RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGB (Homo sapiens)

Ensembl gene IDs: ENSG00000118492

Ensembl transcript IDs: ENST00000326929.8, ENST00000367490.5, ENST00000397944.8, ENST00000473647.1, ENST00000480328.6, ENST00000493950.6, ENST00000522242.5, ENST00000522396.5, ENST00000523560.1, ENST00000681847.1

Found 460 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGCTGATCTGACAGGAGGCAGAGCTCAGGCACCGCTAACCTCCTaGTGCATGGCCCAGTTCCTAACAGGCCTCGGACCAGGACCAGTC +
Preference number: 1 (lower is better)
Translates to: AADLTGGRAQAPLTS*CMAQFLTGLGPGPV
Trigger: GACTGGTCCTGGTCCGAGGCCTGTTAGGAACTGGGCCATGCAGCAGGAGGTTAGCGGTGCCTGAGCTCTGCCTCCTGTCAGATCAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 90 bp GCTGATCTGACAGGAGGCAGAGCTCAGGCACCGCTAACCTCCTGCTaGATGGCCCAGTTCCTAACAGGCCTCGGACCAGGACCAGTCCAT +
Preference number: 1 (lower is better)
Translates to: ADLTGGRAQAPLTSC*MAQFLTGLGPGPVH
Trigger: ATGGACTGGTCCTGGTCCGAGGCCTGTTAGGAACTGGGCCATGCAGCAGGAGGTTAGCGGTGCCTGAGCTCTGCCTCCTGTCAGATCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 90 bp ATGGAGAGTCTCGAGAGAGGCATGGCAGTGGAGCAGAAGAACCGATaGGACGCAGTTTCCATCGTGAGGCTGCTACATATGTGTCGCCTG +
Preference number: 1 (lower is better)
Translates to: MESLERGMAVEQKNR*DAVSIVRLLHMCRL
Trigger: CAGGCGACACATATGTAGCAGCCTCACGATGGAAACTGCGTCTCATCGGTTCTTCTGCTCCACTGCCATGCCTCTCTCGAGACTCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 90 bp GCATGGCAGTGGAGCAGAAGAACCGATGAGACGCAGTTTCCATCGTaGGGCTGCTACATATGTGTCGCCTGTAAATGCTTCCGCCACAAA +
Preference number: 1 (lower is better)
Translates to: AWQWSRRTDETQFPS*GCYICVACKCFRHK
Trigger: TTTGTGGCGGAAGCATTTACAGGCGACACATATGTAGCAGCCTCACGATGGAAACTGCGTCTCATCGGTTCTTCTGCTCCACTGCCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 90 bp AATGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTaGAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATC +
Preference number: 1 (lower is better)
Translates to: NVFLPCALLALFFPW*RHSSTFATRGFCHI
Trigger: GATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR TCA 90 bp CTGGATCCCTTGCATATGCAGTTCACAATAGGATTCCCGCTCCTATaGGACTCTAATGCTGCTGCTGATCTGACAGGAGGCAGAGCTCAG +
Preference number: 1 (lower is better)
Translates to: LDPLHMQFTIGFPLL*DSNAAADLTGGRAQ
Trigger: CTGAGCTCTGCCTCCTGTCAGATCAGCAGCAGCATTAGAGTCTCATAGGAGCGGGAATCCTATTGTGAACTGCATATGCAAGGGATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 90 bp TCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTaGCACTTCTTCCACACCGCACTCCCTGATCCTGTTTGTGTCATC +
Preference number: 1 (lower is better)
Translates to: SLLVDFATSLKPLVN*HFFHTALPDPVCVI
Trigger: GATGACACAAACAGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR CCA 90 bp CTCCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTaGTCAATTGCCACTTCTTCCACACCGCACTCCCTGATCCTGTTT +
Preference number: 1 (lower is better)
Translates to: LHFRYSWILPHPSSL*SIATSSTPHSLILF
Trigger: AAACAGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR CCA 90 bp GCTCTTCTTTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTaGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCT +
Preference number: 1 (lower is better)
Translates to: ALLSLVKTLLHFRYS*ILPHPSSLWSIATS
Trigger: AGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAAAGAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR TCA 90 bp CAAGACTGCCTGGTTTCAGGGATTTCCAAGAAAACGTTTCAGCTGTaGGAAGTCCAGGCTCTATGGGAGGACTGTCTTTTGTTAAGGCTC +
Preference number: 1 (lower is better)
Translates to: QDCLVSGISKKTFQL*EVQALWEDCLLLRL
Trigger: GAGCCTTAACAAAAGACAGTCCTCCCATAGAGCCTGGACTTCTCACAGCTGAAACGTTTTCTTGGAAATCCCTGAAACCAGGCAGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 90 bp TGGTTCAAAGTTGGGCAGTACAACGTGTTCATCCCCAATGACAAATaGCACCATGCTGCAGATGTGTATGGAGTGTCCTACTGGGGAGTA +
Preference number: 1 (lower is better)
Translates to: WFKVGQYNVFIPNDK*HHAADVYGVSYWGV
Trigger: TACTCCCCAGTAGGACACTCCATACACATCTGCAGCATGGTGTCATTTGTCATTGGGGATGAACACGTTGTACTGCCCAACTTTGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 90 bp AGCTCTCTGGTTCAAAGTTGGGCAGTACAACGTGTTCATCCCCAATaGCAAATGACACCATGCTGCAGATGTGTATGGAGTGTCCTACTG +
Preference number: 1 (lower is better)
Translates to: SSLVQSWAVQRVHPQ*QMTPCCRCVWSVLL
Trigger: CAGTAGGACACTCCATACACATCTGCAGCATGGTGTCATTTGTCATTGGGGATGAACACGTTGTACTGCCCAACTTTGAACCAGAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 90 bp TGCTTGCTAGACTGGGAGCTCAAACCTTTCTCACTCTTCAAGAAGTaGAATGCTGGGATTATAGCTTGGCCTTTTCCAGTGGAGCTCACC +
Preference number: 1 (lower is better)
Translates to: CLLDWELKPFSLFKK*NAGIIAWPFPVELT
Trigger: GGTGAGCTCCACTGGAAAAGGCCAAGCTATAATCCCAGCATTTCACTTCTTGAAGAGTGAGAAAGGTTTGAGCTCCCAGTCTAGCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 90 bp AAGGGATGCCGGATGATAACCGAGTGCTTCCTGGGTGGTGGCATTTaGCCTGTGAGTTGCTTATTCACACTTTGGAACTCAAATGAAGTA +
Preference number: 1 (lower is better)
Translates to: KGCRMITECFLGGGI*PVSCLFTLWNSNEV
Trigger: TACTTCATTTGAGTTCCAAAGTGTGAATAAGCAACTCACAGGTCAAATGCCACCACCCAGGAAGCACTCGGTTATCATCCGGCATCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 90 bp CATTGGGTATGTAGTAATCTCGGATTTCCTTTATGGCAAAGGAATTaGATGGAGAGTCTCGAGAGAGGCATGGCAGTGGAGCAGAAGAAC +
Preference number: 1 (lower is better)
Translates to: HWVCSNLGFPLWQRN*MESLERGMAVEQKN
Trigger: GTTCTTCTGCTCCACTGCCATGCCTCTCTCGAGACTCTCCATGCAATTCCTTTGCCATAAAGGAAATCCGAGATTACTACATACCCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 90 bp GCTAGACTGGGAGCTCAAACCTTTCTCACTCTTCAAGAAGTGAAATaGTGGGATTATAGCTTGGCCTTTTCCAGTGGAGCTCACCATAGT +
Preference number: 1 (lower is better)
Translates to: ARLGAQTFLTLQEVK*WDYSLAFSSGAHHS
Trigger: ACTATGGTGAGCTCCACTGGAAAAGGCCAAGCTATAATCCCAGCATTTCACTTCTTGAAGAGTGAGAAAGGTTTGAGCTCCCAGTCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CCA 90 bp AGACTGGGAGCTCAAACCTTTCTCACTCTTCAAGAAGTGAAATGCTaGGATTATAGCTTGGCCTTTTCCAGTGGAGCTCACCATAGTTTC +
Preference number: 1 (lower is better)
Translates to: RLGAQTFLTLQEVKC*DYSLAFSSGAHHSF
Trigger: GAAACTATGGTGAGCTCCACTGGAAAAGGCCAAGCTATAATCCCAGCATTTCACTTCTTGAAGAGTGAGAAAGGTTTGAGCTCCCAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 90 bp TTGGAAGTTCTTCCTGTGACTTTTCCTGTGTTGCTGTGGTCTGGCTaGCTATCTCTCTTTCCAAGTTTAATCCATCACTCTGATGAGCAT +
Preference number: 1 (lower is better)
Translates to: LEVLPVTFPVLLWSG*LSLFPSLIHHSDEH
Trigger: ATGCTCATCAGAGTGATGGATTAAACTTGGAAAGAGAGATAGTCAGCCAGACCACAGCAACACAGGAAAAGTCACAGGAAGAACTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 90 bp ATGGAAGGGGACAGGGTAGTGAGCTGTTTGCAGATCCTTCAAAGCTaGAGAGAGTTTACCCTTATCTTTGAAATTAGCAATCACATTTCC +
Preference number: 1 (lower is better)
Translates to: MEGDRVVSCLQILQS*REFTLIFEISNHIS
Trigger: GGAAATGTGATTGCTAATTTCAAAGATAAGGGTAAACTCTCTGCAGCTTTGAAGGATCTGCAAACAGCTCACTACCCTGTCCCCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 90 bp TTATTATGTAGGACAAAAATAGTTAGGCTAAATACCAAACTTCTCTaGAGTACATGCTGGAGTGACCTCCCACACACTGCAGTCATGGTG +
Preference number: 1 (lower is better)
Translates to: LLCRTKIVRLNTKLL*STCWSDLPHTAVMV
Trigger: CACCATGACTGCAGTGTGTGGGAGGTCACTCCAGCATGTACTGCAGAGAAGTTTGGTATTTAGCCTAACTATTTTTGTCCTACATAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CCA 90 bp TTATACATATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTaGTCAATGTTTCGAATGCTAAGGACTCTGGTCCTATGCTGTCGA +
Preference number: 1 (lower is better)
Translates to: LYISRTSSFNFNRSS*SMFRMLRTLVLCCR
Trigger: TCGACAGCATAGGACCAGAGTCCTTAGCATTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATATGTATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR CCA 90 bp TTCATTGTGTTCAGTGACCAACCTCAAAATCCAGTAGGGTTTATTTaGGTCTTCTTGTTGAGGGTGAACAGTGGATATCTGAGGCTCAAA +
Preference number: 1 (lower is better)
Translates to: FIVFSDQPQNPVGFI*VFLLRVNSGYLRLK
Trigger: TTTGAGCCTCAGATATCCACTGTTCACCCTCAACAAGAAGACCCAAATAAACCCTACTGGATTTTGAGGTTGGTCACTGAACACAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 90 bp AGGGACTGCACAGAGTACTGCACTTCTGATGAGGGTCTTGAACCATaGAGTGAGAATTTGAATTTTTCTTTTTCTCCATCTTTGCTTCTC +
Preference number: 1 (lower is better)
Translates to: RDCTEYCTSDEGLEP*SENLNFSFSPSLLL
Trigger: GAGAAGCAAAGATGGAGAAAAAGAAAAATTCAAATTCTCACTTCATGGTTCAAGACCCTCATCAGAAGTGCAGTACTCTGTGCAGTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 90 bp GCTTTCTTCTTAACATACACTTCTTGCTCTTTCTTGGATGCAGAGTaGAATGAAAGAATGTGCTTGCTAGACTGGGAGCTCAAACCTTTC +
Preference number: 1 (lower is better)
Translates to: AFFLTYTSCSFLDAE*NERMCLLDWELKPF
Trigger: GAAAGGTTTGAGCTCCCAGTCTAGCAAGCACATTCTTTCATTTCACTCTGCATCCAAGAAAGAGCAAGAAGTGTATGTTAAGAAGAAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 90 bp TCTAACGTAAGTTCCTCTCCACATGGCTTGAATTTTAATTGCTGCTaGTACTTCCTCAGCAGAATACTCTTTATCACTTGTGGGCATACA +
Preference number: 1 (lower is better)
Translates to: SNVSSSPHGLNFNCC*YFLSRILFITCGHT
Trigger: TGTATGCCCACAAGTGATAAAGAGTATTCTGCTGAGGAAGTAGCAGCAGCAATTAAAATTCAAGCCATGTGGAGAGGAACTTACGTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 90 bp CAATCTAACGTAAGTTCCTCTCCACATGGCTTGAATTTTAATTGCTaGTGCTACTTCCTCAGCAGAATACTCTTTATCACTTGTGGGCAT +
Preference number: 1 (lower is better)
Translates to: QSNVSSSPHGLNFNC*CYFLSRILFITCGH
Trigger: ATGCCCACAAGTGATAAAGAGTATTCTGCTGAGGAAGTAGCAGCAGCAATTAAAATTCAAGCCATGTGGAGAGGAACTTACGTTAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 90 bp AAGCAATCTAACGTAAGTTCCTCTCCACATGGCTTGAATTTTAATTaGTGCTGCTACTTCCTCAGCAGAATACTCTTTATCACTTGTGGG +
Preference number: 1 (lower is better)
Translates to: KQSNVSSSPHGLNFN*CCYFLSRILFITCG
Trigger: CCCACAAGTGATAAAGAGTATTCTGCTGAGGAAGTAGCAGCAGCAATTAAAATTCAAGCCATGTGGAGAGGAACTTACGTTAGATTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CCA 90 bp GTTGTTTTGGAAGTTACTGAAGATTTTTGTCCCTCACTAATAGTGTaGGAGTCTGGGCTTCCTAAGTTAATTAACTCCTCGTGTCTTTCA +
Preference number: 1 (lower is better)
Translates to: VVLEVTEDFCPSLIV*ESGLPKLINSSCLS
Trigger: TGAAAGACACGAGGAGTTAATTAACTTAGGAAGCCCAGACTCCCACACTATTAGTGAGGGACAAAAATCTTCAGTAACTTCCAAAACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 90 bp AAAAGACAATATTTCCATGGACTTGGTTTGGGGATGGTTTCAGGATaGAACTGTTCCACCTCAGATCATCAGGCATTAGATTCTTATAAG +
Preference number: 1 (lower is better)
Translates to: KRQYFHGLGLGMVSG*NCSTSDHQALDSYK
Trigger: CTTATAAGAATCTAATGCCTGATGATCTGAGGTGGAACAGTTTCATCCTGAAACCATCCCCAAACCAAGTCCATGGAAATATTGTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 90 bp CTTAAAATAATTGCTCAAAATTCCTCCATTGAAGATCTTCCACACTaGATAGATTTCACTGATAATCCATCTCATCAGCTCGCTGCAGAG +
Preference number: 1 (lower is better)
Translates to: LKIIAQNSSIEDLPH*IDFTDNPSHQLAAE
Trigger: CTCTGCAGCGAGCTGATGAGATGGATTATCAGTGAAATCTATGCAGTGTGGAAGATCTTCAATGGAGGAATTTTGAGCAATTATTTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522396.5
3UTR TCA 90 bp TATTTCTTTAGAAACACTATTATTTGTTGTTGGAAGTTCTTCCTGTaGCTTTTCCTGTGTTGCTGTGGTCTGGCTGACTATCTCTCTTTC +
Preference number: 1 (lower is better)
Translates to: YFFRNTIICCWKFFL*LFLCCCGLADYLSF
Trigger: GAAAGAGAGATAGTCAGCCAGACCACAGCAACACAGGAAAAGTCACAGGAAGAACTTCCAACAACAAATAATAGTGTTTCTAAAGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 90 bp TGGCATTTGACCTGTGAGTTGCTTATTCACACTTTGGAACTCAAATaGAGTAAAAGGTTAGGGAAGAGTTCAATTTTTAACACAGATGAG +
Preference number: 1 (lower is better)
Translates to: WHLTCELLIHTLELK*SKRLGKSSIFNTDE
Trigger: CTCATCTGTGTTAAAAATTGAACTCTTCCCTAACCTTTTACTTCATTTGAGTTCCAAAGTGTGAATAAGCAACTCACAGGTCAAATGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CCA 90 bp TGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTGAAGACACTCCGAGTGCTTCCTGGGTaGTGGCATTTGACCTGTGAG +
Preference number: 2 (lower is better)
Translates to: CFPSVCSARALLSLVKTLRVLPG*WHLTCE
Trigger: CTCACAGGTCAAATGCCACCACCCAGGAAGCACTCG...GAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CAA 90 bp CCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTaGGTCAATTGCCACTTCTTCCACACCGCACTCCCTGATCCTGTT +
Preference number: 2 (lower is better)
Translates to: PPLSLLVDFATSLKP*VNCHFFHTALPDPV
Trigger: AACAGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR GCA 90 bp CCGCTCTTCTTGGTCAATGTTTCGAATGCTAAGGACTCTGGTCCTATGCTGTCGTCCTTCCGTGTGCTCTaGTCGCGCTCTTCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: PLFLVNVSNAKDSGPMLSSFRVL*SRSSFP
Trigger: AGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGA...CGACAGCATAGGACCAGAGTCCTTAGCATTCGAAACATTGACCAAGAAGAGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR GCA 90 bp TCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCTGTTTTCCTTCCGTGTaGTCTGCTCGCGCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: SCTRSCLNVFLPCALLALCFPSV*SARALL
Trigger: AAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAACA...GAGCGCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR TCA 90 bp ACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGCGTGTTCATCCCCAATaGCAAATGACACCATGCTGC +
Preference number: 2 (lower is better)
Translates to: TPHSLILFVSSLCSLNLQRVHPQ*QMTPCC
Trigger: GCAGCATGGTGTCATTTGTCATTGGGGATGAACACG...CTGCAGGTTCAGAGAGCAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CCA 90 bp ACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGAGGAGGTGGTTTTGGTaGTGCTACCAGAGGACAAGA +
Preference number: 2 (lower is better)
Translates to: TPHSLILFVSSLCSLNLQRRWFW*CYQRTR
Trigger: TCTTGTCCTCTGGTAGCACCACCAAAACCACCTCCT...CTGCAGGTTCAGAGAGCAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CCA 90 bp TTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCTGCTGCAGATGTGTATaGAGTGTCCTACTGGGGAGT +
Preference number: 2 (lower is better)
Translates to: FPGEDTPPLSLLVDFATSCCRCV*SVLLGS
Trigger: ACTCCCCAGTAGGACACTCCATACACATCTGCAGCA...GGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CAA 90 bp CTTTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTaGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACA +
Preference number: 2 (lower is better)
Translates to: LSLVKTLLHFRYSWI*PHPSSLWSIATSST
Trigger: TGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR TCA 90 bp ACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGGTACGAGGTCCTGTTTaGATGTTTTCCTTCCGTGTG +
Preference number: 2 (lower is better)
Translates to: TPHSLILFVSSLCSLNLQVRGPV*MFSFRV
Trigger: CACACGGAAGGAAAACATTCAAACAGGACCTCGTAC...CTGCAGGTTCAGAGAGCAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR TCA 90 bp TTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCAAAACGTTTCAGCTGTaGGAAGTCCAGGCTCTATGG +
Preference number: 2 (lower is better)
Translates to: FPGEDTPPLSLLVDFATSKTFQL*EVQALW
Trigger: CCATAGAGCCTGGACTTCTCACAGCTGAAACGTTTT...GGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR TCA 90 bp TCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCGCACTCCCTGATCCTCCTCTCCACATGGCTTaGATTTTAATTGCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: SLKPLVNCHFFHTALPDPPLHMA*ILIAAA
Trigger: AGCAGCAGCAATTAAAATTCAAGCCATGTGGAGAGG...AGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR GCA 90 bp TCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCGCACTCCCTGATCCTTTCCGCCTTTTGCATTaGCTGCTGCTGATTCAATTC +
Preference number: 2 (lower is better)
Translates to: SLKPLVNCHFFHTALPDPFRLLH*LLLIQF
Trigger: GAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAA...AGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR GCA 90 bp TCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCTCTTCAGAACAAGACTaGCTGGTTTCAGGGATTTCC +
Preference number: 2 (lower is better)
Translates to: SCTRSCLNVFLPCALLALSSEQD*LVSGIS
Trigger: GGAAATCCCTGAAACCAGGCAGTCTTGTTCTGAAGA...GAGCGCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CCA 90 bp TGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTGAAGACACTCATGTGCTTGCTAGACTaGGAGCTCAAACCTTTCTCA +
Preference number: 2 (lower is better)
Translates to: CFPSVCSARALLSLVKTLMCLLD*ELKPFS
Trigger: TGAGAAAGGTTTGAGCTCCCAGTCTAGCAAGCACAT...GAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR TCA 90 bp CTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGCCACACCGCACTCCCTaGTCCTGTTTGTGTCATCTC +
Preference number: 2 (lower is better)
Translates to: LLLIQFICLQQRICICFPPHRTP*SCLCHL
Trigger: GAGATGACACAAACAGGATCAGGGAGTGCGGTGTGG...CGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR TCA 90 bp ACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGTGCATTGCCTGCTGCTaGTTCAATTCATCTGTTTGC +
Preference number: 2 (lower is better)
Translates to: TPHSLILFVSSLCSLNLQCIACC*FNSSVC
Trigger: GCAAACAGATGAATTGAATCAGCAGCAGGCAATGCA...CTGCAGGTTCAGAGAGCAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR CAA 90 bp CTGAGAAGCCTTGATTGCTCTTCCTGGCTCAGTTGTCTCCCAGGCTaGTTTCATGGCTCGGATTTCATCTGCCCTTTCTGTATCCTTTTT +
Preference number: 2 (lower is better)
Translates to: LRSLDCSSWLSCLPG*FHGSDFICPFCILF
Trigger: AAAAAGGATACAGAAAGGGCAGATGAAATCCGAGCCATGAAACAAGCCTGGGAGACAACTGAGCCAGGAAGAGCAATCAAGGCTTCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR TCA 90 bp ATTGTGTTCAGTGACCAACCTCAAAATCCAGTAGGGTTTATTTGGGTCTTCTTGATGCTGCTGCTGATCTaGCAGGAGGCAGAGCTCAGG +
Preference number: 2 (lower is better)
Translates to: IVFSDQPQNPVGFIWVFLMLLLI*QEAELR
Trigger: CCTGAGCTCTGCCTCCTGTCAGATCAGCAGCAGCAT...CAAGAAGACCCAAATAAACCCTACTGGATTTTGAGGTTGGTCACTGAACACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR TCA 90 bp TTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCACTGCAGTCATGGTGTaGAGACTAGTCTTGATTTCT +
Preference number: 2 (lower is better)
Translates to: FPGEDTPPLSLLVDFATSTAVMV*RLVLIS
Trigger: AGAAATCAAGACTAGTCTTCACACCATGACTGCAGT...GGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR GCA 90 bp CTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGCTTCTCTGCAGTACATaGTGGAGTGACCTCCCACAC +
Preference number: 2 (lower is better)
Translates to: LLLIQFICLQQRICICFPLLCST*WSDLPH
Trigger: GTGTGGGAGGTCACTCCAGCATGTACTGCAGAGAAG...CGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CCA 90 bp GGTTTTGGTGGTGCTACCAGAGGACAAGACCTACTTCTAGTCACCAGCACAGGATGTTTCCAAAATTGTTaGAGATCGTGTACGAGGTCC +
Preference number: 2 (lower is better)
Translates to: GFGGATRGQDLLLVTSTGCFQNC*RSCTRS
Trigger: GGACCTCGTACACGATCTCCAACAATTTTGGAAACA...TCCTGTGCTGGTGACTAGAAGTAGGTCTTGTCCTCTGGTAGCACCACCAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CCA 90 bp GGTCTTCTTGTTGAGGGTGAACAGTGGATATCTGAGGCTCAAAGCGAGGTGCTTCTTGTAATTCTGCAGTaGTGTGCTGGAACTGTCTTC +
Preference number: 2 (lower is better)
Translates to: GLLVEGEQWISEAQSEVLLVILQ*CAGTVF
Trigger: GAAGACAGTTCCAGCACACCACTGCAGAATTACAAG...AAGCACCTCGCTTTGAGCCTCAGATATCCACTGTTCACCCTCAACAAGAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CAA 90 bp AGTGACCAACCTCAAAATCCAGTAGGGTTTATTTGGGTCTTCTTGTaGAGGGTGAACAGTGGATATCTGAGGCTCAAAGCGAGGTGCTTG +
Preference number: 2 (lower is better)
Translates to: SDQPQNPVGFIWVFL*RVNSGYLRLKARCL
