RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADCYAP1R1 (Homo sapiens)

Ensembl gene IDs: ENSG00000078549

Ensembl transcript IDs: ENST00000304166.9, ENST00000396211.6, ENST00000409363.5, ENST00000409489.5, ENST00000431811.5, ENST00000436116.1, ENST00000614107.4

Found 746 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGAGCACCCGGACACCAAGATGCCAGGCGAGTGCCAGGAGGCCTaGACCAAGGGGTGTTCTGGCCACCCGAGCTGGCCCTCTGCTAGG +
Preference number: 1 (lower is better)
Translates to: AEHPDTKMPGECQEA*TKGCSGHPSWPSAR
Trigger: CCTAGCAGAGGGCCAGCTCGGGTGGCCAGAACACCCCTTGGTGCAGGCCTCCTGGCACTCGCCTGGCATCTTGGTGTCCGGGTGCTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 90 bp AGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGATaGCAGGGGCTGCACCACTCCAGCCCTGATAGAGGCAAAGCTACA +
Preference number: 1 (lower is better)
Translates to: RLVQLPQVRQEPCLR*QGLHHSSPDRGKAT
Trigger: TGTAGCTTTGCCTCTATCAGGGCTGGAGTGGTGCAGCCCCTGGCATCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CCA 90 bp CTGAACCCAACTGGGATAGAGTCTAGTTCCCTGAACCCTAGGCCATaGCTCCTTCCAAGCAGCCCAGACCCCCTAGCAGTGCCCAAAATG +
Preference number: 1 (lower is better)
Translates to: LNPTGIESSSLNPRP*LLPSSPDPLAVPKM
Trigger: CATTTTGGGCACTGCTAGGGGGTCTGGGCTGCTTGGAAGGAGCCATGGCCTAGGGTTCAGGGAACTAGACTCTATCCCAGTTGGGTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CCA 90 bp TCTCCCCACACCACACTGACTCCATTGCTTCTCCTGCAAGAGTCCTaGACAACCTTCGGTCACCAGAGCCCCACTCCTGTGCAAGGTTAC +
Preference number: 1 (lower is better)
Translates to: SPHTTLTPLLLLQES*TTFGHQSPTPVQGY
Trigger: GTAACCTTGCACAGGAGTGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAGTCAGTGTGGTGTGGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 90 bp AAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAAGCCCAAGTCCTTaGTCCTTGCTCAGGGCTCTTCTAGCTGACTTCCATGGTCCCTGG +
Preference number: 1 (lower is better)
Translates to: KVKQARSKAWRSPSP*SLLRALLADFHGPW
Trigger: CCAGGGACCATGGAAGTCAGCTAGAAGAGCCCTGAGCAAGGAGCAAGGACTTGGGCTTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR TCA 90 bp GTCAGGTGCAGGGTAGAAGGGCCACTGCACACTCCAAGATCAATCTaGGTCACCAAGCATGCCCAGGAAAGGGCAGGTAGCTCCTTTCTT +
Preference number: 1 (lower is better)
Translates to: VRCRVEGPLHTPRSI*VTKHAQERAGSSFL
Trigger: AAGAAAGGAGCTACCTGCCCTTTCCTGGGCATGCTTGGTGACTCAGATTGATCTTGGAGTGTGCAGTGGCCCTTCTACCCTGCACCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR TCA 90 bp GGAGCTGGCCACTGGAGGTGGCACCCCACCCCAGCAAGGTATATATaGCTGCATCTATACATCATGCCCAAGGCACCTGTTCAAATGTCC +
Preference number: 1 (lower is better)
Translates to: GAGHWRWHPTPARYI*LHLYIMPKAPVQMS
Trigger: GGACATTTGAACAGGTGCCTTGGGCATGATGTATAGATGCAGTCATATATACCTTGCTGGGGTGGGGTGCCACCTCCAGTGGCCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 90 bp GGACCATGTACTCTAGCACTTTCCTCTACCTCCCCAGCTGGGCACTaGCCTATTTTACATTCTCAGGCTGAGGGTGTGCAACCTGCAGCT +
Preference number: 1 (lower is better)
Translates to: GPCTLALSSTSPAGH*PILHSQAEGVQPAA
Trigger: AGCTGCAGGTTGCACACCCTCAGCCTGAGAATGTAAAATAGGGCAGTGCCCAGCTGGGGAGGTAGAGGAAAGTGCTAGAGTACATGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 90 bp CTTCGGTCACCAGAGCCCCACTCCTGTGCAAGGTTACATGCGTACTaGATGGATGCTTTGAGTGTCACATTCTGCTCATGTGCAGGGCTA +
Preference number: 1 (lower is better)
Translates to: LRSPEPHSCARLHAY*MDALSVTFCSCAGL
Trigger: TAGCCCTGCACATGAGCAGAATGTGACACTCAAAGCATCCATGCAGTACGCATGTAACCTTGCACAGGAGTGGGGCTCTGGTGACCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 90 bp GGACAACCTTCGGTCACCAGAGCCCCACTCCTGTGCAAGGTTACATaGGTACTGCATGGATGCTTTGAGTGTCACATTCTGCTCATGTGC +
Preference number: 1 (lower is better)
Translates to: GQPSVTRAPLLCKVT*VLHGCFECHILLMC
Trigger: GCACATGAGCAGAATGTGACACTCAAAGCATCCATGCAGTACGCATGTAACCTTGCACAGGAGTGGGGCTCTGGTGACCGAAGGTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CCA 90 bp CCCATTACCCAGATTAGGAGGCCGAGGCCCAAAGAAGGTAAGCCCTaGATCACAGAGCAGGTGGCTAAGCCCAGGTTAAAAAGTAGGTCT +
Preference number: 1 (lower is better)
Translates to: PITQIRRPRPKEGKP*ITEQVAKPRLKSRS
Trigger: AGACCTACTTTTTAACCTGGGCTTAGCCACCTGCTCTGTGATCCAGGGCTTACCTTCTTTGGGCCTCGGCCTCCTAATCTGGGTAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR TCA 90 bp AGAGAGAGAGAGAGAGTCCCTTTGAGCTTTCCCTTCCACAAAGAGTaGGGATCAGATGAGAGAGGTGAGTGGGCATCCTTGGCGGGGATT +
Preference number: 1 (lower is better)
Translates to: RERERVPLSFPFHKE*GSDERGEWASLAGI
Trigger: AATCCCCGCCAAGGATGCCCACTCACCTCTCTCATCTGATCCTCACTCTTTGTGGAAGGGAAAGCTCAAAGGGACTCTCTCTCTCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 90 bp TGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCACTCCTGTaGAAGGTTACATGCGTACTGCATGGATGCTTTGAGTGTCACATT +
Preference number: 1 (lower is better)
Translates to: CKSPGQPSVTRAPLL*KVTCVLHGCFECHI
Trigger: AATGTGACACTCAAAGCATCCATGCAGTACGCATGTAACCTTGCACAGGAGTGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CCA 90 bp TCACCAAGCATGCCCAGGAAAGGGCAGGTAGCTCCTTTCTTCCTCTaGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACA +
Preference number: 1 (lower is better)
Translates to: SPSMPRKGQVAPFFL*LCQRSRNLLDWPRT
Trigger: TGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGAGGAAGAAAGGAGCTACCTGCCCTTTCCTGGGCATGCTTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR TCA 90 bp GACTGCATCTATACATCATGCCCAAGGCACCTGTTCAAATGTCCATaGCCTAATCCTTCCTTCCAGGCCACCAGCTTCCACTGTGGTGTC +
Preference number: 1 (lower is better)
Translates to: DCIYTSCPRHLFKCP*PNPSFQATSFHCGV
Trigger: GACACCACAGTGGAAGCTGGTGGCCTGGAAGGAAGGATTAGGTCATGGACATTTGAACAGGTGCCTTGGGCATGATGTATAGATGCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CCA 90 bp GGCAGGCACCATGCTAGGCCTGCGTGTATTTTCTCATCAGCCCAATaGGGAGGTTTGACCTATAGATCTCCAAGTTTCCTCCCAGCTTTA +
Preference number: 1 (lower is better)
Translates to: GRHHARPACIFSSAQ*GGLTYRSPSFLPAL
Trigger: TAAAGCTGGGAGGAAACTTGGAGATCTATAGGTCAAACCTCCCCATTGGGCTGATGAGAAAATACACGCAGGCCTAGCATGGTGCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 90 bp ACCAGAGCCCCACTCCTGTGCAAGGTTACATGCGTACTGCATGGATaGTTTGAGTGTCACATTCTGCTCATGTGCAGGGCTATGCATAAA +
Preference number: 1 (lower is better)
Translates to: TRAPLLCKVTCVLHG*FECHILLMCRAMHK
Trigger: TTTATGCATAGCCCTGCACATGAGCAGAATGTGACACTCAAAGCATCCATGCAGTACGCATGTAACCTTGCACAGGAGTGGGGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CCA 90 bp CCTAGAGAAGCATTGGAAGTTGCCTCATCTCACAAATGGGAAAACTaGAGCCCAGAACAAGGAGCATCGTGTCCACAGTCACAGCAGTCT +
Preference number: 1 (lower is better)
Translates to: PREALEVASSHKWEN*SPEQGASCPQSQQS
Trigger: AGACTGCTGTGACTGTGGACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAACTTCCAATGCTTCTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CCA 90 bp ACAGGATTTCTTATCCTTTCCTGGCCCAGGCAAATACCACAGTCCTaGGGCCCATTCCAAGTAGATGGCTGGTGTTTAGACAGAGTTCCA +
Preference number: 1 (lower is better)
Translates to: TGFLILSWPRQIPQS*GPFQVDGWCLDRVP
Trigger: TGGAACTCTGTCTAAACACCAGCCATCTACTTGGAATGGGCCCCAGGACTGTGGTATTTGCCTGGGCCAGGAAAGGATAAGAAATCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 90 bp ACCAAAATGTCCCAGATCCTTGAAGTTGACTCCCAGGGGCATGGCTaGTATCACCCATATGGAAGTATCCTCACTCTGATCCCAACAGAA +
Preference number: 1 (lower is better)
Translates to: TKMSQILEVDSQGHG*YHPYGSILTLIPTE
Trigger: TTCTGTTGGGATCAGAGTGAGGATACTTCCATATGGGTGATAGCAGCCATGCCCCTGGGAGTCAACTTCAAGGATCTGGGACATTTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CCA 90 bp TGGGTCTCCCAAACTCCGTCTCTTTCGCAATCACAGCCACATTTCTaGCTCTCAGCTCCTTTTGGATCAAACGAAAAGCACCAGAACCTT +
Preference number: 1 (lower is better)
Translates to: WVSQTPSLSQSQPHF*LSAPFGSNEKHQNL
Trigger: AAGGTTCTGGTGCTTTTCGTTTGATCCAAAAGGAGCTGAGAGCCAGAAATGTGGCTGTGATTGCGAAAGAGACGGAGTTTGGGAGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CCA 90 bp CCTTTCTTCCTCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTaGCCAAGGACACAGAGCTCCTCTCTAAATTACAGCAACAAGAGC +
Preference number: 1 (lower is better)
Translates to: PFFLWLCQRSRNLLD*PRTQSSSLNYSNKS
Trigger: GCTCTTGTTGCTGTAATTTAGAGAGGAGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGAGGAAGAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CCA 90 bp CTAATCCTTCCTTCCAGGCCACCAGCTTCCACTGTGGTGTCCAAATaGAAGGGACAGAAGGTCCATTTCCAAGAAAGGGAAAATAAACAG +
Preference number: 1 (lower is better)
Translates to: LILPSRPPASTVVSK*KGQKVHFQERENKQ
Trigger: CTGTTTATTTTCCCTTTCTTGGAAATGGACCTTCTGTCCCTTCCATTTGGACACCACAGTGGAAGCTGGTGGCCTGGAAGGAAGGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR TCA 90 bp AGCTCCTTTCTTCCTCTGGCTTTGCCAAAGATCCAGGAACTTACTTaGCTGGCCAAGGACACAGAGCTCCTCTCTAAATTACAGCAACAA +
Preference number: 1 (lower is better)
Translates to: SSFLPLALPKIQELT*LAKDTELLSKLQQQ
Trigger: TTGTTGCTGTAATTTAGAGAGGAGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGAGGAAGAAAGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CCA 90 bp CCTTGCTCCTTGCTCAGGGCTCTTCTAGCTGACTTCCATGGTCCCTaGGCTCAAGGAGGACTTTATGACAAAGTATTAATACTTTATGAT +
Preference number: 1 (lower is better)
Translates to: PCSLLRALLADFHGP*AQGGLYDKVLILYD
Trigger: ATCATAAAGTATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGCTAGAAGAGCCCTGAGCAAGGAGCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 90 bp ACATGCGTACTGCATGGATGCTTTGAGTGTCACATTCTGCTCATGTaGAGGGCTATGCATAAATTGGTGAGCCATTTACTCATTCAGATT +
Preference number: 1 (lower is better)
Translates to: TCVLHGCFECHILLM*RAMHKLVSHLLIQI
Trigger: AATCTGAATGAGTAAATGGCTCACCAATTTATGCATAGCCCTGCACATGAGCAGAATGTGACACTCAAAGCATCCATGCAGTACGCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR TCA 90 bp TTGAGTGTCACATTCTGCTCATGTGCAGGGCTATGCATAAATTGGTaGGCCATTTACTCATTCAGATTTATAAAACATACTGGATCCCAC +
Preference number: 1 (lower is better)
Translates to: LSVTFCSCAGLCINW*AIYSFRFIKHTGSH
Trigger: GTGGGATCCAGTATGTTTTATAAATCTGAATGAGTAAATGGCTCACCAATTTATGCATAGCCCTGCACATGAGCAGAATGTGACACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGGCGTGGGCTGGCACCTaGCTGCGGTCCCAGCCTGTG +
Preference number: 2 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGAWAGT*LRSQPV
Trigger: CACAGGCTGGGACCGCAGGCAGGTGCCAGCCCACGC...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
3UTR CAA 90 bp GGTGTTCTGGCCACCCGAGCTGGCCCTCTGCTAGGCTTCAGGGACTaGGGCCCAGGACTGAGAAGAGCCCCAGGGTGGCATGCACACTCG +
Preference number: 2 (lower is better)
Translates to: GVLATRAGPLLGFRD*GPGLRRAPGWHAHS
