RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000020181

Ensembl transcript IDs: ENST00000315215.11, ENST00000412232.3, ENST00000428068.5

Found 797 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCATCGGCTCCTCTGCCTCCAACCTGCTGACTACGGAGACACCTTaGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCG +
Preference number: 1 (lower is better)
Translates to: AIGSSASNLLTTETP*RAPRSGGTSRVASP
Trigger: CGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTCTCCGTAGTCAGCAGGTTGGAGGCAGAGGAGCCGATGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR TCA 90 bp CCTGTGGGCTTCCTCCAGCCATCGGCTCCTCTGCCTCCAACCTGCTaGCTACGGAGACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGA +
Preference number: 1 (lower is better)
Translates to: PVGFLQPSAPLPPTC*LRRHLGGPRGAGER
Trigger: TCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTCTCCGTAGTCAGCAGGTTGGAGGCAGAGGAGCCGATGGCTGGAGGAAGCCCACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 90 bp GTGGGGAACATCCGCCTGTGGGCTTCCTCCAGCCATCGGCTCCTCTaGCTCCAACCTGCTGACTACGGAGACACCTTGGAGGGCCCCGAG +
Preference number: 1 (lower is better)
Translates to: VGNIRLWASSSHRLL*LQPADYGDTLEGPE
Trigger: CTCGGGGCCCTCCAAGGTGTCTCCGTAGTCAGCAGGTTGGAGGCAGAGGAGCCGATGGCTGGAGGAAGCCCACAGGCGGATGTTCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR TCA 90 bp GGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTaGAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACTG +
Preference number: 1 (lower is better)
Translates to: GSGRPVLPFSCHPAC*SPRSGSALYPLSPL
Trigger: CAGTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 90 bp GGATGTGCTGTGCCCTTTCACACAGACGGAGGCCTTCCCCGTTCCTaGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATG +
Preference number: 1 (lower is better)
Translates to: GCAVPFHTDGGLPRS*EGTDSQTAPGWTEM
Trigger: CATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGGGAAGGCCTCCGTCTGTGTGAAAGGGCACAGCACATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 90 bp CCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATaGGACAGCAGAAGTGGAGACCCGAGAGAAGGAGCCACCGGGGTG +
Preference number: 1 (lower is better)
Translates to: PSPAPPVTGPLCLSG*DSRSGDPREGATGV
Trigger: CACCCCGGTGGCTCCTTCTCTCGGGTCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 90 bp TCCTCCTGCAGGCCTGAGGGGGCTTCCCTCTGCTTGTGGAGTGGTTaGCATTCCCAGCAGTATCAACCCTCAGAGGAGCGGGAACTGGGG +
Preference number: 1 (lower is better)
Translates to: SSCRPEGASLCLWSG*HSQQYQPSEERELG
Trigger: CCCCAGTTCCCGCTCCTCTGAGGGTTGATACTGCTGGGAATGCCAACCACTCCACAAGCAGAGGGAAGCCCCCTCAGGCCTGCAGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 90 bp AGACGGAGGCCTTCCCCGTTCCTGGGAGGGCACCGACAGTCAGACTaGCCCGGGCTGGACGGAAATGTATTATGCGTGTTTCTGGGATTG +
Preference number: 1 (lower is better)
Translates to: RRRPSPFLGGHRQSD*PGLDGNVLCVFLGL
Trigger: CAATCCCAGAAACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGGGAAGGCCTCCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 90 bp GGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTATTATaGGTGTTTCTGGGATTGTCTGTCGCTACCCCAGAGGGATGCCCT +
Preference number: 1 (lower is better)
Translates to: GHRQSDCPGLDGNVL*VFLGLSVATPEGCP
Trigger: AGGGCATCCCTCTGGGGTAGCGACAGACAATCCCAGAAACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTaGAGGCCTGAGGGGGCTTCCCTCTGCTTGTGGAGTGGTTGGCAT +
Preference number: 1 (lower is better)
Translates to: LFAAGLNWTHCCGSS*RPEGASLCLWSGWH
Trigger: ATGCCAACCACTCCACAAGCAGAGGGAAGCCCCCTCAGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR TCA 90 bp GCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGGTGTGCCACCTCTaGACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTG +
Preference number: 1 (lower is better)
Translates to: AVEVQGLSFVPVCHL*TLLSGLSTTPVGMV
Trigger: CACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCACACCGGGACAAAGCTGAGGCCCTGCACCTCAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR TCA 90 bp GCCCAGGCTGCTAGACAGGCTGCCACGAGTGTCCCTAACCCTCCCTaGTGGATATCCACTGGGAGCACTTCATCCTGTTCTGACAGCTTG +
Preference number: 1 (lower is better)
Translates to: AQAARQAATSVPNPP*WISTGSTSSCSDSL
Trigger: CAAGCTGTCAGAACAGGATGAAGTGCTCCCAGTGGATATCCATCAGGGAGGGTTAGGGACACTCGTGGCAGCCTGTCTAGCAGCCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 90 bp GAAAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTaGGGCTCCTCCTGCAGGCCTGAGGGGGCTTCCCTCTGCTTGTGG +
Preference number: 1 (lower is better)
Translates to: ENVRLFAAGLNWTHC*GSSCRPEGASLCLW
Trigger: CCACAAGCAGAGGGAAGCCCCCTCAGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 90 bp TGGGAAAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTaGTGCGGCTCCTCCTGCAGGCCTGAGGGGGCTTCCCTCTGCTTG +
Preference number: 1 (lower is better)
Translates to: WENVRLFAAGLNWTH*CGSSCRPEGASLCL
Trigger: CAAGCAGAGGGAAGCCCCCTCAGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 90 bp CTTCCCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTaGACGGAAATGTATTATGCGTGTTTCTGGGATTGTCTGTCGCTA +
Preference number: 1 (lower is better)
Translates to: LPRSWEGTDSQTAPG*TEMYYACFWDCLSL
Trigger: TAGCGACAGACAATCCCAGAAACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 90 bp GTATTATGCGTGTTTCTGGGATTGTCTGTCGCTACCCCAGAGGGATaGCCTCTAGGCAAGTGGGGAACATCCGCCTGTGGGCTTCCTCCA +
Preference number: 1 (lower is better)
Translates to: VLCVFLGLSVATPEG*PLGKWGTSACGLPP
Trigger: TGGAGGAAGCCCACAGGCGGATGTTCCCCACTTGCCTAGAGGGCATCCCTCTGGGGTAGCGACAGACAATCCCAGAAACACGCATAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTaGCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATT +
Preference number: 1 (lower is better)
Translates to: ALLLPPCMLKSPKRI*PVPPVSTVTGDENI
Trigger: AATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 90 bp GGGCCTCAGCTTTGTCCCGGTGTGCCACCTCTGAACCCTGCTGTCTaGTTTAAGTACCACTCCTGTGGGAATGGTGGCATTGTTCCTAGT +
Preference number: 1 (lower is better)
Translates to: GPQLCPGVPPLNPAV*FKYHSCGNGGIVPS
Trigger: ACTAGGAACAATGCCACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCACACCGGGACAAAGCTGAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR TCA 90 bp CCCACCCTCCCCTCTTGCATAGTGGATCTGAAAAGCAGCACCTTGTaGCTTAACATCACCTGCTTCATGTGCTGGGCTAGCTCTCGTGCC +
Preference number: 1 (lower is better)
Translates to: PTLPSCIVDLKSSTL*LNITCFMCWASSRA
Trigger: GGCACGAGAGCTAGCCCAGCACATGAAGCAGGTGATGTTAAGTCACAAGGTGCTGCTTTTCAGATCCACTATGCAAGAGGGGAGGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 90 bp GTGGTTGGCATTCCCAGCAGTATCAACCCTCAGAGGAGCGGGAACTaGGGAATTCTGGCCCTACGTGCATTCACAGGCAATGATGGGTTT +
Preference number: 1 (lower is better)
Translates to: VVGIPSSINPQRSGN*GILALRAFTGNDGF
Trigger: AAACCCATCATTGCCTGTGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATACTGCTGGGAATGCCAACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 90 bp GATGGCTTTCCTCATAGATGGATGGGAAAATGTCAGGCTCTTTGCTaGTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCC +
Preference number: 1 (lower is better)
Translates to: DGFPHRWMGKCQALC*WFELDTLLRLLLQA
Trigger: GGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTTTCCCATCCATCTATGAGGAAAGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 90 bp TTCCCAGCAGTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTaGCCCTACGTGCATTCACAGGCAATGATGGGTTTGTGTGTATGG +
Preference number: 1 (lower is better)
Translates to: FPAVSTLRGAGTGEF*PYVHSQAMMGLCVW
Trigger: CCATACACACAAACCCATCATTGCCTGTGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATACTGCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 90 bp AATGATTGGGATGGTTCTTCCTCTGGCCTTACGGAGGCAAGGAAGTaGTCTTCCTTAGTCCCGTGGTGTTGTAAGGCTGAGACTAGGGAG +
Preference number: 1 (lower is better)
Translates to: NDWDGSSSGLTEARK*SSLVPWCCKAETRE
Trigger: CTCCCTAGTCTCAGCCTTACAACACCACGGGACTAAGGAAGAGCACTTCCTTGCCTCCGTAAGGCCAGAGGAAGAACCATCCCAATCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 90 bp TCCTCTGGCCTTACGGAGGCAAGGAAGTGCTCTTCCTTAGTCCCGTaGTGTTGTAAGGCTGAGACTAGGGAGATGGGTCTTGTAACTGAA +
Preference number: 1 (lower is better)
Translates to: SSGLTEARKCSSLVP*CCKAETREMGLVTE
Trigger: TTCAGTTACAAGACCCATCTCCCTAGTCTCAGCCTTACAACACCACGGGACTAAGGAAGAGCACTTCCTTGCCTCCGTAAGGCCAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 90 bp AGTGCAGGGATGACTATAGGTAGGAGAGATTCCCATCCCTTGGTGTaGGAGAGCAAGTTGCCTATGTCCATGTTCTGTGAGATGGCTTTC +
Preference number: 1 (lower is better)
Translates to: SAGMTIGRRDSHPLV*ESKLPMSMFCEMAF
Trigger: GAAAGCCATCTCACAGAACATGGACATAGGCAACTTGCTCTCCCACACCAAGGGATGGGAATCTCTCCTACCTATAGTCATCCCTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR TCA 90 bp CCATCCCTTGGTGTGGGAGAGCAAGTTGCCTATGTCCATGTTCTGTaGGATGGCTTTCCTCATAGATGGATGGGAAAATGTCAGGCTCTT +
Preference number: 1 (lower is better)
Translates to: PSLGVGEQVAYVHVL*DGFPHRWMGKCQAL
Trigger: AAGAGCCTGACATTTTCCCATCCATCTATGAGGAAAGCCATCTCACAGAACATGGACATAGGCAACTTGCTCTCCCACACCAAGGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 90 bp TTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTaGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGGGGAAA +
Preference number: 1 (lower is better)
Translates to: FLLFFPRPRVPSVSI*SCSEMLVVGFRLGK
Trigger: TTTCCCCAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 90 bp TTCTGGCCCTACGTGCATTCACAGGCAATGATGGGTTTGTGTGTATaGTGTCATGAGATCCTCTACCTCATAACAAAAGGACAGTGGGTA +
Preference number: 1 (lower is better)
Translates to: FWPYVHSQAMMGLCV*CHEILYLITKGQWV
Trigger: TACCCACTGTCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCATTGCCTGTGAATGCACGTAGGGCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR TCA 90 bp CTACGTGCATTCACAGGCAATGATGGGTTTGTGTGTATGGTGTCATaGGATCCTCTACCTCATAACAAAAGGACAGTGGGTAGACTAAGG +
Preference number: 1 (lower is better)
Translates to: LRAFTGNDGFVCMVS*DPLPHNKRTVGRLR
Trigger: CCTTAGTCTACCCACTGTCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCATTGCCTGTGAATGCACGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 90 bp TCCTGTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTaGTTTTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTT +
Preference number: 1 (lower is better)
Translates to: SCYNQGWKCTPVRRY*FSCLKEPRGALPLV
Trigger: AACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CAA 90 bp AGCCATCGGCTCCTCTGCCTCCAACCTGCTGACTACGGAGACACCTaGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: SHRLLCLQPADYGDT*EGPEERGNEPRGQP
Trigger: GGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTCTCCGTAGTCAGCAGGTTGGAGGCAGAGGAGCCGATGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCGGGGAACGAGCCGCGTaGCCAGCCCGTCTACCGCGT +
Preference number: 2 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVGERAA*PARLPR
Trigger: ACGCGGTAGACGGGCTGGCCACGCGGCTCGTTCCCC...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGATGCTGCGGCTCCTCCTaGAGGCCTGAGGGGGCTTCC +
Preference number: 2 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGCCGSS*RPEGAS
Trigger: GGAAGCCCCCTCAGGCCTGCAGGAGGAGCCGCAGCA...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CAA 90 bp GGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTaGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACT +
Preference number: 2 (lower is better)
Translates to: GKRPASPALLLPPCM*KSPKRICPVPPVST
Trigger: AGTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCATCCCCGAAGCGGATCTaGCCTGTACCCCCTGTCTCC +
Preference number: 2 (lower is better)
Translates to: SLGLPQGKRPASPALLLPSPKRI*PVPPVS
Trigger: GGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGA...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR TCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGACCTCTGGGCTTGGCTTaGGCTCCTGGGAGTCGGGAA +
Preference number: 2 (lower is better)
Translates to: TASHWSALPFGMGQQKWRPLGLA*APGSRE
Trigger: TTCCCGACTCCCAGGAGCTCAAGCCAAGCCCAGAGG...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGATGCCCCAGTTCCACCTaGCCTCTCCCTCTACTCCCC +
Preference number: 2 (lower is better)
Translates to: TASHWSALPFGMGQQKWRCPSST*PLPLLP
Trigger: GGGGAGTAGAGGGAGAGGGCAGGTGGAACTGGGGCA...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGAGGGAACATCCGCCTGTaGGCTTCCTCCAGCCATCGG +
Preference number: 2 (lower is better)
Translates to: TASHWSALPFGMGQQKWRGNIRL*ASSSHR
Trigger: CCGATGGCTGGAGGAAGCCCACAGGCGGATGTTCCC...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGATGGGGAGGGTGCACCTaGGATGTGCTGTGCCCTTTC +
Preference number: 2 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGWGGCT*DVLCPF
Trigger: GAAAGGGCACAGCACATCCCAGGTGCACCCTCCCCA...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGACCCCTCCCCCAGGACTaGTTGATGTCTAGAGCTGCC +
Preference number: 2 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGPLPQD*LMSRAA
Trigger: GGCAGCTCTAGACATCAACCAGTCCTGGGGGAGGGG...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCAAGCCATCGGCTCCTCTaGCTCCAACCTGCTGACTAC +
Preference number: 2 (lower is better)
Translates to: SLGLPQGKRPASPALLLPSHRLL*LQPADY
Trigger: GTAGTCAGCAGGTTGGAGGCAGAGGAGCCGATGGCT...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGAGCTACCCCAGAGGGATaGCCTCTAGGCAAGTGGGGA +
Preference number: 2 (lower is better)
Translates to: TASHWSALPFGMGQQKWRATPEG*PLGKWG
Trigger: TCCCCACTTGCCTAGAGGGCATCCCTCTGGGGTAGC...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACCACCGACAGTCAGACTaGCCCGGGCTGGACGGAAAT +
Preference number: 2 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHHRQSD*PGLDGN
Trigger: ATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTG...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCATCACCTGCTTCATGTaGTGGGCTAGCTCTCGTGCC +
Preference number: 2 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVITCFM*WASSRA
Trigger: GGCACGAGAGCTAGCCCAGCACATGAAGCAGGTGAT...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGAGGGGGCTTCCCTCTaGTTGTGGAGTGGTTGGCAT +
Preference number: 2 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGEGASL*LWSGWH
Trigger: ATGCCAACCACTCCACAAGCAGAGGGAAGCCCCCTC...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTGGCCTTCCCCGTTCCTaGGAGGGCACCGACAGTCAG +
Preference number: 2 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPGLPRS*EGTDSQ
Trigger: CTGACTGTCGGTGCCCTCCCAGGAACGGGGAAGGCC...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCGATCTAGGCAGGGGCTaGGCTGAAATCAGTAGAGGG +
Preference number: 2 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVDLGRG*AEISRG
Trigger: CCCTCTACTGATTTCAGCCCAGCCCCTGCCTAGATC...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR TCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGATCCCCCAGGACTGGTTaGTGTCTAGAGCTGCCTTTC +
Preference number: 2 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGSPRTG*CLELPF
Trigger: GAAAGGCAGCTCTAGACATCAACCAGTCCTGGGGGA...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCAACCTGGGATGTGCTGTaGCCTTTCACACAGACGGAG +
Preference number: 2 (lower is better)
Translates to: SLGLPQGKRPASPALLLPTWDVL*PFTQTE
Trigger: CTCCGTCTGTGTGAAAGGGCACAGCACATCCCAGGT...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp GGAATGGTGGCATTGTTCCTAGTTGTGCCCGGTTCCCACTCCCCTCCCCCAGGAAGTACTTGGGGAGGGTaGACCTGGGATGTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: GMVALFLVVPGSHSPPPGSTWGG*TWDVLC
Trigger: GCACAGCACATCCCAGGTGCACCCTCCCCAAGTACT...TCCTGGGGGAGGGGAGTGGGAACCGGGCACAACTAGGAACAATGCCACCATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCAAGTCAGCTGTTGAGGTaGAGGGCCTCAGCTTTGTCC +
Preference number: 2 (lower is better)
Translates to: SLGLPQGKRPASPALLLPSQLLR*RASALS
Trigger: GGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACT...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTGGGGAACGAGCCGCGTaGCCAGCCCGTCTACCGCGT +
Preference number: 2 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPGERAA*PARLPR
Trigger: ACGCGGTAGACGGGCTGGCCACGCGGCTCGTTCCCC...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCAGATCTAGGCAGGGGCTaGGCTGAAATCAGTAGAGGG +
Preference number: 2 (lower is better)
Translates to: SLGLPQGKRPASPALLLPDLGRG*AEISRG
Trigger: CCCTCTACTGATTTCAGCCCAGCCCCTGCCTAGATC...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCGGAACTGGGGAATTCTaGCCCTACGTGCATTCACAG +
Preference number: 2 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVGTGEF*PYVHSQ
Trigger: CTGTGAATGCACGTAGGGCCAGAATTCCCCAGTTCC...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR TCA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACTGCCTCCAACCTGCTaGCTACGGAGACACCTTGGA +
Preference number: 2 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVLPPTC*LRRHLG
Trigger: TCCAAGGTGTCTCCGTAGTCAGCAGGTTGGAGGCAG...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR TCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACTCCCCCAGGACTGGTTaGTGTCTAGAGCTGCCTTTC +
Preference number: 2 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHSPRTG*CLELPF
Trigger: GAAAGGCAGCTCTAGACATCAACCAGTCCTGGGGGA...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR TCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCTCTTTGCTGCTGGTTTaGATTGGACACACTGCTGCG +
Preference number: 2 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVSLLLV*IGHTAA
Trigger: CGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGA...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCACGCTCTCATCTCTaGTTTGCTGGTGAGGCTGAT +
Preference number: 2 (lower is better)
Translates to: SLGLPQGKRPASPALLLPPRSHL*FAGEAD
Trigger: ATCAGCCTCACCAGCAAAGCAGAGATGAGAGCGTGG...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACGGCATGACTAGATTCTaGCCCAGTTCCACCTGCCCT +
Preference number: 2 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHGMTRF*PSSTCP
Trigger: AGGGCAGGTGGAACTGGGGCAGAATCTAGTCATGCC...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTATCACCCACAGGCACCTaGCAGTCAGCTGTTGAGGTG +
Preference number: 2 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVSPTGT*QSAVEV
Trigger: CACCTCAACAGCTGACTGCCAGGTGCCTGTGGGTGA...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACGCTTCCCTCTGCTTGTaGAGTGGTTGGCATTCCCAG +
Preference number: 2 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHASLCL*SGWHSQ
Trigger: CTGGGAATGCCAACCACTCCACAAGCAGAGGGAAGC...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCATCCCATCCCTTGGTGTaGGAGAGCAAGTTGCCTATG +
Preference number: 2 (lower is better)
Translates to: SLGLPQGKRPASPALLLPSHPLV*ESKLPM
Trigger: CATAGGCAACTTGCTCTCCCACACCAAGGGATGGGA...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CAA 90 bp ACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTGGCATaGTTCCTAGTTGTGCCCGGTTCCCACTCCCCTCCCCCAGGACTG +
Preference number: 2 (lower is better)
Translates to: TLLSGLSTTPVGMVA*FLVVPGSHSPPPGL
Trigger: CAGTCCTGGGGGAGGGGAGTGGGAACCGGGCACAACTAGGAACAATGCCACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR TCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTCCGGTGTGCCACCTCTaGACCCTGCTGTCTGGTTTA +
Preference number: 2 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPPVCHL*TLLSGL
Trigger: TAAACCAGACAGCAGGGTTCAGAGGTGGCACACCGG...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTACTACGGAGACACCTTaGAGGGCCCCGAGGAGCGGG +
Preference number: 2 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPTTETP*RAPRSG
Trigger: CCCGCTCCTCGGGGCCCTCCAAGGTGTCTCCGTAGT...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGTCTTCCTTAGTCCCGTaGTGTTGTAAGGCTGAGACT +
Preference number: 2 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGSSLVP*CCKAET
Trigger: AGTCTCAGCCTTACAACACCACGGGACTAAGGAAGA...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGTGCTTGTGGAGTGGTTaGCATTCCCAGCAGTATCAA +
Preference number: 2 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGCLWSG*HSQQYQ
Trigger: TTGATACTGCTGGGAATGCCAACCACTCCACAAGCA...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACCCTCTGCTTGTGGAGTaGTTGGCATTCCCAGCAGTA +
Preference number: 2 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHPLLVE*LAFPAV
Trigger: TACTGCTGGGAATGCCAACCACTCCACAAGCAGAGG...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGCAGGCTCTTTGCTGCTaGTTTGAATTGGACACACTG +
Preference number: 2 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGQALCC*FELDTL
Trigger: CAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTG...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACTCCCATCCCTTGGTGTaGGAGAGCAAGTTGCCTATG +
Preference number: 2 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHSHPLV*ESKLPM
Trigger: CATAGGCAACTTGCTCTCCCACACCAAGGGATGGGA...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR TCA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGAAAAGCAGCACCTTGTaGCTTAACATCACCTGCTTC +
Preference number: 2 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPKSSTL*LNITCF
Trigger: GAAGCAGGTGATGTTAAGTCACAAGGTGCTGCTTTT...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCTGTCAGGCTCTTTGCTaGTGGTTTGAATTGGACACA +
Preference number: 2 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVCQALC*WFELDT
Trigger: TGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACA...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTGAGCTGCCTTTCACGTaGCCCCACCCTCCCCTCTTG +
Preference number: 2 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPELPFT*PHPPLL
Trigger: CAAGAGGGGAGGGTGGGGCCACGTGAAAGGCAGCTC...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTAGAGATTCCCATCCCTTaGTGTGGGAGAGCAAGTTGC +
Preference number: 2 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVEIPIP*CGRASC
Trigger: GCAACTTGCTCTCCCACACCAAGGGATGGGAATCTC...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTTGCCCTCTAGGCAAGTaGGGAACATCCGCCTGTGGG +
Preference number: 2 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPCPLGK*GTSACG
Trigger: CCCACAGGCGGATGTTCCCCACTTGCCTAGAGGGCA...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTTGGGGAGGGTGCACCTaGGATGTGCTGTGCCCTTTC +
Preference number: 2 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPWGGCT*DVLCPF
Trigger: GAAAGGGCACAGCACATCCCAGGTGCACCCTCCCCA...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGCCCAGTGAGGCCGCATaGACAGTAGGCGGGGTGGGA +
Preference number: 2 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLPSEAA*TVGGVG
Trigger: TCCCACCCCGCCTACTGTCCATGCGGCCTCACTGGG...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGTCTCTACTGTGGAGCTaGAGATCAAATGATTGGGAT +
Preference number: 2 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGSLLWS*RSNDWD
Trigger: ATCCCAATCATTTGATCTCCAGCTCCACAGTAGAGA...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACCCCTCGGTTTCCATTTaGTCCTGTAGTGAAATGCTG +
Preference number: 2 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHPSVSI*SCSEML
Trigger: CAGCATTTCACTACAGGACCAAATGGAAACCGAGGG...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACCTGATGGATATCCACTaGGAGCACTTCATCCTGTTC +
Preference number: 2 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHLMDIH*EHFILF
Trigger: GAACAGGATGAAGTGCTCCCAGTGGATATCCATCAG...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CAA 90 bp TTCCTCATAGATGGATGGGAAAATGTCAGGCTCTTTGCTGCTGGTTaGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTGAGGGG +
Preference number: 2 (lower is better)
Translates to: FLIDGWENVRLFAAG*NWTHCCGSSCRPEG
Trigger: CCCCTCAGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTTTCCCATCCATCTATGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR TCA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGCCTCTGGGCTTGGCTTaGGCTCCTGGGAGTCGGGAA +
Preference number: 2 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLPLGLA*APGSRE
Trigger: TTCCCGACTCCCAGGAGCTCAAGCCAAGCCCAGAGG...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp GTGCCACCTCTGAACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTACCTGGGATGTGCTGTaGCCTTTCACACAGACGGAG +
Preference number: 2 (lower is better)
Translates to: VPPLNPAVWFKYHSCGNGTWDVL*PFTQTE
Trigger: CTCCGTCTGTGTGAAAGGGCACAGCACATCCCAGGT...ACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCTCACCCACAGGCACCTaGCAGTCAGCTGTTGAGGTG +
Preference number: 2 (lower is better)
Translates to: KCQALCCWFELDTLLRLLSPTGT*QSAVEV
Trigger: CACCTCAACAGCTGACTGCCAGGTGCCTGTGGGTGA...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGATGGAGATCAAATGATTaGGATGGTTCTTCCTCTGGC +
Preference number: 2 (lower is better)
Translates to: TASHWSALPFGMGQQKWRWRSND*DGSSSG
Trigger: GCCAGAGGAAGAACCATCCCAATCATTTGATCTCCA...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR TCA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTAATTGCTTTTCTTGTTTaGAGGAACCAAGAGGGGCTC +
Preference number: 2 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVIAFLV*RNQEGL
Trigger: GAGCCCCTCTTGGTTCCTTCAAACAAGAAAAGCAAT...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTGGTGCACCTGGGATGTaGTGTGCCCTTTCACACAGA +
Preference number: 2 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPGAPGM*CALSHR
Trigger: TCTGTGTGAAAGGGCACAGCACATCCCAGGTGCACC...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCGGTGCACCTGGGATGTaGTGTGCCCTTTCACACAGA +
Preference number: 2 (lower is better)
Translates to: KCQALCCWFELDTLLRLLGAPGM*CALSHR
Trigger: TCTGTGTGAAAGGGCACAGCACATCCCAGGTGCACC...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp GTGCCACCTCTGAACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTCCACGCTCTCATCTCTaGTTTGCTGGTGAGGCTGAT +
Preference number: 2 (lower is better)
Translates to: VPPLNPAVWFKYHSCGNGPRSHL*FAGEAD
Trigger: ATCAGCCTCACCAGCAAAGCAGAGATGAGAGCGTGG...ACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGAATCACCTGCTTCATGTaGTGGGCTAGCTCTCGTGCC +
Preference number: 2 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRITCFM*WASSRA
Trigger: GGCACGAGAGCTAGCCCAGCACATGAAGCAGGTGAT...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTGGCATGACTAGATTCTaGCCCAGTTCCACCTGCCCT +
Preference number: 2 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPGMTRF*PSSTCP
Trigger: AGGGCAGGTGGAACTGGGGCAGAATCTAGTCATGCC...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTATGTCAGGCTCTTTGCTaGTGGTTTGAATTGGACACA +
Preference number: 2 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVCQALC*WFELDT
Trigger: TGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACA...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCAGTCCGTAGGTATTaGTTTTCTTGTTTGAAGGAA +
Preference number: 2 (lower is better)
Translates to: SLGLPQGKRPASPALLLPPVRRY*FSCLKE
Trigger: TTCCTTCAAACAAGAAAAGCAATACCTACGGACTGG...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTAGTAGTGAAATGCTGGTaGTTGGTTTTAGGTTGGGGA +