Trigger: CAAGCACCTCGCTTTGAGCCTCAGATATCCACTGTTCACCCTCAACAAGAAGACCCAAATAAACCCTACTGGATTTTGAGGTTGGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR TCA 90 bp CTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGCTCTTCTTTCCCTGGTaGAGACACTCCTCCACTTTC +
Preference number: 2 (lower is better)
Translates to: LLLIQFICLQQRICICFPLFFPW*RHSSTF
Trigger: GAAAGTGGAGGAGTGTCTTCACCAGGGAAAGAAGAG...CGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR TCA 90 bp TGTTCCGTAAATCGGCAGCTCTCTGGTTCAAAGTTGGGCAGTACAACGTGTTCATGCATTGCCTGCTGCTaGTTCAATTCATCTGTTTGC +
Preference number: 2 (lower is better)
Translates to: CSVNRQLSGSKLGSTTCSCIACC*FNSSVC
Trigger: GCAAACAGATGAATTGAATCAGCAGCAGGCAATGCA...TGAACACGTTGTACTGCCCAACTTTGAACCAGAGAGCTGCCGATTTACGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR TCA 90 bp CTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGCTGGGTGGTGGCATTTaGCCTGTGAGTTGCTTATTC +
Preference number: 2 (lower is better)
Translates to: LLLIQFICLQQRICICFPLGGGI*PVSCLF
Trigger: GAATAAGCAACTCACAGGTCAAATGCCACCACCCAG...CGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR TCA 90 bp GGTCTTCTTGTTGAGGGTGAACAGTGGATATCTGAGGCTCAAAGCGAGGTGCTTAAGTCTTTCAGTGCTTaGACAAATGTCAGCTGGCTT +
Preference number: 2 (lower is better)
Translates to: GLLVEGEQWISEAQSEVLKSFSA*TNVSWL
Trigger: AAGCCAGCTGACATTTGTTCAAGCACTGAAAGACTT...AAGCACCTCGCTTTGAGCCTCAGATATCCACTGTTCACCCTCAACAAGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR GCA 90 bp TCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCAATTCATCTGTTTaGAGCAGAGGATCTGTATCT +
Preference number: 2 (lower is better)
Translates to: SCTRSCLNVFLPCALLALFNSSV*SRGSVS
Trigger: AGATACAGATCCTCTGCTGCAAACAGATGAATTGAA...GAGCGCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR GCA 90 bp TGTTCCGTAAATCGGCAGCTCTCTGGTTCAAAGTTGGGCAGTACAACGTGTTCATTCCGCCTTTTGCATTaGCTGCTGCTGATTCAATTC +
Preference number: 2 (lower is better)
Translates to: CSVNRQLSGSKLGSTTCSFRLLH*LLLIQF
Trigger: GAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAA...TGAACACGTTGTACTGCCCAACTTTGAACCAGAGAGCTGCCGATTTACGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR GCA 90 bp CGGGCTTCATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCGACTGCACAGAGTACTaGACTTCTGATGAGGGTCTT +
Preference number: 2 (lower is better)
Translates to: RASSKESCISLYISRTSSDCTEY*TSDEGL
Trigger: AAGACCCTCATCAGAAGTGCAGTACTCTGTGCAGTC...GGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATGAAGCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR GCA 90 bp TTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCTGTCTGGCTATGTGTTaGAGTTTCATCAGTTTCACT +
Preference number: 2 (lower is better)
Translates to: FPGEDTPPLSLLVDFATSCLAMC*SFISFT
Trigger: AGTGAAACTGATGAAACTGCAACACATAGCCAGACA...GGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR GCA 90 bp TCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCGCACTCCCTGATCCTCAGAGTAATTTGATTTaGTGGAGTATAAAGGGGAGA +
Preference number: 2 (lower is better)
Translates to: SLKPLVNCHFFHTALPDPQSNLI*WSIKGR
Trigger: TCTCCCCTTTATACTCCAGCAAATCAAATTACTCTG...AGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR GCA 90 bp ATTGTGTTCAGTGACCAACCTCAAAATCCAGTAGGGTTTATTTGGGTCTTCTTGCCGCTAACCTCCTGCTaGATGGCCCAGTTCCTAACA +
Preference number: 2 (lower is better)
Translates to: IVFSDQPQNPVGFIWVFLPLTSC*MAQFLT
Trigger: TGTTAGGAACTGGGCCATGCAGCAGGAGGTTAGCGG...CAAGAAGACCCAAATAAACCCTACTGGATTTTGAGGTTGGTCACTGAACACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR GCA 90 bp TCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTAACATACACTTCTTaGTCTTTCTTGGATGCAGAG +
Preference number: 2 (lower is better)
Translates to: SCTRSCLNVFLPCALLALLTYTS*SFLDAE
Trigger: CTCTGCATCCAAGAAAGAGCAAGAAGTGTATGTTAA...GAGCGCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CAA 90 bp CACTTCTTCCACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTaGCTCTCTGAACCTGCAGAATTCTTTGAGTTTGGTTCTTTTACG +
Preference number: 2 (lower is better)
Translates to: HFFHTALPDPVCVIS*LSEPAEFFEFGSFT
Trigger: CGTAAAAGAACCAAACTCAAAGAATTCTGCAGGTTCAGAGAGCAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGTGGAAGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR CAA 90 bp TGGTCCTATGCTGTCGAAACTGATGAATTTCTTCCGCCTTTTGCATaGCCTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTG +
Preference number: 2 (lower is better)
Translates to: WSYAVETDEFLPPFA*PAADSIHLFAAEDL
Trigger: CAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTCATCAGTTTCGACAGCATAGGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR TCA 90 bp TTTCATAATCAACAGAGACTGTTCCGTAAATCGGCAGCTCTCTGGTTCAAAGTTCTGGGGAGTATGCGTTaGAGAGTAGCATGTGTCTCC +
Preference number: 2 (lower is better)
Translates to: FHNQQRLFRKSAALWFKVLGSMR*RVACVS
Trigger: GGAGACACATGCTACTCTTCAACGCATACTCCCCAG...AACTTTGAACCAGAGAGCTGCCGATTTACGGAACAGTCTCTGTTGATTATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR GCA 90 bp TGTTCCGTAAATCGGCAGCTCTCTGGTTCAAAGTTGGGCAGTACAACGTGTTCAAATACCAAACTTCTCTaGAGTACATGCTGGAGTGAC +
Preference number: 2 (lower is better)
Translates to: CSVNRQLSGSKLGSTTCSNTKLL*STCWSD
Trigger: GTCACTCCAGCATGTACTGCAGAGAAGTTTGGTATT...TGAACACGTTGTACTGCCCAACTTTGAACCAGAGAGCTGCCGATTTACGGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CCA 90 bp TTTCATAATCAACAGAGACTGTTCCGTAAATCGGCAGCTCTCTGGTTCAAAGTTGTCACCAGCACAGGATaGCTACAGATGTGGGAAAGC +
Preference number: 2 (lower is better)
Translates to: FHNQQRLFRKSAALWFKVVTSTG*LQMWES
Trigger: GCTTTCCCACATCTGTAGCCATCCTGTGCTGGTGAC...AACTTTGAACCAGAGAGCTGCCGATTTACGGAACAGTCTCTGTTGATTATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CCA 90 bp TTTCATAATCAACAGAGACTGTTCCGTAAATCGGCAGCTCTCTGGTTCAAAGTTACCAGTCCATGGCTCTaGAGTTGGGGACTGCAGATT +
Preference number: 2 (lower is better)
Translates to: FHNQQRLFRKSAALWFKVTSPWL*SWGLQI
Trigger: AATCTGCAGTCCCCAACTCCAGAGCCATGGACTGGT...AACTTTGAACCAGAGAGCTGCCGATTTACGGAACAGTCTCTGTTGATTATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CCA 90 bp TATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAACCCAGGCTTGTTTCATaGCTCGGATTTCATCTGCCC +
Preference number: 2 (lower is better)
Translates to: YPGLHPLTSTALLGQCFEPRLVS*LGFHLP
Trigger: GGGCAGATGAAATCCGAGCCATGAAACAAGCCTGGG...TTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR TCA 90 bp ACTGATGAATTTCTTCCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGGTACGAGGTCCTGTTTaGATGTTTTCCTTCCGTGTG +
Preference number: 2 (lower is better)
Translates to: TDEFLPPFALPAADSIHLVRGPV*MFSFRV
Trigger: CACACGGAAGGAAAACATTCAAACAGGACCTCGTAC...CAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTCATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR TCA 90 bp GGTCTTCTTGTTGAGGGTGAACAGTGGATATCTGAGGCTCAAAGCGAGGTGCTTTTTAGCATTTGTTGCTaGGGCTTTGCTTTTTGCATA +
Preference number: 2 (lower is better)
Translates to: GLLVEGEQWISEAQSEVLFSICC*GFAFCI
Trigger: TATGCAAAAAGCAAAGCCTCAGCAACAAATGCTAAA...AAGCACCTCGCTTTGAGCCTCAGATATCCACTGTTCACCCTCAACAAGAAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR TCA 90 bp TGTTCCGTAAATCGGCAGCTCTCTGGTTCAAAGTTGGGCAGTACAACGTGTTCAAACCCTACGGGATCATaGAATCTACGCTTTACTTAT +
Preference number: 2 (lower is better)
Translates to: CSVNRQLSGSKLGSTTCSNPTGS*NLRFTY
Trigger: ATAAGTAAAGCGTAGATTTCATGATCCCGTAGGGTT...TGAACACGTTGTACTGCCCAACTTTGAACCAGAGAGCTGCCGATTTACGGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR GCA 90 bp TATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAATGTTTTCCTTCCGTGTaGTCTGCTCGCGCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: YPGLHPLTSTALLGQCFECFPSV*SARALL
Trigger: AAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAACA...TTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR CCA 90 bp TCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAATGCATCCCTCAAGCCTTTaGTCAATTGCCACTTCTTCC +
Preference number: 2 (lower is better)
Translates to: SRTSSFNFNRSSWSMFRMHPSSL*SIATSS
Trigger: GGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATG...CATTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR CCA 90 bp CTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGCATCCCCATTCTTTTTaGCACCAAGGACTGGTTTCA +
Preference number: 2 (lower is better)
Translates to: LLLIQFICLQQRICICFPHPHSF*HQGLVS
Trigger: TGAAACCAGTCCTTGGTGCCAAAAAGAATGGGGATG...CGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CCA 90 bp ATTGTGTTCAGTGACCAACCTCAAAATCCAGTAGGGTTTATTTGGGTCTTCTTGGCTGGGATTATAGCTTaGCCTTTTCCAGTGGAGCTC +
Preference number: 2 (lower is better)
Translates to: IVFSDQPQNPVGFIWVFLAGIIA*PFPVEL
Trigger: GAGCTCCACTGGAAAAGGCCAAGCTATAATCCCAGC...CAAGAAGACCCAAATAAACCCTACTGGATTTTGAGGTTGGTCACTGAACACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CCA 90 bp GGTCTTCTTGTTGAGGGTGAACAGTGGATATCTGAGGCTCAAAGCGAGGTGCTTAGTAATTTGATTTGCTaGAGTATAAAGGGGAGATGT +
Preference number: 2 (lower is better)
Translates to: GLLVEGEQWISEAQSEVLSNLIC*SIKGRC
Trigger: ACATCTCCCCTTTATACTCCAGCAAATCAAATTACT...AAGCACCTCGCTTTGAGCCTCAGATATCCACTGTTCACCCTCAACAAGAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CAA 90 bp CAAATGCATCATTTCATGTATGTTAATCGTGTCTCCTCTACCAGGTaGTCGTATCGTGAGAGCAGGGATATTCATGGTCCTCCAGTTATT +
Preference number: 2 (lower is better)
Translates to: QMHHFMYVNRVSSTR*SYRESRDIHGPPVI
Trigger: AATAACTGGAGGACCATGAATATCCCTGCTCTCACGATACGACAACCTGGTAGAGGAGACACGATTAACATACATGAAATGATGCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CCA 90 bp TATACATATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTCATCCCTCAAGCCTTTaGTCAATTGCCACTTCTTCC +
Preference number: 2 (lower is better)
Translates to: YTYPGLHPLTSTALLGQCHPSSL*SIATSS
Trigger: GGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATG...ACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATATGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR CCA 90 bp TATACATATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTCACTTTCGCTACTCGTaGATTTTGCCACATCCCTCA +
Preference number: 2 (lower is better)
Translates to: YTYPGLHPLTSTALLGQCHFRYS*ILPHPS
Trigger: TGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTG...ACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATATGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR CCA 90 bp TTTCATAATCAACAGAGACTGTTCCGTAAATCGGCAGCTCTCTGGTTCAAAGTTCAGAACAAGACTGCCTaGTTTCAGGGATTTCCAAGA +
Preference number: 2 (lower is better)
Translates to: FHNQQRLFRKSAALWFKVQNKTA*FQGFPR
Trigger: TCTTGGAAATCCCTGAAACCAGGCAGTCTTGTTCTG...AACTTTGAACCAGAGAGCTGCCGATTTACGGAACAGTCTCTGTTGATTATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CAA 90 bp TTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGAATTCTTTGAGTTaGGTTCTTTTACGCCACGTGCAGCTGTTTCTACTTCTTCTTTTG +
Preference number: 2 (lower is better)
Translates to: FVSSLCSLNLQNSLS*VLLRHVQLFLLLLL
Trigger: CAAAAGAAGAAGTAGAAACAGCTGCACGTGGCGTAAAAGAACCAAACTCAAAGAATTCTGCAGGTTCAGAGAGCAAAGAGATGACACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR TCA 90 bp ATTGTGTTCAGTGACCAACCTCAAAATCCAGTAGGGTTTATTTGGGTCTTCTTGACCTGCAGAATTCTTTaGGTTTGGTTCTTTTACGCC +
Preference number: 2 (lower is better)
Translates to: IVFSDQPQNPVGFIWVFLTCRIL*VWFFYA
Trigger: GGCGTAAAAGAACCAAACTCAAAGAATTCTGCAGGT...CAAGAAGACCCAAATAAACCCTACTGGATTTTGAGGTTGGTCACTGAACACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR TCA 90 bp ATTGTGTTCAGTGACCAACCTCAAAATCCAGTAGGGTTTATTTGGGTCTTCTTGGCATATACGACCATATaGGAGGTCTGTATTGCAGAA +
Preference number: 2 (lower is better)
Translates to: IVFSDQPQNPVGFIWVFLAYTTI*EVCIAE
Trigger: TTCTGCAATACAGACCTCTCATATGGTCGTATATGC...CAAGAAGACCCAAATAAACCCTACTGGATTTTGAGGTTGGTCACTGAACACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR GCA 90 bp CCTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCAATGTCTCTTGCATCTaGTTTCTCCTTTGGAACTTT +
Preference number: 2 (lower is better)
Translates to: PAADSIHLFAAEDLYLFSNVSCI*FLLWNF
Trigger: AAAGTTCCAAAGGAGAAAGCAGATGCAAGAGACATT...GGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CAA 90 bp TCTGGCTTTCATAAGCAATCTAACGTAAGTTCCTCTCCACATGGCTaGAATTTTAATTGCTGCTGCTACTTCCTCAGCAGAATACTCTTT +
Preference number: 2 (lower is better)
Translates to: SGFHKQSNVSSSPHG*NFNCCCYFLSRILF
Trigger: AAAGAGTATTCTGCTGAGGAAGTAGCAGCAGCAATTAAAATTCAAGCCATGTGGAGAGGAACTTACGTTAGATTGCTTATGAAAGCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR TCA 90 bp CTGATAATCCATCTCATCAGCTCGCTGCAGAGTAAATGTTCATTTGCTGAAAATTGCATCCCACTTTTCTaGATTTATGTCAGCTTCACT +
Preference number: 2 (lower is better)
Translates to: LIIHLISSLQSKCSFAENCIPLF*IYVSFT
Trigger: AGTGAAGCTGACATAAATTCAGAAAAGTGGGATGCA...ATTTTCAGCAAATGAACATTTACTCTGCAGCGAGCTGATGAGATGGATTATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522396.5
3UTR-3UTR CCA 90 bp CTTCATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTATTCAACCGCTCTTCTTaGTCAATGTTTCGAATGCTA +
Preference number: 2 (lower is better)
Translates to: LHLRSPAFPYTYPGLHPLFNRSS*SMFRML
Trigger: TAGCATTCGAAACATTGACCAAGAAGAGCGGTTGAA...TAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR GCA 90 bp CATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAACTTTCAATTCATCTGTTTaGAGCAGAGGATCTGTATCT +
Preference number: 2 (lower is better)
Translates to: HLRSPAFPYTYPGLHPLTFNSSV*SRGSVS
Trigger: AGATACAGATCCTCTGCTGCAAACAGATGAATTGAA...AGTTAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR CAA 90 bp AGTGTATCCCTTCTTATTCTTGGTATAAAGATAAGGCACCACTTTTaGGAACACCTTTGGCACTTGCTCCATTGTGTCATTATTAACAAT +
Preference number: 2 (lower is better)
Translates to: SVSLLILGIKIRHHF*EHLWHLLHCVIINN
Trigger: ATTGTTAATAATGACACAATGGAGCAAGTGCCAAAGGTGTTCCAAAAAGTGGTGCCTTATCTTTATACCAAGAATAAGAAGGGATACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 72 bp ACAGGAGGCAGAGCTCAGGCACCGCTAACCTCCTGCTaGATGGCCCAGTTCCTAACAGGCCTCGGACCAGGA +
Preference number: 3 (lower is better)
Translates to: TGGRAQAPLTSC*MAQFLTGLGPG
Trigger: TCCTGGTCCGAGGCCTGTTAGGAACTGGGCCATGCAGCAGGAGGTTAGCGGTGCCTGAGCTCTGCCTCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 72 bp CTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTaGAGACACTCCTCCACTTTCGCTACTCGTGGATTT +
Preference number: 3 (lower is better)
Translates to: LPCALLALFFPW*RHSSTFATRGF
Trigger: AAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR TCA 72 bp CTCGAGAGAGGCATGGCAGTGGAGCAGAAGAACCGATaGGACGCAGTTTCCATCGTGAGGCTGCTACATATG +
Preference number: 3 (lower is better)
Translates to: LERGMAVEQKNR*DAVSIVRLLHM
Trigger: CATATGTAGCAGCCTCACGATGGAAACTGCGTCTCATCGGTTCTTCTGCTCCACTGCCATGCCTCTCTCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CCA 72 bp CGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTaGTCAATTGCCACTTCTTCCACACCGCACTCCCTG +
Preference number: 3 (lower is better)
Translates to: RYSWILPHPSSL*SIATSSTPHSL
Trigger: CAGGGAGTGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR CAA 90 bp TCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCCGCTACTCGTGGATTTaGCCACATCCCTCAAGCCTT +
Preference number: 3 (lower is better)
Translates to: SCTRSCLNVFLPCALLALRYSWI*PHPSSL
Trigger: AAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCG...GAGCGCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR CCA 72 bp GGCAAAGGAATTGCATGGAGAGTCTCGAGAGAGGCATaGCAGTGGAGCAGAAGAACCGATGAGACGCAGTTT +
Preference number: 3 (lower is better)
Translates to: GKGIAWRVSREA*QWSRRTDETQF
Trigger: AAACTGCGTCTCATCGGTTCTTCTGCTCCACTGCCATGCCTCTCTCGAGACTCTCCATGCAATTCCTTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp TGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTGAAGACACTCACTGGGGAGTATGCGTaGAAGAGTAGCATGTGTCTC +
Preference number: 3 (lower is better)
Translates to: CFPSVCSARALLSLVKTLTGEYA*KSSMCL
Trigger: GAGACACATGCTACTCTTCAACGCATACTCCCCAGT...GAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp ACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGTGCTGGGATTATAGCTaGGCCTTTTCCAGTGGAGCT +
Preference number: 3 (lower is better)
Translates to: TPHSLILFVSSLCSLNLQCWDYS*AFSSGA
Trigger: AGCTCCACTGGAAAAGGCCAAGCTATAATCCCAGCA...CTGCAGGTTCAGAGAGCAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 72 bp GTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTaGTCTGCTCGCGCTCTTCTTTCCCTGGTGAAGACA +
Preference number: 3 (lower is better)
Translates to: VYEVLFECFPSV*SARALLSLVKT
Trigger: TGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR CCA 72 bp GAAGGGATGCCGGATGATAACCGAGTGCTTCCTGGGTaGTGGCATTTGACCTGTGAGTTGCTTATTCACACT +
Preference number: 3 (lower is better)
Translates to: EGMPDDNRVLPG*WHLTCELLIHT
Trigger: AGTGTGAATAAGCAACTCACAGGTCAAATGCCACCACCCAGGAAGCACTCGGTTATCATCCGGCATCCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp TGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTGAAGACACTCGTTTGTGTCATCTCTTaGCTCTCTGAACCTGCAGAA +
Preference number: 3 (lower is better)
Translates to: CFPSVCSARALLSLVKTLVCVIS*LSEPAE
Trigger: TTCTGCAGGTTCAGAGAGCAAAGAGATGACACAAAC...GAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR CAA 90 bp GTCTCCTCTACCAGGTTGTCGTATCGTGAGAGCAGGGATATTCATGGTCCTCCATTCTCCTTTGGAACTTaGTCGCTTTTCTCAGGAGCC +
Preference number: 3 (lower is better)
Translates to: VSSTRLSYRESRDIHGPPFSFGT*SLFSGA
Trigger: GGCTCCTGAGAAAAGCGACAAAGTTCCAAAGGAGAA...TGGAGGACCATGAATATCCCTGCTCTCACGATACGACAACCTGGTAGAGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp TGTTCCGTAAATCGGCAGCTCTCTGGTTCAAAGTTGGGCAGTACAACGTGTTCATCCATGGCTCTGGAGTaGGGGACTGCAGATTTAGAG +
Preference number: 3 (lower is better)
Translates to: CSVNRQLSGSKLGSTTCSSMALE*GTADLE
Trigger: CTCTAAATCTGCAGTCCCCAACTCCAGAGCCATGGA...TGAACACGTTGTACTGCCCAACTTTGAACCAGAGAGCTGCCGATTTACGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 72 bp TGGAGCAGAAGAACCGATGAGACGCAGTTTCCATCGTaGGGCTGCTACATATGTGTCGCCTGTAAATGCTTC +
Preference number: 3 (lower is better)
Translates to: WSRRTDETQFPS*GCYICVACKCF
Trigger: GAAGCATTTACAGGCGACACATATGTAGCAGCCTCACGATGGAAACTGCGTCTCATCGGTTCTTCTGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CCA 72 bp TCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTaGATTTTGCCACATCCCTCAAGCCTTTGGTCAATT +
Preference number: 3 (lower is better)
Translates to: SLVKTLLHFRYS*ILPHPSSLWSI
Trigger: AATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR CAA 90 bp GTCTCCTCTACCAGGTTGTCGTATCGTGAGAGCAGGGATATTCATGGTCCTCCAAATTTCTTCCGCCTTTaGCATTGCCTGCTGCTGATT +
Preference number: 3 (lower is better)
Translates to: VSSTRLSYRESRDIHGPPNFFRL*HCLLLI
Trigger: AATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATT...TGGAGGACCATGAATATCCCTGCTCTCACGATACGACAACCTGGTAGAGGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp TTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCGCCCGGAATGCAAATTaGAAGTTTGGAGGAGGTTTT +
Preference number: 3 (lower is better)
