFPNVAM*LPYRQADESDAGQG
Trigger: TCCCTGCCCAGCATCGCTCTCATCCGCCTGCCTGTAGGGCAGCAACATGGCCACATTTGGAAACCACCCTACAGCCAGATGTCTTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS GCA 72 bp AGTCCAGGAAGGCGCAGTACACGAAGACTCGGTTGCTaGTGTTGGTGGCCTCACTGTGCTGCTTACGTGTCA +
Preference number: 6 (lower is better)
Translates to: SPGRRSTRRLGC*CWWPHCAAYVS
Trigger: TGACACGTAAGCAGCACAGTGAGGCCACCAACAGCAGCAACCGAGTCTTCGTGTACTGCGCCTTCCTGGACT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
CDS GCA 72 bp AGCTTCACTCACTCACCCACCACTCACTTCCTGCTGTaGAGCCCAGTTCCTAACAGGCTACGGATTGCTGCC +
Preference number: 6 (lower is better)
Translates to: SFTHSPTTHFLL*SPVPNRLRIAA
Trigger: GGCAGCAATCCGTAGCCTGTTAGGAACTGGGCTGCACAGCAGGAAGTGAGTGGTGGGTGAGTGAGTGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS GCA 72 bp AGTCCAGGAAGGCGCAGTACACGAAGACTCGGTTGCTaGTGTTGGTGGCCTCACTGTGCTGCTTACGTGTCT +
Preference number: 6 (lower is better)
Translates to: SPGRRSTRRLGC*CWWPHCAAYVS
Trigger: AGACACGTAAGCAGCACAGTGAGGCCACCAACAGCAGCAACCGAGTCTTCGTGTACTGCGCCTTCCTGGACT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543617.2
CDS GCA 72 bp GGAAGTGGAACCCACGCCTTCTGGCCCCAGAGCTCATaGTGCGGACAGGCTCTGTTCGACCTGAAGATTATT +
Preference number: 6 (lower is better)
Translates to: GSGTHAFWPQSS*CGQALFDLKII
Trigger: AATAATCTTCAGGTCGAACAGAGCCTGTCCGCAGCATGAGCTCTGGGGCCAGAAGGCGTGGGTTCCACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541937.2
CDS CCA 72 bp ACGTGTCAATCTGTGCTTGAGGTGGACCGTAATGAGTaGAGAGCCCGACAGGTTCTGAGACAGGGTGGGTGG +
Preference number: 6 (lower is better)
Translates to: TCQSVLEVDRNE*RARQVLRQGGW
Trigger: CCACCCACCCTGTCTCAGAACCTGTCGGGCTCTCCACTCATTACGGTCCACCTCAAGCACAGATTGACACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
CDS CCA 72 bp AGCTGCGGCAGTACAGACCAGTTGTGCCAGCATGACTaGGATCCACCGACTAAACCAGCACGCATGTGGCAT +
Preference number: 6 (lower is better)
Translates to: SCGSTDQLCQHD*DPPTKPARMWH
Trigger: ATGCCACATGCGTGCTGGTTTAGTCGGTGGATCCCAGTCATGCTGGCACAACTGGTCTGTACTGCCGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536988.1
CDS CCA 72 bp ATGAGTCCAATAGGGGCCTTCAGGGCCACACTGCTCTaGCTTGCTGATGCAGGAGCTGTTGTACCTGCCGTA +
Preference number: 6 (lower is better)
Translates to: MSPIGAFRATLL*LADAGAVVPAV
Trigger: TACGGCAGGTACAACAGCTCCTGCATCAGCAAGCCAGAGCAGTGTGGCCCTGAAGGCCCCTATTGGACTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542091.5
CDS CAA 72 bp GAGCCTCTGCCACCGCTGGAGCAGACTTTGAACCCATaGGAGATGACCTGTCCCCCATACGCAGAAGGGATT +
Preference number: 6 (lower is better)
Translates to: EPLPPLEQTLNP*EMTCPPYAEGI
Trigger: AATCCCTTCTGCGTATGGGGGACAGGTCATCTCCAATGGGTTCAAAGTCTGCTCCAGCGGTGGCAGAGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000535015.5
ENST00000541143.5
CDS CAA 72 bp CATCTGGCTGTAGGGTGGTTTCCAAATGTGGCCATGTaGCTGCCCTACAGGCAGGCGGATGAGAGCGATGCT +
Preference number: 6 (lower is better)
Translates to: HLAVGWFPNVAM*LPYRQADESDA
Trigger: AGCATCGCTCTCATCCGCCTGCCTGTAGGGCAGCAACATGGCCACATTTGGAAACCACCCTACAGCCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CAA 90 bp CTGAAGTCCAGGAAGGCGCAGTACACGAAGACTCGGTTGCTGCTGTaGGTGGCCTCACTGTGCTGCTTACGTGTCAATCTGTGCTTGAGG +
Preference number: 6 (lower is better)
Translates to: LKSRKAQYTKTRLLL*VASLCCLRVNLCLR
