RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRB3 (Homo sapiens)

Ensembl gene IDs: ENSG00000135298

Ensembl transcript IDs: ENST00000238918.12, ENST00000370598.6, ENST00000546190.5, ENST00000603207.1, ENST00000604969.1, ENST00000684661.1

Found 379 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACAGGATGGTCAGAACTGTACACCTGGTCATCTCTCCACTAGCCTaGCTAGTGAGAAGTTACCATATGAAAACACCACTGACGTTTGGC +
Preference number: 1 (lower is better)
Translates to: HRMVRTVHLVISPLA*LVRSYHMKTPLTFG
Trigger: GCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTTCTGACCATCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATCTGCCCATGGCCCTCTaGATTCGGAGCCTCCATGGG +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYLPMAL*IRSLHG
Trigger: CCCATGGAGGCTCCGAATGCAGAGGGCCATGGGCAG...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGGCCTCCATGGGCAGCTaGAGTGCACTGCCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELASMGS*SALPAS
Trigger: AGAAGCCGGCAGTGCACTGCAGCTGCCCATGGAGGC...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATGGTCCCAATCACCGTTaGCCATTTTCCCCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYGPNHR*PFSPAQ
Trigger: CTGAGCCGGGGAAAATGGGCAACGGTGATTGGGACC...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATACGCCATGGCGTTACTaGCGGTGGTGGCTGACAAAG +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYTPWRY*RWWLTK
Trigger: CTTTGTCAGCCACCACCGCCAGTAACGCCATGGCGT...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACATCCAAAGAGACGCCATaGCGTTACTGGCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTSKETP*RYWRWW
Trigger: CCACCACCGCCAGTAACGCCATGGCGTCTCTTTGGA...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACGCGTCCCAGCAACAGTaGCGGAGAGACTCCCCTTCG +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYASQQQ*RRDSPS
Trigger: CGAAGGGGAGTCTCTCCGTCACTGTTGCTGGGACGC...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACAGGCCTTCCTCCATACTaGGGAGGTGTGCATGACCTT +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTGLPPY*GGVHDL
Trigger: AAGGTCATGCACACCTCCTCAGTATGGAGGAAGGCC...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGTGCCGGCTTCTCTGCTaGGTCCCATTCGAGCACGTT +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELCRLLC*VPFEHV
Trigger: AACGTGCTCGAATGGGACTCAGCAGAGAAGCCGGCA...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATAGGCAGCCCTCTGTCTaGTCATTCAGGGGTAACACC +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYRQPSV*SFRGNT
Trigger: GGTGTTACCCCTGAATGAGCAGACAGAGGGCTGCCT...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACACTCTTAATGGGCCGCTaGAGTGTGTCCCGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTLLMGR*SVSRKV
Trigger: CACCTTACGGGACACACTGCAGCGGCCCATTAAGAG...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATTGGCGTTACTGGCGGTaGTGGCTGACAAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYWRYWR*WLTKLL
Trigger: CAACAGCTTTGTCAGCCACCACCGCCAGTAACGCCA...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTCCAAAGAGACGCCATaGCGTTACTGGCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNSKETP*RYWRWW
Trigger: CCACCACCGCCAGTAACGCCATGGCGTCTCTTTGGA...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCGGCGGCGGCTGCTATaGCAGATTTGTTGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYRRRLL*QICWGG
Trigger: ACCGCCCCAACAAATCTGCCATAGCAGCCGCCGCCG...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACATGCGCCGTATCCAACTaGATCCAACCTCCAAACCGA +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTCAVSN*IQPPNR
Trigger: TCGGTTTGGAGGTTGGATTCAGTTGGATACGGCGCA...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGCGCACCTGCGACCCTTaGCCACAAGTAACCGAACAT +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELRTCDP*PQVTEH
Trigger: ATGTTCGGTTACTTGTGGTCAAGGGTCGCAGGTGCG...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACAATTCGAGCACGTTACTaGGCACTGGCTCCACGAACT +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTIRARY*ALAPRT
Trigger: AGTTCGTGGAGCCAGTGCTCAGTAACGTGCTCGAAT...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATCAGGACAACAGCGGCTaGAGGTCCCACAAAAGCATA +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYQDNSG*RSHKSI
Trigger: TATGCTTTTGTGGGACCTGCAGCCGCTGTTGTCCTG...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGACAGACTTGGGTGGTTTaGAGCTCCTGGGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRQTWVV*SSWVRQ
Trigger: CTGCCTGACCCAGGAGCTGCAAACCACCCAAGTCTG...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATCACGAACTCCACTCTTaGCACTGTCCATCAACTGGG +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYHELHS*HCPSTG
Trigger: CCCAGTTGATGGACAGTGGCAAGAGTGGAGTTCGTG...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACATGGGCAGCTGCAGTaGACTGCCGGCTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLHGQLQ*TAGFSA
Trigger: AGCAGAGAAGCCGGCAGTGCACTGCAGCTGCCCATG...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATGGTTATAGCACTCTCTaGTTTCTGCCCATGGCCCTC +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYGYSTL*FLPMAL
Trigger: GAGGGCCATGGGCAGAAAGCAGAGAGTGCTATAACC...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATCGTTACTGGCGGTGGTaGCTGACAAAGCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYRYWRW*LTKLLL
Trigger: CAACAACAGCTTTGTCAGCCACCACCGCCAGTAACG...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACACTTCTCCCACTCTGCTaGCCTCAGTTCCAAAGCATC +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTLLPLC*PQFQSI
Trigger: GATGCTTTGGAACTGAGGCCAGCAGAGTGGGAGAAG...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTAGTGGTTTGCAGCTCCTaGGTCAGGCAGCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLVVCSS*VRQPSV
Trigger: GACAGAGGGCTGCCTGACCCAGGAGCTGCAAACCAC...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACATTCGGAGCCTCCATaGGCAGCTGCAGTGCACTGC +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLHSEPP*AAAVHC
Trigger: GCAGTGCACTGCAGCTGCCCATGGAGGCTCCGAATG...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTTGCCAATCACCATGTTaGCCAGGACAACAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSCQSPC*PGQQRL
Trigger: CAGCCGCTGTTGTCCTGGTCAACATGGTGATTGGCA...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGATGCCAATCACCATGTTaGCCAGGACAACAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRCQSPC*PGQQRL
Trigger: CAGCCGCTGTTGTCCTGGTCAACATGGTGATTGGCA...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACACCAACTCAGAGGCCATaGAATTCTTCACAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTPTQRP*NSSQLC
Trigger: GCACAGCTGTGAAGAATTTCATGGCCTCTGAGTTGG...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTAGGAAAGCTGTTTGAATaGCCAGCGAGGAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLGKLFE*PARREA
Trigger: CGCCTCCCTCCTCGCTGGGCATTCAAACAGCTTTCC...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAGCTCAGGGAGGCTCTTaGTCTAAGACACCAGCACAG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRAQGGS*SKTPAQ
Trigger: CTGTGCTGGTGTCTTAGAGCAAGAGCCTCCCTGAGC...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACACTGCCCTGTTATCACTaGACCCTGACAGGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTLPCYH*TLTGPY
Trigger: ATAAGGACCTGTCAGGGTGCAGTGATAACAGGGCAG...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACAGAATGCCAAGTCGCCTaGTGGAGTTCTTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTECQVA*WSSFPH
Trigger: GTGTGGAAAAGAACTCCAGCAGGCGACTTGGCATTC...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTAACGCCATGGCGTTACTaGCGGTGGTGGCTGACAAAG +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLTPWRY*RWWLTK
Trigger: CTTTGTCAGCCACCACCGCCAGTAACGCCATGGCGT...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACAAACAAAATCAGCGACTaGTCGTCGATCCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTNKISD*SSIPHS
Trigger: AGAGTGGGGGATCGACGACCAGTCGCTGATTTTGTT...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACAGTGATACACAAGTTCTaGTTCGCACCTGCGACCCTT +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTVIHKF*FAPATL
Trigger: AAGGGTCGCAGGTGCGAACCAGAACTTGTGTATCAC...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACCACGTTACTGAGCACTaGCTCCACGAACTCCACTCT +
Preference number: 4 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNHVTEH*LHELHS
Trigger: AGAGTGGAGTTCGTGGAGCCAGTGCTCAGTAACGTG...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGCACACTTGGCACATTTaGGCGTCAAACCGCTATGAG +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELHTWHI*ASNRYE
Trigger: CTCATAGCGGTTTGACGCTCAAATGTGCCAAGTGTG...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTATGTCGGAAAGCTGTTTaGATGCCCAGCGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLCRKAV*MPSEEG
Trigger: TCCCTCCTCGCTGGGCATTCAAACAGCTTTCCGACA...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTTCAGGGGACATTGATTaGATGCCAAGTCGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSSGDID*MPSRLL
Trigger: CAGCAGGCGACTTGGCATTCAATCAATGTCCCCTGA...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACACAATCGGCATCTAAATaGATCCTGAACCTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTQSASK*ILNLSP
Trigger: CGGAGAGAGGTTCAGGATGCATTTAGATGCCGATTG...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACATCCTGTTATTGTGGCTaGTCGGCAAGGACCAATATC +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTSCYCG*SARTNI
Trigger: GATATTGGTCCTTGCCGAGCAGCCACAATAACAGGA...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGATACTCATGGGCATGTaGAAACCTGTGGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELILMGM*KPVGCW
Trigger: CCAGCAACCCACAGGTTTGCACATGCCCATGAGTAT...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGCTGGACACCATCAGATaGAGGGATGTAACTTGCCCT +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELLDTIR*RDVTCP
Trigger: AGGGCAAGTTACATCCCTGCATCTGATGGTGTCCAG...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATTTTTACATCCCTGGGTaGACCACGTTCCCAAAGACT +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYFYIPG*TTFPKT
Trigger: AGTCTTTGGGAACGTGGTCCACCCAGGGATGTAAAA...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTATGGCGTTACTGGCGGTaGTGGCTGACAAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLWRYWR*WLTKLL
Trigger: CAACAGCTTTGTCAGCCACCACCGCCAGTAACGCCA...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAGATTGCAGACTTGGGTaGTTTGCAGCTCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRDCRLG*FAAPGS
Trigger: TGACCCAGGAGCTGCAAACCACCCAAGTCTGCAATC...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATATTTCTCTAGGTTGCTaGGCCAAAATGGCGAAGGTA +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYISLGC*AKMAKV
Trigger: TACCTTCGCCATTTTGGCTCAGCAACCTAGAGAAAT...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACATCCTTTTGTTCTGGTaGAGCCTACTGATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNILLFW*SLLMWP
Trigger: TGGCCACATCAGTAGGCTTCACCAGAACAAAAGGAT...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACAGACCGGCTCTGTGTTTaGGCTTTTTATCTAGGATTC +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTDRLCV*AFYLGF
Trigger: GAATCCTAGATAAAAAGCTCAAACACAGAGCCGGTC...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGACACACTTGGCACATTTaGGCGTCAAACCGCTATGAG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRHTWHI*ASNRYE
Trigger: CTCATAGCGGTTTGACGCTCAAATGTGCCAAGTGTG...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATCATCTAAATGCATCCTaGACCTCTCTCCGAAGAATG +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYHLNAS*TSLRRM
Trigger: CATTCTTCGGAGAGAGGTTCAGGATGCATTTAGATG...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATGGACCAATATCCTTATaGAGAACTGATCGACAGGCA +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYGPISL*RTDRQA
Trigger: TGCCTGTCGATCAGTTCTTCATAAGGATATTGGTCC...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGACCAACTCAGAGGCCATaGAATTCTTCACAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRPTQRP*NSSQLC
Trigger: GCACAGCTGTGAAGAATTTCATGGCCTCTGAGTTGG...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATCTGTGTCTAAGACATTaGTTGTGGTGTAATGCGGGT +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYLCLRH*LWCNAG
