RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000152990

Ensembl transcript IDs: ENST00000282943.9, ENST00000334304.10, ENST00000499527.6, ENST00000502482.1, ENST00000506155.1, ENST00000506346.1, ENST00000508133.5, ENST00000511051.5, ENST00000513385.5, ENST00000514749.5

Found 264 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTAGGAAGCCATACTCCCCCAAAACCATACTGGAGAATGGACACTaGTTCTCCTTCACCTTCTGCCATGATTGTAAGTTTCCCGAGGGC +
Preference number: 1 (lower is better)
Translates to: GRKPYSPKTILENGH*FSFTFCHDCKFPEG
Trigger: GCCCTCGGGAAACTTACAATCATGGCAGAAGGTGAAGGAGAAGCAGTGTCCATTCTCCAGTATGGTTTTGGGGGAGTATGGCTTCCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511051.5
3UTR CCA 90 bp ACAGAAGTTCACAATTCTCTCATGTTACAGCCCAGAGTTGACAGGTaGTCCGCAGTAGGTAGGAAGCCATACTCCCCCAAAACCATACTG +
Preference number: 1 (lower is better)
Translates to: TEVHNSLMLQPRVDR*SAVGRKPYSPKTIL
Trigger: CAGTATGGTTTTGGGGGAGTATGGCTTCCTACCTACTGCGGACCACCTGTCAACTCTGGGCTGTAACATGAGAGAATTGTGAACTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511051.5
3UTR CAA 90 bp TGCTTGATTAAACACCTGGTCTCAGGGTTGACTTCTCCACTAGGCTaGGCAGGCGCAGTGCCAAAGGCTCATGATACTTTTAGGGGCCCA +
Preference number: 2 (lower is better)
Translates to: CLIKHLVSGLTSPLG*AGAVPKAHDTFRGP
Trigger: TGGGCCCCTAAAAGTATCATGAGCCTTTGGCACTGCGCCTGCCAAGCCTAGTGGAGAAGTCAACCCTGAGACCAGGTGTTTAATCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502482.1
3UTR-3UTR CCA 90 bp CTAGTTGCTAATGTGGCACTGAGTTACAGCACAGGCTACATGGCTGAAAAAGAGCCCAGAGTTGACAGGTaGTCCGCAGTAGGTAGGAAG +
Preference number: 2 (lower is better)
Translates to: LVANVALSYSTGYMAEKEPRVDR*SAVGRK
Trigger: CTTCCTACCTACTGCGGACCACCTGTCAACTCTGGG...CTCTTTTTCAGCCATGTAGCCTGTGCTGTAACTCAGTGCCACATTAGCAACTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511051.5
3UTR-3UTR GCA 90 bp TTGAGTGCTCACACTAAACCAGAACACCTAACACCTGTTGGATCAGTTATTATGGTGGTTCCATTAGGGTaGTGGAGTTGTGCCTCCTCT +
Preference number: 2 (lower is better)
Translates to: LSAHTKPEHLTPVGSVIMVVPLG*WSCASS
Trigger: AGAGGAGGCACAACTCCAGCACCCTAATGGAACCAC...CATAATAACTGATCCAACAGGTGTTAGGTGTTCTGGTTTAGTGTGAGCACTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
3UTR-3UTR TCA 90 bp TTGAGTGCTCACACTAAACCAGAACACCTAACACCTGTTGGATCAGTTATTATGGATATACAGCTTGCTTaGTTAAACACCTGGTCTCAG +
Preference number: 2 (lower is better)
Translates to: LSAHTKPEHLTPVGSVIMDIQLA*LNTWSQ
Trigger: CTGAGACCAGGTGTTTAATCAAGCAAGCTGTATATC...CATAATAACTGATCCAACAGGTGTTAGGTGTTCTGGTTTAGTGTGAGCACTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
3UTR-3UTR GCA 90 bp TTGAGTGCTCACACTAAACCAGAACACCTAACACCTGTTGGATCAGTTATTATGAATCAAAGGCAAAAATaGCTAGGGCCCTTGAAAGTC +
Preference number: 2 (lower is better)
Translates to: LSAHTKPEHLTPVGSVIMNQRQK*LGPLKV
Trigger: GACTTTCAAGGGCCCTAGGCATTTTTGCCTTTGATT...CATAATAACTGATCCAACAGGTGTTAGGTGTTCTGGTTTAGTGTGAGCACTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502482.1
3UTR-3UTR GCA 90 bp CAAATTCTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCGTTTATATGAATTTCTaGCTAGGAAGCCCAGCAATG +
Preference number: 2 (lower is better)
Translates to: QILLNPYGGCKQFLNAHSVYMNF*LGSPAM
Trigger: CATTGCTGGGCTTCCTAGGCAGAAATTCATATAAAC...GCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAGAATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
3UTR CCA 72 bp CACAATTCTCTCATGTTACAGCCCAGAGTTGACAGGTaGTCCGCAGTAGGTAGGAAGCCATACTCCCCCAAA +
Preference number: 3 (lower is better)
Translates to: HNSLMLQPRVDR*SAVGRKPYSPK
Trigger: TTTGGGGGAGTATGGCTTCCTACCTACTGCGGACCACCTGTCAACTCTGGGCTGTAACATGAGAGAATTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511051.5
3UTR GCA 72 bp CCATACTCCCCCAAAACCATACTGGAGAATGGACACTaGTTCTCCTTCACCTTCTGCCATGATTGTAAGTTT +
Preference number: 3 (lower is better)
Translates to: PYSPKTILENGH*FSFTFCHDCKF
Trigger: AAACTTACAATCATGGCAGAAGGTGAAGGAGAAGCAGTGTCCATTCTCCAGTATGGTTTTGGGGGAGTATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511051.5
3UTR-3UTR CAA 90 bp TTGGGCTTATGGAACTTTAAGGTGATTTATGATGAATTCAAACCTCCACACAACTGTACAATCTTTTTCTaGGCTTCTAACCTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: LGLWNFKVIYDEFKPPHNCTIFF*ASNLSS
Trigger: AGAAGAGAGGTTAGAAGCCAAGAAAAAGATTGTACA...GTTGTGTGGAGGTTTGAATTCATCATAAATCACCTTAAAGTTCCATAAGCCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508133.5
CDS-3UTR GCA 90 bp CACCTGGTCTCAGGGTTGACTTCTCCACTAGGCTTGGCAGGCGCAGTGCCAAAGGCTTTAGCTTCCCTCTaGGCCAGCCACAGGACACGT +
Preference number: 4 (lower is better)
Translates to: HLVSGLTSPLGLAGAVPKALASL*ASHRTR
Trigger: ACGTGTCCTGTGGCTGGCGCAGAGGGAAGCTAAAGC...CTTTGGCACTGCGCCTGCCAAGCCTAGTGGAGAAGTCAACCCTGAGACCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR CCA 90 bp TTCCCGAGGGCTCCCCAGAAGCCAAGCAGATGCCAGCGTCATGACTGCTGTACACCCAGAGTTGACAGGTaGTCCGCAGTAGGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: FPRAPQKPSRCQRHDCCTPRVDR*SAVGRK
Trigger: CTTCCTACCTACTGCGGACCACCTGTCAACTCTGGG...TGTACAGCAGTCATGACGCTGGCATCTGCTTGGCTTCTGGGGAGCCCTCGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR GCA 90 bp CACCTGGTCTCAGGGTTGACTTCTCCACTAGGCTTGGCAGGCGCAGTGCCAAAGGTGGTTCCATTAGGGTaGTGGAGTTGTGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HLVSGLTSPLGLAGAVPKVVPLG*WSCASS
Trigger: AGAGGAGGCACAACTCCAGCACCCTAATGGAACCAC...CTTTGGCACTGCGCCTGCCAAGCCTAGTGGAGAAGTCAACCCTGAGACCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR CCA 90 bp CACCTGGTCTCAGGGTTGACTTCTCCACTAGGCTTGGCAGGCGCAGTGCCAAAGATCCAGGTTTCCCTCTaGATCCCGCCTCCCATAATC +
Preference number: 4 (lower is better)
Translates to: HLVSGLTSPLGLAGAVPKIQVSL*IPPPII
Trigger: GATTATGGGAGGCGGGATCCAGAGGGAAACCTGGAT...CTTTGGCACTGCGCCTGCCAAGCCTAGTGGAGAAGTCAACCCTGAGACCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR GCA 90 bp GTGAAGAAAGGGAATCAAAGGCAAAAATGCCTAGGGCCCTTGAAAGTCGTAATGTCCCCGGCGCGGACATaGTCCTTTGTCCGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: VKKGNQRQKCLGPLKVVMSPART*SFVRCG
Trigger: GCCGCAGCGGACAAAGGAGCATGTCCGCGCCGGGGA...CATTACGACTTTCAAGGGCCCTAGGCATTTTTGCCTTTGATTCCCTTTCTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR GCA 90 bp CACCTGGTCTCAGGGTTGACTTCTCCACTAGGCTTGGCAGGCGCAGTGCCAAAGAGGGTGCTGGAGTTGTaGCTCCTCTATTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: HLVSGLTSPLGLAGAVPKRVLEL*LLYLLQ
Trigger: TTGAAGCAAATAGAGGAGGCACAACTCCAGCACCCT...CTTTGGCACTGCGCCTGCCAAGCCTAGTGGAGAAGTCAACCCTGAGACCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR GCA 90 bp CACCTGGTCTCAGGGTTGACTTCTCCACTAGGCTTGGCAGGCGCAGTGCCAAAGCACTTAAAGCTCAGCTaGTTATCCAGGTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: HLVSGLTSPLGLAGAVPKHLKLS*LSRFPS
Trigger: AGAGGGAAACCTGGATAAGCAGCTGAGCTTTAAGTG...CTTTGGCACTGCGCCTGCCAAGCCTAGTGGAGAAGTCAACCCTGAGACCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR TCA 90 bp CACCTGGTCTCAGGGTTGACTTCTCCACTAGGCTTGGCAGGCGCAGTGCCAAAGATGTTCTGGGCCATCTaGAGTCACCTTTGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: HLVSGLTSPLGLAGAVPKMFWAI*SHLCCL
Trigger: TAAACAACAAAGGTGACTTCAGATGGCCCAGAACAT...CTTTGGCACTGCGCCTGCCAAGCCTAGTGGAGAAGTCAACCCTGAGACCAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR CCA 90 bp CACAATTCTCTCATGTTACAGCCCAGAGTTGACAGGTGGTCCGCAGTAGGTAGGGAGCATTGGTCTTGGTaGAGGTGGTGGTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: HNSLMLQPRVDRWSAVGREHWSW*RWWFIR
Trigger: CCTGATGAACCACCACCTCCACCAAGACCAATGCTC...CCTACCTACTGCGGACCACCTGTCAACTCTGGGCTGTAACATGAGAGAATTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR TCA 90 bp GACACTGCTTCTCCTTCACCTTCTGCCATGATTGTAAGTTTCCCGAGGGCTCCCTTATGCCGCAAACAATaGTGGGGATACCACCACCAA +
Preference number: 4 (lower is better)
Translates to: DTASPSPSAMIVSFPRAPLCRKQ*WGYHHQ
Trigger: TTGGTGGTGGTATCCCCATCATTGTTTGCGGCATAA...GGGAGCCCTCGGGAAACTTACAATCATGGCAGAAGGTGAAGGAGAAGCAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR GCA 90 bp TTGAGTGCTCACACTAAACCAGAACACCTAACACCTGTTGGATCAGTTATTATGTTTGTCCGCTGCGGCTaGGCTGGGCCTCTAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LSAHTKPEHLTPVGSVIMFVRCG*AGPLGS
Trigger: GCTCCCTAGAGGCCCAGCGCAGCCGCAGCGGACAAA...CATAATAACTGATCCAACAGGTGTTAGGTGTTCTGGTTTAGTGTGAGCACTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR CCA 90 bp CTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGGGGTCACGGCCGCATaGGTCCCAGCGCCGCTCTAC +
Preference number: 4 (lower is better)
Translates to: LLNPYGGCKQFLNAHSFKGVTAA*VPAPLY
Trigger: GTAGAGCGGCGCTGGGACCCATGCGGCCGTGACCCC...CTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334304.10
3UTR CAA 72 bp AAACACCTGGTCTCAGGGTTGACTTCTCCACTAGGCTaGGCAGGCGCAGTGCCAAAGGCTCATGATACTTTT +
Preference number: 4 (lower is better)
Translates to: KHLVSGLTSPLG*AGAVPKAHDTF
Trigger: AAAAGTATCATGAGCCTTTGGCACTGCGCCTGCCAAGCCTAGTGGAGAAGTCAACCCTGAGACCAGGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR TCA 90 bp AGTGCTCACACTAAACCAGAACACCTAACACCTGTTGGATCAGTTATTATGCAGTACTCAGAATCAGGGTaGCCGTGCGGTTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SAHTKPEHLTPVGSVIMQYSESG*PCGWAE
Trigger: CTCTGCCCAACCGCACGGTCACCCTGATTCTGAGTA...CTGCATAATAACTGATCCAACAGGTGTTAGGTGTTCTGGTTTAGTGTGAGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR TCA 90 bp AAACCATGGCTCAAACAAGACAGAAGTTCACAATTCTCTCATGTTACAGCCCAGGTTACAGCCCAGAGTTaGCAGGTGGTCCGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: KPWLKQDRSSQFSHVTAQVTAQS*QVVRSR
Trigger: CCTACTGCGGACCACCTGTCAACTCTGGGCTGTAAC...CTGGGCTGTAACATGAGAGAATTGTGAACTTCTGTCTTGTTTGAGCCATGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR GCA 90 bp ATGATTGTAAGTTTCCCGAGGGCTCCCCAGAAGCCAAGCAGATGCCAGCGTCATATTCTTAATGTTCGCTaGTGCAGTTATGCCGCAAAC +
Preference number: 4 (lower is better)
Translates to: MIVSFPRAPQKPSRCQRHILNVR*CSYAAN
Trigger: GTTTGCGGCATAACTGCAGCAGCGAACATTAAGAAT...ATGACGCTGGCATCTGCTTGGCTTCTGGGGAGCCCTCGGGAAACTTACAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR GCA 90 bp CTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGTTTGTCCGCTGCGGCTaGGCTGGGCCTCTAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLNPYGGCKQFLNAHSFKFVRCG*AGPLGS
Trigger: GCTCCCTAGAGGCCCAGCGCAGCCGCAGCGGACAAA...CTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp CAAATTCTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTCCCCGGCGCGGACATaGTCCTTTGTCCGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: QILLNPYGGCKQFLNAHSSPART*SFVRCG
Trigger: GCCGCAGCGGACAAAGGAGCATGTCCGCGCCGGGGA...GCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAGAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp AAACCATGGCTCAAACAAGACAGAAGTTCACAATTCTCTCATGTTACAGCCCAGGCTGTACAGCTAGGGTaGGTTTGGCCGACTGCCGTA +
Preference number: 4 (lower is better)
Translates to: KPWLKQDRSSQFSHVTAQAVQLG*VWPTAV
Trigger: TACGGCAGTCGGCCAAACGCACCCTAGCTGTACAGC...CTGGGCTGTAACATGAGAGAATTGTGAACTTCTGTCTTGTTTGAGCCATGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR TCA 90 bp GAAGTTCACAATTCTCTCATGTTACAGCCCAGAGTTGACAGGTGGTCCGCAGTATTGCTAATGTGGCACTaGGTTACAGCACAGGCTACA +