Preference number: 2 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVVVKCW*LVLGWG
Trigger: TCCCCAACCTAAAACCAACCACCAGCATTTCACTAC...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTGCTTCCCTCTGCTTGTaGAGTGGTTGGCATTCCCAG +
Preference number: 2 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPASLCL*SGWHSQ
Trigger: CTGGGAATGCCAACCACTCCACAAGCAGAGGGAAGC...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGATCTCCAAACACCACCTaGAGCTTTCTGGGGCACCAT +
Preference number: 2 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRSPNTT*SFLGHH
Trigger: ATGGTGCCCCAGAAAGCTGCAGGTGGTGTTTGGAGA...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTCCACCTGCAGCTTTCTaGGGCACCATTGTTTACAGG +
Preference number: 2 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPPPAAF*GTIVYR
Trigger: CCTGTAAACAATGGTGCCCCAGAAAGCTGCAGGTGG...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCATCTTCCTTAGTCCCGTaGTGTTGTAAGGCTGAGACT +
Preference number: 2 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSSSLVP*CCKAET
Trigger: AGTCTCAGCCTTACAACACCACGGGACTAAGGAAGA...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CAA 90 bp GTCAGGAGTGCAGGGATGACTATAGGTAGGAGAGATTCCCATCCCTaGGTGTGGGAGAGCAAGTTGCCTATGTCCATGTTCTGTGAGATG +
Preference number: 2 (lower is better)
Translates to: VRSAGMTIGRRDSHP*VWESKLPMSMFCEM
Trigger: CATCTCACAGAACATGGACATAGGCAACTTGCTCTCCCACACCAAGGGATGGGAATCTCTCCTACCTATAGTCATCCCTGCACTCCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR TCA 90 bp ATGATGGGTTTGTGTGTATGGTGTCATGAGATCCTCTACCTCATAACAAAAGGAGCTGATGGCCCCCAGTaGGGCCGCATGGACAGTAGG +
Preference number: 2 (lower is better)
Translates to: MMGLCVWCHEILYLITKGADGPQ*GRMDSR
Trigger: CCTACTGTCCATGCGGCCTCACTGGGGGCCATCAGC...TCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR TCA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCAAAAAGCAGCACCTTGTaGCTTAACATCACCTGCTTC +
Preference number: 2 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSKSSTL*LNITCF
Trigger: GAAGCAGGTGATGTTAAGTCACAAGGTGCTGCTTTT...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATATCTCCAAACACCACCTaGAGCTTTCTGGGGCACCAT +
Preference number: 2 (lower is better)
Translates to: SALYPLSPLSLEMRTFLISPNTT*SFLGHH
Trigger: ATGGTGCCCCAGAAAGCTGCAGGTGGTGTTTGGAGA...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGACGGAGGCAAGGAAGTaGTCTTCCTTAGTCCCGTGG +
Preference number: 2 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLTEARK*SSLVPW
Trigger: CCACGGGACTAAGGAAGAGCACTTCCTTGCCTCCGT...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp ATGATGGGTTTGTGTGTATGGTGTCATGAGATCCTCTACCTCATAACAAAAGGAACTACGGAGACACCTTaGAGGGCCCCGAGGAGCGGG +
Preference number: 2 (lower is better)
Translates to: MMGLCVWCHEILYLITKGTTETP*RAPRSG
Trigger: CCCGCTCCTCGGGGCCCTCCAAGGTGTCTCCGTAGT...TCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGCAGACTGCCCCGGGCTaGACGGAAATGTATTATGCG +
Preference number: 2 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLQTAPG*TEMYYA
Trigger: CGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTG...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTGGCCTTCCCCGTTCCTaGGAGGGCACCGACAGTCAG +
Preference number: 2 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVGLPRS*EGTDSQ
Trigger: CTGACTGTCGGTGCCCTCCCAGGAACGGGGAAGGCC...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATACCACCTGCAGCTTTCTaGGGCACCATTGTTTACAGG +
Preference number: 2 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIPPAAF*GTIVYR
Trigger: CCTGTAAACAATGGTGCCCCAGAAAGCTGCAGGTGG...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCACCTGTAGTGAAATGCTaGTGGTTGGTTTTAGGTTGG +
Preference number: 2 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSPVVKC*WLVLGW
Trigger: CCAACCTAAAACCAACCACCAGCATTTCACTACAGG...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATAGGAACTGGGGAATTCTaGCCCTACGTGCATTCACAG +
Preference number: 2 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIGTGEF*PYVHSQ
Trigger: CTGTGAATGCACGTAGGGCCAGAATTCCCCAGTTCC...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CAA 90 bp CAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTaGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: QGWKCTPVRRYCFSC*KEPRGALPLVGPWV
Trigger: GACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGATGCCCTCTAGGCAAGTaGGGAACATCCGCCTGTGGG +
Preference number: 2 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRCPLGK*GTSACG
Trigger: CCCACAGGCGGATGTTCCCCACTTGCCTAGAGGGCA...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR TCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTGTCGGGAAGCTGGTTTaGCATTTTGTAGGTTTCTCT +
Preference number: 2 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPVGKLV*HFVGFS
Trigger: AGAGAAACCTACAAAATGTCAAACCAGCTTCCCGAC...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGAAGCCATCGGCTCCTCTaGCTCCAACCTGCTGACTAC +
Preference number: 2 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRSHRLL*LQPADY
Trigger: GTAGTCAGCAGGTTGGAGGCAGAGGAGCCGATGGCT...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCAGACGGAAATGTATTATaGGTGTTTCTGGGATTGTCT +
Preference number: 2 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSDGNVL*VFLGLS
Trigger: AGACAATCCCAGAAACACGCATAATACATTTCCGTC...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGAAGTACTTGGGGAGGGTaGACCTGGGATGTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRSTWGG*TWDVLC
Trigger: GCACAGCACATCCCAGGTGCACCCTCCCCAAGTACT...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTTATTATGCGTGTTTCTaGGATTGTCTGTCGCTACCC +
Preference number: 2 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPYYACF*DCLSLP
Trigger: GGGTAGCGACAGACAATCCCAGAAACACGCATAATA...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CAA 90 bp ACTATAGGTAGGAGAGATTCCCATCCCTTGGTGTGGGAGAGCAAGTaGCCTATGTCCATGTTCTGTGAGATGGCTTTCCTCATAGATGGA +
Preference number: 2 (lower is better)
Translates to: TIGRRDSHPLVWESK*PMSMFCEMAFLIDG
Trigger: TCCATCTATGAGGAAAGCCATCTCACAGAACATGGACATAGGCAACTTGCTCTCCCACACCAAGGGATGGGAATCTCTCCTACCTATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR TCA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTCTGCCTCCAACCTGCTaGCTACGGAGACACCTTGGA +
Preference number: 2 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVLPPTC*LRRHLG
Trigger: TCCAAGGTGTCTCCGTAGTCAGCAGGTTGGAGGCAG...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGAAGTCAGCTGTTGAGGTaGAGGGCCTCAGCTTTGTCC +
Preference number: 2 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRSQLLR*RASALS
Trigger: GGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACT...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CAA 90 bp ACTGGGGAATTCTGGCCCTACGTGCATTCACAGGCAATGATGGGTTaGTGTGTATGGTGTCATGAGATCCTCTACCTCATAACAAAAGGA +
Preference number: 2 (lower is better)
Translates to: TGEFWPYVHSQAMMG*CVWCHEILYLITKG
Trigger: TCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCATTGCCTGTGAATGCACGTAGGGCCAGAATTCCCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTTTGAATTGGACACACTaGTGCGGCTCCTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVLNWTH*CGSSCR
Trigger: CCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAA...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATAAAATGTCAGGCTCTTTaGTGCTGGTTTGAATTGGAC +
Preference number: 2 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIKCQAL*CWFELD
Trigger: GTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTCTTGGCTTGAGCTCCTaGGAGTCGGGAAGCTGGTTT +
Preference number: 2 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVLGLSS*ESGSWF
Trigger: AAACCAGCTTCCCGACTCCCAGGAGCTCAAGCCAAG...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp ATGATGGGTTTGTGTGTATGGTGTCATGAGATCCTCTACCTCATAACAAAAGGATGGTTGGTTTTAGGTTaGGGAAAAGACGGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: MMGLCVWCHEILYLITKGWLVLG*GKDGCW
Trigger: CCAGCACCCGTCTTTTCCCCAACCTAAAACCAACCA...TCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR TCA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTGAGCTGGAGATCAAATaGTTGGGATGGTTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVELEIK*LGWFFL
Trigger: GAGGAAGAACCATCCCAATCATTTGATCTCCAGCTC...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR TCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGACACTTCATCCTGTTCTaGCAGCTTGATAACATTCCT +
Preference number: 2 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRHFILF*QLDNIP
Trigger: AGGAATGTTATCAAGCTGTCAGAACAGGATGAAGTG...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp ATGATGGGTTTGTGTGTATGGTGTCATGAGATCCTCTACCTCATAACAAAAGGATATTATGCGTGTTTCTaGGATTGTCTGTCGCTACCC +
Preference number: 2 (lower is better)
Translates to: MMGLCVWCHEILYLITKGYYACF*DCLSLP
Trigger: GGGTAGCGACAGACAATCCCAGAAACACGCATAATA...TCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGATGTTATAACCAAGGATaGAAGTGTACACCAGTCCGT +
Preference number: 2 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRCYNQG*KCTPVR
Trigger: ACGGACTGGTGTACACTTCCATCCTTGGTTATAACA...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR GCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGAGACGGAAATGTATTATaGGTGTTTCTGGGATTGTCT +
Preference number: 2 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRDGNVL*VFLGLS
Trigger: AGACAATCCCAGAAACACGCATAATACATTTCCGTC...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTGACTACGGAGACACCTaGGAGGGCCCCGAGGAGCGG +
Preference number: 3 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCDYGDT*EGPEER
Trigger: CCGCTCCTCGGGGCCCTCCAAGGTGTCTCCGTAGTC...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 72 bp TCCTCTGCCTCCAACCTGCTGACTACGGAGACACCTTaGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTG +
Preference number: 3 (lower is better)
Translates to: SSASNLLTTETP*RAPRSGGTSRV
Trigger: CACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTCTCCGTAGTCAGCAGGTTGGAGGCAGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 72 bp GTGCCCTTTCACACAGACGGAGGCCTTCCCCGTTCCTaGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGG +
Preference number: 3 (lower is better)
Translates to: VPFHTDGGLPRS*EGTDSQTAPGW
Trigger: CCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGGGAAGGCCTCCGTCTGTGTGAAAGGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp CTGGGATGTGCTGTGCCCTTTCACACAGACGGAGGCCTTCCCCGTTCCTGGGAGGACTACGGAGACACCTaGGAGGGCCCCGAGGAGCGG +
Preference number: 3 (lower is better)
Translates to: LGCAVPFHTDGGLPRSWEDYGDT*EGPEER
Trigger: CCGCTCCTCGGGGCCCTCCAAGGTGTCTCCGTAGTC...CTCCCAGGAACGGGGAAGGCCTCCGTCTGTGTGAAAGGGCACAGCACATCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR TCA 72 bp TTCCTCCAGCCATCGGCTCCTCTGCCTCCAACCTGCTaGCTACGGAGACACCTTGGAGGGCCCCGAGGAGCG +
Preference number: 3 (lower is better)
Translates to: FLQPSAPLPPTC*LRRHLGGPRGA
Trigger: CGCTCCTCGGGGCCCTCCAAGGTGTCTCCGTAGTCAGCAGGTTGGAGGCAGAGGAGCCGATGGCTGGAGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 72 bp TGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTaGAGACCCGAGAGAAGGAGCCACCGGGGTGGGGAC +
Preference number: 3 (lower is better)
Translates to: WSALPFGMGQQK*RPERRSHRGGD
Trigger: GTCCCCACCCCGGTGGCTCCTTCTCTCGGGTCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 72 bp AGTAGGCGGGGTGGGAGTACTTGGGGAGGGTGCACCTaGGATGTGCTGTGCCCTTTCACACAGACGGAGGCC +
Preference number: 3 (lower is better)
Translates to: SRRGGSTWGGCT*DVLCPFTQTEA
Trigger: GGCCTCCGTCTGTGTGAAAGGGCACAGCACATCCCAGGTGCACCCTCCCCAAGTACTCCCACCCCGCCTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 72 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATaGGACAGCAGAAGTGGAGACCCGAGAGAAGGAGCC +
Preference number: 3 (lower is better)
Translates to: APPVTGPLCLSG*DSRSGDPREGA
Trigger: GGCTCCTTCTCTCGGGTCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 72 bp ATCCGCCTGTGGGCTTCCTCCAGCCATCGGCTCCTCTaGCTCCAACCTGCTGACTACGGAGACACCTTGGAG +
Preference number: 3 (lower is better)
Translates to: IRLWASSSHRLL*LQPADYGDTLE
Trigger: CTCCAAGGTGTCTCCGTAGTCAGCAGGTTGGAGGCAGAGGAGCCGATGGCTGGAGGAAGCCCACAGGCGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 72 bp AAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTaGATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTA +
Preference number: 3 (lower is better)
Translates to: KRPASPALLLPP*MLKSPKRICPV
Trigger: TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 72 bp CTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTaGCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCC +
Preference number: 3 (lower is better)
Translates to: LRFTPGEAAGQS*PSLATLHVEVP
Trigger: GGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp CCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTATGCGTGTTTCTGGGATaGTCTGTCGCTACCCCAGAG +
Preference number: 3 (lower is better)
Translates to: PFLGGHRQSDCPGLDGNVCVFLG*SVATPE
Trigger: CTCTGGGGTAGCGACAGACAATCCCAGAAACACGCA...TACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGTGCGTGTTTCTGGGATaGTCTGTCGCTACCCCAGAG +
Preference number: 3 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGCVFLG*SVATPE
Trigger: CTCTGGGGTAGCGACAGACAATCCCAGAAACACGCA...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 72 bp ATGGACAGTAGGCGGGGTGGGAGTACTTGGGGAGGGTaGACCTGGGATGTGCTGTGCCCTTTCACACAGACG +
Preference number: 3 (lower is better)
Translates to: MDSRRGGSTWGG*TWDVLCPFTQT
Trigger: CGTCTGTGTGAAAGGGCACAGCACATCCCAGGTGCACCCTCCCCAAGTACTCCCACCCCGCCTACTGTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 72 bp AGGCCTGAGGGGGCTTCCCTCTGCTTGTGGAGTGGTTaGCATTCCCAGCAGTATCAACCCTCAGAGGAGCGG +
Preference number: 3 (lower is better)
Translates to: RPEGASLCLWSG*HSQQYQPSEER
Trigger: CCGCTCCTCTGAGGGTTGATACTGCTGGGAATGCCAACCACTCCACAAGCAGAGGGAAGCCCCCTCAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 72 bp AGCACATCGGTGACCTTCTCCAGCACCGCCAGTCACTaGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAG +
Preference number: 3 (lower is better)
Translates to: STSVTFSSTASH*SALPFGMGQQK
Trigger: CTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACCGATGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 72 bp GTGTTTCTGGGATTGTCTGTCGCTACCCCAGAGGGATaGCCTCTAGGCAAGTGGGGAACATCCGCCTGTGGG +
Preference number: 3 (lower is better)
Translates to: VFLGLSVATPEG*PLGKWGTSACG
Trigger: CCCACAGGCGGATGTTCCCCACTTGCCTAGAGGGCATCCCTCTGGGGTAGCGACAGACAATCCCAGAAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 72 bp CCTTCCCCGTTCCTGGGAGGGCACCGACAGTCAGACTaGCCCGGGCTGGACGGAAATGTATTATGCGTGTTT +
Preference number: 3 (lower is better)
Translates to: PSPFLGGHRQSD*PGLDGNVLCVF
Trigger: AAACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTAGTGGGAATGGTGGCATaGTTCCTAGTTGTGCCCGGT +
Preference number: 3 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVVGMVA*FLVVPG
Trigger: ACCGGGCACAACTAGGAACAATGCCACCATTCCCAC...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACCTGCTTGTGGAGTGGTaGGCATTCCCAGCAGTATCA +
Preference number: 3 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHLLVEW*AFPAVS
Trigger: TGATACTGCTGGGAATGCCAACCACTCCACAAGCAG...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGACTCTTTGCTGCTGGTTaGAATTGGACACACTGCTGC +
Preference number: 3 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGLFAAG*NWTHCC
Trigger: GCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCAGTGTGGGAGAGCAAGTaGCCTATGTCCATGTTCTGT +
Preference number: 3 (lower is better)
Translates to: SLGLPQGKRPASPALLLPVWESK*PMSMFC
Trigger: ACAGAACATGGACATAGGCAACTTGCTCTCCCACAC...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR TCA 72 bp GTGCAGGGCCTCAGCTTTGTCCCGGTGTGCCACCTCTaGACCCTGCTGTCTGGTTTAAGTACCACTCCTGTG +
Preference number: 3 (lower is better)
Translates to: VQGLSFVPVCHL*TLLSGLSTTPV
Trigger: CACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCACACCGGGACAAAGCTGAGGCCCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 72 bp TTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTaGCCTGTACCCCCTGTCTCCACTGTCACTGGAGAT +
Preference number: 3 (lower is better)
Translates to: LPPCMLKSPKRI*PVPPVSTVTGD
Trigger: ATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 72 bp GCCCCGGGCTGGACGGAAATGTATTATGCGTGTTTCTaGGATTGTCTGTCGCTACCCCAGAGGGATGCCCTC +
Preference number: 3 (lower is better)
Translates to: APGWTEMYYACF*DCLSLPQRDAL
Trigger: GAGGGCATCCCTCTGGGGTAGCGACAGACAATCCCAGAAACACGCATAATACATTTCCGTCCAGCCCGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTCTCCCCCAGGACTGGTaGATGTCTAGAGCTGCCTTT +
Preference number: 3 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPLPQDW*MSRAAF
Trigger: AAAGGCAGCTCTAGACATCAACCAGTCCTGGGGGAG...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACGTGTGGGAGAGCAAGTaGCCTATGTCCATGTTCTGT +
Preference number: 3 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHVWESK*PMSMFC
Trigger: ACAGAACATGGACATAGGCAACTTGCTCTCCCACAC...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 72 bp TCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTaGACGGAAATGTATTATGCGTGTTTCTGGGATTGT +
Preference number: 3 (lower is better)
Translates to: SWEGTDSQTAPG*TEMYYACFWDC
Trigger: ACAATCCCAGAAACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATATGCAGGGCCTCAGCTTaGTCCCGGTGTGCCACCTCT +
Preference number: 3 (lower is better)
Translates to: SALYPLSPLSLEMRTFLICRASA*SRCATS
Trigger: AGAGGTGGCACACCGGGACAAAGCTGAGGCCCTGCA...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTGACCTTGGTTTCCTGTaGTTCTTCCCAAGACCCAGG +
Preference number: 3 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPDLGFL*FFPRPR
Trigger: CCTGGGTCTTGGGAAGAACAACAGGAAACCAAGGTC...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCGAAATAGAACAGTATTaGCGTACCCCTCAGGAAGTT +
Preference number: 3 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVEIEQY*RTPQEV
Trigger: AACTTCCTGAGGGGTACGCAAATACTGTTCTATTTC...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGGAAATAGAACAGTATTaGCGTACCCCTCAGGAAGTT +
Preference number: 3 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGEIEQY*RTPQEV
Trigger: AACTTCCTGAGGGGTACGCAAATACTGTTCTATTTC...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR TCA 72 bp GCTAGACAGGCTGCCACGAGTGTCCCTAACCCTCCCTaGTGGATATCCACTGGGAGCACTTCATCCTGTTCT +
Preference number: 3 (lower is better)
Translates to: ARQAATSVPNPP*WISTGSTSSCS
Trigger: AGAACAGGATGAAGTGCTCCCAGTGGATATCCATCAGGGAGGGTTAGGGACACTCGTGGCAGCCTGTCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 72 bp CAGTCAGACTGCCCCGGGCTGGACGGAAATGTATTATaGGTGTTTCTGGGATTGTCTGTCGCTACCCCAGAG +
Preference number: 3 (lower is better)
Translates to: QSDCPGLDGNVL*VFLGLSVATPE
Trigger: CTCTGGGGTAGCGACAGACAATCCCAGAAACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATAGGGGCTTCCCTCTGCTaGTGGAGTGGTTGGCATTCC +
Preference number: 3 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIGASLC*WSGWHS
Trigger: GGAATGCCAACCACTCCACAAGCAGAGGGAAGCCCC...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 72 bp GATGGTTCTTCCTCTGGCCTTACGGAGGCAAGGAAGTaGTCTTCCTTAGTCCCGTGGTGTTGTAAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: DGSSSGLTEARK*SSLVPWCCKAE
Trigger: CTCAGCCTTACAACACCACGGGACTAAGGAAGAGCACTTCCTTGCCTCCGTAAGGCCAGAGGAAGAACCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 72 bp CTTTGTCCCGGTGTGCCACCTCTGAACCCTGCTGTCTaGTTTAAGTACCACTCCTGTGGGAATGGTGGCATT +
Preference number: 3 (lower is better)
Translates to: LCPGVPPLNPAV*FKYHSCGNGGI
Trigger: AATGCCACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCACACCGGGACAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 72 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTaGCCCTACGTGCATTCACAGGCAATGATGGGTTTG +
Preference number: 3 (lower is better)
Translates to: VSTLRGAGTGEF*PYVHSQAMMGL
Trigger: CAAACCCATCATTGCCTGTGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTGTGGGAATGGTGGCATaGTTCCTAGTTGTGCCCGGT +
Preference number: 3 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPVGMVA*FLVVPG
Trigger: ACCGGGCACAACTAGGAACAATGCCACCATTCCCAC...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 72 bp CTTACGGAGGCAAGGAAGTGCTCTTCCTTAGTCCCGTaGTGTTGTAAGGCTGAGACTAGGGAGATGGGTCTT +
Preference number: 3 (lower is better)
Translates to: LTEARKCSSLVP*CCKAETREMGL
Trigger: AAGACCCATCTCCCTAGTCTCAGCCTTACAACACCACGGGACTAAGGAAGAGCACTTCCTTGCCTCCGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGGCTCTCATCTCTGCTTaGCTGGTGAGGCTGATGGCC +
Preference number: 3 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLALISA*LVRLMA
Trigger: GGCCATCAGCCTCACCAGCAAAGCAGAGATGAGAGC...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCACAGGCAATGATGGGTTaGTGTGTATGGTGTCATGAG +
Preference number: 3 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSQAMMG*CVWCHE
Trigger: CTCATGACACCATACACACAAACCCATCATTGCCTG...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATATGCTGCTGGTTTGAATaGGACACACTGCTGCGGCTC +
Preference number: 3 (lower is better)
Translates to: SALYPLSPLSLEMRTFLICCWFE*DTLLRL
Trigger: GAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCA...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 72 bp CCTCATAGATGGATGGGAAAATGTCAGGCTCTTTGCTaGTGGTTTGAATTGGACACACTGCTGCGGCTCCTC +
Preference number: 3 (lower is better)
Translates to: PHRWMGKCQALC*WFELDTLLRLL
Trigger: GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTTTCCCATCCATCTATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 72 bp GGAGAGATTCCCATCCCTTGGTGTGGGAGAGCAAGTTaGCTATGTCCATGTTCTGTGAGATGGCTTTCCTCA +
Preference number: 3 (lower is better)
Translates to: GEIPIPWCGRAS*LCPCSVRWLSS
Trigger: TGAGGAAAGCCATCTCACAGAACATGGACATAGGCAACTTGCTCTCCCACACCAAGGGATGGGAATCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATACCTTTCCCCAGCATATaGCAAAAAGCTCTCCAGTGC +
Preference number: 3 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIPFPSI*QKALQC
Trigger: GCACTGGAGAGCTTTTTGCAATATGCTGGGGAAAGG...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 72 bp TTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTaGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGG +
Preference number: 3 (lower is better)
Translates to: FFPRPRVPSVSI*SCSEMLVVGFR
Trigger: CCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCGTGAAATGCTGGTGGTaGGTTTTAGGTTGGGGAAAA +
Preference number: 3 (lower is better)
Translates to: KCQALCCWFELDTLLRLLVKCWW*VLGWGK
Trigger: TTTTCCCCAACCTAAAACCAACCACCAGCATTTCAC...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 72 bp TTTCCTCATAGATGGATGGGAAAATGTCAGGCTCTTTaGTGCTGGTTTGAATTGGACACACTGCTGCGGCTC +
Preference number: 3 (lower is better)
Translates to: FPHRWMGKCQAL*CWFELDTLLRL
Trigger: GAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTTTCCCATCCATCTATGAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CCA 72 bp ATGACTATAGGTAGGAGAGATTCCCATCCCTTGGTGTaGGAGAGCAAGTTGCCTATGTCCATGTTCTGTGAG +
Preference number: 3 (lower is better)
Translates to: MTIGRRDSHPLV*ESKLPMSMFCE
Trigger: CTCACAGAACATGGACATAGGCAACTTGCTCTCCCACACCAAGGGATGGGAATCTCTCCTACCTATAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR TCA 72 bp GGTGTGGGAGAGCAAGTTGCCTATGTCCATGTTCTGTaGGATGGCTTTCCTCATAGATGGATGGGAAAATGT +
Preference number: 3 (lower is better)
Translates to: GVGEQVAYVHVL*DGFPHRWMGKC
Trigger: ACATTTTCCCATCCATCTATGAGGAAAGCCATCTCACAGAACATGGACATAGGCAACTTGCTCTCCCACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR GCA 72 bp AACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTaGTTTTCTTGTTTGAAGGAACCAAGAGGGGCTCTG +
Preference number: 3 (lower is better)
Translates to: NQGWKCTPVRRY*FSCLKEPRGAL
Trigger: CAGAGCCCCTCTTGGTTCCTTCAAACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTTCCAGTGCTAAGGCATaGGCAGGGTGTGTAAACAGC +
Preference number: 3 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVSSAKA*AGCVNS
Trigger: GCTGTTTACACACCCTGCCAATGCCTTAGCACTGGA...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR TCA 72 bp TTCACAGGCAATGATGGGTTTGTGTGTATGGTGTCATaGGATCCTCTACCTCATAACAAAAGGACAGTGGGT +
Preference number: 3 (lower is better)
Translates to: FTGNDGFVCMVS*DPLPHNKRTVG
Trigger: ACCCACTGTCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCATTGCCTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR TCA 72 bp CTGATGGATATCCACTGGGAGCACTTCATCCTGTTCTaGCAGCTTGATAACATTCCTGTTATAACCAAGGAT +
Preference number: 3 (lower is better)
Translates to: LMDIHWEHFILF*QLDNIPVITKD
Trigger: ATCCTTGGTTATAACAGGAATGTTATCAAGCTGTCAGAACAGGATGAAGTGCTCCCAGTGGATATCCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR-3UTR CAA 90 bp ATGATGGGTTTGTGTGTATGGTGTCATGAGATCCTCTACCTCATAACAAAAGGAGTGAAATGCTGGTGGTaGGTTTTAGGTTGGGGAAAA +
Preference number: 3 (lower is better)
Translates to: MMGLCVWCHEILYLITKGVKCWW*VLGWGK
Trigger: TTTTCCCCAACCTAAAACCAACCACCAGCATTTCAC...TCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCCCCCGCGCAGGGCCTTaGGCCGGTTCTTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVPRAGP*AGSCRR
Trigger: CCTGCGGCAAGAACCGGCTCAAGGCCCTGCGCGGGG...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCCGAGCAGTTGCAGGGTaGAGTCTGGGGGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVRAVAG*SLGAPG
Trigger: CCCCGGTGCCCCCAGACTGCACCCTGCAACTGCTCG...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCGACTGCCGCTCTCGCTaGACAGCAGCTCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVDCRSR*TAAPAP
Trigger: GGGCGCTGGAGCTGCTGTCCAGCGAGAGCGGCAGTC...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCTTAGGCTGGCGGCGTTaGGCGGGTACGAGCGGCGAT +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVLGWRR*AGTSGD
Trigger: ATCGCCGCTCGTACCCGCTCAACGCCGCCAGCCTAA...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCGCTGATGGCCCCCAGTaGGGCCGCATGGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVADGPQ*GRMDSR
Trigger: CCTACTGTCCATGCGGCCTCACTGGGGGCCATCAGC...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCGCCAGCCACAGCAGGTaGTCGTCCACCAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVASHSR*SSTSIR
Trigger: CCTGATGCTGGTGGACGAGCACCTGCTGTGGCTGGC...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCGGCAGCCGATCCCCCTaGAACACCACTTGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVGSRSP*NTTWRR
Trigger: CCTACGCCAAGTGGTGTTCCAGGGGGATCGGCTGCC...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTGGGTATACCACGGGGTaGAGCCCTGCCCCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCGYTTG*SPAPAP