Trigger: ACCCGCATTACACCACAATCAATGTCTTAGACACAG...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAGTGTGTCCCGTAAGGTaGTACACAAGTTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRVCPVR*YTSSGS
Trigger: CGAACCAGAACTTGTGTATCACCTTACGGGACACAC...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAGTTATCACTGCACCCTaGCAGGTCCTTATTCGCCTT +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRVITAP*QVLIRL
Trigger: AAGGCGAATAAGGACCTGTCAGGGTGCAGTGATAAC...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTGCATTCAGGGGACATTaGTTGAATGCCAAGTCGCCT +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSAFRGH*LNAKSP
Trigger: AGGCGACTTGGCATTCAATCAATGTCCCCTGAATGC...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCAGGACAACAGCGGCTaGAGGTCCCACAAAAGCATA +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYQDNSG*RSHKSI
Trigger: TATGCTTTTGTGGGACCTGCAGCCGCTGTTGTCCTG...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACCAATCGGCATCTAAATaGATCCTGAACCTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNQSASK*ILNLSP
Trigger: CGGAGAGAGGTTCAGGATGCATTTAGATGCCGATTG...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACACGAACTCGAAGAATCTaGATTGATGGGATCCTGACA +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTRTRRI*IDGILT
Trigger: TGTCAGGATCCCATCAATGCAGATTCTTCGAGTTCG...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACATGCAAACCTGTGGGTTaGTGGATGATGACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTCKPVG*WMMTLE
Trigger: TTCCAAAGTCATCATCCAGCAACCCACAGGTTTGCA...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAATACTCATGGGCATGTaGAAACCTGTGGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRILMGM*KPVGCW
Trigger: CCAGCAACCCACAGGTTTGCACATGCCCATGAGTAT...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGCAATAGCCTTTCATaGGGCAAGGTTTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNCNSLS*GKVSMP
Trigger: TGGCATGGAAACCTTGCCGCATGAAAGGCTATTGCA...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGTCAAAGGGCAAATTCTaGATATGTTCCTGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELSKGKF*ICSWGA
Trigger: CGCACCCCAGGAACATATGCAGAATTTGCCCTTTGA...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACATGGATTCTTGTTTGGTaGGGGGTTTTCCATACTGCT +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTWILVW*GVFHTA
Trigger: AGCAGTATGGAAAACCCCGCACCAAACAAGAATCCA...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGACCCGTTCCTTCACATTaGTGCCCTGTTATCACTGCA +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRPVPSH*CPVITA
Trigger: TGCAGTGATAACAGGGCAGCAATGTGAAGGAACGGG...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAGGCATCGCTGCTCATTaGATCTTCTCACTTCTTCGC +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRGIAAH*IFSLLR
Trigger: GCGAAGAAGTGAGAAGATGCAATGAGCAGCGATGCC...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTAGGTGCAGGGCATCGCTaGTCATTGCATCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLGAGHR*SLHLLT
Trigger: AGTGAGAAGATGCAATGAGCAGCGATGCCCTGCACC...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAGGGACATTGATTGAATaGCAAGTCGCCTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRGTLIE*QVACWS
Trigger: ACTCCAGCAGGCGACTTGGCATTCAATCAATGTCCC...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACACTGCTTCTTTGCCCTaGGGCAGAAGCATTAAGCTA +
Preference number: 4 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNTASLP*GRSIKL
Trigger: TAGCTTAATGCTTCTGCCCCAGGGCAAAGAAGCAGT...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238918.12
CDS-3UTR CCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGACAGTTTTACATCCCTaGGTGGACCACGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELTVLHP*VDHVPK
Trigger: TTTGGGAACGTGGTCCACCCAGGGATGTAAAACTGT...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGGCTCATTCATACTCATaGGCATGTGCAAACCTGTGG +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELAHSYS*ACANLW
Trigger: CCACAGGTTTGCACATGCCCATGAGTATGAATGAGC...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATCCATGGATTCTTGTTTaGTGCGGGGTTTTCCATACT +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYPWILV*CGVFHT
Trigger: AGTATGGAAAACCCCGCACCAAACAAGAATCCATGG...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTCTCCCACTCTGCTaGCCTCAGTTCCAAAGCATC +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYLLPLC*PQFQSI
Trigger: GATGCTTTGGAACTGAGGCCAGCAGAGTGGGAGAAG...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACATGGCAACCAAACTaGCTTGGGCTGACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRTWQPN*LGLTLF
Trigger: GAACAAGGTCAGCCCAAGCCAGTTTGGTTGCCATGT...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTAAATTCTTCTTTGGGTaGTCGCTTGGCCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSKFFFG*SLGLPG
Trigger: ACCAGGGAGGCCAAGCGACCACCCAAAGAAGAATTT...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTAGAACATGTGCTCCACTaGGACCACTCTTCCACACCA +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLEHVLH*DHSSTP
Trigger: TGGTGTGGAAGAGTGGTCCCAGTGGAGCACATGTTC...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATCTCTTATTATGTGTCTaGGTCTGTCCAACCAGTATG +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYLLLCV*VCPTSM
Trigger: CATACTGGTTGGACAGACTCAGACACATAATAAGAG...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACACTCTTATTATGTGTCTaGGTCTGTCCAACCAGTATG +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTLLLCV*VCPTSM
Trigger: CATACTGGTTGGACAGACTCAGACACATAATAAGAG...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATCAAAACCCAACAGAATaGAGCCAGGAAGAAAAAGTG +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYQNPTE*SQEEKV
Trigger: CACTTTTTCTTCCTGGCTTCATTCTGTTGGGTTTTG...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACAGTTACAGCCATATATaGTTGCCACGCCTCAGTCAA +
Preference number: 4 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNSYSHI*LPRLSQ
Trigger: TTGACTGAGGCGTGGCAATCATATATGGCTGTAACT...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAATCCTTTTGTTCTGGTaGAGCCTACTGATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRILLFW*SLLMWP
Trigger: TGGCCACATCAGTAGGCTTCACCAGAACAAAAGGAT...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTGCATTGATGGGATCCTaGCAGTTTCTCAATCGGCAT +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSALMGS*QFLNRH
Trigger: ATGCCGATTGAGAAACTGTCAGGATCCCATCAATGC...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGTCGAAGAATCTGCATTaGTGGGATCCTGACAGTTTC +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELSKNLH*WDPDSF
Trigger: GAAACTGTCAGGATCCCATCAATGCAGATTCTTCGA...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACAAAGTCTGTCATGATTTaGGCATGCCCATTAGGAAAC +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTKSVMI*ACPLGN
Trigger: GTTTCCTAATGGGCATGCTCAAATCATGACAGACTT...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATTCCATCATTCTTTCTTaGGGATGGACTATGTCCATG +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYSIILS*GWTMSM
Trigger: CATGGACATAGTCCATCCTCAAGAAAGAATGATGGA...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGCTGTGTCTAAGACATTaGTTGTGGTGTAATGCGGGT +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELLCLRH*LWCNAG
Trigger: ACCCGCATTACACCACAATCAATGTCTTAGACACAG...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTATCCCTTCACCAAAGTTaGACACCAGAAGTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLSLHQS*TPEVLG
Trigger: GCCCAAGACTTCTGGTGTTCAACTTTGGTGAAGGGA...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACCTGATAAGCCAGGAGTaGAAAGTTAGAGCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNLISQE*KVRAAK
Trigger: CTTAGCTGCTCTAACTTTTCACTCCTGGCTTATCAG...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCACTCTCCCAAATGCTaGGGGCAGGTGCATTTTGTA +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYHSPKC*GQVHFV
Trigger: TACAAAATGCACCTGCCCTCAGCATTTGGGAGAGTG...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGACTGAGGAGGTGTGCATaGCCTTGTTCTTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRLRRCA*PCSCSL
Trigger: CAAAGAACAAGAACAAGGTCATGCACACCTCCTCAG...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCCTCAACTGCTTCTTTaGCCTGGGGCAGAAGCATTA +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYPQLLL*PGAEAL
Trigger: TAATGCTTCTGCCCCAGGGCAAAGAAGCAGTTGAGG...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238918.12
CDS-3UTR GCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACTTTCTTTCCCTCAACTaGTTCTTTGCCCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYFLSLN*FFALGQ
Trigger: CTGCCCCAGGGCAAAGAAGCAGTTGAGGGAAAGAAA...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000238918.12
CDS-3UTR GCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGACAGCCATATATGATTaGCACGCCTCAGTCAAAACC +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELTAIYD*HASVKT
Trigger: GGTTTTGACTGAGGCGTGGCAATCATATATGGCTGT...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGATCCTGTTATTGTGGCTaGTCGGCAAGGACCAATATC +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRSCYCG*SARTNI
Trigger: GATATTGGTCCTTGCCGAGCAGCCACAATAACAGGA...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATAATTCTTCACAGCTGTaGGAGGTTCAAAGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYNSSQL*EVQRAN
Trigger: ATTTGCCCTTTGAACCTCGCACAGCTGTGAAGAATT...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACAAATTCTTCACAGCTGTaGGAGGTTCAAAGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTNSSQL*EVQRAN
Trigger: ATTTGCCCTTTGAACCTCGCACAGCTGTGAAGAATT...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGTGGATTCTTGTTTGGTaGGGGGTTTTCCATACTGCT +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELWILVW*GVFHTA
Trigger: AGCAGTATGGAAAACCCCGCACCAAACAAGAATCCA...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGTGCCCCTTAGCAAGGTaGTCTTTAATTGAATGCTGC +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELCPLAR*SLIECC
Trigger: GCAGCATTCAATTAAAGAGCACCTTGCTAAGGGGCA...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACACTCCGAAGAATGCAGTaGACCATGACTATAACAAAG +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTLRRMQ*TMTITK
Trigger: CTTTGTTATAGTCATGGTCCACTGCATTCTTCGGAG...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTAGTGTTCCTGTTATTGTaGCTGCTCGGCAAGGACCAA +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLVFLLL*LLGKDQ
Trigger: TTGGTCCTTGCCGAGCAGCCACAATAACAGGAACAC...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAGCTCATTCATACTCATaGGCATGTGCAAACCTGTGG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRAHSYS*ACANLW
Trigger: CCACAGGTTTGCACATGCCCATGAGTATGAATGAGC...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTTTCTGCATATGTTCCTaGGGTGCGAGATGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSFCICS*GARCCS
Trigger: AGAGCAACATCTCGCACCCCAGGAACATATGCAGAA...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGATTCTGCATATGTTCCTaGGGTGCGAGATGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRFCICS*GARCCS
Trigger: AGAGCAACATCTCGCACCCCAGGAACATATGCAGAA...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAAACACCACTGACGTTTaGCACATGAAGGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRNTTDV*HMKVLT
Trigger: TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTT...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACACTTACAACACAGGATaGTCAGAACTGTACACCTGG +
Preference number: 4 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNTYNTG*SELYTW
Trigger: CCAGGTGTACAGTTCTGACCATCCTGTGTTGTAAGT...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGATTACAGGAGTATTCGTaGTCGGATCGGAAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRLQEYS*SDRKAQ
Trigger: TTGAGCCTTCCGATCCGACCACGAATACTCCTGTAA...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACCTATGGCAGATTTGTTaGGGCGGTGGGTTTATTACA +
Preference number: 4 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNLWQIC*GGGFIT
Trigger: TGTAATAAACCCACCGCCCCAACAAATCTGCCATAG...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTGCAACCAAACTGGCTTaGGCTGACCTTGTTCAATAC +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSATKLA*ADLVQY