Preference number: 4 (lower is better)
Translates to: EVHNSLMLQPRVDRWSAVLLMWH*VTAQAT
Trigger: TGTAGCCTGTGCTGTAACTCAGTGCCACATTAGCAA...TACTGCGGACCACCTGTCAACTCTGGGCTGTAACATGAGAGAATTGTGAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR GCA 90 bp CACAATTCTCTCATGTTACAGCCCAGAGTTGACAGGTGGTCCGCAGTAGGTAGGCTTAATGTTCGCTGCTaGAGTTATGCCGCAAACAAT +
Preference number: 4 (lower is better)
Translates to: HNSLMLQPRVDRWSAVGRLNVRC*SYAANN
Trigger: ATTGTTTGCGGCATAACTGCAGCAGCGAACATTAAG...CCTACCTACTGCGGACCACCTGTCAACTCTGGGCTGTAACATGAGAGAATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR CCA 90 bp CTAGTTGCTAATGTGGCACTGAGTTACAGCACAGGCTACATGGCTGAAAAAGAGTCTGAGCATTGGTCTTaGTGGAGGTGGTGGTTCATC +
Preference number: 4 (lower is better)
Translates to: LVANVALSYSTGYMAEKESEHWS*WRWWFI
Trigger: GATGAACCACCACCTCCACCAAGACCAATGCTCAGA...CTCTTTTTCAGCCATGTAGCCTGTGCTGTAACTCAGTGCCACATTAGCAACTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR CCA 90 bp GAAGTTCACAATTCTCTCATGTTACAGCCCAGAGTTGACAGGTGGTCCGCAGTACCCCCAAAACCATACTaGAGAATGGACACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: EVHNSLMLQPRVDRWSAVPPKPY*RMDTAS
Trigger: AGAAGCAGTGTCCATTCTCCAGTATGGTTTTGGGGG...TACTGCGGACCACCTGTCAACTCTGGGCTGTAACATGAGAGAATTGTGAACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR TCA 90 bp GGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATCACAGTGAATTGGCATGGCACTaGGCTGCAGCCGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GCKQFLNAHSFKECEYHSELAWH*AAAACK
Trigger: CTTGCAGGCGGCTGCAGCTCAGTGCCATGCCAATTC...ACTGTGATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR TCA 90 bp GCTCATAGCTTCAAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGATTCTCTCAGGACTGTaGGTCGGCTTGCCCGGTGTC +
Preference number: 4 (lower is better)
Translates to: AHSFKECEYHSLYEFLPRILSGL*VGLPGV
Trigger: GACACCGGGCAAGCCGACTCACAGTCCTGAGAGAAT...CCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTTGAAGCTATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp GTGAAGAAAGGGAATCAAAGGCAAAAATGCCTAGGGCCCTTGAAAGTCGTAATGTGTACGATCAGAGGCTaGCACTTTCTGGAACACGGT +
Preference number: 4 (lower is better)
Translates to: VKKGNQRQKCLGPLKVVMCTIRG*HFLEHG
Trigger: ACCGTGTTCCAGAAAGTGGCAGCCTCTGATCGTACA...CATTACGACTTTCAAGGGCCCTAGGCATTTTTGCCTTTGATTCCCTTTCTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR GCA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGGCTGCCAATCTCTGTTaGTCCTCCGTGGGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: PYGGCKQFLNAHSFKECEAANLC*SSVGSL
Trigger: TAAGGAGCCCACGGAGGAGCAACAGAGATTGGCAGC...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp AGTGCTCACACTAAACCAGAACACCTAACACCTGTTGGATCAGTTATTATGCAGGAGGCTGCCACTTTCTaGAACACGGTACAGGTCATC +
Preference number: 4 (lower is better)
Translates to: SAHTKPEHLTPVGSVIMQEAATF*NTVQVI
Trigger: GATGACCTGTACCGTGTTCCAGAAAGTGGCAGCCTC...CTGCATAATAACTGATCCAACAGGTGTTAGGTGTTCTGGTTTAGTGTGAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR GCA 90 bp GCTCATAGCTTCAAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGCAAGGAGGGTTCCCATaGCATCCAGCAATAGGGTGC +
Preference number: 4 (lower is better)
Translates to: AHSFKECEYHSLYEFLPRQGGFP*HPAIGC
Trigger: GCACCCTATTGCTGGATGGCATGGGAACCCTCCTTG...CCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTTGAAGCTATGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGGGCTGGACGTTGACTTaGACTGAATACGAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: PYGGCKQFLNAHSFKECEGWTLT*TEYELR
Trigger: ACGGAGCTCGTATTCAGTGCAAGTCAACGTCCAGCC...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp TTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAAGGCATGGCACTGAGCTaGAGCCGCCTGCAAGTTTGT +
Preference number: 4 (lower is better)
Translates to: LNPYGGCKQFLNAHSFKEGMALS*SRLQVC
Trigger: ACAAACTTGCAGGCGGCTGCAGCTCAGTGCCATGCC...TTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp AAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGAAGCCCAGCAATGCATCGCTGCTGTCTTaGTGGGGTGGGTTGTACTGT +
Preference number: 4 (lower is better)
Translates to: KECEYHSLYEFLPRKPSNASLLS*WGGLYC
Trigger: ACAGTACAACCCACCCCAGCAAGACAGCAGCGATGC...ATTGCTGGGCTTCCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp TTGAGTGCTCACACTAAACCAGAACACCTAACACCTGTTGGATCAGTTATTATGGCTTGGCAGGCGCAGTaGCAAAGGCTCATGATACTT +
Preference number: 4 (lower is better)
Translates to: LSAHTKPEHLTPVGSVIMAWQAQ*QRLMIL
Trigger: AAGTATCATGAGCCTTTGGCACTGCGCCTGCCAAGC...CATAATAACTGATCCAACAGGTGTTAGGTGTTCTGGTTTAGTGTGAGCACTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR CCA 90 bp GTGAAGAAAGGGAATCAAAGGCAAAAATGCCTAGGGCCCTTGAAAGTCGTAATGGTTCCATTAGGGTGCTaGAGTTGTGCCTCCTCTATT +
Preference number: 4 (lower is better)
Translates to: VKKGNQRQKCLGPLKVVMVPLGC*SCASSI
Trigger: AATAGAGGAGGCACAACTCCAGCACCCTAATGGAAC...CATTACGACTTTCAAGGGCCCTAGGCATTTTTGCCTTTGATTCCCTTTCTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR TCA 90 bp AAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGAAGCCCAGCAATTATATGGCACCCATCTaGCTTCCAGCCTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: KECEYHSLYEFLPRKPSNYMAPI*LPASLS
Trigger: GGACAAGGAGGCTGGAAGTCAGATGGGTGCCATATA...ATTGCTGGGCTTCCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR TCA 90 bp GGCTCAAACAAGACAGAAGTTCACAATTCTCTCATGTTACAGCCCAGAGTTGACCAATCAGGTAAAATCTaGGCATTGGTCTTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GSNKTEVHNSLMLQPRVDQSGKI*ALVLVE
Trigger: CTCCACCAAGACCAATGCTCAGATTTTACCTGATTG...GTCAACTCTGGGCTGTAACATGAGAGAATTGTGAACTTCTGTCTTGTTTGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR TCA 90 bp GGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATCACAGTGACGTTGACTTGCACTaGATACGAGCTCCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GCKQFLNAHSFKECEYHSDVDLH*IRAPSW
Trigger: CCAGGACGGAGCTCGTATTCAGTGCAAGTCAACGTC...ACTGTGATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR TCA 90 bp CAAATTCTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTACTCAGAATCAGGGTaGCCGTGCGGTTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QILLNPYGGCKQFLNAHSYSESG*PCGWAE
Trigger: CTCTGCCCAACCGCACGGTCACCCTGATTCTGAGTA...GCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAGAATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp TATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATGCTTTAGCTTCCCTCTaGGCCAGCCACAGGACACGT +
Preference number: 4 (lower is better)
Translates to: YGGCKQFLNAHSFKECEYALASL*ASHRTR
Trigger: ACGTGTCCTGTGGCTGGCGCAGAGGGAAGCTAAAGC...ATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGAGCATCTGCTCCATGTaGAATTCGACGCAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: PYGGCKQFLNAHSFKECESICSM*NSTQCH
Trigger: GTGACACTGCGTCGAATTGCACATGGAGCAGATGCT...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp GGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATCACAGTGAAATCCCACCGGGCTaGAACAGCATCTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: GCKQFLNAHSFKECEYHSEIPPG*NSICSM
Trigger: CATGGAGCAGATGCTGTTGCAGCCCGGTGGGATTTC...ACTGTGATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGATGAAGACTCCGCACTaGTATTGGGGCATTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PYGGCKQFLNAHSFKECEMKTPH*YWGIWV
Trigger: CACCCAAATGCCCCAATAGCAGTGCGGAGTCTTCAT...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp GGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATCACAGTTGCTACAAGCATCGCTaGTGTCTTGCTGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GCKQFLNAHSFKECEYHSCYKHR*CLAGVG
Trigger: ACCCACCCCAGCAAGACAGCAGCGATGCTTGTAGCA...ACTGTGATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp TATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATAGGAGGCTGGCCGCCTaGGTGTATAGTTCAGATCCC +
Preference number: 4 (lower is better)
Translates to: YGGCKQFLNAHSFKECEYRRLAA*VYSSDP
Trigger: GGGATCTGAACTATACACCCAGGCGGCCAGCCTCCT...ATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp AAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGAAGCCCAGCAATATACGAGCTCCGTCCTaGGCAGCAAGTCATGATCCA +
Preference number: 4 (lower is better)
Translates to: KECEYHSLYEFLPRKPSNIRAPS*AASHDP
Trigger: TGGATCATGACTTGCTGCCCAGGACGGAGCTCGTAT...ATTGCTGGGCTTCCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp GCTCATAGCTTCAAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGTGCTATTGGGGCATTTaGGTGCCTCTCCATTCGTCC +
Preference number: 4 (lower is better)
Translates to: AHSFKECEYHSLYEFLPRCYWGI*VPLHSS
Trigger: GGACGAATGGAGAGGCACCCAAATGCCCCAATAGCA...CCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTTGAAGCTATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTCCTTCCACGCTCGTTaGGACATCGTAGGCATATTC +
Preference number: 4 (lower is better)
Translates to: PYGGCKQFLNAHSFKECESFHAR*DIVGIF
Trigger: GAATATGCCTACGATGTCCCAACGAGCGTGGAAGGA...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp AAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGAAGCCCAGCAATGCTGTCTTGCTGGGGTaGGTTGTACTGTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: KECEYHSLYEFLPRKPSNAVLLG*VVLSLS
Trigger: AGAGAGAGACAGTACAACCCACCCCAGCAAGACAGC...ATTGCTGGGCTTCCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR TCA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTTATGCCGCAAACAATaGTGGGGATACCACCACCAA +
Preference number: 4 (lower is better)
Translates to: PYGGCKQFLNAHSFKECELCRKQ*WGYHHQ
Trigger: TTGGTGGTGGTATCCCCATCATTGTTTGCGGCATAA...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR TCA 90 bp AAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGAAGCCCAGCAATCCACGAAGAACGCACTaGAGCTTAAACTTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: KECEYHSLYEFLPRKPSNPRRTH*SLNLWL
Trigger: GAGCCACAAGTTTAAGCTTCAGTGCGTTCTTCGTGG...ATTGCTGGGCTTCCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp CAAATTCTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCCATCCAGCAATAGGGTaGGTTTGGCCGACTGCCGTA +
Preference number: 4 (lower is better)
Translates to: QILLNPYGGCKQFLNAHSHPAIG*VWPTAV
Trigger: TACGGCAGTCGGCCAAACGCACCCTATTGCTGGATG...GCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAGAATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp CTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGACTGTGAGTCGGCTTaGCCGGTGTCCTTTACTTCT +
Preference number: 4 (lower is better)
Translates to: LLNPYGGCKQFLNAHSFKDCESA*PVSFTS
Trigger: AGAAGTAAAGGACACCGGGCAAGCCGACTCACAGTC...CTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp TTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATTAGGTAAGCCGTTCTaGACGCTTCCTTCCACGCTC +
Preference number: 4 (lower is better)
Translates to: LNPYGGCKQFLNAHSFKELGKPF*TLPSTL
Trigger: GAGCGTGGAAGGAAGCGTGCAGAACGGCTTACCTAA...TTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp GTGAAGAAAGGGAATCAAAGGCAAAAATGCCTAGGGCCCTTGAAAGTCGTAATGAATCAAAGGCAAAAATaGCTAGGGCCCTTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: VKKGNQRQKCLGPLKVVMNQRQK*LGPLKV