Trigger: GGGCGCCGGGGCAGGGCTGCACCCCGTGGTATACCC...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTCGAGGTTTCCCCGGGTaGCCGCCGGCTCCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCRGFPG*PPAPAL
Trigger: GAGAGCCGGAGCCGGCGGGCACCCGGGGAAACCTCG...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCGTCACTGGTCCGCTCTaGCTTTCGGGATGGGACAGC +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVVTGPL*LSGWDS
Trigger: GCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGAC...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCCGTTGCCCAGGTAGCTaGCAGAGCACTGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVRCPGS*QSTGRA
Trigger: TGCCCTTCCAGTGCTCTGCCAGCTACCTGGGCAACG...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTCGGGGCAGCCAGCGCTaGGACACTGCCAGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCRGSQR*DTARAP
Trigger: CGGGGCTCTGGCAGTGTCCCAGCGCTGGCTGCCCCG...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCTGGGGAGGGTGCACCTaGGATGTGCTGTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVWGGCT*DVLCPF
Trigger: GAAAGGGCACAGCACATCCCAGGTGCACCCTCCCCA...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGCGGGCAGCTCCCAGCTaGGCGGCCGGAGTCTCAGCG +
Preference number: 4 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGRAAPS*AAGVSA
Trigger: CGCTGAGACTCCGGCCGCGCAGCTGGGAGCTGCCCG...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCGGGCAGCTCCCAGCTaGGCGGCCGGAGTCTCAGCG +
Preference number: 4 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVRAAPS*AAGVSA
Trigger: CGCTGAGACTCCGGCCGCGCAGCTGGGAGCTGCCCG...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCGGAGGTCCCCGCCGCTaGACACCACCCTCCGCCGAG +
Preference number: 4 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVGGPRR*TPPSAE
Trigger: CTCGGCGGAGGGTGGTGTGCAGCGGCGGGGACCTCC...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCCGATCTCCACCTTCTTaGTGGCGTTGCCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVRSPPS*WRCLGP
Trigger: TGGCCCAAGGCAACGCCAGCAAGAAGGTGGAGATCG...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGGCTGCGGCGCTGGCCTaGCCGGCCCGCCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGAAALA*PARLRK
Trigger: CTTTCTGAGGCGGGCCGGGCAGGCCAGCGCCGCAGC...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCTTGAATTGGACACACTaGTGCGGCTCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVLNWTH*CGSSCR
Trigger: CCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAA...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCCCATCCAGAGCAGCGTaGATAGGGAGGAGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVPSRAA*IGRSSA
Trigger: TGCACTACTCCTCCCTATCCACGCTGCTCTGGATGG...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGCCCAGAGCCAGCGGATaGCCGCTGCTGCCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGPRASG*PLLPLG
Trigger: CCCAAGCGGCAGCAGCGGCCATCCGCTGGCTCTGGG...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCAAAGCGGCGCGGCGCTaGTGTCGCTGCCCTCGGACG +
Preference number: 4 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVKAARR*CRCPRT
Trigger: CGTCCGAGGGCAGCGACACCAGCGCCGCGCCGCTTT...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTAGGGGAACGAGCCGCGTaGCCAGCCCGTCTACCGCGT +
Preference number: 4 (lower is better)
Translates to: PFLGGHRQSDCPGLDGNVGERAA*PARLPR
Trigger: ACGCGGTAGACGGGCTGGCCACGCGGCTCGTTCCCC...TACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCGATCTAGGCAGGGGCTaGGCTGAAATCAGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVDLGRG*AEISRG
Trigger: CCCTCTACTGATTTCAGCCCAGCCCCTGCCTAGATC...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CAA 72 bp CTCCTCTGCCTCCAACCTGCTGACTACGGAGACACCTaGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGT +
Preference number: 4 (lower is better)
Translates to: LLCLQPADYGDT*EGPEERGNEPR
Trigger: ACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTCTCCGTAGTCAGCAGGTTGGAGGCAGAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTGAGTTCGGGGCCACCTaGAGTCCCCGCGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCEFGAT*SPRGCW
Trigger: CCAACAACCGCGGGGACTTCAGGTGGCCCCGAACTC...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGTGCCCTCGGACGGCGTaGGCATGGGCTCGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPCPRTA*AWARLP
Trigger: TGGAAGGCGAGCCCATGCTCACGCCGTCCGAGGGCA...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGGGCAGTGCAGGGCGCTaGCATTGGGCTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPGSAGR*HWAGWS
Trigger: GCTCCAGCCAGCCCAATGTCAGCGCCCTGCACTGCC...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTGGGCCATGGACACGGTaGACTCCCACTCGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCGPWTR*TPTRLR
Trigger: CCTCAGGCGAGTGGGAGTGCACCGTGTCCATGGCCC...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGCCCGACGCCCGTGGTaGACGTTGTTGGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGARRPW*TLLGWR
Trigger: CCGCCACCCCAACAACGTGCACCACGGGCGTCGGGC...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGCCGGGCTGTTGCGGCTaGTGCCCAGGTAGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGPGCCG*CPGSCR
Trigger: CCGACAGCTACCTGGGCAGCAGCCGCAACAGCCCGG...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCTCTCCAAACACCACCTaGAGCTTTCTGGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVSPNTT*SFLGHH
Trigger: ATGGTGCCCCAGAAAGCTGCAGGTGGTGTTTGGAGA...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTATGCTGCGGCTCCTCCTaGAGGCCTGAGGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PFLGGHRQSDCPGLDGNVCCGSS*RPEGAS
Trigger: GGAAGCCCCCTCAGGCCTGCAGGAGGAGCCGCAGCA...TACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCAGCGGAAGCGGAGCTaGTGGTCAGCTGGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVQRKRS*WSAGGS
Trigger: CGAGCCCCCAGCTGACCAGCAGCTCCGCTTCCGCTG...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGACGCTGGGCGCTGGGCTaGGACCTAGCGGATCGCGCC +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWRRWALG*DLADRA
Trigger: GGCGCGATCCGCTAGGTCCCAGCCCAGCGCCCAGCG...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGACGCCGCTCAGCCCCTTaGGCCGCTCCCCCGAGCACT +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWRRRSAP*AAPPST
Trigger: AGTGCTCGGGGGAGCGGCCCAAGGGGCTGAGCGGCG...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGTGCGCCCGACGCCCGTaGTGCACGTTGTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPCARRP*CTLLGW
Trigger: CCACCCCAACAACGTGCACCACGGGCGTCGGGCGCA...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACCCGCGCGGTGTCCCTTaGCCCGGCTCTTGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHPRGVP*PGSCAP
Trigger: GGGCGCACAAGAGCCGGGCCAAGGGACACCGCGCGG...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCTCCCATCCCTTGGTGTaGGAGAGCAAGTTGCCTATG +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVSHPLV*ESKLPM
Trigger: CATAGGCAACTTGCTCTCCCACACCAAGGGATGGGA...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCCATTGCGGAGCCCCGTaGTCTTGTTATTGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVHCGAP*SCYCSR
Trigger: TCTTGAGCAATAACAAGATCACGGGGCTCCGCAATG...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGGGCCTCCTGGAGGCTaGCCAGGGCCTGAGCATGCA +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGGPPGG*PGPEHA
Trigger: TGCATGCTCAGGCCCTGGGCAGCCTCCAGGAGGCCC...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGCACCCACGATGCGGCTaGAGGCCTTGTCCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGHPRCG*RPCPRA
Trigger: AGCGCGAGGACAAGGCCTGCAGCCGCATCGTGGGTG...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCCGTACAAGCAGCTaGACACCACCCGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SLGLPQGKRPASPALLLPPRTSS*TPPGAA
Trigger: GGCTGCCCCGGGTGGTGTGCAGCTGCTTGTACGGGG...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACTTGGCCCGGCTCTTGTaGGCCCGACGCCCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHLARLL*ARRPWC
Trigger: GCACCACGGGCGTCGGGCGCACAAGAGCCGGGCCAA...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTACAGGGGCTCGGTTGTaGTACCAGCGGATGCGGGTG +
Preference number: 4 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCTGARL*YQRMRV
Trigger: CACCCGCATCCGCTGGTACCACAACCGAGCCCCTGT...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACGTGGGAGTAGTCCCCTaGCTCCCAGCGGCCGGCACG +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHVGVVP*LPAAGT
Trigger: CGTGCCGGCCGCTGGGAGCCAGGGGACTACTCCCAC...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGCCTTGTCCTCGCGCTaGGCCAGCCACAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGALSSR*ASHSRC
Trigger: GCACCTGCTGTGGCTGGCCCAGCGCGAGGACAAGGC...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTCCCCGCAGGCCCACATaGCCAAGTACAGGAAGTGCG +
Preference number: 4 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCPRRPT*PSTGSA
Trigger: CGCACTTCCTGTACTTGGCCATGTGGGCCTGCGGGG...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTAGGGTACGAGCGGCGATaGCTCTCCTTCTCCAGCGCG +
Preference number: 4 (lower is better)
Translates to: PFLGGHRQSDCPGLDGNVGYERR*LSFSSA
Trigger: CGCGCTGGAGAAGGAGAGCCATCGCCGCTCGTACCC...TACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGACTACGGAGACACCTTaGAGGGCCCCGAGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPTTETP*RAPRSG
Trigger: CCCGCTCCTCGGGGCCCTCCAAGGTGTCTCCGTAGT...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTGGGAACATCCGCCTGTaGGCTTCCTCCAGCCATCGG +
Preference number: 4 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCGNIRL*ASSSHR
Trigger: CCGATGGCTGGAGGAAGCCCACAGGCGGATGTTCCC...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGAGGGCTCGGGCTCAGGTaGGGGGTTCTGGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWRGLGLR*GVLARA
Trigger: AGCCCTGGCCAGAACCCCCCACCTGAGCCCGAGCCC...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR TCA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGGGCGTAGGGACGGGATaGGGTGGTGTGTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPGVGTG*GGVCAA
Trigger: AGCTGCACACACACCACCTCATCCCGTCCCTACGCC...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGCCAGGGGCACTGAGGTaGAGGGATACTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGPGALR*RDTAGR
Trigger: CCTGCCTGCAGTATCCCTTCACCTCAGTGCCCCTGG...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCTACACGCGCAGCTGGTaGGCCAGGGTCAGCGCATTG +
Preference number: 4 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVYTRSW*ARVSAL
Trigger: CAATGCGCTGACCCTGGCTCACCAGCTGCGCGTGTA...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGGGGGTGCCCTCCAGGTaGGCTCCTTATGGAGCACTC +
Preference number: 4 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGGVPSR*APYGAL
Trigger: GAGTGCTCCATAAGGAGCTCACCTGGAGGGCACCCC...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACCCGCGCCCATCAGGGTaGCGTCGTCGTACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHPRPSG*RRRTCP
Trigger: GGGGCAAGTACGACGACGTCACCCTGATGGGCGCGG...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGGCTCCCCCGAGCACTTaGAGCTGCGGATGGATAGCG +
Preference number: 4 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGAPPST*SCGWIA
Trigger: CGCTATCCATCCGCAGCTGCAAGTGCTCGGGGGAGC...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGAGGAGGATGCCCGCCTaGTCATCACCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGRRMPA*SSPSTG
Trigger: CCCTGTGGAGGGTGATGAGCAGGCGGGCATCCTCCT...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCTCTCGGCCAGGAGGATaGCCGCCTGCTCATCACCCT +
Preference number: 4 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVSRPGG*PPAHHP
Trigger: AGGGTGATGAGCAGGCGGGCATCCTCCTGGCCGAGA...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGACCAGGGCACCCACGATaGGGCTGCAGGCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGPGHPR*GCRPCP
Trigger: AGGACAAGGCCTGCAGCCGCATCGTGGGTGCCCTGG...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGGCAGCAGCAAGGCCGTaGAGGGGTATACCACGGGGT +
Preference number: 4 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPAAARP*RGIPRG
Trigger: ACCCCGTGGTATACCCCTGCACGGCCTTGCTGCTGC...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACCCTCCAGGGAGGCCCTaGTGTTGCCCGCCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHPPGRP*CCPPWG
Trigger: ACCCCAAGGCGGGCAACAGCAGGGCCTCCCTGGAGG...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTGCCAAGTACAGGAAGTaGGTGGTCACCAGCGCCCCT +
Preference number: 4 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCAKYRK*VVTSAP
Trigger: AGGGGCGCTGGTGACCACGCACTTCCTGTACTTGGC...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACCCCCGTACAAGCAGCTaGACACCACCCGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHPRTSS*TPPGAA
Trigger: GGCTGCCCCGGGTGGTGTGCAGCTGCTTGTACGGGG...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTCGAGGTTTCCCCGGGTaGCCGCCGGCTCCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPRGFPG*PPAPAL
Trigger: GAGAGCCGGAGCCGGCGGGCACCCGGGGAAACCTCG...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCTGTGGGAGAGCAAGTTaGCTATGTCCATGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVCGRAS*LCPCSV
Trigger: CACAGAACATGGACATAGGCAACTTGCTCTCCCACA...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGAGCGGCCGGCCAGTCCTaGCCTTCTCTTGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWRAAGQS*PSLATL
Trigger: CAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGC...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGCGGAAGACGAGCAGTTaGAGGGTGCAGTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGRKTSS*RVQSGG
Trigger: GCCCCCAGACTGCACCCTGCAACTGCTCGTCTTCCG...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CCA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCAGAGCCAGCGGATaGCCGCTGCTGCCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVPRASG*PLLPLG
Trigger: CCCAAGCGGCAGCAGCGGCCATCCGCTGGCTCTGGG...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGATTGTTGGGGTGGCGGTaGGCGAGGTTTCCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGLLGWR*ARFPRV
Trigger: CACCCGGGGAAACCTCGCCCACCGCCACCCCAACAA...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTCCGCGCGGTGTCCCTTaGCCCGGCTCTTGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPPRGVP*PGSCAP
Trigger: GGGCGCACAAGAGCCGGGCCAAGGGACACCGCGCGG...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGGGGAACATCCGCCTGTaGGCTTCCTCCAGCCATCGG +
Preference number: 4 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGGNIRL*ASSSHR
Trigger: CCGATGGCTGGAGGAAGCCCACAGGCGGATGTTCCC...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGACCCAGTGAGGCCGCATaGACAGTAGGCGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGPSEAA*TVGGVG
Trigger: TCCCACCCCGCCTACTGTCCATGCGGCCTCACTGGG...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGGAGCTGCCTTTCACGTaGCCCCACCCTCCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGELPFT*PHPPLL
Trigger: CAAGAGGGGAGGGTGGGGCCACGTGAAAGGCAGCTC...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTAAGCACCGCCAGTCACTaGTCCGCTCTGCCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: PFLGGHRQSDCPGLDGNVSTASH*SALPFG
Trigger: CCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCT...TACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CAA 72 bp CCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTaGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCT +
Preference number: 4 (lower is better)
Translates to: PASPALLLPPCM*KSPKRICPVPP
Trigger: AGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp CTGGGATGTGCTGTGCCCTTTCACACAGACGGAGGCCTTCCCCGTTCCTGGGAGGCCCACACGCCGATGTaGGACAGCGTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LGCAVPFHTDGGLPRSWEAHTPM*DSVSSL
Trigger: CAGTGAGCTGACGCTGTCTCACATCGGCGTGTGGGC...CTCCCAGGAACGGGGAAGGCCTCCGTCTGTGTGAAAGGGCACAGCACATCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACGGCGCTCAGCTCCACTaGGATGTGCTGGGCATGGGG +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHGAQLH*DVLGMG
Trigger: CCCCATGCCCAGCACATCTCAGTGGAGCTGAGCGCC...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315215.11
CDS-3UTR TCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGGGGTGCCCTCCAGGTaGGCTCCTTATGGAGCACTC +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGGVPSR*APYGAL
Trigger: GAGTGCTCCATAAGGAGCTCACCTGGAGGGCACCCC...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTCTGCCTCCAACCTGCTaGCTACGGAGACACCTTGGA +
Preference number: 4 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCLPPTC*LRRHLG
Trigger: TCCAAGGTGTCTCCGTAGTCAGCAGGTTGGAGGCAG...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTGAGGCCAGAGTGATGTaGAGACTGGGAGGGAACCCT +
Preference number: 4 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCEARVM*RLGGNP
Trigger: AGGGTTCCCTCCCAGTCTTCACATCACTCTGGCCTC...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCGTGTGTATGGTGTCATaGGATCCTCTACCTCATAAC +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVVCMVS*DPLPHN
Trigger: GTTATGAGGTAGAGGATCTCATGACACCATACACAC...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGACCGAGCACTTGCAGCTaGGGATGGATAGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGPSTCS*GWIAGS
Trigger: GCTGCCCGCTATCCATCCGCAGCTGCAAGTGCTCGG...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTAGGGCCTCCTGGAGGCTaGCCAGGGCCTGAGCATGCA +
Preference number: 4 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVGPPGG*PGPEHA
Trigger: TGCATGCTCAGGCCCTGGGCAGCCTCCAGGAGGCCC...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACGGGCCATGGACACGGTaGACTCCCACTCGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHGPWTR*TPTRLR
Trigger: CCTCAGGCGAGTGGGAGTGCACCGTGTCCATGGCCC...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGCCTTCTTGCTGGCGTTaGCTTGGGCCATGGACACGG +
Preference number: 4 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPPSCWR*LGPWTR
Trigger: CCGTGTCCATGGCCCAAGGCAACGCCAGCAAGAAGG...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CTGGGATGTGCTGTGCCCTTTCACACAGACGGAGGCCTTCCCCGTTCCTGGGAGGCCAGCCACAGCAGGTaGTCGTCCACCAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: LGCAVPFHTDGGLPRSWEASHSR*SSTSIR
Trigger: CCTGATGCTGGTGGACGAGCACCTGCTGTGGCTGGC...CTCCCAGGAACGGGGAAGGCCTCCGTCTGTGTGAAAGGGCACAGCACATCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACCACCCACGATGCGGCTaGAGGCCTTGTCCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHHPRCG*RPCPRA
Trigger: AGCGCGAGGACAAGGCCTGCAGCCGCATCGTGGGTG...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCAGGGTATACCACGGGGTaGAGCCCTGCCCCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSGYTTG*SPAPAP
Trigger: GGGCGCCGGGGCAGGGCTGCACCCCGTGGTATACCC...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGTTCTTGCGGAGGGGGTaGCCTCCAGGTGAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGFLRRG*PPGELL
Trigger: AAGGAGCTCACCTGGAGGGCACCCCCTCCGCAAGAA...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTAGCTACCCCAGAGGGATaGCCTCTAGGCAAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PFLGGHRQSDCPGLDGNVATPEG*PLGKWG
Trigger: TCCCCACTTGCCTAGAGGGCATCCCTCTGGGGTAGC...TACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCACCGACAGTCAGACTaGCCCGGGCTGGACGGAAAT +
Preference number: 4 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVHRQSD*PGLDGN
Trigger: ATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTG...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTGGGATGTGCTGTGCCCTTTCACACAGACGGAGGCCTTCCCCGTTCCTGGGAGGAAGGCGCCAAGGCTTaGACGCCACACCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LGCAVPFHTDGGLPRSWEEGAKA*TPHQPA
Trigger: TGCTGGCTGGTGTGGCGTCCAAGCCTTGGCGCCTTC...CTCCCAGGAACGGGGAAGGCCTCCGTCTGTGTGAAAGGGCACAGCACATCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGATTGTTGGGGTGGCGGTaGGCGAGGTTTCCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWRLLGWR*ARFPRV
Trigger: CACCCGGGGAAACCTCGCCCACCGCCACCCCAACAA...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGATGCACGTTGTTGGGGTaGCGGTGGGCGAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGCTLLG*RWARFP
Trigger: GGGAAACCTCGCCCACCGCCACCCCAACAACGTGCA...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTAGACTGCCGCTCTCGCTaGACAGCAGCTCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVDCRSR*TAAPAP
Trigger: GGGCGCTGGAGCTGCTGTCCAGCGAGAGCGGCAGTC...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGCCAGGTAGCTGTCGGTaGGGCTGTTGTGCAGACTGC +
Preference number: 4 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPPGSCR*GCCADC
Trigger: GCAGTCTGCACAACAGCCCCACCGACAGCTACCTGG...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGAGGGTACGAGCGGCGATaGCTCTCCTTCTCCAGCGCG +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWRGYERR*LSFSSA
Trigger: CGCGCTGGAGAAGGAGAGCCATCGCCGCTCGTACCC...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GGAATGGTGGCATTGTTCCTAGTTGTGCCCGGTTCCCACTCCCCTCCCCCAGGACCCAGTGAGGCCGCATaGACAGTAGGCGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GMVALFLVVPGSHSPPPGPSEAA*TVGGVG
Trigger: TCCCACCCCGCCTACTGTCCATGCGGCCTCACTGGG...TCCTGGGGGAGGGGAGTGGGAACCGGGCACAACTAGGAACAATGCCACCATTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACCATTGGGCCTCCCGGTaGTGCAGCGGAAGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHHWASR*CSGSGA
Trigger: AGCTCCGCTTCCGCTGCACCACCGGGAGGCCCAATG...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR TCA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGGCGCATTGGAGGCATTaGTGGGCATCAGCACGAAGG +
Preference number: 4 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPAHWRH*WASARR
Trigger: CCTTCGTGCTGATGCCCATCAATGCCTCCAATGCGC...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACAGGAGTAGTGCAGGGTaGTGCCCACCGCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHRSSAG*CPPPGR
Trigger: TCTGCCAGGCGGTGGGCATCACCCTGCACTACTCCT...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp CTGGGATGTGCTGTGCCCTTTCACACAGACGGAGGCCTTCCCCGTTCCTGGGAGAGCAAGAAGGGAACCTaGGTCACTCAGGAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LGCAVPFHTDGGLPRSWESKKGT*VTQEGA
Trigger: GGCCCCCTCCTGAGTGACTCAGGTTCCCTTCTTGCT...CTCCCAGGAACGGGGAAGGCCTCCGTCTGTGTGAAAGGGCACAGCACATCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTCCGCGCCCATCAGGGTaGCGTCGTCGTACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPPRPSG*RRRTCP
Trigger: GGGGCAAGTACGACGACGTCACCCTGATGGGCGCGG...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GGAATGGTGGCATTGTTCCTAGTTGTGCCCGGTTCCCACTCCCCTCCCCCAGGAAGGCGCTCAGCTCCATaGGCACGGCCACATTGCCCA +
Preference number: 4 (lower is better)
Translates to: GMVALFLVVPGSHSPPPGRRSAP*ARPHCP
Trigger: TGGGCAATGTGGCCGTGCTCATGGAGCTGAGCGCCT...TCCTGGGGGAGGGGAGTGGGAACCGGGCACAACTAGGAACAATGCCACCATTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR GCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCAGGAAGGCGCCCGGCTaGACTGTGCTGATGATGTTG +
Preference number: 4 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVRKAPG*TVLMML
Trigger: CAACATCATCAGCACAGTGCAGCCGGGCGCCTTCCT...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCAGTGTGTTCCGACAGCTaGAGGGAGCGATTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SLGLPQGKRPASPALLLPVCSDS*RERFWA
Trigger: GGCCCAGAATCGCTCCCTGCAGCTGTCGGAACACAC...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGAATGGTGGCATTGTTCCTAGTTGTGCCCGGTTCCCACTCCCCTCCCCCAGGAATGAGGTGGTGTGTGTaGAGCTCCAGGGCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: GMVALFLVVPGSHSPPPGMRWCV*SSRAPS
Trigger: CGAGGGGGCCCTGGAGCTGCACACACACCACCTCAT...TCCTGGGGGAGGGGAGTGGGAACCGGGCACAACTAGGAACAATGCCACCATTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTACGATCTCCACCTTCTTaGTGGCGTTGCCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PFLGGHRQSDCPGLDGNVRSPPS*WRCLGP
Trigger: TGGCCCAAGGCAACGCCAGCAAGAAGGTGGAGATCG...TACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGATTCTTGCGGAGGGGGTaGCCTCCAGGTGAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGFLRRG*PPGELL
Trigger: AAGGAGCTCACCTGGAGGGCACCCCCTCCGCAAGAA...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTATTATGCGTGTTCCTCCAGGGAGGCCCTaGTGTTGCCCGCCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: RAPTVRLPRAGRKCIMRVPPGRP*CCPPWG
Trigger: ACCCCAAGGCGGGCAACAGCAGGGCCTCCCTGGAGG...AACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCACCAGCGCTGGGACACTaGCAGAGCCCCGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSPALGH*QSPAGP
Trigger: TGGGCCTGCGGGGCTCTGGCAGTGTCCCAGCGCTGG...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCAGCCCGACGCCCGTGGTaGACGTTGTTGGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSARRPW*TLLGWR
Trigger: CCGCCACCCCAACAACGTGCACCACGGGCGTCGGGC...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CTGGGATGTGCTGTGCCCTTTCACACAGACGGAGGCCTTCCCCGTTCCTGGGAGGGCTGTTGTGCAGACTaGCGCTCTCGCTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: LGCAVPFHTDGGLPRSWEGCCAD*RSRWTA
Trigger: TGCTGTCCAGCGAGAGCGGCAGTCTGCACAACAGCC...CTCCCAGGAACGGGGAAGGCCTCCGTCTGTGTGAAAGGGCACAGCACATCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGAGTACTTGGGGAGGGTaGACCTGGGATGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPSTWGG*TWDVLC
Trigger: GCACAGCACATCCCAGGTGCACCCTCCCCAAGTACT...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGAATGGTGGCATTGTTCCTAGTTGTGCCCGGTTCCCACTCCCCTCCCCCAGGATGCCCCAGTTCCACCTaGCCTCTCCCTCTACTCCCC +
Preference number: 4 (lower is better)
Translates to: GMVALFLVVPGSHSPPPGCPSST*PLPLLP
Trigger: GGGGAGTAGAGGGAGAGGGCAGGTGGAACTGGGGCA...TCCTGGGGGAGGGGAGTGGGAACCGGGCACAACTAGGAACAATGCCACCATTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTACGGAGGCAAGGAAGTaGTCTTCCTTAGTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCTEARK*SSLVPW
Trigger: CCACGGGACTAAGGAAGAGCACTTCCTTGCCTCCGT...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCATCCTCTGGAAGGCTGTaGAGGTCAGGCCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: SLGLPQGKRPASPALLLPSSGRL*RSGPRS
Trigger: GCTACGTGGGCCTGACCTGCACAGCCTTCCAGAGGA...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR GCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTCCACGCCACGCCTCTTaGCAGGCCCAGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPPRHAS*QAQQLQ
Trigger: CTGGAGCTGCTGGGCCTGGCAAGAGGCGTGGCGTGG...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGAAGCCTGGGGAGGCCCTaGAAGGTCTCGGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWRSLGRP*KVSEVR
Trigger: TCTCACCTCCGAGACCTTCCAGGGCCTCCCCAGGCT...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGTTAGTCGGAGAAGCCTaGGGAGGCCCTGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGLVGEA*GGPGRS