Trigger: GTATTGAACAAGGTCAGCCCAAGCCAGTTTGGTTGC...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCGCCATCACAGGACTTaGAACAACCACTCCAATGAC +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYRHHRT*NNHSND
Trigger: GTCATTGGAGTGGTTGTTCCAAGTCCTGTGATGGCG...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGAATCCAACAGTGTCTTaGTCACCTGGGACATTCCAT +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELNPTVS*SPGTFH
Trigger: ATGGAATGTCCCAGGTGACCAAGACACTGTTGGATT...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTATTTCTCTAGGTTGCTaGGCCAAAATGGCGAAGGTA +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSISLGC*AKMAKV
Trigger: TACCTTCGCCATTTTGGCTCAGCAACCTAGAGAAAT...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAGACCGGCTCTGTGTTTaGGCTTTTTATCTAGGATTC +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRDRLCV*AFYLGF
Trigger: GAATCCTAGATAAAAAGCTCAAACACAGAGCCGGTC...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACGCATTGATGGGATCCTaGCAGTTTCTCAATCGGCAT +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYALMGS*QFLNRH
Trigger: ATGCCGATTGAGAAACTGTCAGGATCCCATCAATGC...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGATCGAAGAATCTGCATTaGTGGGATCCTGACAGTTTC +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRSKNLH*WDPDSF
Trigger: GAAACTGTCAGGATCCCATCAATGCAGATTCTTCGA...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGAAGTCTGTCATGATTTaGGCATGCCCATTAGGAAAC +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELKSVMI*ACPLGN
Trigger: GTTTCCTAATGGGCATGCTCAAATCATGACAGACTT...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTGGACCAATATCCTTATaGAGAACTGATCGACAGGCA +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSGPISL*RTDRQA
Trigger: TGCCTGTCGATCAGTTCTTCATAAGGATATTGGTCC...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGTCTTCCTTGTATGCATaGCCTTCTCAAAGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELSSLYA*PSQSQG
Trigger: ACCTTGACTTTGAGAAGGTCATGCATACAAGGAAGA...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACAGTGTCTGTACTCATTTaGTATGCATCTTGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTVSVLI*YASCKA
Trigger: AGCTTTGCAAGATGCATATCAAATGAGTACAGACAC...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACGCATTTCGTATGGGATaGATCGGTAAGCACAGTTTT +
Preference number: 4 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNAFRMG*IGKHSF
Trigger: AAAACTGTGCTTACCGATGCATCCCATACGAAATGC...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACAATGCAGTGGTGGTTGTaGAGATACTCTTATTATGTG +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTMQWWL*RYSYYV
Trigger: CACATAATAAGAGTATCTGCACAACCACCACTGCAT...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTATGCAATAGCCTTTCATaGGGCAAGGTTTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLCNSLS*GKVSMP
Trigger: TGGCATGGAAACCTTGCCGCATGAAAGGCTATTGCA...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGGGGTGCGAGATGTTaGTCTAAGTTCATATTGAAC +
Preference number: 4 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNWGARC*SKFILN
Trigger: GTTCAATATGAACTTAGAGCAACATCTCGCACCCCA...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACTCAAAGGGCAAATTCTaGATATGTTCCTGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYSKGKF*ICSWGA
Trigger: CGCACCCCAGGAACATATGCAGAATTTGCCCTTTGA...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTCATACTGAGGAGGTGTaGATGACCTTGTTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSHTEEV*MTLFLF
Trigger: GAACAAGAACAAGGTCATGCACACCTCCTCAGTATG...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTATTTTACATCCCTGGGTaGACCACGTTCCCAAAGACT +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLFYIPG*TTFPKT
Trigger: AGTCTTTGGGAACGTGGTCCACCCAGGGATGTAAAA...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTAACAGTTTTACATCCCTaGGTGGACCACGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLTVLHP*VDHVPK
Trigger: TTTGGGAACGTGGTCCACCCAGGGATGTAAAACTGT...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGCATAAGCATTTCGTATaGGATGCATCGGTAAGCACA +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELHKHFV*DASVST
Trigger: TGTGCTTACCGATGCATCCCATACGAAATGCTTATG...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACAGCAAAAATGCAGTGGTaGTTGTGCAGATACTCTTAT +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTAKMQW*LCRYSY
Trigger: ATAAGAGTATCTGCACAACCACCACTGCATTTTTGC...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGAGTGCAAAAATGCAGTaGTGGTTGTGCAGATACTCT +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELSAKMQ*WLCRYS
Trigger: AGAGTATCTGCACAACCACCACTGCATTTTTGCACT...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTCCATGGATTCTTGTTTaGTGCGGGGTTTTCCATACT +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSPWILV*CGVFHT
Trigger: AGTATGGAAAACCCCGCACCAAACAAGAATCCATGG...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTAAACACCACTGACGTTTaGCACATGAAGGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLNTTDV*HMKVLT
Trigger: TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTT...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTACTTACAACACAGGATaGTCAGAACTGTACACCTGG +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSTYNTG*SELYTW
Trigger: CCAGGTGTACAGTTCTGACCATCCTGTGTTGTAAGT...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGGATTTGTTGGGGCGGTaGGTTTATTACAGGAGTATT +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELDLLGR*VYYRSI
Trigger: AATACTCCTGTAATAAACCCACCGCCCCAACAAATC...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACCAAGTACATAATACATaGCAACCAAACTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNQVHNT*QPNWLG
Trigger: CCCAAGCCAGTTTGGTTGCCATGTATTATGTACTTG...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCATACTCCGTGTACTaGACAGAGGGCAGTGTTATT +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLPYSVY*TEGSVI
Trigger: AATAACACTGCCCTCTGTCCAGTACACGGAGTATGG...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACAGTTACAGCCATATATaGTTGCCACGCCTCAGTCAA +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYSYSHI*LPRLSQ
Trigger: TTGACTGAGGCGTGGCAATCATATATGGCTGTAACT...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCATCTAAATGCATCCTaGACCTCTCTCCGAAGAATG +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYHLNAS*TSLRRM
Trigger: CATTCTTCGGAGAGAGGTTCAGGATGCATTTAGATG...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGATCTTCCTTGTATGCATaGCCTTCTCAAAGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRSSLYA*PSQSQG
Trigger: ACCTTGACTTTGAGAAGGTCATGCATACAAGGAAGA...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTATTCACTGGGGTTTTTaGAAGTGTCCCATGGATTCT +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSIHWGF*KCPMDS
Trigger: AGAATCCATGGGACACTTTCAAAAACCCCAGTGAAT...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGAATACGATCCATAAATaGCTCCCTTCACCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELNTIHK*LPSPKL
Trigger: CAACTTTGGTGAAGGGAGTCATTTATGGATCGTATT...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCAAACTGGCTTGGGCTaGCCTTGTTCAATACCAAAA +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYQTGLG*PCSIPK
Trigger: TTTTGGTATTGAACAAGGTCAGCCCAAGCCAGTTTG...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACATGCATTTTGTATACATaGTCCCACATGATTCTGTTC +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTCILYT*SHMILF
Trigger: GAACAGAATCATGTGGGATCATGTATACAAAATGCA...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACGCTGCAGGAAGCTTCTaGATACTAGCCACTACATTT +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYAAGSF*ILATTF
Trigger: AAATGTAGTGGCTAGTATTCAGAAGCTTCCTGCAGC...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTATACTACCCTATCTTCTaGGTTTCTTGCCCAGTCAAC +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLYYPIF*VSCPVN
Trigger: GTTGACTGGGCAAGAAACTCAGAAGATAGGGTAGTA...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACACAGCCATATATGATTaGCACGCCTCAGTCAAAACC +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYTAIYD*HASVKT
Trigger: GGTTTTGACTGAGGCGTGGCAATCATATATGGCTGT...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAAGCAGTAGTGATCAGTaGCATATCCTTTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRSSSDQ*HILLFW
Trigger: CCAGAACAAAAGGATATGGCACTGATCACTACTGCT...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTAGCAGTAGTGATCAGTaGCATATCCTTTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSSSSDQ*HILLFW
Trigger: CCAGAACAAAAGGATATGGCACTGATCACTACTGCT...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACTGCAAACCTGTGGGTTaGTGGATGATGACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYCKPVG*WMMTLE
Trigger: TTCCAAAGTCATCATCCAGCAACCCACAGGTTTGCA...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTTGGGGTGCGAGATGTTaGTCTAAGTTCATATTGAAC +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSWGARC*SKFILN
Trigger: GTTCAATATGAACTTAGAGCAACATCTCGCACCCCA...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTCGGGGTTTTCCATACTaGTTGTATTTGGTATATCCC +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSRGFPY*LYLVYP
Trigger: GGGATATACCAAATACAAGCAGTATGGAAAACCCCG...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTGAAGGCTCAAGCTTATaGTTTTTCCTCTTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSEGSSL*FFLFPL
Trigger: AAGCGGAAAGAGGAAAAAGCATAAGCTTGAGCCTTC...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACAAGATTCACCAGTTTGTaGCATAAATTTAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTRFTSL*HKFSSI
Trigger: GATGCTGCTAAATTTATGGCACAAACTGGTGAATCT...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGAGAGGGCAGTGTTATTaGAAACCCTTGATTCTCTTA +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELRGQCY*KPLILL
Trigger: TAAGAGAATCAAGGGTTTGCAATAACACTGCCCTCT...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGTGTACTCATTTGATATaGATCTTGCAAAGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELCTHLI*ILQSSA
Trigger: AGCCGAGCTTTGCAAGATGCATATCAAATGAGTACA...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTAAACCTGTGGGTTGCTaGATGATGACTTTGGAAATG +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSKPVGC*MMTLEM
Trigger: CATTTCCAAAGTCATCATCCAGCAACCCACAGGTTT...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAAAACCTGTGGGTTGCTaGATGATGACTTTGGAAATG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRKPVGC*MMTLEM
Trigger: CATTTCCAAAGTCATCATCCAGCAACCCACAGGTTT...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACAAGTTCATATTGAACTaGTCCATTACAGGGGGATTC +
Preference number: 4 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNKFILN*SITGGF
Trigger: GAATCCCCCTGTAATGGACCAGTTCAATATGAACTT...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATCATACTGCTTGTATTTaGTATATCCCGAAATCTGTC +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYHTACI*YIPKSV
Trigger: GACAGATTTCGGGATATACCAAATACAAGCAGTATG...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACATATTTGGTTGGATCTaGATTTTCCAGCGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNIFGWI*IFQRPS
Trigger: ACTTGGACGCTGGAAAATCCAGATCCAACCAAATAT...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATTCCTGGGAAATTAGTTaGAAATACTCGACGTATTTG +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYSWEIS*KYSTYL
Trigger: CAAATACGTCGAGTATTTCCAACTAATTTCCCAGGA...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACGATTCCATTGACCATTaGCTGTACATTCAGGGTTAT +
Preference number: 4 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNDSIDH*LYIQGY
Trigger: ATAACCCTGAATGTACAGCCAATGGTCAATGGAATC...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAAAGACTCGTTCGTTTTaGAGTCATCCCACAATACAC +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRKTRSF*SHPTIH
Trigger: GTGTATTGTGGGATGACTCCAAAACGAACGAGTCTT...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTATCCATCATTCTTTCTTaGGGATGGACTATGTCCATG +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLSIILS*GWTMSM
Trigger: CATGGACATAGTCCATCCTCAAGAAAGAATGATGGA...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACATTCACTGGGGTTTTTaGAAGTGTCCCATGGATTCT +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYIHWGF*KCPMDS