Translates to: FPGEDTPPLSLLVDFATSARNAN*KFGGGF
Trigger: AAAACCTCCTCCAAACTTCAAATTTGCATTCCGGGC...GGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 72 bp TTGCATATGCAGTTCACAATAGGATTCCCGCTCCTATaGGACTCTAATGCTGCTGCTGATCTGACAGGAGGC +
Preference number: 3 (lower is better)
Translates to: LHMQFTIGFPLL*DSNAAADLTGG
Trigger: GCCTCCTGTCAGATCAGCAGCAGCATTAGAGTCTCATAGGAGCGGGAATCCTATTGTGAACTGCATATGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp TGGTGCTACCAGAGGACAAGACCTACTTCTAGTCACCAGCACAGGATGGCTACAGAGATGTTTCCAAAATaGTTGGAGATCGTGTACGAG +
Preference number: 3 (lower is better)
Translates to: WCYQRTRPTSSHQHRMATEMFPK*LEIVYE
Trigger: CTCGTACACGATCTCCAACAATTTTGGAAACATCTC...TGTAGCCATCCTGTGCTGGTGACTAGAAGTAGGTCTTGTCCTCTGGTAGCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp TGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTGAAGACACTCATTCAATTCATCTGTTaGCAGCAGAGGATCTGTATC +
Preference number: 3 (lower is better)
Translates to: CFPSVCSARALLSLVKTLIQFIC*QQRICI
Trigger: GATACAGATCCTCTGCTGCAAACAGATGAATTGAAT...GAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR CAA 90 bp GGTTTTGGTGGTGCTACCAGAGGACAAGACCTACTTCTAGTCACCAGCACAGGACTTCTGATGAGGGTCTaGAACCATGAAGTGAGAATT +
Preference number: 3 (lower is better)
Translates to: GFGGATRGQDLLLVTSTGLLMRV*NHEVRI
Trigger: AATTCTCACTTCATGGTTCAAGACCCTCATCAGAAG...TCCTGTGCTGGTGACTAGAAGTAGGTCTTGTCCTCTGGTAGCACCACCAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp CCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCAGAATTCTTTGAGTTaGGTTCTTTTACGCCACGTG +
Preference number: 3 (lower is better)
Translates to: PLSLLVDFATSLKPLVNCQNSLS*VLLRHV
Trigger: CACGTGGCGTAAAAGAACCAAACTCAAAGAATTCTG...GCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR TCA 72 bp CTGGTTTCAGGGATTTCCAAGAAAACGTTTCAGCTGTaGGAAGTCCAGGCTCTATGGGAGGACTGTCTTTTG +
Preference number: 3 (lower is better)
Translates to: LVSGISKKTFQL*EVQALWEDCLL
Trigger: CAAAAGACAGTCCTCCCATAGAGCCTGGACTTCTCACAGCTGAAACGTTTTCTTGGAAATCCCTGAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 72 bp ATAGTTAGGCTAAATACCAAACTTCTCTGCAGTACATaGTGGAGTGACCTCCCACACACTGCAGTCATGGTG +
Preference number: 3 (lower is better)
Translates to: IVRLNTKLLCST*WSDLPHTAVMV
Trigger: CACCATGACTGCAGTGTGTGGGAGGTCACTCCAGCATGTACTGCAGAGAAGTTTGGTATTTAGCCTAACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 72 bp TGTAGTAATCTCGGATTTCCTTTATGGCAAAGGAATTaGATGGAGAGTCTCGAGAGAGGCATGGCAGTGGAG +
Preference number: 3 (lower is better)
Translates to: CSNLGFPLWQRN*MESLERGMAVE
Trigger: CTCCACTGCCATGCCTCTCTCGAGACTCTCCATGCAATTCCTTTGCCATAAAGGAAATCCGAGATTACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp TGTTCCGTAAATCGGCAGCTCTCTGGTTCAAAGTTGGGCAGTACAACGTGTTCACAGAATTCTTTGAGTTaGGTTCTTTTACGCCACGTG +
Preference number: 3 (lower is better)
Translates to: CSVNRQLSGSKLGSTTCSQNSLS*VLLRHV
Trigger: CACGTGGCGTAAAAGAACCAAACTCAAAGAATTCTG...TGAACACGTTGTACTGCCCAACTTTGAACCAGAGAGCTGCCGATTTACGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp CACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCAACCTGCAGAATTCTTaGAGTTTGGTTCTTTTACGC +
Preference number: 3 (lower is better)
Translates to: HFRYSWILPHPSSLWSIANLQNS*SLVLLR
Trigger: GCGTAAAAGAACCAAACTCAAAGAATTCTGCAGGTT...GGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR CAA 90 bp CCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCAACCTGCAGAATTCTTaGAGTTTGGTTCTTTTACGC +
Preference number: 3 (lower is better)
Translates to: PLSLLVDFATSLKPLVNCNLQNS*SLVLLR
Trigger: GCGTAAAAGAACCAAACTCAAAGAATTCTGCAGGTT...GCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR CAA 90 bp TGTTCCGTAAATCGGCAGCTCTCTGGTTCAAAGTTGGGCAGTACAACGTGTTCAATGTTTCCAAAATTGTaGGAGATCGTGTACGAGGTC +
Preference number: 3 (lower is better)
Translates to: CSVNRQLSGSKLGSTTCSMFPKL*EIVYEV
Trigger: GACCTCGTACACGATCTCCAACAATTTTGGAAACAT...TGAACACGTTGTACTGCCCAACTTTGAACCAGAGAGCTGCCGATTTACGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp GTCTCCTCTACCAGGTTGTCGTATCGTGAGAGCAGGGATATTCATGGTCCTCCAGCTCAAGCAGTATTGTaGACTAAATATATTCCCAGA +
Preference number: 3 (lower is better)
Translates to: VSSTRLSYRESRDIHGPPAQAVL*TKYIPR
Trigger: TCTGGGAATATATTTAGTCAACAATACTGCTTGAGC...TGGAGGACCATGAATATCCCTGCTCTCACGATACGACAACCTGGTAGAGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp ACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGTCAGAAGACTTTTCTTaGCCTTTCCTTGTTGTTTTG +
Preference number: 3 (lower is better)
Translates to: TPHSLILFVSSLCSLNLQSEDFS*PFLVVL
Trigger: CAAAACAACAAGGAAAGGCAAAGAAAAGTCTTCTGA...CTGCAGGTTCAGAGAGCAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp ACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGAATAATTCTGATTCATaGTGTTCAGTGACCAACCTC +
Preference number: 3 (lower is better)
Translates to: TPHSLILFVSSLCSLNLQNNSDS*CSVTNL
Trigger: GAGGTTGGTCACTGAACACAATGAATCAGAATTATT...CTGCAGGTTCAGAGAGCAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 72 bp GTTCAAAGTTGGGCAGTACAACGTGTTCATCCCCAATaGCAAATGACACCATGCTGCAGATGTGTATGGAGT +
Preference number: 3 (lower is better)
Translates to: VQSWAVQRVHPQ*QMTPCCRCVWS
Trigger: ACTCCATACACATCTGCAGCATGGTGTCATTTGTCATTGGGGATGAACACGTTGTACTGCCCAACTTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 72 bp GACTGGGAGCTCAAACCTTTCTCACTCTTCAAGAAGTaGAATGCTGGGATTATAGCTTGGCCTTTTCCAGTG +
Preference number: 3 (lower is better)
Translates to: DWELKPFSLFKK*NAGIIAWPFPV
Trigger: CACTGGAAAAGGCCAAGCTATAATCCCAGCATTTCACTTCTTGAAGAGTGAGAAAGGTTTGAGCTCCCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 72 bp GAGGTCTGTATTGCAGAAGAACAATCTGATAGGGACTaGACAGAGTACTGCACTTCTGATGAGGGTCTTGAA +
Preference number: 3 (lower is better)
Translates to: EVCIAEEQSDRD*TEYCTSDEGLE
Trigger: TTCAAGACCCTCATCAGAAGTGCAGTACTCTGTGCAGTCCCTATCAGATTGTTCTTCTGCAATACAGACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CCA 72 bp GCTCAAACCTTTCTCACTCTTCAAGAAGTGAAATGCTaGGATTATAGCTTGGCCTTTTCCAGTGGAGCTCAC +
Preference number: 3 (lower is better)
Translates to: AQTFLTLQEVKC*DYSLAFSSGAH
Trigger: GTGAGCTCCACTGGAAAAGGCCAAGCTATAATCCCAGCATTTCACTTCTTGAAGAGTGAGAAAGGTTTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CCA 72 bp GACCAATGTCTTGTATTGCACTTACAGCTCTACCCTTaGGGGATTTCTGAATTCCCTGAGCAGCTTTCTTCT +
Preference number: 3 (lower is better)
Translates to: DQCLVLHLQLYP*GISEFPEQLSS
Trigger: AGAAGAAAGCTGCTCAGGGAATTCAGAAATCCCCCAAGGGTAGAGCTGTAAGTGCAATACAAGACATTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp TATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAACCATCCCCATTCTTTTaGGCACCAAGGACTGGTTTC +
Preference number: 3 (lower is better)
Translates to: YPGLHPLTSTALLGQCFEPSPFF*APRTGF
Trigger: GAAACCAGTCCTTGGTGCCAAAAAGAATGGGGATGG...TTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp CTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGATAAGGCACCACTTTTaGGAACACCTTTGGCACTTG +
Preference number: 3 (lower is better)
Translates to: LLLIQFICLQQRICICFPIRHHF*EHLWHL
Trigger: CAAGTGCCAAAGGTGTTCCAAAAAGTGGTGCCTTAT...CGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 72 bp CTGTCTGGCTATGTGTTGCAGTTTCATCAGTTTCACTaGCGGAAGGTAAATCAGATCCTGGAGGTATTCCTT +
Preference number: 3 (lower is better)
Translates to: LSGYVLQFHQFH*RKVNQILEVFL
Trigger: AAGGAATACCTCCAGGATCTGATTTACCTTCCGTCAGTGAAACTGATGAAACTGCAACACATAGCCAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 72 bp CTTTCAGTGCTTGAACAAATGTCAGCTGGCTTTCAGTaGGAGGCCAACTGTTATACAACACCGAACACTGTA +
Preference number: 3 (lower is better)
Translates to: LSVLEQMSAGFQ*EANCYTTPNTV
Trigger: TACAGTGTTCGGTGTTGTATAACAGTTGGCCTCTCACTGAAAGCCAGCTGACATTTGTTCAAGCACTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CCA 72 bp TCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTaGTCAATGTTTCGAATGCTAAGGACTCTGGTCCTA +
Preference number: 3 (lower is better)
Translates to: SRTSSFNFNRSS*SMFRMLRTLVL
Trigger: TAGGACCAGAGTCCTTAGCATTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR TCA 72 bp TATTTCCATGGACTTGGTTTGGGGATGGTTTCAGGATaGAACTGTTCCACCTCAGATCATCAGGCATTAGAT +
Preference number: 3 (lower is better)
Translates to: YFHGLGLGMVSG*NCSTSDHQALD
Trigger: ATCTAATGCCTGATGATCTGAGGTGGAACAGTTTCATCCTGAAACCATCCCCAAACCAAGTCCATGGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR TCA 72 bp ATACACTTCTTGCTCTTTCTTGGATGCAGAGTGAAATaGAAGAATGTGCTTGCTAGACTGGGAGCTCAAACC +
Preference number: 3 (lower is better)
Translates to: IHFLLFLGCRVK*KNVLARLGAQT
Trigger: GGTTTGAGCTCCCAGTCTAGCAAGCACATTCTTTCATTTCACTCTGCATCCAAGAAAGAGCAAGAAGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CCA 72 bp AGTTCTTCCTGTGACTTTTCCTGTGTTGCTGTGGTCTaGCTGACTATCTCTCTTTCCAAGTTTAATCCATCA +
Preference number: 3 (lower is better)
Translates to: SSSCDFSCVAVV*LTISLSKFNPS
Trigger: TGATGGATTAAACTTGGAAAGAGAGATAGTCAGCCAGACCACAGCAACACAGGAAAAGTCACAGGAAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CCA 72 bp GGTTTCACAAAAGACAATATTTCCATGGACTTGGTTTaGGGATGGTTTCAGGATGAAACTGTTCCACCTCAG +
Preference number: 3 (lower is better)
Translates to: GFTKDNISMDLV*GWFQDETVPPQ
Trigger: CTGAGGTGGAACAGTTTCATCCTGAAACCATCCCCAAACCAAGTCCATGGAAATATTGTCTTTTGTGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CCA 72 bp GGACTGGTTTCACAAAAGACAATATTTCCATGGACTTaGTTTGGGGATGGTTTCAGGATGAAACTGTTCCAC +
Preference number: 3 (lower is better)
Translates to: GLVSQKTIFPWT*FGDGFRMKLFH
Trigger: GTGGAACAGTTTCATCCTGAAACCATCCCCAAACCAAGTCCATGGAAATATTGTCTTTTGTGAAACCAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CCA 72 bp TTCAGTGACCAACCTCAAAATCCAGTAGGGTTTATTTaGGTCTTCTTGTTGAGGGTGAACAGTGGATATCTG +
Preference number: 3 (lower is better)
Translates to: FSDQPQNPVGFI*VFLLRVNSGYL
Trigger: CAGATATCCACTGTTCACCCTCAACAAGAAGACCCAAATAAACCCTACTGGATTTTGAGGTTGGTCACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp TCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAATGGAGATGTTTCCAAAATaGTTGGAGATCGTGTACGAG +
Preference number: 3 (lower is better)
Translates to: SRTSSFNFNRSSWSMFRMEMFPK*LEIVYE
Trigger: CTCGTACACGATCTCCAACAATTTTGGAAACATCTC...CATTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR CAA 90 bp ATTGTGTTCAGTGACCAACCTCAAAATCCAGTAGGGTTTATTTGGGTCTTCTTGCTTCAACCGCTCTTCTaGGTCAATGTTTCGAATGCT +
Preference number: 3 (lower is better)
Translates to: IVFSDQPQNPVGFIWVFLLQPLF*VNVSNA
Trigger: AGCATTCGAAACATTGACCAAGAAGAGCGGTTGAAG...CAAGAAGACCCAAATAAACCCTACTGGATTTTGAGGTTGGTCACTGAACACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp TATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAACTGTCTGGCTATGTGTaGCAGTTTCATCAGTTTCAC +
Preference number: 3 (lower is better)
Translates to: YPGLHPLTSTALLGQCFELSGYV*QFHQFH
Trigger: GTGAAACTGATGAAACTGCAACACATAGCCAGACAG...TTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 72 bp GACAGGGTAGTGAGCTGTTTGCAGATCCTTCAAAGCTaGAGAGAGTTTACCCTTATCTTTGAAATTAGCAAT +
Preference number: 3 (lower is better)
Translates to: DRVVSCLQILQS*REFTLIFEISN
Trigger: ATTGCTAATTTCAAAGATAAGGGTAAACTCTCTGCAGCTTTGAAGGATCTGCAAACAGCTCACTACCCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CCA 72 bp ACAAAAGACAATATTTCCATGGACTTGGTTTGGGGATaGTTTCAGGATGAAACTGTTCCACCTCAGATCATC +
Preference number: 3 (lower is better)
Translates to: TKDNISMDLVWG*FQDETVPPQII
Trigger: GATGATCTGAGGTGGAACAGTTTCATCCTGAAACCATCCCCAAACCAAGTCCATGGAAATATTGTCTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CCA 72 bp GAAGTTACTGAAGATTTTTGTCCCTCACTAATAGTGTaGGAGTCTGGGCTTCCTAAGTTAATTAACTCCTCG +
Preference number: 3 (lower is better)
Translates to: EVTEDFCPSLIV*ESGLPKLINSS
Trigger: CGAGGAGTTAATTAACTTAGGAAGCCCAGACTCCCACACTATTAGTGAGGGACAAAAATCTTCAGTAACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp CTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGAACATATGTACGAGGTCCTGTTaGAATGTTTTCCTTCCGTGT +
Preference number: 3 (lower is better)
Translates to: LIQFICLQQRICICFPNICTRSC*NVFLPC
Trigger: ACACGGAAGGAAAACATTCAAACAGGACCTCGTACA...TATGTTCGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR-3UTR CAA 90 bp TTTCATAATCAACAGAGACTGTTCCGTAAATCGGCAGCTCTCTGGTTCAAAGTTCAGGAGCCTTTAGTGTaGTCAAAGAACTTTCAGGTT +
Preference number: 3 (lower is better)
Translates to: FHNQQRLFRKSAALWFKVQEPLV*SKNFQV
Trigger: AACCTGAAAGTTCTTTGACAACACTAAAGGCTCCTG...AACTTTGAACCAGAGAGCTGCCGATTTACGGAACAGTCTCTGTTGATTATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp TATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAAGAACACCTTTGGCACTaGCTCCATTGTGTCATTATT +
Preference number: 3 (lower is better)
Translates to: YPGLHPLTSTALLGQCFEEHLWH*LHCVII
Trigger: AATAATGACACAATGGAGCAAGTGCCAAAGGTGTTC...TTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 72 bp AGTTCCTCTCCACATGGCTTGAATTTTAATTGCTGCTaGTACTTCCTCAGCAGAATACTCTTTATCACTTGT +
Preference number: 3 (lower is better)
Translates to: SSSPHGLNFNCC*YFLSRILFITC
Trigger: ACAAGTGATAAAGAGTATTCTGCTGAGGAAGTAGCAGCAGCAATTAAAATTCAAGCCATGTGGAGAGGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 72 bp GTAAGTTCCTCTCCACATGGCTTGAATTTTAATTGCTaGTGCTACTTCCTCAGCAGAATACTCTTTATCACT +
Preference number: 3 (lower is better)
Translates to: VSSSPHGLNFNC*CYFLSRILFIT
Trigger: AGTGATAAAGAGTATTCTGCTGAGGAAGTAGCAGCAGCAATTAAAATTCAAGCCATGTGGAGAGGAACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR GCA 72 bp AACGTAAGTTCCTCTCCACATGGCTTGAATTTTAATTaGTGCTGCTACTTCCTCAGCAGAATACTCTTTATC +
Preference number: 3 (lower is better)
Translates to: NVSSSPHGLNFN*CCYFLSRILFI
Trigger: GATAAAGAGTATTCTGCTGAGGAAGTAGCAGCAGCAATTAAAATTCAAGCCATGTGGAGAGGAACTTACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp TTTCATAATCAACAGAGACTGTTCCGTAAATCGGCAGCTCTCTGGTTCAAAGTTCAAGCTCAAGCAGTATaGTTGACTAAATATATTCCC +
Preference number: 3 (lower is better)
Translates to: FHNQQRLFRKSAALWFKVQAQAV*LTKYIP
Trigger: GGGAATATATTTAGTCAACAATACTGCTTGAGCTTG...AACTTTGAACCAGAGAGCTGCCGATTTACGGAACAGTCTCTGTTGATTATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR-3UTR CAA 90 bp GTGGACGTTTCCAGGAATAAATTTTCAAGGATGGTGGTAACTCAATCTTTCCTTGAATTTCCCCTTCTTTaGTTCAGTAGAACCAGATTG +
Preference number: 3 (lower is better)
Translates to: VDVSRNKFSRMVVTQSFLEFPLL*FSRTRL
Trigger: CAATCTGGTTCTACTGAACAAAAGAAGGGGAAATTC...AAGGAAAGATTGAGTTACCACCATCCTTGAAAATTTATTCCTGGAAACGTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522396.5
3UTR GCA 72 bp ATTGCTCAAAATTCCTCCATTGAAGATCTTCCACACTaGATAGATTTCACTGATAATCCATCTCATCAGCTC +
Preference number: 3 (lower is better)
Translates to: IAQNSSIEDLPH*IDFTDNPSHQL
Trigger: GAGCTGATGAGATGGATTATCAGTGAAATCTATGCAGTGTGGAAGATCTTCAATGGAGGAATTTTGAGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522396.5
3UTR TCA 72 bp ACCTGTGAGTTGCTTATTCACACTTTGGAACTCAAATaGAGTAAAAGGTTAGGGAAGAGTTCAATTTTTAAC +
Preference number: 3 (lower is better)
Translates to: TCELLIHTLELK*SKRLGKSSIFN
Trigger: GTTAAAAATTGAACTCTTCCCTAACCTTTTACTTCATTTGAGTTCCAAAGTGTGAATAAGCAACTCACAGGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp CACCTTTGCCTGCATCCCACTTTTCTGAATTTATGTCAGCTTCACTCCACTCTGTGTAGGGCTGAGCTCTaGGCAAAGAGCCTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: HLCLHPTFLNLCQLHSTLCRAEL*AKSLRA
Trigger: CGCCCGCAGGCTCTTTGCTCAGAGCTCAGCCCTACA...CAGAGTGGAGTGAAGCTGACATAAATTCAGAAAAGTGGGATGCAGGCAAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR TCA 90 bp CACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCATGCTGCTGCTGATCTaGCAGGAGGCAGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: HFRYSWILPHPSSLWSIAMLLLI*QEAELR
Trigger: CCTGAGCTCTGCCTCCTGTCAGATCAGCAGCAGCAT...GGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp TGGTGCTACCAGAGGACAAGACCTACTTCTAGTCACCAGCACAGGATGGCTACACAGTACATGCTGGAGTaGCCTCCCACACACTGCAGT +
Preference number: 4 (lower is better)
Translates to: WCYQRTRPTSSHQHRMATQYMLE*PPTHCS
Trigger: ACTGCAGTGTGTGGGAGGTCACTCCAGCATGTACTG...TGTAGCCATCCTGTGCTGGTGACTAGAAGTAGGTCTTGTCCTCTGGTAGCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CAA 72 bp CAGGCCTCGGACCAGGACCAGTCCATGGCTCTGGAGTaGGGGACTGCAGATTTAGAGCATGTTCAAAACATA +
Preference number: 4 (lower is better)
Translates to: QASDQDQSMALE*GTADLEHVQNI
Trigger: TATGTTTTGAACATGCTCTAAATCTGCAGTCCCCAACTCCAGAGCCATGGACTGGTCCTGGTCCGAGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp ACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGATCCGTGCGCCGAGTTaGTACGATGCACCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TPHSLILFVSSLCSLNLQIRAPS*YDAPLS
Trigger: AGAAAGAGGTGCATCGTATCAACTCGGCGCACGGAT...CTGCAGGTTCAGAGAGCAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp TCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCACGCAGTTTCCATCGTaGGGCTGCTACATATGTGTC +
Preference number: 4 (lower is better)
Translates to: SCTRSCLNVFLPCALLALTQFPS*GCYICV
Trigger: GACACATATGTAGCAGCCTCACGATGGAAACTGCGT...GAGCGCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp TGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTGAAGACACTCCTGGGTGGTGGCATTTaGCCTGTGAGTTGCTTATTC +
Preference number: 4 (lower is better)
Translates to: CFPSVCSARALLSLVKTLLGGGI*PVSCLF
Trigger: GAATAAGCAACTCACAGGTCAAATGCCACCACCCAG...GAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp GGTCTTCTTGTTGAGGGTGAACAGTGGATATCTGAGGCTCAAAGCGAGGTGCTTTCCTTCCGTGTGCTCTaGTCGCGCTCTTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: GLLVEGEQWISEAQSEVLSFRVL*SRSSFP
Trigger: AGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGA...AAGCACCTCGCTTTGAGCCTCAGATATCCACTGTTCACCCTCAACAAGAAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp GTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCCCGCTAACCTCCTGCTaGATGGCCCAGTTCCTAACA +
Preference number: 4 (lower is better)
Translates to: VDFATSLKPLVNCHFFHTPLTSC*MAQFLT
Trigger: TGTTAGGAACTGGGCCATGCAGCAGGAGGTTAGCGG...GGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp GGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCGGATGATAACCGAGTaGTTCCTGGGTGGTGGCATT +
Preference number: 4 (lower is better)
Translates to: GEDTPPLSLLVDFATSLKRMITE*FLGGGI
Trigger: AATGCCACCACCCAGGAAGCACTCGGTTATCATCCG...CTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp TCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCCCTAAAGAGAAGGGATaGCGGATGATAACCGAGTGC +
Preference number: 4 (lower is better)
Translates to: SCTRSCLNVFLPCALLALPKEKG*RMITEC
Trigger: GCACTCGGTTATCATCCGGCATCCCTTCTCTTTAGG...GAGCGCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp GGTTTTGGTGGTGCTACCAGAGGACAAGACCTACTTCTAGTCACCAGCACAGGACCCAGGCTTGTTTCATaGCTCGGATTTCATCTGCCC +
Preference number: 4 (lower is better)
Translates to: GFGGATRGQDLLLVTSTGPRLVS*LGFHLP