Trigger: AGACCTTCCAGGGCCTCCCCAGGCTTCTCCGACTAA...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGGAGCATGCAGGGCACTaGGGTAAGCACAGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGEHAGH*GKHRAC
Trigger: ACACGCTCTGTGCTTACCCCAGTGCCCTGCATGCTC...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTAGTCCCCGCGGTTGTTaGCAACACGCTCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPSPRGC*QHARRG
Trigger: GCCCCGCCGAGCGTGTTGCCAACAACCGCGGGGACT...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTGCCTTGTCCTCGCGCTaGGCCAGCCACAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPALSSR*ASHSRC
Trigger: GCACCTGCTGTGGCTGGCCCAGCGCGAGGACAAGGC...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCAGAGATGTGCTGGGCATaGGGGCTGAGGGCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSEMCWA*GLRAAP
Trigger: GGGGGCCGCCCTCAGCCCCCATGCCCAGCACATCTC...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGAGAAGGCGCCAAGGCTTaGACGCCACACCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWREGAKA*TPHQPA
Trigger: TGCTGGCTGGTGTGGCGTCCAAGCCTTGGCGCCTTC...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCAGGGGAACGAGCCGCGTaGCCAGCCCGTCTACCGCGT +
Preference number: 4 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSGERAA*PARLPR
Trigger: ACGCGGTAGACGGGCTGGCCACGCGGCTCGTTCCCC...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTAACTACGGAGACACCTTaGAGGGCCCCGAGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVTTETP*RAPRSG
Trigger: CCCGCTCCTCGGGGCCCTCCAAGGTGTCTCCGTAGT...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTTCGGGGGCAGCTGGATaGAGGCCAGGGCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPSGAAG*RPGPRC
Trigger: ACAGCGTGGCCCTGGCCTCCATCCAGCTGCCCCCGA...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CCA 90 bp AGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTATTATGCGTGTTTTGCAGGGTGCAGTCTaGGGGCACCGGGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RAPTVRLPRAGRKCIMRVLQGAV*GHRGSQ
Trigger: CTGGCTCCCCCGGTGCCCCCAGACTGCACCCTGCAA...AACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000412232.3
3UTR CAA 72 bp CCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTaGTCCCGGTGTGCCACCTCTGAACCCTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PGSQLLRCRASA*SRCATSEPCCL
Trigger: CAGACAGCAGGGTTCAGAGGTGGCACACCGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACCAGCTTCTCCAGCAGTaGCAGTCCCAGGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHQLLQQ*QSQEGA
Trigger: GGCTCCTTCCTGGGACTGTCACTGCTGGAGAAGCTG...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTAGGCGTAGGGACGGGATaGGGTGGTGTGTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVGVGTG*GGVCAA
Trigger: AGCTGCACACACACCACCTCATCCCGTCCCTACGCC...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GGAATGGTGGCATTGTTCCTAGTTGTGCCCGGTTCCCACTCCCCTCCCCCAGGAAGCAAGAAGGGAACCTaGGTCACTCAGGAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GMVALFLVVPGSHSPPPGSKKGT*VTQEGA
Trigger: GGCCCCCTCCTGAGTGACTCAGGTTCCCTTCTTGCT...TCCTGGGGGAGGGGAGTGGGAACCGGGCACAACTAGGAACAATGCCACCATTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCATGCCCTCGGACGGCGTaGGCATGGGCTCGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSCPRTA*AWARLP
Trigger: TGGAAGGCGAGCCCATGCTCACGCCGTCCGAGGGCA...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGATGCCACCCTGCATGTTaGAGTCCCCGAAGCGGATCT +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGCHPAC*SPRSGS
Trigger: AGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCA...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTGGAGGTCCCCGCCGCTaGACACCACCCTCCGCCGAG +
Preference number: 4 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPGGPRR*TPPSAE
Trigger: CTCGGCGGAGGGTGGTGTGCAGCGGCGGGGACCTCC...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGACCTTCTTGCTGGCGTTaGCTTGGGCCATGGACACGG +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWRPSCWR*LGPWTR
Trigger: CCGTGTCCATGGCCCAAGGCAACGCCAGCAAGAAGG...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTATCGGTGGGGCTGTTGTaGAGACTGCCGCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVSVGLL*RLPLSL
Trigger: CAGCGAGAGCGGCAGTCTGCACAACAGCCCCACCGA...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTCGGCGCCCGGGCTGTTaGGGCTGCTGCCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPRRPGC*GCCPGS
Trigger: GCTACCTGGGCAGCAGCCGCAACAGCCCGGGCGCCG...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTGCTGCGGCGCTGGCCTaGCCGGCCCGCCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPAAALA*PARLRK
Trigger: CTTTCTGAGGCGGGCCGGGCAGGCCAGCGCCGCAGC...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCACCTGGGATGTGCTGTaGCCTTTCACACAGACGGAG +
Preference number: 4 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVTWDVL*PFTQTE
Trigger: CTCCGTCTGTGTGAAAGGGCACAGCACATCCCAGGT...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGGGCATGACTAGATTCTaGCCCAGTTCCACCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPGMTRF*PSSTCP
Trigger: AGGGCAGGTGGAACTGGGGCAGAATCTAGTCATGCC...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CTGGGATGTGCTGTGCCCTTTCACACAGACGGAGGCCTTCCCCGTTCCTGGGAGAATTGGACACACTGCTaGGGCTCCTCCTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LGCAVPFHTDGGLPRSWENWTHC*GSSCRP
Trigger: AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATT...CTCCCAGGAACGGGGAAGGCCTCCGTCTGTGTGAAAGGGCACAGCACATCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCCCAGTCCGTAGGTATTaGTTTTCTTGTTTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVPVRRY*FSCLKE
Trigger: TTCCTTCAAACAAGAAAAGCAATACCTACGGACTGG...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTGGCTTCCTGGCCGTGTaGCCGGCACCCCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPGFLAV*PAPLPP
Trigger: GGGAGGGAGGGGTGCCGGGCACACGGCCAGGAAGCC...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR GCA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTAGCCACATTGCCCAAGTaGTGGCAGTGCAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVATLPK*WQCRAL
Trigger: CAGCGCCCTGCACTGCCAGCACTTGGGCAATGTGGC...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACAGGGACGGGATGAGGTaGTGTGTGTGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHRDGMR*CVCSSR
Trigger: CCTGGAGCTGCACACACACCACCTCATCCCGTCCCT...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGCCAGCATCAGGTTGCTaGCCATGTCCACCATCACCT +
Preference number: 4 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGPASGC*PCPPSP
Trigger: AGGTGATGGTGGACATGGCCAGCAACCTGATGCTGG...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGACAGGTGAGCTCCTTATaGAGCACTCGCGCCTTCACG +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGQVSSL*STRAFT
Trigger: CGTGAAGGCGCGAGTGCTCCATAAGGAGCTCACCTG...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCAAGTACAGGAAGTGCGTaGTCACCAGCGCCCCTAGCT +
Preference number: 4 (lower is better)
Translates to: SLGLPQGKRPASPALLLPSTGSA*SPAPLA
Trigger: AGCTAGGGGCGCTGGTGACCACGCACTTCCTGTACT...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGACGGGGCAGCCAGCGCTaGGACACTGCCAGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRRGSQR*DTARAP
Trigger: CGGGGCTCTGGCAGTGTCCCAGCGCTGGCTGCCCCG...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGATGCCCTCTAGGCAAGTaGGGAACATCCGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWRCPLGK*GTSACG
Trigger: CCCACAGGCGGATGTTCCCCACTTGCCTAGAGGGCA...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGCTTGGCTTGAGCTCCTaGGAGTCGGGAAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGLGLSS*ESGSWF
Trigger: AAACCAGCTTCCCGACTCCCAGGAGCTCAAGCCAAG...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGATGGGACAGCAGAAGTaGAGACCCGAGAGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPMGQQK*RPERRS
Trigger: GCTCCTTCTCTCGGGTCTCCACTTCTGCTGTCCCAT...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTAATGGGACAGCAGAAGTaGAGACCCGAGAGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: PFLGGHRQSDCPGLDGNVMGQQK*RPERRS
Trigger: GCTCCTTCTCTCGGGTCTCCACTTCTGCTGTCCCAT...TACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCTCTGCCTTTCGGGATaGGACAGCAGAAGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVLCLSG*DSRSGD
Trigger: GTCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAG...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTCTGGCCAGGGCTTCCTaGCCGTGTGCCCGGCACCCC +
Preference number: 4 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPLARAS*PCARHP
Trigger: GGGGTGCCGGGCACACGGCCAGGAAGCCCTGGCCAG...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR TCA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCAGAGTTCGGGGCCACCTaGAGTCCCCGCGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSEFGAT*SPRGCW
Trigger: CCAACAACCGCGGGGACTTCAGGTGGCCCCGAACTC...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp AGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTATTATGCGTGTTCCAGGGGCACTGAGGTaGAGGGATACTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RAPTVRLPRAGRKCIMRVPGALR*RDTAGR
Trigger: CCTGCCTGCAGTATCCCTTCACCTCAGTGCCCCTGG...AACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCACCCGCCCAGGGGCACTaGGGTGAAGGGATACTGCAG +
Preference number: 4 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSPAQGH*GEGILQ
Trigger: CTGCAGTATCCCTTCACCTCAGTGCCCCTGGGCGGG...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp AGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTATTATGCGTGTTTACACGCGCAGCTGGTaGGCCAGGGTCAGCGCATTG +
Preference number: 4 (lower is better)
Translates to: RAPTVRLPRAGRKCIMRVYTRSW*ARVSAL
Trigger: CAATGCGCTGACCCTGGCTCACCAGCTGCGCGTGTA...AACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATACCCCGCGCAGGGCCTTaGGCCGGTTCTTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIPRAGP*AGSCRR
Trigger: CCTGCGGCAAGAACCGGCTCAAGGCCCTGCGCGGGG...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGAGTCCCTAACCCTCCCTaGTGGATATCCACTGGGAGC +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWRVPNPP*WISTGS
Trigger: GCTCCCAGTGGATATCCATCAGGGAGGGTTAGGGAC...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGACAAACGGTCTGTGGTaGAGCACATCGGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPTNGLW*STSVTF
Trigger: GAAGGTCACCGATGTGCTTCACCACAGACCGTTTGT...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGAAGTTCAGCAGCATGTaGCAGCCTTTCCGGGACACA +
Preference number: 4 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPKFSSM*QPFRDT
Trigger: TGTGTCCCGGAAAGGCTGGCACATGCTGCTGAACTT...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTCCAGCGCTGGGACACTaGCAGAGCCCCGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPPALGH*QSPAGP
Trigger: TGGGCCTGCGGGGCTCTGGCAGTGTCCCAGCGCTGG...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTGCCACCTCTGAACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTCCAGCGGATGGCCGCTaGTGCCGCTTGGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: VPPLNPAVWFKYHSCGNGPADGR*CRLGRT
Trigger: AGTCCTCCCCAAGCGGCAGCAGCGGCCATCCGCTGG...ACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGATTGGCCCGGCTCTTGTaGGCCCGACGCCCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRLARLL*ARRPWC
Trigger: GCACCACGGGCGTCGGGCGCACAAGAGCCGGGCCAA...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATACGGCGCCCGGGCTGTTaGGGCTGCTGCCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIRRPGC*GCCPGS
Trigger: GCTACCTGGGCAGCAGCCGCAACAGCCCGGGCGCCG...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGCCACGCTCTCATCTCTaGTTTGCTGGTGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPPRSHL*FAGEAD
Trigger: ATCAGCCTCACCAGCAAAGCAGAGATGAGAGCGTGG...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCAGAGGTAGGCCTCCAATaGCACGTTCCTCGCATTCAC +
Preference number: 4 (lower is better)
Translates to: SLGLPQGKRPASPALLLPEVGLQ*HVPRIH
Trigger: GTGAATGCGAGGAACGTGGCATTGGAGGCCTACCTC...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATACGCTGGGCGCTGGGCTaGGACCTAGCGGATCGCGCC +
Preference number: 4 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIRWALG*DLADRA
Trigger: GGCGCGATCCGCTAGGTCCCAGCCCAGCGCCCAGCG...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGAGCGTCGCCTGCTCGCTaGGCGCTGGGCTGGGACCTA +
Preference number: 4 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRASPAR*ALGWDL
Trigger: TAGGTCCCAGCCCAGCGCCCAGCGAGCAGGCGACGC...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATACGCCGCTCAGCCCCTTaGGCCGCTCCCCCGAGCACT +
Preference number: 4 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIRRSAP*AAPPST
Trigger: AGTGCTCGGGGGAGCGGCCCAAGGGGCTGAGCGGCG...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTATTATGCGTGTTACAGGGGCTCGGTTGTaGTACCAGCGGATGCGGGTG +
Preference number: 4 (lower is better)
Translates to: RAPTVRLPRAGRKCIMRVTGARL*YQRMRV
Trigger: CACCCGCATCCGCTGGTACCACAACCGAGCCCCTGT...AACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGAGAGATGTGCTGGGCATaGGGGCTGAGGGCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPREMCWA*GLRAAP
Trigger: GGGGGCCGCCCTCAGCCCCCATGCCCAGCACATCTC...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACAGTACAGGAAGTGCGTaGTCACCAGCGCCCCTAGCT +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHSTGSA*SPAPLA
Trigger: AGCTAGGGGCGCTGGTGACCACGCACTTCCTGTACT...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTGCCACCTCTGAACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTTGCGCCCGACGCCCGTaGTGCACGTTGTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: VPPLNPAVWFKYHSCGNGCARRP*CTLLGW
Trigger: CCACCCCAACAACGTGCACCACGGGCGTCGGGCGCA...ACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTAAAGCGGCGCGGCGCTaGTGTCGCTGCCCTCGGACG +
Preference number: 4 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPKAARR*CRCPRT
Trigger: CGTCCGAGGGCAGCGACACCAGCGCCGCGCCGCTTT...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGACAGACTGCCCCGGGCTaGACGGAAATGTATTATGCG +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGQTAPG*TEMYYA
Trigger: CGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTG...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTATGGGGAGGGTGCACCTaGGATGTGCTGTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVWGGCT*DVLCPF
Trigger: GAAAGGGCACAGCACATCCCAGGTGCACCCTCCCCA...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGAACCTGCTTCATGTGCTaGGCTAGCTCTCGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWRTCFMC*ASSRAS
Trigger: GCTGGCACGAGAGCTAGCCCAGCACATGAAGCAGGT...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTTGGTTGGTTTTAGGTTaGGGAAAAGACGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCWLVLG*GKDGCW
Trigger: CCAGCACCCGTCTTTTCCCCAACCTAAAACCAACCA...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GGAATGGTGGCATTGTTCCTAGTTGTGCCCGGTTCCCACTCCCCTCCCCCAGGACAGAGGAGCGGGAACTaGGGAATTCTGGCCCTACGT +
Preference number: 4 (lower is better)
Translates to: GMVALFLVVPGSHSPPPGQRSGN*GILALR
Trigger: ACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTG...TCCTGGGGGAGGGGAGTGGGAACCGGGCACAACTAGGAACAATGCCACCATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTCGGAAGCGGAGCTGCTaGTCAGCTGGGGGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPRKRSC*SAGGSG
Trigger: GCCCGAGCCCCCAGCTGACCAGCAGCTCCGCTTCCG...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR TCA 90 bp CCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTACATTGCGGAGCCCCGTaGTCTTGTTATTGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: PFLGGHRQSDCPGLDGNVHCGAP*SCYCSR
Trigger: TCTTGAGCAATAACAAGATCACGGGGCTCCGCAATG...TACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTGCACTCCCACTCGCCTaGGGCCCACACGCCGATGTG +
Preference number: 4 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPALPLA*GPHADV
Trigger: CACATCGGCGTGTGGGCCTCAGGCGAGTGGGAGTGC...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTGCACTCCCACTCGCCTaGGGCCCACACGCCGATGTG +
Preference number: 4 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPALPLA*GPHADV
Trigger: CACATCGGCGTGTGGGCCTCAGGCGAGTGGGAGTGC...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GGAATGGTGGCATTGTTCCTAGTTGTGCCCGGTTCCCACTCCCCTCCCCCAGGATCCCCCAGGACTGGTTaGTGTCTAGAGCTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GMVALFLVVPGSHSPPPGSPRTG*CLELPF
Trigger: GAAAGGCAGCTCTAGACATCAACCAGTCCTGGGGGA...TCCTGGGGGAGGGGAGTGGGAACCGGGCACAACTAGGAACAATGCCACCATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTGCCCAGGGCGGAGGCTaGCACCCCGTACAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPAQGGG*HPVQAA
Trigger: AGCTGCTTGTACGGGGTGGCAGCCTCCGCCCTGGGC...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGAGCCCAGGGCGGAGGCTaGCACCCCGTACAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRAQGGG*HPVQAA
Trigger: AGCTGCTTGTACGGGGTGGCAGCCTCCGCCCTGGGC...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTGCCACCTCTGAACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTGGCTGTTGCGGCTGCTaGCCAGGTAGCTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: VPPLNPAVWFKYHSCGNGGCCGC*PGSCRW
Trigger: CCACCGACAGCTACCTGGGCAGCAGCCGCAACAGCC...ACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTCACCGACAGTCAGACTaGCCCGGGCTGGACGGAAAT +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPHRQSD*PGLDGN
Trigger: ATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTG...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACAGTCAGCTGTTGAGGTaGAGGGCCTCAGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHSQLLR*RASALS
Trigger: GGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACT...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGATTGAATTGGACACACTaGTGCGGCTCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWRLNWTH*CGSSCR
Trigger: CCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAA...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTGGACGGAAATGTATTATGCGTGTTTCTGGGATTGTCTGTCGCTACCCCAGAGGCGTCGCCTGCTCGCTaGGCGCTGGGCTGGGACCTA +
Preference number: 4 (lower is better)
Translates to: LDGNVLCVFLGLSVATPEASPAR*ALGWDL
Trigger: TAGGTCCCAGCCCAGCGCCCAGCGAGCAGGCGACGC...CTCTGGGGTAGCGACAGACAATCCCAGAAACACGCATAATACATTTCCGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGAAGTCCCCGCGGTTGTTaGCAACACGCTCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRSPRGC*QHARRG
Trigger: GCCCCGCCGAGCGTGTTGCCAACAACCGCGGGGACT...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCGCCGCTGCTGCCGCTTaGGGAGGACTTGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KCQALCCWFELDTLLRLLAAAAA*GGLEGG
Trigger: CCCTCCCTCAAGTCCTCCCCAAGCGGCAGCAGCGGC...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTCCAGGTAGCTGTCGGTaGGGCTGTTGTGCAGACTGC +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPPGSCR*GCCADC
Trigger: GCAGTCTGCACAACAGCCCCACCGACAGCTACCTGG...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTGCCACCTCTGAACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTTCATGCAGCCGCCGCTaGCTACCTCCGCGCCCATCA +
Preference number: 4 (lower is better)
Translates to: VPPLNPAVWFKYHSCGNGSCSRR*LPPRPS
Trigger: TGATGGGCGCGGAGGTAGCCAGCGGCGGCTGCATGA...ACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACCAGACTGCCCCGGGCTaGACGGAAATGTATTATGCG +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHQTAPG*TEMYYA
Trigger: CGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTG...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTCTGAACCCTGCTGTCTaGTTTAAGTACCACTCCTGT +
Preference number: 4 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCLNPAV*FKYHSC
Trigger: ACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAG...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTGGGATGTGCTGTGCCCTTTCACACAGACGGAGGCCTTCCCCGTTCCTGGGAGCCTCTGCTTGTGGAGTaGTTGGCATTCCCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: LGCAVPFHTDGGLPRSWEPLLVE*LAFPAV
Trigger: TACTGCTGGGAATGCCAACCACTCCACAAGCAGAGG...CTCCCAGGAACGGGGAAGGCCTCCGTCTGTGTGAAAGGGCACAGCACATCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGATCCCATCCCTTGGTGTaGGAGAGCAAGTTGCCTATG +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGSHPLV*ESKLPM
Trigger: CATAGGCAACTTGCTCTCCCACACCAAGGGATGGGA...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTAACGACAGAGAAACATTaGGCCTCCCGGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVTTEKH*ASRWCS
Trigger: GCTGCACCACCGGGAGGCCCAATGTTTCTCTGTCGT...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR TCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTGGAAGGTCTCGGAGGTaGGACAGCCAATCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPGRSRR*DSQSGC
Trigger: ACAACCGGATTGGCTGTCTCACCTCCGAGACCTTCC...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCCCGCCCAGGGGCACTaGGGTGAAGGGATACTGCAG +
Preference number: 4 (lower is better)
Translates to: KCQALCCWFELDTLLRLLPAQGH*GEGILQ
Trigger: CTGCAGTATCCCTTCACCTCAGTGCCCCTGGGCGGG...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCTTAGGCTGGCGGCGTTaGGCGGGTACGAGCGGCGAT +
Preference number: 4 (lower is better)
Translates to: KCQALCCWFELDTLLRLLLGWRR*AGTSGD
Trigger: ATCGCCGCTCGTACCCGCTCAACGCCGCCAGCCTAA...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCGAGCTGGAGATCAAATaGTTGGGATGGTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVELEIK*LGWFFL
Trigger: GAGGAAGAACCATCCCAATCATTTGATCTCCAGCTC...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTGTCGGGAAGCTGGTTTaGCATTTTGTAGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCVGKLV*HFVGFS
Trigger: AGAGAAACCTACAAAATGTCAAACCAGCTTCCCGAC...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCATCTTTGCTGCTGGTTTaGATTGGACACACTGCTGCG +
Preference number: 4 (lower is better)
Translates to: SLGLPQGKRPASPALLLPSLLLV*IGHTAA
Trigger: CGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGA...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTTGCCACCCTGCATGTTaGAGTCCCCGAAGCGGATCT +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPCHPAC*SPRSGS
Trigger: AGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCA...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTGCCACCTCTGAACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTTCTCGGCCAGGAGGATaGCCGCCTGCTCATCACCCT +
Preference number: 4 (lower is better)
Translates to: VPPLNPAVWFKYHSCGNGSRPGG*PPAHHP
Trigger: AGGGTGATGAGCAGGCGGGCATCCTCCTGGCCGAGA...ACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGACCAGGGCACCCACGATaGGGCTGCAGGCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRPGHPR*GCRPCP
Trigger: AGGACAAGGCCTGCAGCCGCATCGTGGGTGCCCTGG...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCGTTGTGGATGTTGACTaGAGCTGTGATGCCACAGAT +
Preference number: 4 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVVVDVD*SCDATD
Trigger: ATCTGTGGCATCACAGCTGCAGTCAACATCCACAAC...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTGGGAGGCCCTGCTGTTaGCCGCCTTGGGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPGRPCC*PPWGSV
Trigger: CACAGAACCCCAAGGCGGGCAACAGCAGGGCCTCCC...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGAGGGAGGCCCTGCTGTTaGCCGCCTTGGGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRGRPCC*PPWGSV
Trigger: CACAGAACCCCAAGGCGGGCAACAGCAGGGCCTCCC...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTAGTACTTGGGGAGGGTaGACCTGGGATGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPSTWGG*TWDVLC
Trigger: GCACAGCACATCCCAGGTGCACCCTCCCCAAGTACT...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTGCCACCTCTGAACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTTCCCCGAAGCGGATCTaGCCTGTACCCCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VPPLNPAVWFKYHSCGNGSPKRI*PVPPVS
Trigger: GGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGA...ACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATATGGGCCTCCCGGTGGTaGAGCGGAAGCGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIWASRW*SGSGAA
Trigger: AGCAGCTCCGCTTCCGCTGCACCACCGGGAGGCCCA...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR GCA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCGCTCCCTCAGCCCAGTaGCGCAGCGAAACGGCCACT +
Preference number: 4 (lower is better)
Translates to: KCQALCCWFELDTLLRLLAPSAQ*RSETAT
Trigger: AGTGGCCGTTTCGCTGCGGCACTGGGCTGAGGGAGC...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CCA 90 bp GTGCCACCTCTGAACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTAGCCTGGGGAGGCCCTaGAAGGTCTCGGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: VPPLNPAVWFKYHSCGNGSLGRP*KVSEVR
Trigger: TCTCACCTCCGAGACCTTCCAGGGCCTCCCCAGGCT...ACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTATTATGCGTGTTTTAGTCGGAGAAGCCTaGGGAGGCCCTGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: RAPTVRLPRAGRKCIMRVLVGEA*GGPGRS
Trigger: AGACCTTCCAGGGCCTCCCCAGGCTTCTCCGACTAA...AACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCACGTTGCCCAGGTAGCTaGCAGAGCACTGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSRCPGS*QSTGRA
Trigger: TGCCCTTCCAGTGCTCTGCCAGCTACCTGGGCAACG...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTGGGATGTGCTGTGCCCTTTCACACAGACGGAGGCCTTCCCCGTTCCTGGGAGGAGGTCATGGCTATGTaGAAGCACAAGTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LGCAVPFHTDGGLPRSWEEVMAM*KHKFSS
Trigger: GCTGCTGAACTTGTGCTTCCACATAGCCATGACCTC...CTCCCAGGAACGGGGAAGGCCTCCGTCTGTGTGAAAGGGCACAGCACATCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCAGAGGTCATGGCTATGTaGAAGCACAAGTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLGLPQGKRPASPALLLPEVMAM*KHKFSS
Trigger: GCTGCTGAACTTGTGCTTCCACATAGCCATGACCTC...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTAGCCACAGATAATGAGTaGAATCCCTCCAGCGATCAA +
Preference number: 4 (lower is better)
Translates to: PFLGGHRQSDCPGLDGNVATDNE*NPSSDQ
Trigger: TTGATCGCTGGAGGGATTCCACTCATTATCTGTGGC...TACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTATTATGCGTGTTACCTGCTTCATGTGCTaGGCTAGCTCTCGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RAPTVRLPRAGRKCIMRVTCFMC*ASSRAS
Trigger: GCTGGCACGAGAGCTAGCCCAGCACATGAAGCAGGT...AACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACCCACCTGCAGCTTTCTaGGGCACCATTGTTTACAGG +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHPPAAF*GTIVYR
Trigger: CCTGTAAACAATGGTGCCCCAGAAAGCTGCAGGTGG...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTCAGAGGAGCGGGAACTaGGGAATTCTGGCCCTACGT +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPQRSGN*GILALR
Trigger: ACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTG...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACGAGATTCCCATCCCTTaGTGTGGGAGAGCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHEIPIP*CGRASC