Trigger: CGAGTGTGCATGCCACCCTGGGGCTCTTCTCAGTCCTGGGCCCAAGTCCCTGAAGCCTAGCAGAGGGCCAGCTCGGGTGGCCAGAACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGCAAACATGCGTGGGCTaGCACCTGCCTGCGGTCCCA +
Preference number: 2 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGQTCVG*HLPAVP
Trigger: TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTG...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
3UTR-3UTR CCA 90 bp CTCCATTGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCAGGGGTCGGGCAGCCCTaGGCCCCAGATTCGGGTGCA +
Preference number: 2 (lower is better)
Translates to: LHCFSCKSPGQPSVTRAPGVGQP*APDSGA
Trigger: TGCACCCGAATCTGGGGCCCAGGGCTGCCCGACCCC...TGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp TCCCCAGCTGGGCACTGCCCTATTTTACATTCTCAGGCTGAGGGTGTGCAACCTGCGTGGGCTGGCACCTaGCTGCGGTCCCAGCCTGTG +
Preference number: 2 (lower is better)
Translates to: SPAGHCPILHSQAEGVQPAWAGT*LRSQPV
Trigger: CACAGGCTGGGACCGCAGGCAGGTGCCAGCCCACGC...AGGTTGCACACCCTCAGCCTGAGAATGTAAAATAGGGCAGTGCCCAGCTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp GCCACATCAGCAGCAGCCTCTGCTAATGGGCATGTTGGGTGTGGCTTCTCCCGACATCATCCATGGGAGTaGGGGTCGGGCAGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: ATSAAASANGHVGCGFSRHHPWE*GSGSPG
Trigger: CCCAGGGCTGCCCGACCCCCACTCCCATGGATGATG...TCGGGAGAAGCCACACCCAACATGCCCATTAGCAGAGGCTGCTGCTGATGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp GCCACATCAGCAGCAGCCTCTGCTAATGGGCATGTTGGGTGTGGCTTCTCCCGATGCGGTCCCAGCCTGTaGATGGAGGAGAGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: ATSAAASANGHVGCGFSRCGPSL*MEERRR
Trigger: CCTCCTCCTCTCCTCCATCCACAGGCTGGGACCGCA...TCGGGAGAAGCCACACCCAACATGCCCATTAGCAGAGGCTGCTGCTGATGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp GGAGGGCTTAAGGGCTCTCTGTGGTGTGCATGGTTGGAGACAGCTTCTGGAAGGAGCCCCAGGGTGGCATaGACACTCGAGGGGTCACAC +
Preference number: 2 (lower is better)
Translates to: GGLKGSLWCAWLETASGRSPRVA*TLEGSH
Trigger: GTGTGACCCCTCGAGTGTGCATGCCACCCTGGGGCT...CCTTCCAGAAGCTGTCTCCAACCATGCACACCACAGAGAGCCCTTAAGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTGCGTGGGCTGGCACCTaGCTGCGGTCCCAGCCTGTG +
Preference number: 2 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRAAWAGT*LRSQPV
Trigger: CACAGGCTGGGACCGCAGGCAGGTGCCAGCCCACGC...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp GGAGGGCTTAAGGGCTCTCTGTGGTGTGCATGGTTGGAGACAGCTTCTGGAAGGGAAGAGGCGCAAACATaGGTGGGCTGGCACCTGCCT +
Preference number: 2 (lower is better)
Translates to: GGLKGSLWCAWLETASGREEAQT*VGWHLP
Trigger: AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTC...CCTTCCAGAAGCTGTCTCCAACCATGCACACCACAGAGAGCCCTTAAGCCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp GGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACAATTCCAGTCTTGCGGTCCCAGCCTGTaGATGGAGGAGAGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: GTTVGGTSTKTRRGQFQSCGPSL*MEERRR
Trigger: CCTCCTCCTCTCCTCCATCCACAGGCTGGGACCGCA...AGACTGGAATTGTCCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
3UTR-3UTR CCA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGAGGCGCAAACATGCGTaGGCTGGCACCTGCCTGCGG +
Preference number: 2 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGRRKHA*AGTCLR
Trigger: CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCT...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
3UTR-3UTR CCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGAGCTCCTCATCATCCATaGGAGTGGGGGTCGGGCAGC +
Preference number: 2 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRAPHHP*EWGSGS
Trigger: GCTGCCCGACCCCCACTCCCATGGATGATGAGGAGC...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGAGAAGAGGCGCAAACATaGGTGGGCTGGCACCTGCCT +
Preference number: 2 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLREEAQT*VGWHLP
Trigger: AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTC...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp GGAGGGCTTAAGGGCTCTCTGTGGTGTGCATGGTTGGAGACAGCTTCTGGAAGGGAACCTTCCCTGACCTaGAGACTCCCCACCCAAACT +
Preference number: 2 (lower is better)
Translates to: GGLKGSLWCAWLETASGREPSLT*RLPTQT
Trigger: AGTTTGGGTGGGGAGTCTGCAGGTCAGGGAAGGTTC...CCTTCCAGAAGCTGTCTCCAACCATGCACACCACAGAGAGCCCTTAAGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp GCATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACACAAACATGCGTGGGCTaGCACCTGCCTGCGGTCCCA +
Preference number: 2 (lower is better)
Translates to: ASCPSLYTHTHTHTHTHTQTCVG*HLPAVP
Trigger: TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTCACCAAGGGGTGTTCTaGCCACCCGAGCTGGCCCTC +
Preference number: 2 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRAHQGVF*PPELAL
Trigger: GAGGGCCAGCTCGGGTGGCCAGAACACCCCTTGGTG...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp GCATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACAGTGGTAGGGAGCAGCTaGCACATCAGCAGCAGCCTC +
Preference number: 2 (lower is better)
Translates to: ASCPSLYTHTHTHTHTHTVVGSS*HISSSL
Trigger: GAGGCTGCTGCTGATGTGGCAGCTGCTCCCTACCAC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTGGCCCCAGATTCGGGTaGAGGTGCTTCAGGATTCGC +
Preference number: 2 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRAGPRFG*RCFRIR
Trigger: GCGAATCCTGAAGCACCTGCACCCGAATCTGGGGCC...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp GGAATGGGCACACCAAAATGTCCCAGATCCTTGAAGTTGACTCCCAGGGGCATGAGAGGAGCTGGTGTCTaGGGCTCCTCATCATCCATG +
Preference number: 2 (lower is better)
Translates to: GMGTPKCPRSLKLTPRGMRGAGV*GSSSSM
Trigger: CATGGATGATGAGGAGCCCCAGACACCAGCTCCTCT...CATGCCCCTGGGAGTCAACTTCAAGGATCTGGGACATTTTGGTGTGCCCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCTGGGCATGTTGGGTGTaGCTTCTCCCGACACCCCAG +
Preference number: 2 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPWACWV*LLPTPQ
Trigger: CTGGGGTGTCGGGAGAAGCCACACCCAACATGCCCA...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp GGAATGGGCACACCAAAATGTCCCAGATCCTTGAAGTTGACTCCCAGGGGCATGTCCCTGCTCCCTGGCTaGACACTCATGACAGGGAAA +
Preference number: 2 (lower is better)
Translates to: GMGTPKCPRSLKLTPRGMSLLPG*TLMTGK
Trigger: TTTCCCTGTCATGAGTGTCCAGCCAGGGAGCAGGGA...CATGCCCCTGGGAGTCAACTTCAAGGATCTGGGACATTTTGGTGTGCCCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CAA 90 bp AAGCCCAGGTTAAAAAGTAGGTCTCCCCACACCACACTGACTCCATaGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGC +
Preference number: 2 (lower is better)
Translates to: KPRLKSRSPHTTLTP*LLLQESWTTFGHQS
Trigger: GCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAGTCAGTGTGGTGTGGGGAGACCTACTTTTTAACCTGGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp TCCCCAGCTGGGCACTGCCCTATTTTACATTCTCAGGCTGAGGGTGTGCAACCTGAACCCTGTCCATCTTaGGCTGGGGGTAAAACAATG +
Preference number: 2 (lower is better)
Translates to: SPAGHCPILHSQAEGVQPEPCPS*AGGKTM
Trigger: CATTGTTTTACCCCCAGCTCAAGATGGACAGGGTTC...AGGTTGCACACCCTCAGCCTGAGAATGTAAAATAGGGCAGTGCCCAGCTGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp CTCCATTGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCAAGAGATTTCAATAGTTaGGTCCAGGCCAGAGGAGCT +
Preference number: 2 (lower is better)
Translates to: LHCFSCKSPGQPSVTRAPRDFNS*VQARGA
Trigger: AGCTCCTCTGGCCTGGACTCAACTATTGAAATCTCT...TGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGAACTCCAAGATCAATCTaGGTCACCAAGCATGCCCAG +
Preference number: 2 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRTPRSI*VTKHAQ
Trigger: CTGGGCATGCTTGGTGACTCAGATTGATCTTGGAGT...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp CTCCATTGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCACCCAATGGGGAGGTTTaGCCTATAGATCTCCAAGTT +
Preference number: 2 (lower is better)
Translates to: LHCFSCKSPGQPSVTRAPPNGEV*PIDLQV
Trigger: AACTTGGAGATCTATAGGTCAAACCTCCCCATTGGG...TGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGATCCCCAGCTGGGCACTaGCCTATTTTACATTCTCAG +
Preference number: 2 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRSPAGH*PILHSQ
Trigger: CTGAGAATGTAAAATAGGGCAGTGCCCAGCTGGGGA...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp TTGCCTCATCTCACAAATGGGAAAACTGGAGCCCAGAACAAGGAGCATCGTGTCACAAGGCCTCACAGCTaGGGTCAGGCCATCACTGAG +
Preference number: 2 (lower is better)
Translates to: LPHLTNGKTGAQNKEHRVTRPHS*GQAITE
Trigger: CTCAGTGATGGCCTGACCCCAGCTGTGAGGCCTTGT...GACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp CTCCATTGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCACACCAAATGCTGACATaGAATGAGCTAGGCCACACA +
Preference number: 2 (lower is better)
Translates to: LHCFSCKSPGQPSVTRAPHQMLT*NELGHT
Trigger: TGTGTGGCCTAGCTCATTCCATGTCAGCATTTGGTG...TGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGCCTTGGATCTGGAGCTaGCCACTGGAGGTGGCACCC +
Preference number: 2 (lower is better)
Translates to: INGSSSSSKVCGAYLALLPWIWS*PLEVAP
Trigger: GGGTGCCACCTCCAGTGGCCAGCTCCAGATCCAAGG...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATACACCAGAACCTTCCCTaGCCTGCAGACTCCCCACCC +
Preference number: 2 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLIHQNLP*PADSPP
Trigger: GGGTGGGGAGTCTGCAGGTCAGGGAAGGTTCTGGTG...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp GGAATGGGCACACCAAAATGTCCCAGATCCTTGAAGTTGACTCCCAGGGGCATGCAGCCTCAGCATCCTTaGCTTGGAATCCCATTTCCT +
Preference number: 2 (lower is better)
Translates to: GMGTPKCPRSLKLTPRGMQPQHP*LGIPFP
Trigger: AGGAAATGGGATTCCAAGTCAAGGATGCTGAGGCTG...CATGCCCCTGGGAGTCAACTTCAAGGATCTGGGACATTTTGGTGTGCCCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTTTTACATTCTCAGGCTaGGGGTGTGCAACCTGCAGC +
Preference number: 2 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRAFTFSG*GCATCS
Trigger: GCTGCAGGTTGCACACCCTCAGCCTGAGAATGTAAA...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGAATTCTGTGTCCATCTaGGCCCTCTGGCCTCCCCCT +
Preference number: 2 (lower is better)
Translates to: INGSSSSSKVCGAYLALLNSVSI*ALWPPP
Trigger: AGGGGGAGGCCAGAGGGCTCAGATGGACACAGAATT...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTAGATTCGGGTGCAGGTaGTTCAGGATTCGCCGACAT +
Preference number: 2 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRARFGCR*FRIRRH
Trigger: ATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCT...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp GCATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATCCCCAGCTGGGCACTaGCCTATTTTACATTCTCAG +