Trigger: GGGCAGATGAAATCCGAGCCATGAAACAAGCCTGGG...TCCTGTGCTGGTGACTAGAAGTAGGTCTTGTCCTCTGGTAGCACCACCAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp GAGATCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCGTCACCAGCACAGGATaGCTACAGATGTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: EIVYEVLFECFPSVCSARVTSTG*LQMWES
Trigger: GCTTTCCCACATCTGTAGCCATCCTGTGCTGGTGAC...GCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp AATTGCCACTTCTTCCACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTTGGAGCCTGAGAAGCCTTaGTTGCTCTTCCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: NCHFFHTALPDPVCVISLEPEKP*LLFLAQ
Trigger: CTGAGCCAGGAAGAGCAATCAAGGCTTCTCAGGCTC...CAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp TGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTGAAGACACTCGTACGAGGTCCTGTTTaGATGTTTTCCTTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: CFPSVCSARALLSLVKTLVRGPV*MFSFRV
Trigger: CACACGGAAGGAAAACATTCAAACAGGACCTCGTAC...GAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp CCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCGAGCAGAAGAACCGATaGGACGCAGTTTCCATCGTG +
Preference number: 4 (lower is better)
Translates to: PLSLLVDFATSLKPLVNCEQKNR*DAVSIV
Trigger: CACGATGGAAACTGCGTCTCATCGGTTCTTCTGCTC...GCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp CCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCTGGGGAGTATGCGTTaGAGAGTAGCATGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PLSLLVDFATSLKPLVNCLGSMR*RVACVS
Trigger: GGAGACACATGCTACTCTTCAACGCATACTCCCCAG...GCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp CTGATAATCCATCTCATCAGCTCGCTGCAGAGTAAATGTTCATTTGCTGAAAATTCTGAGCAAAGAGCCTaGGGGCGCGCTCGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: LIIHLISSLQSKCSFAENSEQRA*GRARLR
Trigger: GCGGAGCCGAGCGCGCCCGCAGGCTCTTTGCTCAGA...ATTTTCAGCAAATGAACATTTACTCTGCAGCGAGCTGATGAGATGGATTATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR CCA 90 bp TCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCGCACTCCCTGATCCTCACTTTCGCTACTCGTaGATTTTGCCACATCCCTCA +
Preference number: 4 (lower is better)
Translates to: SLKPLVNCHFFHTALPDPHFRYS*ILPHPS
Trigger: TGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTG...AGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp TTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTGAAGACACTCCTTCTTTTTGGTTTGTTTaGAGGCCATGGCAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: FSFRVLCSRSSFPGEDTPSFWFV*RPWQKP
Trigger: CGGCTTCTGCCATGGCCTCCAAACAAACCAAAAAGA...AGGAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp GGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGAGGAGGTGGTTTTGGTaGTGCTACCAGAGGACAAGA +
Preference number: 4 (lower is better)
Translates to: GEDTPPLSLLVDFATSLKRRWFW*CYQRTR
Trigger: TCTTGTCCTCTGGTAGCACCACCAAAACCACCTCCT...CTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp TCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCAAATCGGCAGCTCTCTaGTTCAAAGTTGGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: SCTRSCLNVFLPCALLALKSAAL*FKVGQY
Trigger: GTACTGCCCAACTTTGAACCAGAGAGCTGCCGATTT...GAGCGCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp TGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTGAAGACACTCTGCATTGCCTGCTGCTaGTTCAATTCATCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: CFPSVCSARALLSLVKTLCIACC*FNSSVC
Trigger: GCAAACAGATGAATTGAATCAGCAGCAGGCAATGCA...GAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp CCTTTGCCTGCATCCCACTTTTCTGAATTTATGTCAGCTTCACTCCACTCTGGCATCCGTGCGCCGAGTTaGTACGATGCACCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PLPASHFSEFMSASLHSGIRAPS*YDAPLS
Trigger: AGAAAGAGGTGCATCGTATCAACTCGGCGCACGGAT...GCCAGAGTGGAGTGAAGCTGACATAAATTCAGAAAAGTGGGATGCAGGCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR TCA 90 bp GTCTCCTCTACCAGGTTGTCGTATCGTGAGAGCAGGGATATTCATGGTCCTCCAAAAACGTTTCAGCTGTaGGAAGTCCAGGCTCTATGG +
Preference number: 4 (lower is better)
Translates to: VSSTRLSYRESRDIHGPPKTFQL*EVQALW
Trigger: CCATAGAGCCTGGACTTCTCACAGCTGAAACGTTTT...TGGAGGACCATGAATATCCCTGCTCTCACGATACGACAACCTGGTAGAGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp AATTGCCACTTCTTCCACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTTGCTGGGGAGTATGCGTTaGAGAGTAGCATGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: NCHFFHTALPDPVCVISLLGSMR*RVACVS
Trigger: GGAGACACATGCTACTCTTCAACGCATACTCCCCAG...CAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp TCTTTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACACAGGTTGTCGTATCGTaGGAGCAGGGATATTCATGG +
Preference number: 4 (lower is better)
Translates to: SFPGEDTPPLSLLVDFATQVVVS*EQGYSW
Trigger: CCATGAATATCCCTGCTCTCACGATACGACAACCTG...TGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp GAGATCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCGCTACTCGTGGATTTTaGCACATCCCTCAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: EIVYEVLFECFPSVCSARATRGF*HIPQAF
Trigger: AAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGC...GCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp TCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCCGCCTTTTGCATTaGCTGCTGCTGATTCAATTC +
Preference number: 4 (lower is better)
Translates to: SCTRSCLNVFLPCALLALFRLLH*LLLIQF
Trigger: GAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAA...GAGCGCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp CCGCTCTTCTTGGTCAATGTTTCGAATGCTAAGGACTCTGGTCCTATGCTGTCGGATTTATCCGATCCGTaGGCCGAGTTGATACGATGC +
Preference number: 4 (lower is better)
Translates to: PLFLVNVSNAKDSGPMLSDLSDP*AELIRC
Trigger: GCATCGTATCAACTCGGCGCACGGATCGGATAAATC...CGACAGCATAGGACCAGAGTCCTTAGCATTCGAAACATTGACCAAGAAGAGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp TCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCGCACTCCCTGATCCTTCTTCAGAACAAGACTaGCTGGTTTCAGGGATTTCC +
Preference number: 4 (lower is better)
Translates to: SLKPLVNCHFFHTALPDPSSEQD*LVSGIS
Trigger: GGAAATCCCTGAAACCAGGCAGTCTTGTTCTGAAGA...AGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp TTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTCTTCTCTGCAGTACATaGTGGAGTGACCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: FRYSWILPHPSSLWSIATLLCST*WSDLPH
Trigger: GTGTGGGAGGTCACTCCAGCATGTACTGCAGAGAAG...AGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp TTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTGAAGACACTCCTGGATGGCTACAGATGTaGGAAAGCCCATATTCTCTA +
Preference number: 4 (lower is better)
Translates to: FSFRVLCSRSSFPGEDTPGWLQM*ESPYSL
Trigger: TAGAGAATATGGGCTTTCCCACATCTGTAGCCATCC...AGGAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp TCTTTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACAGGCAAAGGAATTGCATaGAGAGTCTCGAGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: SFPGEDTPPLSLLVDFATGKGIA*RVSREA
Trigger: TGCCTCTCTCGAGACTCTCCATGCAATTCCTTTGCC...TGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp TCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCGCACTCCCTGATCCTCTTGATGAATGCATCTaGTTTGGATGTGCGTACCTG +
Preference number: 4 (lower is better)
Translates to: SLKPLVNCHFFHTALPDPLDECI*FGCAYL
Trigger: CAGGTACGCACATCCAAACCAGATGCATTCATCAAG...AGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp GTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCGCTGGGATTATAGCTTaGCCTTTTCCAGTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: VDFATSLKPLVNCHFFHTAGIIA*PFPVEL
Trigger: GAGCTCCACTGGAAAAGGCCAAGCTATAATCCCAGC...GGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp GAGATCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCTATGGAGTGTCCTACTaGGGAGTATGCGTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: EIVYEVLFECFPSVCSARYGVSY*GVCVEE
Trigger: CTCTTCAACGCATACTCCCCAGTAGGACACTCCATA...GCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR CAA 72 bp GTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTaGCCACATCCCTCAAGCCTTTGGTCAATTGCCACT +
Preference number: 4 (lower is better)
Translates to: VKTLLHFRYSWI*PHPSSLWSIAT
Trigger: AGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp CCTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCTTCATGGCTGCTTCCTaGGCAGCCAGAGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PAADSIHLFAAEDLYLFSFMAAS*AARVSS
Trigger: GCTGGAAACTCTGGCTGCTCAGGAAGCAGCCATGAA...GGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp CCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCAAAACGTTTCAGCTGTaGGAAGTCCAGGCTCTATGG +
Preference number: 4 (lower is better)
Translates to: PLSLLVDFATSLKPLVNCKTFQL*EVQALW
Trigger: CCATAGAGCCTGGACTTCTCACAGCTGAAACGTTTT...GCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp TGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTGAAGACACTCACAGCCCAAACTTTTTaGAGAGTATCTGCAACACTG +
Preference number: 4 (lower is better)
Translates to: CFPSVCSARALLSLVKTLTAQTF*RVSATL
Trigger: CAGTGTTGCAGATACTCTTCAAAAAGTTTGGGCTGT...GAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp CCGCTCTTCTTGGTCAATGTTTCGAATGCTAAGGACTCTGGTCCTATGCTGTCGTCAGCTGGCTTTCAGTaGGAGGCCAACTGTTATACA +
Preference number: 4 (lower is better)
Translates to: PLFLVNVSNAKDSGPMLSSAGFQ*EANCYT
Trigger: TGTATAACAGTTGGCCTCTCACTGAAAGCCAGCTGA...CGACAGCATAGGACCAGAGTCCTTAGCATTCGAAACATTGACCAAGAAGAGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp CGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTAAGCCTTTGGTCAATTaGCACTTCTTCCACACCGCA +
Preference number: 4 (lower is better)
Translates to: RYSWILPHPSSLWSIATSKPLVN*HFFHTA
Trigger: TGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTT...AGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp CGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTGCTACTCGTGGATTTTaGCACATCCCTCAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: RYSWILPHPSSLWSIATSATRGF*HIPQAF
Trigger: AAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGC...AGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp TGGTGCTACCAGAGGACAAGACCTACTTCTAGTCACCAGCACAGGATGGCTACATTCCGCCTTTTGCATTaGCTGCTGCTGATTCAATTC +
Preference number: 4 (lower is better)
Translates to: WCYQRTRPTSSHQHRMATFRLLH*LLLIQF
Trigger: GAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAA...TGTAGCCATCCTGTGCTGGTGACTAGAAGTAGGTCTTGTCCTCTGGTAGCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp CCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCGACTGCACAGAGTACTaGACTTCTGATGAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: PLSLLVDFATSLKPLVNCDCTEY*TSDEGL
Trigger: AAGACCCTCATCAGAAGTGCAGTACTCTGTGCAGTC...GCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp GAGATCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCTGTGTCGCCTGTAAATaGTTCCGCCACAAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: EIVYEVLFECFPSVCSARCVACK*FRHKSV
Trigger: TACACTTTTGTGGCGGAAGCATTTACAGGCGACACA...GCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp GTCTCCTCTACCAGGTTGTCGTATCGTGAGAGCAGGGATATTCATGGTCCTCCATGTGTCGCCTGTAAATaGTTCCGCCACAAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: VSSTRLSYRESRDIHGPPCVACK*FRHKSV
Trigger: TACACTTTTGTGGCGGAAGCATTTACAGGCGACACA...TGGAGGACCATGAATATCCCTGCTCTCACGATACGACAACCTGGTAGAGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp TTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTGAAGACACTCCTTTATGGCAAAGGAATTaGATGGAGAGTCTCGAGAGA +
Preference number: 4 (lower is better)
Translates to: FSFRVLCSRSSFPGEDTPLWQRN*MESLER
Trigger: TCTCTCGAGACTCTCCATGCAATTCCTTTGCCATAA...AGGAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp TCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCCTTCAAGAAGTGAAATaGTGGGATTATAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SCTRSCLNVFLPCALLALLQEVK*WDYSLA
Trigger: GGCCAAGCTATAATCCCAGCATTTCACTTCTTGAAG...GAGCGCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp GTCTCCTCTACCAGGTTGTCGTATCGTGAGAGCAGGGATATTCATGGTCCTCCACCAGTAGGGTTTATTTaGGTCTTCTTGTTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VSSTRLSYRESRDIHGPPPVGFI*VFLLRV
Trigger: CACCCTCAACAAGAAGACCCAAATAAACCCTACTGG...TGGAGGACCATGAATATCCCTGCTCTCACGATACGACAACCTGGTAGAGGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp ATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCGCACTGTGTTGCTGTGGTCTaGCTGACTATCTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: ILPHPSSLWSIATSSTPHCVAVV*LTISLS
Trigger: GGAAAGAGAGATAGTCAGCCAGACCACAGCAACACA...GTGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp GAGATCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCGAAGTCCAGGCTCTATaGGAGGACTGTCTTTTGTTA +
Preference number: 4 (lower is better)
Translates to: EIVYEVLFECFPSVCSAREVQAL*EDCLLL
Trigger: TAACAAAAGACAGTCCTCCCATAGAGCCTGGACTTC...GCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp GGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCTTGTAATTCTGCAGTaGTGTGCTGGAACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GEDTPPLSLLVDFATSLKLVILQ*CAGTVF
Trigger: GAAGACAGTTCCAGCACACCACTGCAGAATTACAAG...CTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp ACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGACCTGCAGAATTCTTTaGGTTTGGTTCTTTTACGCC +
Preference number: 4 (lower is better)
Translates to: TPHSLILFVSSLCSLNLQTCRIL*VWFFYA
Trigger: GGCGTAAAAGAACCAAACTCAAAGAATTCTGCAGGT...CTGCAGGTTCAGAGAGCAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp CGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTGCATTGCCTGCTGCTaGTTCAATTCATCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: RYSWILPHPSSLWSIATSCIACC*FNSSVC
Trigger: GCAAACAGATGAATTGAATCAGCAGCAGGCAATGCA...AGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp TTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTGAAGACACTCCTTGCATCCCACTTTTCTaGATTTATGTCAGCTTCACT +
Preference number: 4 (lower is better)
Translates to: FSFRVLCSRSSFPGEDTPCIPLF*IYVSFT
Trigger: AGTGAAGCTGACATAAATTCAGAAAAGTGGGATGCA...AGGAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp AATTGCCACTTCTTCCACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTTGTTGCTGTGGTCTGGCTaGCTATCTCTCTTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: NCHFFHTALPDPVCVISLLLWSG*LSLFPS
Trigger: ACTTGGAAAGAGAGATAGTCAGCCAGACCACAGCAA...CAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp GGTTTTGGTGGTGCTACCAGAGGACAAGACCTACTTCTAGTCACCAGCACAGGAGGATGCAGAGTGAAATaGAAGAATGTGCTTGCTAGA +
Preference number: 4 (lower is better)
Translates to: GFGGATRGQDLLLVTSTGGCRVK*KNVLAR
Trigger: TCTAGCAAGCACATTCTTTCATTTCACTCTGCATCC...TCCTGTGCTGGTGACTAGAAGTAGGTCTTGTCCTCTGGTAGCACCACCAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp CCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATTGGTCCTCCAGTTATTaGGCATTTAGAGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: PPFALPAADSIHLFAAEDWSSSY*AFRAAI
Trigger: GATGGCTGCTCTAAATGCTCAATAACTGGAGGACCA...ATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp CCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGCAGCTTGATGAATaGATCTGGTTTGGATGTGCG +
Preference number: 4 (lower is better)
Translates to: PPFALPAADSIHLFAAEDLQLDE*IWFGCA
Trigger: CGCACATCCAAACCAGATGCATTCATCAAGCTGCAG...ATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp GAGATCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCCTTCAAGAAGTGAAATaGTGGGATTATAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: EIVYEVLFECFPSVCSARLQEVK*WDYSLA
Trigger: GGCCAAGCTATAATCCCAGCATTTCACTTCTTGAAG...GCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp GGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCAGATCCTTCAAAGCTaGAGAGAGTTTACCCTTATC +
Preference number: 4 (lower is better)
Translates to: GEDTPPLSLLVDFATSLKQILQS*REFTLI
Trigger: GATAAGGGTAAACTCTCTGCAGCTTTGAAGGATCTG...CTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp GGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGGGCTTGAATTTTAATTaGTGCTGCTACTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GEDTPPLSLLVDFATSLKGLNFN*CCYFLS
Trigger: GCTGAGGAAGTAGCAGCAGCAATTAAAATTCAAGCC...CTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp GGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGTGTTTCCAAAATTGTTaGAGATCGTGTACGAGGTCC +
Preference number: 4 (lower is better)
Translates to: GEDTPPLSLLVDFATSLKCFQNC*RSCTRS
Trigger: GGACCTCGTACACGATCTCCAACAATTTTGGAAACA...CTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp GTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCTTACAGCTCTACCCTTaGGGGATTTCTGAATTCCCT +
Preference number: 4 (lower is better)
Translates to: VDFATSLKPLVNCHFFHTLQLYP*GISEFP
Trigger: AGGGAATTCAGAAATCCCCCAAGGGTAGAGCTGTAA...GGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp TATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAAACCAGGACCAGTCCATaGCTCTGGAGTTGGGGACTG +
Preference number: 4 (lower is better)
Translates to: YPGLHPLTSTALLGQCFETRTSP*LWSWGL
Trigger: CAGTCCCCAACTCCAGAGCCATGGACTGGTCCTGGT...TTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp TCTTTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCATGGACTTGGTTTaGGGATGGTTTCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: SFPGEDTPPLSLLVDFATSMDLV*GWFQDE
Trigger: TTCATCCTGAAACCATCCCCAAACCAAGTCCATGGA...TGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp TATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAACCACACCGCACTCCCTaGTCCTGTTTGTGTCATCTC +
Preference number: 4 (lower is better)
Translates to: YPGLHPLTSTALLGQCFEPHRTP*SCLCHL
Trigger: GAGATGACACAAACAGGATCAGGGAGTGCGGTGTGG...TTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp TCTGAACCTGCAGAATTCTTTGAGTTTGGTTCTTTTACGCCACGTGCAGCTGTTCTCTTCTTTCCCTGGTaGAGACACTCCTCCACTTTC +
Preference number: 4 (lower is better)
Translates to: SEPAEFFEFGSFTPRAAVLFFPW*RHSSTF
Trigger: GAAAGTGGAGGAGTGTCTTCACCAGGGAAAGAAGAG...AACAGCTGCACGTGGCGTAAAAGAACCAAACTCAAAGAATTCTGCAGGTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp GGTTTTGGTGGTGCTACCAGAGGACAAGACCTACTTCTAGTCACCAGCACAGGAACTTTCCATAGCTATTaGACAAAGGCATATGACCCT +
Preference number: 4 (lower is better)
Translates to: GFGGATRGQDLLLVTSTGTFHSY*TKAYDP
Trigger: AGGGTCATATGCCTTTGTTCAATAGCTATGGAAAGT...TCCTGTGCTGGTGACTAGAAGTAGGTCTTGTCCTCTGGTAGCACCACCAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp CCGCTCTTCTTGGTCAATGTTTCGAATGCTAAGGACTCTGGTCCTATGCTGTCGGCATATACGACCATATaGGAGGTCTGTATTGCAGAA +
Preference number: 4 (lower is better)
Translates to: PLFLVNVSNAKDSGPMLSAYTTI*EVCIAE
Trigger: TTCTGCAATACAGACCTCTCATATGGTCGTATATGC...CGACAGCATAGGACCAGAGTCCTTAGCATTCGAAACATTGACCAAGAAGAGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp GGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGTTCTTGGATGCAGAGTaGAATGAAAGAATGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GEDTPPLSLLVDFATSLKFLDAE*NERMCL