Trigger: GCAACTTGCTCTCCCACACCAAGGGATGGGAATCTC...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCAGGTGCAGTCGTGGATaGGGCTCTCGGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: KCQALCCWFELDTLLRLLRCSRG*GSRPGG
Trigger: TCCTCCTGGCCGAGAGCCTCATCCACGACTGCACCT...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTAGGTGCAGTCGTGGATaGGGCTCTCGGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPRCSRG*GSRPGG
Trigger: TCCTCCTGGCCGAGAGCCTCATCCACGACTGCACCT...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGAGCCCACACGCCGATGTaGGACAGCGTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRAHTPM*DSVSSL
Trigger: CAGTGAGCTGACGCTGTCTCACATCGGCGTGTGGGC...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATAGCTGATGGCCCCCAGTaGGGCCGCATGGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIADGPQ*GRMDSR
Trigger: CCTACTGTCCATGCGGCCTCACTGGGGGCCATCAGC...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTCCTCTGGGCTTGGCTTaGGCTCCTGGGAGTCGGGAA +
Preference number: 4 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPPLGLA*APGSRE
Trigger: TTCCCGACTCCCAGGAGCTCAAGCCAAGCCCAGAGG...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GGAATGGTGGCATTGTTCCTAGTTGTGCCCGGTTCCCACTCCCCTCCCCCAGGATCTTTGCTGCTGGTTTaGATTGGACACACTGCTGCG +
Preference number: 4 (lower is better)
Translates to: GMVALFLVVPGSHSPPPGSLLLV*IGHTAA
Trigger: CGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGA...TCCTGGGGGAGGGGAGTGGGAACCGGGCACAACTAGGAACAATGCCACCATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGACCGAGCACTTGCAGCTaGGGATGGATAGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRPSTCS*GWIAGS
Trigger: GCTGCCCGCTATCCATCCGCAGCTGCAAGTGCTCGG...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCGGATGCGGGTGTCGTTaGCCAGGTAGCTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: KCQALCCWFELDTLLRLLGCGCR*PGSWQS
Trigger: GCTCTGCCAGCTACCTGGGCAACGACACCCGCATCC...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CTGGACGGAAATGTATTATGCGTGTTTCTGGGATTGTCTGTCGCTACCCCAGAGGGCTGTTGCGGCTGCTaGCCAGGTAGCTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: LDGNVLCVFLGLSVATPEGCCGC*PGSCRW
Trigger: CCACCGACAGCTACCTGGGCAGCAGCCGCAACAGCC...CTCTGGGGTAGCGACAGACAATCCCAGAAACACGCATAATACATTTCCGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTGCCACCTCTGAACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTAGAGTCCGGTCTTCATaGAGCCGCCGCTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: VPPLNPAVWFKYHSCGNGRVRSS*SRRWLP
Trigger: AGGTAGCCAGCGGCGGCTGCATGAAGACCGGACTCT...ACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTATTATGCGTGTTGGTGCACCTGGGATGTaGTGTGCCCTTTCACACAGA +
Preference number: 4 (lower is better)
Translates to: RAPTVRLPRAGRKCIMRVGAPGM*CALSHR
Trigger: TCTGTGTGAAAGGGCACAGCACATCCCAGGTGCACC...AACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTATCTCCAAACACCACCTaGAGCTTTCTGGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVSPNTT*SFLGHH
Trigger: ATGGTGCCCCAGAAAGCTGCAGGTGGTGTTTGGAGA...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTACGGAGGCAAGGAAGTaGTCTTCCTTAGTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPTEARK*SSLVPW
Trigger: CCACGGGACTAAGGAAGAGCACTTCCTTGCCTCCGT...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGTGTCAGGCTCTTTGCTaGTGGTTTGAATTGGACACA +
Preference number: 4 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPCQALC*WFELDT
Trigger: TGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACA...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTAAATGTCAGGCTCTTTaGTGCTGGTTTGAATTGGAC +
Preference number: 4 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCKCQAL*CWFELD
Trigger: GTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTGCCACCTCTGAACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTAGGGACGGGATGAGGTaGTGTGTGTGCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VPPLNPAVWFKYHSCGNGRDGMR*CVCSSR
Trigger: CCTGGAGCTGCACACACACCACCTCATCCCGTCCCT...ACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCATCTCCACCTTCTTGCTaGCGTTGCCTTGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSSPPSC*RCLGPW
Trigger: CCATGGCCCAAGGCAACGCCAGCAAGAAGGTGGAGA...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTCCAGCATCAGGTTGCTaGCCATGTCCACCATCACCT +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPPASGC*PCPPSP
Trigger: AGGTGATGGTGGACATGGCCAGCAACCTGATGCTGG...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCAAGACAGCAGAGGTCATaGCTATGTGGAAGCACAAGT +
Preference number: 4 (lower is better)
Translates to: SLGLPQGKRPASPALLLPRQQRS*LCGSTS
Trigger: ACTTGTGCTTCCACATAGCCATGACCTCTGCTGTCT...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTGGGATGTGCTGTGCCCTTTCACACAGACGGAGGCCTTCCCCGTTCCTGGGAGGCCACAGATAATGAGTaGAATCCCTCCAGCGATCAA +
Preference number: 4 (lower is better)
Translates to: LGCAVPFHTDGGLPRSWEATDNE*NPSSDQ
Trigger: TTGATCGCTGGAGGGATTCCACTCATTATCTGTGGC...CTCCCAGGAACGGGGAAGGCCTCCGTCTGTGTGAAAGGGCACAGCACATCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGACCCCGCAGGCCCACATaGCCAAGTACAGGAAGTGCG +
Preference number: 4 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRPRRPT*PSTGSA
Trigger: CGCACTTCCTGTACTTGGCCATGTGGGCCTGCGGGG...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCTGCACGTTGTTGGGGTaGCGGTGGGCGAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: KCQALCCWFELDTLLRLLCTLLG*RWARFP
Trigger: GGGAAACCTCGCCCACCGCCACCCCAACAACGTGCA...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTGATCTAGGCAGGGGCTaGGCTGAAATCAGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPDLGRG*AEISRG
Trigger: CCCTCTACTGATTTCAGCCCAGCCCCTGCCTAGATC...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGACTGAACCCTGCTGTCTaGTTTAAGTACCACTCCTGT +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGLNPAV*FKYHSC
Trigger: ACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAG...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTGGGATGTGCTGTGCCCTTTCACACAGACGGAGGCCTTCCCCGTTCCTGGGAGTCTTCCTTAGTCCCGTaGTGTTGTAAGGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: LGCAVPFHTDGGLPRSWESSLVP*CCKAET
Trigger: AGTCTCAGCCTTACAACACCACGGGACTAAGGAAGA...CTCCCAGGAACGGGGAAGGCCTCCGTCTGTGTGAAAGGGCACAGCACATCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGATCTTCCTTAGTCCCGTaGTGTTGTAAGGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGSSLVP*CCKAET
Trigger: AGTCTCAGCCTTACAACACCACGGGACTAAGGAAGA...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGATGGTTGGTTTTAGGTTaGGGAAAAGACGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWRWLVLG*GKDGCW
Trigger: CCAGCACCCGTCTTTTCCCCAACCTAAAACCAACCA...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGACCCTCGGTTTCCATTTaGTCCTGTAGTGAAATGCTG +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGPSVSI*SCSEML
Trigger: CAGCATTTCACTACAGGACCAAATGGAAACCGAGGG...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTATTATGCGTGTTGCTTCCCTCTGCTTGTaGAGTGGTTGGCATTCCCAG +
Preference number: 4 (lower is better)
Translates to: RAPTVRLPRAGRKCIMRVASLCL*SGWHSQ
Trigger: CTGGGAATGCCAACCACTCCACAAGCAGAGGGAAGC...AACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTAACGCTGTTCTTGATGTaGAAGGACGACAGAGAAACA +
Preference number: 4 (lower is better)
Translates to: PFLGGHRQSDCPGLDGNVTLFLM*KDDRET
Trigger: TGTTTCTCTGTCGTCCTTCCACATCAAGAACAGCGT...TACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATAGCGCTGACATTGGGCTaGCTGGAGCGGAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIALTLG*LERSWQ
Trigger: CTGCCAGCTCCGCTCCAGCCAGCCCAATGTCAGCGC...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR TCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATACCTCTGGGCTTGGCTTaGGCTCCTGGGAGTCGGGAA +
Preference number: 4 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIPLGLA*APGSRE
Trigger: TTCCCGACTCCCAGGAGCTCAAGCCAAGCCCAGAGG...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGTGTGTATGGTGTCATaGGATCCTCTACCTCATAAC +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGVCMVS*DPLPHN
Trigger: GTTATGAGGTAGAGGATCTCATGACACCATACACAC...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGCACTTCATCCTGTTCTaGCAGCTTGATAACATTCCT +
Preference number: 4 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPHFILF*QLDNIP
Trigger: AGGAATGTTATCAAGCTGTCAGAACAGGATGAAGTG...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp AGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTATTATGCGTGTTACAAACGGTCTGTGGTaGAGCACATCGGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: RAPTVRLPRAGRKCIMRVTNGLW*STSVTF
Trigger: GAAGGTCACCGATGTGCTTCACCACAGACCGTTTGT...AACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGATCAAAGACCCCAGGTTaGAGACTGGAGAAGATGTTT +
Preference number: 4 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGSKTPG*RLEKMF
Trigger: AAACATCTTCTCCAGTCTGCAACCTGGGGTCTTTGA...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCGTGTGTTCCGACAGCTaGAGGGAGCGATTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KCQALCCWFELDTLLRLLVCSDS*RERFWA
Trigger: GGCCCAGAATCGCTCCCTGCAGCTGTCGGAACACAC...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGATGTGGTACCAGCGGATaGGGGTGTCGTTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRCGTSG*GCRCPG
Trigger: ACCTGGGCAACGACACCCGCATCCGCTGGTACCACA...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTAGCTCCACTGAGATGTaGTGGGCATGGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPSSTEM*WAWGLR
Trigger: CCTCAGCCCCCATGCCCAGCACATCTCAGTGGAGCT...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315215.11
CDS-3UTR GCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACGTTGTGGATGTTGACTaGAGCTGTGATGCCACAGAT +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHVVDVD*SCDATD
Trigger: ATCTGTGGCATCACAGCTGCAGTCAACATCCACAAC...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTCCACGCTCTCATCTCTaGTTTGCTGGTGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPPRSHL*FAGEAD
Trigger: ATCAGCCTCACCAGCAAAGCAGAGATGAGAGCGTGG...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGAATGGTGGCATTGTTCCTAGTTGTGCCCGGTTCCCACTCCCCTCCCCCAGGATGTGGGAGAGCAAGTTaGCTATGTCCATGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: GMVALFLVVPGSHSPPPGCGRAS*LCPCSV
Trigger: CACAGAACATGGACATAGGCAACTTGCTCTCCCACA...TCCTGGGGGAGGGGAGTGGGAACCGGGCACAACTAGGAACAATGCCACCATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGACCCCAGGTTGCAGACTaGAGAAGATGTTTCCAGATA +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWRPQVAD*RRCFQI
Trigger: TATCTGGAAACATCTTCTCCAGTCTGCAACCTGGGG...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTGGACGGAAATGTATTATGCGTGTTTCTGGGATTGTCTGTCGCTACCCCAGAGGGCAGCCGATCCCCCTaGAACACCACTTGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: LDGNVLCVFLGLSVATPEGSRSP*NTTWRR
Trigger: CCTACGCCAAGTGGTGTTCCAGGGGGATCGGCTGCC...CTCTGGGGTAGCGACAGACAATCCCAGAAACACGCATAATACATTTCCGTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGTCATGCAGCCGCCGCTaGCTACCTCCGCGCCCATCA +
Preference number: 4 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLSCSRR*LPPRPS
Trigger: TGATGGGCGCGGAGGTAGCCAGCGGCGGCTGCATGA...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCAGTAGTGAAATGCTGGTaGTTGGTTTTAGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SLGLPQGKRPASPALLLPVVKCW*LVLGWG
Trigger: TCCCCAACCTAAAACCAACCACCAGCATTTCACTAC...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACTGCTTGTGGAGTGGTTaGCATTCCCAGCAGTATCAA +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHCLWSG*HSQQYQ
Trigger: TTGATACTGCTGGGAATGCCAACCACTCCACAAGCA...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGACAGGCTCTTTGCTGCTaGTTTGAATTGGACACACTG +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWRQALCC*FELDTL
Trigger: CAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTG...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTATTATGCGTGTTTTGGACCCTGGGTCCTaGAGTAAAGTCAGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: RAPTVRLPRAGRKCIMRVLDPGS*SKVRSA
Trigger: TGCACTCCTGACTTTACTCCAGGACCCAGGGTCCAA...AACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATAAGCACCGCCAGTCACTaGTCCGCTCTGCCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: SALYPLSPLSLEMRTFLISTASH*SALPFG
Trigger: CCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCT...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATACGGGAGGTGTTGCTGTaGCTGTGGAAGAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIREVLL*LWKRRP
Trigger: TGGCCGCCTCTTCCACAGCCACAGCAACACCTCCCG...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412232.3
3UTR CAA 72 bp GGGCTGGACGGAAATGTATTATGCGTGTTTCTGGGATaGTCTGTCGCTACCCCAGAGGGATGCCCTCTAGGC +
Preference number: 4 (lower is better)
Translates to: GLDGNVLCVFLG*SVATPEGCPLG
Trigger: GCCTAGAGGGCATCCCTCTGGGGTAGCGACAGACAATCCCAGAAACACGCATAATACATTTCCGTCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CAA 72 bp TCTGGTTTAAGTACCACTCCTGTGGGAATGGTGGCATaGTTCCTAGTTGTGCCCGGTTCCCACTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SGLSTTPVGMVA*FLVVPGSHSPP
Trigger: GGGAGGGGAGTGGGAACCGGGCACAACTAGGAACAATGCCACCATTCCCACAGGAGTGGTACTTAAACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GGAATGGTGGCATTGTTCCTAGTTGTGCCCGGTTCCCACTCCCCTCCCCCAGGAAAAAGCAGCACCTTGTaGCTTAACATCACCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GMVALFLVVPGSHSPPPGKSSTL*LNITCF
Trigger: GAAGCAGGTGATGTTAAGTCACAAGGTGCTGCTTTT...TCCTGGGGGAGGGGAGTGGGAACCGGGCACAACTAGGAACAATGCCACCATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTCCGGTGTGCCACCTCTaGACCCTGCTGTCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPPVCHL*TLLSGL
Trigger: TAAACCAGACAGCAGGGTTCAGAGGTGGCACACCGG...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GGAATGGTGGCATTGTTCCTAGTTGTGCCCGGTTCCCACTCCCCTCCCCCAGGAATTGCTTTTCTTGTTTaGAGGAACCAAGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GMVALFLVVPGSHSPPPGIAFLV*RNQEGL
Trigger: GAGCCCCTCTTGGTTCCTTCAAACAAGAAAAGCAAT...TCCTGGGGGAGGGGAGTGGGAACCGGGCACAACTAGGAACAATGCCACCATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATAGGTGAAGCACATCGGTaGCCTTCTCCAGCACCGCCA +
Preference number: 4 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIGEAHR*PSPAPP
Trigger: TGGCGGTGCTGGAGAAGGTCACCGATGTGCTTCACC...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGATGAGGTGGTGTGTGTaGAGCTCCAGGGCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLMRWCV*SSRAPS
Trigger: CGAGGGGGCCCTGGAGCTGCACACACACCACCTCAT...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATATGTGGTACCAGCGGATaGGGGTGTCGTTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SALYPLSPLSLEMRTFLICGTSG*GCRCPG
Trigger: ACCTGGGCAACGACACCCGCATCCGCTGGTACCACA...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGAGGAGGATGCCCGCCTaGTCATCACCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLRRMPA*SSPSTG
Trigger: CCCTGTGGAGGGTGATGAGCAGGCGGGCATCCTCCT...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGGCAGCAGCAAGGCCGTaGAGGGGTATACCACGGGGT +
Preference number: 4 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLAAARP*RGIPRG
Trigger: ACCCCGTGGTATACCCCTGCACGGCCTTGCTGCTGC...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CTGGACGGAAATGTATTATGCGTGTTTCTGGGATTGTCTGTCGCTACCCCAGAGAGAGTCCGGTCTTCATaGAGCCGCCGCTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: LDGNVLCVFLGLSVATPERVRSS*SRRWLP
Trigger: AGGTAGCCAGCGGCGGCTGCATGAAGACCGGACTCT...CTCTGGGGTAGCGACAGACAATCCCAGAAACACGCATAATACATTTCCGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCAGCCATCGGCTCCTCTaGCTCCAACCTGCTGACTAC +
Preference number: 4 (lower is better)
Translates to: KCQALCCWFELDTLLRLLSHRLL*LQPADY
Trigger: GTAGTCAGCAGGTTGGAGGCAGAGGAGCCGATGGCT...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCGACGGAAATGTATTATaGGTGTTTCTGGGATTGTCT +
Preference number: 4 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVDGNVL*VFLGLS
Trigger: AGACAATCCCAGAAACACGCATAATACATTTCCGTC...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTGCCACCTCTGAACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTATCACCTGCTTCATGTaGTGGGCTAGCTCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: VPPLNPAVWFKYHSCGNGITCFM*WASSRA
Trigger: GGCACGAGAGCTAGCCCAGCACATGAAGCAGGTGAT...ACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CTGGACGGAAATGTATTATGCGTGTTTCTGGGATTGTCTGTCGCTACCCCAGAGGTCACTGGTCCGCTCTaGCTTTCGGGATGGGACAGC +
Preference number: 4 (lower is better)
Translates to: LDGNVLCVFLGLSVATPEVTGPL*LSGWDS
Trigger: GCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGAC...CTCTGGGGTAGCGACAGACAATCCCAGAAACACGCATAATACATTTCCGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTGCATTCACTGAGATGTaGTGGGCATGGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPAFTEM*WAWGLR
Trigger: CCTCAGCCCCCATGCCCAGCACATCTCAGTGAATGC...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGAAGCCAATCCGGTTGTTaGAGAGATCTAAACGCTTCA +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWRSQSGC*RDLNAS
Trigger: TGAAGCGTTTAGATCTCTCCAACAACCGGATTGGCT...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTGAGCATGCAGGGCACTaGGGTAAGCACAGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPEHAGH*GKHRAC
Trigger: ACACGCTCTGTGCTTACCCCAGTGCCCTGCATGCTC...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATACGTTGCCTTGGGCCATaGACACGGTGCACTCCCACT +
Preference number: 4 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIRCLGP*TRCTPT
Trigger: AGTGGGAGTGCACCGTGTCCATGGCCCAAGGCAACG...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTTCTCCACCTTCTTGCTaGCGTTGCCTTGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPSPPSC*RCLGPW
Trigger: CCATGGCCCAAGGCAACGCCAGCAAGAAGGTGGAGA...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGAGTGGGAGTAGTCCCCTaGCTCCCAGCGGCCGGCACG +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRVGVVP*LPAAGT
Trigger: CGTGCCGGCCGCTGGGAGCCAGGGGACTACTCCCAC...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTGCCACCTCTGAACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTGCTGCTGGTTTGAATTaGACACACTGCTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: VPPLNPAVWFKYHSCGNGAAGLN*THCCGS
Trigger: GGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGC...ACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCAGAGATTCCCATCCCTTaGTGTGGGAGAGCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSEIPIP*CGRASC
Trigger: GCAACTTGCTCTCCCACACCAAGGGATGGGAATCTC...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCACATTGCCCAAGTGCTaGCAGTGCAGGGCGCTGACA +
Preference number: 4 (lower is better)
Translates to: KCQALCCWFELDTLLRLLTLPKC*QCRALT
Trigger: TGTCAGCGCCCTGCACTGCCAGCACTTGGGCAATGT...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR TCA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCTCCCCCAGGACTGGTTaGTGTCTAGAGCTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: KCQALCCWFELDTLLRLLSPRTG*CLELPF
Trigger: GAAAGGCAGCTCTAGACATCAACCAGTCCTGGGGGA...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTGAGCTGGAGATCAAATaGTTGGGATGGTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPELEIK*LGWFFL
Trigger: GAGGAAGAACCATCCCAATCATTTGATCTCCAGCTC...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGATATGTCCATGTTCTGTaGGATGGCTTTCCTCATAGA +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWRYVHVL*DGFPHR
Trigger: TCTATGAGGAAAGCCATCTCACAGAACATGGACATA...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATAAGGAAGGCGCCCGGCTaGACTGTGCTGATGATGTTG +
Preference number: 4 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIRKAPG*TVLMML
Trigger: CAACATCATCAGCACAGTGCAGCCGGGCGCCTTCCT...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGGCCAAGTACAGGAAGTaGGTGGTCACCAGCGCCCCT +
Preference number: 4 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLAKYRK*VVTSAP
Trigger: AGGGGCGCTGGTGACCACGCACTTCCTGTACTTGGC...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATAAGCCATCGGCTCCTCTaGCTCCAACCTGCTGACTAC +
Preference number: 4 (lower is better)
Translates to: SALYPLSPLSLEMRTFLISHRLL*LQPADY
Trigger: GTAGTCAGCAGGTTGGAGGCAGAGGAGCCGATGGCT...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTGGTGCACCTGGGATGTaGTGTGCCCTTTCACACAGA +
Preference number: 4 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPGAPGM*CALSHR
Trigger: TCTGTGTGAAAGGGCACAGCACATCCCAGGTGCACC...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCATCACCTGCTTCATGTaGTGGGCTAGCTCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: KCQALCCWFELDTLLRLLITCFM*WASSRA
Trigger: GGCACGAGAGCTAGCCCAGCACATGAAGCAGGTGAT...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTAGTCAGCTGTTGAGGTaGAGGGCCTCAGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPSQLLR*RASALS
Trigger: GGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACT...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGAGGCATGACTAGATTCTaGCCCAGTTCCACCTGCCCT +
Preference number: 4 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRGMTRF*PSSTCP
Trigger: AGGGCAGGTGGAACTGGGGCAGAATCTAGTCATGCC...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGAGCGGCCGGCCAGTCCTaGCCTTCTCTTGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRAAGQS*PSLATL
Trigger: CAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGC...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTCCCCAGGTTGCAGACTaGAGAAGATGTTTCCAGATA +
Preference number: 4 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPPQVAD*RRCFQI
Trigger: TATCTGGAAACATCTTCTCCAGTCTGCAACCTGGGG...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGAGGCTCTGCCATTAGTTaGACCCTGGGTCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRGSAIS*TLGPGV
Trigger: TACTCCAGGACCCAGGGTCCAACTAATGGCAGAGCC...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACTGTTATAACCAAGGATaGAAGTGTACACCAGTCCGT +
Preference number: 4 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHCYNQG*KCTPVR
Trigger: ACGGACTGGTGTACACTTCCATCCTTGGTTATAACA...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTTGTACAGCACCCTGGTaGTGTCGTTGGTGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPCTAPW*CRWCRD
Trigger: GTCTCTACACCAACGACATCACCAGGGTGCTGTACA...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGGCGCATTGGAGGCATTaGTGGGCATCAGCACGAAGG +
Preference number: 4 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLAHWRH*WASARR
Trigger: CCTTCGTGCTGATGCCCATCAATGCCTCCAATGCGC...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGCCGGTGTGCCACCTCTaGACCCTGCTGTCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLPVCHL*TLLSGL
Trigger: TAAACCAGACAGCAGGGTTCAGAGGTGGCACACCGG...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp ATGATGGGTTTGTGTGTATGGTGTCATGAGATCCTCTACCTCATAACAAAAGGACCAGCGGATGGCCGCTaGTGCCGCTTGGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: MMGLCVWCHEILYLITKGPADGR*CRLGRT
Trigger: AGTCCTCCCCAAGCGGCAGCAGCGGCCATCCGCTGG...TCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTCCGGGCTGTTGCGGCTaGTGCCCAGGTAGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVPGCCG*CPGSCR
Trigger: CCGACAGCTACCTGGGCAGCAGCCGCAACAGCCCGG...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGAGACGGAAATGTATTATaGGTGTTTCTGGGATTGTCT +
Preference number: 4 (lower is better)
Translates to: TASHWSALPFGMGQQKWRDGNVL*VFLGLS
Trigger: AGACAATCCCAGAAACACGCATAATACATTTCCGTC...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGGAGGGGGCTTCCCTCTaGTTGTGGAGTGGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLEGASL*LWSGWH
Trigger: ATGCCAACCACTCCACAAGCAGAGGGAAGCCCCCTC...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTTGCTGCGGCTCCTCCTaGAGGCCTGAGGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVCCGSS*RPEGAS
Trigger: GGAAGCCCCCTCAGGCCTGCAGGAGGAGCCGCAGCA...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGAATTGGACACACTGCTaGGGCTCCTCCTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLNWTHC*GSSCRP
Trigger: AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATT...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTCTTCTCTTGCCACCCTaGATGTTGAAGTCCCCGAAG +
Preference number: 4 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPLLLPP*MLKSPK
Trigger: CTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAG...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGAACTTGCAGCTGCGGATaGATAGCGGGCAGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRTCSCG*IAGSRA
Trigger: CGCCCGGCTGCCCGCTATCCATCCGCAGCTGCAAGT...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGATGAAGGTGCAGTCGTaGATGAGGCTCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLMKVQS*MRLSAR
Trigger: CCTGGCCGAGAGCCTCATCCACGACTGCACCTTCAT...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTGCCGCTGCTGCCGCTTaGGGAGGACTTGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVAAAAA*GGLEGG
Trigger: CCCTCCCTCAAGTCCTCCCCAAGCGGCAGCAGCGGC...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTATTATGCGTGTTTATTATGCGTGTTTCTaGGATTGTCTGTCGCTACCC +
Preference number: 4 (lower is better)
Translates to: RAPTVRLPRAGRKCIMRVYYACF*DCLSLP
Trigger: GGGTAGCGACAGACAATCCCAGAAACACGCATAATA...AACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATAGCTGCTGGTTTGAATTaGACACACTGCTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIAAGLN*THCCGS
Trigger: GGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGC...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCACTGATGGATATCCACTaGGAGCACTTCATCCTGTTC +
Preference number: 4 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSLMDIH*EHFILF
Trigger: GAACAGGATGAAGTGCTCCCAGTGGATATCCATCAG...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATACTCTGCCTTTCGGGATaGGACAGCAGAAGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: SALYPLSPLSLEMRTFLILCLSG*DSRSGD
Trigger: GTCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAG...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ATGATGGGTTTGTGTGTATGGTGTCATGAGATCCTCTACCTCATAACAAAAGGATGGCTGGAGCGGAGCTaGCAGCCCTCCGAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: MMGLCVWCHEILYLITKGWLERS*QPSEVQ
Trigger: CTGGACCTCGGAGGGCTGCCAGCTCCGCTCCAGCCA...TCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR TCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGACCTCTACCAGCTCTTTaGTCTGGTCGACATAACCCA +
Preference number: 4 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRPLPAL*SGRHNP
Trigger: TGGGTTATGTCGACCAGATCAAAGAGCTGGTAGAGG...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGAAGGAGTAGTGCAGGGTaGTGCCCACCGCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRRSSAG*CPPPGR