Preference number: 2 (lower is better)
Translates to: ASCPSLYTHTHTHTHTHTSPAGH*PILHSQ
Trigger: CTGAGAATGTAAAATAGGGCAGTGCCCAGCTGGGGA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAAGATCATGAGGTCAGGTaGAGGGTAGAAGGGCCACTG +
Preference number: 2 (lower is better)
Translates to: RHMGNESRSNKPGAKRGEDHEVR*RVEGPL
Trigger: CAGTGGCCCTTCTACCCTGCACCTGACCTCATGATC...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp CTCCATTGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCATGCATCTATACATCATaGCCAAGGCACCTGTTCAAA +
Preference number: 2 (lower is better)
Translates to: LHCFSCKSPGQPSVTRAPCIYTS*PRHLFK
Trigger: TTTGAACAGGTGCCTTGGGCATGATGTATAGATGCA...TGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATTGTGGTGTGCATGGTTaGAGACAGCTTCTGGAAGGC +
Preference number: 2 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHCGVHG*RQLLEG
Trigger: GCCTTCCAGAAGCTGTCTCCAACCATGCACACCACA...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCTGTGGTGTGCATGGTTaGAGACAGCTTCTGGAAGGC +
Preference number: 2 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPCGVHG*RQLLEG
Trigger: GCCTTCCAGAAGCTGTCTCCAACCATGCACACCACA...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp GCATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATCTCTGTGGTGTGCATaGTTGGAGACAGCTTCTGGA +
Preference number: 2 (lower is better)
Translates to: ASCPSLYTHTHTHTHTHTSLWCA*LETASG
Trigger: TCCAGAAGCTGTCTCCAACCATGCACACCACAGAGA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp GGAATGGGCACACCAAAATGTCCCAGATCCTTGAAGTTGACTCCCAGGGGCATGTCAGCATCCTTGACTTaGAATCCCATTTCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: GMGTPKCPRSLKLTPRGMSASLT*NPISSR
Trigger: CCTGGAGGAAATGGGATTCCAAGTCAAGGATGCTGA...CATGCCCCTGGGAGTCAACTTCAAGGATCTGGGACATTTTGGTGTGCCCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CAA 90 bp CGTCTCTTTCGCAATCACAGCCACATTTCTGGCTCTCAGCTCCTTTaGGATCAAACGAAAAGCACCAGAACCTTCCCTGACCTGCAGACT +
Preference number: 2 (lower is better)
Translates to: RLFRNHSHISGSQLL*DQTKSTRTFPDLQT
Trigger: AGTCTGCAGGTCAGGGAAGGTTCTGGTGCTTTTCGTTTGATCCAAAAGGAGCTGAGAGCCAGAAATGTGGCTGTGATTGCGAAAGAGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp TTGCCTCATCTCACAAATGGGAAAACTGGAGCCCAGAACAAGGAGCATCGTGTCATCCAGGAACTTACTTaGCTGGCCAAGGACACAGAG +
Preference number: 2 (lower is better)
Translates to: LPHLTNGKTGAQNKEHRVIQELT*LAKDTE
Trigger: CTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGAT...GACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGACATCAAAACCTGATATaGGGCACAATGATGAATGCC +
Preference number: 2 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRHQNLI*GTMMNA
Trigger: GGCATTCATCATTGTGCCTCATATCAGGTTTTGATG...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACACCCGGACACCAAGATaGCAGGCGAGTGCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNTRTPR*QASARR
Trigger: CCTCCTGGCACTCGCCTGGCATCTTGGTGTCCGGGT...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGACACATTCTGCTCATGTaGAGGGCTATGCATAAATTG +
Preference number: 2 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRHILLM*RAMHKL
Trigger: CAATTTATGCATAGCCCTGCACATGAGCAGAATGTG...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTAGGGGTCGGGCAGCCCTaGGCCCCAGATTCGGGTGCA +
Preference number: 2 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLGVGQP*APDSGA
Trigger: TGCACCCGAATCTGGGGCCCAGGGCTGCCCGACCCC...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGACTGCTATCACCCATATaGAAGTATCCTCACTCTGAT +
Preference number: 2 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRLLSPI*KYPHSD
Trigger: ATCAGAGTGAGGATACTTCCATATGGGTGATAGCAG...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATACCATTTCCTCCAGGATaGGAGTCCCTCCCTGACACT +
Preference number: 2 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLIPFPPG*ESLPDT
Trigger: AGTGTCAGGGAGGGACTCTCATCCTGGAGGAAATGG...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGATGTGTCAAGCAGGGTaGCAGAGCTACACACTGGGA +
Preference number: 2 (lower is better)
Translates to: INGSSSSSKVCGAYLALLMCQAG*QSYTLG
Trigger: TCCCAGTGTGTAGCTCTGTCACCCTGCTTGACACAT...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATAGGGCTCTCTGTGGTGTaGATGGTTGGAGACAGCTTC +
Preference number: 2 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLIGLSVV*MVGDSF
Trigger: GAAGCTGTCTCCAACCATGCACACCACAGAGAGCCC...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAATGTCCACAGGACCCTTaGTTCAGTAATGCACACCAG +
Preference number: 2 (lower is better)
Translates to: RHMGNESRSNKPGAKRGECPQDP*FSNAHQ
Trigger: CTGGTGTGCATTACTGAAGCAAGGGTCCTGTGGACA...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGCAGGAAGCAGCACAGTaGATGGGGTTCAGGGTTGAT +
Preference number: 2 (lower is better)
Translates to: INGSSSSSKVCGAYLALLQEAAQ*MGFRVD
Trigger: ATCAACCCTGAACCCCATGCACTGTGCTGCTTCCTG...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATAGTGAGCAGGGACACTaGGGCAAAGGGGGAAGGGAT +
Preference number: 2 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHSEQGH*GKGGRD
Trigger: ATCCCTTCCCCCTTTGCCCCAGTGTCCCTGCTCACT...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp GGAATGGGCACACCAAAATGTCCCAGATCCTTGAAGTTGACTCCCAGGGGCATGATCTGCTCACAAGACTaGCAAAAATTCACTCAGACG +
Preference number: 2 (lower is better)
Translates to: GMGTPKCPRSLKLTPRGMICSQD*QKFTQT
Trigger: CGTCTGAGTGAATTTTTGCCAGTCTTGTGAGCAGAT...CATGCCCCTGGGAGTCAACTTCAAGGATCTGGGACATTTTGGTGTGCCCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACAGACCTGACTGGAAGTaGGCAGGGACACTGGGGCAA +
Preference number: 2 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNRPDWK*AGTLGQ
Trigger: TTGCCCCAGTGTCCCTGCTCACTTCCAGTCAGGTCT...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAACTGGCTGGACACTCATaGCAGGGAAAGAGAAATTTC +
Preference number: 2 (lower is better)
Translates to: RHMGNESRSNKPGAKRGELAGHS*QGKRNF
Trigger: GAAATTTCTCTTTCCCTGTCATGAGTGTCCAGCCAG...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGGGCGGGGATTATAGATaGAGGTGTCTCTCAAGCCTA +
Preference number: 2 (lower is better)
Translates to: INGSSSSSKVCGAYLALLGGDYR*RCLSSL
Trigger: TAGGCTTGAGAGACACCTGCATCTATAATCCCCGCC...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATGAGTATTTACATGTCTaGGGTCAGGGCCCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHEYLHV*GQGPGD
Trigger: GTCCCCTGGGCCCTGACCCCAGACATGTAAATACTC...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATACTCTACCTCCCCAGCTaGGCACTGCCCTATTTTACA +
Preference number: 2 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLILYLPS*ALPYFT
Trigger: TGTAAAATAGGGCAGTGCCCAGCTGGGGAGGTAGAG...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGGCTCCTTTCTTCCTCTaGCTTTGCCAAAGATCCAGG +
Preference number: 2 (lower is better)
Translates to: INGSSSSSKVCGAYLALLAPFFL*LCQRSR
Trigger: CCTGGATCTTTGGCAAAGCCAGAGGAAGAAAGGAGC...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATGTCATGATGAATGAATaGGGTCCATCCCCAGGGGGC +
Preference number: 2 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHVMMNE*GPSPGG
Trigger: GCCCCCTGGGGATGGACCCCATTCATTCATCATGAC...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATGATGAGAGAGGTGAGTaGGCATCCTTGGCGGGGATT +
Preference number: 2 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHDERGE*ASLAGI
Trigger: AATCCCCGCCAAGGATGCCCACTCACCTCTCTCATC...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATTCCAGAGCATCATCATaGAACAAGTCTGCAAACAGA +
Preference number: 2 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHSRASS*NKSANR
Trigger: TCTGTTTGCAGACTTGTTTCATGATGATGCTCTGGA...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATCATCAAAACCTGATATaGGGCACAATGATGAATGCC +
Preference number: 2 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHHQNLI*GTMMNA
Trigger: GGCATTCATCATTGTGCCTCATATCAGGTTTTGATG...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATAGAGAGAGAGTCCCTTTaGGCTTTCCCTTCCACAAAG +
Preference number: 2 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLIERESL*AFPSTK
Trigger: CTTTGTGGAAGGGAAAGCTCAAAGGGACTCTCTCTC...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp TGGTGTTTAGACAGAGTTCCAGAGATGCATTGGGCTATATACAAATCATCTAGTACAAGGCCTCACAGCTaGGGTCAGGCCATCACTGAG +
Preference number: 2 (lower is better)
Translates to: WCLDRVPEMHWAIYKSSSTRPHS*GQAITE
Trigger: CTCAGTGATGGCCTGACCCCAGCTGTGAGGCCTTGT...ACTAGATGATTTGTATATAGCCCAATGCATCTCTGGAACTCTGTCTAAACACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTAGGCCCCAGATTCGGGTaGAGGTGCTTCAGGATTCGC +
Preference number: 2 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLGPRFG*RCFRIR
Trigger: GCGAATCCTGAAGCACCTGCACCCGAATCTGGGGCC...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAAAGAAGCATTGGAAGTTaGCTCATCTCACAAATGGGA +
Preference number: 2 (lower is better)
Translates to: RHMGNESRSNKPGAKRGERSIGS*LISQMG
Trigger: TCCCATTTGTGAGATGAGGCAACTTCCAATGCTTCT...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATGGGAGTCATGAAGTCTaGAGTGCTAGGAACTACCAC +
Preference number: 2 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHGSHEV*SARNYH
Trigger: GTGGTAGTTCCTAGCACTGCAGACTTCATGACTCCC...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATAAGAGGAGCTGGTGTCTaGGGCTCCTCATCATCCATG +
Preference number: 2 (lower is better)
Translates to: THTHTHTHTHTYIHQNLIRGAGV*GSSSSM
Trigger: CATGGATGATGAGGAGCCCCAGACACCAGCTCCTCT...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATAAGATTCGGGTGCAGGTaGTTCAGGATTCGCCGACAT +
Preference number: 2 (lower is better)
Translates to: THTHTHTHTHTYIHQNLIRFGCR*FRIRRH
Trigger: ATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCT...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGAGGCACAATGATGAATaGCCTTTTACCTGTCTTGAC +
Preference number: 2 (lower is better)
Translates to: INGSSSSSKVCGAYLALLRHNDE*PFTCLD
Trigger: GTCAAGACAGGTAAAAGGGCATTCATCATTGTGCCT...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp TGGTGTTTAGACAGAGTTCCAGAGATGCATTGGGCTATATACAAATCATCTAGTCACCAGCTTCCACTGTaGTGTCCAAATGGAAGGGAC +
Preference number: 2 (lower is better)
Translates to: WCLDRVPEMHWAIYKSSSHQLPL*CPNGRD