Trigger: AGAATCCATGGGACACTTTCAAAAACCCCAGTGAAT...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAAGGTTGCTAACTATTTaGAAGAAGTTCTGGACACCA +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRRLLTI*KKFWTP
Trigger: TGGTGTCCAGAACTTCTTTCAAATAGTTAGCAACCT...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACGTACCATTAGCCAAATaGGCTAGTTCTATCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYVPLAK*ASSISR
Trigger: TCTGGAGATAGAACTAGCTCATTTGGCTAATGGTAC...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTAGCATTTCGTATGGGATaGATCGGTAAGCACAGTTTT +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLAFRMG*IGKHSF
Trigger: AAAACTGTGCTTACCGATGCATCCCATACGAAATGC...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACAACTATAACAAAGCCTTaGAATGAATCAAACACAGCA +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTTITKP*NESNTA
Trigger: TGCTGTGTTTGATTCATTGCAAGGCTTTGTTATAGT...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACGGGGTTTTCCATACTaGTTGTATTTGGTATATCCC +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLRGFPY*LYLVYP
Trigger: GGGATATACCAAATACAAGCAGTATGGAAAACCCCG...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACAGTGCAAAAATGCAGTaGTGGTTGTGCAGATACTCT +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYSAKMQ*WLCRYS
Trigger: AGAGTATCTGCACAACCACCACTGCATTTTTGCACT...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATGTATTTGAAACAATATaGAGCGTTTATCTGTCATGG +
Preference number: 4 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYVFETI*SVYLSW
Trigger: CCATGACAGATAAACGCTCCATATTGTTTCAAATAC...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACATCTTTCATTGAAGGCTaGTTATTTACAGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTSFIEG*LFTELL
Trigger: CAGAAGTTCTGTAAATAACCAGCCTTCAATGAAAGA...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAAAGTTCATATTGAACTaGTCCATTACAGGGGGATTC +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRKFILN*SITGGF
Trigger: GAATCCCCCTGTAATGGACCAGTTCAATATGAACTT...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGACTTGTTCTTGTTCTTTaGCCTCGACCACATGTAAAT +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRLVLVL*PRPHVN
Trigger: ATTTACATGTGGTCGAGGCCAAAGAACAAGAACAAG...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCCACTGTCCATCAACTaGGCAAAGAGCAATATTACA +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYPLSIN*AKSNIT
Trigger: TGTAATATTGCTCTTTGCCCAGTTGATGGACAGTGG...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGATGCTCTTTAATTGAATaGTGCAAGTGTCTGTACTCA +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRCSLIE*CKCLYS
Trigger: TGAGTACAGACACTTGCAGCATTCAATTAAAGAGCA...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTAGCAAAAATGCAGTGGTaGTTGTGCAGATACTCTTAT +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLAKMQW*LCRYSY
Trigger: ATAAGAGTATCTGCACAACCACCACTGCATTTTTGC...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGTATTTACAGAACTTCTaGGCATCACAATATAGTCAC +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELYLQNF*ASQYSH
Trigger: GTGACTATATTGTGATGCCCAGAAGTTCTGTAAATA...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGTCTTTCATTGAAGGCTaGTTATTTACAGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELSFIEG*LFTELL
Trigger: CAGAAGTTCTGTAAATAACCAGCCTTCAATGAAAGA...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACAAACGAAAGCATTCTTaGAATTGCAGAGTTGCATTA +
Preference number: 4 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNKRKHS*NCRVAL
Trigger: TAATGCAACTCTGCAATTCCAAGAATGCTTTCGTTT...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR TCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTAATATTACAAGGCTTATaGTGTGTTTCAGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLILQGL*CVSGPS
Trigger: TGAAGGACCTGAAACACATCATAAGCCTTGTAATAT...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR GCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTACTATAACAAAGCCTTaGAATGAATCAAACACAGCA +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSTITKP*NESNTA
Trigger: TGCTGTGTTTGATTCATTGCAAGGCTTTGTTATAGT...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR GCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTAAATCTTCAATCACCTaGATTAACTCTATTGACCCT +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSKSSIT*INSIDP
Trigger: AGGGTCAATAGAGTTAATGCAGGTGATTGAAGATTT...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTGTATTTGAAACAATATaGAGCGTTTATCTGTCATGG +
Preference number: 4 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSVFETI*SVYLSW
Trigger: CCATGACAGATAAACGCTCCATATTGTTTCAAATAC...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CCA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTAAATGCTATATTTGGTTaGATCTGGATTTTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLNAIFG*IWIFQR
Trigger: ACGCTGGAAAATCCAGATCCAACCAAATATAGCATT...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CCA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACTATTTACAGAACTTCTaGGCATCACAATATAGTCAC +
Preference number: 4 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYYLQNF*ASQYSH
Trigger: GTGACTATATTGTGATGCCCAGAAGTTCTGTAAATA...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS GCA 90 bp GCTTTCTGCCCATGGCCCTCTGCATTCGGAGCCTCCATGGGCAGCTaGAGTGCACTGCCGGCTTCTCTGCTGAGTCCCATTCGAGCACGT +
Preference number: 5 (lower is better)
Translates to: AFCPWPSAFGASMGS*SALPASLLSPIRAR
Trigger: ACGTGCTCGAATGGGACTCAGCAGAGAAGCCGGCAGTGCACTGCAGCTGCCCATGGAGGCTCCGAATGCAGAGGGCCATGGGCAGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS TCA 90 bp TCGGAGCCTCCATGGGCAGCTGCAGTGCACTGCCGGCTTCTCTGCTaGGTCCCATTCGAGCACGTTACTGAGCACTGGCTCCACGAACTC +
Preference number: 5 (lower is better)
Translates to: SEPPWAAAVHCRLLC*VPFEHVTEHWLHEL
Trigger: GAGTTCGTGGAGCCAGTGCTCAGTAACGTGCTCGAATGGGACTCAGCAGAGAAGCCGGCAGTGCACTGCAGCTGCCCATGGAGGCTCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS TCA 90 bp GCTCTTGCTCTAAGACACCAGCACAGGCACGCGTCCCAGCAACAGTaGCGGAGAGACTCCCCTTCGGTCCCAATCACCGTTGCCCATTTT +
Preference number: 5 (lower is better)
Translates to: ALALRHQHRHASQQQ*RRDSPSVPITVAHF
Trigger: AAAATGGGCAACGGTGATTGGGACCGAAGGGGAGTCTCTCCGTCACTGTTGCTGGGACGCGTGCCTGTGCTGGTGTCTTAGAGCAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370598.6
ENST00000684661.1
CDS GCA 90 bp TACATTCAGGGTTATAGCACTCTCTGCTTTCTGCCCATGGCCCTCTaGATTCGGAGCCTCCATGGGCAGCTGCAGTGCACTGCCGGCTTC +
Preference number: 5 (lower is better)
Translates to: YIQGYSTLCFLPMAL*IRSLHGQLQCTAGF
Trigger: GAAGCCGGCAGTGCACTGCAGCTGCCCATGGAGGCTCCGAATGCAGAGGGCCATGGGCAGAAAGCAGAGAGTGCTATAACCCTGAATGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS TCA 90 bp AGTGCACTGCCGGCTTCTCTGCTGAGTCCCATTCGAGCACGTTACTaGGCACTGGCTCCACGAACTCCACTCTTGCCACTGTCCATCAAC +
Preference number: 5 (lower is better)
Translates to: SALPASLLSPIRARY*ALAPRTPLLPLSIN
Trigger: GTTGATGGACAGTGGCAAGAGTGGAGTTCGTGGAGCCAGTGCTCAGTAACGTGCTCGAATGGGACTCAGCAGAGAAGCCGGCAGTGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 90 bp AGTCTCTTCCACTGTTCTTCCACTCCGAAAGCTCAGGGAGGCTCTTaGTCTAAGACACCAGCACAGGCACGCGTCCCAGCAACAGTGACG +
Preference number: 5 (lower is better)
Translates to: SLFHCSSTPKAQGGS*SKTPAQARVPATVT
Trigger: CGTCACTGTTGCTGGGACGCGTGCCTGTGCTGGTGTCTTAGAGCAAGAGCCTCCCTGAGCTTTCGGAGTGGAAGAACAGTGGAAGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370598.6
ENST00000684661.1
CDS TCA 90 bp TCTTCGCCCGTTCCTTCACATTGCTGCCCTGTTATCACTGCACCCTaGCAGGTCCTTATTCGCCTTTCCCAGCCGCCATCACAGGACTTG +
Preference number: 5 (lower is better)
Translates to: SSPVPSHCCPVITAP*QVLIRLSQPPSQDL
Trigger: CAAGTCCTGTGATGGCGGCTGGGAAAGGCGAATAAGGACCTGTCAGGGTGCAGTGATAACAGGGCAGCAATGTGAAGGAACGGGCGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 90 bp TCTCACTTCTTCGCCCGTTCCTTCACATTGCTGCCCTGTTATCACTaGACCCTGACAGGTCCTTATTCGCCTTTCCCAGCCGCCATCACA +
Preference number: 5 (lower is better)
Translates to: SHFFARSFTLLPCYH*TLTGPYSPFPAAIT
Trigger: TGTGATGGCGGCTGGGAAAGGCGAATAAGGACCTGTCAGGGTGCAGTGATAACAGGGCAGCAATGTGAAGGAACGGGCGAAGAAGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 90 bp GATTCCATTGACCATTGGCTGTACATTCAGGGTTATAGCACTCTCTaGTTTCTGCCCATGGCCCTCTGCATTCGGAGCCTCCATGGGCAG +
Preference number: 5 (lower is better)
Translates to: DSIDHWLYIQGYSTL*FLPMALCIRSLHGQ
Trigger: CTGCCCATGGAGGCTCCGAATGCAGAGGGCCATGGGCAGAAAGCAGAGAGTGCTATAACCCTGAATGTACAGCCAATGGTCAATGGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 90 bp GCGTCTGCTAGTGGTGCCTGTGGCATTCAGGGGACATTGATTGAATaGCAAGTCGCCTGCTGGAGTTCTTTTCCACACCATCGACATCAG +
Preference number: 5 (lower is better)
Translates to: ASASGACGIQGTLIE*QVACWSSFPHHRHQ
Trigger: CTGATGTCGATGGTGTGGAAAAGAACTCCAGCAGGCGACTTGGCATTCAATCAATGTCCCCTGAATGCCACAGGCACCACTAGCAGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 90 bp CCTGACAGGTCCTTATTCGCCTTTCCCAGCCGCCATCACAGGACTTaGAACAACCACTCCAATGACCCCACTGATTCCATTGACCATTGG +
Preference number: 5 (lower is better)
Translates to: PDRSLFAFPSRHHRT*NNHSNDPTDSIDHW
Trigger: CCAATGGTCAATGGAATCAGTGGGGTCATTGGAGTGGTTGTTCCAAGTCCTGTGATGGCGGCTGGGAAAGGCGAATAAGGACCTGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 90 bp GGTGCCTGTGGCATTCAGGGGACATTGATTGAATGCCAAGTCGCCTaGTGGAGTTCTTTTCCACACCATCGACATCAGATAATCCTCAGG +
Preference number: 5 (lower is better)
Translates to: GACGIQGTLIECQVA*WSSFPHHRHQIILR
Trigger: CCTGAGGATTATCTGATGTCGATGGTGTGGAAAAGAACTCCAGCAGGCGACTTGGCATTCAATCAATGTCCCCTGAATGCCACAGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 90 bp GCCTGTGGCATTCAGGGGACATTGATTGAATGCCAAGTCGCCTGCTaGAGTTCTTTTCCACACCATCGACATCAGATAATCCTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: ACGIQGTLIECQVAC*SSFPHHRHQIILRA
Trigger: TGCCCTGAGGATTATCTGATGTCGATGGTGTGGAAAAGAACTCCAGCAGGCGACTTGGCATTCAATCAATGTCCCCTGAATGCCACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 90 bp AAGCATTTCGTATGGGATGCATCGGTAAGCACAGTTTTACATCCCTaGGTGGACCACGTTCCCAAAGACTCGTTCCTGCAAAGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: KHFVWDASVSTVLHP*VDHVPKDSFLQRGV
Trigger: CACTCCCCTTTGCAGGAACGAGTCTTTGGGAACGTGGTCCACCCAGGGATGTAAAACTGTGCTTACCGATGCATCCCATACGAAATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604969.1
CDS TCA 90 bp TGGCTGACAAAGCTGTTGTTGAAACTACTCCACACTTGGCACATTTaGGCGTCAAACCGCTATGAGGCTCACTCATCTGACCGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: WLTKLLLKLLHTWHI*ASNRYEAHSSDRLC
Trigger: ACAGAGCCGGTCAGATGAGTGAGCCTCATAGCGGTTTGACGCTCAAATGTGCCAAGTGTGGAGTAGTTTCAACAACAGCTTTGTCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
CDS GCA 90 bp AGAGGGCAGTGTTATTGCAAACCCTTGATTCTCTTAATGGGCCGCTaGAGTGTGTCCCGTAAGGTGATACACAAGTTCTGGTTCGCACCT +
Preference number: 5 (lower is better)
Translates to: RGQCYCKPLILLMGR*SVSRKVIHKFWFAP
Trigger: AGGTGCGAACCAGAACTTGTGTATCACCTTACGGGACACACTGCAGCGGCCCATTAAGAGAATCAAGGGTTTGCAATAACACTGCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS TCA 90 bp GAGAGAGCCAGCAGTAGTGATCAGTGCCATATCCTTTTGTTCTGGTaGAGCCTACTGATGTGGCCACTACTAATGCTGGTAAACCCCATC +
Preference number: 5 (lower is better)
Translates to: ERASSSDQCHILLFW*SLLMWPLLMLVNPI
Trigger: GATGGGGTTTACCAGCATTAGTAGTGGCCACATCAGTAGGCTTCACCAGAACAAAAGGATATGGCACTGATCACTACTGCTGGCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS TCA 90 bp TGGCTGACAAAGCTGTTGTTGAAACTACTCCACACTTGGCACATTTaGGCGTCAAACCGCTATGAGGCTCACTCATCCGGCTCTGTGTTT +
Preference number: 5 (lower is better)
Translates to: WLTKLLLKLLHTWHI*ASNRYEAHSSGSVF
Trigger: AAACACAGAGCCGGATGAGTGAGCCTCATAGCGGTTTGACGCTCAAATGTGCCAAGTGTGGAGTAGTTTCAACAACAGCTTTGTCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684661.1
CDS CCA 90 bp AAGCATTTCGTATGGGATGCATCGGTAAGCACAGTTTTACATCCCTaGGTGGACCACGTTCCCAAAGACTCGTTCCTAAGCTTCCTACTC +
Preference number: 5 (lower is better)
Translates to: KHFVWDASVSTVLHP*VDHVPKDSFLSFLL
Trigger: GAGTAGGAAGCTTAGGAACGAGTCTTTGGGAACGTGGTCCACCCAGGGATGTAAAACTGTGCTTACCGATGCATCCCATACGAAATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238918.12
CDS CCA 90 bp TATGGCAGATTTGTTGGGGCGGTGGGTTTATTACAGGAGTATTCGTaGTCGGATCGGAAGGCTCAAGCTTATGCTTTTTCCTCTTTCCGC +
Preference number: 5 (lower is better)
Translates to: YGRFVGAVGLLQEYS*SDRKAQAYAFSSFR