Trigger: TCTGCCAGGCGGTGGGCATCACCCTGCACTACTCCT...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTTGGTTCCTGCGAAGATaGCGGGGGTGGCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVWFLRR*RGWPRH
Trigger: GTGGCGTGGCCACCCCCGTCATCTTCGCAGGAACCA...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR GCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGATCGGTGGGGCTGTTGTaGAGACTGCCGCTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRSVGLL*RLPLSL
Trigger: CAGCGAGAGCGGCAGTCTGCACAACAGCCCCACCGA...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGACCTGGGATGTGCTGTaGCCTTTCACACAGACGGAG +
Preference number: 4 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLTWDVL*PFTQTE
Trigger: CTCCGTCTGTGTGAAAGGGCACAGCACATCCCAGGT...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGATCCCCGAAGCGGATCTaGCCTGTACCCCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRSPKRI*PVPPVS
Trigger: GGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGA...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCAGTAGTGAAATGCTGGTaGTTGGTTTTAGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSVVKCW*LVLGWG
Trigger: TCCCCAACCTAAAACCAACCACCAGCATTTCACTAC...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTGGACGGAAATGTATTATGCGTGTTTCTGGGATTGTCTGTCGCTACCCCAGAGCCTCTGCTTGTGGAGTaGTTGGCATTCCCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: LDGNVLCVFLGLSVATPEPLLVE*LAFPAV
Trigger: TACTGCTGGGAATGCCAACCACTCCACAAGCAGAGG...CTCTGGGGTAGCGACAGACAATCCCAGAAACACGCATAATACATTTCCGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTGGACGGAAATGTATTATGCGTGTTTCTGGGATTGTCTGTCGCTACCCCAGAGTTGGACCCTGGGTCCTaGAGTAAAGTCAGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: LDGNVLCVFLGLSVATPELDPGS*SKVRSA
Trigger: TGCACTCCTGACTTTACTCCAGGACCCAGGGTCCAA...CTCTGGGGTAGCGACAGACAATCCCAGAAACACGCATAATACATTTCCGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CAA 72 bp AGGAGAGATTCCCATCCCTTGGTGTGGGAGAGCAAGTaGCCTATGTCCATGTTCTGTGAGATGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RRDSHPLVWESK*PMSMFCEMAFL
Trigger: GAGGAAAGCCATCTCACAGAACATGGACATAGGCAACTTGCTCTCCCACACCAAGGGATGGGAATCTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGACAGCTTCTCCAGCAGTaGCAGTCCCAGGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRQLLQQ*QSQEGA
Trigger: GGCTCCTTCCTGGGACTGTCACTGCTGGAGAAGCTG...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTGGATGCGGGTGTCGTTaGCCAGGTAGCTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVGCGCR*PGSWQS
Trigger: GCTCTGCCAGCTACCTGGGCAACGACACCCGCATCC...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp ATGATGGGTTTGTGTGTATGGTGTCATGAGATCCTCTACCTCATAACAAAAGGATGCCCCAGTTCCACCTaGCCTCTCCCTCTACTCCCC +
Preference number: 4 (lower is better)
Translates to: MMGLCVWCHEILYLITKGCPSST*PLPLLP
Trigger: GGGGAGTAGAGGGAGAGGGCAGGTGGAACTGGGGCA...TCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGAACAGCCACTGGTTCCTaGGAAGATGACGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRTATGS*EDDGGG
Trigger: GCCACCCCCGTCATCTTCGCAGGAACCAGTGGCTGT...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGACGTTGCCTTGGGCCATaGACACGGTGCACTCCCACT +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRRCLGP*TRCTPT
Trigger: AGTGGGAGTGCACCGTGTCCATGGCCCAAGGCAACG...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGATTGCTGGCGTTGCCTTaGGCCATGGACACGGTGCAC +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRLLALP*AMDTVH
Trigger: GTGCACCGTGTCCATGGCCCAAGGCAACGCCAGCAA...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGACCCCTCCCCCAGGACTaGTTGATGTCTAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRPLPQD*LMSRAA
Trigger: GGCAGCTCTAGACATCAACCAGTCCTGGGGGAGGGG...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGGGAACTGGGGAATTCTaGCCCTACGTGCATTCACAG +
Preference number: 4 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLGTGEF*PYVHSQ
Trigger: CTGTGAATGCACGTAGGGCCAGAATTCCCCAGTTCC...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGATGCTTGTGGAGTGGTTaGCATTCCCAGCAGTATCAA +
Preference number: 4 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRCLWSG*HSQQYQ
Trigger: TTGATACTGCTGGGAATGCCAACCACTCCACAAGCA...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCAGGCTCTTTGCTGCTaGTTTGAATTGGACACACTG +
Preference number: 4 (lower is better)
Translates to: KCQALCCWFELDTLLRLLQALCC*FELDTL
Trigger: CAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTG...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGAGTCGGGAAGCTGGTTTaGCATTTTGTAGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRVGKLV*HFVGFS
Trigger: AGAGAAACCTACAAAATGTCAAACCAGCTTCCCGAC...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTATTGCTTTTCTTGTTTaGAGGAACCAAGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPIAFLV*RNQEGL
Trigger: GAGCCCCTCTTGGTTCCTTCAAACAAGAAAAGCAAT...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp ATGATGGGTTTGTGTGTATGGTGTCATGAGATCCTCTACCTCATAACAAAAGGAGGTGAAGCACATCGGTaGCCTTCTCCAGCACCGCCA +
Preference number: 4 (lower is better)
Translates to: MMGLCVWCHEILYLITKGGEAHR*PSPAPP
Trigger: TGGCGGTGCTGGAGAAGGTCACCGATGTGCTTCACC...TCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGAGTTCCTCGCATTCACTaGGATGTGCTGGGCATGGGG +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRVPRIH*DVLGMG
Trigger: CCCCATGCCCAGCACATCTCAGTGAATGCGAGGAAC...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR GCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTTCAAAGACCCCAGGTTaGAGACTGGAGAAGATGTTT +
Preference number: 4 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPSKTPG*RLEKMF
Trigger: AAACATCTTCTCCAGTCTGCAACCTGGGGTCTTTGA...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTGGCTGTTGTGCAGACTaGCGCTCTCGCTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVGCCAD*RSRWTA
Trigger: TGCTGTCCAGCGAGAGCGGCAGTCTGCACAACAGCC...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGAGAGGGGGCTTCCCTCTaGTTGTGGAGTGGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQREGASL*LWSGWH
Trigger: ATGCCAACCACTCCACAAGCAGAGGGAAGCCCCCTC...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTGCCACCTCTGAACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTAAATGTCAGGCTCTTTaGTGCTGGTTTGAATTGGAC +
Preference number: 4 (lower is better)
Translates to: VPPLNPAVWFKYHSCGNGKCQAL*CWFELD
Trigger: GTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT...ACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTTTGCTGGCGTTGCCTTaGGCCATGGACACGGTGCAC +
Preference number: 4 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVLLALP*AMDTVH
Trigger: GTGCACCGTGTCCATGGCCCAAGGCAACGCCAGCAA...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATAAGACAGCAGAGGTCATaGCTATGTGGAAGCACAAGT +
Preference number: 4 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIRQQRS*LCGSTS
Trigger: ACTTGTGCTTCCACATAGCCATGACCTCTGCTGTCT...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ATGATGGGTTTGTGTGTATGGTGTCATGAGATCCTCTACCTCATAACAAAAGGACCCCTCCCCCAGGACTaGTTGATGTCTAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: MMGLCVWCHEILYLITKGPLPQD*LMSRAA
Trigger: GGCAGCTCTAGACATCAACCAGTCCTGGGGGAGGGG...TCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGATCACCCACAGGCACCTaGCAGTCAGCTGTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRSPTGT*QSAVEV
Trigger: CACCTCAACAGCTGACTGCCAGGTGCCTGTGGGTGA...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTTGGAGATCAAATGATTaGGATGGTTCTTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPWRSND*DGSSSG
Trigger: GCCAGAGGAAGAACCATCCCAATCATTTGATCTCCA...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTTGGAGATCAAATGATTaGGATGGTTCTTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPWRSND*DGSSSG
Trigger: GCCAGAGGAAGAACCATCCCAATCATTTGATCTCCA...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTCCTGTAGTGAAATGCTaGTGGTTGGTTTTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPPVVKC*WLVLGW
Trigger: CCAACCTAAAACCAACCACCAGCATTTCACTACAGG...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CTGGACGGAAATGTATTATGCGTGTTTCTGGGATTGTCTGTCGCTACCCCAGAGCCCTCGGTTTCCATTTaGTCCTGTAGTGAAATGCTG +
Preference number: 4 (lower is better)
Translates to: LDGNVLCVFLGLSVATPEPSVSI*SCSEML
Trigger: CAGCATTTCACTACAGGACCAAATGGAAACCGAGGG...CTCTGGGGTAGCGACAGACAATCCCAGAAACACGCATAATACATTTCCGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGAGTGTTGCTGTGGCTGTaGAAGAGGCGGCCATTTCGG +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRVLLWL*KRRPFR
Trigger: CCGAAATGGCCGCCTCTTCCACAGCCACAGCAACAC...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR TCA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTGAGGCCAGAGTGATGTaGAGACTGGGAGGGAACCCT +
Preference number: 4 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVEARVM*RLGGNP
Trigger: AGGGTTCCCTCCCAGTCTTCACATCACTCTGGCCTC...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCTATGTCCATGTTCTGTaGGATGGCTTTCCTCATAGA +
Preference number: 4 (lower is better)
Translates to: KCQALCCWFELDTLLRLLYVHVL*DGFPHR
Trigger: TCTATGAGGAAAGCCATCTCACAGAACATGGACATA...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ATGATGGGTTTGTGTGTATGGTGTCATGAGATCCTCTACCTCATAACAAAAGGAATGAAGGTGCAGTCGTaGATGAGGCTCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: MMGLCVWCHEILYLITKGMKVQS*MRLSAR
Trigger: CCTGGCCGAGAGCCTCATCCACGACTGCACCTTCAT...TCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ATGATGGGTTTGTGTGTATGGTGTCATGAGATCCTCTACCTCATAACAAAAGGATCACCCACAGGCACCTaGCAGTCAGCTGTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: MMGLCVWCHEILYLITKGSPTGT*QSAVEV
Trigger: CACCTCAACAGCTGACTGCCAGGTGCCTGTGGGTGA...TCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCTCTCTACTGTGGAGCTaGAGATCAAATGATTGGGAT +
Preference number: 4 (lower is better)
Translates to: KCQALCCWFELDTLLRLLSLLWS*RSNDWD
Trigger: ATCCCAATCATTTGATCTCCAGCTCCACAGTAGAGA...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGATGTTATAACCAAGGATaGAAGTGTACACCAGTCCGT +
Preference number: 4 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRCYNQG*KCTPVR
Trigger: ACGGACTGGTGTACACTTCCATCCTTGGTTATAACA...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTCAGCGAAACGGCCACTaGCTCTGTCAGGTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVQRNGH*LCQVSH
Trigger: GTGGGAAACCTGACAGAGCCAGTGGCCGTTTCGCTG...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR TCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGATGTACAGCACCCTGGTaGTGTCGTTGGTGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRCTAPW*CRWCRD
Trigger: GTCTCTACACCAACGACATCACCAGGGTGCTGTACA...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGACTTCTCTTGCCACCCTaGATGTTGAAGTCCCCGAAG +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRLLLPP*MLKSPK
Trigger: CTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAG...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ATGATGGGTTTGTGTGTATGGTGTCATGAGATCCTCTACCTCATAACAAAAGGACTTGGCTTGAGCTCCTaGGAGTCGGGAAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: MMGLCVWCHEILYLITKGLGLSS*ESGSWF
Trigger: AAACCAGCTTCCCGACTCCCAGGAGCTCAAGCCAAG...TCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGCCTGTAGTGAAATGCTaGTGGTTGGTTTTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLPVVKC*WLVLGW
Trigger: CCAACCTAAAACCAACCACCAGCATTTCACTACAGG...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp ATGATGGGTTTGTGTGTATGGTGTCATGAGATCCTCTACCTCATAACAAAAGGAGCTTCCCTCTGCTTGTaGAGTGGTTGGCATTCCCAG +
Preference number: 4 (lower is better)
Translates to: MMGLCVWCHEILYLITKGASLCL*SGWHSQ
Trigger: CTGGGAATGCCAACCACTCCACAAGCAGAGGGAAGC...TCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTGGCTCTGCCATTAGTTaGACCCTGGGTCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVGSAIS*TLGPGV
Trigger: TACTCCAGGACCCAGGGTCCAACTAATGGCAGAGCC...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CAA 72 bp TTCTGGCCCTACGTGCATTCACAGGCAATGATGGGTTaGTGTGTATGGTGTCATGAGATCCTCTACCTCATA +
Preference number: 4 (lower is better)
Translates to: FWPYVHSQAMMG*CVWCHEILYLI
Trigger: TATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCATTGCCTGTGAATGCACGTAGGGCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp ATGATGGGTTTGTGTGTATGGTGTCATGAGATCCTCTACCTCATAACAAAAGGAAAGTTCAGCAGCATGTaGCAGCCTTTCCGGGACACA +
Preference number: 4 (lower is better)
Translates to: MMGLCVWCHEILYLITKGKFSSM*QPFRDT
Trigger: TGTGTCCCGGAAAGGCTGGCACATGCTGCTGAACTT...TCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CAA 72 bp AAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTaGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGA +
Preference number: 4 (lower is better)
Translates to: KCTPVRRYCFSC*KEPRGALPLVG
Trigger: TCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAAAAGCAATACCTACGGACTGGTGTACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTCCTCTACCAGCTCTTTaGTCTGGTCGACATAACCCA +
Preference number: 4 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVPLPAL*SGRHNP
Trigger: TGGGTTATGTCGACCAGATCAAAGAGCTGGTAGAGG...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGATGTCAGGCTCTTTGCTaGTGGTTTGAATTGGACACA +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRCQALC*WFELDT
Trigger: TGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACA...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGATATTATGCGTGTTTCTaGGATTGTCTGTCGCTACCC +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRYYACF*DCLSLP
Trigger: GGGTAGCGACAGACAATCCCAGAAACACGCATAATA...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR TCA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTAAAAGCAGCACCTTGTaGCTTAACATCACCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVKSSTL*LNITCF
Trigger: GAAGCAGGTGATGTTAAGTCACAAGGTGCTGCTTTT...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CCA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGATCTCTACTGTGGAGCTaGAGATCAAATGATTGGGAT +
Preference number: 4 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRSLLWS*RSNDWD
Trigger: ATCCCAATCATTTGATCTCCAGCTCCACAGTAGAGA...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR GCA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTCCAGTCCGTAGGTATTaGTTTTCTTGTTTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVPVRRY*FSCLKE
Trigger: TTCCTTCAAACAAGAAAAGCAATACCTACGGACTGG...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
3UTR CAA 72 bp GATGAGAACATTTCTGATAGTGAAATAGAACAGTATTaGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: DENISDSEIEQY*RTPQEVRDFQR
Trigger: TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACTATCAGAAATGTTCTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 90 bp CGCCCGGCCCTCGGGACACTGGAGGCCCGGCCCCTCCGCGTCGCCTaGTCGCTGGGCGCTGGGCTGGGACCTAGCGGATCGCGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: RPALGTLEARPLRVA*SLGAGLGPSGSRRA
Trigger: AGCCCGGCGCGATCCGCTAGGTCCCAGCCCAGCGCCCAGCGAGCAGGCGACGCGGAGGGGCCGGGCCTCCAGTGTCCCGAGGGCCGGGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 90 bp TCCCAGCTGCGCGGCCGGAGTCTCAGCGCCCGGCCCTCGGGACACTaGAGGCCCGGCCCCTCCGCGTCGCCTGCTCGCTGGGCGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SQLRGRSLSARPSGH*RPGPSASPARWALG
Trigger: GCCCAGCGCCCAGCGAGCAGGCGACGCGGAGGGGCCGGGCCTCCAGTGTCCCGAGGGCCGGGCGCTGAGACTCCGGCCGCGCAGCTGGGA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 90 bp GCCGCCGCCCTTGAGACTGTCGCGGCTGGCGCTGCGGCGCTGGCCTaGCCGGCCCGCCTCAGAAAGCGGCGCGGCGCTGGTGTCGCTGCC +
Preference number: 5 (lower is better)
Translates to: AAALETVAAGAAALA*PARLRKRRGAGVAA
Trigger: GGCAGCGACACCAGCGCCGCGCCGCTTTCTGAGGCGGGCCGGGCAGGCCAGCGCCGCAGCGCCAGCCGCGACAGTCTCAAGGGCGGCGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 90 bp AGCGCGCCGCCGCCCTTGAGACTGTCGCGGCTGGCGCTGCGGCGCTaGCCTGCCCGGCCCGCCTCAGAAAGCGGCGCGGCGCTGGTGTCG +
Preference number: 5 (lower is better)
Translates to: SAPPPLRLSRLALRR*PARPASESGAALVS
Trigger: CGACACCAGCGCCGCGCCGCTTTCTGAGGCGGGCCGGGCAGGCCAGCGCCGCAGCGCCAGCCGCGACAGTCTCAAGGGCGGCGGCGCGCT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 90 bp CCCTCGGGACACTGGAGGCCCGGCCCCTCCGCGTCGCCTGCTCGCTaGGCGCTGGGCTGGGACCTAGCGGATCGCGCCGGGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: PSGHWRPGPSASPAR*ALGWDLADRAGLLL
Trigger: CAGCAGGAGCCCGGCGCGATCCGCTAGGTCCCAGCCCAGCGCCCAGCGAGCAGGCGACGCGGAGGGGCCGGGCCTCCAGTGTCCCGAGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 90 bp CCACCCTCCGCCGAGCCGGGCCAGGGACGCCGCCGCTCAGCCCCTTaGGCCGCTCCCCCGAGCACTTGCAGCTGCGGATGGATAGCGGGC +
Preference number: 5 (lower is better)
Translates to: PPSAEPGQGRRRSAP*AAPPSTCSCGWIAG
Trigger: GCCCGCTATCCATCCGCAGCTGCAAGTGCTCGGGGGAGCGGCCCAAGGGGCTGAGCGGCGGCGTCCCTGGCCCGGCTCGGCGGAGGGTGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 90 bp TTGCCGCAGGCCTCCCCCGCGCGGTGTCCCTTGGCCCGGCTCTTGTaGGCCCGACGCCCGTGGTGCACGTTGTTGGGGTGGCGGTGGGCG +
Preference number: 5 (lower is better)
Translates to: LPQASPARCPLARLL*ARRPWCTLLGWRWA
Trigger: CGCCCACCGCCACCCCAACAACGTGCACCACGGGCGTCGGGCGCACAAGAGCCGGGCCAAGGGACACCGCGCGGGGGAGGCCTGCGGCAA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 90 bp GCCCGGCTCTTGTGCGCCCGACGCCCGTGGTGCACGTTGTTGGGGTaGCGGTGGGCGAGGTTTCCCCGGGTGCCCGCCGGCTCCGGCTCT +
Preference number: 5 (lower is better)
Translates to: ARLLCARRPWCTLLG*RWARFPRVPAGSGS
Trigger: AGAGCCGGAGCCGGCGGGCACCCGGGGAAACCTCGCCCACCGCCACCCCAACAACGTGCACCACGGGCGTCGGGCGCACAAGAGCCGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 90 bp CCTTGGCCCGGCTCTTGTGCGCCCGACGCCCGTGGTGCACGTTGTTaGGGTGGCGGTGGGCGAGGTTTCCCCGGGTGCCCGCCGGCTCCG +
Preference number: 5 (lower is better)
Translates to: PWPGSCAPDARGARC*GGGGRGFPGCPPAP
Trigger: CGGAGCCGGCGGGCACCCGGGGAAACCTCGCCCACCGCCACCCCAACAACGTGCACCACGGGCGTCGGGCGCACAAGAGCCGGGCCAAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS TCA 90 bp CCTCAGAAAGCGGCGCGGCGCTGGTGTCGCTGCCCTCGGACGGCGTaGGCATGGGCTCGCCTTCCAGCTGCAGGCCGGCGCCCGGGCTGT +
Preference number: 5 (lower is better)
Translates to: PQKAARRWCRCPRTA*AWARLPAAGRRPGC
Trigger: ACAGCCCGGGCGCCGGCCTGCAGCTGGAAGGCGAGCCCATGCTCACGCCGTCCGAGGGCAGCGACACCAGCGCCGCGCCGCTTTCTGAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 90 bp GCGCGGTGTCCCTTGGCCCGGCTCTTGTGCGCCCGACGCCCGTGGTaGACGTTGTTGGGGTGGCGGTGGGCGAGGTTTCCCCGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: ARCPLARLLCARRPW*TLLGWRWARFPRVP
Trigger: GGGCACCCGGGGAAACCTCGCCCACCGCCACCCCAACAACGTGCACCACGGGCGTCGGGCGCACAAGAGCCGGGCCAAGGGACACCGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 90 bp CTCTTGTGCGCCCGACGCCCGTGGTGCACGTTGTTGGGGTGGCGGTaGGCGAGGTTTCCCCGGGTGCCCGCCGGCTCCGGCTCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: LLCARRPWCTLLGWR*ARFPRVPAGSGSPS
Trigger: GGAAGGAGAGCCGGAGCCGGCGGGCACCCGGGGAAACCTCGCCCACCGCCACCCCAACAACGTGCACCACGGGCGTCGGGCGCACAAGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 90 bp GGGGCGCCGTTTAGGCTGGCGGCGTTGAGCGGGTACGAGCGGCGATaGCTCTCCTTCTCCAGCGCGCCGCCGCCCTTGAGACTGTCGCGG +
Preference number: 5 (lower is better)
Translates to: GAPFRLAALSGYERR*LSFSSAPPPLRLSR
Trigger: CCGCGACAGTCTCAAGGGCGGCGGCGCGCTGGAGAAGGAGAGCCATCGCCGCTCGTACCCGCTCAACGCCGCCAGCCTAAACGGCGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCCTGTCGGTGGGGCTGTaGTGCAGACTGCCGCTCTCG +
Preference number: 5 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVLSVGL*CRLPLS
Trigger: CGAGAGCGGCAGTCTGCACAACAGCCCCACCGACAG...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 90 bp GCTCGCCTTCCAGCTGCAGGCCGGCGCCCGGGCTGTTGCGGCTGCTaGCCAGGTAGCTGTCGGTGGGGCTGTTGTGCAGACTGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: ARLPAAGRRPGCCGC*PGSCRWGCCADCRS
Trigger: AGAGCGGCAGTCTGCACAACAGCCCCACCGACAGCTACCTGGGCAGCAGCCGCAACAGCCCGGGCGCCGGCCTGCAGCTGGAAGGCGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 90 bp GGCCGGCGCCCGGGCTGTTGCGGCTGCTGCCCAGGTAGCTGTCGGTaGGGCTGTTGTGCAGACTGCCGCTCTCGCTGGACAGCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: GRRPGCCGCCPGSCR*GCCADCRSRWTAAP
Trigger: TGGAGCTGCTGTCCAGCGAGAGCGGCAGTCTGCACAACAGCCCCACCGACAGCTACCTGGGCAGCAGCCGCAACAGCCCGGGCGCCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS TCA 90 bp CAGGCGCGCCACGAGGCTCTCACGTCCCTCCGCCTGGCACAGTGGTaGGTGAAGACGAAGAGGCCCAGGGCGGAGGCTGCCACCCCGTAC +
Preference number: 5 (lower is better)
Translates to: QARHEALTSLRLAQW*VKTKRPRAEAATPY
Trigger: GTACGGGGTGGCAGCCTCCGCCCTGGGCCTCTTCGTCTTCACTCACCACTGTGCCAGGCGGAGGGACGTGAGAGCCTCGTGGCGCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 90 bp GCCACATTGCCCAAGTGCTGGCAGTGCAGGGCGCTGACATTGGGCTaGCTGGAGCGGAGCTGGCAGCCCTCCGAGGTCCAGCCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: ATLPKCWQCRALTLG*LERSWQPSEVQPPA
Trigger: GGCTGGGGGCTGGACCTCGGAGGGCTGCCAGCTCCGCTCCAGCCAGCCCAATGTCAGCGCCCTGCACTGCCAGCACTTGGGCAATGTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CAA 90 bp CCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTACCCTTGGCCCGGCTCTaGTGCGCCCGACGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: PFLGGHRQSDCPGLDGNVPLARL*CARRPW
Trigger: CCACGGGCGTCGGGCGCACAAGAGCCGGGCCAAGGG...TACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTCCCCCGCGCAGGGCCTaGAGCCGGTTCTTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCPPRRA*SRFLPQ
Trigger: CTGCGGCAAGAACCGGCTCAAGGCCCTGCGCGGGGG...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCAGCGCGCCGCCGCCCTaGAGACTGTCGCGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVSAPPP*RLSRLA
Trigger: CGCCAGCCGCGACAGTCTCAAGGGCGGCGGCGCGCT...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCGCCTTGAGCCGGTTCTaGCCGCAGGCCTCCCCCGCG +
Preference number: 5 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVALSRF*PQASPA
Trigger: CGCGGGGGAGGCCTGCGGCAAGAACCGGCTCAAGGC...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCTTGCCACCCTGCATGTaGAAGTCCCCGAAGCGGATC +
Preference number: 5 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVLPPCM*KSPKRI
Trigger: GATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAA...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 90 bp GCGCTCAGCTCCATGAGCACGGCCACATTGCCCAAGTGCTGGCAGTaGAGGGCGCTGACATTGGGCTGGCTGGAGCGGAGCTGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: ALSSMSTATLPKCWQ*RALTLGWLERSWQP
Trigger: GGGCTGCCAGCTCCGCTCCAGCCAGCCCAATGTCAGCGCCCTGCACTGCCAGCACTTGGGCAATGTGGCCGTGCTCATGGAGCTGAGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS CCA 90 bp AGCCGATCCCCCTGGAACACCACTTGGCGTAGGGACGGGATGAGGTaGTGTGTGTGCAGCTCCAGGGCCCCCTCGCAGCAGAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: SRSPWNTTWRRDGMR*CVCSSRAPSQQSWA
Trigger: GGCCCAGCTCTGCTGCGAGGGGGCCCTGGAGCTGCACACACACCACCTCATCCCGTCCCTACGCCAAGTGGTGTTCCAGGGGGATCGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 90 bp CACCCTGGTGATGTCGTTGGTGTAGAGACAGTGGGAGTAGTCCCCTaGCTCCCAGCGGCCGGCACGGTCACACCGGCGGGAGGCTCGGGT +
Preference number: 5 (lower is better)
Translates to: HPGDVVGVETVGVVP*LPAAGTVTPAGGSG
Trigger: ACCCGAGCCTCCCGCCGGTGTGACCGTGCCGGCCGCTGGGAGCCAGGGGACTACTCCCACTGTCTCTACACCAACGACATCACCAGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTACCGTGGTGCACGTTGTaGGGGTGGCGGTGGGCGAGG +
Preference number: 5 (lower is better)
Translates to: PFLGGHRQSDCPGLDGNVPWCTL*GWRWAR
Trigger: CCTCGCCCACCGCCACCCCAACAACGTGCACCACGG...TACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGACGCCCGTGGTGCACGTaGTTGGGGTGGCGGTGGGCG +
Preference number: 5 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGRPWCT*LGWRWA
Trigger: CGCCCACCGCCACCCCAACAACGTGCACCACGGGCG...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS TCA 90 bp AGGGCAGCCGATCCCCCTGGAACACCACTTGGCGTAGGGACGGGATaGGGTGGTGTGTGTGCAGCTCCAGGGCCCCCTCGCAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: RAADPPGTPLGVGTG*GGVCAAPGPPRSRA
Trigger: AGCTCTGCTGCGAGGGGGCCCTGGAGCTGCACACACACCACCTCATCCCGTCCCTACGCCAAGTGGTGTTCCAGGGGGATCGGCTGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 90 bp CCTCCACAGGGGCTCGGTTGTGGTACCAGCGGATGCGGGTGTCGTTaGCCAGGTAGCTGGCAGAGCACTGGAAGGGCAGCCGATCCCCCT +
Preference number: 5 (lower is better)
Translates to: PPQGLGCGTSGCGCR*PGSWQSTGRAADPP
Trigger: AGGGGGATCGGCTGCCCTTCCAGTGCTCTGCCAGCTACCTGGGCAACGACACCCGCATCCGCTGGTACCACAACCGAGCCCCTGTGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 90 bp TTGCTGTGGCTGTGGAAGAGGCGGCCATTTCGGAAGACGAGCAGTTaGAGGGTGCAGTCTGGGGGCACCGGGGGAGCCAGGGCAGCCGGA +
Preference number: 5 (lower is better)
Translates to: LLWLWKRRPFRKTSS*RVQSGGTGGARAAG
Trigger: TCCGGCTGCCCTGGCTCCCCCGGTGCCCCCAGACTGCACCCTGCAACTGCTCGTCTTCCGAAATGGCCGCCTCTTCCACAGCCACAGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS GCA 90 bp TCCTGGCTCCACCAAGCGGCCACAGGTTCGGCTCCCTCAGCCCAGTaGCGCAGCGAAACGGCCACTGGCTCTGTCAGGTTTCCCACGCCA +
Preference number: 5 (lower is better)
Translates to: SWLHQAATGSAPSAQ*RSETATGSVRFPTP
Trigger: TGGCGTGGGAAACCTGACAGAGCCAGTGGCCGTTTCGCTGCGGCACTGGGCTGAGGGAGCCGAACCTGTGGCCGCTTGGTGGAGCCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CAA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTCGCTCCCCCGAGCACTaGCAGCTGCGGATGGATAGC +
Preference number: 5 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCRSPEH*QLRMDS
Trigger: GCTATCCATCCGCAGCTGCAAGTGCTCGGGGGAGCG...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GGAATGGTGGCATTGTTCCTAGTTGTGCCCGGTTCCCACTCCCCTCCCCCAGGACGCCCGTGGTGCACGTaGTTGGGGTGGCGGTGGGCG +
Preference number: 5 (lower is better)
Translates to: GMVALFLVVPGSHSPPPGRPWCT*LGWRWA
Trigger: CGCCCACCGCCACCCCAACAACGTGCACCACGGGCG...TCCTGGGGGAGGGGAGTGGGAACCGGGCACAACTAGGAACAATGCCACCATTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCCTGCTTGTGGAGTGGTaGGCATTCCCAGCAGTATCA +
Preference number: 5 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVLLVEW*AFPAVS
Trigger: TGATACTGCTGGGAATGCCAACCACTCCACAAGCAG...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 90 bp CTGGGAAAGGCGCTCAGCTCCATGAGCACGGCCACATTGCCCAAGTaGTGGCAGTGCAGGGCGCTGACATTGGGCTGGCTGGAGCGGAGC +
Preference number: 5 (lower is better)
Translates to: LGKALSSMSTATLPK*WQCRALTLGWLERS
Trigger: GCTCCGCTCCAGCCAGCCCAATGTCAGCGCCCTGCACTGCCAGCACTTGGGCAATGTGGCCGTGCTCATGGAGCTGAGCGCCTTTCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS CCA 90 bp CTGGCAGAGCACTGGAAGGGCAGCCGATCCCCCTGGAACACCACTTaGCGTAGGGACGGGATGAGGTGGTGTGTGTGCAGCTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LAEHWKGSRSPWNTT*RRDGMRWCVCSSRA