Trigger: GTCCCTTCCATTTGGACACCACAGTGGAAGCTGGTG...ACTAGATGATTTGTATATAGCCCAATGCATCTCTGGAACTCTGTCTAAACACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAAATCATGAAACAAGTCTaGAAACAGAATTTGGACAGG +
Preference number: 2 (lower is better)
Translates to: RHMGNESRSNKPGAKRGEIMKQV*KQNLDR
Trigger: CCTGTCCAAATTCTGTTTGCAGACTTGTTTCATGAT...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATATGCATCTATACATCATaGCCAAGGCACCTGTTCAAA +
Preference number: 2 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLICIYTS*PRHLFK
Trigger: TTTGAACAGGTGCCTTGGGCATGATGTATAGATGCA...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTAGAGTATTTACATGTCTaGGGTCAGGGCCCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLEYLHV*GQGPGD
Trigger: GTCCCCTGGGCCCTGACCCCAGACATGTAAATACTC...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACGCTCTCAGCTCCTTTTaGATCAAACGAAAAGCACCA +
Preference number: 2 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNALSSF*IKRKAP
Trigger: TGGTGCTTTTCGTTTGATCCAAAAGGAGCTGAGAGC...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTATCAGAGGCAGGTGGCTaGTACATCCTAGTCATGGCT +
Preference number: 2 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLSEAGG*YILVMA
Trigger: AGCCATGACTAGGATGTACCAGCCACCTGCCTCTGA...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp TGGTGTTTAGACAGAGTTCCAGAGATGCATTGGGCTATATACAAATCATCTAGTCTGTTCAAATGTCCATaGCCTAATCCTTCCTTCCAG +
Preference number: 2 (lower is better)
Translates to: WCLDRVPEMHWAIYKSSSLFKCP*PNPSFQ
Trigger: CTGGAAGGAAGGATTAGGTCATGGACATTTGAACAG...ACTAGATGATTTGTATATAGCCCAATGCATCTCTGGAACTCTGTCTAAACACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR TCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTAAGAGATTTCAATAGTTaGGTCCAGGCCAGAGGAGCT +
Preference number: 2 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLRDFNS*VQARGA
Trigger: AGCTCCTCTGGCCTGGACTCAACTATTGAAATCTCT...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATACAAAGGGGGAAGGGATaGGACAACTTTTCCAAATTT +
Preference number: 2 (lower is better)
Translates to: THTHTHTHTHTYIHQNLIQRGKG*DNFSKF
Trigger: AAATTTGGAAAAGTTGTCCCATCCCTTCCCCCTTTG...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATTCTGCAAACAGAATTTaGACAGGAGTAACACCAAAT +
Preference number: 2 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHSANRI*TGVTPN
Trigger: ATTTGGTGTTACTCCTGTCCAAATTCTGTTTGCAGA...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR GCA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATAAAGTATTATCACTTTaGTGGCTTCACTTTGAAGTG +
Preference number: 2 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHKVLSL*WLHFEV
Trigger: CACTTCAAAGTGAAGCCAGCAAAGTGATAATACTTT...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTACAAAGGGGGAAGGGATaGGACAACTTTTCCAAATTT +
Preference number: 2 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLQRGKG*DNFSKF
Trigger: AAATTTGGAAAAGTTGTCCCATCCCTTCCCCCTTTG...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CCA 90 bp TGGTGTTTAGACAGAGTTCCAGAGATGCATTGGGCTATATACAAATCATCTAGTTCTGCAAACAGAATTTaGACAGGAGTAACACCAAAT +
Preference number: 2 (lower is better)
Translates to: WCLDRVPEMHWAIYKSSSSANRI*TGVTPN
Trigger: ATTTGGTGTTACTCCTGTCCAAATTCTGTTTGCAGA...ACTAGATGATTTGTATATAGCCCAATGCATCTCTGGAACTCTGTCTAAACACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 72 bp CCGGACACCAAGATGCCAGGCGAGTGCCAGGAGGCCTaGACCAAGGGGTGTTCTGGCCACCCGAGCTGGCCC +
Preference number: 3 (lower is better)
Translates to: PDTKMPGECQEA*TKGCSGHPSWP
Trigger: GGGCCAGCTCGGGTGGCCAGAACACCCCTTGGTGCAGGCCTCCTGGCACTCGCCTGGCATCTTGGTGTCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR TCA 72 bp AGGCTGACCAAGAAACAGTGGGGTGGAGCTGAGACCTaGCTGGAAGTGAGCAGGGACACTGGGGCAAAGGGG +
Preference number: 3 (lower is better)
Translates to: RLTKKQWGGAET*LEVSRDTGAKG
Trigger: CCCCTTTGCCCCAGTGTCCCTGCTCACTTCCAGTCAGGTCTCAGCTCCACCCCACTGTTTCTTGGTCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CAA 90 bp CTCCATTGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCACTAGGCTTCAGGGACTaGGGCCCAGGACTGAGAAGA +
Preference number: 3 (lower is better)
Translates to: LHCFSCKSPGQPSVTRAPLGFRD*GPGLRR
Trigger: TCTTCTCAGTCCTGGGCCCAAGTCCCTGAAGCCTAG...TGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 72 bp CACACCAGTGCAGGTGGAGGGGATCATGAGGTCAGGTaGAGGGTAGAAGGGCCACTGCACACTCCAAGATCA +
Preference number: 3 (lower is better)
Translates to: HTSAGGGDHEVR*RVEGPLHTPRS
Trigger: TGATCTTGGAGTGTGCAGTGGCCCTTCTACCCTGCACCTGACCTCATGATCCCCTCCACCTGCACTGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CCA 72 bp GGGCTCTCTGTGGTGTGCATGGTTGGAGACAGCTTCTaGAAGGCATCCATGAGGGTGGAAGAGGTGGAAGGG +
Preference number: 3 (lower is better)
Translates to: GLSVVCMVGDSF*KASMRVEEVEG
Trigger: CCCTTCCACCTCTTCCACCCTCATGGATGCCTTCCAGAAGCTGTCTCCAACCATGCACACCACAGAGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR TCA 72 bp GGGTGTGGCTTCTCCCGACACCCCAGCAGCCCATGGTaGGTCAAGGTCAAGGGCATAAAAGGGACATCTTTG +
Preference number: 3 (lower is better)
Translates to: GCGFSRHPSSPW*VKVKGIKGTSL
Trigger: CAAAGATGTCCCTTTTATGCCCTTGACCTTGACTCACCATGGGCTGCTGGGGTGTCGGGAGAAGCCACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CCA 72 bp ACCACACTGACTCCATTGCTTCTCCTGCAAGAGTCCTaGACAACCTTCGGTCACCAGAGCCCCACTCCTGTG +
Preference number: 3 (lower is better)
Translates to: TTLTPLLLLQES*TTFGHQSPTPV
Trigger: CACAGGAGTGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAGTCAGTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CAA 90 bp GCCACATCAGCAGCAGCCTCTGCTAATGGGCATGTTGGGTGTGGCTTCTCCCGAGGCTCTCAGCTCCTTTaGGATCAAACGAAAAGCACC +
Preference number: 3 (lower is better)
Translates to: ATSAAASANGHVGCGFSRGSQLL*DQTKST
Trigger: GGTGCTTTTCGTTTGATCCAAAAGGAGCTGAGAGCC...TCGGGAGAAGCCACACCCAACATGCCCATTAGCAGAGGCTGCTGCTGATGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR TCA 72 bp AGGGTAGAAGGGCCACTGCACACTCCAAGATCAATCTaGGTCACCAAGCATGCCCAGGAAAGGGCAGGTAGC +
Preference number: 3 (lower is better)
Translates to: RVEGPLHTPRSI*VTKHAQERAGS
Trigger: GCTACCTGCCCTTTCCTGGGCATGCTTGGTGACTCAGATTGATCTTGGAGTGTGCAGTGGCCCTTCTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 72 bp CAAGCCAGGAGCAAAGCGTGGAGAAGCCCAAGTCCTTaGTCCTTGCTCAGGGCTCTTCTAGCTGACTTCCAT +
Preference number: 3 (lower is better)
Translates to: QARSKAWRSPSP*SLLRALLADFH
Trigger: ATGGAAGTCAGCTAGAAGAGCCCTGAGCAAGGAGCAAGGACTTGGGCTTCTCCACGCTTTGCTCCTGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CCA 72 bp CAGATTAGGAGGCCGAGGCCCAAAGAAGGTAAGCCCTaGATCACAGAGCAGGTGGCTAAGCCCAGGTTAAAA +
Preference number: 3 (lower is better)
Translates to: QIRRPRPKEGKP*ITEQVAKPRLK
Trigger: TTTTAACCTGGGCTTAGCCACCTGCTCTGTGATCCAGGGCTTACCTTCTTTGGGCCTCGGCCTCCTAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CAA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGAGATCCAGGAACTTACTaGACTGGCCAAGGACACAGA +
Preference number: 3 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRDPGTY*TGQGHR
Trigger: TCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATC...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR TCA 72 bp CACTGGAGGTGGCACCCCACCCCAGCAAGGTATATATaGCTGCATCTATACATCATGCCCAAGGCACCTGTT +
Preference number: 3 (lower is better)
Translates to: HWRWHPTPARYI*LHLYIMPKAPV
Trigger: AACAGGTGCCTTGGGCATGATGTATAGATGCAGTCATATATACCTTGCTGGGGTGGGGTGCCACCTCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 72 bp ACTCTAGCACTTTCCTCTACCTCCCCAGCTGGGCACTaGCCTATTTTACATTCTCAGGCTGAGGGTGTGCAA +
Preference number: 3 (lower is better)
Translates to: TLALSSTSPAGH*PILHSQAEGVQ
Trigger: TTGCACACCCTCAGCCTGAGAATGTAAAATAGGGCAGTGCCCAGCTGGGGAGGTAGAGGAAAGTGCTAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 72 bp TCGGTCACCAGAGCCCCACTCCTGTGCAAGGTTACATaGGTACTGCATGGATGCTTTGAGTGTCACATTCTG +
Preference number: 3 (lower is better)
Translates to: SVTRAPLLCKVT*VLHGCFECHIL
Trigger: CAGAATGTGACACTCAAAGCATCCATGCAGTACGCATGTAACCTTGCACAGGAGTGGGGCTCTGGTGACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CAA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGCCCAGATCCTTGAAGTaGACTCCCAGGGGCATGGCT +
Preference number: 3 (lower is better)
Translates to: INGSSSSSKVCGAYLALLPRSLK*TPRGMA
Trigger: AGCCATGCCCCTGGGAGTCAACTTCAAGGATCTGGG...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 72 bp GGAGGTGGCACCCCACCCCAGCAAGGTATATATGACTaGATCTATACATCATGCCCAAGGCACCTGTTCAAA +
Preference number: 3 (lower is better)
Translates to: GGGTPPQQGIYD*IYTSCPRHLFK
Trigger: TTTGAACAGGTGCCTTGGGCATGATGTATAGATGCAGTCATATATACCTTGCTGGGGTGGGGTGCCACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 72 bp CCACTCCTGTGCAAGGTTACATGCGTACTGCATGGATaGTTTGAGTGTCACATTCTGCTCATGTGCAGGGCT +
Preference number: 3 (lower is better)
Translates to: PLLCKVTCVLHG*FECHILLMCRA
Trigger: AGCCCTGCACATGAGCAGAATGTGACACTCAAAGCATCCATGCAGTACGCATGTAACCTTGCACAGGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 72 bp CCAGAGCCCCACTCCTGTGCAAGGTTACATGCGTACTaGATGGATGCTTTGAGTGTCACATTCTGCTCATGT +
Preference number: 3 (lower is better)
Translates to: PEPHSCARLHAY*MDALSVTFCSC
Trigger: ACATGAGCAGAATGTGACACTCAAAGCATCCATGCAGTACGCATGTAACCTTGCACAGGAGTGGGGCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 72 bp TCCCAGATCCTTGAAGTTGACTCCCAGGGGCATGGCTaGTATCACCCATATGGAAGTATCCTCACTCTGATC +
Preference number: 3 (lower is better)
Translates to: SQILEVDSQGHG*YHPYGSILTLI
Trigger: GATCAGAGTGAGGATACTTCCATATGGGTGATAGCAGCCATGCCCCTGGGAGTCAACTTCAAGGATCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CCA 72 bp ATGCCCAGGAAAGGGCAGGTAGCTCCTTTCTTCCTCTaGCTTTGCCAAAGATCCAGGAACTTACTTGACTGG +
Preference number: 3 (lower is better)
Translates to: MPRKGQVAPFFL*LCQRSRNLLDW
Trigger: CCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGAGGAAGAAAGGAGCTACCTGCCCTTTCCTGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CAA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCGGCTCTCAGCTCCTTTaGGATCAAACGAAAAGCACC +
Preference number: 3 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPGSQLL*DQTKST
Trigger: GGTGCTTTTCGTTTGATCCAAAAGGAGCTGAGAGCC...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CAA 90 bp CTCCATTGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCAAGGGCTATGCATAAATaGGTGAGCCATTTACTCATT +
Preference number: 3 (lower is better)
Translates to: LHCFSCKSPGQPSVTRAPRAMHK*VSHLLI