Trigger: CCTCAAGCACAGATTGACACGTAAGCAGCACAGTGAGGCCACCAACAGCAGCAACCGAGTCTTCGTGTACTGCGCCTTCCTGGACTTCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
CDS CAA 90 bp GAGTTGAGCGTGGCAAACATGTACTGGAAAACCACAGCACAACCGTaGACAGCAAGCACGCCAAAGACCCACGAGGTACCCAGGATGGGC +
Preference number: 6 (lower is better)
Translates to: ELSVANMYWKTTAQP*TASTPKTHEVPRMG
Trigger: GCCCATCCTGGGTACCTCGTGGGTCTTTGGCGTGCTTGCTGTCAACGGTTGTGCTGTGGTTTTCCAGTACATGTTTGCCACGCTCAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000376682.8
ENST00000446583.6
ENST00000535015.5
ENST00000537489.5
ENST00000540207.1
ENST00000543617.2
CDS TCA 72 bp CTCAGGTCAAGACATCCTGGTTCCAGAGCCCCACCGTaGCCCACCATGTTACTCAGCACAGGTGAGTTACAC +
Preference number: 6 (lower is better)
Translates to: LRSRHPGSRAPP*PTMLLSTGELH
Trigger: GTGTAACTCACCTGTGCTGAGTAACATGGTGGGTCACGGTGGGGCTCTGGAACCAGGATGTCTTGACCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS TCA 72 bp CTGCTTTTCGAGCCCTCCCCACTCCCGTCCTCATGCTaGGTGTTCCAAGTGGAACGTTTCAGTGCAAGTGTG +
Preference number: 6 (lower is better)
Translates to: LLFEPSPLPSSC*VFQVERFSASV
Trigger: CACACTTGCACTGAAACGTTCCACTTGGAACACTCAGCATGAGGACGGGAGTGGGGAGGGCTCGAAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS GCA 72 bp ACGAAGACTCGGTTGCTGCTGTTGGTGGCCTCACTGTaGTGCTTACGTGTCAATCTGTGCTTGAGGTGGACC +
Preference number: 6 (lower is better)
Translates to: TKTRLLLLVASL*CLRVNLCLRWT
Trigger: GGTCCACCTCAAGCACAGATTGACACGTAAGCAGCACAGTGAGGCCACCAACAGCAGCAACCGAGTCTTCGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
CDS GCA 72 bp GCAGAGCTGCTCGTGAGCGACCAGACCTTGGTTTTGTaGTTGAAGGCGGCTCTCACCTCTGAATTCAGGAGA +
Preference number: 6 (lower is better)
Translates to: AELLVSDQTLVL*LKAALTSEFRR
Trigger: TCTCCTGAATTCAGAGGTGAGAGCCGCCTTCAAGCACAAAACCAAGGTCTGGTCGCTCACGAGCAGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000376682.8
ENST00000535015.5
ENST00000540207.1
ENST00000543617.2
CDS GCA 72 bp GGTGAAGCTTCACTCACTCACCCACCACTCACTTCCTaGTGTGCAGCCCAGTTCCTAACAGGCTACGGATTG +
Preference number: 6 (lower is better)
Translates to: GEASLTHPPLTS*CAAQFLTGYGL
Trigger: CAATCCGTAGCCTGTTAGGAACTGGGCTGCACAGCAGGAAGTGAGTGGTGGGTGAGTGAGTGAAGCTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS GCA 72 bp AGTGGAACCCACGCCTTCTGGCCCCAGAGCTCATGCTaGGGACAGGCTCTGTTCGACCTGAAGATTATTGAA +
Preference number: 6 (lower is better)
Translates to: SGTHAFWPQSSC*GQALFDLKIIE
Trigger: TTCAATAATCTTCAGGTCGAACAGAGCCTGTCCGCAGCATGAGCTCTGGGGCCAGAAGGCGTGGGTTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541937.2
CDS CCA 72 bp GGTAATGGGAGGAATTCACGGTCTTGGGCAGGATTTTaGCCACGGAAAACTCTGCCATGGCAGAGGAGCCCT +
Preference number: 6 (lower is better)
Translates to: GNGRNSRSWAGF*PRKTLPWQRSP
Trigger: AGGGCTCCTCTGCCATGGCAGAGTTTTCCGTGGCCAAAATCCTGCCCAAGACCGTGAATTCCTCCCATTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
ENST00000544673.5
ENST00000545900.5
CDS CCA 72 bp AGGCGCAGTACACGAAGACTCGGTTGCTGCTGTTGGTaGCCTCACTGTGCTGCTTACGTGTCAATCTGTGCT +
Preference number: 6 (lower is better)
Translates to: RRSTRRLGCCCW*PHCAAYVSICA
Trigger: AGCACAGATTGACACGTAAGCAGCACAGTGAGGCCACCAACAGCAGCAACCGAGTCTTCGTGTACTGCGCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000376682.8
ENST00000535015.5
CDS CAA 72 bp GCACAAGGGCTTTCTCAGCCCTGCCAGGCCGACCCTTaGGAAAAGACATCTGGCTGTAGGGTGGTTTCCAAA +
Preference number: 6 (lower is better)