Trigger: GGCCCTGGAGCTGCACACACACCACCTCATCCCGTCCCTACGCCAAGTGGTGTTCCAGGGGGATCGGCTGCCCTTCCAGTGCTCTGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 90 bp GGGTCCCCTTCTTGCGGAGGGGGTGCCCTCCAGGTGAGCTCCTTATaGAGCACTCGCGCCTTCACGCCCATCCAGAGCAGCGTGGATAGG +
Preference number: 5 (lower is better)
Translates to: GSPSCGGGALQVSSL*STRAFTPIQSSVDR
Trigger: CCTATCCACGCTGCTCTGGATGGGCGTGAAGGCGCGAGTGCTCCATAAGGAGCTCACCTGGAGGGCACCCCCTCCGCAAGAAGGGGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 90 bp GGAAAGGCGCTCAGCTCCATGAGCACGGCCACATTGCCCAAGTGCTaGCAGTGCAGGGCGCTGACATTGGGCTGGCTGGAGCGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GKALSSMSTATLPKC*QCRALTLGWLERSW
Trigger: CCAGCTCCGCTCCAGCCAGCCCAATGTCAGCGCCCTGCACTGCCAGCACTTGGGCAATGTGGCCGTGCTCATGGAGCTGAGCGCCTTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CAA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGAGGGAGGCCCTGCTGTaGCCCGCCTTGGGGTTCTGT +
Preference number: 5 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGREALL*PALGFC
Trigger: ACAGAACCCCAAGGCGGGCAACAGCAGGGCCTCCCT...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGACTACGGAGACACCTaGGAGGGCCCCGAGGAGCGG +
Preference number: 5 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGDYGDT*EGPEER
Trigger: CCGCTCCTCGGGGCCCTCCAAGGTGTCTCCGTAGTC...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GACACCTTGGAGGGCCCCGAGGAGCGGGGGAACGAGCCGCGTGGCCAGCCCGTCCCTTTCCCCAGCATATaGCAAAAAGCTCTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: DTLEGPEERGNEPRGQPVPFPSI*QKALQC
Trigger: GCACTGGAGAGCTTTTTGCAATATGCTGGGGAAAGG...GACGGGCTGGCCACGCGGCTCGTTCCCCCGCTCCTCGGGGCCCTCCAAGGTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS TCA 90 bp GCTGGCGTTGCCTTGGGCCATGGACACGGTGCACTCCCACTCGCCTaGGGCCCACACGCCGATGTGAGACAGCGTCAGCTCACTGGTGAT +
Preference number: 5 (lower is better)
Translates to: AGVALGHGHGALPLA*GPHADVRQRQLTGD
Trigger: ATCACCAGTGAGCTGACGCTGTCTCACATCGGCGTGTGGGCCTCAGGCGAGTGGGAGTGCACCGTGTCCATGGCCCAAGGCAACGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 90 bp AAGGTGCAGTCGTGGATGAGGCTCTCGGCCAGGAGGATGCCCGCCTaGTCATCACCCTCCACAGGGGCTCGGTTGTGGTACCAGCGGATG +
Preference number: 5 (lower is better)
Translates to: KVQSWMRLSARRMPA*SSPSTGARLWYQRM
Trigger: CATCCGCTGGTACCACAACCGAGCCCCTGTGGAGGGTGATGAGCAGGCGGGCATCCTCCTGGCCGAGAGCCTCATCCACGACTGCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 90 bp CGATCTCCACCTTCTTGCTGGCGTTGCCTTGGGCCATGGACACGGTaGACTCCCACTCGCCTGAGGCCCACACGCCGATGTGAGACAGCG +
Preference number: 5 (lower is better)
Translates to: RSPPSCWRCLGPWTR*TPTRLRPTRRCETA
Trigger: CGCTGTCTCACATCGGCGTGTGGGCCTCAGGCGAGTGGGAGTGCACCGTGTCCATGGCCCAAGGCAACGCCAGCAAGAAGGTGGAGATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 90 bp AGGCAGAGGTCTCCAGCACCACGATCTCCACCTTCTTGCTGGCGTTaGCTTGGGCCATGGACACGGTGCACTCCCACTCGCCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: RQRSPAPRSPPSCWR*LGPWTRCTPTRLRP
Trigger: GGGCCTCAGGCGAGTGGGAGTGCACCGTGTCCATGGCCCAAGGCAACGCCAGCAAGAAGGTGGAGATCGTGGTGCTGGAGACCTCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 90 bp CCAGCACCACGATCTCCACCTTCTTGCTGGCGTTGCCTTGGGCCATaGACACGGTGCACTCCCACTCGCCTGAGGCCCACACGCCGATGT +
Preference number: 5 (lower is better)
Translates to: PAPRSPPSCWRCLGP*TRCTPTRLRPTRRC
Trigger: ACATCGGCGTGTGGGCCTCAGGCGAGTGGGAGTGCACCGTGTCCATGGCCCAAGGCAACGCCAGCAAGAAGGTGGAGATCGTGGTGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 90 bp GAGGTCTCCAGCACCACGATCTCCACCTTCTTGCTGGCGTTGCCTTaGGCCATGGACACGGTGCACTCCCACTCGCCTGAGGCCCACACG +
Preference number: 5 (lower is better)
Translates to: EVSSTTISTFLLALP*AMDTVHSHSPEAHT
Trigger: CGTGTGGGCCTCAGGCGAGTGGGAGTGCACCGTGTCCATGGCCCAAGGCAACGCCAGCAAGAAGGTGGAGATCGTGGTGCTGGAGACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 90 bp CTGCCAGAGCCCCGCAGGCCCACATGGCCAAGTACAGGAAGTGCGTaGTCACCAGCGCCCCTAGCTGGACTCCCGGAGAATAGAGGCTGT +
Preference number: 5 (lower is better)
Translates to: LPEPRRPTWPSTGSA*SPAPLAGLPENRGC
Trigger: ACAGCCTCTATTCTCCGGGAGTCCAGCTAGGGGCGCTGGTGACCACGCACTTCCTGTACTTGGCCATGTGGGCCTGCGGGGCTCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACGCTCCCCCGAGCACTaGCAGCTGCGGATGGATAGC +
Preference number: 5 (lower is better)
Translates to: SLGLPQGKRPASPALLLPRSPEH*QLRMDS
Trigger: GCTATCCATCCGCAGCTGCAAGTGCTCGGGGGAGCG...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTACCCAGGAAGGAGCCATaGCGGAGCCCCGTGATCTTG +
Preference number: 5 (lower is better)
Translates to: PFLGGHRQSDCPGLDGNVPRKEP*RSPVIL
Trigger: CAAGATCACGGGGCTCCGCAATGGCTCCTTCCTGGG...TACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGCCCAGGAAGGAGCCATaGCGGAGCCCCGTGATCTTG +
Preference number: 5 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGPRKEP*RSPVIL
Trigger: CAAGATCACGGGGCTCCGCAATGGCTCCTTCCTGGG...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GGTGACCTTCTCCAGCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGCTGCTGTTGCCCGCCTaGGGGTTCTGTGCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: GDLLQHRQSLVRSAFRDGLLLPA*GFCARG
Trigger: TCCTCTGGCACAGAACCCCAAGGCGGGCAACAGCAG...CCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGCTGGAGAAGGTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGTCGGAAGACGAGCAGTaGCAGGGTGCAGTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPSEDEQ*QGAVWG
Trigger: CCCCCAGACTGCACCCTGCAACTGCTCGTCTTCCGA...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS CCA 90 bp CTCGGTTGTGGTACCAGCGGATGCGGGTGTCGTTGCCCAGGTAGCTaGCAGAGCACTGGAAGGGCAGCCGATCCCCCTGGAACACCACTT +
Preference number: 5 (lower is better)
Translates to: LGCGTSGCGCRCPGS*QSTGRAADPPGTPL
Trigger: AAGTGGTGTTCCAGGGGGATCGGCTGCCCTTCCAGTGCTCTGCCAGCTACCTGGGCAACGACACCCGCATCCGCTGGTACCACAACCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 90 bp GGAGCCAGGGCAGCCGGAAGGGATGAGAATAGACTCGGGGGCAGCTaGATGGAGGCCAGGGCCACGCTGTTCTTGATGTGGAAGGACGAC +
Preference number: 5 (lower is better)
Translates to: GARAAGRDENRLGGS*MEARATLFLMWKDD
Trigger: GTCGTCCTTCCACATCAAGAACAGCGTGGCCCTGGCCTCCATCCAGCTGCCCCCGAGTCTATTCTCATCCCTTCCGGCTGCCCTGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CAA 90 bp GTGCCACCTCTGAACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTCCCTTGGCCCGGCTCTaGTGCGCCCGACGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: VPPLNPAVWFKYHSCGNGPLARL*CARRPW
Trigger: CCACGGGCGTCGGGCGCACAAGAGCCGGGCCAAGGG...ACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTGCTCTCATCTCTGCTTaGCTGGTGAGGCTGATGGCC +
Preference number: 5 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCALISA*LVRLMA
Trigger: GGCCATCAGCCTCACCAGCAAAGCAGAGATGAGAGC...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CTGGGATGTGCTGTGCCCTTTCACACAGACGGAGGCCTTCCCCGTTCCTGGGAGACCTTCTTGCTGGCGTaGCCTTGGGCCATGGACACG +
Preference number: 5 (lower is better)
Translates to: LGCAVPFHTDGGLPRSWETFLLA*PWAMDT
Trigger: CGTGTCCATGGCCCAAGGCAACGCCAGCAAGAAGGT...CTCCCAGGAACGGGGAAGGCCTCCGTCTGTGTGAAAGGGCACAGCACATCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp AGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTATTATGCGTGTTAAGTCCCCGCGGTTGTaGGCAACACGCTCGGCGGGG +
Preference number: 5 (lower is better)
Translates to: RAPTVRLPRAGRKCIMRVKSPRL*ATRSAG
Trigger: CCCCGCCGAGCGTGTTGCCAACAACCGCGGGGACTT...AACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGAAGCGCGCCGCCGCCCTaGAGACTGTCGCGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRSAPPP*RLSRLA
Trigger: CGCCAGCCGCGACAGTCTCAAGGGCGGCGGCGCGCT...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTCTCCCCCAGGACTGGTaGATGTCTAGAGCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCLPQDW*MSRAAF
Trigger: AAAGGCAGCTCTAGACATCAACCAGTCCTGGGGGAG...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCAGGGGCTTCCCTCTGCTaGTGGAGTGGTTGGCATTCC +
Preference number: 5 (lower is better)
Translates to: SLGLPQGKRPASPALLLPGASLC*WSGWHS
Trigger: GGAATGCCAACCACTCCACAAGCAGAGGGAAGCCCC...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CCCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTAGTCCTGCCCTTCTCTaGCCACCCTGCATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: PVPGRAPTVRLPRAGRKCSPALL*PPCMLK
Trigger: CTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACT...ACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCAGGCCTTGCAGGGCGCTGACATaGGGCTGGCTGGAGCGGAGC +
Preference number: 5 (lower is better)
Translates to: LFAAGLNWTHCCGSSCRPCRALT*GWLERS
Trigger: GCTCCGCTCCAGCCAGCCCAATGTCAGCGCCCTGCA...AGGCCTGCAGGAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CAA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAATGAGCACGGCCACATaGCCCAAGTGCTGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGMSTAT*PKCWQC
Trigger: GCACTGCCAGCACTTGGGCAATGTGGCCGTGCTCAT...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CAA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACTTGCTGGCGTTGCCTaGGGCCATGGACACGGTGCA +
Preference number: 5 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVLAGVA*GHGHGA
Trigger: TGCACCGTGTCCATGGCCCAAGGCAACGCCAGCAAG...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp ACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGAACCTTCTTGCTGGCGTaGCCTTGGGCCATGGACACG +
Preference number: 5 (lower is better)
Translates to: TASHWSALPFGMGQQKWRTFLLA*PWAMDT
Trigger: CGTGTCCATGGCCCAAGGCAACGCCAGCAAGAAGGT...TCTCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACACGATCTCCACCTTCTaGCTGGCGTTGCCTTGGGCC +
Preference number: 5 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHTISTF*LALPWA
Trigger: GGCCCAAGGCAACGCCAGCAAGAAGGTGGAGATCGT...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTAAGCGCATTGGAGGCATaGATGGGCATCAGCACGAAG +
Preference number: 5 (lower is better)
Translates to: PFLGGHRQSDCPGLDGNVSALEA*MGISTK
Trigger: CTTCGTGCTGATGCCCATCAATGCCTCCAATGCGCT...TACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GTGCCACCTCTGAACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTATGCGGCTGCAGGCCTaGTCCTCGCGCTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: VPPLNPAVWFKYHSCGNGMRLQA*SSRWAS
Trigger: GCTGGCCCAGCGCGAGGACAAGGCCTGCAGCCGCAT...ACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCAGCTCTCATCTCTGCTTaGCTGGTGAGGCTGATGGCC +
Preference number: 5 (lower is better)
Translates to: SLGLPQGKRPASPALLLPALISA*LVRLMA
Trigger: GGCCATCAGCCTCACCAGCAAAGCAGAGATGAGAGC...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS TCA 90 bp ATGTCTGAAAAGCTAGCGGCCTCGGCTGTGTACACGCGCAGCTGGTaGGCCAGGGTCAGCGCATTGGAGGCATTGATGGGCATCAGCACG +
Preference number: 5 (lower is better)
Translates to: MSEKLAASAVYTRSW*ARVSALEALMGIST
Trigger: CGTGCTGATGCCCATCAATGCCTCCAATGCGCTGACCCTGGCTCACCAGCTGCGCGTGTACACAGCCGAGGCCGCTAGCTTTTCAGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp AGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTATTATGCGTGTTCTTGCTGGCGTTGCCTaGGGCCATGGACACGGTGCA +
Preference number: 5 (lower is better)
Translates to: RAPTVRLPRAGRKCIMRVLAGVA*GHGHGA
Trigger: TGCACCGTGTCCATGGCCCAAGGCAACGCCAGCAAG...AACACGCATAATACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTAGCCAGGGTCAGCGCATaGGAGGCATTGATGGGCATC +
Preference number: 5 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVARVSA*EALMGI
Trigger: GATGCCCATCAATGCCTCCAATGCGCTGACCCTGGC...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTCCGTGGTGCACGTTGTaGGGGTGGCGGTGGGCGAGG +
Preference number: 5 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPPWCTL*GWRWAR
Trigger: CCTCGCCCACCGCCACCCCAACAACGTGCACCACGG...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CTGGACGGAAATGTATTATGCGTGTTTCTGGGATTGTCTGTCGCTACCCCAGAGCCCCCGCGCAGGGCCTaGAGCCGGTTCTTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: LDGNVLCVFLGLSVATPEPPRRA*SRFLPQ
Trigger: CTGCGGCAAGAACCGGCTCAAGGCCCTGCGCGGGGG...CTCTGGGGTAGCGACAGACAATCCCAGAAACACGCATAATACATTTCCGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCACTGTCGGTGGGGCTGTaGTGCAGACTGCCGCTCTCG +
Preference number: 5 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSLSVGL*CRLPLS
Trigger: CGAGAGCGGCAGTCTGCACAACAGCCCCACCGACAG...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGACTCCCCCAGGACTGGTaGATGTCTAGAGCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGLPQDW*MSRAAF
Trigger: AAAGGCAGCTCTAGACATCAACCAGTCCTGGGGGAG...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CCGTTCCTGGGAGGGCACCGACAGTCAGACTGCCCCGGGCTGGACGGAAATGTATCCAGTGCTAAGGCATaGGCAGGGTGTGTAAACAGC +
Preference number: 5 (lower is better)
Translates to: PFLGGHRQSDCPGLDGNVSSAKA*AGCVNS
Trigger: GCTGTTTACACACCCTGCCAATGCCTTAGCACTGGA...TACATTTCCGTCCAGCCCGGGGCAGTCTGACTGTCGGTGCCCTCCCAGGAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGTGATCTTGTTATaGCTCAAGAGCAGGGTAACG +
Preference number: 5 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVPVILL*LKSRVT
Trigger: CGTTACCCTGCTCTTGAGCAATAACAAGATCACGGG...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CTGGACGGAAATGTATTATGCGTGTTTCTGGGATTGTCTGTCGCTACCCCAGAGATGCGGCTGCAGGCCTaGTCCTCGCGCTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LDGNVLCVFLGLSVATPEMRLQA*SSRWAS
Trigger: GCTGGCCCAGCGCGAGGACAAGGCCTGCAGCCGCAT...CTCTGGGGTAGCGACAGACAATCCCAGAAACACGCATAATACATTTCCGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGGCCTTGAGCCGGTTCTaGCCGCAGGCCTCCCCCGCG +
Preference number: 5 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLALSRF*PQASPA
Trigger: CGCGGGGGAGGCCTGCGGCAAGAACCGGCTCAAGGC...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GTGCCACCTCTGAACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTTTTAGGCTGGCGGCGTaGAGCGGGTACGAGCGGCGA +
Preference number: 5 (lower is better)
Translates to: VPPLNPAVWFKYHSCGNGFRLAA*SGYERR
Trigger: TCGCCGCTCGTACCCGCTCAACGCCGCCAGCCTAAA...ACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GGAATGGTGGCATTGTTCCTAGTTGTGCCCGGTTCCCACTCCCCTCCCCCAGGAGTGGGAATGGTGGCATaGTTCCTAGTTGTGCCCGGT +
Preference number: 5 (lower is better)
Translates to: GMVALFLVVPGSHSPPPGVGMVA*FLVVPG
Trigger: ACCGGGCACAACTAGGAACAATGCCACCATTCCCAC...TCCTGGGGGAGGGGAGTGGGAACCGGGCACAACTAGGAACAATGCCACCATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CTGGGATGTGCTGTGCCCTTTCACACAGACGGAGGCCTTCCCCGTTCCTGGGAGGACCTTGGTTTCCTGTaGTTCTTCCCAAGACCCAGG +
Preference number: 5 (lower is better)
Translates to: LGCAVPFHTDGGLPRSWEDLGFL*FFPRPR
Trigger: CCTGGGTCTTGGGAAGAACAACAGGAAACCAAGGTC...CTCCCAGGAACGGGGAAGGCCTCCGTCTGTGTGAAAGGGCACAGCACATCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGACCTTGGTTTCCTGTaGTTCTTCCCAAGACCCAGG +
Preference number: 5 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGDLGFL*FFPRPR
Trigger: CCTGGGTCTTGGGAAGAACAACAGGAAACCAAGGTC...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACTGCTGCTGGTTTGAATaGGACACACTGCTGCGGCTC +
Preference number: 5 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHCCWFE*DTLLRL
Trigger: GAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCA...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CTGGGATGTGCTGTGCCCTTTCACACAGACGGAGGCCTTCCCCGTTCCTGGGAGAGAGATTCCCATCCCTaGGTGTGGGAGAGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: LGCAVPFHTDGGLPRSWERDSHP*VWESKL
Trigger: CAACTTGCTCTCCCACACCAAGGGATGGGAATCTCT...CTCCCAGGAACGGGGAAGGCCTCCGTCTGTGTGAAAGGGCACAGCACATCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACAGGGCCACGCTGTTCTaGATGTGGAAGGACGACAGA +
Preference number: 5 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHRATLF*MWKDDR
Trigger: TCTGTCGTCCTTCCACATCAAGAACAGCGTGGCCCT...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CAA 90 bp CTGGGATGTGCTGTGCCCTTTCACACAGACGGAGGCCTTCCCCGTTCCTGGGAGCAGCCAATCCGGTTGTaGGAGAGATCTAAACGCTTC +
Preference number: 5 (lower is better)
Translates to: LGCAVPFHTDGGLPRSWEQPIRL*ERSKRF
Trigger: GAAGCGTTTAGATCTCTCCAACAACCGGATTGGCTG...CTCCCAGGAACGGGGAAGGCCTCCGTCTGTGTGAAAGGGCACAGCACATCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CTGGGATGTGCTGTGCCCTTTCACACAGACGGAGGCCTTCCCCGTTCCTGGGAGAGACAGCCAATCCGGTaGTTGGAGAGATCTAAACGC +
Preference number: 5 (lower is better)
Translates to: LGCAVPFHTDGGLPRSWERQPIR*LERSKR
Trigger: GCGTTTAGATCTCTCCAACAACCGGATTGGCTGTCT...CTCCCAGGAACGGGGAAGGCCTCCGTCTGTGTGAAAGGGCACAGCACATCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp TTCTTGTTTGAAGGAACCAAGAGGGGCTCTGCCATTAGTTGGACCCTGGGTCCTTCCACAGGGGCTCGGTaGTGGTACCAGCGGATGCGG +
Preference number: 5 (lower is better)
Translates to: FLFEGTKRGSAISWTLGPSTGAR*WYQRMR
Trigger: CCGCATCCGCTGGTACCACAACCGAGCCCCTGTGGA...AGGACCCAGGGTCCAACTAATGGCAGAGCCCCTCTTGGTTCCTTCAAACAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTAAGCGCATTGGAGGCATaGATGGGCATCAGCACGAAG +
Preference number: 5 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVSALEA*MGISTK
Trigger: CTTCGTGCTGATGCCCATCAATGCCTCCAATGCGCT...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp TCCTTAGGTTTACCCCAGGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACTCTTTGCTGCTGGTTaGAATTGGACACACTGCTGC +
Preference number: 5 (lower is better)
Translates to: SLGLPQGKRPASPALLLPLFAAG*NWTHCC
Trigger: GCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG...TGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCCTGGGGTAAACCTAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GCACCGCCAGTCACTGGTCCGCTCTGCCTTTCGGGATGGGACAGCAGAAGTGGAGTGTGGGAGAGCAAGTaGCCTATGTCCATGTTCTGT +
Preference number: 5 (lower is better)
Translates to: APPVTGPLCLSGWDSRSGVWESK*PMSMFC
Trigger: ACAGAACATGGACATAGGCAACTTGCTCTCCCACAC...TCCACTTCTGCTGTCCCATCCCGAAAGGCAGAGCGGACCAGTGACTGGCGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACAGAGATTCCCATCCCTaGGTGTGGGAGAGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHRDSHP*VWESKL
Trigger: CAACTTGCTCTCCCACACCAAGGGATGGGAATCTCT...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GGAATGGTGGCATTGTTCCTAGTTGTGCCCGGTTCCCACTCCCCTCCCCCAGGAACTGTGCTGATGATGTaGTTCCTCAGGTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: GMVALFLVVPGSHSPPPGTVLMM*FLRSSF
Trigger: GAAGCTGGACCTGAGGAACAACATCATCAGCACAGT...TCCTGGGGGAGGGGAGTGGGAACCGGGCACAACTAGGAACAATGCCACCATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATATCCACAGGGGCTCGGTaGTGGTACCAGCGGATGCGG +
Preference number: 5 (lower is better)
Translates to: SALYPLSPLSLEMRTFLISTGAR*WYQRMR
Trigger: CCGCATCCGCTGGTACCACAACCGAGCCCCTGTGGA...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGAAGTCCCCGCGGTTGTaGGCAACACGCTCGGCGGGG +
Preference number: 5 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLKSPRL*ATRSAG
Trigger: CCCCGCCGAGCGTGTTGCCAACAACCGCGGGGACTT...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATACTGAAGTCCCCGCGGTaGTTGGCAACACGCTCGGCG +
Preference number: 5 (lower is better)
Translates to: SALYPLSPLSLEMRTFLILKSPR*LATRSA
Trigger: CGCCGAGCGTGTTGCCAACAACCGCGGGGACTTCAG...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CTGGACGGAAATGTATTATGCGTGTTTCTGGGATTGTCTGTCGCTACCCCAGAGCTGAAGTCCCCGCGGTaGTTGGCAACACGCTCGGCG +
Preference number: 5 (lower is better)
Translates to: LDGNVLCVFLGLSVATPELKSPR*LATRSA
Trigger: CGCCGAGCGTGTTGCCAACAACCGCGGGGACTTCAG...CTCTGGGGTAGCGACAGACAATCCCAGAAACACGCATAATACATTTCCGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGACCCGCGCGGTGTCCCTaGGCCCGGCTCTTGTGCGCC +
Preference number: 5 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRPARCP*ARLLCA
Trigger: GGCGCACAAGAGCCGGGCCAAGGGACACCGCGCGGG...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGATGCAGGGCCTCAGCTTaGTCCCGGTGTGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRCRASA*SRCATS
Trigger: AGAGGTGGCACACCGGGACAAAGCTGAGGCCCTGCA...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CCCACAGGCACCTGGCAGTCAGCTGTTGAGGTGCAGGGCCTCAGCTTTGTCCCGGTGAAATGCTGGTGGTaGGTTTTAGGTTGGGGAAAA +
Preference number: 5 (lower is better)
Translates to: PTGTWQSAVEVQGLSFVPVKCWW*VLGWGK
Trigger: TTTTCCCCAACCTAAAACCAACCACCAGCATTTCAC...CGGGACAAAGCTGAGGCCCTGCACCTCAACAGCTGACTGCCAGGTGCCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GGGGAAGCGGCCGGCCAGTCCTGCCCTTCTCTTGCCACCCTGCATGTTGAAGTCGTGAAATGCTGGTGGTaGGTTTTAGGTTGGGGAAAA +
Preference number: 5 (lower is better)
Translates to: GEAAGQSCPSLATLHVEVVKCWW*VLGWGK
Trigger: TTTTCCCCAACCTAAAACCAACCACCAGCATTTCAC...GACTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACTGGCCGGCCGCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp ACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACCCCCTGTCTCCACCCTTTCCCCAGCATATaGCAAAAAGCTCTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: TLHVEVPEADLPCTPCLHPFPSI*QKALQC
Trigger: GCACTGGAGAGCTTTTTGCAATATGCTGGGGAAAGG...GTGGAGACAGGGGGTACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS TCA 90 bp TGTTTAGTCGGAGAAGCCTGGGGAGGCCCTGGAAGGTCTCGGAGGTaGGACAGCCAATCCGGTTGTTGGAGAGATCTAAACGCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: CLVGEAWGGPGRSRR*DSQSGCWRDLNASA
Trigger: AGCTGAAGCGTTTAGATCTCTCCAACAACCGGATTGGCTGTCTCACCTCCGAGACCTTCCAGGGCCTCCCCAGGCTTCTCCGACTAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315215.11
ENST00000412232.3
ENST00000428068.5
CDS GCA 90 bp ACAGCAGAGGTCATGGCTATGTGGAAGCACAAGTTCAGCAGCATGTaGCAGCCTTTCCGGGACACACGGATGGAGCTGTGGTTGAGGATG +
Preference number: 5 (lower is better)
Translates to: TAEVMAMWKHKFSSM*QPFRDTRMELWLRM
Trigger: CATCCTCAACCACAGCTCCATCCGTGTGTCCCGGAAAGGCTGGCACATGCTGCTGAACTTGTGCTTCCACATAGCCATGACCTCTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 90 bp CAGCCAGCAGTAGGGGCTGTGGTCCCGGTAGTTGTGGATGTTGACTaGAGCTGTGATGCCACAGATAATGAGTGGAATCCCTCCAGCGAT +
Preference number: 5 (lower is better)
Translates to: QPAVGAVVPVVVDVD*SCDATDNEWNPSSD
Trigger: ATCGCTGGAGGGATTCCACTCATTATCTGTGGCATCACAGCTGCAGTCAACATCCACAACTACCGGGACCACAGCCCCTACTGCTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTGCCAGGGTCAGCGCATaGGAGGCATTGATGGGCATC +
Preference number: 5 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPARVSA*EALMGI
Trigger: GATGCCCATCAATGCCTCCAATGCGCTGACCCTGGC...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CTGGACGGAAATGTATTATGCGTGTTTCTGGGATTGTCTGTCGCTACCCCAGAGCTGCTGTTGCCCGCCTaGGGGTTCTGTGCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: LDGNVLCVFLGLSVATPELLLPA*GFCARG
Trigger: TCCTCTGGCACAGAACCCCAAGGCGGGCAACAGCAG...CTCTGGGGTAGCGACAGACAATCCCAGAAACACGCATAATACATTTCCGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGAGGGAGGCCCTGCTGTaGCCCGCCTTGGGGTTCTGT +
Preference number: 5 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLREALL*PALGFC
Trigger: ACAGAACCCCAAGGCGGGCAACAGCAGGGCCTCCCT...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTCCCGCGCGGTGTCCCTaGGCCCGGCTCTTGTGCGCC +
Preference number: 5 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVPARCP*ARLLCA
Trigger: GGCGCACAAGAGCCGGGCCAAGGGACACCGCGCGGG...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTGACGACAGAGAAACATaGGGCCTCCCGGTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPDDRET*GLPVVQ
Trigger: CTGCACCACCGGGAGGCCCAATGTTTCTCTGTCGTC...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CAA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTTCCACCAGCATCAGGTaGCTGGCCATGTCCACCATC +
Preference number: 5 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPSTSIR*LAMSTI
Trigger: GATGGTGGACATGGCCAGCAACCTGATGCTGGTGGA...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGTGCAGGGCCTCAGCTTaGTCCCGGTGTGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLCRASA*SRCATS
Trigger: AGAGGTGGCACACCGGGACAAAGCTGAGGCCCTGCA...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GCCCTTCTCTTGCCACCCTGCATGTTGAAGTCCCCGAAGCGGATCTGCCCTGTACAGGCAATGATGGGTTaGTGTGTATGGTGTCATGAG +
Preference number: 5 (lower is better)
Translates to: ALLLPPCMLKSPKRICPVQAMMG*CVWCHE
Trigger: CTCATGACACCATACACACAAACCCATCATTGCCTG...TACAGGGCAGATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAAGAGAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GTGCCACCTCTGAACCCTGCTGTCTGGTTTAAGTACCACTCCTGTGGGAATGGTAGTCCTGCCCTTCTCTaGCCACCCTGCATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: VPPLNPAVWFKYHSCGNGSPALL*PPCMLK
Trigger: CTTCAACATGCAGGGTGGCAAGAGAAGGGCAGGACT...ACCATTCCCACAGGAGTGGTACTTAAACCAGACAGCAGGGTTCAGAGGTGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 90 bp AAGATGTTTCCAGATATGTTTAGTCGGAGAAGCCTGGGGAGGCCCTaGAAGGTCTCGGAGGTGAGACAGCCAATCCGGTTGTTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: KMFPDMFSRRSLGRP*KVSEVRQPIRLLER
Trigger: TCTCTCCAACAACCGGATTGGCTGTCTCACCTCCGAGACCTTCCAGGGCCTCCCCAGGCTTCTCCGACTAAACATATCTGGAAACATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315215.11
ENST00000412232.3
ENST00000428068.5
CDS-3UTR CAA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGAGACTACGGAGACACCTaGGAGGGCCCCGAGGAGCGG +
Preference number: 5 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRDYGDT*EGPEER
Trigger: CCGCTCCTCGGGGCCCTCCAAGGTGTCTCCGTAGTC...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCTGCGTGTTTCTGGGATaGTCTGTCGCTACCCCAGAG +
Preference number: 5 (lower is better)
Translates to: KCQALCCWFELDTLLRLLCVFLG*SVATPE
Trigger: CTCTGGGGTAGCGACAGACAATCCCAGAAACACGCA...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATATTGCCACCCTGCATGTaGAAGTCCCCGAAGCGGATC +
Preference number: 5 (lower is better)
Translates to: SALYPLSPLSLEMRTFLILPPCM*KSPKRI
Trigger: GATCCGCTTCGGGGACTTCAACATGCAGGGTGGCAA...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp ATGATGGGTTTGTGTGTATGGTGTCATGAGATCCTCTACCTCATAACAAAAGGAGCCACGCCACGCCTCTaGCCAGGCCCAGCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: MMGLCVWCHEILYLITKGATPRL*PGPAAP
Trigger: TGGAGCTGCTGGGCCTGGCAAGAGGCGTGGCGTGGC...TCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS-3UTR CAA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTTCCAGTGCTAAGGCATaGGCAGGGTGTGTAAACAGC +
Preference number: 5 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPSSAKA*AGCVNS
Trigger: GCTGTTTACACACCCTGCCAATGCCTTAGCACTGGA...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp AAATGTCAGGCTCTTTGCTGCTGGTTTGAATTGGACACACTGCTGCGGCTCCTCCTGCTTGTGGAGTGGTaGGCATTCCCAGCAGTATCA +
Preference number: 5 (lower is better)
Translates to: KCQALCCWFELDTLLRLLLLVEW*AFPAVS
Trigger: TGATACTGCTGGGAATGCCAACCACTCCACAAGCAG...GAGGAGCCGCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAGCCTGACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS TCA 90 bp AAATTTCTGGATCATCTGAGCCACATAGACTACATCCATCATGTCTaGAAAGCTAGCGGCCTCGGCTGTGTACACGCGCAGCTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: KFLDHLSHIDYIHHV*KASGLGCVHAQLVS