Trigger: GCGGAAAGAGGAAAAAGCATAAGCTTGAGCCTTCCGATCCGACCACGAATACTCCTGTAATAAACCCACCGCCCCAACAAATCTGCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370598.6
ENST00000684661.1
CDS CCA 90 bp AAGCATTTCGTATGGGATGCATCGGTAAGCACAGTTTTACATCCCTaGGTGGACCACGTTCCCAAAGACTCGTTCGTTTTGGAGTCATCC +
Preference number: 5 (lower is better)
Translates to: KHFVWDASVSTVLHP*VDHVPKDSFVLESS
Trigger: GGATGACTCCAAAACGAACGAGTCTTTGGGAACGTGGTCCACCCAGGGATGTAAAACTGTGCTTACCGATGCATCCCATACGAAATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS-3UTR CAA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTGCAGACTTGGGTGGTTaGCAGCTCCTGGGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSADLGG*QLLGQA
Trigger: TGCCTGACCCAGGAGCTGCAAACCACCCAAGTCTGC...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS CCA 90 bp AAGCATTTCGTATGGGATGCATCGGTAAGCACAGTTTTACATCCCTaGGTGGACCACGTTCCCAAAGACTCGTTCTTGTTGTTGAACAGG +
Preference number: 5 (lower is better)
Translates to: KHFVWDASVSTVLHP*VDHVPKDSFLLLNR
Trigger: CCTGTTCAACAACAAGAACGAGTCTTTGGGAACGTGGTCCACCCAGGGATGTAAAACTGTGCTTACCGATGCATCCCATACGAAATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603207.1
CDS-3UTR CAA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATGTGTCCCATGGATTCTaGTTTGGTGCGGGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYVSHGF*FGAGFS
Trigger: GGAAAACCCCGCACCAAACAAGAATCCATGGGACAC...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACATGTCGGAAAGCTGTTaGAATGCCCAGCGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNMSESC*NAQRGG
Trigger: CCCTCCTCGCTGGGCATTCAAACAGCTTTCCGACAT...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACCAGGAGCCCAGAACCTaGCGCCGTATCCAACTGAAT +
Preference number: 5 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNQEPRT*RRIQLN
Trigger: ATTCAGTTGGATACGGCGCAAGGTTCTGGGCTCCTG...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCGGTCCCAATCACCGTaGCCCATTTTCCCCGGCTCA +
Preference number: 5 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYRSQSP*PIFPGS
Trigger: TGAGCCGGGGAAAATGGGCAACGGTGATTGGGACCG...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTCTTTGGGTGGTCGCTaGGCCTCCCTGGTAAGATTG +
Preference number: 5 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNSLGGR*ASLVRL
Trigger: CAATCTTACCAGGGAGGCCAAGCGACCACCCAAAGA...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTCGCACCTGCGACCCTaGACCACAAGTAACCGAACA +
Preference number: 5 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNSHLRP*TTSNRT
Trigger: TGTTCGGTTACTTGTGGTCAAGGGTCGCAGGTGCGA...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATGGCATTCAGGGGACATaGATTGAATGCCAAGTCGCC +
Preference number: 5 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYGIQGT*IECQVA
Trigger: GGCGACTTGGCATTCAATCAATGTCCCCTGAATGCC...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGATGCCAATCACCATGTaGACCAGGACAACAGCGGCT +
Preference number: 5 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELMPITM*TRTTAA
Trigger: AGCCGCTGTTGTCCTGGTCAACATGGTGATTGGCAT...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATGTGCAAACCTGTGGGTaGCTGGATGATGACTTTGGA +
Preference number: 5 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYVQTCG*LDDDFG
Trigger: TCCAAAGTCATCATCCAGCAACCCACAGGTTTGCAC...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACACTCCCTTCACCAAAGTaGAACACCAGAAGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTLPSPK*NTRSLG
Trigger: CCCAAGACTTCTGGTGTTCAACTTTGGTGAAGGGAG...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACGGTAAGATTGCAGACTaGGGTGGTTTGCAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNGKIAD*GGLQLL
Trigger: CAGGAGCTGCAAACCACCCAAGTCTGCAATCTTACC...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATATTCCAAATTCTTCTTaGGGTGGTCGCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYIPNSS*GGRLAS
Trigger: GGAGGCCAAGCGACCACCCAAAGAAGAATTTGGAAT...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTCCACGAACTCCACTCTaGCCACTGTCCATCAACTGG +
Preference number: 5 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSPRTPL*PLSINW
Trigger: CCAGTTGATGGACAGTGGCAAGAGTGGAGTTCGTGG...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACGGGCATCGCTGCTCATaGCATCTTCTCACTTCTTCG +
Preference number: 5 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNGHRCS*HLLTSS
Trigger: CGAAGAAGTGAGAAGATGCAATGAGCAGCGATGCCC...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS GCA 90 bp GCCATGAAATTCTTCACAGCTGTGCGAGGTTCAAAGGGCAAATTCTaGATATGTTCCTGGGGTGCGAGATGTTGCTCTAAGTTCATATTG +
Preference number: 5 (lower is better)
Translates to: AMKFFTAVRGSKGKF*ICSWGARCCSKFIL
Trigger: CAATATGAACTTAGAGCAACATCTCGCACCCCAGGAACATATGCAGAATTTGCCCTTTGAACCTCGCACAGCTGTGAAGAATTTCATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 90 bp TTCACAGCTGTGCGAGGTTCAAAGGGCAAATTCTGCATATGTTCCTaGGGTGCGAGATGTTGCTCTAAGTTCATATTGAACTGGTCCATT +
Preference number: 5 (lower is better)
Translates to: FTAVRGSKGKFCICS*GARCCSKFILNWSI
Trigger: AATGGACCAGTTCAATATGAACTTAGAGCAACATCTCGCACCCCAGGAACATATGCAGAATTTGCCCTTTGAACCTCGCACAGCTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAATGCCAATCACCATGTaGACCAGGACAACAGCGGCT +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRMPITM*TRTTAA
Trigger: AGCCGCTGTTGTCCTGGTCAACATGGTGATTGGCAT...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGAAAGTGTTCCTGTTATaGTGGCTGCTCGGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELKVFLL*WLLGKD
Trigger: GTCCTTGCCGAGCAGCCACAATAACAGGAACACTTT...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGCCCATGGATTCTTGTTaGGTGCGGGGTTTTCCATAC +
Preference number: 5 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELPMDSC*VRGFPY
Trigger: GTATGGAAAACCCCGCACCAAACAAGAATCCATGGG...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAGCTGCTATGGCAGATTaGTTGGGGCGGTGGGTTTAT +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRAAMAD*LGRWVY
Trigger: ATAAACCCACCGCCCCAACAAATCTGCCATAGCAGC...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACATTTAGCAGCATCAGCTaGTTCCTGAGGGACCCTTTT +
Preference number: 5 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTFSSIS*FLRDPF
Trigger: AAAAGGGTCCCTCAGGAACAAGCTGATGCTGCTAAA...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACGAGGTGTGCATGACCTaGTTCTTGTTCTTTGGCCTC +
Preference number: 5 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNEVCMT*FLFFGL
Trigger: GAGGCCAAAGAACAAGAACAAGGTCATGCACACCTC...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTAGCCCGTTCCTTCACATaGCTGCCCTGTTATCACTGC +
Preference number: 5 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLARSFT*LPCYHC
Trigger: GCAGTGATAACAGGGCAGCAATGTGAAGGAACGGGC...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS GCA 90 bp GGTTCAAAGGGCAAATTCTGCATATGTTCCTGGGGTGCGAGATGTTaGTCTAAGTTCATATTGAACTGGTCCATTACAGGGGGATTCATA +
Preference number: 5 (lower is better)
Translates to: GSKGKFCICSWGARC*SKFILNWSITGGFI
Trigger: TATGAATCCCCCTGTAATGGACCAGTTCAATATGAACTTAGAGCAACATCTCGCACCCCAGGAACATATGCAGAATTTGCCCTTTGAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS-3UTR CAA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACACTGACAAAGCTGTTGTaGAAACTACTCCACACTTGG +
Preference number: 5 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTLTKLL*KLLHTW
Trigger: CCAAGTGTGGAGTAGTTTCAACAACAGCTTTGTCAG...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAAAAGTGTTCCTGTTATaGTGGCTGCTCGGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRKVFLL*WLLGKD
Trigger: GTCCTTGCCGAGCAGCCACAATAACAGGAACACTTT...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATTGCTGGATGATGACTTaGGAAATGACATTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYCWMMT*EMTFPG
Trigger: GCCTGGAAATGTCATTTCCAAAGTCATCATCCAGCA...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTGTGCAAACCTGTGGGTaGCTGGATGATGACTTTGGA +
Preference number: 5 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSVQTCG*LDDDFG
Trigger: TCCAAAGTCATCATCCAGCAACCCACAGGTTTGCAC...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGACCCATGGATTCTTGTTaGGTGCGGGGTTTTCCATAC +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRPMDSC*VRGFPY
Trigger: GTATGGAAAACCCCGCACCAAACAAGAATCCATGGG...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTGCTATGGCAGATTTGTaGGGGCGGTGGGTTTATTAC +
Preference number: 5 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSAMADL*GRWVYY
Trigger: GTAATAAACCCACCGCCCCAACAAATCTGCCATAGC...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATCAGAGGGCAGTGTTATaGCAAACCCTTGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYQRAVL*QTLDSL
Trigger: AAGAGAATCAAGGGTTTGCAATAACACTGCCCTCTG...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACCATTTGATATGCATCTaGCAAAGCTCGGCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNHLICI*QSSAVP
Trigger: GGGAACAGCCGAGCTTTGCAAGATGCATATCAAATG...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACAAATCCAACAGTGTCTaGGTCACCTGGGACATTCCA +
Preference number: 5 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNKSNSV*VTWDIP
Trigger: TGGAATGTCCCAGGTGACCAAGACACTGTTGGATTT...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGCCAGAAACGAATCGGTaGTTTTGGGTTCAGGCCTTA +
Preference number: 5 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELPETNR*FWVQAL
Trigger: TAAGGCCTGAACCCAAAACAACCGATTCGTTTCTGG...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS TCA 90 bp TTTCACTTCTTGATAGTCCTGCATTATCATCCAACTCAGAGGCCATaGAATTCTTCACAGCTGTGCGAGGTTCAAAGGGCAAATTCTGCA +
Preference number: 5 (lower is better)
Translates to: FHFLIVLHYHPTQRP*NSSQLCEVQRANSA
Trigger: TGCAGAATTTGCCCTTTGAACCTCGCACAGCTGTGAAGAATTTCATGGCCTCTGAGTTGGATGATAATGCAGGACTATCAAGAAGTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 90 bp TGTCATGATTTGAGCATGCCCATTAGGAAACGAACTCGAAGAATCTaGATTGATGGGATCCTGACAGTTTCTCAATCGGCATCTAAATGC +
Preference number: 5 (lower is better)
Translates to: CHDLSMPIRKRTRRI*IDGILTVSQSASKC
Trigger: GCATTTAGATGCCGATTGAGAAACTGTCAGGATCCCATCAATGCAGATTCTTCGAGTTCGTTTCCTAATGGGCATGCTCAAATCATGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 90 bp TTGCTAAGCTCATTCATACTCATGGGCATGTGCAAACCTGTGGGTTaGTGGATGATGACTTTGGAAATGACATTTCCAGGCAATGTTGAA +
Preference number: 5 (lower is better)
Translates to: LLSSFILMGMCKPVG*WMMTLEMTFPGNVE
Trigger: TTCAACATTGCCTGGAAATGTCATTTCCAAAGTCATCATCCAGCAACCCACAGGTTTGCACATGCCCATGAGTATGAATGAGCTTAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS-3UTR CAA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACTCGCCTCTGACGTCCTaGACATTTCTTTCCCTCAAC +
Preference number: 5 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYSPLTS*TFLSLN
Trigger: GTTGAGGGAAAGAAATGTCAAGGACGTCAGAGGCGA...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238918.12
CDS-3UTR CAA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGGAAACTACTCCACACTaGGCACATTTGAGCGTCAAA +
Preference number: 5 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELETTPH*AHLSVK
Trigger: TTTGACGCTCAAATGTGCCAAGTGTGGAGTAGTTTC...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGTGGCTGACAAAGCTGTaGTTGAAACTACTCCACACT +
Preference number: 5 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELWLTKL*LKLLHT
Trigger: AGTGTGGAGTAGTTTCAACAACAGCTTTGTCAGCCA...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACCATTTCCAGGCAATGTaGAATAGCTTAGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNHFQAM*NSLALQ
Trigger: CTGAAGGGCTAAGCTATTCAACATTGCCTGGAAATG...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTTGAAAGTCACCCTCTaGCACATCCAGAGGCAAATT +
Preference number: 5 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNLKVTL*HIQRQI
Trigger: AATTTGCCTCTGGATGTGCAAGAGGGTGACTTTCAA...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGTTGAAAGTCACCCTCTaGCACATCCAGAGGCAAATT +
Preference number: 5 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELLKVTL*HIQRQI
Trigger: AATTTGCCTCTGGATGTGCAAGAGGGTGACTTTCAA...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTATGCATGACCTTGTTCTaGTTCTTTGGCCTCGACCAC +
Preference number: 5 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLCMTLF*FFGLDH