Trigger: GACTTTCAAGGGCCCTAGGCATTTTTGCCTTTGATT...CATTACGACTTTCAAGGGCCCTAGGCATTTTTGCCTTTGATTCCCTTTCTTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR CCA 90 bp GGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATCACAGTGAGGCTGCCACTTTCTaGAACACGGTACAGGTCATC +
Preference number: 4 (lower is better)
Translates to: GCKQFLNAHSFKECEYHSEAATF*NTVQVI
Trigger: GATGACCTGTACCGTGTTCCAGAAAGTGGCAGCCTC...ACTGTGATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp TTGGGCTTATGGAACTTTAAGGTGATTTATGATGAATTCAAACCTCCACACAACGAGGCTGCCACTTTCTaGAACACGGTACAGGTCATC +
Preference number: 4 (lower is better)
Translates to: LGLWNFKVIYDEFKPPHNEAATF*NTVQVI
Trigger: GATGACCTGTACCGTGTTCCAGAAAGTGGCAGCCTC...GTTGTGTGGAGGTTTGAATTCATCATAAATCACCTTAAAGTTCCATAAGCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508133.5
CDS-3UTR CCA 90 bp GGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATCACAGTATCCAGGTTTCCCTCTaGATCCCGCCTCCCATAATC +
Preference number: 4 (lower is better)
Translates to: GCKQFLNAHSFKECEYHSIQVSL*IPPPII
Trigger: GATTATGGGAGGCGGGATCCAGAGGGAAACCTGGAT...ACTGTGATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp TTGGGCTTATGGAACTTTAAGGTGATTTATGATGAATTCAAACCTCCACACAACATCCAGGTTTCCCTCTaGATCCCGCCTCCCATAATC +
Preference number: 4 (lower is better)
Translates to: LGLWNFKVIYDEFKPPHNIQVSL*IPPPII
Trigger: GATTATGGGAGGCGGGATCCAGAGGGAAACCTGGAT...GTTGTGTGGAGGTTTGAATTCATCATAAATCACCTTAAAGTTCCATAAGCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508133.5
CDS-3UTR CCA 90 bp AAACCATGGCTCAAACAAGACAGAAGTTCACAATTCTCTCATGTTACAGCCCAGCTACCCATAGTACTGTaGCAAGGGTGGAATAGTGAA +
Preference number: 4 (lower is better)
Translates to: KPWLKQDRSSQFSHVTAQLPIVL*QGWNSE
Trigger: TTCACTATTCCACCCTTGCCACAGTACTATGGGTAG...CTGGGCTGTAACATGAGAGAATTGTGAACTTCTGTCTTGTTTGAGCCATGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR CCA 90 bp GGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATCACAGTGAGCATTGGTCTTGGTaGAGGTGGTGGTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: GCKQFLNAHSFKECEYHSEHWSW*RWWFIR
Trigger: CCTGATGAACCACCACCTCCACCAAGACCAATGCTC...ACTGTGATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp GGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATCACAGTAGTGATGAAGCTGGCTaGCCCATAGAAGGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: GCKQFLNAHSFKECEYHSSDEAG*PIEGSQ
Trigger: TTGGGAGCCTTCTATGGGCCAGCCAGCTTCATCACT...ACTGTGATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp CAAATTCTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCACTCCGCACTGCTATTaGGGCATTTGGGTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: QILLNPYGGCKQFLNAHSTPHCY*GIWVPL
Trigger: GAGAGGCACCCAAATGCCCCAATAGCAGTGCGGAGT...GCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAGAATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp CAAATTCTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTCGCTGCTGTCTTGCTaGGGTGGGTTGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: QILLNPYGGCKQFLNAHSSLLSC*GGLYCL
Trigger: GAGACAGTACAACCCACCCCAGCAAGACAGCAGCGA...GCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAGAATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp GTGAAGAAAGGGAATCAAAGGCAAAAATGCCTAGGGCCCTTGAAAGTCGTAATGTCCCCAGAAGGCACCTaGATCTATACTACTAATAAG +
Preference number: 4 (lower is better)
Translates to: VKKGNQRQKCLGPLKVVMSPEGT*IYTTNK
Trigger: CTTATTAGTAGTATAGATCCAGGTGCCTTCTGGGGA...CATTACGACTTTCAAGGGCCCTAGGCATTTTTGCCTTTGATTCCCTTTCTTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR CCA 90 bp AAAGAGAATGAAACCATGGCTCAAACAAGACAGAAGTTCACAATTCTCTCATGTCAGCTAGGGTGCGTTTaGCCGACTGCCGTAATTCTT +
Preference number: 4 (lower is better)
Translates to: KENETMAQTRQKFTILSCQLGCV*PTAVIL
Trigger: AAGAATTACGGCAGTCGGCCAAACGCACCCTAGCTG...ACATGAGAGAATTGTGAACTTCTGTCTTGTTTGAGCCATGGTTTCATTCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR CCA 90 bp AAACCATGGCTCAAACAAGACAGAAGTTCACAATTCTCTCATGTTACAGCCCAGAACCATACTGGAGAATaGACACTGCTTCTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: KPWLKQDRSSQFSHVTAQNHTGE*TLLLLH
Trigger: GTGAAGGAGAAGCAGTGTCCATTCTCCAGTATGGTT...CTGGGCTGTAACATGAGAGAATTGTGAACTTCTGTCTTGTTTGAGCCATGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR CCA 90 bp GAAGTTCACAATTCTCTCATGTTACAGCCCAGAGTTGACAGGTGGTCCGCAGTAAAGAGAATGAAACCATaGCTCAAACAAGACAGAAGT +
Preference number: 4 (lower is better)
Translates to: EVHNSLMLQPRVDRWSAVKRMKP*LKQDRS
Trigger: ACTTCTGTCTTGTTTGAGCCATGGTTTCATTCTCTT...TACTGCGGACCACCTGTCAACTCTGGGCTGTAACATGAGAGAATTGTGAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR GCA 90 bp CTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGTGTACGATCAGAGGCTaGCACTTTCTGGAACACGGT +
Preference number: 4 (lower is better)
Translates to: LLNPYGGCKQFLNAHSFKCTIRG*HFLEHG
Trigger: ACCGTGTTCCAGAAAGTGGCAGCCTCTGATCGTACA...CTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp TTGGGCTTATGGAACTTTAAGGTGATTTATGATGAATTCAAACCTCCACACAACTGTACGATCAGAGGCTaGCACTTTCTGGAACACGGT +
Preference number: 4 (lower is better)
Translates to: LGLWNFKVIYDEFKPPHNCTIRG*HFLEHG
Trigger: ACCGTGTTCCAGAAAGTGGCAGCCTCTGATCGTACA...GTTGTGTGGAGGTTTGAATTCATCATAAATCACCTTAAAGTTCCATAAGCCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508133.5
CDS-3UTR GCA 90 bp CAAATTCTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCGGCTGCAACAGCATCTaGTCCATGTGCAATTCGACG +
Preference number: 4 (lower is better)
Translates to: QILLNPYGGCKQFLNAHSGCNSI*SMCNST
Trigger: CGTCGAATTGCACATGGAGCAGATGCTGTTGCAGCC...GCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAGAATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp GCTCATAGCTTCAAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGGCCATTTTCATTGGCTaGCAATCTCTGTTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: AHSFKECEYHSLYEFLPRAIFIG*QSLLLL
Trigger: GAGGAGCAACAGAGATTGGCAGCCAATGAAAATGGC...CCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTTGAAGCTATGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp GGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATCACAGTATTGGGGCATTTGGGTaGCTCTCCATTCGTCCCATT +
Preference number: 4 (lower is better)
Translates to: GCKQFLNAHSFKECEYHSIGAFG*LSIRPI
Trigger: AATGGGACGAATGGAGAGGCACCCAAATGCCCCAAT...ACTGTGATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGAAGCACTTTTGTTTGTaGATGAAGACTCCGCACTGC +
Preference number: 4 (lower is better)
Translates to: PYGGCKQFLNAHSFKECEKHFCL*MKTPHC
Trigger: GCAGTGCGGAGTCTTCATGCACAAACAAAAGTGCTT...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTACTTTTGGGAAGTGTaGTACAAGCATCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PYGGCKQFLNAHSFKECEYFWEV*YKHRCC
Trigger: ACAGCAGCGATGCTTGTAGCACACTTCCCAAAAGTA...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp ATGGCTCAAACAAGACAGAAGTTCACAATTCTCTCATGTTACAGCCCAGAGTTGTTCTCCTTCACCTTCTaGCATGATTGTAAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: MAQTRQKFTILSCYSPELFSFTF*HDCKFP
Trigger: GGGAAACTTACAATCATGGCAGAAGGTGAAGGAGAA...CAACTCTGGGCTGTAACATGAGAGAATTGTGAACTTCTGTCTTGTTTGAGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR CCA 90 bp AAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGAAGCCCAGCAATCTGGCATTCCTAGTCTaGGTTATTCCTCCCACAAAG +
Preference number: 4 (lower is better)
Translates to: KECEYHSLYEFLPRKPSNLAFLV*VIPPTK
Trigger: CTTTGTGGGAGGAATAACCCAGACTAGGAATGCCAG...ATTGCTGGGCTTCCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp AATGAAACCATGGCTCAAACAAGACAGAAGTTCACAATTCTCTCATGTTACAGCCTGGCATTCCTAGTCTaGGTTATTCCTCCCACAAAG +
Preference number: 4 (lower is better)
Translates to: NETMAQTRQKFTILSCYSLAFLV*VIPPTK
Trigger: CTTTGTGGGAGGAATAACCCAGACTAGGAATGCCAG...GCTGTAACATGAGAGAATTGTGAACTTCTGTCTTGTTTGAGCCATGGTTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR CCA 90 bp CTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGTCTGAGCATTGGTCTTaGTGGAGGTGGTGGTTCATC +
Preference number: 4 (lower is better)
Translates to: LLNPYGGCKQFLNAHSFKSEHWS*WRWWFI
Trigger: GATGAACCACCACCTCCACCAAGACCAATGCTCAGA...CTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp AGTGCTCACACTAAACCAGAACACCTAACACCTGTTGGATCAGTTATTATGCAGACACCTAACACCTGTTaGATCAGTTATTATGCAGCC +
Preference number: 4 (lower is better)
Translates to: SAHTKPEHLTPVGSVIMQTPNTC*ISYYAA
Trigger: GGCTGCATAATAACTGATCCAACAGGTGTTAGGTGT...CTGCATAATAACTGATCCAACAGGTGTTAGGTGTTCTGGTTTAGTGTGAGCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
3UTR CAA 72 bp AAGAAAGGGAATCAAAGGCAAAAATGCCTAGGGCCCTaGAAAGTCGTAATGCAGTTCTTCCTGGTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: KKGNQRQKCLGP*KVVMQFFLVSF
Trigger: AAAACTAACCAGGAAGAACTGCATTACGACTTTCAAGGGCCCTAGGCATTTTTGCCTTTGATTCCCTTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR TCA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGATGTTCTGGGCCATCTaGAGTCACCTTTGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: PYGGCKQFLNAHSFKECEMFWAI*SHLCCL
Trigger: TAAACAACAAAGGTGACTTCAGATGGCCCAGAACAT...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR TCA 90 bp GCTCATAGCTTCAAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGTTTATGGTGGCGGCTTaGGTGCACATTTGTTCGAAA +
Preference number: 4 (lower is better)
Translates to: AHSFKECEYHSLYEFLPRFMVAA*VHICSK
Trigger: TTTCGAACAAATGTGCACTCAAGCCGCCACCATAAA...CCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTTGAAGCTATGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp GGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATCACAGTAGCAAGGGTCCCTCCTaGCCATTGCTTTTAATTGGT +
Preference number: 4 (lower is better)
Translates to: GCKQFLNAHSFKECEYHSSKGPS*PLLLIG
Trigger: ACCAATTAAAAGCAATGGGCAGGAGGGACCCTTGCT...ACTGTGATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp AAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGAAGCCCAGCAATATTATCCCAACTGCTTaGCAGATGCTGGCATTCCTA +
Preference number: 4 (lower is better)
Translates to: KECEYHSLYEFLPRKPSNIIPTA*QMLAFL
Trigger: TAGGAATGCCAGCATCTGCCAAGCAGTTGGGATAAT...ATTGCTGGGCTTCCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp CAAATTCTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCGCAATAGGGTGCGTTTaGCCGACTGCCGTAATTCTT +
Preference number: 4 (lower is better)
Translates to: QILLNPYGGCKQFLNAHSAIGCV*PTAVIL
Trigger: AAGAATTACGGCAGTCGGCCAAACGCACCCTATTGC...GCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAGAATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGCTTCTGTTTTTATGGTaGCGGCTTGAGTGCACATTT +
Preference number: 4 (lower is better)
Translates to: PYGGCKQFLNAHSFKECELLFLW*RLECTF
Trigger: AAATGTGCACTCAAGCCGCCACCATAAAAACAGAAG...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTTACTTCTGTTTTTATaGTGGCGGCTTGAGTGCACA +
Preference number: 4 (lower is better)
Translates to: PYGGCKQFLNAHSFKECELLLFL*WRLECT