Translates to: AQGLSQPCQADP*EKTSGCRVVSK
Trigger: TTTGGAAACCACCCTACAGCCAGATGTCTTTTCCAAAGGGTCGGCCTGGCAGGGCTGAGAAAGCCCTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS TCA 72 bp CTCTCAGCACCCGCGTCTCTACCTCCAGTTGTATCCTaGAGTTCATGGATCCCATCCACATTCTCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: LSAPASLPPVVS*SSWIPSTFSSG
Trigger: GCCACTGGAGAATGTGGATGGGATCCATGAACTTCAGGATACAACTGGAGGTAGAGACGCGGGTGCTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS TCA 72 bp CAAGGGAACGTGGTTCGTTTGAACCCGAGCCAGTGGTaGAACAAACTTGCACAAGGGCTTTCTCAGCCCTGC +
Preference number: 6 (lower is better)
Translates to: QGNVVRLNPSQW*NKLAQGLSQPC
Trigger: GCAGGGCTGAGAAAGCCCTTGTGCAAGTTTGTTTCACCACTGGCTCGGGTTCAAACGAACCACGTTCCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS TCA 72 bp CCCCACTCAGTTCCCACACCAGGGCGTGATGGCTGCTaGATTTGGCCGCAAGCGATAGTTCTAATTTTCTGG +
Preference number: 6 (lower is better)
Translates to: PHSVPTPGRDGC*IWPQAIVLIFW
Trigger: CCAGAAAATTAGAACTATCGCTTGCGGCCAAATTCAGCAGCCATCACGCCCTGGTGTGGGAACTGAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS TCA 72 bp GTGAGCTTGTGGGTTCGGGACGCTCCAGTTGTATCCTaGAGTTCATGGATCCCATCCACATTCTCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: VSLWVRDAPVVS*SSWIPSTFSSG
Trigger: GCCACTGGAGAATGTGGATGGGATCCATGAACTTCAGGATACAACTGGAGCGTCCCGAACCCACAAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535015.5
CDS TCA 72 bp CCCAGAGCTCATGCTGCGGACAGGCTCTGTTCGACCTaGAGATTATTGAAGAGTCGAGAAGTCTGGTGGGGA +
Preference number: 6 (lower is better)
Translates to: PRAHAADRLCST*RLLKSREVWWG
Trigger: TCCCCACCAGACTTCTCGACTCTTCAATAATCTTCAGGTCGAACAGAGCCTGTCCGCAGCATGAGCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541937.2
CDS CCA 72 bp AGTCCCTGCAGGGAGTTGAGCGTGGCAAACATGTACTaGAAAACCACAGCACAACCGTTGACAGCAAGCACG +
Preference number: 6 (lower is better)
Translates to: SPCRELSVANMY*KTTAQPLTAST
Trigger: CGTGCTTGCTGTCAACGGTTGTGCTGTGGTTTTCCAGTACATGTTTGCCACGCTCAACTCCCTGCAGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000376682.8
ENST00000446583.6
ENST00000535015.5
ENST00000537489.5
ENST00000540207.1
ENST00000543617.2
CDS CCA 72 bp AATTGTGATATTTGCCAACAGATGGGTTACCAAGCGTaGCGTGGCGACCGCCTCCTGTCCTGGACTTTGTGC +
Preference number: 6 (lower is better)
Translates to: NCDICQQMGYQA*RGDRLLSWTLC
Trigger: GCACAAAGTCCAGGACAGGAGGCGGTCGCCACGCCACGCTTGGTAACCCATCTGTTGGCAAATATCACAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CAA 72 bp GTGGCAAACATGTACTGGAAAACCACAGCACAACCGTaGACAGCAAGCACGCCAAAGACCCACGAGGTACCC +
Preference number: 6 (lower is better)
Translates to: VANMYWKTTAQP*TASTPKTHEVP
Trigger: GGGTACCTCGTGGGTCTTTGGCGTGCTTGCTGTCAACGGTTGTGCTGTGGTTTTCCAGTACATGTTTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000376682.8
ENST00000446583.6
ENST00000535015.5
ENST00000537489.5
ENST00000540207.1
ENST00000543617.2
CDS CAA 72 bp GAGCTGCTCGTGAGCGACCAGACCTTGGTTTTGTGCTaGAAGGCGGCTCTCACCTCTGAATTCAGGAGACAA +
Preference number: 6 (lower is better)
Translates to: ELLVSDQTLVLC*KAALTSEFRRQ
Trigger: TTGTCTCCTGAATTCAGAGGTGAGAGCCGCCTTCAAGCACAAAACCAAGGTCTGGTCGCTCACGAGCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000376682.8
ENST00000535015.5
ENST00000540207.1
ENST00000543617.2
CDS CAA 72 bp CACAGCCGCTCTCAGCACCCGCGTCTCTACCTCCAGTaGTATCCTGAAGTTCATGGATCCCATCCACATTCT +