Trigger: GTGGTCGAGGCCAAAGAACAAGAACAAGGTCATGCA...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTACCCCACTGATTCCATaGACCATTGGCTGTACATTC +
Preference number: 5 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSTPLIP*TIGCTF
Trigger: GAATGTACAGCCAATGGTCAATGGAATCAGTGGGGT...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTATCTTCTGAGTTTCTaGCCCAGTCAACCATTCCCT +
Preference number: 5 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNYLLSF*PSQPFP
Trigger: AGGGAATGGTTGACTGGGCAAGAAACTCAGAAGATA...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACAACGAATCGGTTGTTTaGGGTTCAGGCCTTATTGTG +
Preference number: 5 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNNESVV*GSGLIV
Trigger: CACAATAAGGCCTGAACCCAAAACAACCGATTCGTT...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS GCA 90 bp CTTATAAGCCGTGTCCTAATTTTTCCAGTTACAGCCATATATGATTaGCACGCCTCAGTCAAAACCCAACAGAATGAAGCCAGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: LISRVLIFPVTAIYD*HASVKTQQNEARKK
Trigger: TTTCTTCCTGGCTTCATTCTGTTGGGTTTTGACTGAGGCGTGGCAATCATATATGGCTGTAACTGGAAAAATTAGGACACGGCTTATAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS-3UTR CAA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTCTGACAAAGCTGTTGTaGAAACTACTCCACACTTGG +
Preference number: 5 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSLTKLL*KLLHTW
Trigger: CCAAGTGTGGAGTAGTTTCAACAACAGCTTTGTCAG...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTTGCTGGATGATGACTTaGGAAATGACATTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSCWMMT*EMTFPG
Trigger: GCCTGGAAATGTCATTTCCAAAGTCATCATCCAGCA...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGTGCTCTAAGTTCATATaGAACTGGTCCATTACAGGG +
Preference number: 5 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELCSKFI*NWSITG
Trigger: CCCTGTAATGGACCAGTTCAATATGAACTTAGAGCA...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACACCATACTGCTTGTATTaGGTATATCCCGAAATCTGT +
Preference number: 5 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTPYCLY*VYPEIC
Trigger: ACAGATTTCGGGATATACCAAATACAAGCAGTATGG...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATGGTTTTCCATACTGCTaGTATTTGGTATATCCCGAA +
Preference number: 5 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYGFPYC*YLVYPE
Trigger: TTCGGGATATACCAAATACAAGCAGTATGGAAAACC...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGTATTCACTGGGGTTTTaGAAAGTGTCCCATGGATTC +
Preference number: 5 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELYSLGF*KVSHGF
Trigger: GAATCCATGGGACACTTTCAAAAACCCCAGTGAATA...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAGTTCCAAAGCATCCTTaGCCTCTGTGTCTAAGACAT +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRVPKHP*PLCLRH
Trigger: ATGTCTTAGACACAGAGGCAAAGGATGCTTTGGAAC...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTGTTCCAAAGCATCCTTaGCCTCTGTGTCTAAGACAT +
Preference number: 5 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSVPKHP*PLCLRH
Trigger: ATGTCTTAGACACAGAGGCAAAGGATGCTTTGGAAC...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACAAGTGTCTGTACTCATTaGATATGCATCTTGCAAAGC +
Preference number: 5 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTSVCTH*ICILQS
Trigger: GCTTTGCAAGATGCATATCAAATGAGTACAGACACT...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATCCTTTCATTGGAAAGTaGATGTCTGTTAGAACAGAG +
Preference number: 5 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYPFIGK*MSVRTE
Trigger: CTCTGTTCTAACAGACATCAACTTTCCAATGAAAGG...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTGAAAGACTCGTTCGTTTaGGAGTCATCCCACAATACA +
Preference number: 5 (lower is better)
Translates to: ITLQIHSTGTYNTGWSELKDSFV*ESSHNT
Trigger: TGTATTGTGGGATGACTCCAAAACGAACGAGTCTTT...CAGTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS CCA 90 bp ATATGTTCCTGGGGTGCGAGATGTTGCTCTAAGTTCATATTGAACTaGTCCATTACAGGGGGATTCATATTGAATTCAGGGTTTACTTTG +
Preference number: 5 (lower is better)
Translates to: ICSWGARCCSKFILN*SITGGFILNSGFTL
Trigger: CAAAGTAAACCCTGAATTCAATATGAATCCCCCTGTAATGGACCAGTTCAATATGAACTTAGAGCAACATCTCGCACCCCAGGAACATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS-3UTR CAA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTACCAGTATGAGGATATaGGATGAGATGATAGACAGG +
Preference number: 5 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSTSMRI*DEMIDR
Trigger: CCTGTCTATCATCTCATCCAATATCCTCATACTGGT...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTAGAAACTACTCCACACTaGGCACATTTGAGCGTCAAA +
Preference number: 5 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLETTPH*AHLSVK
Trigger: TTTGACGCTCAAATGTGCCAAGTGTGGAGTAGTTTC...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTTTAGCCCTTCAGGGTTaGTTCCCTTTTCTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSLALQG*FPFLLH
Trigger: ATGAAGAAGAAAAGGGAACAAACCCTGAAGGGCTAA...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCATTTCCAGGCAATGTaGAATAGCTTAGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYHFQAM*NSLALQ
Trigger: CTGAAGGGCTAAGCTATTCAACATTGCCTGGAAATG...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACATGCTTTCTTCTTTCATaGAAGGCTGGTTATTTACAG +
Preference number: 5 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTCFLLS*KAGYLQ
Trigger: CTGTAAATAACCAGCCTTCAATGAAAGAAGAAAGCA...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACACAGGGGGATTCATATaGAATTCAGGGTTTACTTTG +
Preference number: 5 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNTGGFI*NSGFTL
Trigger: CAAAGTAAACCCTGAATTCAATATGAATCCCCCTGT...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTTATTCACTGGGGTTTTaGAAAGTGTCCCATGGATTC +
Preference number: 5 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSYSLGF*KVSHGF
Trigger: GAATCCATGGGACACTTTCAAAAACCCCAGTGAATA...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATTTCATCCTATGTCATTaGGCCTCTGTAAGTTGTTAT +
Preference number: 5 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYFILCH*ASVSCY
Trigger: ATAACAACTTACAGAGGCCAAATGACATAGGATGAA...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp GAGAAGTTACCATATGAAAACACCACTGACGTTTGGCACATGAAGGTCCTGACAAAAACGAAAGCATTCTaGGAATTGCAGAGTTGCATT +
Preference number: 5 (lower is better)
Translates to: EKLPYENTTDVWHMKVLTKTKAF*ELQSCI
Trigger: AATGCAACTCTGCAATTCCAAGAATGCTTTCGTTTT...TGTCAGGACCTTCATGTGCCAAACGTCAGTGGTGTTTTCATATGGTAACTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTATGGCTTGGGCTGACCTaGTTCAATACCAAAAACTCA +
Preference number: 5 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLWLGLT*FNTKNS
Trigger: TGAGTTTTTGGTATTGAACAAGGTCAGCCCAAGCCA...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACTGTTATTGCAAACCCTaGATTCTCTTAATGGGCCGC +
Preference number: 5 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYCYCKP*ILLMGR
Trigger: GCGGCCCATTAAGAGAATCAAGGGTTTGCAATAACA...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCCTTGTTCTTGTTCTTaGGCCTCGACCACATGTAAA +
Preference number: 5 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYPCSCS*ASTTCK
Trigger: TTTACATGTGGTCGAGGCCAAAGAACAAGAACAAGG...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGACCCTGGATAAATCTGTaGTGCATCTTCCCATTTTTC +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRPWINL*CIFPFF
Trigger: GAAAAATGGGAAGATGCACAACAGATTTATCCAGGG...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AACTGTACACCTGGTCATCTCTCCACTAGCCTGACTAGTGAGAAGTTACCATATATTAGATCTAAGTTTTaGTATAGGACTGCGCCAAGA +
Preference number: 5 (lower is better)
Translates to: NCTPGHLSTSLTSEKLPYIRSKF*YRTAPR
Trigger: TCTTGGCGCAGTCCTATACAAAAACTTAGATCTAAT...ATATGGTAACTTCTCACTAGTCAGGCTAGTGGAGAGATGACCAGGTGTACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS TCA 90 bp TTCACTTACAGAATACGATCCATAAATGACTCCCTTCACCAAAGTTaGACACCAGAAGTCTTGGGCAGCATTAAATCCAAACATAACCAG +
Preference number: 5 (lower is better)
Translates to: FTYRIRSINDSLHQS*TPEVLGSIKSKHNQ
Trigger: CTGGTTATGTTTGGATTTAATGCTGCCCAAGACTTCTGGTGTTCAACTTTGGTGAAGGGAGTCATTTATGGATCGTATTCTGTAAGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 90 bp TTTTTCAAACATGGATTGCTAAGCTCATTCATACTCATGGGCATGTaGAAACCTGTGGGTTGCTGGATGATGACTTTGGAAATGACATTT +
Preference number: 5 (lower is better)
Translates to: FFKHGLLSSFILMGM*KPVGCWMMTLEMTF
Trigger: AAATGTCATTTCCAAAGTCATCATCCAGCAACCCACAGGTTTGCACATGCCCATGAGTATGAATGAGCTTAGCAATCCATGTTTGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS-3UTR CAA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACACCAGTATGAGGATATaGGATGAGATGATAGACAGG +
Preference number: 5 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYTSMRI*DEMIDR
Trigger: CCTGTCTATCATCTCATCCAATATCCTCATACTGGT...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACAAAATGCAGTGGTGGTaGTGCAGATACTCTTATTAT +
Preference number: 5 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNKMQWW*CRYSYY
Trigger: ATAATAAGAGTATCTGCACAACCACCACTGCATTTT...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTAAAGTCTGTCATGATTaGAGCATGCCCATTAGGAAA +
Preference number: 5 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSKVCHD*SMPIRK
Trigger: TTTCCTAATGGGCATGCTCAAATCATGACAGACTTT...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTATTAGCCCTTCAGGGTTaGTTCCCTTTTCTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLLALQG*FPFLLH
Trigger: ATGAAGAAGAAAAGGGAACAAACCCTGAAGGGCTAA...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTTTCCATCATTCTTTCTaGAGGATGGACTATGTCCAT +
Preference number: 5 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSFHHSF*RMDYVH
Trigger: ATGGACATAGTCCATCCTCAAGAAAGAATGATGGAA...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTATGCTCTAAGTTCATATaGAACTGGTCCATTACAGGG +
Preference number: 5 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLCSKFI*NWSITG
Trigger: CCCTGTAATGGACCAGTTCAATATGAACTTAGAGCA...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACAACTCATTGATATCGTaGATCCAGTTTCACTTCTTG +
Preference number: 5 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNNSLIS*IQFHFL
Trigger: CAAGAAGTGAAACTGGATCAACGATATCAATGAGTT...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTCCATACTGCTTGTATTaGGTATATCCCGAAATCTGT +
Preference number: 5 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSPYCLY*VYPEIC
Trigger: ACAGATTTCGGGATATACCAAATACAAGCAGTATGG...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAACTTTTTAAACTTCTGTTaGAAAGTCACCCTCTTGCAC +
Preference number: 5 (lower is better)
Translates to: RLPYKSIPRVLTTQDGQNFLNFC*KVTLLH
Trigger: GTGCAAGAGGGTGACTTTCAAACAGAAGTTTAAAAA...GTTCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTAAATGCTATATTTGGTaGGATCTGGATTTTCCAGCG +
Preference number: 5 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSKCYIW*DLDFPA
Trigger: CGCTGGAAAATCCAGATCCAACCAAATATAGCATTT...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACACCAGATTCACCAGTTaGTGCCATAAATTTAGCAGC +
Preference number: 5 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYTRFTS*CHKFSS
Trigger: GCTGCTAAATTTATGGCACAAACTGGTGAATCTGGT...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp CAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCTTAGTAAGGTTGCTAACTATTaGAAAGAAGTTCTGGACACC +
Preference number: 5 (lower is better)
Translates to: QASQVLSVSAIKFCLYLSKVANY*KEVLDT
Trigger: GGTGTCCAGAACTTCTTTCAAATAGTTAGCAACCTT...ACTAAGGTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS TCA 90 bp ACTATAACAAAGCCTTGCAATGAATCAAACACAGCAAAAAGTATTTaGAACAATATGGAGCGTTTATCTGTCATGGCCAGAACCGCAGAC +
Preference number: 5 (lower is better)
Translates to: TITKPCNESNTAKSI*NNMERLSVMARTAD
Trigger: GTCTGCGGTTCTGGCCATGACAGATAAACGCTCCATATTGTTTCAAATACTTTTTGCTGTGTTTGATTCATTGCAAGGCTTTGTTATAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACAGGATGGTCAGAAAAATGCAGTGGTGGTaGTGCAGATACTCTTATTAT +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHRMVRKMQWW*CRYSYY
Trigger: ATAATAAGAGTATCTGCACAACCACCACTGCATTTT...TCTGACCATCCTGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTAAAAGTCTGTCATGATTaGAGCATGCCCATTAGGAAA +
Preference number: 5 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLKVCHD*SMPIRK