Trigger: TGTGCACTCAAGCCGCCACCATAAAAACAGAAGTAA...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR TCA 90 bp TTGAGTGCTCACACTAAACCAGAACACCTAACACCTGTTGGATCAGTTATTATGGTTCATCAGCCAACATaGTGTTACTTGCAATGTCAA +
Preference number: 4 (lower is better)
Translates to: LSAHTKPEHLTPVGSVIMVHQPT*CYLQCQ
Trigger: TTGACATTGCAAGTAACATCATGTTGGCTGATGAAC...CATAATAACTGATCCAACAGGTGTTAGGTGTTCTGGTTTAGTGTGAGCACTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR TCA 90 bp TTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAACAATCAGGTAAAATCTaGGCATTGGTCTTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LNPYGGCKQFLNAHSFKEQSGKI*ALVLVE
Trigger: CTCCACCAAGACCAATGCTCAGATTTTACCTGATTG...TTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR TCA 90 bp CTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGAGACTATTATCAAGCTaGGGGGTGGAGTTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: LLNPYGGCKQFLNAHSFKRLLSS*GVEFKG
Trigger: ACCTTTGAACTCCACCCCTCAGCTTGATAATAGTCT...CTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR TCA 90 bp CTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGACATTTGTTCGAAACTaGACTTCTAAAGGCGCCACG +
Preference number: 4 (lower is better)
Translates to: LLNPYGGCKQFLNAHSFKTFVRN*TSKGAT
Trigger: CGTGGCGCCTTTAGAAGTTCAGTTTCGAACAAATGT...CTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR TCA 90 bp GGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATCACAGTTTAATTGGTCCATTCTaGATGGCCAAGTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GCKQFLNAHSFKECEYHSLIGPF*MAKLRP
Trigger: TGGCCTCAACTTGGCCATTCAGAATGGACCAATTAA...ACTGTGATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR TCA 90 bp CAAATTCTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCAGGGAAGGAGGAAGCTaGATAGAAGCCTCCACAATA +
Preference number: 4 (lower is better)
Translates to: QILLNPYGGCKQFLNAHSREGGS*IEASTI
Trigger: TATTGTGGAGGCTTCTATTCAGCTTCCTCCTTCCCT...GCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAGAATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp TTGAGTGCTCACACTAAACCAGAACACCTAACACCTGTTGGATCAGTTATTATGCAACATGATGTTACTTaGAATGTCAACCATCACGTC +
Preference number: 4 (lower is better)
Translates to: LSAHTKPEHLTPVGSVIMQHDVT*NVNHHV
Trigger: GACGTGATGGTTGACATTGCAAGTAACATCATGTTG...CATAATAACTGATCCAACAGGTGTTAGGTGTTCTGGTTTAGTGTGAGCACTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR GCA 90 bp TTGGGCTTATGGAACTTTAAGGTGATTTATGATGAATTCAAACCTCCACACAACCACTTAAAGCTCAGCTaGTTATCCAGGTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LGLWNFKVIYDEFKPPHNHLKLS*LSRFPS
Trigger: AGAGGGAAACCTGGATAAGCAGCTGAGCTTTAAGTG...GTTGTGTGGAGGTTTGAATTCATCATAAATCACCTTAAAGTTCCATAAGCCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508133.5
CDS-3UTR CCA 90 bp AAAGAGAATGAAACCATGGCTCAAACAAGACAGAAGTTCACAATTCTCTCATGTATTATCCCAACTGCTTaGCAGATGCTGGCATTCCTA +
Preference number: 4 (lower is better)
Translates to: KENETMAQTRQKFTILSCIIPTA*QMLAFL
Trigger: TAGGAATGCCAGCATCTGCCAAGCAGTTGGGATAAT...ACATGAGAGAATTGTGAACTTCTGTCTTGTTTGAGCCATGGTTTCATTCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR CCA 90 bp AAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGAAGCCCAGCAATGTACTGTGGCAAGGGTaGAATAGTGAAGAATTATCC +
Preference number: 4 (lower is better)
Translates to: KECEYHSLYEFLPRKPSNVLWQG*NSEELS
Trigger: GGATAATTCTTCACTATTCCACCCTTGCCACAGTAC...ATTGCTGGGCTTCCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp CTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGCTATTAACACAATGGTaGACCACGAAGAACGCACTG +
Preference number: 4 (lower is better)
Translates to: LLNPYGGCKQFLNAHSFKLLTQW*TTKNAL
Trigger: CAGTGCGTTCTTCGTGGTCCACCATTGTGTTAATAG...CTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp TTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATCCCTATTAACACAATaGTGGACCACGAAGAACGCA +
Preference number: 4 (lower is better)
Translates to: LNPYGGCKQFLNAHSFKESLLTQ*WTTKNA
Trigger: TGCGTTCTTCGTGGTCCACCATTGTGTTAATAGGGA...TTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGGTTAATTTGCAGCCCTaGGAGGAATTTTTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: PYGGCKQFLNAHSFKECEVNLQP*EEFLKL
Trigger: AAGCTTCAAAAATTCCTCCCAGGGCTGCAAATTAAC...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp TTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATCAAAGGTAAAGAATTaGCATGGCACTGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LNPYGGCKQFLNAHSFKESKVKN*HGTELQ
Trigger: CTGCAGCTCAGTGCCATGCCAATTCTTTACCTTTGA...TTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp AAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGAAGCCCAGCAATTCCCCAGAAGGCACCTaGATCTATACTACTAATAAG +
Preference number: 4 (lower is better)
Translates to: KECEYHSLYEFLPRKPSNSPEGT*IYTTNK
Trigger: CTTATTAGTAGTATAGATCCAGGTGCCTTCTGGGGA...ATTGCTGGGCTTCCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR TCA 90 bp TTGGGCTTATGGAACTTTAAGGTGATTTATGATGAATTCAAACCTCCACACAACATGTTCTGGGCCATCTaGAGTCACCTTTGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: LGLWNFKVIYDEFKPPHNMFWAI*SHLCCL
Trigger: TAAACAACAAAGGTGACTTCAGATGGCCCAGAACAT...GTTGTGTGGAGGTTTGAATTCATCATAAATCACCTTAAAGTTCCATAAGCCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508133.5
CDS-3UTR TCA 90 bp TTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATCTGAATGGCCAAGTTaGGGCCATAAGATTTTTGCT +
Preference number: 4 (lower is better)
Translates to: LNPYGGCKQFLNAHSFKESEWPS*GHKIFA
Trigger: AGCAAAAATCTTATGGCCTCAACTTGGCCATTCAGA...TTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp CAAATTCTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCCACTTAAAGCTCAGCTaGTTATCCAGGTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QILLNPYGGCKQFLNAHSHLKLS*LSRFPS
Trigger: AGAGGGAAACCTGGATAAGCAGCTGAGCTTTAAGTG...GCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAGAATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp TTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAACTTAATGTTCGCTGCTaGAGTTATGCCGCAAACAAT +
Preference number: 4 (lower is better)
Translates to: LNPYGGCKQFLNAHSFKELNVRC*SYAANN
Trigger: ATTGTTTGCGGCATAACTGCAGCAGCGAACATTAAG...TTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp GGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATCACAGTATTCTTAATGTTCGCTaGTGCAGTTATGCCGCAAAC +
Preference number: 4 (lower is better)
Translates to: GCKQFLNAHSFKECEYHSILNVR*CSYAAN
Trigger: GTTTGCGGCATAACTGCAGCAGCGAACATTAAGAAT...ACTGTGATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp AGTGCTCACACTAAACCAGAACACCTAACACCTGTTGGATCAGTTATTATGCAGAAAAGATACTCAGTCTaGAATTCCAAAGACCGTAAT +
Preference number: 4 (lower is better)
Translates to: SAHTKPEHLTPVGSVIMQKRYSV*NSKDRN
Trigger: ATTACGGTCTTTGGAATTCCAGACTGAGTATCTTTT...CTGCATAATAACTGATCCAACAGGTGTTAGGTGTTCTGGTTTAGTGTGAGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR CCA 90 bp CTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGTTAACAGGGATGTGGTaGGTATCTACATTCACACCA +
Preference number: 4 (lower is better)
Translates to: LLNPYGGCKQFLNAHSFKLTGMW*VSTFTP
Trigger: TGGTGTGAATGTAGATACCCACCACATCCCTGTTAA...CTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp AAAGAGAATGAAACCATGGCTCAAACAAGACAGAAGTTCACAATTCTCTCATGTGTACTGTGGCAAGGGTaGAATAGTGAAGAATTATCC +
Preference number: 4 (lower is better)
Translates to: KENETMAQTRQKFTILSCVLWQG*NSEELS
Trigger: GGATAATTCTTCACTATTCCACCCTTGCCACAGTAC...ACATGAGAGAATTGTGAACTTCTGTCTTGTTTGAGCCATGGTTTCATTCTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR CCA 90 bp CAAATTCTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCCTACCCATAGTACTGTaGCAAGGGTGGAATAGTGAA +
Preference number: 4 (lower is better)
Translates to: QILLNPYGGCKQFLNAHSLPIVL*QGWNSE
Trigger: TTCACTATTCCACCCTTGCCACAGTACTATGGGTAG...GCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAGAATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp GCTCATAGCTTCAAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGTATCAAGCTGAGGGGTaGAGTTCAAAGGTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: AHSFKECEYHSLYEFLPRYQAEG*SSKVKN
Trigger: ATTCTTTACCTTTGAACTCCACCCCTCAGCTTGATA...CCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTTGAAGCTATGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR TCA 90 bp TTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAAGTTCATCAGCCAACATaGTGTTACTTGCAATGTCAA +
Preference number: 4 (lower is better)
Translates to: LNPYGGCKQFLNAHSFKEVHQPT*CYLQCQ
Trigger: TTGACATTGCAAGTAACATCATGTTGGCTGATGAAC...TTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR TCA 90 bp CAAATTCTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCCATTGCGGAATGCAATaGGTTGAAGCTTGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: QILLNPYGGCKQFLNAHSHCGMQ*VEACKE
Trigger: CTCTTTACAAGCTTCAACTCATTGCATTCCGCAATG...GCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAGAATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR TCA 90 bp CTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGCAGGTTAGGAAAATATaGAAGCACAAGTTCACAAGC +
Preference number: 4 (lower is better)
Translates to: LLNPYGGCKQFLNAHSFKQVRKI*KHKFTS
Trigger: GCTTGTGAACTTGTGCTTTCATATTTTCCTAACCTG...CTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR TCA 90 bp TATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATACTTTTGTTTGTGCATaGAGACTCCGCACTGCTATT +
Preference number: 4 (lower is better)
Translates to: YGGCKQFLNAHSFKECEYTFVCA*RLRTAI
Trigger: AATAGCAGTGCGGAGTCTTCATGCACAAACAAAAGT...ATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp TTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAACAACATGATGTTACTTaGAATGTCAACCATCACGTC +
Preference number: 4 (lower is better)
Translates to: LNPYGGCKQFLNAHSFKEQHDVT*NVNHHV
Trigger: GACGTGATGGTTGACATTGCAAGTAACATCATGTTG...TTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp TTGGGCTTATGGAACTTTAAGGTGATTTATGATGAATTCAAACCTCCACACAACCAACATGATGTTACTTaGAATGTCAACCATCACGTC +
Preference number: 4 (lower is better)
Translates to: LGLWNFKVIYDEFKPPHNQHDVT*NVNHHV
Trigger: GACGTGATGGTTGACATTGCAAGTAACATCATGTTG...GTTGTGTGGAGGTTTGAATTCATCATAAATCACCTTAAAGTTCCATAAGCCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508133.5
CDS-3UTR GCA 90 bp CTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGCTTTCCATTGCGGAATaGAATGAGTTGAAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: LLNPYGGCKQFLNAHSFKLSIAE*NELKLV
Trigger: TACAAGCTTCAACTCATTGCATTCCGCAATGGAAAG...CTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp CTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGTCTAAAGGCGCCACGTaGATTTTAATATCATTGTCC +
Preference number: 4 (lower is better)
Translates to: LLNPYGGCKQFLNAHSFKSKGAT*ILISLS
Trigger: GGACAATGATATTAAAATGCACGTGGCGCCTTTAGA...CTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR GCA 90 bp GGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATCACAGTGTTTATATGAATTTCTaGCTAGGAAGCCCAGCAATG +
Preference number: 4 (lower is better)
Translates to: GCKQFLNAHSFKECEYHSVYMNF*LGSPAM