Trigger: AATGAGTAAATGGCTCACCAATTTATGCATAGCCCT...TGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR TCA 72 bp TATACATCATGCCCAAGGCACCTGTTCAAATGTCCATaGCCTAATCCTTCCTTCCAGGCCACCAGCTTCCAC +
Preference number: 3 (lower is better)
Translates to: YTSCPRHLFKCP*PNPSFQATSFH
Trigger: GTGGAAGCTGGTGGCCTGGAAGGAAGGATTAGGTCATGGACATTTGAACAGGTGCCTTGGGCATGATGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR TCA 72 bp CCTGTGCAAGGTTACATGCGTACTGCATGGATGCTTTaGGTGTCACATTCTGCTCATGTGCAGGGCTATGCA +
Preference number: 3 (lower is better)
Translates to: PVQGYMRTAWML*VSHSAHVQGYA
Trigger: TGCATAGCCCTGCACATGAGCAGAATGTGACACTCAAAGCATCCATGCAGTACGCATGTAACCTTGCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CAA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCGAGAAGCATTGGAAGTaGCCTCATCTCACAAATGGG +
Preference number: 3 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPEKHWK*PHLTNG
Trigger: CCCATTTGTGAGATGAGGCAACTTCCAATGCTTCTC...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CCA 72 bp CATGCTAGGCCTGCGTGTATTTTCTCATCAGCCCAATaGGGAGGTTTGACCTATAGATCTCCAAGTTTCCTC +
Preference number: 3 (lower is better)
Translates to: HARPACIFSSAQ*GGLTYRSPSFL
Trigger: GAGGAAACTTGGAGATCTATAGGTCAAACCTCCCCATTGGGCTGATGAGAAAATACACGCAGGCCTAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CAA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATAGGGCCTAGAGAAGCATaGGAAGTTGCCTCATCTCAC +
Preference number: 3 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLIGPREA*EVASSH
Trigger: GTGAGATGAGGCAACTTCCAATGCTTCTCTAGGCCC...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATACTGTGGTGTGCATGGTaGGAGACAGCTTCTGGAAGG +
Preference number: 3 (lower is better)
Translates to: THTHTHTHTHTYIHQNLILWCAW*ETASGR
Trigger: CCTTCCAGAAGCTGTCTCCAACCATGCACACCACAG...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 72 bp CTGCATGGATGCTTTGAGTGTCACATTCTGCTCATGTaGAGGGCTATGCATAAATTGGTGAGCCATTTACTC +
Preference number: 3 (lower is better)
Translates to: LHGCFECHILLM*RAMHKLVSHLL
Trigger: GAGTAAATGGCTCACCAATTTATGCATAGCCCTGCACATGAGCAGAATGTGACACTCAAAGCATCCATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CCA 72 bp TTGCTCAGGGCTCTTCTAGCTGACTTCCATGGTCCCTaGGCTCAAGGAGGACTTTATGACAAAGTATTAATA +
Preference number: 3 (lower is better)
Translates to: LLRALLADFHGP*AQGGLYDKVLI
Trigger: TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGCTAGAAGAGCCCTGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CAA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGGTCTGCAAACAGAATTaGGACAGGAGTAACACCAAA +
Preference number: 3 (lower is better)
Translates to: INGSSSSSKVCGAYLALLVCKQN*DRSNTK
Trigger: TTTGGTGTTACTCCTGTCCAAATTCTGTTTGCAGAC...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CAA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAAGAACCTCTTGGAACATaGAGAATACATCAGGTACAT +
Preference number: 3 (lower is better)
Translates to: RHMGNESRSNKPGAKRGEEPLGT*RIHQVH
Trigger: ATGTACCTGATGTATTCTCAATGTTCCAAGAGGTTC...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR GCA 72 bp CCCCAAGCATTCCAGAGCATCATCATGAAACAAGTCTaGAAACAGAATTTGGACAGGAGTAACACCAAATGC +
Preference number: 3 (lower is better)
Translates to: PQAFQSIIMKQV*KQNLDRSNTKC
Trigger: GCATTTGGTGTTACTCCTGTCCAAATTCTGTTTGCAGACTTGTTTCATGATGATGCTCTGGAATGCTTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATAGAGAAGCATTGGAAGTaGCCTCATCTCACAAATGGG +
Preference number: 3 (lower is better)
Translates to: THTHTHTHTHTYIHQNLIEKHWK*PHLTNG
Trigger: CCCATTTGTGAGATGAGGCAACTTCCAATGCTTCTC...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR-3UTR CAA 90 bp TGGTGTTTAGACAGAGTTCCAGAGATGCATTGGGCTATATACAAATCATCTAGTATAAAAGGGACATCTTaGCAGAGGTCTCAGAGAGAT +
Preference number: 3 (lower is better)
Translates to: WCLDRVPEMHWAIYKSSSIKGTS*QRSQRD
Trigger: ATCTCTCTGAGACCTCTGCAAAGATGTCCCTTTTAT...ACTAGATGATTTGTATATAGCCCAATGCATCTCTGGAACTCTGTCTAAACACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR TCA 72 bp ACATTCTGCTCATGTGCAGGGCTATGCATAAATTGGTaGGCCATTTACTCATTCAGATTTATAAAACATACT +
Preference number: 3 (lower is better)
Translates to: TFCSCAGLCINW*AIYSFRFIKHT
Trigger: AGTATGTTTTATAAATCTGAATGAGTAAATGGCTCACCAATTTATGCATAGCCCTGCACATGAGCAGAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCCCACTGGCCTCCCACTaGCAGCAGCGGCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSPLASH*QQRQVS
Trigger: GCTGACCTGCCGCTGCTGTCAGTGGGAGGCCAGTGG...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR GCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGGCGTGGGCTGGCACCTaGCTGCGGTCCCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLAWAGT*LRSQPV
Trigger: CACAGGCTGGGACCGCAGGCAGGTGCCAGCCCACGC...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCGTGGGCTGGCACCTaGCTGCGGTCCCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPAWAGT*LRSQPV
Trigger: CACAGGCTGGGACCGCAGGCAGGTGCCAGCCCACGC...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCGCCCCAATGTGTCTCTaGGCTGCTCACTGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSAPMCL*AAHCGA
Trigger: GGCCCCGCAGTGAGCAGCCCAGAGACACATTGGGGC...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCCATCATCCATGGGAGTaGGGGTCGGGCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPAHHPWE*GSGSPG
Trigger: CCCAGGGCTGCCCGACCCCCACTCCCATGGATGATG...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCGGATGGAGAGCTGGGTaGCCCCATTCACCCCACTGC +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSGWRAG*PHSPHC
Trigger: GCAGTGGGGTGAATGGGGGCACCCAGCTCTCCATCC...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCCCCAATGTGTCTCTaGGCTGCTCACTGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPAPMCL*AAHCGA
Trigger: GGCCCCGCAGTGAGCAGCCCAGAGACACATTGGGGC...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGGCCACCACAAAGCCCTaGAAGGAGCCCAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRATTKP*KEPSPS
Trigger: GCTGGGGCTGGGCTCCTTCCAGGGCTTTGTGGTGGC...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCCTGTaGATGGAGGAGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPACGPSL*MEERRR
Trigger: CCTCCTCCTCTCCTCCATCCACAGGCTGGGACCGCA...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCCAAACATGCGTGGGCTaGCACCTGCCTGCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPAQTCVG*HLPAVP
Trigger: TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTG...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTAGGCGCAAACATGCGTaGGCTGGCACCTGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPRRKHA*AGTCLR
Trigger: CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCT...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGTCTGGAGCTGGCCACTaGAGGTGGCACCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLSGAGH*RWHPTP
Trigger: TGGGGTGGGGTGCCACCTCCAGTGGCCAGCTCCAGA...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCCACCAGAACCTTCCCTaGCCTGCAGACTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: QGEGRGANMRGLAPACGPHQNLP*PADSPP
Trigger: GGGTGGGGAGTCTGCAGGTCAGGGAAGGTTCTGGTG...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCACCAGCCATCCTCCGTaGAGTTCCGGCTCACCACTC +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSTSHPP*SSGSPL
Trigger: GAGTGGTGAGCCGGAACTGCACGGAGGATGGCTGGT...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCCATTCACCCCACTaGTGGCCAGAGACGGGTGTC +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGPHSPH*WPETGV
Trigger: GACACCCGTCTCTGGCCAGCAGTGGGGTGAATGGGG...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCCCCCATTCACCCCACTaGTGGCCAGAGACGGGTGTC +
Preference number: 4 (lower is better)
Translates to: QGEGRGANMRGLAPACGPPHSPH*WPETGV
Trigger: GACACCCGTCTCTGGCCAGCAGTGGGGTGAATGGGG...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGGATGGAGAGCTGGGTaGCCCCATTCACCCCACTGC +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPGWRAG*PHSPHC
Trigger: GCAGTGGGGTGAATGGGGGCACCCAGCTCTCCATCC...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCGAAGAGGCGCAAACATaGGTGGGCTGGCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPAEEAQT*VGWHLP
Trigger: AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTC...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCGGCCCCAGATTCGGGTaGAGGTGCTTCAGGATTCGC +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSGPRFG*RCFRIR
Trigger: GCGAATCCTGAAGCACCTGCACCCGAATCTGGGGCC...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCGTGGTAGGGAGCAGCTaGCACATCAGCAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSVVGSS*HISSSL
Trigger: GAGGCTGCTGCTGATGTGGCAGCTGCTCCCTACCAC...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCCATTCACCCCACTGCTaGCCAGAGACGGGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSHSPHC*PETGVG
Trigger: ACCGACACCCGTCTCTGGCCAGCAGTGGGGTGAATG...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGGCTCCTCATCATCCATaGGAGTGGGGGTCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLAPHHP*EWGSGS
Trigger: GCTGCCCGACCCCCACTCCCATGGATGATGAGGAGC...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCTGCCTCCCTGCTCCCTaGCTGGACACTCATGACAGG +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSCLPAP*LDTHDR
Trigger: CCTGTCATGAGTGTCCAGCCAGGGAGCAGGGAGGCA...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CAA 72 bp GCCACCCGAGCTGGCCCTCTGCTAGGCTTCAGGGACTaGGGCCCAGGACTGAGAAGAGCCCCAGGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: ATRAGPLLGFRD*GPGLRRAPGWH
Trigger: ATGCCACCCTGGGGCTCTTCTCAGTCCTGGGCCCAAGTCCCTGAAGCCTAGCAGAGGGCCAGCTCGGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCCGGGCTTCCAACACGTaGTGTTGTCCCACATCCCAG +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPARASNT*CCPTSQ
Trigger: CTGGGATGTGGGACAACATCACGTGTTGGAAGCCCG...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGAGCTCAGGGCAGCTaGCCAGGACCATCTCACCCA +
Preference number: 4 (lower is better)
Translates to: QGEGRGANMRGLAPACGPRAQGS*PGPSHP
Trigger: TGGGTGAGATGGTCCTGGTCAGCTGCCCTGAGCTCT...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCCAACCACAGGGCCTTTaGTCACCCACCACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPAQPQGL*SPTTEL
Trigger: CAGCTCTGTGGTGGGTGATCAAAGGCCCTGTGGTTG...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGCAGGGCTCTTCTAGCTaGCTTCCATGGTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRQGSSS*LPWSLG