Trigger: TTTCCTAATGGGCATGCTCAAATCATGACAGACTTT...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTATTCCATCATTCTTTCTaGAGGATGGACTATGTCCAT +
Preference number: 5 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLFHHSF*RMDYVH
Trigger: ATGGACATAGTCCATCCTCAAGAAAGAATGATGGAA...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACACAGGGGGATTCATATaGAATTCAGGGTTTACTTTG +
Preference number: 5 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYTGGFI*NSGFTL
Trigger: CAAAGTAAACCCTGAATTCAATATGAATCCCCCTGT...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACGGTTTTCCATACTGCTaGTATTTGGTATATCCCGAA +
Preference number: 5 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYGFPYC*YLVYPE
Trigger: TTCGGGATATACCAAATACAAGCAGTATGGAAAACC...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACCCTGCATTAACTCTATaGACCCTGGATAAATCTGTT +
Preference number: 5 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYPALTL*TLDKSV
Trigger: AACAGATTTATCCAGGGTCAATAGAGTTAATGCAGG...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370598.6
CDS-3UTR CAA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTATGCTTTCTTCTTTCATaGAAGGCTGGTTATTTACAG +
Preference number: 5 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLCFLLS*KAGYLQ
Trigger: CTGTAAATAACCAGCCTTCAATGAAAGAAGAAAGCA...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp AAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTACAACTCATTGATATCGTaGATCCAGTTTCACTTCTTG +
Preference number: 5 (lower is better)
Translates to: KCQASQVLSVSAIKFCLYNSLIS*IQFHFL
Trigger: CAAGAAGTGAAACTGGATCAACGATATCAATGAGTT...GTAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS-3UTR CAA 90 bp GAAATGTCAGGCTTCCCAAGTCTTAAGTGTCAGTGCAATAAAGTTTTGTCTCTATTTTTAAACTTCTGTTaGAAAGTCACCCTCTTGCAC +
Preference number: 5 (lower is better)
Translates to: EMSGFPSLKCQCNKVLSLFLNFC*KVTLLH
Trigger: GTGCAAGAGGGTGACTTTCAAACAGAAGTTTAAAAA...TAGAGACAAAACTTTATTGCACTGACACTTAAGACTTGGGAAGCCTGACATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000238918.12
ENST00000370598.6
CDS TCA 72 bp CCATGGGCAGCTGCAGTGCACTGCCGGCTTCTCTGCTaGGTCCCATTCGAGCACGTTACTGAGCACTGGCTC +
Preference number: 6 (lower is better)
Translates to: PWAAAVHCRLLC*VPFEHVTEHWL
Trigger: GAGCCAGTGCTCAGTAACGTGCTCGAATGGGACTCAGCAGAGAAGCCGGCAGTGCACTGCAGCTGCCCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 72 bp GACCGGCGGCGGCGGCGGCTGCTATGGCAGATTTGTTaGGGCGGTGGGTTTATTACAGGAGTATTCGTGGTC +
Preference number: 6 (lower is better)
Translates to: DRRRRRLLWQIC*GGGFITGVFVV
Trigger: GACCACGAATACTCCTGTAATAAACCCACCGCCCCAACAAATCTGCCATAGCAGCCGCCGCCGCCGCCGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370598.6
ENST00000684661.1
CDS TCA 72 bp CTAAGACACCAGCACAGGCACGCGTCCCAGCAACAGTaGCGGAGAGACTCCCCTTCGGTCCCAATCACCGTT +
Preference number: 6 (lower is better)
Translates to: LRHQHRHASQQQ*RRDSPSVPITV
Trigger: AACGGTGATTGGGACCGAAGGGGAGTCTCTCCGTCACTGTTGCTGGGACGCGTGCCTGTGCTGGTGTCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370598.6
ENST00000684661.1
CDS CAA 72 bp CTTGGCCTCCCTGGTAAGATTGCAGACTTGGGTGGTTaGCAGCTCCTGGGTCAGGCAGCCCTCTGTCTGCTC +
Preference number: 6 (lower is better)
Translates to: LGLPGKIADLGG*QLLGQAALCLL
Trigger: GAGCAGACAGAGGGCTGCCTGACCCAGGAGCTGCAAACCACCCAAGTCTGCAATCTTACCAGGGAGGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS TCA 72 bp CCGGCTTCTCTGCTGAGTCCCATTCGAGCACGTTACTaGGCACTGGCTCCACGAACTCCACTCTTGCCACTG +
Preference number: 6 (lower is better)
Translates to: PASLLSPIRARY*ALAPRTPLLPL
Trigger: CAGTGGCAAGAGTGGAGTTCGTGGAGCCAGTGCTCAGTAACGTGCTCGAATGGGACTCAGCAGAGAAGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 72 bp CACTGTTCTTCCACTCCGAAAGCTCAGGGAGGCTCTTaGTCTAAGACACCAGCACAGGCACGCGTCCCAGCA +
Preference number: 6 (lower is better)
Translates to: HCSSTPKAQGGS*SKTPAQARVPA
Trigger: TGCTGGGACGCGTGCCTGTGCTGGTGTCTTAGAGCAAGAGCCTCCCTGAGCTTTCGGAGTGGAAGAACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370598.6
ENST00000684661.1
CDS GCA 72 bp TTGGCCTCCCTGGTAAGATTGCAGACTTGGGTGGTTTaGAGCTCCTGGGTCAGGCAGCCCTCTGTCTGCTCA +
Preference number: 6 (lower is better)
Translates to: LASLVRLQTWVV*SSWVRQPSVCS
Trigger: TGAGCAGACAGAGGGCTGCCTGACCCAGGAGCTGCAAACCACCCAAGTCTGCAATCTTACCAGGGAGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 72 bp GGTTATAGCACTCTCTGCTTTCTGCCCATGGCCCTCTaGATTCGGAGCCTCCATGGGCAGCTGCAGTGCACT +
Preference number: 6 (lower is better)
Translates to: GYSTLCFLPMAL*IRSLHGQLQCT
Trigger: AGTGCACTGCAGCTGCCCATGGAGGCTCCGAATGCAGAGGGCCATGGGCAGAAAGCAGAGAGTGCTATAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 72 bp GCGGCGGCGGCTGCTATGGCAGATTTGTTGGGGCGGTaGGTTTATTACAGGAGTATTCGTGGTCGGATCGGA +
Preference number: 6 (lower is better)
Translates to: AAAAAMADLLGR*VYYRSIRGRIG
Trigger: TCCGATCCGACCACGAATACTCCTGTAATAAACCCACCGCCCCAACAAATCTGCCATAGCAGCCGCCGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370598.6
ENST00000684661.1
CDS TCA 72 bp CTGCCTCATGGCCTGAGTGCCGGATCCCCAAGGTCGTaGAGAGCAGGAACTGATTCACTTGAGTTTGGGGCA +
Preference number: 6 (lower is better)
Translates to: LPHGLSAGSPRS*RAGTDSLEFGA
Trigger: TGCCCCAAACTCAAGTGAATCAGTTCCTGCTCTTCACGACCTTGGGGATCCGGCACTCAGGCCATGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684661.1
CDS GCA 72 bp TTCGCCCGTTCCTTCACATTGCTGCCCTGTTATCACTaGACCCTGACAGGTCCTTATTCGCCTTTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: FARSFTLLPCYH*TLTGPYSPFPA
Trigger: GGCTGGGAAAGGCGAATAAGGACCTGTCAGGGTGCAGTGATAACAGGGCAGCAATGTGAAGGAACGGGCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS TCA 72 bp GTTCCTTCACATTGCTGCCCTGTTATCACTGCACCCTaGCAGGTCCTTATTCGCCTTTCCCAGCCGCCATCA +
Preference number: 6 (lower is better)
Translates to: VPSHCCPVITAP*QVLIRLSQPPS
Trigger: TGATGGCGGCTGGGAAAGGCGAATAAGGACCTGTCAGGGTGCAGTGATAACAGGGCAGCAATGTGAAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 72 bp GTCCTTCACACGGCCTTCCTCCATACTGAGGAGGTGTaGATGACCTTGTTCTTGTTCTTTGGCCTCGACCAC +
Preference number: 6 (lower is better)
Translates to: VLHTAFLHTEEV*MTLFLFFGLDH
Trigger: GTGGTCGAGGCCAAAGAACAAGAACAAGGTCATGCACACCTCCTCAGTATGGAGGAAGGCCGTGTGAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 72 bp GACCATTGGCTGTACATTCAGGGTTATAGCACTCTCTaGTTTCTGCCCATGGCCCTCTGCATTCGGAGCCTC +
Preference number: 6 (lower is better)
Translates to: DHWLYIQGYSTL*FLPMALCIRSL
Trigger: GAGGCTCCGAATGCAGAGGGCCATGGGCAGAAAGCAGAGAGTGCTATAACCCTGAATGTACAGCCAATGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 72 bp AGGAGCTCCAAAGAGACGCCATGGCGTTACTGGCGGTaGTGGCTGACAAAGCTGTTGTTGAAACTACTCCAC +
Preference number: 6 (lower is better)
Translates to: RSSKETPWRYWR*WLTKLLLKLLH
Trigger: GTGGAGTAGTTTCAACAACAGCTTTGTCAGCCACCACCGCCAGTAACGCCATGGCGTCTCTTTGGAGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CAA 90 bp CTTCCTACTCCACACTTCACTCAGTCCAGCTCGCCTCTGACGTCCTaGACATTTCTTTCCCTCAACTGCTTCTTTGCCCTGGGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: LPTPHFTQSSSPLTS*TFLSLNCFFALGQK
Trigger: CTTCTGCCCCAGGGCAAAGAAGCAGTTGAGGGAAAGAAATGTCAAGGACGTCAGAGGCGAGCTGGACTGAGTGAAGTGTGGAGTAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238918.12
CDS TCA 72 bp CGTCTGCTAGTGGTGCCTGTGGCATTCAGGGGACATTaGTTGAATGCCAAGTCGCCTGCTGGAGTTCTTTTC +
Preference number: 6 (lower is better)
Translates to: RLLVVPVAFRGH*LNAKSPAGVLF
Trigger: GAAAAGAACTCCAGCAGGCGACTTGGCATTCAATCAATGTCCCCTGAATGCCACAGGCACCACTAGCAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 72 bp AGCTCCAAAGAGACGCCATGGCGTTACTGGCGGTGGTaGCTGACAAAGCTGTTGTTGAAACTACTCCACACT +
Preference number: 6 (lower is better)
Translates to: SSKETPWRYWRW*LTKLLLKLLHT
Trigger: AGTGTGGAGTAGTTTCAACAACAGCTTTGTCAGCCACCACCGCCAGTAACGCCATGGCGTCTCTTTGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CAA 72 bp CCACACTTCACTCAGTCCAGCTCGCCTCTGACGTCCTaGACATTTCTTTCCCTCAACTGCTTCTTTGCCCTG +
Preference number: 6 (lower is better)
Translates to: PHFTQSSSPLTS*TFLSLNCFFAL
Trigger: CAGGGCAAAGAAGCAGTTGAGGGAAAGAAATGTCAAGGACGTCAGAGGCGAGCTGGACTGAGTGAAGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000238918.12
CDS CAA 72 bp CGTGTACTGGACAGAGGGCAGTGTTATTGCAAACCCTaGATTCTCTTAATGGGCCGCTGCAGTGTGTCCCGT +
Preference number: 6 (lower is better)
Translates to: RVLDRGQCYCKP*ILLMGRCSVSR
Trigger: ACGGGACACACTGCAGCGGCCCATTAAGAGAATCAAGGGTTTGCAATAACACTGCCCTCTGTCCAGTACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CAA 72 bp GCGTCTGCTAGTGGTGCCTGTGGCATTCAGGGGACATaGATTGAATGCCAAGTCGCCTGCTGGAGTTCTTTT +
Preference number: 6 (lower is better)
Translates to: ASASGACGIQGT*IECQVACWSSF
Trigger: AAAAGAACTCCAGCAGGCGACTTGGCATTCAATCAATGTCCCCTGAATGCCACAGGCACCACTAGCAGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CAA 72 bp GATCCCCAAGGTCGTGAAGAGCAGGAACTGATTCACTaGAGTTTGGGGCAGACCACAGAAGACCACACAGCT +
Preference number: 6 (lower is better)
Translates to: DPQGREEQELIH*SLGQTTEDHTA
Trigger: AGCTGTGTGGTCTTCTGTGGTCTGCCCCAAACTCAAGTGAATCAGTTCCTGCTCTTCACGACCTTGGGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684661.1
CDS CAA 90 bp TCGCTGCTCATTGCATCTTCTCACTTCTTCGCCCGTTCCTTCACATaGCTGCCCTGTTATCACTGCACCCTGACAGGTCCTTATTCGCCT +
Preference number: 6 (lower is better)
Translates to: SLLIASSHFFARSFT*LPCYHCTLTGPYSP
Trigger: AGGCGAATAAGGACCTGTCAGGGTGCAGTGATAACAGGGCAGCAATGTGAAGGAACGGGCGAAGAAGTGAGAAGATGCAATGAGCAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CAA 90 bp CCCATACTCCGTGTACTGGACAGAGGGCAGTGTTATTGCAAACCCTaGATTCTCTTAATGGGCCGCTGCAGTGTGTCCCGTAAGGTGATA +
Preference number: 6 (lower is better)
Translates to: PILRVLDRGQCYCKP*ILLMGRCSVSRKVI
Trigger: TATCACCTTACGGGACACACTGCAGCGGCCCATTAAGAGAATCAAGGGTTTGCAATAACACTGCCCTCTGTCCAGTACACGGAGTATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS TCA 72 bp TTCACACGGCCTTCCTCCATACTGAGGAGGTGTGCATaGCCTTGTTCTTGTTCTTTGGCCTCGACCACATGT +
Preference number: 6 (lower is better)
Translates to: FTRPSSILRRCA*PCSCSLASTTC
Trigger: ACATGTGGTCGAGGCCAAAGAACAAGAACAAGGTCATGCACACCTCCTCAGTATGGAGGAAGGCCGTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 72 bp GTGGTTTGCAGCTCCTGGGTCAGGCAGCCCTCTGTCTaGTCATTCAGGGGTAACACCACGTTATTTAACAAA +
Preference number: 6 (lower is better)
Translates to: VVCSSWVRQPSV*SFRGNTTLFNK
Trigger: TTTGTTAAATAACGTGGTGTTACCCCTGAATGAGCAGACAGAGGGCTGCCTGACCCAGGAGCTGCAAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 72 bp CCCATACTCCGTGTACTGGACAGAGGGCAGTGTTATTaGAAACCCTTGATTCTCTTAATGGGCCGCTGCAGT +
Preference number: 6 (lower is better)
Translates to: PILRVLDRGQCY*KPLILLMGRCS
Trigger: ACTGCAGCGGCCCATTAAGAGAATCAAGGGTTTGCAATAACACTGCCCTCTGTCCAGTACACGGAGTATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 72 bp GTATGGGATGCATCGGTAAGCACAGTTTTACATCCCTaGGTGGACCACGTTCCCAAAGACTCGTTCCTAAGC +
Preference number: 6 (lower is better)
Translates to: VWDASVSTVLHP*VDHVPKDSFLS
Trigger: GCTTAGGAACGAGTCTTTGGGAACGTGGTCCACCCAGGGATGTAAAACTGTGCTTACCGATGCATCCCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000238918.12
CDS CCA 72 bp TCCTTATTCGCCTTTCCCAGCCGCCATCACAGGACTTaGAACAACCACTCCAATGACCCCACTGATTCCATT +
Preference number: 6 (lower is better)
Translates to: SLFAFPSRHHRT*NNHSNDPTDSI
Trigger: AATGGAATCAGTGGGGTCATTGGAGTGGTTGTTCCAAGTCCTGTGATGGCGGCTGGGAAAGGCGAATAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 72 bp GTATGGGATGCATCGGTAAGCACAGTTTTACATCCCTaGGTGGACCACGTTCCCAAAGACTCGTTCCTGCAA +
Preference number: 6 (lower is better)
Translates to: VWDASVSTVLHP*VDHVPKDSFLQ
Trigger: TTGCAGGAACGAGTCTTTGGGAACGTGGTCCACCCAGGGATGTAAAACTGTGCTTACCGATGCATCCCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604969.1
CDS CAA 72 bp TCCCATACTCCGTGTACTGGACAGAGGGCAGTGTTATaGCAAACCCTTGATTCTCTTAATGGGCCGCTGCAG +
Preference number: 6 (lower is better)
Translates to: SHTPCTGQRAVL*QTLDSLNGPLQ
Trigger: CTGCAGCGGCCCATTAAGAGAATCAAGGGTTTGCAATAACACTGCCCTCTGTCCAGTACACGGAGTATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CAA 72 bp ATTGCATCTTCTCACTTCTTCGCCCGTTCCTTCACATaGCTGCCCTGTTATCACTGCACCCTGACAGGTCCT +
Preference number: 6 (lower is better)
Translates to: IASSHFFARSFT*LPCYHCTLTGP