Trigger: CATTGCTGGGCTTCCTAGGCAGAAATTCATATAAAC...ACTGTGATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp CAAATTCTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTTCGCCATTTTCATTaGCTGCCAATCTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: QILLNPYGGCKQFLNAHSFRHFH*LPISVA
Trigger: AGCAACAGAGATTGGCAGCCAATGAAAATGGCGAAA...GCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAGAATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR TCA 90 bp CAAATTCTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCATCAGCCAAATTTGTTaGATTTCCAGTGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: QILLNPYGGCKQFLNAHSISQIC*ISSGWK
Trigger: TTTCCAGCCACTGGAAATTCAACAAATTTGGCTGAT...GCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAGAATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR TCA 90 bp CTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGAGTGATATTTTCATCTaGATAGAGTATATGGCACCC +
Preference number: 4 (lower is better)
Translates to: LLNPYGGCKQFLNAHSFKSDIFI*IEYMAP
Trigger: GGGTGCCATATACTCTATTCAGATGAAAATATCACT...CTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp GGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATCACAGTTTGTTGAATTTCCAGTaGCTGGAAAAAGCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: GCKQFLNAHSFKECEYHSLLNFQ*LEKAFH
Trigger: ATGGAAAGCTTTTTCCAGCCACTGGAAATTCAACAA...ACTGTGATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp TATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATACATTAACAGGGATGTaGTGGGTATCTACATTCACA +
Preference number: 4 (lower is better)
Translates to: YGGCKQFLNAHSFKECEYTLTGM*WVSTFT
Trigger: TGTGAATGTAGATACCCACCACATCCCTGTTAATGT...ATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp TTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAAAATTTCTGCTACTTTTaGGAAGTGTGCTACAAGCAT +
Preference number: 4 (lower is better)
Translates to: LNPYGGCKQFLNAHSFKENFCYF*EVCYKH
Trigger: ATGCTTGTAGCACACTTCCCAAAAGTAGCAGAAATT...TTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CCA 90 bp TATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATAAAAGATACTCAGTCTaGAATTCCAAAGACCGTAAT +
Preference number: 4 (lower is better)
Translates to: YGGCKQFLNAHSFKECEYKRYSV*NSKDRN
Trigger: ATTACGGTCTTTGGAATTCCAGACTGAGTATCTTTT...ATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS CCA 90 bp CTGCGGCTGCGCTGGGCCTCTAGGGAGCCGGGGGTCACGGCCGCATaGGTCCCAGCGCCGCTCTACCGCCCGGCGCGAGCACCGCCTCCT +
Preference number: 5 (lower is better)
Translates to: LRLRWASREPGVTAA*VPAPLYRPARAPPP
Trigger: AGGAGGCGGTGCTCGCGCCGGGCGGTAGAGCGGCGCTGGGACCCATGCGGCCGTGACCCCCGGCTCCCTAGAGGCCCAGCGCAGCCGCAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS GCA 90 bp GCCATGATTGTAAGTTTCCCGAGGGCTCCCCAGAAGCCAAGCAGATaGCAGCGTCATGACTGCTGTACAGCTAGGGTGCGTTTGGCCGAC +
Preference number: 5 (lower is better)
Translates to: AMIVSFPRAPQKPSR*QRHDCCTARVRLAD
Trigger: GTCGGCCAAACGCACCCTAGCTGTACAGCAGTCATGACGCTGGCATCTGCTTGGCTTCTGGGGAGCCCTCGGGAAACTTACAATCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR CAA 90 bp CACCTGGTCTCAGGGTTGACTTCTCCACTAGGCTTGGCAGGCGCAGTGCCAAAGCACCTGGTCTCAGGGTaGACTTCTCCACTAGGCTTG +
Preference number: 5 (lower is better)
Translates to: HLVSGLTSPLGLAGAVPKHLVSG*TSPLGL
Trigger: CAAGCCTAGTGGAGAAGTCAACCCTGAGACCAGGTG...CTTTGGCACTGCGCCTGCCAAGCCTAGTGGAGAAGTCAACCCTGAGACCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS GCA 90 bp TGGATCCCGCCTCCCATAATCCGAAAGTCCTGTACGATCAGAGGCTaGCACTTTCTGGAACACGGTACAGGTCATCCCCGTGAAGCCAGT +
Preference number: 5 (lower is better)
Translates to: WIPPPIIRKSCTIRG*HFLEHGTGHPREAS
Trigger: ACTGGCTTCACGGGGATGACCTGTACCGTGTTCCAGAAAGTGGCAGCCTCTGATCGTACAGGACTTTCGGATTATGGGAGGCGGGATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000502482.1
ENST00000508133.5
CDS CCA 90 bp AGGGTGGCCCCTCTCCAGATAAACCTTGCAGTGGCTCTGAGGTGCTaGGAGGTGGGATCAAGTTTGGCCCAACTACAAACGTCAGAAATG +
Preference number: 5 (lower is better)
Translates to: RVAPLQINLAVALRC*EVGSSLAQLQTSEM
Trigger: CATTTCTGACGTTTGTAGTTGGGCCAAACTTGATCCCACCTCCCAGCACCTCAGAGCCACTGCAAGGTTTATCTGGAGAGGGGCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499527.6
CDS GCA 90 bp CTTCCAGCCTCCTTGTCCGTTCAGCAAATCGAAATCCCACCGGGCTaGAACAGCATCTGCTCCATGTGCAATTCGACGCAGTGTCACATT +
Preference number: 5 (lower is better)
Translates to: LPASLSVQQIEIPPG*NSICSMCNSTQCHI
Trigger: AATGTGACACTGCGTCGAATTGCACATGGAGCAGATGCTGTTGCAGCCCGGTGGGATTTCGATTTGCTGAACGGACAAGGAGGCTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000506155.1
CDS GCA 90 bp AGAAGCCAAGCAGATGCCAGCGTCATGACTGCTGTACAGCTAGGGTaGGTTTGGCCGACTGCCGTAATTCTTAATGTTCGCTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: RSQADASVMTAVQLG*VWPTAVILNVRCCS
Trigger: ACTGCAGCAGCGAACATTAAGAATTACGGCAGTCGGCCAAACGCACCCTAGCTGTACAGCAGTCATGACGCTGGCATCTGCTTGGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS CCA 90 bp CAAGCAGATGCCAGCGTCATGACTGCTGTACAGCTAGGGTGCGTTTaGCCGACTGCCGTAATTCTTAATGTTCGCTGCTGCAGTTATGCC +
Preference number: 5 (lower is better)
Translates to: QADASVMTAVQLGCV*PTAVILNVRCCSYA
Trigger: GGCATAACTGCAGCAGCGAACATTAAGAATTACGGCAGTCGGCCAAACGCACCCTAGCTGTACAGCAGTCATGACGCTGGCATCTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR CAA 90 bp AGTGCTCACACTAAACCAGAACACCTAACACCTGTTGGATCAGTTATTATGCAGCGCGGACATGCTCCTTaGTCCGCTGCGGCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: SAHTKPEHLTPVGSVIMQRGHAP*SAAAAL
Trigger: CAGCGCAGCCGCAGCGGACAAAGGAGCATGTCCGCG...CTGCATAATAACTGATCCAACAGGTGTTAGGTGTTCTGGTTTAGTGTGAGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS TCA 90 bp CTTCCACGCTCGTTGGGACATCGTAGGCATATTCTCTCAGGACTGTaGGTCGGCTTGCCCGGTGTCCTTTACTTCTGTTTTTATGGTGGC +
Preference number: 5 (lower is better)
Translates to: LPRSLGHRRHILSGL*VGLPGVLYFCFYGG
Trigger: GCCACCATAAAAACAGAAGTAAAGGACACCGGGCAAGCCGACTCACAGTCCTGAGAGAATATGCCTACGATGTCCCAACGAGCGTGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS GCA 90 bp CAGCAAATCGAAATCCCACCGGGCTGCAACAGCATCTGCTCCATGTaGAATTCGACGCAGTGTCACATTAACAGGGATGTGGTGGGTATC +
Preference number: 5 (lower is better)
Translates to: QQIEIPPGCNSICSM*NSTQCHINRDVVGI
Trigger: GATACCCACCACATCCCTGTTAATGTGACACTGCGTCGAATTGCACATGGAGCAGATGCTGTTGCAGCCCGGTGGGATTTCGATTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000506155.1
CDS GCA 90 bp TTGTCCGTTCAGCAAATCGAAATCCCACCGGGCTGCAACAGCATCTaGTCCATGTGCAATTCGACGCAGTGTCACATTAACAGGGATGTG +
Preference number: 5 (lower is better)
Translates to: LSVQQIEIPPGCNSI*SMCNSTQCHINRDV
Trigger: CACATCCCTGTTAATGTGACACTGCGTCGAATTGCACATGGAGCAGATGCTGTTGCAGCCCGGTGGGATTTCGATTTGCTGAACGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000506155.1
CDS GCA 90 bp CTAGGGTGCGTTTGGCCGACTGCCGTAATTCTTAATGTTCGCTGCTaGAGTTATGCCGCAAACAATGATGGGGATACCACCACCAATCAG +
Preference number: 5 (lower is better)
Translates to: LGCVWPTAVILNVRC*SYAANNDGDTTTNQ
Trigger: CTGATTGGTGGTGGTATCCCCATCATTGTTTGCGGCATAACTGCAGCAGCGAACATTAAGAATTACGGCAGTCGGCCAAACGCACCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS GCA 90 bp CAGCTAGGGTGCGTTTGGCCGACTGCCGTAATTCTTAATGTTCGCTaGTGCAGTTATGCCGCAAACAATGATGGGGATACCACCACCAAT +
Preference number: 5 (lower is better)
Translates to: QLGCVWPTAVILNVR*CSYAANNDGDTTTN
Trigger: ATTGGTGGTGGTATCCCCATCATTGTTTGCGGCATAACTGCAGCAGCGAACATTAAGAATTACGGCAGTCGGCCAAACGCACCCTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR CAA 90 bp CACCTGGTCTCAGGGTTGACTTCTCCACTAGGCTTGGCAGGCGCAGTGCCAAAGTATTGGGTGAATATGTaGAATAAACGTGAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: HLVSGLTSPLGLAGAVPKYWVNM*NKRELH
Trigger: GTGGAGCTCACGTTTATTCAACATATTCACCCAATA...CTTTGGCACTGCGCCTGCCAAGCCTAGTGGAGAAGTCAACCCTGAGACCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS GCA 90 bp ATAGGGTGCGTTTGGCCGACTGCCGTAATTCTTAATGTTCGCTGCTaGAGTTATGCCGCAAACAATGATGGGGATACCACCACCAATCAG +
Preference number: 5 (lower is better)
Translates to: IGCVWPTAVILNVRC*SYAANNDGDTTTNQ
Trigger: CTGATTGGTGGTGGTATCCCCATCATTGTTTGCGGCATAACTGCAGCAGCGAACATTAAGAATTACGGCAGTCGGCCAAACGCACCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS GCA 90 bp GCAATAGGGTGCGTTTGGCCGACTGCCGTAATTCTTAATGTTCGCTaGTGCAGTTATGCCGCAAACAATGATGGGGATACCACCACCAAT +
Preference number: 5 (lower is better)
Translates to: AIGCVWPTAVILNVR*CSYAANNDGDTTTN
Trigger: ATTGGTGGTGGTATCCCCATCATTGTTTGCGGCATAACTGCAGCAGCGAACATTAAGAATTACGGCAGTCGGCCAAACGCACCCTATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS-3UTR CAA 90 bp TTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAACGCGGACATGCTCCTTaGTCCGCTGCGGCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: LNPYGGCKQFLNAHSFKERGHAP*SAAAAL
Trigger: CAGCGCAGCCGCAGCGGACAAAGGAGCATGTCCGCG...TTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS TCA 90 bp CAGCCGCCTGCAAGTTTGTTAATTTGCAGCCCTGGGAGGAATTTTTaGAGCTTGAAGCACTTTTGTTTGTGCATGAAGACTCCGCACTGC +
Preference number: 5 (lower is better)
Translates to: QPPASLLICSPGRNF*SLKHFCLCMKTPHC
Trigger: GCAGTGCGGAGTCTTCATGCACAAACAAAAGTGCTTCAAGCTTCAAAAATTCCTCCCAGGGCTGCAAATTAACAAACTTGCAGGCGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS-3UTR CAA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGAGCATCGCTGCTGTCTaGCTGGGGTGGGTTGTACTG +
Preference number: 5 (lower is better)
Translates to: PYGGCKQFLNAHSFKECESIAAV*LGWVVL
Trigger: CAGTACAACCCACCCCAGCAAGACAGCAGCGATGCT...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp AAACCATGGCTCAAACAAGACAGAAGTTCACAATTCTCTCATGTTACAGCCCAGACAGCTAGGGTGCGTTaGGCCGACTGCCGTAATTCT +
Preference number: 5 (lower is better)
Translates to: KPWLKQDRSSQFSHVTAQTARVR*ADCRNS
Trigger: AGAATTACGGCAGTCGGCCAAACGCACCCTAGCTGT...CTGGGCTGTAACATGAGAGAATTGTGAACTTCTGTCTTGTTTGAGCCATGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS TCA 90 bp ATCTATGGACGATGCTTAGGAACGCTACTTGGAGCTCTCGCCTCTTaGATTTCAACGCCATTAAGGAAGTCCTTGATGTCTACTGCTACC +
Preference number: 5 (lower is better)
Translates to: IYGRCLGTLLGALAS*ISTPLRKSLMSTAT
Trigger: GGTAGCAGTAGACATCAAGGACTTCCTTAATGGCGTTGAAATTCAAGAGGCGAGAGCTCCAAGTAGCGTTCCTAAGCATCGTCCATAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514749.5
CDS CCA 90 bp GCTCCATGTGCAATTCGACGCAGTGTCACATTAACAGGGATGTGGTaGGTATCTACATTCACACCATCTATTTTGGTGAGAATCACAGGG +
Preference number: 5 (lower is better)
Translates to: APCAIRRSVTLTGMW*VSTFTPSILVRITG
Trigger: CCCTGTGATTCTCACCAAAATAGATGGTGTGAATGTAGATACCCACCACATCCCTGTTAATGTGACACTGCGTCGAATTGCACATGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000506155.1
CDS CCA 90 bp CAAGTCATGATCCACGCAAGTCTAACATCCTCCCTATTAACACAATaGTGGACCACGAAGAACGCACTGAAGCTTAAACTTGTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: QVMIHASLTSSLLTQ*WTTKNALKLKLVAP
Trigger: TGGAGCCACAAGTTTAAGCTTCAGTGCGTTCTTCGTGGTCCACCATTGTGTTAATAGGGAGGATGTTAGACTTGCGTGGATCATGACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS CCA 90 bp TCAGACTATTATCAAGCTGAGGGGTGGAGTTCAAAGGTAAAGAATTaGCATGGCACTGAGCTGCAGCCGCCTGCAAGTTTGTTAATTTGC +
Preference number: 5 (lower is better)