Trigger: CAAGCACATTCTTTCATTTCACTCTGCATCCAAGAA...CTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp GGTCTTCTTGTTGAGGGTGAACAGTGGATATCTGAGGCTCAAAGCGAGGTGCTTGTGGCATTTGACCTGTaGGTTGCTTATTCACACTTT +
Preference number: 4 (lower is better)
Translates to: GLLVEGEQWISEAQSEVLVAFDL*VAYSHF
Trigger: AAAGTGTGAATAAGCAACTCACAGGTCAAATGCCAC...AAGCACCTCGCTTTGAGCCTCAGATATCCACTGTTCACCCTCAACAAGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp TATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAATCCTTCCGTGTGCTCTaGTCGCGCTCTTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: YPGLHPLTSTALLGQCFESFRVL*SRSSFP
Trigger: AGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGA...TTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp CCTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCTGTTTTCCTTCCGTGTaGTCTGCTCGCGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PAADSIHLFAAEDLYLFSCFPSV*SARALL
Trigger: AAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAACA...GGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp TCTTTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATTTGTCCTTTTCTTTTaGACCTTTGCCTGCATCCCA +
Preference number: 4 (lower is better)
Translates to: SFPGEDTPPLSLLVDFATFVLFF*TFACIP
Trigger: TGGGATGCAGGCAAAGGTGCAAAAGAAAAGGACAAA...TGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp TGTTCCGTAAATCGGCAGCTCTCTGGTTCAAAGTTGGGCAGTACAACGTGTTCACAATCTGATAGGGACTaGACAGAGTACTGCACTTCT +
Preference number: 4 (lower is better)
Translates to: CSVNRQLSGSKLGSTTCSQSDRD*TEYCTS
Trigger: AGAAGTGCAGTACTCTGTGCAGTCCCTATCAGATTG...TGAACACGTTGTACTGCCCAACTTTGAACCAGAGAGCTGCCGATTTACGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp TGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTGAAGACACTCAACACCTTTGGCACTTaGTCCATTGTGTCATTATTA +
Preference number: 4 (lower is better)
Translates to: CFPSVCSARALLSLVKTLNTFGT*SIVSLL
Trigger: TAATAATGACACAATGGAGCAAGTGCCAAAGGTGTT...GAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp AATTGCCACTTCTTCCACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTTGCAAATGACACCATGCTaGAGATGTGTATGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: NCHFFHTALPDPVCVISLQMTPC*RCVWSV
Trigger: GACACTCCATACACATCTGCAGCATGGTGTCATTTG...CAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp CGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTCAGATCCTTCAAAGCTaGAGAGAGTTTACCCTTATC +
Preference number: 4 (lower is better)
Translates to: RYSWILPHPSSLWSIATSQILQS*REFTLI
Trigger: GATAAGGGTAAACTCTCTGCAGCTTTGAAGGATCTG...AGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp CACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCGGCTTGAATTTTAATTaGTGCTGCTACTTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: HFRYSWILPHPSSLWSIAGLNFN*CCYFLS
Trigger: GCTGAGGAAGTAGCAGCAGCAATTAAAATTCAAGCC...GGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp AAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAACTTCAACGCACCGCTAACCTCCTaGTGCATGGCCCAGTTCCTA +
Preference number: 4 (lower is better)
Translates to: KESCISLYISRTSSFNFNAPLTS*CMAQFL
Trigger: TAGGAACTGGGCCATGCAGCAGGAGGTTAGCGGTGC...GTTGAAGTTAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp TCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCGCACTCCCTGATCCTTCTTTTGGTTTAGTTTaGCTTTCAGATATAGGCGGA +
Preference number: 4 (lower is better)
Translates to: SLKPLVNCHFFHTALPDPSFGLV*LSDIGG
Trigger: TCCGCCTATATCTGAAAGCCAAACTAAACCAAAAGA...AGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp CTCTTGCATCTGCTTTCTCCTTTGGAACTTTGTCGCTTTTCTCAGGAGCCTTTAGGCAAAGGAATTGCATaGAGAGTCTCGAGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LLHLLSPLELCRFSQEPLGKGIA*RVSREA
Trigger: TGCCTCTCTCGAGACTCTCCATGCAATTCCTTTGCC...TAAAGGCTCCTGAGAAAAGCGACAAAGTTCCAAAGGAGAAAGCAGATGCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp GAGATCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCCAAGAAGTGAAATGCTaGGATTATAGCTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: EIVYEVLFECFPSVCSARQEVKC*DYSLAF
Trigger: AAAGGCCAAGCTATAATCCCAGCATTTCACTTCTTG...GCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp TCTGAACCTGCAGAATTCTTTGAGTTTGGTTCTTTTACGCCACGTGCAGCTGTTTGCTGCAGATGTGTATaGAGTGTCCTACTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: SEPAEFFEFGSFTPRAAVCCRCV*SVLLGS
Trigger: ACTCCCCAGTAGGACACTCCATACACATCTGCAGCA...AACAGCTGCACGTGGCGTAAAAGAACCAAACTCAAAGAATTCTGCAGGTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp GGTCTTCTTGTTGAGGGTGAACAGTGGATATCTGAGGCTCAAAGCGAGGTGCTTTCTCTGGTTCAAAGTTaGGCAGTACAACGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: GLLVEGEQWISEAQSEVLSLVQS*AVQRVH
Trigger: ATGAACACGTTGTACTGCCCAACTTTGAACCAGAGA...AAGCACCTCGCTTTGAGCCTCAGATATCCACTGTTCACCCTCAACAAGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp TTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCAAGACAATATTTCCATaGACTTGGTTTGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: FPGEDTPPLSLLVDFATSKTIFP*TWFGDG
Trigger: ACCATCCCCAAACCAAGTCCATGGAAATATTGTCTT...GGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp GAATTTCTTCCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGTTTGCACTCTGCAGTACATGCTaGAGTGACCTCCCACACACT +
Preference number: 4 (lower is better)
Translates to: EFLPPFALPAADSIHLFALCSTC*SDLPHT
Trigger: AGTGTGTGGGAGGTCACTCCAGCATGTACTGCAGAG...TGCAAACAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp ATTGTGTTCAGTGACCAACCTCAAAATCCAGTAGGGTTTATTTGGGTCTTCTTGCGAGTGCTTCCTGGGTaGTGGCATTTGACCTGTGAG +
Preference number: 4 (lower is better)
Translates to: IVFSDQPQNPVGFIWVFLRVLPG*WHLTCE
Trigger: CTCACAGGTCAAATGCCACCACCCAGGAAGCACTCG...CAAGAAGACCCAAATAAACCCTACTGGATTTTGAGGTTGGTCACTGAACACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CAA 72 bp CACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTaGCTCTCTGAACCTGCAGAATTCTTTGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: HTALPDPVCVIS*LSEPAEFFEFG
Trigger: ACCAAACTCAAAGAATTCTGCAGGTTCAGAGAGCAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp CTTCATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTACCACACCGCACTCCCTaGTCCTGTTTGTGTCATCTC +
Preference number: 4 (lower is better)
Translates to: LHLRSPAFPYTYPGLHPLPHRTP*SCLCHL
Trigger: GAGATGACACAAACAGGATCAGGGAGTGCGGTGTGG...TAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp CATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAACTTTCATGGCTGCTTCCTaGGCAGCCAGAGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: HLRSPAFPYTYPGLHPLTFMAAS*AARVSS
Trigger: GCTGGAAACTCTGGCTGCTCAGGAAGCAGCCATGAA...AGTTAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp GAATTTCTTCCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGTTTGCACGTGTTCATCCCCAATaGCAAATGACACCATGCTGC +
Preference number: 4 (lower is better)
Translates to: EFLPPFALPAADSIHLFARVHPQ*QMTPCC
Trigger: GCAGCATGGTGTCATTTGTCATTGGGGATGAACACG...TGCAAACAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp TTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTAAGTCTTTCAGTGCTTaGACAAATGTCAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FRYSWILPHPSSLWSIATKSFSA*TNVSWL
Trigger: AAGCCAGCTGACATTTGTTCAAGCACTGAAAGACTT...AGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp AATTGCCACTTCTTCCACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTTGCTTGGTTGTCTCAAATaGATAAGCACTCAGACAGAG +
Preference number: 4 (lower is better)
Translates to: NCHFFHTALPDPVCVISLLGCLK*ISTQTE
Trigger: CTCTGTCTGAGTGCTTATTCATTTGAGACAACCAAG...CAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp CTCTTGCATCTGCTTTCTCCTTTGGAACTTTGTCGCTTTTCTCAGGAGCCTTTAAAGCCTTTGGTCAATTaGCACTTCTTCCACACCGCA +
Preference number: 4 (lower is better)
Translates to: LLHLLSPLELCRFSQEPLKPLVN*HFFHTA
Trigger: TGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTT...TAAAGGCTCCTGAGAAAAGCGACAAAGTTCCAAAGGAGAAAGCAGATGCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp CCTTTGCCTGCATCCCACTTTTCTGAATTTATGTCAGCTTCACTCCACTCTGGCTTTGTCCTTTTCTTTTaGACCTTTGCCTGCATCCCA +
Preference number: 4 (lower is better)
Translates to: PLPASHFSEFMSASLHSGFVLFF*TFACIP
Trigger: TGGGATGCAGGCAAAGGTGCAAAAGAAAAGGACAAA...GCCAGAGTGGAGTGAAGCTGACATAAATTCAGAAAAGTGGGATGCAGGCAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR CCA 90 bp TCTGAACCTGCAGAATTCTTTGAGTTTGGTTCTTTTACGCCACGTGCAGCTGTTCATCCCTCAAGCCTTTaGTCAATTGCCACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SEPAEFFEFGSFTPRAAVHPSSL*SIATSS
Trigger: GGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATG...AACAGCTGCACGTGGCGTAAAAGAACCAAACTCAAAGAATTCTGCAGGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp CTCTTGCATCTGCTTTCTCCTTTGGAACTTTGTCGCTTTTCTCAGGAGCCTTTACATCCCTCAAGCCTTTaGTCAATTGCCACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LLHLLSPLELCRFSQEPLHPSSL*SIATSS
Trigger: GGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATG...TAAAGGCTCCTGAGAAAAGCGACAAAGTTCCAAAGGAGAAAGCAGATGCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp CCAAAATTGTTGGAGATCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGTGTTGCTGTGGTCTaGCTGACTATCTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PKLLEIVYEVLFECFPSVCVAVV*LTISLS
Trigger: GGAAAGAGAGATAGTCAGCCAGACCACAGCAACACA...CACGGAAGGAAAACATTCAAACAGGACCTCGTACACGATCTCCAACAATTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp GAATTTCTTCCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGTTTGCAGCTGGGATTATAGCTTaGCCTTTTCCAGTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: EFLPPFALPAADSIHLFAAGIIA*PFPVEL
Trigger: GAGCTCCACTGGAAAAGGCCAAGCTATAATCCCAGC...TGCAAACAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp GTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCCAAGAAGTGAAATGCTaGGATTATAGCTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: VDFATSLKPLVNCHFFHTQEVKC*DYSLAF
Trigger: AAAGGCCAAGCTATAATCCCAGCATTTCACTTCTTG...GGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp TTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCTTTGGCACCAAGGACTaGTTTCACAAAAGACAATAT +
Preference number: 4 (lower is better)
Translates to: FPGEDTPPLSLLVDFATSFGTKD*FHKRQY
Trigger: ATATTGTCTTTTGTGAAACCAGTCCTTGGTGCCAAA...GGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CAA 72 bp CCTCAAAATCCAGTAGGGTTTATTTGGGTCTTCTTGTaGAGGGTGAACAGTGGATATCTGAGGCTCAAAGCG +
Preference number: 4 (lower is better)
Translates to: PQNPVGFIWVFL*RVNSGYLRLKA
Trigger: CGCTTTGAGCCTCAGATATCCACTGTTCACCCTCAACAAGAAGACCCAAATAAACCCTACTGGATTTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp CGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTGTTTTGGAAGTTACTaGAGATTTTTGTCCCTCACT +
Preference number: 4 (lower is better)
Translates to: RYSWILPHPSSLWSIATSCFGSY*RFLSLT
Trigger: AGTGAGGGACAAAAATCTTCAGTAACTTCCAAAACA...AGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp GTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCTGTTTTGGAAGTTACTaGAGATTTTTGTCCCTCACT +
Preference number: 4 (lower is better)
Translates to: VDFATSLKPLVNCHFFHTCFGSY*RFLSLT
Trigger: AGTGAGGGACAAAAATCTTCAGTAACTTCCAAAACA...GGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp TTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGAATTCTTTGAGTTTGGTTCTTGAGCAGAAGAACCGATaGGACGCAGTTTCCATCGTG +
Preference number: 4 (lower is better)
Translates to: FVSSLCSLNLQNSLSLVLEQKNR*DAVSIV
Trigger: CACGATGGAAACTGCGTCTCATCGGTTCTTCTGCTC...AAGAACCAAACTCAAAGAATTCTGCAGGTTCAGAGAGCAAAGAGATGACACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp CCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATTCACTCTTCAAGAAGTaGAATGCTGGGATTATAGCT +
Preference number: 4 (lower is better)
Translates to: PPFALPAADSIHLFAAEDSLFKK*NAGIIA
Trigger: AGCTATAATCCCAGCATTTCACTTCTTGAAGAGTGA...ATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp TATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAACGTGTTCATCCCCAATaGCAAATGACACCATGCTGC +
Preference number: 4 (lower is better)
Translates to: YPGLHPLTSTALLGQCFERVHPQ*QMTPCC
Trigger: GCAGCATGGTGTCATTTGTCATTGGGGATGAACACG...TTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp CCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCTTTAGCATTTGTTGCTaGGGCTTTGCTTTTTGCATA +
Preference number: 4 (lower is better)
Translates to: PLSLLVDFATSLKPLVNCFSICC*GFAFCI
Trigger: TATGCAAAAAGCAAAGCCTCAGCAACAAATGCTAAA...GCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp ATTGTGTTCAGTGACCAACCTCAAAATCCAGTAGGGTTTATTTGGGTCTTCTTGAGGTGGTTTTGGTGGTaGTACCAGAGGACAAGACCT +
Preference number: 4 (lower is better)
Translates to: IVFSDQPQNPVGFIWVFLRWFWW*YQRTRP
Trigger: AGGTCTTGTCCTCTGGTAGCACCACCAAAACCACCT...CAAGAAGACCCAAATAAACCCTACTGGATTTTGAGGTTGGTCACTGAACACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp ACTGATGAATTTCTTCCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGCTGCAGCTTGATGAATaGATCTGGTTTGGATGTGCG +
Preference number: 4 (lower is better)
Translates to: TDEFLPPFALPAADSIHLLQLDE*IWFGCA
Trigger: CGCACATCCAAACCAGATGCATTCATCAAGCTGCAG...CAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTCATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp CGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTTGAATTTTAATTGCTaGTGCTACTTCCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RYSWILPHPSSLWSIATSLNFNC*CYFLSR
Trigger: TCTGCTGAGGAAGTAGCAGCAGCAATTAAAATTCAA...AGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp CTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGTCTGGAGTTGGGGACTaGAGATTTAGAGCATGTTCA +
Preference number: 4 (lower is better)
Translates to: LLLIQFICLQQRICICFPSGVGD*RFRACS
Trigger: TGAACATGCTCTAAATCTGCAGTCCCCAACTCCAGA...CGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp TCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAATGCACTTTCGCTACTCGTaGATTTTGCCACATCCCTCA +
Preference number: 4 (lower is better)
Translates to: SRTSSFNFNRSSWSMFRMHFRYS*ILPHPS
Trigger: TGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTG...CATTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp TCTGAACCTGCAGAATTCTTTGAGTTTGGTTCTTTTACGCCACGTGCAGCTGTTTTTGTTTGGAGGCCATaGCAGAAGCCGATCTATGTA +
Preference number: 4 (lower is better)
Translates to: SEPAEFFEFGSFTPRAAVFVWRP*QKPIYV
Trigger: TACATAGATCGGCTTCTGCCATGGCCTCCAAACAAA...AACAGCTGCACGTGGCGTAAAAGAACCAAACTCAAAGAATTCTGCAGGTTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp CCTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCCAGAACAAGACTGCCTaGTTTCAGGGATTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: PAADSIHLFAAEDLYLFSQNKTA*FQGFPR
Trigger: TCTTGGAAATCCCTGAAACCAGGCAGTCTTGTTCTG...GGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp CTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGATGTGCTTGCTAGACTaGGAGCTCAAACCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LLLIQFICLQQRICICFPMCLLD*ELKPFS
Trigger: TGAGAAAGGTTTGAGCTCCCAGTCTAGCAAGCACAT...CGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp CCAAAATTGTTGGAGATCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGCATCCCCATTCTTTTTaGCACCAAGGACTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: PKLLEIVYEVLFECFPSVHPHSF*HQGLVS
Trigger: TGAAACCAGTCCTTGGTGCCAAAAAGAATGGGGATG...CACGGAAGGAAAACATTCAAACAGGACCTCGTACACGATCTCCAACAATTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CAA 72 bp CATTTCATGTATGTTAATCGTGTCTCCTCTACCAGGTaGTCGTATCGTGAGAGCAGGGATATTCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: HFMYVNRVSSTR*SYRESRDIHGP
Trigger: AGGACCATGAATATCCCTGCTCTCACGATACGACAACCTGGTAGAGGAGACACGATTAACATACATGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CAA 72 bp AGCCATTCCACTAAAGAAACCTCTTCCAAGGAGGAATaGAGTAACTCCAAGTCCAAAACCATAGCCCGGAAT +
Preference number: 4 (lower is better)
Translates to: SHSTKETSSKEE*SNSKSKTIARN
Trigger: ATTCCGGGCTATGGTTTTGGACTTGGAGTTACTCAATTCCTCCTTGGAAGAGGTTTCTTTAGTGGAATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp CTTCATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTACTCTTCTTTCCCTGGTaGAGACACTCCTCCACTTTC +
Preference number: 4 (lower is better)
Translates to: LHLRSPAFPYTYPGLHPLLFFPW*RHSSTF
Trigger: GAAAGTGGAGGAGTGTCTTCACCAGGGAAAGAAGAG...TAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp CTTCATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAAGAGCTGGCCTCATCTaGCAGCTTAAACTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: LHLRSPAFPYTYPGLHPLRAGLI*QLKLRQ
Trigger: TTGCCTGAGTTTAAGCTGTCAGATGAGGCCAGCTCT...TAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp CCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATGAGGGTCTTGAACCATaGAGTGAGAATTTGAATTTT +
Preference number: 4 (lower is better)
Translates to: PPFALPAADSIHLFAAEDEGLEP*SENLNF
Trigger: AAAATTCAAATTCTCACTTCATGGTTCAAGACCCTC...ATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp CTTCATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAACGCAGTTTCCATCGTaGGGCTGCTACATATGTGTC +
Preference number: 4 (lower is better)
Translates to: LHLRSPAFPYTYPGLHPLTQFPS*GCYICV
Trigger: GACACATATGTAGCAGCCTCACGATGGAAACTGCGT...TAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp GAATTTCTTCCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGTTTGCACCTCTCCACATGGCTTaGATTTTAATTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: EFLPPFALPAADSIHLFAPLHMA*ILIAAA
Trigger: AGCAGCAGCAATTAAAATTCAAGCCATGTGGAGAGG...TGCAAACAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp CTCTTGCATCTGCTTTCTCCTTTGGAACTTTGTCGCTTTTCTCAGGAGCCTTTAACAGCCCAAACTTTTTaGAGAGTATCTGCAACACTG +
Preference number: 4 (lower is better)
Translates to: LLHLLSPLELCRFSQEPLTAQTF*RVSATL
Trigger: CAGTGTTGCAGATACTCTTCAAAAAGTTTGGGCTGT...TAAAGGCTCCTGAGAAAAGCGACAAAGTTCCAAAGGAGAAAGCAGATGCAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp CCAAAATTGTTGGAGATCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGACTGCAGTCATGGTGTaGAGACTAGTCTTGATTTCT +
Preference number: 4 (lower is better)
Translates to: PKLLEIVYEVLFECFPSVTAVMV*RLVLIS
Trigger: AGAAATCAAGACTAGTCTTCACACCATGACTGCAGT...CACGGAAGGAAAACATTCAAACAGGACCTCGTACACGATCTCCAACAATTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp CGGGCTTCATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCAACCCTACGGGATCATaGAATCTACGCTTTACTTAT +
Preference number: 4 (lower is better)
Translates to: RASSKESCISLYISRTSSNPTGS*NLRFTY
Trigger: ATAAGTAAAGCGTAGATTTCATGATCCCGTAGGGTT...GGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATGAAGCCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp CATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAACTTGTTTTCCTTCCGTGTaGTCTGCTCGCGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: HLRSPAFPYTYPGLHPLTCFPSV*SARALL