Trigger: GCCCAGGGACCATGGAAGTCAGCTAGAAGAGCCCTG...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTTTGCAAGAGTGCTGCTaGGCCCGCTGTGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGLQECC*ARCGLQ
Trigger: CTGCAAGCCACAGCGGGCTCAGCAGCACTCTTGCAA...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTTGCAAGAGTGCTGCTaGGCCCGCTGTGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRLQECC*ARCGLQ
Trigger: CTGCAAGCCACAGCGGGCTCAGCAGCACTCTTGCAA...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGACCAGCCATCCTCCGTaGAGTTCCGGCTCACCACTC +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRTSHPP*SSGSPL
Trigger: GAGTGGTGAGCCGGAACTGCACGGAGGATGGCTGGT...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp CCCAGATTCGGGTGCAGGTGCTTCAGGATTCGCCGACATCAGAGGCAGGTGGCTGCGTGGGCTGGCACCTaGCTGCGGTCCCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PRFGCRCFRIRRHQRQVAAWAGT*LRSQPV
Trigger: CACAGGCTGGGACCGCAGGCAGGTGCCAGCCCACGC...AGCCACCTGCCTCTGATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCGAACCATGTCTGAGATaGCAGGGGCTGCACCACTCC +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPAEPCLR*QGLHHS
Trigger: GGAGTGGTGCAGCCCCTGGCATCTCAGACATGGTTC...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCGAGCCCGCTGTGGCTTaGAGTAGCATTTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPAEPAVA*SSISAR
Trigger: GCGTGCAGAAATGCTACTGCAAGCCACAGCGGGCTC...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCACCATCTCACCCACATaGGCGGGCTTCCAACACGTG +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPATISPT*AGFQHV
Trigger: CACGTGTTGGAAGCCCGCCCATGTGGGTGAGATGGT...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGGCCACCACAAAGCCCTaGAAGGAGCCCAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGATTKP*KEPSPS
Trigger: GCTGGGGCTGGGCTCCTTCCAGGGCTTTGTGGTGGC...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGCATTCACCCCACTGCTaGCCAGAGACGGGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRHSPHC*PETGVG
Trigger: ACCGACACCCGTCTCTGGCCAGCAGTGGGGTGAATG...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCAGGAGGAGGGGAGCATaGCTCAGGTGGCCAGATTGT +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPARRRGA*LRWPDC
Trigger: ACAATCTGGCCACCTGAGCCATGCTCCCCTCCTCCT...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCAGTGAGCAGGGACACTaGGGCAAAGGGGGAAGGGAT +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSSEQGH*GKGGRD
Trigger: ATCCCTTCCCCCTTTGCCCCAGTGTCCCTGCTCACT...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCGCCAGGAGCAAAGCGTaGAGAAGCCCAAGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSARSKA*RSPSPC
Trigger: GCAAGGACTTGGGCTTCTCCACGCTTTGCTCCTGGC...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGGCTTCCAACACGTaGTGTTGTCCCACATCCCAG +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLRASNT*CCPTSQ
Trigger: CTGGGATGTGGGACAACATCACGTGTTGGAAGCCCG...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTTCTCCACCAGCAGAGTaGAGAGGTACAGGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPSPPAE*RGTGPR
Trigger: TCGAGGGCCTGTACCTCTTCACTCTGCTGGTGGAGA...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGCAACCACAGGGCCTTTaGTCACCCACCACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRQPQGL*SPTTEL
Trigger: CAGCTCTGTGGTGGGTGATCAAAGGCCCTGTGGTTG...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCATTCCGAATAGTGGGATaGGCAGCAGGGTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPFRIVG*AAGWTG
Trigger: CCCGGTCCACCCTGCTGCTCATCCCACTATTCGGAA...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCACGGGTGTCGGTGCTTaGAGTCCACAGCGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPATGVGA*SPQRSN
Trigger: GTTACTTCGCTGTGGACTTCAAGCACCGACACCCGT...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp CTCCATTGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCAGGCGGCGTGTGCGTGTaGGCACGCGGGGACCACGCT +
Preference number: 4 (lower is better)
Translates to: LHCFSCKSPGQPSVTRAPGGVCV*ARGDHA
Trigger: AGCGTGGTCCCCGCGTGCGCACACGCACACGCCGCC...TGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGGCAGCCAGGGAAACGTaGACGACACCAGCCATGACA +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRAARET*TTPAMT
Trigger: TGTCATGGCTGGTGTCGTGCACGTTTCCCTGGCTGC...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTGCAGCCAGGGAAACGTaGACGACACCAGCCATGACA +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGAARET*TTPAMT
Trigger: TGTCATGGCTGGTGTCGTGCACGTTTCCCTGGCTGC...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCAGAGACGGGTGTCGGTaGTTGAAGTCCACAGCGAAG +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPARDGCR*LKSTAK
Trigger: CTTCGCTGTGGACTTCAAGCACCGACACCCGTCTCT...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTTTGGGAGCTGCTCTTaGTCAGGATGGAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPAFGSCS*SGWRAG
Trigger: CCCAGCTCTCCATCCTGAGCAAGAGCAGCTCCCAAA...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCCAGGGAGGCCAGACATaGGGATTTGGGAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: QGEGRGANMRGLAPACGPQGGQT*GFGSCS
Trigger: AGAGCAGCTCCCAAATCCGCATGTCTGGCCTCCCTG...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGAAGAGGCGCAAACATaGGTGGGCTGGCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPEEAQT*VGWHLP
Trigger: AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTC...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGAGCCCCAGGGTGGCATaGACACTCGAGGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGSPRVA*TLEGSH
Trigger: GTGTGACCCCTCGAGTGTGCATGCCACCCTGGGGCT...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGGCCCCAGATTCGGGTaGAGGTGCTTCAGGATTCGC +
Preference number: 4 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPGPRFG*RCFRIR
Trigger: GCGAATCCTGAAGCACCTGCACCCGAATCTGGGGCC...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGAACCATGTCTGAGATaGCAGGGGCTGCACCACTCC +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPEPCLR*QGLHHS
Trigger: GGAGTGGTGCAGCCCCTGGCATCTCAGACATGGTTC...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTACCATCTCACCCACATaGGCGGGCTTCCAACACGTG +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPTISPT*AGFQHV
Trigger: CACGTGTTGGAAGCCCGCCCATGTGGGTGAGATGGT...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTACCATCTCACCCACATaGGCGGGCTTCCAACACGTG +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGTISPT*AGFQHV
Trigger: CACGTGTTGGAAGCCCGCCCATGTGGGTGAGATGGT...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGACCATCTCACCCACATaGGCGGGCTTCCAACACGTG +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLTISPT*AGFQHV
Trigger: CACGTGTTGGAAGCCCGCCCATGTGGGTGAGATGGT...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCGTGGAGATGAAGCAGTaGTTGCTGTCCTGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPAVEMKQ*LLSCSA
Trigger: TGCGGAGCAGGACAGCAACCACTGCTTCATCTCCAC...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCCCAGACATGCGGATTTaGGAGCTGCTCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSPDMRI*ELLLLR
Trigger: CCTGAGCAAGAGCAGCTCCCAAATCCGCATGTCTGG...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTGGAGCATGGCTCAGGTaGCCAGATTGTCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGGAWLR*PDCQQG
Trigger: TCCCTGCTGACAATCTGGCCACCTGAGCCATGCTCC...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCGGAGCATGGCTCAGGTaGCCAGATTGTCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QGEGRGANMRGLAPACGPGAWLR*PDCQQG
Trigger: TCCCTGCTGACAATCTGGCCACCTGAGCCATGCTCC...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCCCCAGGGGACCACAGTaGGTGGGACCAGTACCAAAA +
Preference number: 4 (lower is better)
Translates to: QGEGRGANMRGLAPACGPPRGPQ*VGPVPK
Trigger: TTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGG...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGGGGTCCCCCAGCCAATaGTGGTGTACCAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLGSPSQ*WCTSRS
Trigger: ACTTCTACTGGTACACCATCATTGGCTGGGGGACCC...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGACGGGTGTCGGTGCTTaGAGTCCACAGCGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRTGVGA*SPQRSN
Trigger: GTTACTTCGCTGTGGACTTCAAGCACCGACACCCGT...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCAATGCTGACATGGAATaGGCTAGGCCACACACGGAC +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSNADME*ARPHTD
Trigger: GTCCGTGTGTGGCCTAGCTCATTCCATGTCAGCATT...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGGGGAGTCATGATGAATaGATGGGGTCCATCCCCAGG +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRGSHDE*MGSIPR
Trigger: CCTGGGGATGGACCCCATTCATTCATCATGACTCCC...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTGGGAGTCATGATGAATaGATGGGGTCCATCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGGSHDE*MGSIPR
Trigger: CCTGGGGATGGACCCCATTCATTCATCATGACTCCC...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTAGAGACGGGTGTCGGTaGTTGAAGTCCACAGCGAAG +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPRDGCR*LKSTAK
Trigger: CTTCGCTGTGGACTTCAAGCACCGACACCCGTCTCT...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTTTGGGAGCTGCTCTTaGTCAGGATGGAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRFGSCS*SGWRAG
Trigger: CCCAGCTCTCCATCCTGAGCAAGAGCAGCTCCCAAA...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCTGCGGATTTGGGAGCTaGTCTTGCTCAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSCGFGS*SCSGWR
Trigger: TCTCCATCCTGAGCAAGAGCAGCTCCCAAATCCGCA...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp GGAGGGCTTAAGGGCTCTCTGTGGTGTGCATGGTTGGAGACAGCTTCTGGAAGGGCGTGGGCTGGCACCTaGCTGCGGTCCCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GGLKGSLWCAWLETASGRAWAGT*LRSQPV
Trigger: CACAGGCTGGGACCGCAGGCAGGTGCCAGCCCACGC...CCTTCCAGAAGCTGTCTCCAACCATGCACACCACAGAGAGCCCTTAAGCCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTGAACCTTCCCTGACCTaGAGACTCCCCACCCAAACT +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGEPSLT*RLPTQT
Trigger: AGTTTGGGTGGGGAGTCTGCAGGTCAGGGAAGGTTC...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGGATCATGAGGTCAGGTaGAGGGTAGAAGGGCCACTG +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLDHEVR*RVEGPL