Translates to: SDYYQAEGWSSKVKN*HGTELQPPASLLIC
Trigger: GCAAATTAACAAACTTGCAGGCGGCTGCAGCTCAGTGCCATGCCAATTCTTTACCTTTGAACTCCACCCCTCAGCTTGATAATAGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS CCA 90 bp CATTGTCCATTGAATGTTCTGTCAGACTATTATCAAGCTGAGGGGTaGAGTTCAAAGGTAAAGAATTGGCATGGCACTGAGCTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: HCPLNVLSDYYQAEG*SSKVKNWHGTELQP
Trigger: CGGCTGCAGCTCAGTGCCATGCCAATTCTTTACCTTTGAACTCCACCCCTCAGCTTGATAATAGTCTGACAGAACATTCAATGGACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS-3UTR CAA 90 bp AAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGAAGCCCAGCAATGACTCCGCACTGCTATaGGGGCATTTGGGTGCCTCT +
Preference number: 5 (lower is better)
Translates to: KECEYHSLYEFLPRKPSNDSALL*GHLGAS
Trigger: AGAGGCACCCAAATGCCCCAATAGCAGTGCGGAGTC...ATTGCTGGGCTTCCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS CCA 90 bp GTCATGATCCACGCAAGTCTAACATCCTCCCTATTAACACAATGGTaGACCACGAAGAACGCACTGAAGCTTAAACTTGTGGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: VMIHASLTSSLLTQW*TTKNALKLKLVAPK
Trigger: TTTTGGAGCCACAAGTTTAAGCTTCAGTGCGTTCTTCGTGGTCCACCATTGTGTTAATAGGGAGGATGTTAGACTTGCGTGGATCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS CCA 90 bp ATAAAAGCGCCACATGATCTATGGACGATGCTTAGGAACGCTACTTaGAGCTCTCGCCTCTTGAATTTCAACGCCATTAAGGAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: IKAPHDLWTMLRNAT*SSRLLNFNAIKEVL
Trigger: AAGGACTTCCTTAATGGCGTTGAAATTCAAGAGGCGAGAGCTCCAAGTAGCGTTCCTAAGCATCGTCCATAGATCATGTGGCGCTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514749.5
CDS-3UTR CAA 90 bp TATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATGGCTGCCAATCTCTGTaGCTCCTCCGTGGGCTCCTT +
Preference number: 5 (lower is better)
Translates to: YGGCKQFLNAHSFKECEYGCQSL*LLRGLL
Trigger: AAGGAGCCCACGGAGGAGCAACAGAGATTGGCAGCC...ATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS CCA 90 bp TCTGCTCCATGTGCAATTCGACGCAGTGTCACATTAACAGGGATGTaGTGGGTATCTACATTCACACCATCTATTTTGGTGAGAATCACA +
Preference number: 5 (lower is better)
Translates to: SAPCAIRRSVTLTGM*WVSTFTPSILVRIT
Trigger: TGTGATTCTCACCAAAATAGATGGTGTGAATGTAGATACCCACCACATCCCTGTTAATGTGACACTGCGTCGAATTGCACATGGAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000506155.1
CDS-3UTR CAA 90 bp AAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGAAGCCCAGCAATAGCAATAGGGTGCGTTaGGCCGACTGCCGTAATTCT +
Preference number: 5 (lower is better)
Translates to: KECEYHSLYEFLPRKPSNSNRVR*ADCRNS
Trigger: AGAATTACGGCAGTCGGCCAAACGCACCCTATTGCT...ATTGCTGGGCTTCCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp TTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAACTGCTATTGGGGCATTaGGGTGCCTCTCCATTCGTC +
Preference number: 5 (lower is better)
Translates to: LNPYGGCKQFLNAHSFKELLLGH*GASPFV
Trigger: GACGAATGGAGAGGCACCCAAATGCCCCAATAGCAG...TTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp CTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGCAGCCGCCTGCAAGTTaGTTAATTTGCAGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: LLNPYGGCKQFLNAHSFKQPPAS*LICSPG
Trigger: CCCAGGGCTGCAAATTAACAAACTTGCAGGCGGCTG...CTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS TCA 90 bp TCCAGAGTTTATTTTAATGAGAACCAATCTGCAGCAAACACTTGGTaGCCTGAAAGCCCAAATCTTCTTTTGCAGGAGAAAGCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: SRVYFNENQSAANTW*PESPNLLLQEKARV
Trigger: CACCCTGGCTTTCTCCTGCAAAAGAAGATTTGGGCTTTCAGGTCACCAAGTGTTTGCTGCAGATTGGTTCTCATTAAAATAAACTCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499527.6
CDS-3UTR CAA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGAATTATCCCAACTGCTaGGCAGATGCTGGCATTCCT +
Preference number: 5 (lower is better)
Translates to: PYGGCKQFLNAHSFKECENYPNC*ADAGIP
Trigger: AGGAATGCCAGCATCTGCCAAGCAGTTGGGATAATT...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS TCA 90 bp CAACTCTGTTGCCTGCTAAGGCAACACTGTGTTCTAATAGACATGTaGCAGGGAATCACAATCCTCAAATACACAAACCAACAATTGGCT +
Preference number: 5 (lower is better)
Translates to: QLCCLLRQHCVLIDM*QGITILKYTNQQLA
Trigger: AGCCAATTGTTGGTTTGTGTATTTGAGGATTGTGATTCCCTGTCACATGTCTATTAGAACACAGTGTTGCCTTAGCAGGCAACAGAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499527.6
CDS-3UTR CAA 90 bp AATGAAACCATGGCTCAAACAAGACAGAAGTTCACAATTCTCTCATGTTACAGCAATTATCCCAACTGCTaGGCAGATGCTGGCATTCCT +
Preference number: 5 (lower is better)
Translates to: NETMAQTRQKFTILSCYSNYPNC*ADAGIP
Trigger: AGGAATGCCAGCATCTGCCAAGCAGTTGGGATAATT...GCTGTAACATGAGAGAATTGTGAACTTCTGTCTTGTTTGAGCCATGGTTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS-3UTR CAA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTCCTTAAGCTCATATTaGCGCTCAGGGTGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: PYGGCKQFLNAHSFKECESLSSY*RSGCLF
Trigger: GAAAAGACACCCTGAGCGCAAATATGAGCTTAAGGA...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTTGAAGCACTTTTGTTaGTGCATGAAGACTCCGCAC +
Preference number: 5 (lower is better)
Translates to: PYGGCKQFLNAHSFKECELKHFC*CMKTPH
Trigger: GTGCGGAGTCTTCATGCACAAACAAAAGTGCTTCAA...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTTTTATGGTGGCGGCTaGAGTGCACATTTGTTCGAA +
Preference number: 5 (lower is better)
Translates to: PYGGCKQFLNAHSFKECEFYGGG*SAHLFE
Trigger: TTCGAACAAATGTGCACTCAAGCCGCCACCATAAAA...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp CAAATTCTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCGAGTGTCCTTCGTTATaGCCCAGCCGGCTTTTAGGT +
Preference number: 5 (lower is better)
Translates to: QILLNPYGGCKQFLNAHSECPSL*PSRLLG
Trigger: ACCTAAAAGCCGGCTGGGCAATAACGAAGGACACTC...GCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAGAATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp GGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATCACAGTAATCCAGTCCTAACATaGCCAGTGCTATCGGTACCG +
Preference number: 5 (lower is better)
Translates to: GCKQFLNAHSFKECEYHSNPVLT*PVLSVP
Trigger: CGGTACCGATAGCACTGGCAATGTTAGGACTGGATT...ACTGTGATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS GCA 90 bp CGCCTCTTGAATTTCAACGCCATTAAGGAAGTCCTTGATGTCTACTaGTACCATTTAACACAGTACCAAGTTTTAGTTTGGTACATCGCT +
Preference number: 5 (lower is better)
Translates to: RLLNFNAIKEVLDVY*YHLTQYQVLVWYIA
Trigger: AGCGATGTACCAAACTAAAACTTGGTACTGTGTTAAATGGTAGCAGTAGACATCAAGGACTTCCTTAATGGCGTTGAAATTCAAGAGGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514749.5
CDS-3UTR CAA 90 bp GCTCATAGCTTCAAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGGCGGAATGCAATGAGTaGAAGCTTGTAAAGAGAGTC +
Preference number: 5 (lower is better)
Translates to: AHSFKECEYHSLYEFLPRAECNE*KLVKRV
Trigger: GACTCTCTTTACAAGCTTCAACTCATTGCATTCCGC...CCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTTGAAGCTATGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGCATCATCAGCCAAATTaGTTGAATTTCCAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: PYGGCKQFLNAHSFKECEHHQPN*LNFQWL
Trigger: CAGCCACTGGAAATTCAACAAATTTGGCTGATGATG...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTGCAAGTTTGTTAATTaGCAGCCCTGGGAGGAATTT +
Preference number: 5 (lower is better)
Translates to: PYGGCKQFLNAHSFKECECKFVN*QPWEEF
Trigger: AAATTCCTCCCAGGGCTGCAAATTAACAAACTTGCA...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp TTGAGTGCTCACACTAAACCAGAACACCTAACACCTGTTGGATCAGTTATTATGTTGTGCCTCCTCTATTaGCTTCAATACAGTGTAGTC +
Preference number: 5 (lower is better)
Translates to: LSAHTKPEHLTPVGSVIMLCLLY*LQYSVV
Trigger: GACTACACTGTATTGAAGCAAATAGAGGAGGCACAA...CATAATAACTGATCCAACAGGTGTTAGGTGTTCTGGTTTAGTGTGAGCACTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS GCA 90 bp CTCATAGCTTCAAGGAATGTGAGTATCACAGTTTATATGAATTTCTaGCTAGGAAGCCCAGCAATGTTACACAGTAGTTTCGTGTTTCCA +
Preference number: 5 (lower is better)
Translates to: LIASRNVSITVYMNF*LGSPAMLHSSFVFP
Trigger: TGGAAACACGAAACTACTGTGTAACATTGCTGGGCTTCCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTTGAAGCTATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334304.10
ENST00000499527.6
CDS-3UTR CAA 90 bp GCTCATAGCTTCAAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGCATCAGCCAAATTTGTaGAATTTCCAGTGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: AHSFKECEYHSLYEFLPRHQPNL*NFQWLE
Trigger: TTCCAGCCACTGGAAATTCAACAAATTTGGCTGATG...CCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTTGAAGCTATGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp TTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAAAGCATGTGCCAGCTCTaGAGGCTGATTCTAATCAAA +
Preference number: 5 (lower is better)
Translates to: LNPYGGCKQFLNAHSFKESMCQL*RLILIK
Trigger: TTTGATTAGAATCAGCCTCAAGAGCTGGCACATGCT...TTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS CCA 90 bp AGAAAATTATCAATCGCCACCTCTAGGGGTTTCGTAGGAATTGAATaGACACAATTCATGGGATATAATAGGTGCTCAGTAAGTATAGGA +
Preference number: 5 (lower is better)
Translates to: RKLSIATSRGFVGIE*TQFMGYNRCSVSIG
Trigger: TCCTATACTTACTGAGCACCTATTATATCCCATGAATTGTGTCCATTCAATTCCTACGAAACCCCTAGAGGTGGCGATTGATAATTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499527.6
CDS-3UTR CAA 90 bp TTGAGTGCTCACACTAAACCAGAACACCTAACACCTGTTGGATCAGTTATTATGAATGTATTTGAAACATaGCACTTAAAGCTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LSAHTKPEHLTPVGSVIMNVFET*HLKLSC
Trigger: GCAGCTGAGCTTTAAGTGCAATGTTTCAAATACATT...CATAATAACTGATCCAACAGGTGTTAGGTGTTCTGGTTTAGTGTGAGCACTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502482.1
CDS-3UTR CAA 90 bp TTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAAAAGCTTGAAGCACTTTaGTTTGTGCATGAAGACTCC +
Preference number: 5 (lower is better)
Translates to: LNPYGGCKQFLNAHSFKEKLEAL*FVHEDS
Trigger: GGAGTCTTCATGCACAAACAAAAGTGCTTCAAGCTT...TTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp AAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGAAGCCCAGCAATAAATTTCTGCTACTTTaGGGAAGTGTGCTACAAGCA +
Preference number: 5 (lower is better)
Translates to: KECEYHSLYEFLPRKPSNKFLLL*GSVLQA
Trigger: TGCTTGTAGCACACTTCCCAAAAGTAGCAGAAATTT...ATTGCTGGGCTTCCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp CCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTTATTCCAAATTCTTTaGAATCCCTATGGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: PYGGCKQFLNAHSFKECELFQIL*NPYGGC
Trigger: ACAGCCACCATAGGGATTCAAAAGAATTTGGAATAA...CTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp TTGGGCTTATGGAACTTTAAGGTGATTTATGATGAATTCAAACCTCCACACAACTATTGGGTGAATATGTaGAATAAACGTGAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: LGLWNFKVIYDEFKPPHNYWVNM*NKRELH
Trigger: GTGGAGCTCACGTTTATTCAACATATTCACCCAATA...GTTGTGTGGAGGTTTGAATTCATCATAAATCACCTTAAAGTTCCATAAGCCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508133.5
CDS-3UTR CAA 90 bp TATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATTTCACACCATCTATTTaGGTGAGAATCACAGGGGTA +
Preference number: 5 (lower is better)
Translates to: YGGCKQFLNAHSFKECEYFTPSI*VRITGV