Trigger: AAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAACA...AGTTAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp CCTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGCCGAGTTGATACGATaGACCTCTTTCTTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: PAADSIHLFAAEDLYLFSAELIR*TSFFLV
Trigger: AACCAAAAAGAAAGAGGTGCATCGTATCAACTCGGC...GGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp GTGGACGTTTCCAGGAATAAATTTTCAAGGATGGTGGTAACTCAATCTTTCCTTGATTTATCCGATCCGTaGGCCGAGTTGATACGATGC +
Preference number: 4 (lower is better)
Translates to: VDVSRNKFSRMVVTQSFLDLSDP*AELIRC
Trigger: GCATCGTATCAACTCGGCGCACGGATCGGATAAATC...AAGGAAAGATTGAGTTACCACCATCCTTGAAAATTTATTCCTGGAAACGTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR GCA 90 bp ACTGATGAATTTCTTCCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGTCTTCAGAACAAGACTaGCTGGTTTCAGGGATTTCC +
Preference number: 4 (lower is better)
Translates to: TDEFLPPFALPAADSIHLSSEQD*LVSGIS
Trigger: GGAAATCCCTGAAACCAGGCAGTCTTGTTCTGAAGA...CAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTCATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp CTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGAACCATAGCCCGGAATaGAAATTTGAAGTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLLIQFICLQQRICICFPNHSPE*KFEVWR
Trigger: CCTCCAAACTTCAAATTTGCATTCCGGGCTATGGTT...CGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp ATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCGCACAATTTTAATTGCTGCTaGTACTTCCTCAGCAGAATA +
Preference number: 4 (lower is better)
Translates to: ILPHPSSLWSIATSSTPHNFNCC*YFLSRI
Trigger: TATTCTGCTGAGGAAGTAGCAGCAGCAATTAAAATT...GTGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp CGGGCTTCATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTCAACCGCTCTTCTTaGTCAATGTTTCGAATGCTA +
Preference number: 4 (lower is better)
Translates to: RASSKESCISLYISRTSSFNRSS*SMFRML
Trigger: TAGCATTCGAAACATTGACCAAGAAGAGCGGTTGAA...GGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATGAAGCCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp GAATTTCTTCCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGTTTGCAGAAGTCCAGGCTCTATaGGAGGACTGTCTTTTGTTA +
Preference number: 4 (lower is better)
Translates to: EFLPPFALPAADSIHLFAEVQAL*EDCLLL
Trigger: TAACAAAAGACAGTCCTCCCATAGAGCCTGGACTTC...TGCAAACAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp AAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAACTTCAACTGCTGCAGATGTGTATaGAGTGTCCTACTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: KESCISLYISRTSSFNFNCCRCV*SVLLGS
Trigger: ACTCCCCAGTAGGACACTCCATACACATCTGCAGCA...GTTGAAGTTAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp GTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCAGTAATTTGATTTGCTaGAGTATAAAGGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: VDFATSLKPLVNCHFFHTSNLIC*SIKGRC
Trigger: ACATCTCCCCTTTATACTCCAGCAAATCAAATTACT...GGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CAA 72 bp CCTATGCTGTCGAAACTGATGAATTTCTTCCGCCTTTaGCATTGCCTGCTGCTGATTCAATTCATCTGTTTG +
Preference number: 4 (lower is better)
Translates to: PMLSKLMNFFRL*HCLLLIQFICL
Trigger: CAAACAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTCATCAGTTTCGACAGCATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR CAA 72 bp TCTCTTTGCTCTCTGAACCTGCAGAATTCTTTGAGTTaGGTTCTTTTACGCCACGTGCAGCTGTTTCTACTT +
Preference number: 4 (lower is better)
Translates to: SLCSLNLQNSLS*VLLRHVQLFLL
Trigger: AAGTAGAAACAGCTGCACGTGGCGTAAAAGAACCAAACTCAAAGAATTCTGCAGGTTCAGAGAGCAAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp TTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGAATTCTTTGAGTTTGGTTCTTGTACGAGGTCCTGTTTaGATGTTTTCCTTCCGTGTG +
Preference number: 4 (lower is better)
Translates to: FVSSLCSLNLQNSLSLVLVRGPV*MFSFRV
Trigger: CACACGGAAGGAAAACATTCAAACAGGACCTCGTAC...AAGAACCAAACTCAAAGAATTCTGCAGGTTCAGAGAGCAAAGAGATGACACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp TCTGAACCTGCAGAATTCTTTGAGTTTGGTTCTTTTACGCCACGTGCAGCTGTTTCAAAATTCCTCCATTaGAGATCTTCCACACTGCAT +
Preference number: 4 (lower is better)
Translates to: SEPAEFFEFGSFTPRAAVSKFLH*RSSTLH
Trigger: ATGCAGTGTGGAAGATCTTCAATGGAGGAATTTTGA...AACAGCTGCACGTGGCGTAAAAGAACCAAACTCAAAGAATTCTGCAGGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp CTTCATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTATTGCTGTGGTCTGGCTaGCTATCTCTCTTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LHLRSPAFPYTYPGLHPLLLWSG*LSLFPS
Trigger: ACTTGGAAAGAGAGATAGTCAGCCAGACCACAGCAA...TAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp TCTGAACCTGCAGAATTCTTTGAGTTTGGTTCTTTTACGCCACGTGCAGCTGTTTCACTCTTCAAGAAGTaGAATGCTGGGATTATAGCT +
Preference number: 4 (lower is better)
Translates to: SEPAEFFEFGSFTPRAAVSLFKK*NAGIIA
Trigger: AGCTATAATCCCAGCATTTCACTTCTTGAAGAGTGA...AACAGCTGCACGTGGCGTAAAAGAACCAAACTCAAAGAATTCTGCAGGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp CTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGATCTCATCAGCTCGCTaGAGAGTAAATGTTCATTTG +
Preference number: 4 (lower is better)
Translates to: LLLIQFICLQQRICICFPISSAR*RVNVHL
Trigger: CAAATGAACATTTACTCTGCAGCGAGCTGATGAGAT...CGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp TCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAATGTTATGGCAAAGGAATTaGATGGAGAGTCTCGAGAGA +
Preference number: 4 (lower is better)
Translates to: SRTSSFNFNRSSWSMFRMLWQRN*MESLER
Trigger: TCTCTCGAGACTCTCCATGCAATTCCTTTGCCATAA...CATTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp CCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATAATTTTAATTGCTGCTaGTACTTCCTCAGCAGAATA +
Preference number: 4 (lower is better)
Translates to: PPFALPAADSIHLFAAEDNFNCC*YFLSRI
Trigger: TATTCTGCTGAGGAAGTAGCAGCAGCAATTAAAATT...ATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp CTCCCTGATCCTGTTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGAATTCTTTCTGTTTGTTCATCTGTaGCTGAGATGTAGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: LPDPVCVISLLSEPAEFFLFVHL*LRCSFC
Trigger: ACAAAAGCTACATCTCAGGCACAGATGAACAAACAG...AAAGAATTCTGCAGGTTCAGAGAGCAAAGAGATGACACAAACAGGATCAGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp ATCTCATCAGCTCGCTGCAGAGTAAATGTTCATTTGCTGAAAATAAGTCAAACGTCTTTTTGGTTTGTTTaGAGGCCATGGCAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: ISSARCRVNVHLLKISQTSFWFV*RPWQKP
Trigger: CGGCTTCTGCCATGGCCTCCAAACAAACCAAAAAGA...CGTTTGACTTATTTTCAGCAAATGAACATTTACTCTGCAGCGAGCTGATGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR CCA 90 bp TATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAACTTGATGAATGCATCTaGTTTGGATGTGCGTACCTG +
Preference number: 4 (lower is better)
Translates to: YPGLHPLTSTALLGQCFELDECI*FGCAYL
Trigger: CAGGTACGCACATCCAAACCAGATGCATTCATCAAG...TTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp CTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGAACATATATGGAGTGTCCTACTaGGGAGTATGCGTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LIQFICLQQRICICFPNIYGVSY*GVCVEE
Trigger: CTCTTCAACGCATACTCCCCAGTAGGACACTCCATA...TATGTTCGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp CTTCATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAAAATCGGCAGCTCTCTaGTTCAAAGTTGGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: LHLRSPAFPYTYPGLHPLKSAAL*FKVGQY
Trigger: GTACTGCCCAACTTTGAACCAGAGAGCTGCCGATTT...TAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp ACTGATGAATTTCTTCCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGATATTTCCATGGACTTaGTTTGGGGATGGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: TDEFLPPFALPAADSIHLIFPWT*FGDGFR
Trigger: CCTGAAACCATCCCCAAACCAAGTCCATGGAAATAT...CAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTCATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CAA 72 bp CTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGTTaGCAGCAGAGGATCTGTATCTGTTTTCCGAACATA +
Preference number: 4 (lower is better)
Translates to: LLHCLLLIQFIC*QQRICICFPNI
Trigger: TATGTTCGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAGGCAATGCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
3UTR CAA 72 bp CATAAGCAATCTAACGTAAGTTCCTCTCCACATGGCTaGAATTTTAATTGCTGCTGCTACTTCCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: HKQSNVSSSPHG*NFNCCCYFLSR
Trigger: TCTGCTGAGGAAGTAGCAGCAGCAATTAAAATTCAAGCCATGTGGAGAGGAACTTACGTTAGATTGCTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp CATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAACTCCTCTCCACATGGCTTaGATTTTAATTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: HLRSPAFPYTYPGLHPLTPLHMA*ILIAAA
Trigger: AGCAGCAGCAATTAAAATTCAAGCCATGTGGAGAGG...AGTTAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp CTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGTATAAAGGGGAGATGTaGGAAATGTCAGAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: LLLIQFICLQQRICICFPYKGEM*EMSEFQ
Trigger: TTGAAACTCTGACATTTCTCACATCTCCCCTTTATA...CGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp CTCCCTGATCCTGTTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGAATTCTTTTTCAATTCATCTGTTTaGAGCAGAGGATCTGTATCT +
Preference number: 4 (lower is better)
Translates to: LPDPVCVISLLSEPAEFFFNSSV*SRGSVS
Trigger: AGATACAGATCCTCTGCTGCAAACAGATGAATTGAA...AAAGAATTCTGCAGGTTCAGAGAGCAAAGAGATGACACAAACAGGATCAGGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp CTCTTGCATCTGCTTTCTCCTTTGGAACTTTGTCGCTTTTCTCAGGAGCCTTTATTCAATTCATCTGTTTaGAGCAGAGGATCTGTATCT +
Preference number: 4 (lower is better)
Translates to: LLHLLSPLELCRFSQEPLFNSSV*SRGSVS
Trigger: AGATACAGATCCTCTGCTGCAAACAGATGAATTGAA...TAAAGGCTCCTGAGAAAAGCGACAAAGTTCCAAAGGAGAAAGCAGATGCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp CTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGAACACCTTTGGCACTTaGTCCATTGTGTCATTATTA +
Preference number: 4 (lower is better)
Translates to: LLLIQFICLQQRICICFPNTFGT*SIVSLL
Trigger: TAATAATGACACAATGGAGCAAGTGCCAAAGGTGTT...CGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp TATACATATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTCAAATGACACCATGCTaGAGATGTGTATGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: YTYPGLHPLTSTALLGQCQMTPC*RCVWSV
Trigger: GACACTCCATACACATCTGCAGCATGGTGTCATTTG...ACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATATGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp CCTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCTTGAATTTTAATTGCTaGTGCTACTTCCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PAADSIHLFAAEDLYLFSLNFNC*CYFLSR
Trigger: TCTGCTGAGGAAGTAGCAGCAGCAATTAAAATTCAA...GGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp ACTGATGAATTTCTTCCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGACCAATGTCTTGTATTaGACTTACAGCTCTACCCTT +
Preference number: 4 (lower is better)
Translates to: TDEFLPPFALPAADSIHLTNVLY*TYSSTL
Trigger: AAGGGTAGAGCTGTAAGTGCAATACAAGACATTGGT...CAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTCATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp TTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGAATTCTTTGAGTTTGGTTCTTCCAGTAGGGTTTATTTaGGTCTTCTTGTTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: FVSSLCSLNLQNSLSLVLPVGFI*VFLLRV
Trigger: CACCCTCAACAAGAAGACCCAAATAAACCCTACTGG...AAGAACCAAACTCAAAGAATTCTGCAGGTTCAGAGAGCAAAGAGATGACACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp CTCCCTGATCCTGTTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGAATTCTTTTCTTTTGGTTTAGTTTaGCTTTCAGATATAGGCGGA +
Preference number: 4 (lower is better)
Translates to: LPDPVCVISLLSEPAEFFSFGLV*LSDIGG
Trigger: TCCGCCTATATCTGAAAGCCAAACTAAACCAAAAGA...AAAGAATTCTGCAGGTTCAGAGAGCAAAGAGATGACACAAACAGGATCAGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp ACTGATGAATTTCTTCCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGTTCAACCGCTCTTCTTaGTCAATGTTTCGAATGCTA +
Preference number: 4 (lower is better)
Translates to: TDEFLPPFALPAADSIHLFNRSS*SMFRML
Trigger: TAGCATTCGAAACATTGACCAAGAAGAGCGGTTGAA...CAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTCATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp TATACATATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTCAGAACAAGACTGCCTaGTTTCAGGGATTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: YTYPGLHPLTSTALLGQCQNKTA*FQGFPR
Trigger: TCTTGGAAATCCCTGAAACCAGGCAGTCTTGTTCTG...ACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATATGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp TATACATATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTACCTGCAGAATTCTTTaGGTTTGGTTCTTTTACGCC +
Preference number: 4 (lower is better)
Translates to: YTYPGLHPLTSTALLGQCTCRIL*VWFFYA
Trigger: GGCGTAAAAGAACCAAACTCAAAGAATTCTGCAGGT...ACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATATGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp TATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAAGTAGCTTTTGTTATTTaGCTCAAGTCTGTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: YPGLHPLTSTALLGQCFEVAFVI*LKSVWL
Trigger: TAGCCAGACAGACTTGAGTCAAATAACAAAAGCTAC...TTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp TATACATATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTCATGGACCTATGCCTTaGGAAATTGCTTTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: YTYPGLHPLTSTALLGQCHGPMP*EIALRN
Trigger: GTTTCTCAAAGCAATTTCTCAAGGCATAGGTCCATG...ACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATATGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp CTTCATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAGGCTCGGATTTCATCTaGCCTTTCTGTATCCTTTTT +
Preference number: 4 (lower is better)
Translates to: LHLRSPAFPYTYPGLHPLGSDFI*PFCILF
Trigger: AAAAAGGATACAGAAAGGGCAGATGAAATCCGAGCC...TAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp GTGGACGTTTCCAGGAATAAATTTTCAAGGATGGTGGTAACTCAATCTTTCCTTGCCGAGTTGATACGATaGACCTCTTTCTTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: VDVSRNKFSRMVVTQSFLAELIR*TSFFLV
Trigger: AACCAAAAAGAAAGAGGTGCATCGTATCAACTCGGC...AAGGAAAGATTGAGTTACCACCATCCTTGAAAATTTATTCCTGGAAACGTCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR GCA 90 bp GAATTTCTTCCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGTTTGCAAATGTCTCTTGCATCTaGTTTCTCCTTTGGAACTTT +
Preference number: 4 (lower is better)
Translates to: EFLPPFALPAADSIHLFANVSCI*FLLWNF
Trigger: AAAGTTCCAAAGGAGAAAGCAGATGCAAGAGACATT...TGCAAACAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp GAATTTCTTCCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGTTTGCAAAGGAGCGCACAAAATaGATTTCTGTTGGAATTGTA +
Preference number: 4 (lower is better)
Translates to: EFLPPFALPAADSIHLFAKERTK*ISVGIV
Trigger: TACAATTCCAACAGAAATGCATTTTGTGCGCTCCTT...TGCAAACAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp TATACATATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTAACCATAGCCCGGAATaGAAATTTGAAGTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: YTYPGLHPLTSTALLGQCNHSPE*KFEVWR
Trigger: CCTCCAAACTTCAAATTTGCATTCCGGGCTATGGTT...ACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATATGTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp TCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAATGCAGAGTAATTTGATTTaGTGGAGTATAAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SRTSSFNFNRSSWSMFRMQSNLI*WSIKGR
Trigger: TCTCCCCTTTATACTCCAGCAAATCAAATTACTCTG...CATTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp CATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAACTAATACCAAACTTCTCTaGAGTACATGCTGGAGTGAC +
Preference number: 4 (lower is better)
Translates to: HLRSPAFPYTYPGLHPLTNTKLL*STCWSD
Trigger: GTCACTCCAGCATGTACTGCAGAGAAGTTTGGTATT...AGTTAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CCA 90 bp CATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAACTTGTTTCCAAAATTGTTaGAGATCGTGTACGAGGTCC +
Preference number: 4 (lower is better)
Translates to: HLRSPAFPYTYPGLHPLTCFQNC*RSCTRS
Trigger: GGACCTCGTACACGATCTCCAACAATTTTGGAAACA...AGTTAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CCA 90 bp GCTCAAAATTCCTCCATTGAAGATCTTCCACACTGCATAGATTTCACTGATAATTTTGTTTGGAGGCCATaGCAGAAGCCGATCTATGTA +
Preference number: 4 (lower is better)
Translates to: AQNSSIEDLPHCIDFTDNFVWRP*QKPIYV
Trigger: TACATAGATCGGCTTCTGCCATGGCCTCCAAACAAA...ATTATCAGTGAAATCTATGCAGTGTGGAAGATCTTCAATGGAGGAATTTTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR CCA 90 bp CTTCATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTATCTCTGGTTCAAAGTTaGGCAGTACAACGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: LHLRSPAFPYTYPGLHPLSLVQS*AVQRVH
Trigger: ATGAACACGTTGTACTGCCCAACTTTGAACCAGAGA...TAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR TCA 90 bp ATCTCATCAGCTCGCTGCAGAGTAAATGTTCATTTGCTGAAAATAAGTCAAACGTCAAAATTCCTCCATTaGAGATCTTCCACACTGCAT +
Preference number: 4 (lower is better)
Translates to: ISSARCRVNVHLLKISQTSKFLH*RSSTLH
Trigger: ATGCAGTGTGGAAGATCTTCAATGGAGGAATTTTGA...CGTTTGACTTATTTTCAGCAAATGAACATTTACTCTGCAGCGAGCTGATGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR TCA 90 bp TATACATATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTAAAGATGAAAAACCCTaGAGTGCTGTGCAGTTAGTT +
Preference number: 4 (lower is better)
Translates to: YTYPGLHPLTSTALLGQCKDEKP*SAVQLV
Trigger: AACTAACTGCACAGCACTTCAGGGTTTTTCATCTTT...ACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATATGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR GCA 90 bp CTGATAATCCATCTCATCAGCTCGCTGCAGAGTAAATGTTCATTTGCTGAAAATATCTCATCAGCTCGCTaGAGAGTAAATGTTCATTTG +
Preference number: 4 (lower is better)
Translates to: LIIHLISSLQSKCSFAENISSAR*RVNVHL
Trigger: CAAATGAACATTTACTCTGCAGCGAGCTGATGAGAT...ATTTTCAGCAAATGAACATTTACTCTGCAGCGAGCTGATGAGATGGATTATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR GCA 90 bp AAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAACTTCAACTGTCTGGCTATGTGTTaGAGTTTCATCAGTTTCACT +
Preference number: 4 (lower is better)
Translates to: KESCISLYISRTSSFNFNCLAMC*SFISFT
Trigger: AGTGAAACTGATGAAACTGCAACACATAGCCAGACA...GTTGAAGTTAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
3UTR CAA 72 bp CTTCTTATTCTTGGTATAAAGATAAGGCACCACTTTTaGGAACACCTTTGGCACTTGCTCCATTGTGTCATT +
Preference number: 4 (lower is better)
Translates to: LLILGIKIRHHF*EHLWHLLHCVI
Trigger: AATGACACAATGGAGCAAGTGCCAAAGGTGTTCCAAAAAGTGGTGCCTTATCTTTATACCAAGAATAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR TCA 90 bp ATAATCCATCTCATCAGCTCGCTGCAGAGTAAATGTTCATTTGCTGAAAATAAGTGCATCCCACTTTTCTaGATTTATGTCAGCTTCACT +
Preference number: 4 (lower is better)
Translates to: IIHLISSLQSKCSFAENKCIPLF*IYVSFT