Trigger: CAGTGGCCCTTCTACCCTGCACCTGACCTCATGATC...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCAGAGCCCCACTCCTGTaGAAGGTTACATGCGTACTG +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSRAPLL*KVTCVL
Trigger: CAGTACGCATGTAACCTTGCACAGGAGTGGGGCTCT...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCAGCTCATTGGCCCTCTaGATCTTCTCCAGGCACATG +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPASSLAL*IFSRHM
Trigger: CATGTGCCTGGAGAAGATCCAGAGGGCCAATGAGCT...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCCATCCCAGGACAGCCTaGAGAGGAATCATTGAAGCC +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPAHPRTA*RGIIEA
Trigger: GGCTTCAATGATTCCTCTCCAGGCTGTCCTGGGATG...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCGTGGAGATGAAGCAGTaGTTGCTGTCCTGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: QGEGRGANMRGLAPACGPVEMKQ*LLSCSA
Trigger: TGCGGAGCAGGACAGCAACCACTGCTTCATCTCCAC...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAAGGAGGAGGGGAGCATaGCTCAGGTGGCCAGATTGT +
Preference number: 4 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPRRRGA*LRWPDC
Trigger: ACAATCTGGCCACCTGAGCCATGCTCCCCTCCTCCT...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp CCCAGATTCGGGTGCAGGTGCTTCAGGATTCGCCGACATCAGAGGCAGGTGGCTAGGCGCAAACATGCGTaGGCTGGCACCTGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: PRFGCRCFRIRRHQRQVARRKHA*AGTCLR
Trigger: CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCT...AGCCACCTGCCTCTGATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGGGGGACCACAGTGGGTaGGACCAGTACCAAAACAAG +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRGDHSG*DQYQNK
Trigger: CTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCC...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGGAGTATTTACATGTCTaGGGTCAGGGCCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLEYLHV*GQGPGD
Trigger: GTCCCCTGGGCCCTGACCCCAGACATGTAAATACTC...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGTGGTGTGCATGGTTaGAGACAGCTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPACGVHG*RQLLEG
Trigger: GCCTTCCAGAAGCTGTCTCCAACCATGCACACCACA...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCCTCTACCTCCCCAGCTaGGCACTGCCCTATTTTACA +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSLYLPS*ALPYFT
Trigger: TGTAAAATAGGGCAGTGCCCAGCTGGGGAGGTAGAG...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCTGCTGAGCCCGCTGTaGCTTGCAGTAGCATTTCTG +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGLLSPL*LAVAFL
Trigger: CAGAAATGCTACTGCAAGCCACAGCGGGCTCAGCAG...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCCTCTCGGGCTTTCTTaGGGACTCGCGGGCTTAAAT +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLPLGLS*GLAGLN
Trigger: ATTTAAGCCCGCGAGTCCCCAAGAAAGCCCGAGAGG...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409489.5
CDS-3UTR TCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCAGACTTGGTCTGGGTTaGAGATTCGGAAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPARLGLG*RFGRAQ
Trigger: CTGAGCTCTTCCGAATCTTCAACCCAGACCAAGTCT...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCATTCCACAGTGGAGATaGAGCAGTGGTTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSIPQWR*SSGCCP
Trigger: AGGACAGCAACCACTGCTTCATCTCCACTGTGGAAT...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGTCTCCACCAGCAGAGTaGAGAGGTACAGGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGSPPAE*RGTGPR
Trigger: TCGAGGGCCTGTACCTCTTCACTCTGCTGGTGGAGA...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCCCCATGTCTGGAGACTaGAGTTTCTGCACAAGGATG +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPAPMSGD*SFCTRM
Trigger: CATCCTTGTGCAGAAACTTCAGTCTCCAGACATGGG...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTAATGCTGACATGGAATaGGCTAGGCCACACACGGAC +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGNADME*ARPHTD
Trigger: GTCCGTGTGTGGCCTAGCTCATTCCATGTCAGCATT...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCATCCAGGAACTTACTTaGCTGGCCAAGGACACAGAG +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPAIQELT*LAKDTE
Trigger: CTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGAT...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCTCCAGGCACATGGCTTaGTCCTTCTTGAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSSRHMA*SFLKMQ
Trigger: CTGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGA...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTCCAGGCACATGGCTTaGTCCTTCTTGAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: GPAQGEGRGANMRGLAPASRHMA*SFLKMQ
Trigger: CTGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGA...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGAAGTTGCGTGTGCAGTaGAGCTTCCGGAAGCGACAA +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLKLRVQ*SFRKRQ
Trigger: TTGTCGCTTCCGGAAGCTGCACTGCACACGCAACTT...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAAGTTGCGTGTGCAGTaGAGCTTCCGGAAGCGACAA +
Preference number: 4 (lower is better)
Translates to: QGEGRGANMRGLAPACGPKLRVQ*SFRKRQ
Trigger: TTGTCGCTTCCGGAAGCTGCACTGCACACGCAACTT...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGAAGTTGCGTGTGCAGTaGAGCTTCCGGAAGCGACAA +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRKLRVQ*SFRKRQ
Trigger: TTGTCGCTTCCGGAAGCTGCACTGCACACGCAACTT...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTGCGGATTTGGGAGCTaGTCTTGCTCAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRCGFGS*SCSGWR
Trigger: TCTCCATCCTGAGCAAGAGCAGCTCCCAAATCCGCA...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR GCA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCTGCGGATTTGGGAGCTaGTCTTGCTCAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: QGEGRGANMRGLAPACGPCGFGS*SCSGWR
Trigger: TCTCCATCCTGAGCAAGAGCAGCTCCCAAATCCGCA...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTAGCTCATTGGCCCTCTaGATCTTCTCCAGGCACATG +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPSSLAL*IFSRHM
Trigger: CATGTGCCTGGAGAAGATCCAGAGGGCCAATGAGCT...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGAGCTCATTGGCCCTCTaGATCTTCTCCAGGCACATG +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRSSLAL*IFSRHM
Trigger: CATGTGCCTGGAGAAGATCCAGAGGGCCAATGAGCT...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGAGCCCATCAGCTCATTaGCCCTCTGGATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLSPSAH*PSGSSP
Trigger: TGGAGAAGATCCAGAGGGCCAATGAGCTGATGGGCT...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGCATCCCAGGACAGCCTaGAGAGGAATCATTGAAGCC +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRHPRTA*RGIIEA
Trigger: GGCTTCAATGATTCCTCTCCAGGCTGTCCTGGGATG...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTTCGGTCTCCCAGACTTaGTCTGGGTTGAAGATTCGG +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGSVSQT*SGLKIR
Trigger: CCGAATCTTCAACCCAGACCAAGTCTGGGAGACCGA...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTTGTCACACACACAGTTaGGGTCCCCCAGCCAATGAT +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPCHTHS*GPPAND
Trigger: ATCATTGGCTGGGGGACCCCAACTGTGTGTGTGACA...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTGTCACACACACAGTTaGGGTCCCCCAGCCAATGAT +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRCHTHS*GPPAND
Trigger: ATCATTGGCTGGGGGACCCCAACTGTGTGTGTGACA...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGAGGAGGAGGGGAGCATaGCTCAGGTGGCCAGATTGT +
Preference number: 4 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGRRRGA*LRWPDC
Trigger: ACAATCTGGCCACCTGAGCCATGCTCCCCTCCTCCT...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCCTCTACCTCCCCAGCTaGGCACTGCCCTATTTTACA +
Preference number: 4 (lower is better)
Translates to: QGEGRGANMRGLAPACGPLYLPS*ALPYFT
Trigger: TGTAAAATAGGGCAGTGCCCAGCTGGGGAGGTAGAG...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCTGGCTTGCTCCTTCTTaGAGATGCAGTCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSWLAPS*RCSQNA
Trigger: TGCATTCTGACTGCATCTTCAAGAAGGAGCAAGCCA...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGCTGGAGAGGAATCATTaGAGCCCATCAGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRLERNH*SPSAHW
Trigger: CCAATGAGCTGATGGGCTTCAATGATTCCTCTCCAG...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCTGGAGAGGAATCATTaGAGCCCATCAGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLLERNH*SPSAHW
Trigger: CCAATGAGCTGATGGGCTTCAATGATTCCTCTCCAG...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTAGACTTGGTCTGGGTTaGAGATTCGGAAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGRLGLG*RFGRAQ
Trigger: CTGAGCTCTTCCGAATCTTCAACCCAGACCAAGTCT...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTAGACTTGGTCTGGGTTaGAGATTCGGAAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPRLGLG*RFGRAQ
Trigger: CTGAGCTCTTCCGAATCTTCAACCCAGACCAAGTCT...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCCCATGTCTGGAGACTaGAGTTTCTGCACAAGGATG +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLPMSGD*SFCTRM
Trigger: CATCCTTGTGCAGAAACTTCAGTCTCCAGACATGGG...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTTTCGCCATTTTCGCTTaGTCTCCGCTTGTACCTCAC +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPFAIFA*SPLVPH
Trigger: GTGAGGTACAAGCGGAGATCAAGCGAAAATGGCGAA...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGTTCGCCATTTTCGCTTaGTCTCCGCTTGTACCTCAC +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLFAIFA*SPLVPH
Trigger: GTGAGGTACAAGCGGAGATCAAGCGAAAATGGCGAA...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTATCCAGGAACTTACTTaGCTGGCCAAGGACACAGAG +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPIQELT*LAKDTE
Trigger: CTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGAT...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCAGCCTCAGCATCCTTaGCTTGGAATCCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGQPQHP*LGIPFP
Trigger: AGGAAATGGGATTCCAAGTCAAGGATGCTGAGGCTG...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGGAGAGAGAGTCCCTTTaGGCTTTCCCTTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLERESL*AFPSTK
Trigger: CTTTGTGGAAGGGAAAGCTCAAAGGGACTCTCTCTC...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGAGAGAGAGTCCCTTTaGGCTTTCCCTTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPERESL*AFPSTK