Preference number: 6 (lower is better)
Translates to: HSRSQHPRLYLQ*YPEVHGSHPHS
Trigger: AGAATGTGGATGGGATCCATGAACTTCAGGATACAACTGGAGGTAGAGACGCGGGTGCTGAGAGCGGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS TCA 72 bp ACTTGGCCTGGTCCTGCTCAGACCCTATCACGAGGTTaGCGTTGGACTCTCCATAGTCACGAGACACTTTTC +
Preference number: 6 (lower is better)
Translates to: TWPGPAQTLSRG*RWTLHSHETLF
Trigger: GAAAAGTGTCTCGTGACTATGGAGAGTCCAACGTCAACCTCGTGATAGGGTCTGAGCAGGACCAGGCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000535015.5
ENST00000537600.2
ENST00000541143.5
ENST00000542091.5
CDS TCA 72 bp TGGCAAACATGTACTGGAAAACCACAGCACAACCGTTaGCAGCAAGCACGCCAAAGACCCACGAGGTACCCA +
Preference number: 6 (lower is better)
Translates to: WQTCTGKPQHNR*QQARQRPTRYP
Trigger: TGGGTACCTCGTGGGTCTTTGGCGTGCTTGCTGTCAACGGTTGTGCTGTGGTTTTCCAGTACATGTTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000376682.8
ENST00000446583.6
ENST00000535015.5
ENST00000537489.5
ENST00000540207.1
ENST00000543617.2
CDS TCA 72 bp AGAGGCATCCTCAGGCCAGCTTCTCCAGTTGTATCCTaGAGTTCATGGATCCCATCCACATTCTCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: RGILRPASPVVS*SSWIPSTFSSG
Trigger: GCCACTGGAGAATGTGGATGGGATCCATGAACTTCAGGATACAACTGGAGAAGCTGGCCTGAGGATGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543826.5
CDS CCA 72 bp CATGACTGGGATCCACCGACTAAACCAGCACGCATGTaGCATTCTGGCCTCCAAGGAGAACACATCTCTTTC +
Preference number: 6 (lower is better)
Translates to: HDWDPPTKPARM*HSGLQGEHISF
Trigger: GAAAGAGATGTGTTCTCCTTGGAGGCCAGAATGCCACATGCGTGCTGGTTTAGTCGGTGGATCCCAGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536988.1
CDS CCA 72 bp AGGCGCAGTACACGAAGACTCGGTTGCTGCTGTTGGTaGCCTCACTGTGCTGCTTACGTGTCTGAAATGAAA +
Preference number: 6 (lower is better)
Translates to: RRSTRRLGCCCW*PHCAAYVSEMK
Trigger: TTTCATTTCAGACACGTAAGCAGCACAGTGAGGCCACCAACAGCAGCAACCGAGTCTTCGTGTACTGCGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543617.2
CDS CAA 90 bp AGTGAAGTCATTCAATTGCTCAGCCCTTGCCAGCTGCGCACACTCTaGCCCCACTTTACAAATGAAGCCACGAAGCCACATGGTGGTTGG +
Preference number: 6 (lower is better)
Translates to: SEVIQLLSPCQLRTL*PHFTNEATKPHGGW
Trigger: CCAACCACCATGTGGCTTCGTGGCTTCATTTGTAAAGTGGGGCAAGAGTGTGCGCAGCTGGCAAGGGCTGAGCAATTGAATGACTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS CAA 90 bp AACAAACTTGCACAAGGGCTTTCTCAGCCCTGCCAGGCCGACCCTTaGGAAAAGACATCTGGCTGTAGGGTGGTTTCCAAATGTGGCCAT +
Preference number: 6 (lower is better)
Translates to: NKLAQGLSQPCQADP*EKTSGCRVVSKCGH
Trigger: ATGGCCACATTTGGAAACCACCCTACAGCCAGATGTCTTTTCCAAAGGGTCGGCCTGGCAGGGCTGAGAAAGCCCTTGTGCAAGTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS TCA 72 bp CATCTGTGGGCATCACGGGGCTTGCTGTGGATGTCATaGAGAGGCTTGGCAGCGTTGAAGACAATAAAGCAT +
Preference number: 6 (lower is better)
Translates to: HLWASRGLLWMS*RGLAALKTIKH
Trigger: ATGCTTTATTGTCTTCAACGCTGCCAAGCCTCTTCATGACATCCACAGCAAGCCCCGTGATGCCCACAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261654.10
ENST00000535015.5
ENST00000537600.2
ENST00000542091.5
CDS TCA 72 bp GTCTCCATGGATCTTGTAGTTGTCGGCGCTGATCTGTaGGATGACTCTGGTCACAGCGATGAGGATGCCAAT +
Preference number: 6 (lower is better)
Translates to: VSMDLVVVGADL*DDSGHSDEDAN
Trigger: ATTGGCATCCTCATCGCTGTGACCAGAGTCATCTCACAGATCAGCGCCGACAACTACAAGATCCATGGAGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000376682.8