Trigger: AGTGAAGCTGACATAAATTCAGAAAAGTGGGATGCA...CTTATTTTCAGCAAATGAACATTTACTCTGCAGCGAGCTGATGAGATGGATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR TCA 90 bp CATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAACTATTCAAAAATGGACTTaGAATCTCAAGGAACCGTTC +
Preference number: 4 (lower is better)
Translates to: HLRSPAFPYTYPGLHPLTIQKWT*NLKEPF
Trigger: GAACGGTTCCTTGAGATTTCAAGTCCATTTTTGAAT...AGTTAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp TATACATATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTAACATACACTTCTTaGTCTTTCTTGGATGCAGAG +
Preference number: 4 (lower is better)
Translates to: YTYPGLHPLTSTALLGQCLTYTS*SFLDAE
Trigger: CTCTGCATCCAAGAAAGAGCAAGAAGTGTATGTTAA...ACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATATGTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp TTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGAATTCTTTGAGTTTGGTTCTTGAAGATCTTCCACACTaGATAGATTTCACTGATAAT +
Preference number: 4 (lower is better)
Translates to: FVSSLCSLNLQNSLSLVLEDLPH*IDFTDN
Trigger: ATTATCAGTGAAATCTATGCAGTGTGGAAGATCTTC...AAGAACCAAACTCAAAGAATTCTGCAGGTTCAGAGAGCAAAGAGATGACACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR GCA 90 bp CATCTCATCAGCTCGCTGCAGAGTAAATGTTCATTTGCTGAAAATAAGTCAAACGAAGATCTTCCACACTaGATAGATTTCACTGATAAT +
Preference number: 4 (lower is better)
Translates to: HLISSLQSKCSFAENKSNEDLPH*IDFTDN
Trigger: ATTATCAGTGAAATCTATGCAGTGTGGAAGATCTTC...GTTTGACTTATTTTCAGCAAATGAACATTTACTCTGCAGCGAGCTGATGAGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR CAA 90 bp GGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCGCTACTCGTGGATTTaGCCACATCCCTCAAGCCTT +
Preference number: 5 (lower is better)
Translates to: GEDTPPLSLLVDFATSLKRYSWI*PHPSSL
Trigger: AAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCG...CTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTGAAGACACTCAGGAGCTCCCAAACTTaGTCCATATATCCCGGGCAT +
Preference number: 5 (lower is better)
Translates to: CFPSVCSARALLSLVKTLRSSQT*SIYPGH
Trigger: ATGCCCGGGATATATGGACAAAGTTTGGGAGCTCCT...GAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp ATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCGCACCGCTACTCGTGGATTTaGCCACATCCCTCAAGCCTT +
Preference number: 5 (lower is better)
Translates to: ILPHPSSLWSIATSSTPHRYSWI*PHPSSL
Trigger: AAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCG...GTGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCTGCTGGGATTATAGCTaGGCCTTTTCCAGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: FPGEDTPPLSLLVDFATSCWDYS*AFSSGA
Trigger: AGCTCCACTGGAAAAGGCCAAGCTATAATCCCAGCA...GGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCGCTCGTTTGTGTCATCTCTTaGCTCTCTGAACCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: SCTRSCLNVFLPCALLALVCVIS*LSEPAE
Trigger: TTCTGCAGGTTCAGAGAGCAAAGAGATGACACAAAC...GAGCGCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCTTCTTTTTGGTTTGTTaGGAGGCCATGGCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: FPGEDTPPLSLLVDFATSFFLVC*EAMAEA
Trigger: GGCTTCTGCCATGGCCTCCAAACAAACCAAAAAGAA...GGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp CACCTTTGCCTGCATCCCACTTTTCTGAATTTATGTCAGCTTCACTCCACTCTGGATCCGTGCGCCGAGTaGATACGATGCACCTCTTTC +
Preference number: 5 (lower is better)
Translates to: HLCLHPTFLNLCQLHSTLDPCAE*IRCTSF
Trigger: GAAAGAGGTGCATCGTATCAACTCGGCGCACGGATC...CAGAGTGGAGTGAAGCTGACATAAATTCAGAAAAGTGGGATGCAGGCAAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR CAA 90 bp GTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCTGCTGGGATTATAGCTaGGCCTTTTCCAGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: VDFATSLKPLVNCHFFHTCWDYS*AFSSGA
Trigger: AGCTCCACTGGAAAAGGCCAAGCTATAATCCCAGCA...GGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS GCA 90 bp TTGGACTCTTTCGATTTATCCGATCCGTGCGCCGAGTTGATACGATaGACCTCTTTCTTTTTGGTTTGTTTGGAGGCCATGGCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: LDSFDLSDPCAELIR*TSFFLVCLEAMAEA
Trigger: GGCTTCTGCCATGGCCTCCAAACAAACCAAAAAGAAAGAGGTGCATCGTATCAACTCGGCGCACGGATCGGATAAATCGAAAGAGTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR CAA 90 bp GGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGTGTACGAGGTCCTGTTaGAATGTTTTCCTTCCGTGT +
Preference number: 5 (lower is better)
Translates to: GEDTPPLSLLVDFATSLKCTRSC*NVFLPC
Trigger: ACACGGAAGGAAAACATTCAAACAGGACCTCGTACA...CTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp AATTGCCACTTCTTCCACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTTGTGGGAGGACTGTCTTTaGTTAAGGCTCCATACTCCC +
Preference number: 5 (lower is better)
Translates to: NCHFFHTALPDPVCVISLWEDCL*LRLHTP
Trigger: GGGAGTATGGAGCCTTAACAAAAGACAGTCCTCCCA...CAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TGGTGCTACCAGAGGACAAGACCTACTTCTAGTCACCAGCACAGGATGGCTACACTTTTTGGAACACCTTaGGCACTTGCTCCATTGTGT +
Preference number: 5 (lower is better)
Translates to: WCYQRTRPTSSHQHRMATLFGTP*ALAPLC
Trigger: ACACAATGGAGCAAGTGCCAAAGGTGTTCCAAAAAG...TGTAGCCATCCTGTGCTGGTGACTAGAAGTAGGTCTTGTCCTCTGGTAGCACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp TTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTACTGGGGAGTATGCGTaGAAGAGTAGCATGTGTCTC +
Preference number: 5 (lower is better)
Translates to: FRYSWILPHPSSLWSIATTGEYA*KSSMCL
Trigger: GAGACACATGCTACTCTTCAACGCATACTCCCCAGT...AGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp CCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCTCTCTGGTTCAAAGTaGGGCAGTACAACGTGTTCA +
Preference number: 5 (lower is better)
Translates to: PLSLLVDFATSLKPLVNCLSGSK*GSTTCS
Trigger: TGAACACGTTGTACTGCCCAACTTTGAACCAGAGAG...GCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCGCACTCCCTGATCCTTCTTCCAAGGAGGAATaGAGTAACTCCAAGTCCAAA +
Preference number: 5 (lower is better)
Translates to: SLKPLVNCHFFHTALPDPSSKEE*SNSKSK
Trigger: TTTGGACTTGGAGTTACTCAATTCCTCCTTGGAAGA...AGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp AATTGCCACTTCTTCCACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTTGCCATCCCCATTCTTTTaGGCACCAAGGACTGGTTTC +
Preference number: 5 (lower is better)
Translates to: NCHFFHTALPDPVCVISLPSPFF*APRTGF
Trigger: GAAACCAGTCCTTGGTGCCAAAAAGAATGGGGATGG...CAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp CTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGGTCTCCTCTACCAGGTaGTCGTATCGTGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: LLLIQFICLQQRICICFPVSSTR*SYRESR
Trigger: CCTGCTCTCACGATACGACAACCTGGTAGAGGAGAC...CGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp GGTTTTGGTGGTGCTACCAGAGGACAAGACCTACTTCTAGTCACCAGCACAGGACAGAATTCTTTGAGTTaGGTTCTTTTACGCCACGTG +
Preference number: 5 (lower is better)
Translates to: GFGGATRGQDLLLVTSTGQNSLS*VLLRHV
Trigger: CACGTGGCGTAAAAGAACCAAACTCAAAGAATTCTG...TCCTGTGCTGGTGACTAGAAGTAGGTCTTGTCCTCTGGTAGCACCACCAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp TGGTGCTACCAGAGGACAAGACCTACTTCTAGTCACCAGCACAGGATGGCTACAATGTTTCCAAAATTGTaGGAGATCGTGTACGAGGTC +
Preference number: 5 (lower is better)
Translates to: WCYQRTRPTSSHQHRMATMFPKL*EIVYEV
Trigger: GACCTCGTACACGATCTCCAACAATTTTGGAAACAT...TGTAGCCATCCTGTGCTGGTGACTAGAAGTAGGTCTTGTCCTCTGGTAGCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp CCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTTCCGCCTTTTGCATaGCCTGCTGCTGATTCAATT +
Preference number: 5 (lower is better)
Translates to: PPFALPAADSIHLFAAEDLPPFA*PAADSI
Trigger: AATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAG...ATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp ATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCGCACCTCTTTCTTTTTGGTTaGTTTGGAGGCCATGGCAGA +
Preference number: 5 (lower is better)
Translates to: ILPHPSSLWSIATSSTPHLFLFG*FGGHGR
Trigger: TCTGCCATGGCCTCCAAACAAACCAAAAAGAAAGAG...GTGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp TCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCGCACTCCCTGATCCTGAATTTCCCCTTCTTTaGTTCAGTAGAACCAGATTG +
Preference number: 5 (lower is better)
Translates to: SLKPLVNCHFFHTALPDPEFPLL*FSRTRL
Trigger: CAATCTGGTTCTACTGAACAAAAGAAGGGGAAATTC...AGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp TGGTGCTACCAGAGGACAAGACCTACTTCTAGTCACCAGCACAGGATGGCTACAGAACACCTTTGGCACTaGCTCCATTGTGTCATTATT +
Preference number: 5 (lower is better)
Translates to: WCYQRTRPTSSHQHRMATEHLWH*LHCVII
Trigger: AATAATGACACAATGGAGCAAGTGCCAAAGGTGTTC...TGTAGCCATCCTGTGCTGGTGACTAGAAGTAGGTCTTGTCCTCTGGTAGCACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp CACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCTTTATGGCAAAGGAATaGCATGGAGAGTCTCGAGAG +
Preference number: 5 (lower is better)
Translates to: HFRYSWILPHPSSLWSIAFMAKE*HGESRE
Trigger: CTCTCGAGACTCTCCATGCAATTCCTTTGCCATAAA...GGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp GAGATCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTGCTCTGCTCGCATGAATGCATCTGGTTaGGATGTGCGTACCTGTATT +
Preference number: 5 (lower is better)
Translates to: EIVYEVLFECFPSVCSARMNASG*DVRTCI
Trigger: AATACAGGTACGCACATCCAAACCAGATGCATTCAT...GCGAGCAGAGCACACGGAAGGAAAACATTCAAACAGGACCTCGTACACGATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCATGAATGCATCTGGTTaGGATGTGCGTACCTGTATT +
Preference number: 5 (lower is better)
Translates to: FPGEDTPPLSLLVDFATSMNASG*DVRTCI
Trigger: AATACAGGTACGCACATCCAAACCAGATGCATTCAT...GGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp AATTGCCACTTCTTCCACACCGCACTCCCTGATCCTGTTTGTGTCATCTCTTTGTCTAGGACCTGCAGCTaGATGAATGCATCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: NCHFFHTALPDPVCVISLSRTCS*MNASGL
Trigger: CAAACCAGATGCATTCATCAAGCTGCAGGTCCTAGA...CAAAGAGATGACACAAACAGGATCAGGGAGTGCGGTGTGGAAGAAGTGGCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp CACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCGCCCGGAATGCAAATTaGAAGTTTGGAGGAGGTTTT +
Preference number: 5 (lower is better)
Translates to: HFRYSWILPHPSSLWSIAARNAN*KFGGGF
Trigger: AAAACCTCCTCCAAACTTCAAATTTGCATTCCGGGC...GGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCTCTTCCAAGGAGGAATaGAGTAACTCCAAGTCCAAA +
Preference number: 5 (lower is better)
Translates to: FPGEDTPPLSLLVDFATSSSKEE*SNSKSK
Trigger: TTTGGACTTGGAGTTACTCAATTCCTCCTTGGAAGA...GGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTGAAGACACTCCTCTTAACATACACTTCTaGCTCTTTCTTGGATGCAGA +
Preference number: 5 (lower is better)
Translates to: FSFRVLCSRSSFPGEDTPLNIHF*LFLGCR
Trigger: TCTGCATCCAAGAAAGAGCAAGAAGTGTATGTTAAG...AGGAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp CTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGTCCATGGCTCTGGAGTaGGGGACTGCAGATTTAGAG +
Preference number: 5 (lower is better)
Translates to: LLLIQFICLQQRICICFPSMALE*GTADLE
Trigger: CTCTAAATCTGCAGTCCCCAACTCCAGAGCCATGGA...CGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp TTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCAATATTTCCATGGACTaGGTTTGGGGATGGTTTCAG +
Preference number: 5 (lower is better)
Translates to: FPGEDTPPLSLLVDFATSNISMD*VWGWFQ
Trigger: CTGAAACCATCCCCAAACCAAGTCCATGGAAATATT...GGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS GCA 90 bp ACATTATCTTTCGATTTATCCGATCCGTGCGCCGAGTTGATACGATaGACCTCTTTCTTTTTGGTTTGTTTGGAGGCCATGGCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: TLSFDLSDPCAELIR*TSFFLVCLEAMAEA
Trigger: GGCTTCTGCCATGGCCTCCAAACAAACCAAAAAGAAAGAGGTGCATCGTATCAACTCGGCGCACGGATCGGATAAATCGAAAGATAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522242.5
CDS-3UTR CAA 90 bp GGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCTTTGCCTTTCCTTGTaGTTTTGGAAGTTACTGAAG +
Preference number: 5 (lower is better)
Translates to: GEDTPPLSLLVDFATSLKLCLSL*FWKLLK
Trigger: CTTCAGTAACTTCCAAAACAACAAGGAAAGGCAAAG...CTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp GTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCCAGAATTCTTTGAGTTaGGTTCTTTTACGCCACGTG +
Preference number: 5 (lower is better)
Translates to: VDFATSLKPLVNCHFFHTQNSLS*VLLRHV
Trigger: CACGTGGCGTAAAAGAACCAAACTCAAAGAATTCTG...GGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp CACCTTTGCCTGCATCCCACTTTTCTGAATTTATGTCAGCTTCACTCCACTCTGTTCTTTTTGGTTTGTTaGGAGGCCATGGCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: HLCLHPTFLNLCQLHSTLFFLVC*EAMAEA
Trigger: GGCTTCTGCCATGGCCTCCAAACAAACCAAAAAGAA...CAGAGTGGAGTGAAGCTGACATAAATTCAGAAAAGTGGGATGCAGGCAAAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR CAA 90 bp GGTCTTCTTGTTGAGGGTGAACAGTGGATATCTGAGGCTCAAAGCGAGGTGCTTTCTTTCCAATGTCTCTaGCATCTGCTTTCTCCTTTG +
Preference number: 5 (lower is better)
Translates to: GLLVEGEQWISEAQSEVLSFQCL*HLLSPL
Trigger: CAAAGGAGAAAGCAGATGCAAGAGACATTGGAAAGA...AAGCACCTCGCTTTGAGCCTCAGATATCCACTGTTCACCCTCAACAAGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp GTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCCTTCTGATGAGGGTCTaGAACCATGAAGTGAGAATT +
Preference number: 5 (lower is better)
Translates to: VDFATSLKPLVNCHFFHTLLMRV*NHEVRI
Trigger: AATTCTCACTTCATGGTTCAAGACCCTCATCAGAAG...GGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp TTTTCCTTCCGTGTGCTCTGCTCGCGCTCTTCTTTCCCTGGTGAAGACACTCCTGCTCAAGCAGTATTGTaGACTAAATATATTCCCAGA +
Preference number: 5 (lower is better)
Translates to: FSFRVLCSRSSFPGEDTPAQAVL*TKYIPR
Trigger: TCTGGGAATATATTTAGTCAACAATACTGCTTGAGC...AGGAGTGTCTTCACCAGGGAAAGAAGAGCGCGAGCAGAGCACACGGAAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp GGTTTTGGTGGTGCTACCAGAGGACAAGACCTACTTCTAGTCACCAGCACAGGATTTCTTTGCCTTTCCTaGTTGTTTTGGAAGTTACTG +
Preference number: 5 (lower is better)
Translates to: GFGGATRGQDLLLVTSTGFLCLS*LFWKLL
Trigger: CAGTAACTTCCAAAACAACAAGGAAAGGCAAAGAAA...TCCTGTGCTGGTGACTAGAAGTAGGTCTTGTCCTCTGGTAGCACCACCAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp TTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATCCTCAGAAGACTTTTCTTaGCCTTTCCTTGTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: FPGEDTPPLSLLVDFATSSEDFS*PFLVVL
Trigger: CAAAACAACAAGGAAAGGCAAAGAAAAGTCTTCTGA...GGATGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp CCGCTCTTCTTGGTCAATGTTTCGAATGCTAAGGACTCTGGTCCTATGCTGTCGAACCTGCAGAATTCTTaGAGTTTGGTTCTTTTACGC +
Preference number: 5 (lower is better)
Translates to: PLFLVNVSNAKDSGPMLSNLQNS*SLVLLR
Trigger: GCGTAAAAGAACCAAACTCAAAGAATTCTGCAGGTT...CGACAGCATAGGACCAGAGTCCTTAGCATTCGAAACATTGACCAAGAAGAGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp ATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCGCACATTCAATTCATCTGTTaGCAGCAGAGGATCTGTATC +
Preference number: 5 (lower is better)
Translates to: ILPHPSSLWSIATSSTPHIQFIC*QQRICI
Trigger: GATACAGATCCTCTGCTGCAAACAGATGAATTGAAT...GTGCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp CACTTTCGCTACTCGTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCATTCAATTCATCTGTTaGCAGCAGAGGATCTGTATC +
Preference number: 5 (lower is better)
Translates to: HFRYSWILPHPSSLWSIAIQFIC*QQRICI
Trigger: GATACAGATCCTCTGCTGCAAACAGATGAATTGAAT...GGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCACGAGTAGCGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp CGGGCTTCATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCAATTTCTTCCGCCTTTaGCATTGCCTGCTGCTGATT +
Preference number: 5 (lower is better)
Translates to: RASSKESCISLYISRTSSNFFRL*HCLLLI
Trigger: AATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATT...GGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATGAAGCCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp CTTCATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAGATCCGTGCGCCGAGTaGATACGATGCACCTCTTTC +
Preference number: 5 (lower is better)
Translates to: LHLRSPAFPYTYPGLHPLDPCAE*IRCTSF
Trigger: GAAAGAGGTGCATCGTATCAACTCGGCGCACGGATC...TAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp CTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGTTCTCCTTTGGAACTTaGTCGCTTTTCTCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: LLLIQFICLQQRICICFPFSFGT*SLFSGA
Trigger: GGCTCCTGAGAAAAGCGACAAAGTTCCAAAGGAGAA...CGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp GTGGATTTTGCCACATCCCTCAAGCCTTTGGTCAATTGCCACTTCTTCCACACCTGTAGCTTTTGTTATTaGACTCAAGTCTGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: VDFATSLKPLVNCHFFHTCSFCY*TQVCLA
Trigger: AGCCAGACAGACTTGAGTCAAATAACAAAAGCTACA...GGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTGAGGGATGTGGCAAAATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp CCAAAATTGTTGGAGATCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGCTCTCTGGTTCAAAGTaGGGCAGTACAACGTGTTCA +
Preference number: 5 (lower is better)
Translates to: PKLLEIVYEVLFECFPSVLSGSK*GSTTCS
Trigger: TGAACACGTTGTACTGCCCAACTTTGAACCAGAGAG...CACGGAAGGAAAACATTCAAACAGGACCTCGTACACGATCTCCAACAATTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS GCA 90 bp ATAAGACTGGGAGCTCAAACCTTTCTCACTCTTCAAGAAGTGAAATaGTGGGATTATAGCTTGGCCTTTTCCAGTGGAGCTCACCATAGT +
Preference number: 5 (lower is better)
Translates to: IRLGAQTFLTLQEVK*WDYSLAFSSGAHHS
Trigger: ACTATGGTGAGCTCCACTGGAAAAGGCCAAGCTATAATCCCAGCATTTCACTTCTTGAAGAGTGAGAAAGGTTTGAGCTCCCAGTCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367490.5
ENST00000480328.6
CDS-3UTR CAA 90 bp TGTTCCGTAAATCGGCAGCTCTCTGGTTCAAAGTTGGGCAGTACAACGTGTTCACTTTGCCTTTCCTTGTaGTTTTGGAAGTTACTGAAG +
Preference number: 5 (lower is better)
Translates to: CSVNRQLSGSKLGSTTCSLCLSL*FWKLLK
Trigger: CTTCAGTAACTTCCAAAACAACAAGGAAAGGCAAAG...TGAACACGTTGTACTGCCCAACTTTGAACCAGAGAGCTGCCGATTTACGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp TCTTTCCCTGGTGAAGACACTCCTCCACTTTCGCTACTCGTGGATTTTGCCACATTTCTTTGCCTTTCCTaGTTGTTTTGGAAGTTACTG +
Preference number: 5 (lower is better)
Translates to: SFPGEDTPPLSLLVDFATFLCLS*LFWKLL
Trigger: CAGTAACTTCCAAAACAACAAGGAAAGGCAAAGAAA...TGTGGCAAAATCCACGAGTAGCGAAAGTGGAGGAGTGTCTTCACCAGGGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TCTGAACCTGCAGAATTCTTTGAGTTTGGTTCTTTTACGCCACGTGCAGCTGTTCTCAAAGCGAGGTGCTaGTTTTTCTTTGGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: SEPAEFFEFGSFTPRAAVLKARC*FFFGCL
Trigger: AAGACAGCCAAAGAAAAACAAGCACCTCGCTTTGAG...AACAGCTGCACGTGGCGTAAAAGAACCAAACTCAAAGAATTCTGCAGGTTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TATACATATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTCAAGCCTTTGGTCAATaGCCACTTCTTCCACACCGC +
Preference number: 5 (lower is better)
Translates to: YTYPGLHPLTSTALLGQCQAFGQ*PLLPHR
Trigger: GCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTG...ACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATATGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGAATTCTTTGAGTTTGGTTCTTCAAGCCTTTGGTCAATaGCCACTTCTTCCACACCGC +
Preference number: 5 (lower is better)
Translates to: FVSSLCSLNLQNSLSLVLQAFGQ*PLLPHR