Trigger: AGGACCTGTCAGGGTGCAGTGATAACAGGGCAGCAATGTGAAGGAACGGGCGAAGAAGTGAGAAGATGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS TCA 72 bp TGTGTTTCAGGTCCTTCACACGGCCTTCCTCCATACTaGGGAGGTGTGCATGACCTTGTTCTTGTTCTTTGG +
Preference number: 6 (lower is better)
Translates to: CVSGPSHGLPPY*GGVHDLVLVLW
Trigger: CCAAAGAACAAGAACAAGGTCATGCACACCTCCTCAGTATGGAGGAAGGCCGTGTGAAGGACCTGAAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS TCA 72 bp AAGCTGTTGTTGAAACTACTCCACACTTGGCACATTTaGGCGTCAAACCGCTATGAGGCTCACTCATCCGGC +
Preference number: 6 (lower is better)
Translates to: KLLLKLLHTWHI*ASNRYEAHSSG
Trigger: GCCGGATGAGTGAGCCTCATAGCGGTTTGACGCTCAAATGTGCCAAGTGTGGAGTAGTTTCAACAACAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684661.1
CDS GCA 72 bp CACGTTACTGAGCACTGGCTCCACGAACTCCACTCTTaGCACTGTCCATCAACTGGGCAAAGAGCAATATTA +
Preference number: 6 (lower is better)
Translates to: HVTEHWLHELHS*HCPSTGQRAIL
Trigger: TAATATTGCTCTTTGCCCAGTTGATGGACAGTGGCAAGAGTGGAGTTCGTGGAGCCAGTGCTCAGTAACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 72 bp GTATGGGATGCATCGGTAAGCACAGTTTTACATCCCTaGGTGGACCACGTTCCCAAAGACTCGTTCGTTTTG +
Preference number: 6 (lower is better)
Translates to: VWDASVSTVLHP*VDHVPKDSFVL
Trigger: CAAAACGAACGAGTCTTTGGGAACGTGGTCCACCCAGGGATGTAAAACTGTGCTTACCGATGCATCCCATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 72 bp GTATGGGATGCATCGGTAAGCACAGTTTTACATCCCTaGGTGGACCACGTTCCCAAAGACTCGTTCTTGTTG +
Preference number: 6 (lower is better)
Translates to: VWDASVSTVLHP*VDHVPKDSFLL
Trigger: CAACAAGAACGAGTCTTTGGGAACGTGGTCCACCCAGGGATGTAAAACTGTGCTTACCGATGCATCCCATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603207.1
CDS GCA 72 bp TTCTTCACAGCTGTGCGAGGTTCAAAGGGCAAATTCTaGATATGTTCCTGGGGTGCGAGATGTTGCTCTAAG +
Preference number: 6 (lower is better)
Translates to: FFTAVRGSKGKF*ICSWGARCCSK
Trigger: CTTAGAGCAACATCTCGCACCCCAGGAACATATGCAGAATTTGCCCTTTGAACCTCGCACAGCTGTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 72 bp GGCATTCAGGGGACATTGATTGAATGCCAAGTCGCCTaGTGGAGTTCTTTTCCACACCATCGACATCAGATA +
Preference number: 6 (lower is better)
Translates to: GIQGTLIECQVA*WSSFPHHRHQI
Trigger: TATCTGATGTCGATGGTGTGGAAAAGAACTCCAGCAGGCGACTTGGCATTCAATCAATGTCCCCTGAATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 72 bp TTTGTTGGGGCGGTGGGTTTATTACAGGAGTATTCGTaGTCGGATCGGAAGGCTCAAGCTTATGCTTTTTCC +
Preference number: 6 (lower is better)
Translates to: FVGAVGLLQEYS*SDRKAQAYAFS
Trigger: GGAAAAAGCATAAGCTTGAGCCTTCCGATCCGACCACGAATACTCCTGTAATAAACCCACCGCCCCAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370598.6
ENST00000684661.1
CDS TCA 72 bp AAGCTGTTGTTGAAACTACTCCACACTTGGCACATTTaGGCGTCAAACCGCTATGAGGCTCACTCATCTGAC +
Preference number: 6 (lower is better)
Translates to: KLLLKLLHTWHI*ASNRYEAHSSD
Trigger: GTCAGATGAGTGAGCCTCATAGCGGTTTGACGCTCAAATGTGCCAAGTGTGGAGTAGTTTCAACAACAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
CDS TCA 72 bp CCATCAACTGGGCAAAGAGCAATATTACAAGGCTTATaGTGTGTTTCAGGTCCTTCACACGGCCTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PSTGQRAILQGL*CVSGPSHGLPP
Trigger: TGGAGGAAGGCCGTGTGAAGGACCTGAAACACATCATAAGCCTTGTAATATTGCTCTTTGCCCAGTTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 72 bp TGTTATTGCAAACCCTTGATTCTCTTAATGGGCCGCTaGAGTGTGTCCCGTAAGGTGATACACAAGTTCTGG +
Preference number: 6 (lower is better)
Translates to: CYCKPLILLMGR*SVSRKVIHKFW
Trigger: CCAGAACTTGTGTATCACCTTACGGGACACACTGCAGCGGCCCATTAAGAGAATCAAGGGTTTGCAATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 72 bp GCGAAGGTAGAGAGACGATCACATAAGCATTTCGTATaGGATGCATCGGTAAGCACAGTTTTACATCCCTGG +
Preference number: 6 (lower is better)
Translates to: AKVERRSHKHFV*DASVSTVLHPW
Trigger: CCAGGGATGTAAAACTGTGCTTACCGATGCATCCCATACGAAATGCTTATGTGATCGTCTCTCTACCTTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000603207.1
ENST00000604969.1
ENST00000684661.1
CDS CAA 72 bp AATGCTGCAAGTGTCTGTACTCATTTGATATGCATCTaGCAAAGCTCGGCTGTTCCCAGAAGGCCACTCCAT +
Preference number: 6 (lower is better)
Translates to: NAASVCTHLICI*QSSAVPRRPLH
Trigger: ATGGAGTGGCCTTCTGGGAACAGCCGAGCTTTGCAAGATGCATATCAAATGAGTACAGACACTTGCAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CAA 72 bp CAGTCAACCATTCCCTTCCGTCCTTTCATTGGAAAGTaGATGTCTGTTAGAACAGAGGCTGCAGGAAGCTTC +
Preference number: 6 (lower is better)
Translates to: QSTIPFRPFIGK*MSVRTEAAGSF
Trigger: GAAGCTTCCTGCAGCCTCTGTTCTAACAGACATCAACTTTCCAATGAAAGGACGGAAGGGAATGGTTGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS TCA 72 bp AGCAGTAGTGATCAGTGCCATATCCTTTTGTTCTGGTaGAGCCTACTGATGTGGCCACTACTAATGCTGGTA +
Preference number: 6 (lower is better)
Translates to: SSSDQCHILLFW*SLLMWPLLMLV
Trigger: TACCAGCATTAGTAGTGGCCACATCAGTAGGCTTCACCAGAACAAAAGGATATGGCACTGATCACTACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS TCA 72 bp CGCTATGAGGCTCACTCATCTGACCGGCTCTGTGTTTaGGCTTTTTATCTAGGATTCCATCTCTGGAAACAA +
Preference number: 6 (lower is better)
Translates to: RYEAHSSDRLCV*AFYLGFHLWKQ
Trigger: TTGTTTCCAGAGATGGAATCCTAGATAAAAAGCTCAAACACAGAGCCGGTCAGATGAGTGAGCCTCATAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
CDS TCA 72 bp TTGATAGTCCTGCATTATCATCCAACTCAGAGGCCATaGAATTCTTCACAGCTGTGCGAGGTTCAAAGGGCA +
Preference number: 6 (lower is better)
Translates to: LIVLHYHPTQRP*NSSQLCEVQRA
Trigger: TGCCCTTTGAACCTCGCACAGCTGTGAAGAATTTCATGGCCTCTGAGTTGGATGATAATGCAGGACTATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 72 bp TTGAGCATGCCCATTAGGAAACGAACTCGAAGAATCTaGATTGATGGGATCCTGACAGTTTCTCAATCGGCA +
Preference number: 6 (lower is better)
Translates to: LSMPIRKRTRRI*IDGILTVSQSA
Trigger: TGCCGATTGAGAAACTGTCAGGATCCCATCAATGCAGATTCTTCGAGTTCGTTTCCTAATGGGCATGCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 72 bp CATGGATTGCTAAGCTCATTCATACTCATGGGCATGTaGAAACCTGTGGGTTGCTGGATGATGACTTTGGAA +
Preference number: 6 (lower is better)
Translates to: HGLLSSFILMGM*KPVGCWMMTLE
Trigger: TTCCAAAGTCATCATCCAGCAACCCACAGGTTTGCACATGCCCATGAGTATGAATGAGCTTAGCAATCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS GCA 72 bp GGCAAATTCTGCATATGTTCCTGGGGTGCGAGATGTTaGTCTAAGTTCATATTGAACTGGTCCATTACAGGG +
Preference number: 6 (lower is better)
Translates to: GKFCICSWGARC*SKFILNWSITG
Trigger: CCCTGTAATGGACCAGTTCAATATGAACTTAGAGCAACATCTCGCACCCCAGGAACATATGCAGAATTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CAA 72 bp TGTGGCGTTAACACAAGAGAAGACACTAGGGACTGTTaGTGCATTTGGCTCAACTCAGGCTTCCACTTTCAA +
Preference number: 6 (lower is better)
Translates to: CGVNTREDTRDC*CIWLNSGFHFQ
Trigger: TTGAAAGTGGAAGCCTGAGTTGAGCCAAATGCACAAACAGTCCCTAGTGTCTTCTCTTGTGTTAACGCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684661.1
CDS GCA 72 bp CGTGTCCTAATTTTTCCAGTTACAGCCATATATGATTaGCACGCCTCAGTCAAAACCCAACAGAATGAAGCC +
Preference number: 6 (lower is better)
Translates to: RVLIFPVTAIYD*HASVKTQQNEA
Trigger: GGCTTCATTCTGTTGGGTTTTGACTGAGGCGTGGCAATCATATATGGCTGTAACTGGAAAAATTAGGACACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 72 bp TGGGGTGCGAGATGTTGCTCTAAGTTCATATTGAACTaGTCCATTACAGGGGGATTCATATTGAATTCAGGG +
Preference number: 6 (lower is better)
Translates to: WGARCCSKFILN*SITGGFILNSG
Trigger: CCCTGAATTCAATATGAATCCCCCTGTAATGGACCAGTTCAATATGAACTTAGAGCAACATCTCGCACCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS TCA 72 bp AGTGAAAATGCTTTTTGGAATTACTACCCTATCTTCTaGGTTTCTTGCCCAGTCAACCATTCCCTTCCGTCC +
Preference number: 6 (lower is better)
Translates to: SENAFWNYYPIF*VSCPVNHSLPS
Trigger: GGACGGAAGGGAATGGTTGACTGGGCAAGAAACTCAGAAGATAGGGTAGTAATTCCAAAAAGCATTTTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 72 bp CTCTCCAACCAAGTACATAATACATGGCAACCAAACTaGCTTGGGCTGACCTTGTTCAATACCAAAAACTCA +
Preference number: 6 (lower is better)
Translates to: LSNQVHNTWQPN*LGLTLFNTKNS
Trigger: TGAGTTTTTGGTATTGAACAAGGTCAGCCCAAGCCAGTTTGGTTGCCATGTATTATGTACTTGGTTGGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 72 bp GATTTTAAGCAGCTCTCCAACCAAGTACATAATACATaGCAACCAAACTGGCTTGGGCTGACCTTGTTCAAT +
Preference number: 6 (lower is better)
Translates to: DFKQLSNQVHNT*QPNWLGLTLFN
Trigger: ATTGAACAAGGTCAGCCCAAGCCAGTTTGGTTGCCATGTATTATGTACTTGGTTGGAGAGCTGCTTAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CAA 72 bp TGTTCCTGGGGTGCGAGATGTTGCTCTAAGTTCATATaGAACTGGTCCATTACAGGGGGATTCATATTGAAT +
Preference number: 6 (lower is better)
Translates to: CSWGARCCSKFI*NWSITGGFILN
Trigger: ATTCAATATGAATCCCCCTGTAATGGACCAGTTCAATATGAACTTAGAGCAACATCTCGCACCCCAGGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CAA 72 bp TGCTTTTTGGAATTACTACCCTATCTTCTGAGTTTCTaGCCCAGTCAACCATTCCCTTCCGTCCTTTCATTG +
Preference number: 6 (lower is better)
Translates to: CFLELLPYLLSF*PSQPFPSVLSL
Trigger: CAATGAAAGGACGGAAGGGAATGGTTGACTGGGCAAGAAACTCAGAAGATAGGGTAGTAATTCCAAAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CAA 90 bp TTCTGCATATGTTCCTGGGGTGCGAGATGTTGCTCTAAGTTCATATaGAACTGGTCCATTACAGGGGGATTCATATTGAATTCAGGGTTT +
Preference number: 6 (lower is better)
Translates to: FCICSWGARCCSKFI*NWSITGGFILNSGF
Trigger: AAACCCTGAATTCAATATGAATCCCCCTGTAATGGACCAGTTCAATATGAACTTAGAGCAACATCTCGCACCCCAGGAACATATGCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CAA 90 bp AGAACTTCTGGGCATCACAATATAGTCACTTTCCATCATTCTTTCTaGAGGATGGACTATGTCCATGTCAGCCCCTCTCAAATTATCATC +
Preference number: 6 (lower is better)
Translates to: RTSGHHNIVTFHHSF*RMDYVHVSPSQIII
Trigger: GATGATAATTTGAGAGGGGCTGACATGGACATAGTCCATCCTCAAGAAAGAATGATGGAAAGTGACTATATTGTGATGCCCAGAAGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS TCA 72 bp AGAATACGATCCATAAATGACTCCCTTCACCAAAGTTaGACACCAGAAGTCTTGGGCAGCATTAAATCCAAA +
Preference number: 6 (lower is better)
Translates to: RIRSINDSLHQS*TPEVLGSIKSK
Trigger: TTTGGATTTAATGCTGCCCAAGACTTCTGGTGTTCAACTTTGGTGAAGGGAGTCATTTATGGATCGTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS TCA 72 bp TTGATGTCTGTTAGAACAGAGGCTGCAGGAAGCTTCTaGATACTAGCCACTACATTTCCAGTCATTAAGTAT +
Preference number: 6 (lower is better)
Translates to: LMSVRTEAAGSF*ILATTFPVIKY
Trigger: ATACTTAATGACTGGAAATGTAGTGGCTAGTATTCAGAAGCTTCCTGCAGCCTCTGTTCTAACAGACATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 72 bp ATGAATCAAACACAGCAAAAAGTATTTGAAACAATATaGAGCGTTTATCTGTCATGGCCAGAACCGCAGACA +
Preference number: 6 (lower is better)
Translates to: MNQTQQKVFETI*SVYLSWPEPQT
Trigger: TGTCTGCGGTTCTGGCCATGACAGATAAACGCTCCATATTGTTTCAAATACTTTTTGCTGTGTTTGATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 72 bp CTTGTTTGGTGCGGGGTTTTCCATACTGCTTGTATTTaGTATATCCCGAAATCTGTCCAAAGTTTGAAATTT +
Preference number: 6 (lower is better)
Translates to: LVWCGVFHTACI*YIPKSVQSLKF
Trigger: AAATTTCAAACTTTGGACAGATTTCGGGATATACCAAATACAAGCAGTATGGAAAACCCCGCACCAAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CAA 72 bp TCTTGTTTGGTGCGGGGTTTTCCATACTGCTTGTATTaGGTATATCCCGAAATCTGTCCAAAGTTTGAAATT +
Preference number: 6 (lower is better)
Translates to: SCLVRGFPYCLY*VYPEICPKFEI
Trigger: AATTTCAAACTTTGGACAGATTTCGGGATATACCAAATACAAGCAGTATGGAAAACCCCGCACCAAACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS TCA 72 bp CTAGCCACTACATTTCCAGTCATTAAGTATGAATTCTaGAAGTCCATCATCCCCATTCCAACAATGTGTATA +
Preference number: 6 (lower is better)
Translates to: LATTFPVIKYEF*KSIIPIPTMCI
Trigger: TATACACATTGTTGGAATGGGGATGATGGACTTTCAGAATTCATACTTAATGACTGGAAATGTAGTGGCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 72 bp GGAAAATTTCAGGTAAATGCTATATTTGGTTGGATCTaGATTTTCCAGCGTCCAAGTGCAGTTTGTAAAGTT +
Preference number: 6 (lower is better)
Translates to: GKFQVNAIFGWI*IFQRPSAVCKV
Trigger: AACTTTACAAACTGCACTTGGACGCTGGAAAATCCAGATCCAACCAAATATAGCATTTACCTGAAATTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1
CDS CCA 72 bp CTTCTTTCATTGAAGGCTGGTTATTTACAGAACTTCTaGGCATCACAATATAGTCACTTTCCATCATTCTTT +
Preference number: 6 (lower is better)
Translates to: LLSLKAGYLQNF*ASQYSHFPSFF
Trigger: AAAGAATGATGGAAAGTGACTATATTGTGATGCCCAGAAGTTCTGTAAATAACCAGCCTTCAATGAAAGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000238918.12
ENST00000370598.6
ENST00000546190.5
ENST00000684661.1