ENST00000446583.6
ENST00000535015.5
ENST00000537489.5
ENST00000540207.1
ENST00000543617.2
CDS TCA 72 bp TCCTTGGCCCACCTGGCCTCTGAATTCAGGAGACAATaGAAGAGGAATATGAACAGTCCCTGCAGGGAGTTG +
Preference number: 6 (lower is better)
Translates to: SLAHLASEFRRQ*KRNMNSPCREL
Trigger: CAACTCCCTGCAGGGACTGTTCATATTCCTCTTTCATTGTCTCCTGAATTCAGAGGCCAGGTGGGCCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS CCA 72 bp CAAGAAAAACTGGAAATCTTCAGGGCCACACTGCTCTaGCTTGCTGATGCAGGAGCTGTTGTACCTGCCGTA +
Preference number: 6 (lower is better)
Translates to: QEKLEIFRATLL*LADAGAVVPAV
Trigger: TACGGCAGGTACAACAGCTCCTGCATCAGCAAGCCAGAGCAGTGTGGCCCTGAAGATTTCCAGTTTTTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541937.2
CDS CAA 72 bp ATTCAATTGCTCAGCCCTTGCCAGCTGCGCACACTCTaGCCCCACTTTACAAATGAAGCCACGAAGCCACAT +
Preference number: 6 (lower is better)
Translates to: IQLLSPCQLRTL*PHFTNEATKPH
Trigger: ATGTGGCTTCGTGGCTTCATTTGTAAAGTGGGGCAAGAGTGTGCGCAGCTGGCAAGGGCTGAGCAATTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS CAA 90 bp TATTCACTCACTTTACAGATGAGGCTTTTCAAAGGGAAGCAGTGGTaGCCCAAGATCCCCACAAACAGGTCGGAACCGGAAGTGGAACCC +
Preference number: 6 (lower is better)
Translates to: YSLTLQMRLFKGKQW*PKIPTNRSEPEVEP
Trigger: GGGTTCCACTTCCGGTTCCGACCTGTTTGTGGGGATCTTGGGCAACCACTGCTTCCCTTTGAAAAGCCTCATCTGTAAAGTGAGTGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541937.2
CDS TCA 72 bp CAAAGCTCGGAGCCAAGTGAAATTCCTGAGGGTCTGTaGGAACGGGACCTCTTAACCTTCACTTCCTTGGAA +
Preference number: 6 (lower is better)
Translates to: QSSEPSEIPEGL*ERDLLTFTSLE
Trigger: TTCCAAGGAAGTGAAGGTTAAGAGGTCCCGTTCTCACAGACCCTCAGGAATTTCACTTGGCTCCGAGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000541143.5
ENST00000543826.5
CDS GCA 72 bp TGTGAGTTGGTCTTAGTTGGCATGACCTTTGACATCTaGTTCATCAATAGGCCCCTGCTGTGGTCAGTGTGC +
Preference number: 6 (lower is better)
Translates to: CELVLVGMTFDI*FINRPLLWSVC
Trigger: GCACACTGACCACAGCAGGGGCCTATTGATGAAGCAGATGTCAAAGGTCATGCCAACTAAGACCAACTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 72 bp ACGCCAACACCTGAAATCCTGGATGGTCCTGCGATCTaGAGTAGACGCCACGCACCTGAAAGTTGTAATAAA +
Preference number: 6 (lower is better)
Translates to: TPTPEILDGPAI*SRRHAPESCNK
Trigger: TTTATTACAACTTTCAGGTGCGTGGCGTCTACTCCAGATCGCAGGACCATCCAGGATTTCAGGTGTTGGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000535015.5
ENST00000541143.5
ENST00000542091.5
ENST00000543826.5
CDS CCA 72 bp ATCCTGAAGTTCATGGATCCCATCCACATTCTCCAGTaGCCAGTAATGGGAAGCAGACGCCAACACCTGAAA +
Preference number: 6 (lower is better)
Translates to: ILKFMDPIHILQ*PVMGSRRQHLK
Trigger: TTTCAGGTGTTGGCGTCTGCTTCCCATTACTGGCCACTGGAGAATGTGGATGGGATCCATGAACTTCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261654.10
ENST00000535015.5
ENST00000541143.5
ENST00000541937.2
ENST00000542091.5
ENST00000543826.5
CDS TCA 72 bp TTGAAGGCGGCTCTCACCTCTGAATTCAGGAGACAATaGAAGAGGAATATGAACAGTCCCTGCAGGGAGTTG +
Preference number: 6 (lower is better)
Translates to: LKAALTSEFRRQ*KRNMNSPCREL
Trigger: CAACTCCCTGCAGGGACTGTTCATATTCCTCTTTCATTGTCTCCTGAATTCAGAGGTGAGAGCCGCCTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261654.10
ENST00000335486.10
ENST00000376682.8
ENST00000535015.5
ENST00000540207.1
ENST00000543617.2