Trigger: TACCCCTGTGATTCTCACCAAAATAGATGGTGTGAA...ATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp TATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATGGCTTGAGTGCACATTaGTTCGAAACTGAACTTCTA +
Preference number: 5 (lower is better)
Translates to: YGGCKQFLNAHSFKECEYGLSAH*FETELL
Trigger: TAGAAGTTCAGTTTCGAACAAATGTGCACTCAAGCC...ATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp GCTCATAGCTTCAAGGAATGTGAGTATCACAGTTTATATGAATTTCTGCCTAGGTGTCCTGTTGGTGCTTaGACAACTAAAACAATGTTT +
Preference number: 5 (lower is better)
Translates to: AHSFKECEYHSLYEFLPRCPVGA*TTKTMF
Trigger: AAACATTGTTTTAGTTGTCAAAGCACCAACAGGACA...CCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTTGAAGCTATGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp TATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAATGTGAGTATTATTGGGTGAATATGTaGAATAAACGTGAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: YGGCKQFLNAHSFKECEYYWVNM*NKRELH
Trigger: GTGGAGCTCACGTTTATTCAACATATTCACCCAATA...ATACTCACATTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp TTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCTTCAAGGAAGAGGCCATAAGATTTTaGCTGATTTTCAAGTTCAAC +
Preference number: 5 (lower is better)
Translates to: LNPYGGCKQFLNAHSFKEEAIRF*LIFKFN
Trigger: GTTGAACTTGAAAATCAGCAAAAATCTTATGGCCTC...TTCCTTGAAGCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS-3UTR CAA 90 bp CAAATTCTTTTGAATCCCTATGGTGGCTGTAAACAGTTTTTAAATGCTCATAGCAATGTATTTGAAACATaGCACTTAAAGCTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QILLNPYGGCKQFLNAHSNVFET*HLKLSC
Trigger: GCAGCTGAGCTTTAAGTGCAATGTTTCAAATACATT...GCTATGAGCATTTAAAAACTGTTTACAGCCACCATAGGGATTCAAAAGAATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS CCA 72 bp CGCTGGGCCTCTAGGGAGCCGGGGGTCACGGCCGCATaGGTCCCAGCGCCGCTCTACCGCCCGGCGCGAGCA +
Preference number: 6 (lower is better)
Translates to: RWASREPGVTAA*VPAPLYRPARA
Trigger: TGCTCGCGCCGGGCGGTAGAGCGGCGCTGGGACCCATGCGGCCGTGACCCCCGGCTCCCTAGAGGCCCAGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS GCA 72 bp GTAAGTTTCCCGAGGGCTCCCCAGAAGCCAAGCAGATaGCAGCGTCATGACTGCTGTACAGCTAGGGTGCGT +
Preference number: 6 (lower is better)
Translates to: VSFPRAPQKPSR*QRHDCCTARVR
Trigger: ACGCACCCTAGCTGTACAGCAGTCATGACGCTGGCATCTGCTTGGCTTCTGGGGAGCCCTCGGGAAACTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS GCA 72 bp CACTGCACAATCCTACTGCAGGCTTTAGCTTCCCTCTaGGCCAGCCACAGGACACGTTCATCAGCCAACATG +
Preference number: 6 (lower is better)
Translates to: HCTILLQALASL*ASHRTRSSANM
Trigger: CATGTTGGCTGATGAACGTGTCCTGTGGCTGGCGCAGAGGGAAGCTAAAGCCTGCAGTAGGATTGTGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000502482.1
ENST00000508133.5
CDS CCA 72 bp GCCAGCGTCATGACTGCTGTACAGCTAGGGTGCGTTTaGCCGACTGCCGTAATTCTTAATGTTCGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: ASVMTAVQLGCV*PTAVILNVRCC
Trigger: GCAGCAGCGAACATTAAGAATTACGGCAGTCGGCCAAACGCACCCTAGCTGTACAGCAGTCATGACGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS GCA 72 bp CCTCCCATAATCCGAAAGTCCTGTACGATCAGAGGCTaGCACTTTCTGGAACACGGTACAGGTCATCCCCGT +
Preference number: 6 (lower is better)
Translates to: PPIIRKSCTIRG*HFLEHGTGHPR
Trigger: ACGGGGATGACCTGTACCGTGTTCCAGAAAGTGGCAGCCTCTGATCGTACAGGACTTTCGGATTATGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000502482.1
ENST00000508133.5
CDS GCA 72 bp TCCTTGTCCGTTCAGCAAATCGAAATCCCACCGGGCTaGAACAGCATCTGCTCCATGTGCAATTCGACGCAG +
Preference number: 6 (lower is better)
Translates to: SLSVQQIEIPPG*NSICSMCNSTQ
Trigger: CTGCGTCGAATTGCACATGGAGCAGATGCTGTTGCAGCCCGGTGGGATTTCGATTTGCTGAACGGACAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000506155.1
CDS GCA 72 bp GCAGATGCCAGCGTCATGACTGCTGTACAGCTAGGGTaGGTTTGGCCGACTGCCGTAATTCTTAATGTTCGC +
Preference number: 6 (lower is better)
Translates to: ADASVMTAVQLG*VWPTAVILNVR
Trigger: GCGAACATTAAGAATTACGGCAGTCGGCCAAACGCACCCTAGCTGTACAGCAGTCATGACGCTGGCATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511051.5
CDS CCA 72 bp TCCGAAAGTCCTGTACGATCAGAGGCTGCCACTTTCTaGAACACGGTACAGGTCATCCCCGTGAAGCCAGTA +
Preference number: 6 (lower is better)
Translates to: SESPVRSEAATF*NTVQVIPVKPV
Trigger: TACTGGCTTCACGGGGATGACCTGTACCGTGTTCCAGAAAGTGGCAGCCTCTGATCGTACAGGACTTTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000502482.1
ENST00000508133.5
CDS CCA 72 bp CCTCTCCAGATAAACCTTGCAGTGGCTCTGAGGTGCTaGGAGGTGGGATCAAGTTTGGCCCAACTACAAACG +
Preference number: 6 (lower is better)
Translates to: PLQINLAVALRC*EVGSSLAQLQT
Trigger: CGTTTGTAGTTGGGCCAAACTTGATCCCACCTCCCAGCACCTCAGAGCCACTGCAAGGTTTATCTGGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499527.6
CDS GCA 72 bp GAAATCCCACCGGGCTGCAACAGCATCTGCTCCATGTaGAATTCGACGCAGTGTCACATTAACAGGGATGTG +
Preference number: 6 (lower is better)
Translates to: EIPPGCNSICSM*NSTQCHINRDV
Trigger: CACATCCCTGTTAATGTGACACTGCGTCGAATTGCACATGGAGCAGATGCTGTTGCAGCCCGGTGGGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000506155.1
CDS CAA 72 bp ACTTTTGGGAAGTGTGCTACAAGCATCGCTGCTGTCTaGCTGGGGTGGGTTGTACTGTCTCTCTCTGTAGGC +
Preference number: 6 (lower is better)
Translates to: TFGKCATSIAAV*LGWVVLSLSVG
Trigger: GCCTACAGAGAGAGACAGTACAACCCACCCCAGCAAGACAGCAGCGATGCTTGTAGCACACTTCCCAAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS GCA 72 bp CAGCAAATCGAAATCCCACCGGGCTGCAACAGCATCTaGTCCATGTGCAATTCGACGCAGTGTCACATTAAC +
Preference number: 6 (lower is better)
Translates to: QQIEIPPGCNSI*SMCNSTQCHIN
Trigger: GTTAATGTGACACTGCGTCGAATTGCACATGGAGCAGATGCTGTTGCAGCCCGGTGGGATTTCGATTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000506155.1
CDS GCA 72 bp TTCTGCTACTTTTGGGAAGTGTGCTACAAGCATCGCTaGTGTCTTGCTGGGGTGGGTTGTACTGTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: FCYFWEVCYKHR*CLAGVGCTVSL
Trigger: GAGAGAGACAGTACAACCCACCCCAGCAAGACAGCAGCGATGCTTGTAGCACACTTCCCAAAAGTAGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS GCA 72 bp GAGGCCTCCTTAGAAGCCGAGCAGATGCCAGCTCCATaGTTCCTGTACAGCAATCTTTCAAGGAGACTTAAC +
Preference number: 6 (lower is better)
Translates to: EASLEAEQMPAP*FLYSNLSRRLN
Trigger: GTTAAGTCTCCTTGAAAGATTGCTGTACAGGAAGCATGGAGCTGGCATCTGCTCGGCTTCTAAGGAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506346.1
CDS CCA 72 bp ATCCCAACTGCTTGGCAGATGCTGGCATTCCTAGTCTaGGTTATTCCTCCCACAAAGACCACACAGGTTAGG +
Preference number: 6 (lower is better)
Translates to: IPTAWQMLAFLV*VIPPTKTTQVR
Trigger: CCTAACCTGTGTGGTCTTTGTGGGAGGAATAACCCAGACTAGGAATGCCAGCATCTGCCAAGCAGTTGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000511051.5
CDS CAA 90 bp GTCGGCTTGCCCGGTGTCCTTTACTTCTGTTTTTATGGTGGCGGCTaGAGTGCACATTTGTTCGAAACTGAACTTCTAAAGGCGCCACGT +
Preference number: 6 (lower is better)
Translates to: VGLPGVLYFCFYGGG*SAHLFETELLKAPR
Trigger: ACGTGGCGCCTTTAGAAGTTCAGTTTCGAACAAATGTGCACTCAAGCCGCCACCATAAAAACAGAAGTAAAGGACACCGGGCAAGCCGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS TCA 72 bp GGGGTGGAGTTCAAAGGTAAAGAATTGGCATGGCACTaGGCTGCAGCCGCCTGCAAGTTTGTTAATTTGCAG +
Preference number: 6 (lower is better)
Translates to: GVEFKGKELAWH*AAAACKFVNLQ
Trigger: CTGCAAATTAACAAACTTGCAGGCGGCTGCAGCTCAGTGCCATGCCAATTCTTTACCTTTGAACTCCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS TCA 72 bp TCGTTGGGACATCGTAGGCATATTCTCTCAGGACTGTaGGTCGGCTTGCCCGGTGTCCTTTACTTCTGTTTT +
Preference number: 6 (lower is better)
Translates to: SLGHRRHILSGL*VGLPGVLYFCF
Trigger: AAAACAGAAGTAAAGGACACCGGGCAAGCCGACTCACAGTCCTGAGAGAATATGCCTACGATGTCCCAACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS GCA 72 bp GTTTGGCCGACTGCCGTAATTCTTAATGTTCGCTGCTaGAGTTATGCCGCAAACAATGATGGGGATACCACC +
Preference number: 6 (lower is better)
Translates to: VWPTAVILNVRC*SYAANNDGDTT
Trigger: GGTGGTATCCCCATCATTGTTTGCGGCATAACTGCAGCAGCGAACATTAAGAATTACGGCAGTCGGCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
ENST00000511051.5
CDS GCA 72 bp TGCGTTTGGCCGACTGCCGTAATTCTTAATGTTCGCTaGTGCAGTTATGCCGCAAACAATGATGGGGATACC +
Preference number: 6 (lower is better)
Translates to: CVWPTAVILNVR*CSYAANNDGDT
Trigger: GGTATCCCCATCATTGTTTGCGGCATAACTGCAGCAGCGAACATTAAGAATTACGGCAGTCGGCCAAACGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
ENST00000511051.5
CDS GCA 72 bp TTGAAGCACTTTTGTTTGTGCATGAAGACTCCGCACTaGTATTGGGGCATTTGGGTGCCTCTCCATTCGTCC +
Preference number: 6 (lower is better)
Translates to: LKHFCLCMKTPH*YWGIWVPLHSS
Trigger: GGACGAATGGAGAGGCACCCAAATGCCCCAATAGCAGTGCGGAGTCTTCATGCACAAACAAAAGTGCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS GCA 72 bp ATCGTAGGCATATTCTCTCAGGACTGTGAGTCGGCTTaGCCGGTGTCCTTTACTTCTGTTTTTATGGTGGCG +
Preference number: 6 (lower is better)
Translates to: IVGIFSQDCESA*PVSFTSVFMVA
Trigger: CGCCACCATAAAAACAGAAGTAAAGGACACCGGGCAAGCCGACTCACAGTCCTGAGAGAATATGCCTACGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS CCA 72 bp ACCACCACCAATCAGGTAAAATCTGAGCATTGGTCTTaGTGGAGGTGGTGGTTCATCAGGATCCTGGCATCT +
Preference number: 6 (lower is better)
Translates to: TTTNQVKSEHWS*WRWWFIRILAS
Trigger: AGATGCCAGGATCCTGATGAACCACCACCTCCACCAAGACCAATGCTCAGATTTTACCTGATTGGTGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
ENST00000511051.5
CDS CCA 72 bp AAAGTACATGCAGTTTACAAAAGTGATGAAGCTGGCTaGCCCATAGAAGGCTCCCAAGGAGGGTTCCCATGC +
Preference number: 6 (lower is better)
Translates to: KVHAVYKSDEAG*PIEGSQGGFPC
Trigger: GCATGGGAACCCTCCTTGGGAGCCTTCTATGGGCCAGCCAGCTTCATCACTTTTGTAAACTGCATGTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS CAA 72 bp GCACTTTTGTTTGTGCATGAAGACTCCGCACTGCTATaGGGGCATTTGGGTGCCTCTCCATTCGTCCCATTA +
Preference number: 6 (lower is better)
Translates to: ALLFVHEDSALL*GHLGASPFVPL
Trigger: TAATGGGACGAATGGAGAGGCACCCAAATGCCCCAATAGCAGTGCGGAGTCTTCATGCACAAACAAAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS CAA 90 bp CAATGTTACACAGTAGTTTCGTGTTTCCATAATCCAGTCCTAACATaGCCAGTGCTATCGGTACCGAGCAAGGGTCCCTCCTGCCCATTG +
Preference number: 6 (lower is better)
Translates to: QCYTVVSCFHNPVLT*PVLSVPSKGPSCPL
Trigger: CAATGGGCAGGAGGGACCCTTGCTCGGTACCGATAGCACTGGCAATGTTAGGACTGGATTATGGAAACACGAAACTACTGTGTAACATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334304.10
ENST00000499527.6
CDS TCA 72 bp GGAGGAATATACAGAGGGCACAGGTTAACTACAGGGTaGAGGCCACAGCACACACAGAATAAGTTCCAGAGT +
Preference number: 6 (lower is better)
Translates to: GGIYRGHRLTTG*RPQHTQNKFQS
Trigger: ACTCTGGAACTTATTCTGTGTGTGCTGTGGCCTTCACCCTGTAGTTAACCTGTGCCCTCTGTATATTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499527.6
CDS CCA 72 bp GTCATTTCCTCAGTCATAAAAGCGCCACATGATCTATaGACGATGCTTAGGAACGCTACTTGGAGCTCTCGC +
Preference number: 6 (lower is better)
Translates to: VISSVIKAPHDL*TMLRNATWSSR
Trigger: GCGAGAGCTCCAAGTAGCGTTCCTAAGCATCGTCCATAGATCATGTGGCGCTTTTATGACTGAGGAAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514749.5
CDS CAA 72 bp CAGCCCTGGGAGGAATTTTTGAAGCTTGAAGCACTTTaGTTTGTGCATGAAGACTCCGCACTGCTATTGGGG +
Preference number: 6 (lower is better)
Translates to: QPWEEFLKLEAL*FVHEDSALLLG