Trigger: GCTCACCAGCTGCGCGTGTACACAGCCGAGGCCGCTAGCTTTTCAGACATGATGGATGTAGTCTATGTGGCTCAGATGATCCAGAAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGCGGAGCCCCGTGATCTaGTTATTGCTCAAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLRSPVI*LLLKSR
Trigger: CCTGCTCTTGAGCAATAACAAGATCACGGGGCTCCG...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp AGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGAACTGTGCTGATGATGTaGTTCCTCAGGTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RLGGNPRSDLGFLLFFPRTVLMM*FLRSSF
Trigger: GAAGCTGGACCTGAGGAACAACATCATCAGCACAGT...TCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTGTGTGGGAGAGCAAGTaGCCTATGTCCATGTTCTGT +
Preference number: 5 (lower is better)
Translates to: VSCCSSQDPGFPRFPFGPVWESK*PMSMFC
Trigger: ACAGAACATGGACATAGGCAACTTGCTCTCCCACAC...AGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGAACGATCTCCACCTTCTaGCTGGCGTTGCCTTGGGCC +
Preference number: 5 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRTISTF*LALPWA
Trigger: GGCCCAAGGCAACGCCAGCAAGAAGGTGGAGATCGT...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CTGGACGGAAATGTATTATGCGTGTTTCTGGGATTGTCTGTCGCTACCCCAGAGACCCTAGGTCAGACCTaGGTTTCCTGTTGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LDGNVLCVFLGLSVATPETLGQT*VSCCSS
Trigger: GGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGT...CTCTGGGGTAGCGACAGACAATCCCAGAAACACGCATAATACATTTCCGTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GTATCAACCCTCAGAGGAGCGGGAACTGGGGAATTCTGGCCCTACGTGCATTCAGAAATAGAACAGTATTaGCGTACCCCTCAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: VSTLRGAGTGEFWPYVHSEIEQY*RTPQEV
Trigger: AACTTCCTGAGGGGTACGCAAATACTGTTCTATTTC...TGAATGCACGTAGGGCCAGAATTCCCCAGTTCCCGCTCCTCTGAGGGTTGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 90 bp AAGTCCACAACCTTAAGGGCTGGCAGCTCATCAAAGACCCCAGGTTaGAGACTGGAGAAGATGTTTCCAGATATGTTTAGTCGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: KSTTLRAGSSSKTPG*RLEKMFPDMFSRRS
Trigger: GCTTCTCCGACTAAACATATCTGGAAACATCTTCTCCAGTCTGCAACCTGGGGTCTTTGATGAGCTGCCAGCCCTTAAGGTTGTGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315215.11
ENST00000412232.3
ENST00000428068.5
CDS-3UTR CAA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGAGACAGCCAATCCGGTaGTTGGAGAGATCTAAACGC +
Preference number: 5 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLRQPIR*LERSKR
Trigger: GCGTTTAGATCTCTCCAACAACCGGATTGGCTGTCT...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp AGTGAAATAGAACAGTATTTGCGTACCCCTCAGGAAGTTAGGGACTTTCAGAGATCCACCAGCATCAGGTaGCTGGCCATGTCCACCATC +
Preference number: 5 (lower is better)
Translates to: SEIEQYLRTPQEVRDFQRSTSIR*LAMSTI
Trigger: GATGGTGGACATGGCCAGCAACCTGATGCTGGTGGA...TCTCTGAAAGTCCCTAACTTCCTGAGGGGTACGCAAATACTGTTCTATTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGACCCTAGGTCAGACCTaGGTTTCCTGTTGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLTLGQT*VSCCSS
Trigger: GGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGT...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp TCTGCCCTGTACCCCCTGTCTCCACTGTCACTGGAGATGAGAACATTTCTGATACAGGCAATGATGGGTTaGTGTGTATGGTGTCATGAG +
Preference number: 5 (lower is better)
Translates to: SALYPLSPLSLEMRTFLIQAMMG*CVWCHE
Trigger: CTCATGACACCATACACACAAACCCATCATTGCCTG...TATCAGAAATGTTCTCATCTCCAGTGACAGTGGAGACAGGGGGTACAGGGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp CCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGCTCTTTGCTGCTGGTTaGAATTGGACACACTGCTGC +
Preference number: 5 (lower is better)
Translates to: PSVSIWSCSEMLVVGFRLLFAAG*NWTHCC
Trigger: GCAGCAGTGTGTCCAATTCAAACCAGCAGCAAAGAG...CAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTTGCGTGTTTCTGGGATaGTCTGTCGCTACCCCAGAG +
Preference number: 5 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVCVFLG*SVATPE
Trigger: CTCTGGGGTAGCGACAGACAATCCCAGAAACACGCA...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTGTGGGAATGGTGGCATaGTTCCTAGTTGTGCCCGGT +
Preference number: 5 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVVGMVA*FLVVPG
Trigger: ACCGGGCACAACTAGGAACAATGCCACCATTCCCAC...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp GTTATAACCAAGGATGGAAGTGTACACCAGTCCGTAGGTATTGCTTTTCTTGTTCCCGTGATCTTGTTATaGCTCAAGAGCAGGGTAACG +
Preference number: 5 (lower is better)
Translates to: VITKDGSVHQSVGIAFLVPVILL*LKSRVT
Trigger: CGTTACCCTGCTCTTGAGCAATAACAAGATCACGGG...AACAAGAAAAGCAATACCTACGGACTGGTGTACACTTCCATCCTTGGTTATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS-3UTR CAA 90 bp ATGATGGGTTTGTGTGTATGGTGTCATGAGATCCTCTACCTCATAACAAAAGGACAGCCAATCCGGTTGTaGGAGAGATCTAAACGCTTC +
Preference number: 5 (lower is better)
Translates to: MMGLCVWCHEILYLITKGQPIRL*ERSKRF
Trigger: GAAGCGTTTAGATCTCTCCAACAACCGGATTGGCTG...TCCTTTTGTTATGAGGTAGAGGATCTCATGACACCATACACACAAACCCATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp CACTGGAGGCCCGGCCCCTCCGCGTCGCCTGCTCGCTaGGCGCTGGGCTGGGACCTAGCGGATCGCGCCGGG +
Preference number: 6 (lower is better)
Translates to: HWRPGPSASPAR*ALGWDLADRAG
Trigger: CCCGGCGCGATCCGCTAGGTCCCAGCCCAGCGCCCAGCGAGCAGGCGACGCGGAGGGGCCGGGCCTCCAGTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp CCGCCCTTGAGACTGTCGCGGCTGGCGCTGCGGCGCTaGCCTGCCCGGCCCGCCTCAGAAAGCGGCGCGGCG +
Preference number: 6 (lower is better)
Translates to: PPLRLSRLALRR*PARPASESGAA
Trigger: CGCCGCGCCGCTTTCTGAGGCGGGCCGGGCAGGCCAGCGCCGCAGCGCCAGCCGCGACAGTCTCAAGGGCGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS TCA 72 bp GCGGCGCGGCGCTGGTGTCGCTGCCCTCGGACGGCGTaGGCATGGGCTCGCCTTCCAGCTGCAGGCCGGCGC +
Preference number: 6 (lower is better)
Translates to: AARRWCRCPRTA*AWARLPAAGRR
Trigger: GCGCCGGCCTGCAGCTGGAAGGCGAGCCCATGCTCACGCCGTCCGAGGGCAGCGACACCAGCGCCGCGCCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp GCCGAGCCGGGCCAGGGACGCCGCCGCTCAGCCCCTTaGGCCGCTCCCCCGAGCACTTGCAGCTGCGGATGG +
Preference number: 6 (lower is better)
Translates to: AEPGQGRRRSAP*AAPPSTCSCGW
Trigger: CCATCCGCAGCTGCAAGTGCTCGGGGGAGCGGCCCAAGGGGCTGAGCGGCGGCGTCCCTGGCCCGGCTCGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp GCCCGACGCCCGTGGTGCACGTTGTTGGGGTGGCGGTaGGCGAGGTTTCCCCGGGTGCCCGCCGGCTCCGGC +
Preference number: 6 (lower is better)
Translates to: ARRPWCTLLGWR*ARFPRVPAGSG
Trigger: GCCGGAGCCGGCGGGCACCCGGGGAAACCTCGCCCACCGCCACCCCAACAACGTGCACCACGGGCGTCGGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CAA 72 bp CGCCGAGCCGGGCCAGGGACGCCGCCGCTCAGCCCCTaGGGCCGCTCCCCCGAGCACTTGCAGCTGCGGATG +
Preference number: 6 (lower is better)
Translates to: RRAGPGTPPLSP*GRSPEHLQLRM
Trigger: CATCCGCAGCTGCAAGTGCTCGGGGGAGCGGCCCAAGGGGCTGAGCGGCGGCGTCCCTGGCCCGGCTCGGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CAA 90 bp ACCACCCTCCGCCGAGCCGGGCCAGGGACGCCGCCGCTCAGCCCCTaGGGCCGCTCCCCCGAGCACTTGCAGCTGCGGATGGATAGCGGG +
Preference number: 6 (lower is better)
Translates to: TTLRRAGPGTPPLSP*GRSPEHLQLRMDSG
Trigger: CCCGCTATCCATCCGCAGCTGCAAGTGCTCGGGGGAGCGGCCCAAGGGGCTGAGCGGCGGCGTCCCTGGCCCGGCTCGGCGGAGGGTGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CAA 90 bp CCCTTGGCCCGGCTCTTGTGCGCCCGACGCCCGTGGTGCACGTTGTaGGGGTGGCGGTGGGCGAGGTTTCCCCGGGTGCCCGCCGGCTCC +
Preference number: 6 (lower is better)
Translates to: PLARLLCARRPWCTL*GWRWARFPRVPAGS
Trigger: GGAGCCGGCGGGCACCCGGGGAAACCTCGCCCACCGCCACCCCAACAACGTGCACCACGGGCGTCGGGCGCACAAGAGCCGGGCCAAGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 72 bp CGCCGCTCAGCCCCTTGGGCCGCTCCCCCGAGCACTTaGAGCTGCGGATGGATAGCGGGCAGCCGGGCGCGC +
Preference number: 6 (lower is better)
Translates to: RRSAPWAAPPST*SCGWIAGSRAR
Trigger: GCGCGCCCGGCTGCCCGCTATCCATCCGCAGCTGCAAGTGCTCGGGGGAGCGGCCCAAGGGGCTGAGCGGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 72 bp CCCTCGGACGGCGTGAGCATGGGCTCGCCTTCCAGCTaGAGGCCGGCGCCCGGGCTGTTGCGGCTGCTGCCC +
Preference number: 6 (lower is better)
Translates to: PSDGVSMGSPSS*RPAPGLLRLLP
Trigger: GGGCAGCAGCCGCAACAGCCCGGGCGCCGGCCTGCAGCTGGAAGGCGAGCCCATGCTCACGCCGTCCGAGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 72 bp CTTGAGACTGTCGCGGCTGGCGCTGCGGCGCTGGCCTaGCCGGCCCGCCTCAGAAAGCGGCGCGGCGCTGGT +
Preference number: 6 (lower is better)
Translates to: LETVAAGAAALA*PARLRKRRGAG
Trigger: ACCAGCGCCGCGCCGCTTTCTGAGGCGGGCCGGGCAGGCCAGCGCCGCAGCGCCAGCCGCGACAGTCTCAAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp CCTTGGGCCGCTCCCCCGAGCACTTGCAGCTGCGGATaGATAGCGGGCAGCCGGGCGCGCCCCGAGCCTCGG +
Preference number: 6 (lower is better)
Translates to: PWAAPPSTCSCG*IAGSRARPEPR
Trigger: CCGAGGCTCGGGGCGCGCCCGGCTGCCCGCTATCCATCCGCAGCTGCAAGTGCTCGGGGGAGCGGCCCAAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CAA 72 bp CCGCCGCTCAGCCCCTTGGGCCGCTCCCCCGAGCACTaGCAGCTGCGGATGGATAGCGGGCAGCCGGGCGCG +
Preference number: 6 (lower is better)
Translates to: PPLSPLGRSPEH*QLRMDSGQPGA
Trigger: CGCGCCCGGCTGCCCGCTATCCATCCGCAGCTGCAAGTGCTCGGGGGAGCGGCCCAAGGGGCTGAGCGGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 72 bp GCCTCCCCCGCGCGGTGTCCCTTGGCCCGGCTCTTGTaGGCCCGACGCCCGTGGTGCACGTTGTTGGGGTGG +
Preference number: 6 (lower is better)
Translates to: ASPARCPLARLL*ARRPWCTLLGW
Trigger: CCACCCCAACAACGTGCACCACGGGCGTCGGGCGCACAAGAGCCGGGCCAAGGGACACCGCGCGGGGGAGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp TTGTGCGCCCGACGCCCGTGGTGCACGTTGTTGGGGTaGCGGTGGGCGAGGTTTCCCCGGGTGCCCGCCGGC +
Preference number: 6 (lower is better)
Translates to: LCARRPWCTLLG*RWARFPRVPAG
Trigger: GCCGGCGGGCACCCGGGGAAACCTCGCCCACCGCCACCCCAACAACGTGCACCACGGGCGTCGGGCGCACAA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp GGTTCTTGCCGCAGGCCTCCCCCGCGCGGTGTCCCTTaGCCCGGCTCTTGTGCGCCCGACGCCCGTGGTGCA +
Preference number: 6 (lower is better)
Translates to: GSCRRPPPRGVP*PGSCAPDARGA
Trigger: TGCACCACGGGCGTCGGGCGCACAAGAGCCGGGCCAAGGGACACCGCGCGGGGGAGGCCTGCGGCAAGAACC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CAA 72 bp CAGGCCTCCCCCGCGCGGTGTCCCTTGGCCCGGCTCTaGTGCGCCCGACGCCCGTGGTGCACGTTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: QASPARCPLARL*CARRPWCTLLG
Trigger: CCCCAACAACGTGCACCACGGGCGTCGGGCGCACAAGAGCCGGGCCAAGGGACACCGCGCGGGGGAGGCCTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CAA 90 bp TGTCCCTTGGCCCGGCTCTTGTGCGCCCGACGCCCGTGGTGCACGTaGTTGGGGTGGCGGTGGGCGAGGTTTCCCCGGGTGCCCGCCGGC +
Preference number: 6 (lower is better)
Translates to: CPLARLLCARRPWCT*LGWRWARFPRVPAG
Trigger: GCCGGCGGGCACCCGGGGAAACCTCGCCCACCGCCACCCCAACAACGTGCACCACGGGCGTCGGGCGCACAAGAGCCGGGCCAAGGGACA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CAA 72 bp GCCCGGCTCTTGTGCGCCCGACGCCCGTGGTGCACGTaGTTGGGGTGGCGGTGGGCGAGGTTTCCCCGGGTG +
Preference number: 6 (lower is better)
Translates to: ARLLCARRPWCT*LGWRWARFPRV
Trigger: CACCCGGGGAAACCTCGCCCACCGCCACCCCAACAACGTGCACCACGGGCGTCGGGCGCACAAGAGCCGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CAA 90 bp TTCTTGCCGCAGGCCTCCCCCGCGCGGTGTCCCTTGGCCCGGCTCTaGTGCGCCCGACGCCCGTGGTGCACGTTGTTGGGGTGGCGGTGG +
Preference number: 6 (lower is better)
Translates to: FLPQASPARCPLARL*CARRPWCTLLGWRW
Trigger: CCACCGCCACCCCAACAACGTGCACCACGGGCGTCGGGCGCACAAGAGCCGGGCCAAGGGACACCGCGCGGGGGAGGCCTGCGGCAAGAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 72 bp CCCTTGGCCCGGCTCTTGTGCGCCCGACGCCCGTGGTaGACGTTGTTGGGGTGGCGGTGGGCGAGGTTTCCC +
Preference number: 6 (lower is better)
Translates to: PLARLLCARRPW*TLLGWRWARFP
Trigger: GGGAAACCTCGCCCACCGCCACCCCAACAACGTGCACCACGGGCGTCGGGCGCACAAGAGCCGGGCCAAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp TACAAGCAGCTGCACACCACCCGGGGCAGCCAGCGCTaGGACACTGCCAGAGCCCCGCAGGCCCACATGGCC +
Preference number: 6 (lower is better)
Translates to: YKQLHTTRGSQR*DTARAPQAHMA
Trigger: GGCCATGTGGGCCTGCGGGGCTCTGGCAGTGTCCCAGCGCTGGCTGCCCCGGGTGGTGTGCAGCTGCTTGTA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CAA 72 bp ATGCGCTCCAGGGCACCCACGATGCGGCTGCAGGCCTaGTCCTCGCGCTGGGCCAGCCACAGCAGGTGCTCG +
Preference number: 6 (lower is better)
Translates to: MRSRAPTMRLQA*SSRWASHSRCS
Trigger: CGAGCACCTGCTGTGGCTGGCCCAGCGCGAGGACAAGGCCTGCAGCCGCATCGTGGGTGCCCTGGAGCGCAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CAA 90 bp AGCACGGCCACATTGCCCAAGTGCTGGCAGTGCAGGGCGCTGACATaGGGCTGGCTGGAGCGGAGCTGGCAGCCCTCCGAGGTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: STATLPKCWQCRALT*GWLERSWQPSEVQP
Trigger: GGGCTGGACCTCGGAGGGCTGCCAGCTCCGCTCCAGCCAGCCCAATGTCAGCGCCCTGCACTGCCAGCACTTGGGCAATGTGGCCGTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS GCA 72 bp AGAGGCGGCCATTTCGGAAGACGAGCAGTTGCAGGGTaGAGTCTGGGGGCACCGGGGGAGCCAGGGCAGCCG +
Preference number: 6 (lower is better)
Translates to: RGGHFGRRAVAG*SLGAPGEPGQP
Trigger: CGGCTGCCCTGGCTCCCCCGGTGCCCCCAGACTGCACCCTGCAACTGCTCGTCTTCCGAAATGGCCGCCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS TCA 72 bp CACGAGGCTCTCACGTCCCTCCGCCTGGCACAGTGGTaGGTGAAGACGAAGAGGCCCAGGGCGGAGGCTGCC +
Preference number: 6 (lower is better)
Translates to: HEALTSLRLAQW*VKTKRPRAEAA
Trigger: GGCAGCCTCCGCCCTGGGCCTCTTCGTCTTCACTCACCACTGTGCCAGGCGGAGGGACGTGAGAGCCTCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS TCA 72 bp GGTTTCCCACGCCACAGCCACTGGTTCCTGCGAAGATaGCGGGGGTGGCCACGCCACGCCTCTTGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: GFPRHSHWFLRR*RGWPRHASCQA
Trigger: GGCCTGGCAAGAGGCGTGGCGTGGCCACCCCCGTCATCTTCGCAGGAACCAGTGGCTGTGGCGTGGGAAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS GCA 72 bp ACCACTTGGCGTAGGGACGGGATGAGGTGGTGTGTGTaGAGCTCCAGGGCCCCCTCGCAGCAGAGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: TTWRRDGMRWCV*SSRAPSQQSWA
Trigger: GGCCCAGCTCTGCTGCGAGGGGGCCCTGGAGCTGCACACACACCACCTCATCCCGTCCCTACGCCAAGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp TTTAGGCTGGCGGCGTTGAGCGGGTACGAGCGGCGATaGCTCTCCTTCTCCAGCGCGCCGCCGCCCTTGAGA +
Preference number: 6 (lower is better)
Translates to: FRLAALSGYERR*LSFSSAPPPLR
Trigger: TCTCAAGGGCGGCGGCGCGCTGGAGAAGGAGAGCCATCGCCGCTCGTACCCGCTCAACGCCGCCAGCCTAAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS TCA 72 bp GATCCCCCTGGAACACCACTTGGCGTAGGGACGGGATaGGGTGGTGTGTGTGCAGCTCCAGGGCCCCCTCGC +
Preference number: 6 (lower is better)
Translates to: DPPGTPLGVGTG*GGVCAAPGPPR
Trigger: GCGAGGGGGCCCTGGAGCTGCACACACACCACCTCATCCCGTCCCTACGCCAAGTGGTGTTCCAGGGGGATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS TCA 72 bp GCCTTGGGCCATGGACACGGTGCACTCCCACTCGCCTaGGGCCCACACGCCGATGTGAGACAGCGTCAGCTC +
Preference number: 6 (lower is better)
Translates to: ALGHGHGALPLA*GPHADVRQRQL
Trigger: GAGCTGACGCTGTCTCACATCGGCGTGTGGGCCTCAGGCGAGTGGGAGTGCACCGTGTCCATGGCCCAAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 72 bp CAGGCCTTGTCCTCGCGCTGGGCCAGCCACAGCAGGTaGTCGTCCACCAGCATCAGGTTGCTGGCCATGTCC +
Preference number: 6 (lower is better)
Translates to: QALSSRWASHSR*SSTSIRLLAMS
Trigger: GGACATGGCCAGCAACCTGATGCTGGTGGACGAGCACCTGCTGTGGCTGGCCCAGCGCGAGGACAAGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 72 bp AGAGCCCCGCAGGCCCACATGGCCAAGTACAGGAAGTaGGTGGTCACCAGCGCCCCTAGCTGGACTCCCGGA +
Preference number: 6 (lower is better)
Translates to: RAPQAHMAKYRK*VVTSAPSWTPG
Trigger: TCCGGGAGTCCAGCTAGGGGCGCTGGTGACCACGCACTTCCTGTACTTGGCCATGTGGGCCTGCGGGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp GGTACCAGCGGATGCGGGTGTCGTTGCCCAGGTAGCTaGCAGAGCACTGGAAGGGCAGCCGATCCCCCTGGA +
Preference number: 6 (lower is better)
Translates to: GTSGCGCRCPGS*QSTGRAADPPG
Trigger: TCCAGGGGGATCGGCTGCCCTTCCAGTGCTCTGCCAGCTACCTGGGCAACGACACCCGCATCCGCTGGTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp GGCTCCCTCAGCCCAGTGCCGCAGCGAAACGGCCACTaGCTCTGTCAGGTTTCCCACGCCACAGCCACTGGT +
Preference number: 6 (lower is better)
Translates to: GSLSPVPQRNGH*LCQVSHATATG
Trigger: ACCAGTGGCTGTGGCGTGGGAAACCTGACAGAGCCAGTGGCCGTTTCGCTGCGGCACTGGGCTGAGGGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS GCA 72 bp CACCCTCCACAGGGGCTCGGTTGTGGTACCAGCGGATaGGGGTGTCGTTGCCCAGGTAGCTGGCAGAGCACT +
Preference number: 6 (lower is better)
Translates to: HPPQGLGCGTSG*GCRCPGSWQST
Trigger: AGTGCTCTGCCAGCTACCTGGGCAACGACACCCGCATCCGCTGGTACCACAACCGAGCCCCTGTGGAGGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 72 bp TCGTGGATGAGGCTCTCGGCCAGGAGGATGCCCGCCTaGTCATCACCCTCCACAGGGGCTCGGTTGTGGTAC +
Preference number: 6 (lower is better)
Translates to: SWMRLSARRMPA*SSPSTGARLWY
Trigger: GTACCACAACCGAGCCCCTGTGGAGGGTGATGAGCAGGCGGGCATCCTCCTGGCCGAGAGCCTCATCCACGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 72 bp CCTTCTTGCTGGCGTTGCCTTGGGCCATGGACACGGTaGACTCCCACTCGCCTGAGGCCCACACGCCGATGT +
Preference number: 6 (lower is better)
Translates to: PSCWRCLGPWTR*TPTRLRPTRRC
Trigger: ACATCGGCGTGTGGGCCTCAGGCGAGTGGGAGTGCACCGTGTCCATGGCCCAAGGCAACGCCAGCAAGAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 72 bp GGAAGGACGACAGAGAAACATTGGGCCTCCCGGTGGTaGAGCGGAAGCGGAGCTGCTGGTCAGCTGGGGGCT +
Preference number: 6 (lower is better)
Translates to: GRTTEKHWASRW*SGSGAAGQLGA
Trigger: AGCCCCCAGCTGACCAGCAGCTCCGCTTCCGCTGCACCACCGGGAGGCCCAATGTTTCTCTGTCGTCCTTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS GCA 72 bp CACCAAGCGGCCACAGGTTCGGCTCCCTCAGCCCAGTaGCGCAGCGAAACGGCCACTGGCTCTGTCAGGTTT +
Preference number: 6 (lower is better)
Translates to: HQAATGSAPSAQ*RSETATGSVRF
Trigger: AAACCTGACAGAGCCAGTGGCCGTTTCGCTGCGGCACTGGGCTGAGGGAGCCGAACCTGTGGCCGCTTGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS GCA 72 bp TCCATGAGCACGGCCACATTGCCCAAGTGCTGGCAGTaGAGGGCGCTGACATTGGGCTGGCTGGAGCGGAGC +
Preference number: 6 (lower is better)
Translates to: SMSTATLPKCWQ*RALTLGWLERS
Trigger: GCTCCGCTCCAGCCAGCCCAATGTCAGCGCCCTGCACTGCCAGCACTTGGGCAATGTGGCCGTGCTCATGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS GCA 72 bp GCGCTCAGCTCCATGAGCACGGCCACATTGCCCAAGTaGTGGCAGTGCAGGGCGCTGACATTGGGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: ALSSMSTATLPK*WQCRALTLGWL
Trigger: CAGCCAGCCCAATGTCAGCGCCCTGCACTGCCAGCACTTGGGCAATGTGGCCGTGCTCATGGAGCTGAGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS CCA 72 bp TCTTGCGGAGGGGGTGCCCTCCAGGTGAGCTCCTTATaGAGCACTCGCGCCTTCACGCCCATCCAGAGCAGC +
Preference number: 6 (lower is better)
Translates to: SCGGGALQVSSL*STRAFTPIQSS
Trigger: GCTGCTCTGGATGGGCGTGAAGGCGCGAGTGCTCCATAAGGAGCTCACCTGGAGGGCACCCCCTCCGCAAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp CCCCGCAGGCCCACATGGCCAAGTACAGGAAGTGCGTaGTCACCAGCGCCCCTAGCTGGACTCCCGGAGAAT +
Preference number: 6 (lower is better)
Translates to: PRRPTWPSTGSA*SPAPLAGLPEN
Trigger: ATTCTCCGGGAGTCCAGCTAGGGGCGCTGGTGACCACGCACTTCCTGTACTTGGCCATGTGGGCCTGCGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CAA 90 bp GAGGCAGAGGTCTCCAGCACCACGATCTCCACCTTCTTGCTGGCGTaGCCTTGGGCCATGGACACGGTGCACTCCCACTCGCCTGAGGCC +
Preference number: 6 (lower is better)
Translates to: EAEVSSTTISTFLLA*PWAMDTVHSHSPEA
Trigger: GGCCTCAGGCGAGTGGGAGTGCACCGTGTCCATGGCCCAAGGCAACGCCAGCAAGAAGGTGGAGATCGTGGTGCTGGAGACCTCTGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS TCA 72 bp AAGCTAGCGGCCTCGGCTGTGTACACGCGCAGCTGGTaGGCCAGGGTCAGCGCATTGGAGGCATTGATGGGC +
Preference number: 6 (lower is better)
Translates to: KLAASAVYTRSW*ARVSALEALMG
Trigger: GCCCATCAATGCCTCCAATGCGCTGACCCTGGCTCACCAGCTGCGCGTGTACACAGCCGAGGCCGCTAGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 72 bp TCTTGCCAGGCCCAGCAGCTCCAGGGCGGGAGGTGTTaGTGTGGCTGTGGAAGAGGCGGCCATTTCGGAAGA +
Preference number: 6 (lower is better)
Translates to: SCQAQQLQGGRC*CGCGRGGHFGR
Trigger: TCTTCCGAAATGGCCGCCTCTTCCACAGCCACAGCAACACCTCCCGCCCTGGAGCTGCTGGGCCTGGCAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS CCA 72 bp CACTGGAAGGGCAGCCGATCCCCCTGGAACACCACTTaGCGTAGGGACGGGATGAGGTGGTGTGTGTGCAGC +
Preference number: 6 (lower is better)
Translates to: HWKGSRSPWNTT*RRDGMRWCVCS
Trigger: GCTGCACACACACCACCTCATCCCGTCCCTACGCCAAGTGGTGTTCCAGGGGGATCGGCTGCCCTTCCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp GACAGCGTCAGCTCACTGGTGATGAAGGTGCAGTCGTaGATGAGGCTCTCGGCCAGGAGGATGCCCGCCTGC +
Preference number: 6 (lower is better)
Translates to: DSVSSLVMKVQS*MRLSARRMPAC
Trigger: GCAGGCGGGCATCCTCCTGGCCGAGAGCCTCATCCACGACTGCACCTTCATCACCAGTGAGCTGACGCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp CGATCTCCACCTTCTTGCTGGCGTTGCCTTGGGCCATaGACACGGTGCACTCCCACTCGCCTGAGGCCCACA +
Preference number: 6 (lower is better)
Translates to: RSPPSCWRCLGP*TRCTPTRLRPT
Trigger: TGTGGGCCTCAGGCGAGTGGGAGTGCACCGTGTCCATGGCCCAAGGCAACGCCAGCAAGAAGGTGGAGATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp TGTGGAAGGACGACAGAGAAACATTGGGCCTCCCGGTaGTGCAGCGGAAGCGGAGCTGCTGGTCAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: CGRTTEKHWASR*CSGSGAAGQLG
Trigger: CCCCAGCTGACCAGCAGCTCCGCTTCCGCTGCACCACCGGGAGGCCCAATGTTTCTCTGTCGTCCTTCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS CCA 72 bp CTCAGCTCCATGAGCACGGCCACATTGCCCAAGTGCTaGCAGTGCAGGGCGCTGACATTGGGCTGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: LSSMSTATLPKC*QCRALTLGWLE
Trigger: CTCCAGCCAGCCCAATGTCAGCGCCCTGCACTGCCAGCACTTGGGCAATGTGGCCGTGCTCATGGAGCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS CAA 90 bp GCCAGGGCCACGCTGTTCTTGATGTGGAAGGACGACAGAGAAACATaGGGCCTCCCGGTGGTGCAGCGGAAGCGGAGCTGCTGGTCAGCT +
Preference number: 6 (lower is better)
Translates to: ARATLFLMWKDDRET*GLPVVQRKRSCWSA
Trigger: AGCTGACCAGCAGCTCCGCTTCCGCTGCACCACCGGGAGGCCCAATGTTTCTCTGTCGTCCTTCCACATCAAGAACAGCGTGGCCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS TCA 72 bp GTGCACTCCCACTCGCCTGAGGCCCACACGCCGATGTaGGACAGCGTCAGCTCACTGGTGATGAAGGTGCAG +
Preference number: 6 (lower is better)
Translates to: VHSHSPEAHTPM*DSVSSLVMKVQ
Trigger: CTGCACCTTCATCACCAGTGAGCTGACGCTGTCTCACATCGGCGTGTGGGCCTCAGGCGAGTGGGAGTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 72 bp TCTCCAGCACCACGATCTCCACCTTCTTGCTGGCGTTaGCTTGGGCCATGGACACGGTGCACTCCCACTCGC +
Preference number: 6 (lower is better)
Translates to: SPAPRSPPSCWR*LGPWTRCTPTR
Trigger: GCGAGTGGGAGTGCACCGTGTCCATGGCCCAAGGCAACGCCAGCAAGAAGGTGGAGATCGTGGTGCTGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp AGCACCACGATCTCCACCTTCTTGCTGGCGTTGCCTTaGGCCATGGACACGGTGCACTCCCACTCGCCTGAG +
Preference number: 6 (lower is better)
Translates to: STTISTFLLALP*AMDTVHSHSPE
Trigger: CTCAGGCGAGTGGGAGTGCACCGTGTCCATGGCCCAAGGCAACGCCAGCAAGAAGGTGGAGATCGTGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp CAGAGGTCTCCAGCACCACGATCTCCACCTTCTTGCTaGCGTTGCCTTGGGCCATGGACACGGTGCACTCCC +
Preference number: 6 (lower is better)
Translates to: QRSPAPRSPPSC*RCLGPWTRCTP
Trigger: GGGAGTGCACCGTGTCCATGGCCCAAGGCAACGCCAGCAAGAAGGTGGAGATCGTGGTGCTGGAGACCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CAA 72 bp GTCTCCAGCACCACGATCTCCACCTTCTTGCTGGCGTaGCCTTGGGCCATGGACACGGTGCACTCCCACTCG +
Preference number: 6 (lower is better)
Translates to: VSSTTISTFLLA*PWAMDTVHSHS
Trigger: CGAGTGGGAGTGCACCGTGTCCATGGCCCAAGGCAACGCCAGCAAGAAGGTGGAGATCGTGGTGCTGGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS GCA 72 bp CCAGCCACAGCAGGTGCTCGTCCACCAGCATCAGGTTaGTGGCCATGTCCACCATCACCTCTACCAGCTCTT +
Preference number: 6 (lower is better)
Translates to: PATAGARPPASG*WPCPPSPLPAL
Trigger: AAGAGCTGGTAGAGGTGATGGTGGACATGGCCAGCAACCTGATGCTGGTGGACGAGCACCTGCTGTGGCTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CAA 72 bp ACGCTGTTCTTGATGTGGAAGGACGACAGAGAAACATaGGGCCTCCCGGTGGTGCAGCGGAAGCGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: TLFLMWKDDRET*GLPVVQRKRSC
Trigger: GCAGCTCCGCTTCCGCTGCACCACCGGGAGGCCCAATGTTTCTCTGTCGTCCTTCCACATCAAGAACAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412232.3
CDS CCA 72 bp CCAGATATGTTTAGTCGGAGAAGCCTGGGGAGGCCCTaGAAGGTCTCGGAGGTGAGACAGCCAATCCGGTTG +
Preference number: 6 (lower is better)
Translates to: PDMFSRRSLGRP*KVSEVRQPIRL
Trigger: CAACCGGATTGGCTGTCTCACCTCCGAGACCTTCCAGGGCCTCCCCAGGCTTCTCCGACTAAACATATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315215.11
ENST00000412232.3
ENST00000428068.5
CDS CAA 72 bp TGGAAGGTCTCGGAGGTGAGACAGCCAATCCGGTTGTaGGAGAGATCTAAACGCTTCAGCTCCCCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: WKVSEVRQPIRL*ERSKRFSSPRP
Trigger: GGGCCTGGGGGAGCTGAAGCGTTTAGATCTCTCCAACAACCGGATTGGCTGTCTCACCTCCGAGACCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315215.11
ENST00000412232.3
ENST00000428068.5
CDS CAA 72 bp CCCTGGAAGGTCTCGGAGGTGAGACAGCCAATCCGGTaGTTGGAGAGATCTAAACGCTTCAGCTCCCCCAGG +
Preference number: 6 (lower is better)
Translates to: PWKVSEVRQPIR*LERSKRFSSPR
Trigger: CCTGGGGGAGCTGAAGCGTTTAGATCTCTCCAACAACCGGATTGGCTGTCTCACCTCCGAGACCTTCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315215.11
ENST00000412232.3
ENST00000428068.5
CDS GCA 72 bp GTCATGGCTATGTGGAAGCACAAGTTCAGCAGCATGTaGCAGCCTTTCCGGGACACACGGATGGAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: VMAMWKHKFSSM*QPFRDTRMELW
Trigger: CCACAGCTCCATCCGTGTGTCCCGGAAAGGCTGGCACATGCTGCTGAACTTGTGCTTCCACATAGCCATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp CAGGAACTCGGTGCCCAAGTCCACAACCTTAAGGGCTaGCAGCTCATCAAAGACCCCAGGTTGCAGACTGGA +
Preference number: 6 (lower is better)
Translates to: QELGAQVHNLKG*QLIKDPRLQTG
Trigger: TCCAGTCTGCAACCTGGGGTCTTTGATGAGCTGCCAGCCCTTAAGGTTGTGGACTTGGGCACCGAGTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315215.11
ENST00000412232.3
ENST00000428068.5
CDS GCA 72 bp GTAGGGGCTGTGGTCCCGGTAGTTGTGGATGTTGACTaGAGCTGTGATGCCACAGATAATGAGTGGAATCCC +
Preference number: 6 (lower is better)
Translates to: VGAVVPVVVDVD*SCDATDNEWNP
Trigger: GGGATTCCACTCATTATCTGTGGCATCACAGCTGCAGTCAACATCCACAACTACCGGGACCACAGCCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS TCA 72 bp GATCATCTGAGCCACATAGACTACATCCATCATGTCTaGAAAGCTAGCGGCCTCGGCTGTGTACACGCGCAG +
Preference number: 6 (lower is better)
Translates to: DHLSHIDYIHHV*KASGLGCVHAQ
Trigger: CTGCGCGTGTACACAGCCGAGGCCGCTAGCTTTTCAGACATGATGGATGTAGTCTATGTGGCTCAGATGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315215.11
ENST00000412232.3
CDS CCA 72 bp GGGCTGGCAGCTCATCAAAGACCCCAGGTTGCAGACTaGAGAAGATGTTTCCAGATATGTTTAGTCGGAGAA +
Preference number: 6 (lower is better)
Translates to: GLAAHQRPQVAD*RRCFQICLVGE
Trigger: TTCTCCGACTAAACATATCTGGAAACATCTTCTCCAGTCTGCAACCTGGGGTCTTTGATGAGCTGCCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315215.11
ENST00000412232.3
ENST00000428068.5
CDS GCA 72 bp ACCTTAAGGGCTGGCAGCTCATCAAAGACCCCAGGTTaGAGACTGGAGAAGATGTTTCCAGATATGTTTAGT +
Preference number: 6 (lower is better)
Translates to: TLRAGSSSKTPG*RLEKMFPDMFS
Trigger: ACTAAACATATCTGGAAACATCTTCTCCAGTCTGCAACCTGGGGTCTTTGATGAGCTGCCAGCCCTTAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315215.11
ENST00000412232.3
ENST00000428068.5