CDS TCA 72 bp AGAAAACTGGATGCCAACAAGGGAACGTGGTTCGTTTaGACCCGAGCCAGTGGTGAAACAAACTTGCACAAG +
Preference number: 6 (lower is better)
Translates to: RKLDANKGTWFV*TRASGETNLHK
Trigger: CTTGTGCAAGTTTGTTTCACCACTGGCTCGGGTTCAAACGAACCACGTTCCCTTGTTGGCATCCAGTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS TCA 72 bp AAGCAGAGCGGACGTACCTCTGAATTCAGGAGACAATaGAAGAGGAATATGAACAGTCCCTGCAGGGAGTTG +
Preference number: 6 (lower is better)
Translates to: KQSGRTSEFRRQ*KRNMNSPCREL
Trigger: CAACTCCCTGCAGGGACTGTTCATATTCCTCTTTCATTGTCTCCTGAATTCAGAGGTACGTCCGCTCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537489.5
CDS GCA 72 bp GTCCTCATGCTGAGTGTTCCAAGTGGAACGTTTCAGTaGAAGTGTGAACGTGAAGCTACAGCTGAACTCCTT +
Preference number: 6 (lower is better)
Translates to: VLMLSVPSGTFQ*KCEREATAELL
Trigger: AAGGAGTTCAGCTGTAGCTTCACGTTCACACTTGCACTGAAACGTTCCACTTGGAACACTCAGCATGAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 72 bp TATGATGATGTGATAATTGTGATATTTGCCAACAGATaGGTTACCAAGCGTGGCGTGGCGACCGCCTCCTGT +
Preference number: 6 (lower is better)
Translates to: YDDVIIVIFANR*VTKRGVATASC
Trigger: ACAGGAGGCGGTCGCCACGCCACGCTTGGTAACCCATCTGTTGGCAAATATCACAATTATCACATCATCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 72 bp GCTAAGGTGATGTCTTTCTCAGCTACAGGGTCCACCTaGGGCAGTCATACAACATTCCTAATCCCTGCAAAT +
Preference number: 6 (lower is better)
Translates to: AKVMSFSATGST*GSHTTFLIPAN
Trigger: ATTTGCAGGGATTAGGAATGTTGTATGACTGCCCCAGGTGGACCCTGTAGCTGAGAAAGACATCACCTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537489.5
CDS CAA 72 bp TTACTGTTAACTGGGGTCATAATCGCTCAGAGATCTTaGCTACCACATGGGTCAGGGAGAATGTCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: LLLTGVIIAQRS*LPHGSGRMSEP
Trigger: GGGCTCAGACATTCTCCCTGACCCATGTGGTAGCAAAGATCTCTGAGCGATTATGACCCCAGTTAACAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CAA 90 bp GGGATGCGTTTGCTGAATGAAACGGGGGCCCTTCAAACATGTGAGTaGGTCTTAGTTGGCATGACCTTTGACATCTGCTTCATCAATAGG +
Preference number: 6 (lower is better)
Translates to: GMRLLNETGALQTCE*VLVGMTFDICFINR
Trigger: CCTATTGATGAAGCAGATGTCAAAGGTCATGCCAACTAAGACCAACTCACATGTTTGAAGGGCCCCCGTTTCATTCAGCAAACGCATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS TCA 72 bp TTGACCTTCCCTTCCACAATATCTCCAGTTGTATCCTaGAGTTCATGGATCCCATCCACATTCTCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: LTFPSTISPVVS*SSWIPSTFSSG
Trigger: GCCACTGGAGAATGTGGATGGGATCCATGAACTTCAGGATACAACTGGAGATATTGTGGAAGGGAAGGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261654.10
ENST00000541937.2
ENST00000542091.5
CDS TCA 72 bp TGCAGGAGCTGTTGTACCTGCCGTAATAGAGAAGCGTaGCTCCCTTTTCCTCTTTCAGGTAAATGCCTTTGT +
Preference number: 6 (lower is better)
Translates to: CRSCCTCRNREA*LPFPLSGKCLC
Trigger: ACAAAGGCATTTACCTGAAAGAGGAAAAGGGAGTCACGCTTCTCTATTACGGCAGGTACAACAGCTCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261654.10
ENST00000535015.5
ENST00000541143.5
ENST00000541937.2
ENST00000542091.5
CDS GCA 72 bp TTTATCAAGAAAAACTGGAAATCTTCAGGGCCACACTaGTCTGGCTTGCTGATGCAGGAGCTGTTGTACCTG +
Preference number: 6 (lower is better)
Translates to: FIKKNWKSSGPH*SGLLMQELLYL
Trigger: CAGGTACAACAGCTCCTGCATCAGCAAGCCAGAGCAGTGTGGCCCTGAAGATTTCCAGTTTTTCTTGATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541937.2