Trigger: CCCCAATAGCAGTGCGGAGTCTTCATGCACAAACAAAAGTGCTTCAAGCTTCAAAAATTCCTCCCAGGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS CAA 90 bp GATCTATGGACGATGCTTAGGAACGCTACTTGGAGCTCTCGCCTCTaGAATTTCAACGCCATTAAGGAAGTCCTTGATGTCTACTGCTAC +
Preference number: 6 (lower is better)
Translates to: DLWTMLRNATWSSRL*NFNAIKEVLDVYCY
Trigger: GTAGCAGTAGACATCAAGGACTTCCTTAATGGCGTTGAAATTCAAGAGGCGAGAGCTCCAAGTAGCGTTCCTAAGCATCGTCCATAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514749.5
CDS TCA 72 bp CGATGCTTAGGAACGCTACTTGGAGCTCTCGCCTCTTaGATTTCAACGCCATTAAGGAAGTCCTTGATGTCT +
Preference number: 6 (lower is better)
Translates to: RCLGTLLGALAS*ISTPLRKSLMS
Trigger: AGACATCAAGGACTTCCTTAATGGCGTTGAAATTCAAGAGGCGAGAGCTCCAAGTAGCGTTCCTAAGCATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514749.5
CDS GCA 72 bp TTTATTTCGCCATTTTCATTGGCTGCCAATCTCTGTTaGTCCTCCGTGGGCTCCTTAAGCTCATATTTGCGC +
Preference number: 6 (lower is better)
Translates to: FISPFSLAANLC*SSVGSLSSYLR
Trigger: GCGCAAATATGAGCTTAAGGAGCCCACGGAGGAGCAACAGAGATTGGCAGCCAATGAAAATGGCGAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS CCA 72 bp ACCACCAATCAGGTAAAATCTGAGCATTGGTCTTGGTaGAGGTGGTGGTTCATCAGGATCCTGGCATCTTTT +
Preference number: 6 (lower is better)
Translates to: TTNQVKSEHWSW*RWWFIRILASF
Trigger: AAAAGATGCCAGGATCCTGATGAACCACCACCTCCACCAAGACCAATGCTCAGATTTTACCTGATTGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
ENST00000511051.5
CDS CCA 72 bp CCACATGATCTATGGACGATGCTTAGGAACGCTACTTaGAGCTCTCGCCTCTTGAATTTCAACGCCATTAAG +
Preference number: 6 (lower is better)
Translates to: PHDLWTMLRNAT*SSRLLNFNAIK
Trigger: CTTAATGGCGTTGAAATTCAAGAGGCGAGAGCTCCAAGTAGCGTTCCTAAGCATCGTCCATAGATCATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514749.5
CDS CAA 72 bp ACGATGCTTAGGAACGCTACTTGGAGCTCTCGCCTCTaGAATTTCAACGCCATTAAGGAAGTCCTTGATGTC +
Preference number: 6 (lower is better)
Translates to: TMLRNATWSSRL*NFNAIKEVLDV
Trigger: GACATCAAGGACTTCCTTAATGGCGTTGAAATTCAAGAGGCGAGAGCTCCAAGTAGCGTTCCTAAGCATCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514749.5
CDS CAA 90 bp GTTAATTTGCAGCCCTGGGAGGAATTTTTGAAGCTTGAAGCACTTTaGTTTGTGCATGAAGACTCCGCACTGCTATTGGGGCATTTGGGT +
Preference number: 6 (lower is better)
Translates to: VNLQPWEEFLKLEAL*FVHEDSALLLGHLG
Trigger: ACCCAAATGCCCCAATAGCAGTGCGGAGTCTTCATGCACAAACAAAAGTGCTTCAAGCTTCAAAAATTCCTCCCAGGGCTGCAAATTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS CCA 72 bp CACGCAAGTCTAACATCCTCCCTATTAACACAATGGTaGACCACGAAGAACGCACTGAAGCTTAAACTTGTG +
Preference number: 6 (lower is better)
Translates to: HASLTSSLLTQW*TTKNALKLKLV
Trigger: CACAAGTTTAAGCTTCAGTGCGTTCTTCGTGGTCCACCATTGTGTTAATAGGGAGGATGTTAGACTTGCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS CCA 72 bp GCTGCAGCCGCCTGCAAGTTTGTTAATTTGCAGCCCTaGGAGGAATTTTTGAAGCTTGAAGCACTTTTGTTT +
Preference number: 6 (lower is better)
Translates to: AAAACKFVNLQP*EEFLKLEALLF
Trigger: AAACAAAAGTGCTTCAAGCTTCAAAAATTCCTCCCAGGGCTGCAAATTAACAAACTTGCAGGCGGCTGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS CAA 72 bp ATTTATTTCGCCATTTTCATTGGCTGCCAATCTCTGTaGCTCCTCCGTGGGCTCCTTAAGCTCATATTTGCG +
Preference number: 6 (lower is better)
Translates to: IYFAIFIGCQSL*LLRGLLKLIFA
Trigger: CGCAAATATGAGCTTAAGGAGCCCACGGAGGAGCAACAGAGATTGGCAGCCAATGAAAATGGCGAAATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS CAA 90 bp CGGAATTTCCCCTTTAGTGCCAGACTCGAAAATGTATTTGAAACATaGCACTTAAAGCTCAGCTGCTTATCCAGGTTTCCCTCTGGATCC +
Preference number: 6 (lower is better)
Translates to: RNFPFSARLENVFET*HLKLSCLSRFPSGS
Trigger: GGATCCAGAGGGAAACCTGGATAAGCAGCTGAGCTTTAAGTGCAATGTTTCAAATACATTTTCGAGTCTGGCACTAAAGGGGAAATTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508133.5
CDS CCA 72 bp GCAATTCGACGCAGTGTCACATTAACAGGGATGTGGTaGGTATCTACATTCACACCATCTATTTTGGTGAGA +
Preference number: 6 (lower is better)
Translates to: AIRRSVTLTGMW*VSTFTPSILVR
Trigger: TCTCACCAAAATAGATGGTGTGAATGTAGATACCCACCACATCCCTGTTAATGTGACACTGCGTCGAATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000506155.1
CDS CCA 72 bp TGTGCAATTCGACGCAGTGTCACATTAACAGGGATGTaGTGGGTATCTACATTCACACCATCTATTTTGGTG +
Preference number: 6 (lower is better)
Translates to: CAIRRSVTLTGM*WVSTFTPSILV
Trigger: CACCAAAATAGATGGTGTGAATGTAGATACCCACCACATCCCTGTTAATGTGACACTGCGTCGAATTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000506155.1
CDS CCA 72 bp ATCCACGCAAGTCTAACATCCTCCCTATTAACACAATaGTGGACCACGAAGAACGCACTGAAGCTTAAACTT +
Preference number: 6 (lower is better)
Translates to: IHASLTSSLLTQ*WTTKNALKLKL
Trigger: AAGTTTAAGCTTCAGTGCGTTCTTCGTGGTCCACCATTGTGTTAATAGGGAGGATGTTAGACTTGCGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS CAA 72 bp CCCGGTGTCCTTTACTTCTGTTTTTATGGTGGCGGCTaGAGTGCACATTTGTTCGAAACTGAACTTCTAAAG +
Preference number: 6 (lower is better)
Translates to: PGVLYFCFYGGG*SAHLFETELLK
Trigger: CTTTAGAAGTTCAGTTTCGAACAAATGTGCACTCAAGCCGCCACCATAAAAACAGAAGTAAAGGACACCGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS TCA 72 bp CACAGTACGTCGTTTTCCATCATCAGCCAAATTTGTTaGATTTCCAGTGGCTGGAAAAAGCTTTCCATTGCG +
Preference number: 6 (lower is better)
Translates to: HSTSFSIISQIC*ISSGWKKLSIA
Trigger: CGCAATGGAAAGCTTTTTCCAGCCACTGGAAATTCAACAAATTTGGCTGATGATGGAAAACGACGTACTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000506155.1
CDS CCA 72 bp TTGAATGTTCTGTCAGACTATTATCAAGCTGAGGGGTaGAGTTCAAAGGTAAAGAATTGGCATGGCACTGAG +
Preference number: 6 (lower is better)
Translates to: LNVLSDYYQAEG*SSKVKNWHGTE
Trigger: CTCAGTGCCATGCCAATTCTTTACCTTTGAACTCCACCCCTCAGCTTGATAATAGTCTGACAGAACATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS CCA 72 bp TCAATCGCCACCTCTAGGGGTTTCGTAGGAATTGAATaGACACAATTCATGGGATATAATAGGTGCTCAGTA +
Preference number: 6 (lower is better)
Translates to: SIATSRGFVGIE*TQFMGYNRCSV
Trigger: TACTGAGCACCTATTATATCCCATGAATTGTGTCCATTCAATTCCTACGAAACCCCTAGAGGTGGCGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499527.6
CDS CAA 72 bp TCCATTCTGAATGGCCAAGTTGAGGCCATAAGATTTTaGCTGATTTTCAAGTTCAACCACAGCTGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: SILNGQVEAIRF*LIFKFNHSWLP
Trigger: AGGAAGCCAGCTGTGGTTGAACTTGAAAATCAGCAAAAATCTTATGGCCTCAACTTGGCCATTCAGAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS TCA 72 bp TTGTCCATTGAATGTTCTGTCAGACTATTATCAAGCTaGGGGGTGGAGTTCAAAGGTAAAGAATTGGCATGG +
Preference number: 6 (lower is better)
Translates to: LSIECSVRLLSS*GVEFKGKELAW
Trigger: CCATGCCAATTCTTTACCTTTGAACTCCACCCCTCAGCTTGATAATAGTCTGACAGAACATTCAATGGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000499527.6
CDS TCA 72 bp TGCCTGCTAAGGCAACACTGTGTTCTAATAGACATGTaGCAGGGAATCACAATCCTCAAATACACAAACCAA +
Preference number: 6 (lower is better)
Translates to: CLLRQHCVLIDM*QGITILKYTNQ
Trigger: TTGGTTTGTGTATTTGAGGATTGTGATTCCCTGTCACATGTCTATTAGAACACAGTGTTGCCTTAGCAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499527.6
CDS GCA 72 bp ATTTCCAGTGGCTGGAAAAAGCTTTCCATTGCGGAATaGAATGAGTTGAAGCTTGTAAAGAGAGTCATCAGT +
Preference number: 6 (lower is better)
Translates to: ISSGWKKLSIAE*NELKLVKRVIS
Trigger: ACTGATGACTCTCTTTACAAGCTTCAACTCATTGCATTCCGCAATGGAAAGCTTTTTCCAGCCACTGGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000506155.1
CDS CAA 72 bp CAGGGAATCACAATCCTCAAATACACAAACCAACAATaGGCTCTAGGAAGCCCACAAACTACCATTTATACC +
Preference number: 6 (lower is better)
Translates to: QGITILKYTNQQ*ALGSPQTTIYT
Trigger: GGTATAAATGGTAGTTTGTGGGCTTCCTAGAGCCAATTGTTGGTTTGTGTATTTGAGGATTGTGATTCCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499527.6
CDS CAA 90 bp ATTTCCAGTGGCTGGAAAAAGCTTTCCATTGCGGAATGCAATGAGTaGAAGCTTGTAAAGAGAGTCATCAGTTGGTCTGAGTTCTCTTTT +
Preference number: 6 (lower is better)
Translates to: ISSGWKKLSIAECNE*KLVKRVISWSEFSF
Trigger: AAAAGAGAACTCAGACCAACTGATGACTCTCTTTACAAGCTTCAACTCATTGCATTCCGCAATGGAAAGCTTTTTCCAGCCACTGGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000282943.9
ENST00000334304.10
ENST00000506155.1
CDS CAA 90 bp ACAATAGTATTCTTTAGTGCCAGACTCGAAAATGTATTTGAAACATaGCACTTAAAGCTCAGCTGCTTATCCAGGTTTCCCTCTGGATCC +
Preference number: 6 (lower is better)
Translates to: TIVFFSARLENVFET*HLKLSCLSRFPSGS
Trigger: GGATCCAGAGGGAAACCTGGATAAGCAGCTGAGCTTTAAGTGCAATGTTTCAAATACATTTTCGAGTCTGGCACTAAAGAATACTATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334304.10
CDS CAA 72 bp AAATCAGATGCTGACTCAAAATGGTCAACTCTACTATaGCTGGAGGTGTCTCTGACACAAAGGTCAAAAGAA +
Preference number: 6 (lower is better)
Translates to: KSDADSKWSTLL*LEVSLTQRSKE
Trigger: TTCTTTTGACCTTTGTGTCAGAGACACCTCCAGCAATAGTAGAGTTGACCATTTTGAGTCAGCATCTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499527.6
CDS TCA 72 bp TATTTTAATGAGAACCAATCTGCAGCAAACACTTGGTaGCCTGAAAGCCCAAATCTTCTTTTGCAGGAGAAA +
Preference number: 6 (lower is better)
Translates to: YFNENQSAANTW*PESPNLLLQEK
Trigger: TTTCTCCTGCAAAAGAAGATTTGGGCTTTCAGGTCACCAAGTGTTTGCTGCAGATTGGTTCTCATTAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499527.6
CDS GCA 72 bp TCAAGGAATGTGAGTATCACAGTTTATATGAATTTCTaGCTAGGAAGCCCAGCAATGTTACACAGTAGTTTC +
Preference number: 6 (lower is better)
Translates to: SRNVSITVYMNF*LGSPAMLHSSF
Trigger: GAAACTACTGTGTAACATTGCTGGGCTTCCTAGGCAGAAATTCATATAAACTGTGATACTCACATTCCTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334304.10
ENST00000499527.6
CDS GCA 72 bp ATATCTTATTGTTACTCAGAATCTGCAATTCCAGAATaGTTCGGCCAAAGGACTGTCATTTCCTCAGTCATA +
Preference number: 6 (lower is better)
Translates to: ISYCYSESAIPE*FGQRTVISSVI
Trigger: TATGACTGAGGAAATGACAGTCCTTTGGCCGAAGCATTCTGGAATTGCAGATTCTGAGTAACAATAAGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514749.5
CDS GCA 72 bp TACTTTAAGTGTTTTCATAGATCATGCTGCGGTCCTTaGATTCATGTTTGTATAGTGGCTGCCTTGATTCTT +
Preference number: 6 (lower is better)
Translates to: YFKCFHRSCCGP*IHVCIVAALIL
Trigger: AAGAATCAAGGCAGCCACTATACAAACATGAATGCAAGGACCGCAGCATGATCTATGAAAACACTTAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513385.5
CDS CCA 72 bp TTTATACCAAAGACGACCCTTAATACAGGACAGAACTaGCTCCCAGACATTAAACCAAAAGTGTGTTTTTCA +
Preference number: 6 (lower is better)
Translates to: FIPKTTLNTGQN*LPDIKPKVCFS
Trigger: TGAAAAACACACTTTTGGTTTAATGTCTGGGAGCCAGTTCTGTCCTGTATTAAGGGTCGTCTTTGGTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000499527.6
CDS GCA 72 bp AATTTCAACGCCATTAAGGAAGTCCTTGATGTCTACTaGTACCATTTAACACAGTACCAAGTTTTAGTTTGG +
Preference number: 6 (lower is better)
Translates to: NFNAIKEVLDVY*YHLTQYQVLVW
Trigger: CCAAACTAAAACTTGGTACTGTGTTAAATGGTAGCAGTAGACATCAAGGACTTCCTTAATGGCGTTGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514749.5
CDS CAA 72 bp AGACAGAAGTGGAACAGAAAGCATAAAATAACCCTTTaGAGCTATCAAGTCACACCAAATACTGTAAGTAAA +
Preference number: 6 (lower is better)
Translates to: RQKWNRKHKITL*SYQVTPNTVSK
Trigger: TTTACTTACAGTATTTGGTGTGACTTGATAGCTCAAAAGGGTTATTTTATGCTTTCTGTTCCACTTCTGTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499527.6