Trigger: GCGGTGTGGAAGAAGTGGCAATTGACCAAAGGCTTG...AAGAACCAAACTCAAAGAATTCTGCAGGTTCAGAGAGCAAAGAGATGACACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp GAATTTCTTCCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGTTTGCACTTCCGCCTTTTGCATaGCCTGCTGCTGATTCAATT +
Preference number: 5 (lower is better)
Translates to: EFLPPFALPAADSIHLFALPPFA*PAADSI
Trigger: AATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAG...TGCAAACAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp CCAAAATTGTTGGAGATCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGCTTCAACCGCTCTTCTaGGTCAATGTTTCGAATGCT +
Preference number: 5 (lower is better)
Translates to: PKLLEIVYEVLFECFPSVLQPLF*VNVSNA
Trigger: AGCATTCGAAACATTGACCAAGAAGAGCGGTTGAAG...CACGGAAGGAAAACATTCAAACAGGACCTCGTACACGATCTCCAACAATTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp CTCCCTGATCCTGTTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGAATTCTTTCTTCAACCGCTCTTCTaGGTCAATGTTTCGAATGCT +
Preference number: 5 (lower is better)
Translates to: LPDPVCVISLLSEPAEFFLQPLF*VNVSNA
Trigger: AGCATTCGAAACATTGACCAAGAAGAGCGGTTGAAG...AAAGAATTCTGCAGGTTCAGAGAGCAAAGAGATGACACAAACAGGATCAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp CTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGCTTTTTGGAACACCTTaGGCACTTGCTCCATTGTGT +
Preference number: 5 (lower is better)
Translates to: LLLIQFICLQQRICICFPLFGTP*ALAPLC
Trigger: ACACAATGGAGCAAGTGCCAAAGGTGTTCCAAAAAG...CGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TCTGAACCTGCAGAATTCTTTGAGTTTGGTTCTTTTACGCCACGTGCAGCTGTTATAAGGCACCACTTTTaGGAACACCTTTGGCACTTG +
Preference number: 5 (lower is better)
Translates to: SEPAEFFEFGSFTPRAAVIRHHF*EHLWHL
Trigger: CAAGTGCCAAAGGTGTTCCAAAAAGTGGTGCCTTAT...AACAGCTGCACGTGGCGTAAAAGAACCAAACTCAAAGAATTCTGCAGGTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp CTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGGCCCGGAATGCAAATTaGAAGTTTGGAGGAGGTTTT +
Preference number: 5 (lower is better)
Translates to: LLLIQFICLQQRICICFPARNAN*KFGGGF
Trigger: AAAACCTCCTCCAAACTTCAAATTTGCATTCCGGGC...CGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS TCA 90 bp TCCCGGGCATCCAGTAAAGTTTCACAACATACTTTCCATAGCTATTaGACAAAGGCATATGACCCTTCACAGCCTTGCACAGAGAGTATA +
Preference number: 5 (lower is better)
Translates to: SRASSKVSQHTFHSY*TKAYDPSQPCTESI
Trigger: TATACTCTCTGTGCAAGGCTGTGAAGGGTCATATGCCTTTGTTCAATAGCTATGGAAAGTATGTTGTGAAACTTTACTGGATGCCCGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp CCAAAATTGTTGGAGATCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTTTATTTGGGTCTTCTaGTTGAGGGTGAACAGTGGA +
Preference number: 5 (lower is better)
Translates to: PKLLEIVYEVLFECFPSVFIWVF*LRVNSG
Trigger: TCCACTGTTCACCCTCAACAAGAAGACCCAAATAAA...CACGGAAGGAAAACATTCAAACAGGACCTCGTACACGATCTCCAACAATTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TATACATATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTAGTTGTCTCCCAGGCTaGTTTCATGGCTCGGATTTC +
Preference number: 5 (lower is better)
Translates to: YTYPGLHPLTSTALLGQCSCLPG*FHGSDF
Trigger: GAAATCCGAGCCATGAAACAAGCCTGGGAGACAACT...ACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATATGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp GAATTTCTTCCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGTTTGCAGTTTGTGTCATCTCTTaGCTCTCTGAACCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: EFLPPFALPAADSIHLFAVCVIS*LSEPAE
Trigger: TTCTGCAGGTTCAGAGAGCAAAGAGATGACACAAAC...TGCAAACAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp CTCCCTGATCCTGTTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGAATTCTTTATGTTTCCAAAATTGTaGGAGATCGTGTACGAGGTC +
Preference number: 5 (lower is better)
Translates to: LPDPVCVISLLSEPAEFFMFPKL*EIVYEV
Trigger: GACCTCGTACACGATCTCCAACAATTTTGGAAACAT...AAAGAATTCTGCAGGTTCAGAGAGCAAAGAGATGACACAAACAGGATCAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp ACTGATGAATTTCTTCCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGAATTTCTTCCGCCTTTaGCATTGCCTGCTGCTGATT +
Preference number: 5 (lower is better)
Translates to: TDEFLPPFALPAADSIHLNFFRL*HCLLLI
Trigger: AATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATT...CAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTCATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAATGCTGTCTGGCTATGTGTaGCAGTTTCATCAGTTTCAC +
Preference number: 5 (lower is better)
Translates to: SRTSSFNFNRSSWSMFRMLSGYV*QFHQFH
Trigger: GTGAAACTGATGAAACTGCAACACATAGCCAGACAG...CATTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp AAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAACTTCAACTGGGAGGACTGTCTTTaGTTAAGGCTCCATACTCCC +
Preference number: 5 (lower is better)
Translates to: KESCISLYISRTSSFNFNWEDCL*LRLHTP
Trigger: GGGAGTATGGAGCCTTAACAAAAGACAGTCCTCCCA...GTTGAAGTTAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp CCTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGAACACCTTTGGCACTaGCTCCATTGTGTCATTATT +
Preference number: 5 (lower is better)
Translates to: PAADSIHLFAAEDLYLFSEHLWH*LHCVII
Trigger: AATAATGACACAATGGAGCAAGTGCCAAAGGTGTTC...GGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAATGATAAGGCACCACTTTTaGGAACACCTTTGGCACTTG +
Preference number: 5 (lower is better)
Translates to: SRTSSFNFNRSSWSMFRMIRHHF*EHLWHL
Trigger: CAAGTGCCAAAGGTGTTCCAAAAAGTGGTGCCTTAT...CATTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGAATTCTTTGAGTTTGGTTCTTACTGGGGAGTATGCGTaGAAGAGTAGCATGTGTCTC +
Preference number: 5 (lower is better)
Translates to: FVSSLCSLNLQNSLSLVLTGEYA*KSSMCL
Trigger: GAGACACATGCTACTCTTCAACGCATACTCCCCAGT...AAGAACCAAACTCAAAGAATTCTGCAGGTTCAGAGAGCAAAGAGATGACACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp ATTGTGTTCAGTGACCAACCTCAAAATCCAGTAGGGTTTATTTGGGTCTTCTTGCTCAAAGCGAGGTGCTaGTTTTTCTTTGGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: IVFSDQPQNPVGFIWVFLLKARC*FFFGCL
Trigger: AAGACAGCCAAAGAAAAACAAGCACCTCGCTTTGAG...CAAGAAGACCCAAATAAACCCTACTGGATTTTGAGGTTGGTCACTGAACACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp CTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGAACCTGCAGAATTCTTaGAGTTTGGTTCTTTTACGC +
Preference number: 5 (lower is better)
Translates to: LLLIQFICLQQRICICFPNLQNS*SLVLLR
Trigger: GCGTAAAAGAACCAAACTCAAAGAATTCTGCAGGTT...CGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAATGCACCTCTTTCTTTTaGGTTTGTTTGGAGGCCATG +
Preference number: 5 (lower is better)
Translates to: YPGLHPLTSTALLGQCFECTSFF*VCLEAM
Trigger: CATGGCCTCCAAACAAACCAAAAAGAAAGAGGTGCA...TTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp ACTGATGAATTTCTTCCGCCTTTTGCATTGCCTGCTGCTGATTCAATTCATCTGCTCAAAATTCCTCCATaGAAGATCTTCCACACTGCA +
Preference number: 5 (lower is better)
Translates to: TDEFLPPFALPAADSIHLLKIPP*KIFHTA
Trigger: TGCAGTGTGGAAGATCTTCAATGGAGGAATTTTGAG...CAGATGAATTGAATCAGCAGCAGGCAATGCAAAAGGCGGAAGAAATTCATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp TATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAATTTATGGCAAAGGAATaGCATGGAGAGTCTCGAGAG +
Preference number: 5 (lower is better)
Translates to: YPGLHPLTSTALLGQCFEFMAKE*HGESRE
Trigger: CTCTCGAGACTCTCCATGCAATTCCTTTGCCATAAA...TTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp AAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAACTTCAACTCTAGGACCTGCAGCTaGATGAATGCATCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: KESCISLYISRTSSFNFNSRTCS*MNASGL
Trigger: CAAACCAGATGCATTCATCAAGCTGCAGGTCCTAGA...GTTGAAGTTAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TCTGAACCTGCAGAATTCTTTGAGTTTGGTTCTTTTACGCCACGTGCAGCTGTTTCATGGACCTATGCCTaGAGAAATTGCTTTGAGAAA +
Preference number: 5 (lower is better)
Translates to: SEPAEFFEFGSFTPRAAVSWTYA*RNCFEK
Trigger: TTTCTCAAAGCAATTTCTCAAGGCATAGGTCCATGA...AACAGCTGCACGTGGCGTAAAAGAACCAAACTCAAAGAATTCTGCAGGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp CCTGCTGCTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCATTCCTTGTCCTTGGTaGTCTCAAATGAATAAGCAC +
Preference number: 5 (lower is better)
Translates to: PAADSIHLFAAEDLYLFSIPCPW*SQMNKH
Trigger: GTGCTTATTCATTTGAGACAACCAAGGACAAGGAAT...GGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAGCAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS TCA 90 bp AGCAACCCATCCAGTAAAGTTTCACAACATACTTTCCATAGCTATTaGACAAAGGCATATGACCCTTCACAGCCTTGCACAGAGAGTATA +
Preference number: 5 (lower is better)
Translates to: SNPSSKVSQHTFHSY*TKAYDPSQPCTESI
Trigger: TATACTCTCTGTGCAAGGCTGTGAAGGGTCATATGCCTTTGTTCAATAGCTATGGAAAGTATGTTGTGAAACTTTACTGGATGGGTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326929.8
ENST00000397944.8
ENST00000681847.1
CDS-3UTR CAA 90 bp CATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAACTTGTACGAGGTCCTGTTaGAATGTTTTCCTTCCGTGT +
Preference number: 5 (lower is better)
Translates to: HLRSPAFPYTYPGLHPLTCTRSC*NVFLPC
Trigger: ACACGGAAGGAAAACATTCAAACAGGACCTCGTACA...AGTTAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp TTTCATAATCAACAGAGACTGTTCCGTAAATCGGCAGCTCTCTGGTTCAAAGTTGAGATGTTTCCAAAATaGTTGGAGATCGTGTACGAG +
Preference number: 5 (lower is better)
Translates to: FHNQQRLFRKSAALWFKVEMFPK*LEIVYE
Trigger: CTCGTACACGATCTCCAACAATTTTGGAAACATCTC...AACTTTGAACCAGAGAGCTGCCGATTTACGGAACAGTCTCTGTTGATTATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp GTGGACGTTTCCAGGAATAAATTTTCAAGGATGGTGGTAACTCAATCTTTCCTTCTCTTTCTTTTTGGTTaGTTTGGAGGCCATGGCAGA +
Preference number: 5 (lower is better)
Translates to: VDVSRNKFSRMVVTQSFLLFLFG*FGGHGR
Trigger: TCTGCCATGGCCTCCAAACAAACCAAAAAGAAAGAG...AAGGAAAGATTGAGTTACCACCATCCTTGAAAATTTATTCCTGGAAACGTCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR CAA 90 bp CCAAAATTGTTGGAGATCGTGTACGAGGTCCTGTTTGAATGTTTTCCTTCCGTGTATGAGAGGTCTGTATaGCAGAAGAACAATCTGATA +
Preference number: 5 (lower is better)
Translates to: PKLLEIVYEVLFECFPSVYERSV*QKNNLI
Trigger: TATCAGATTGTTCTTCTGCAATACAGACCTCTCATA...CACGGAAGGAAAACATTCAAACAGGACCTCGTACACGATCTCCAACAATTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp CTCCCTGATCCTGTTTGTGTCATCTCTTTGCTCTCTGAACCTGCAGAATTCTTTCAAGCTCAAGCAGTATaGTTGACTAAATATATTCCC +
Preference number: 5 (lower is better)
Translates to: LPDPVCVISLLSEPAEFFQAQAV*LTKYIP
Trigger: GGGAATATATTTAGTCAACAATACTGCTTGAGCTTG...AAAGAATTCTGCAGGTTCAGAGAGCAAAGAGATGACACAAACAGGATCAGGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp TATACATATCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTTATTTGGGTCTTCTaGTTGAGGGTGAACAGTGGA +
Preference number: 5 (lower is better)
Translates to: YTYPGLHPLTSTALLGQCFIWVF*LRVNSG
Trigger: TCCACTGTTCACCCTCAACAAGAAGACCCAAATAAA...ACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGATATGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp AAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAACTTCAACGAGATGTTTCCAAAATaGTTGGAGATCGTGTACGAG +
Preference number: 5 (lower is better)
Translates to: KESCISLYISRTSSFNFNEMFPK*LEIVYE
Trigger: CTCGTACACGATCTCCAACAATTTTGGAAACATCTC...GTTGAAGTTAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000493950.6
CDS-3UTR CAA 90 bp GCTCAAAATTCCTCCATTGAAGATCTTCCACACTGCATAGATTTCACTGATAATTGCACCTCTTTCTTTTaGGTTTGTTTGGAGGCCATG +
Preference number: 5 (lower is better)
Translates to: AQNSSIEDLPHCIDFTDNCTSFF*VCLEAM
Trigger: CATGGCCTCCAAACAAACCAAAAAGAAAGAGGTGCA...ATTATCAGTGAAATCTATGCAGTGTGGAAGATCTTCAATGGAGGAATTTTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR CAA 90 bp CATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAACTCAGGAGCCTTTAGTGTaGTCAAAGAACTTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: HLRSPAFPYTYPGLHPLTQEPLV*SKNFQV
Trigger: AACCTGAAAGTTCTTTGACAACACTAAAGGCTCCTG...AGTTAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp CTTCATCTAAGGAGTCCTGCATTTCCTTATACATATCCAGGACTTCATCCTTTAAATGAAAGAATGTGCTaGCTAGACTGGGAGCTCAAA +
Preference number: 5 (lower is better)
Translates to: LHLRSPAFPYTYPGLHPLNERMC*LDWELK
Trigger: TTTGAGCTCCCAGTCTAGCAAGCACATTCTTTCATT...TAAAGGATGAAGTCCTGGATATGTATAAGGAAATGCAGGACTCCTTAGATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp TCCAGGACTTCATCCTTTAACTTCAACCGCTCTTCTTGGTCAATGTTTCGAATGCTCAGACAGAGTAATTaGATTTGCTGGAGTATAAAG +
Preference number: 5 (lower is better)
Translates to: SRTSSFNFNRSSWSMFRMLRQSN*ICWSIK
Trigger: CTTTATACTCCAGCAAATCAAATTACTCTGTCTGAG...CATTCGAAACATTGACCAAGAAGAGCGGTTGAAGTTAAAGGATGAAGTCCTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp TTTCATAATCAACAGAGACTGTTCCGTAAATCGGCAGCTCTCTGGTTCAAAGTTAATAATTCTGATTCATaGTGTTCAGTGACCAACCTC +
Preference number: 5 (lower is better)
Translates to: FHNQQRLFRKSAALWFKVNNSDS*CSVTNL
Trigger: GAGGTTGGTCACTGAACACAATGAATCAGAATTATT...AACTTTGAACCAGAGAGCTGCCGATTTACGGAACAGTCTCTGTTGATTATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS-3UTR CAA 90 bp ATCTCATCAGCTCGCTGCAGAGTAAATGTTCATTTGCTGAAAATAAGTCAAACGGAATTTCCCCTTCTTTaGTTCAGTAGAACCAGATTG +
Preference number: 5 (lower is better)
Translates to: ISSARCRVNVHLLKISQTEFPLL*FSRTRL
Trigger: CAATCTGGTTCTACTGAACAAAAGAAGGGGAAATTC...CGTTTGACTTATTTTCAGCAAATGAACATTTACTCTGCAGCGAGCTGATGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR CAA 90 bp ATAATCCATCTCATCAGCTCGCTGCAGAGTAAATGTTCATTTGCTGAAAATAAGCTCAAAATTCCTCCATaGAAGATCTTCCACACTGCA +
Preference number: 5 (lower is better)
Translates to: IIHLISSLQSKCSFAENKLKIPP*KIFHTA
Trigger: TGCAGTGTGGAAGATCTTCAATGGAGGAATTTTGAG...CTTATTTTCAGCAAATGAACATTTACTCTGCAGCGAGCTGATGAGATGGATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS-3UTR CAA 90 bp CTGATTCAATTCATCTGTTTGCAGCAGAGGATCTGTATCTGTTTTCCGAACATACATTTGACCTGTGAGTaGCTTATTCACACTTTGGAA +
Preference number: 5 (lower is better)
Translates to: LIQFICLQQRICICFPNIHLTCE*LIHTLE
Trigger: TTCCAAAGTGTGAATAAGCAACTCACAGGTCAAATG...TATGTTCGGAAAACAGATACAGATCCTCTGCTGCAAACAGATGAATTGAATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493950.6
CDS CAA 72 bp CCGTGCGCCGAGTTGATACGATGCACCTCTTTCTTTTaGGTTTGTTTGGAGGCCATGGCAGAAGCCGATCTA +
Preference number: 6 (lower is better)
Translates to: PCAELIRCTSFF*VCLEAMAEADL
Trigger: TAGATCGGCTTCTGCCATGGCCTCCAAACAAACCAAAAAGAAAGAGGTGCATCGTATCAACTCGGCGCACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326929.8
ENST00000397944.8
ENST00000493950.6
ENST00000522242.5
ENST00000522396.5
CDS CAA 90 bp TTATCCGATCCGTGCGCCGAGTTGATACGATGCACCTCTTTCTTTTaGGTTTGTTTGGAGGCCATGGCAGAAGCCGATCTATGTAGGGCT +
Preference number: 6 (lower is better)
Translates to: LSDPCAELIRCTSFF*VCLEAMAEADLCRA
Trigger: AGCCCTACATAGATCGGCTTCTGCCATGGCCTCCAAACAAACCAAAAAGAAAGAGGTGCATCGTATCAACTCGGCGCACGGATCGGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326929.8
ENST00000397944.8
ENST00000493950.6
ENST00000522242.5
ENST00000522396.5
CDS TCA 72 bp AGAGAAATGACTTCTGGTAACCATCCTGTGAGCGCATaGATAACCGTGAACTCCCCCAGCTCTCTCCTGTCT +
Preference number: 6 (lower is better)
Translates to: REMTSGNHPVSA*ITVNSPSSLLS
Trigger: AGACAGGAGAGAGCTGGGGGAGTTCACGGTTATTCATGCGCTCACAGGATGGTTACCAGAAGTCATTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326929.8
ENST00000397944.8
ENST00000681847.1
CDS GCA 72 bp TCCTCGGCCTTGGACTCTTTCGATTTATCCGATCCGTaGGCCGAGTTGATACGATGCACCTCTTTCTTTTTG +
Preference number: 6 (lower is better)
Translates to: SSALDSFDLSDP*AELIRCTSFFL
Trigger: CAAAAAGAAAGAGGTGCATCGTATCAACTCGGCGCACGGATCGGATAAATCGAAAGAGTCCAAGGCCGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS CAA 90 bp CCTGAGAAGCCTCAAAATCCAGTAGGGTTTATTTGGGTCTTCTTGTaGAGGGTGAACAGTGGATATCTGAGGCTCAAAGCGAGGTGCTTG +
Preference number: 6 (lower is better)
Translates to: PEKPQNPVGFIWVFL*RVNSGYLRLKARCL
Trigger: CAAGCACCTCGCTTTGAGCCTCAGATATCCACTGTTCACCCTCAACAAGAAGACCCAAATAAACCCTACTGGATTTTGAGGCTTCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480328.6
ENST00000523560.1
CDS CAA 90 bp GTCAGCTTCACTCCACTCTGGCCAGAGTGGGAATTTCCCCTTCTTTaGTTCAGTAGAACCAGATTGTACATTACTGATTCTGAAGGGCGT +
Preference number: 6 (lower is better)
Translates to: VSFTPLWPEWEFPLL*FSRTRLYITDSEGR
Trigger: ACGCCCTTCAGAATCAGTAATGTACAATCTGGTTCTACTGAACAAAAGAAGGGGAAATTCCCACTCTGGCCAGAGTGGAGTGAAGCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522396.5
CDS GCA 72 bp TTCGATTTATCCGATCCGTGCGCCGAGTTGATACGATaGACCTCTTTCTTTTTGGTTTGTTTGGAGGCCATG +
Preference number: 6 (lower is better)
Translates to: FDLSDPCAELIR*TSFFLVCLEAM
Trigger: CATGGCCTCCAAACAAACCAAAAAGAAAGAGGTGCATCGTATCAACTCGGCGCACGGATCGGATAAATCGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326929.8
ENST00000397944.8
ENST00000493950.6
ENST00000522242.5
ENST00000522396.5
CDS CAA 90 bp GTCAGCTTCACTCCACTCTGGCCAGAGTGGGAATTTCCCCTTCTTTaGTTCAGTAGAACCAGATTGTACATTACTGCCAAAAGGATAGAA +
Preference number: 6 (lower is better)
Translates to: VSFTPLWPEWEFPLL*FSRTRLYITAKRIE
Trigger: TTCTATCCTTTTGGCAGTAATGTACAATCTGGTTCTACTGAACAAAAGAAGGGGAAATTCCCACTCTGGCCAGAGTGGAGTGAAGCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326929.8
ENST00000397944.8
ENST00000493950.6
ENST00000681847.1
CDS GCA 72 bp ATGAATAACCGTGAACTCCCCCAGCTCTCTCCTGTCTaGTACATGGATGTCAATATTTGCCAGCTTGATAAT +
Preference number: 6 (lower is better)
Translates to: MNNRELPQLSPV*YMDVNICQLDN
Trigger: ATTATCAAGCTGGCAAATATTGACATCCATGTAGCAGACAGGAGAGAGCTGGGGGAGTTCACGGTTATTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326929.8
ENST00000397944.8
ENST00000681847.1
CDS CAA 90 bp GTCAGCTTCACTCCACTCTGGCCAGAGTGGGAATTTCCCCTTCTTTaGTTCAGTAGAACCAGATTGTACATTATCTTTCGATTTATCCGA +
Preference number: 6 (lower is better)
Translates to: VSFTPLWPEWEFPLL*FSRTRLYIIFRFIR
Trigger: TCGGATAAATCGAAAGATAATGTACAATCTGGTTCTACTGAACAAAAGAAGGGGAAATTCCCACTCTGGCCAGAGTGGAGTGAAGCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522242.5
CDS GCA 72 bp CCAGATTGTACATTATCTTTCGATTTATCCGATCCGTaGGCCGAGTTGATACGATGCACCTCTTTCTTTTTG +
Preference number: 6 (lower is better)
Translates to: PDCTLSFDLSDP*AELIRCTSFFL
Trigger: CAAAAAGAAAGAGGTGCATCGTATCAACTCGGCGCACGGATCGGATAAATCGAAAGATAATGTACAATCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522242.5
CDS TCA 72 bp TCCAGTAAAGTTTCACAACATACTTTCCATAGCTATTaGACAAAGGCATATGACCCTTCACAGCCTTGCACA +
Preference number: 6 (lower is better)
Translates to: SSKVSQHTFHSY*TKAYDPSQPCT
Trigger: TGTGCAAGGCTGTGAAGGGTCATATGCCTTTGTTCAATAGCTATGGAAAGTATGTTGTGAAACTTTACTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326929.8
ENST00000397944.8
ENST00000493950.6
ENST00000681847.1
CDS CAA 72 bp GATTGTTATCTTCATCAAAAGGCAAAAAGTCATCAATaGTTATCTTTCTCCAGCAACCCATCCAGTAAAGTT +
Preference number: 6 (lower is better)
Translates to: DCYLHQKAKSHQ*LSFSSNPSSKV
Trigger: AACTTTACTGGATGGGTTGCTGGAGAAAGATAACAATTGATGACTTTTTGCCTTTTGATGAAGATAACAATC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326929.8
ENST00000397944.8
ENST00000473647.1
ENST00000681847.1