CDS CCA 72 bp GAAAAAGCACAGCAAGTGAGTGAGACAAAAGACAAATaGGACCAACATATCTCTCAACCTGCAGCAGGCACC +
Preference number: 6 (lower is better)
Translates to: EKAQQVSETKDK*DQHISQPAAGT
Trigger: GGTGCCTGCTGCAGGTTGAGAGATATGTTGGTCCCATTTGTCTTTTGTCTCACTCACTTGCTGTGCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 72 bp AGGGACCGGTTTCATGGAAGACAATTTTTCCATGGATaGGTTGGAGAGGTTGGTTTCGGGATGATTCAAGTG +
Preference number: 6 (lower is better)
Translates to: RDRFHGRQFFHG*VGEVGFGMIQV
Trigger: CACTTGAATCATCCCGAAACCAACCTCTCCAACCCATCCATGGAAAAATTGTCTTCCATGAAACCGGTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CAA 90 bp CTGACTTTCCCCAGTCCTTTGGAGCACAGGAAGGATGTTATCTTTTaGTCCTTATGCCCTAAATTCCAGAAGCAGTTCAAGGAGACTCCT +
Preference number: 6 (lower is better)
Translates to: LTFPSPLEHRKDVIF*SLCPKFQKQFKETP
Trigger: AGGAGTCTCCTTGAACTGCTTCTGGAATTTAGGGCATAAGGACAAAAAGATAACATCCTTCCTGTGCTCCAAAGGACTGGGGAAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537600.2
CDS CCA 72 bp GGAAGTTACACAAGTATTTGTTCATCTCTATCACCGTaGCTTCAAAGCAGATTGTGTCCACATCTGCTCCCC +
Preference number: 6 (lower is better)
Translates to: GSYTSICSSLSP*LQSRLCPHLLP
Trigger: GGGGAGCAGATGTGGACACAATCTGCTTTGAAGCCACGGTGATAGAGATGAACAAATACTTGTGTAACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CAA 72 bp CTAATAAATGCCTCAGTTGCTACTACCCCTTTTGCTTaGAGCTTCATGTTGAGCCATGTAGGCTCTGGAGGT +
Preference number: 6 (lower is better)
Translates to: LINASVATTPFA*SFMLSHVGSGG
Trigger: ACCTCCAGAGCCTACATGGCTCAACATGAAGCTCAAAGCAAAAGGGGTAGTAGCAACTGAGGCATTTATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 72 bp TTTCTCAGGCCCATGTTATTGGAAAGCAAGGGACTTTaGCATTTCTATCGCAACAAGGCGACCTGTATTCTT +
Preference number: 6 (lower is better)
Translates to: FLRPMLLESKGL*HFYRNKATCIL
Trigger: AAGAATACAGGTCGCCTTGTTGCGATAGAAATGCCAAAGTCCCTTGCTTTCCAATAACATGGGCCTGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS CCA 72 bp CCGGTTTCATGGAAGACAATTTTTCCATGGATGGGTTaGAGAGGTTGGTTTCGGGATGATTCAAGTGCATTA +
Preference number: 6 (lower is better)
Translates to: PVSWKTIFPWMG*RGWFRDDSSAL
Trigger: TAATGCACTTGAATCATCCCGAAACCAACCTCTCCAACCCATCCATGGAAAAATTGTCTTCCATGAAACCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CAA 72 bp TTTTCTCAGGCCCATGTTATTGGAAAGCAAGGGACTTaGGCATTTCTATCGCAACAAGGCGACCTGTATTCT +
Preference number: 6 (lower is better)
Translates to: FSQAHVIGKQGT*AFLSQQGDLYS
Trigger: AGAATACAGGTCGCCTTGTTGCGATAGAAATGCCAAAGTCCCTTGCTTTCCAATAACATGGGCCTGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS CAA 72 bp CCCAGTCCTTTGGAGCACAGGAAGGATGTTATCTTTTaGTCCTTATGCCCTAAATTCCAGAAGCAGTTCAAG +
Preference number: 6 (lower is better)
Translates to: PSPLEHRKDVIF*SLCPKFQKQFK
Trigger: CTTGAACTGCTTCTGGAATTTAGGGCATAAGGACAAAAAGATAACATCCTTCCTGTGCTCCAAAGGACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537600.2
CDS CAA 72 bp TCAGTTGCTACTACCCCTTTTGCTTTGAGCTTCATGTaGAGCCATGTAGGCTCTGGAGGTTATCAGATAAGA +
Preference number: 6 (lower is better)
Translates to: SVATTPFALSFM*SHVGSGGYQIR
Trigger: TCTTATCTGATAACCTCCAGAGCCTACATGGCTCAACATGAAGCTCAAAGCAAAAGGGGTAGTAGCAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CAA 90 bp GACACTGAATTTTCTCAGGCCCATGTTATTGGAAAGCAAGGGACTTaGGCATTTCTATCGCAACAAGGCGACCTGTATTCTTTCATACAT +
Preference number: 6 (lower is better)
Translates to: DTEFSQAHVIGKQGT*AFLSQQGDLYSFIH
Trigger: ATGTATGAAAGAATACAGGTCGCCTTGTTGCGATAGAAATGCCAAAGTCCCTTGCTTTCCAATAACATGGGCCTGAGAAAATTCAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446583.6
CDS CAA 90 bp TATGCTGATCTAATAAATGCCTCAGTTGCTACTACCCCTTTTGCTTaGAGCTTCATGTTGAGCCATGTAGGCTCTGGAGGTTATCAGATA +
Preference number: 6 (lower is better)
Translates to: YADLINASVATTPFA*SFMLSHVGSGGYQI
Trigger: TATCTGATAACCTCCAGAGCCTACATGGCTCAACATGAAGCTCAAAGCAAAAGGGGTAGTAGCAACTGAGGCATTTATTAGATCAGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 72 bp TGTAAAAATCAGGAGCGAGTAGGATTTACTGTTAACTaGGGTCATAATCGCTCAGAGATCTTTGCTACCACA +
Preference number: 6 (lower is better)
Translates to: CKNQERVGFTVN*GHNRSEIFATT
Trigger: TGTGGTAGCAAAGATCTCTGAGCGATTATGACCCCAGTTAACAGTAAATCCTACTCGCTCCTGATTTTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 72 bp TTTAAAAATGACTTCCCAAAGTCTCACGGCTCATTATaGCACAATGAATATTTGAACCCCAGTCCACCTACC +
Preference number: 6 (lower is better)
Translates to: FKNDFPKSHGSL*HNEYLNPSPPT
Trigger: GGTAGGTGGACTGGGGTTCAAATATTCATTGTGCCATAATGAGCCGTGAGACTTTGGGAAGTCATTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS TCA 72 bp TTTTCCATGGATGGGTTGGAGAGGTTGGTTTCGGGATaGTTCAAGTGCATTACATTTATTGTGCACTTTATT +
Preference number: 6 (lower is better)
Translates to: FSMDGLERLVSG*FKCITFIVHFI
Trigger: AATAAAGTGCACAATAAATGTAATGCACTTGAATCATCCCGAAACCAACCTCTCCAACCCATCCATGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS TCA 72 bp TCCAAAGCCTTCTATAATCGTCCATCACATATACCTTaGAACCCCGTGATGATCAACAGAACAATATTCATC +
Preference number: 6 (lower is better)
Translates to: SKAFYNRPSHIP*NPVMINRTIFI
Trigger: GATGAATATTGTTCTGTTGATCATCACGGGGTTTCAAGGTATATGTGATGGACGATTATAGAAGGCTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CCA 72 bp ATGAACTCAAACAGACTATTTGGAATTGGGCCTCACTaGAAACGTCTTAGGCGATGCTTAATCTTTTCAAAT +
Preference number: 6 (lower is better)
Translates to: MNSNRLFGIGPH*KRLRRCLIFSN
Trigger: ATTTGAAAAGATTAAGCATCGCCTAAGACGTTTCCAGTGAGGCCCAATTCCAAATAGTCTGTTTGAGTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CAA 72 bp CCAAGACATAGTGAATTCAGATACTACCAAACAGAATaGGCCTTAGAATTCATCGTAGATCCAAACTTGACA +
Preference number: 6 (lower is better)
Translates to: PRHSEFRYYQTE*ALEFIVDPNLT
Trigger: TGTCAAGTTTGGATCTACGATGAATTCTAAGGCCAATTCTGTTTGGTAGTATCTGAATTCACTATGTCTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CAA 90 bp TACTACCAAACAGAATTGGCCTTAGAATTCATCGTAGATCCAAACTaGACAGAACGAAGAACAAAAGTACATAAATGCTCACCTACAGTT +
Preference number: 6 (lower is better)
Translates to: YYQTELALEFIVDPN*TERRTKVHKCSPTV
Trigger: AACTGTAGGTGAGCATTTATGTACTTTTGTTCTTCGTTCTGTCAAGTTTGGATCTACGATGAATTCTAAGGCCAATTCTGTTTGGTAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS TCA 72 bp AGCAAAATTCAGCCACAGTGTGTAACTGTATCTGTGTaGATATATCACCTTAGGAGAAGAATTTTTCATAGG +
Preference number: 6 (lower is better)
Translates to: SKIQPQCVTVSV*IYHLRRRIFHR
Trigger: CCTATGAAAAATTCTTCTCCTAAGGTGATATATTCACACAGATACAGTTACACACTGTGGCTGAATTTTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541143.5
CDS CAA 72 bp ACAGAATTGGCCTTAGAATTCATCGTAGATCCAAACTaGACAGAACGAAGAACAAAAGTACATAAATGCTCA +
Preference number: 6 (lower is better)
Translates to: TELALEFIVDPN*TERRTKVHKCS
Trigger: TGAGCATTTATGTACTTTTGTTCTTCGTTCTGTCAAGTTTGGATCTACGATGAATTCTAAGGCCAATTCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541143.5