Trigger: CTTTGTGGAAGGGAAAGCTCAAAGGGACTCTCTCTC...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTATTTCTGCACGCAGCTaGGGAAAGGGAGTGAATGCT +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPISARS*GKGVNA
Trigger: AGCATTCACTCCCTTTCCTCAGCTGCGTGCAGAAAT...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409489.5
CDS-3UTR TCA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCTGTCTTGGTCTGGGTTaGAGATTCGGAAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: QGEGRGANMRGLAPACGPCLGLG*RFGRAQ
Trigger: CTGAGCTCTTCCGAATCTTCAACCCAGACCAAGACA...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409363.5
CDS-3UTR GCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTTCCCCAGCTGGGCACTaGCCTATTTTACATTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPSPAGH*PILHSQ
Trigger: CTGAGAATGTAAAATAGGGCAGTGCCCAGCTGGGGA...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGGGGAGTCATGAAGTCTaGAGTGCTAGGAACTACCAC +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLGSHEV*SARNYH
Trigger: GTGGTAGTTCCTAGCACTGCAGACTTCATGACTCCC...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTACAGTTCTGACATCTTaGAAGAGTGCTGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPTVLTS*KSAAEP
Trigger: GGGCTCAGCAGCACTCTTGCAAGATGTCAGAACTGT...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAAGCCCATCAGCTCATTaGCCCTCTGGATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPSPSAH*PSGSSP
Trigger: TGGAGAAGATCCAGAGGGCCAATGAGCTGATGGGCT...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTCTCCCAGACTTGGTCTaGGTTGAAGATTCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPLPDLV*VEDSEE
Trigger: CTCTTCCGAATCTTCAACCCAGACCAAGTCTGGGAG...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGCTCCCAGACTTGGTCTaGGTTGAAGATTCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRLPDLV*VEDSEE
Trigger: CTCTTCCGAATCTTCAACCCAGACCAAGTCTGGGAG...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCATTGCCTCCCATGTCTaGAGACTGAAGTTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSIASHV*RLKFLH
Trigger: GTGCAGAAACTTCAGTCTCCAGACATGGGAGGCAAT...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp CCCAGATTCGGGTGCAGGTGCTTCAGGATTCGCCGACATCAGAGGCAGGTGGCTAGAAGAGCCCCAGGGTaGCATGCACACTCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: PRFGCRCFRIRRHQRQVARRAPG*HAHSRG
Trigger: ACCCCTCGAGTGTGCATGCCACCCTGGGGCTCTTCT...AGCCACCTGCCTCTGATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTAGGAACTTACTTGACTaGCCAAGGACACAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPRNLLD*PRTQSS
Trigger: GGAGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCT...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTACCACTCCCATGTCTTaGTCTGGGTTGAAGATTCGG +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGTTPMS*SGLKIR
Trigger: CCGAATCTTCAACCCAGACCAAGACATGGGAGTGGT...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409363.5
3UTR CAA 72 bp CTGCCACATCAGCAGCAGCCTCTGCTAATGGGCATGTaGGGTGTGGCTTCTCCCGACACCCCAGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: LPHQQQPLLMGM*GVASPDTPAAH
Trigger: ATGGGCTGCTGGGGTGTCGGGAGAAGCCACACCCAACATGCCCATTAGCAGAGGCTGCTGCTGATGTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTCCACTGGCCTCCCACTaGCAGCAGCGGCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGPLASH*QQRQVS
Trigger: GCTGACCTGCCGCTGCTGTCAGTGGGAGGCCAGTGG...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR TCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTGGCTTGCTCCTTCTTaGAGATGCAGTCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRWLAPS*RCSQNA
Trigger: TGCATTCTGACTGCATCTTCAAGAAGGAGCAAGCCA...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGTGGCTTGCTCCTTCTTaGAGATGCAGTCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLWLAPS*RCSQNA
Trigger: TGCATTCTGACTGCATCTTCAAGAAGGAGCAAGCCA...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGGTAGAGGGCCTTCACTaGCAGGTAGTAATAATCCTG +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRVEGLH*QVVIIL
Trigger: CAGGATTATTACTACCTGTCAGTGAAGGCCCTCTAC...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAAGATCGCCCTCAGCATaGACGACACAAACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPRSPSA*TTQTGS
Trigger: TGAACCTGTTTGTGTCGTTCATGCTGAGGGCGATCT...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAATTCCACAGTGGAGATaGAGCAGTGGTTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPIPQWR*SSGCCP
Trigger: AGGACAGCAACCACTGCTTCATCTCCACTGTGGAAT...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTAGTGGAAGAAAACCATaGCGGCCTTACATTCCACAG +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPSGRKP*RPYIPQ
Trigger: CTGTGGAATGTAAGGCCGTCATGGTTTTCTTCCACT...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGAGTGGAAGAAAACCATaGCGGCCTTACATTCCACAG +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLSGRKP*RPYIPQ
Trigger: CTGTGGAATGTAAGGCCGTCATGGTTTTCTTCCACT...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp CCCAGATTCGGGTGCAGGTGCTTCAGGATTCGCCGACATCAGAGGCAGGTGGCTAGACCTGACTGGAAGTaGGCAGGGACACTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: PRFGCRCFRIRRHQRQVARPDWK*AGTLGQ
Trigger: TTGCCCCAGTGTCCCTGCTCACTTCCAGTCAGGTCT...AGCCACCTGCCTCTGATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CCCAGATTCGGGTGCAGGTGCTTCAGGATTCGCCGACATCAGAGGCAGGTGGCTCCCAGCAGCCCATGGTaGGTCAAGGTCAAGGGCATA +
Preference number: 4 (lower is better)
Translates to: PRFGCRCFRIRRHQRQVAPSSPW*VKVKGI
Trigger: TATGCCCTTGACCTTGACTCACCATGGGCTGCTGGG...AGCCACCTGCCTCTGATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CTCCATTGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCAGGCAGGAACCATGTCTaGGATGCCAGGGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: LHCFSCKSPGQPSVTRAPGRNHV*DARGCT
Trigger: GGTGCAGCCCCTGGCATCTCAGACATGGTTCCTGCC...TGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTAATGGTGGACAGTTCTaGCATCTTGCAAGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGNGGQF*HLARVL
Trigger: CAGCACTCTTGCAAGATGTCAGAACTGTCCACCATT...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGCGCGGCAGTCCAGCTTaGCTCCGTCCTGCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGRGSPA*LRPAGE
Trigger: CTCTCCCGCAGGACGGAGCCAAGCTGGACTGCCGCG...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304166.9
CDS-3UTR CCA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGAGCTCATTGGCCCTCTaGATCTTCTCCAGGCACATG +
Preference number: 4 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGSSLAL*IFSRHM
Trigger: CATGTGCCTGGAGAAGATCCAGAGGGCCAATGAGCT...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCATTGCCTCCCATGTCTaGAGACTGAAGTTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: QGEGRGANMRGLAPACGPIASHV*RLKFLH
Trigger: GTGCAGAAACTTCAGTCTCCAGACATGGGAGGCAAT...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp CCCAGATTCGGGTGCAGGTGCTTCAGGATTCGCCGACATCAGAGGCAGGTGGCTAGTGAGCAGGGACACTaGGGCAAAGGGGGAAGGGAT +
Preference number: 4 (lower is better)
Translates to: PRFGCRCFRIRRHQRQVASEQGH*GKGGRD
Trigger: ATCCCTTCCCCCTTTGCCCCAGTGTCCCTGCTCACT...AGCCACCTGCCTCTGATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp TCCCCAGCTGGGCACTGCCCTATTTTACATTCTCAGGCTGAGGGTGTGCAACCTCATCATCCATGGGAGTaGGGGTCGGGCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPAGHCPILHSQAEGVQPHHPWE*GSGSPG
Trigger: CCCAGGGCTGCCCGACCCCCACTCCCATGGATGATG...AGGTTGCACACCCTCAGCCTGAGAATGTAAAATAGGGCAGTGCCCAGCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGAAGCAGCACAGTGCATaGGGTTCAGGGTTGATTTTG +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLKQHSA*GSGLIL
Trigger: CAAAATCAACCCTGAACCCCATGCACTGTGCTGCTT...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCTCCCATGTCTTGGTCTaGGTTGAAGATTCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: QGEGRGANMRGLAPACGPSHVLV*VEDSEE
Trigger: CTCTTCCGAATCTTCAACCCAGACCAAGACATGGGA...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409363.5
CDS-3UTR TCA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAAGTGGAAGAAAACCATaGCGGCCTTACATTCCACAG +
Preference number: 4 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPSGRKP*RPYIPQ
Trigger: CTGTGGAATGTAAGGCCGTCATGGTTTTCTTCCACT...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR TCA 90 bp CCCAGATTCGGGTGCAGGTGCTTCAGGATTCGCCGACATCAGAGGCAGGTGGCTACGGGTGTCGGTGCTTaGAGTCCACAGCGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: PRFGCRCFRIRRHQRQVATGVGA*SPQRSN
Trigger: GTTACTTCGCTGTGGACTTCAAGCACCGACACCCGT...AGCCACCTGCCTCTGATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCTCCAGAGCATCATCATaGAACAAGTCTGCAAACAGA +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSSRASS*NKSANR
Trigger: TCTGTTTGCAGACTTGTTTCATGATGATGCTCTGGA...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACTCCAAGATCAATCTaGGTCACCAAGCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGTPRSI*VTKHAQ
Trigger: CTGGGCATGCTTGGTGACTCAGATTGATCTTGGAGT...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCTGTTCAAATGTCCATaGCCTAATCCTTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGLFKCP*PNPSFQ
Trigger: CTGGAAGGAAGGATTAGGTCATGGACATTTGAACAG...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGCCTCCCCCTTACTCCTaGTGCTGGTGGTTTTACAAA +
Preference number: 4 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGPPPYS*CWWFYK
Trigger: TTTGTAAAACCACCAGCATCAGGAGTAAGGGGGAGG...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGAACACCCCAAGACTGTaGGTTCAGGAAAAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRNTPRL*VQEKKE
Trigger: TTCCTTCTTTTCCTGAACTCACAGTCTTGGGGTGTT...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGAGGCAGGAACCATGTCTaGGATGCCAGGGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRGRNHV*DARGCT
Trigger: GGTGCAGCCCCTGGCATCTCAGACATGGTTCCTGCC...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACAATTCCAGTCTCCCCATTCACCCCACTaGTGGCCAGAGACGGGTGTC +
Preference number: 4 (lower is better)
Translates to: GTTVGGTSTKTRRGQFQSPHSPH*WPETGV
Trigger: GACACCCGTCTCTGGCCAGCAGTGGGGTGAATGGGG...AGACTGGAATTGTCCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR GCA 90 bp CCCAGATTCGGGTGCAGGTGCTTCAGGATTCGCCGACATCAGAGGCAGGTGGCTGAACCTTCCCTGACCTaGAGACTCCCCACCCAAACT +
Preference number: 4 (lower is better)
Translates to: PRFGCRCFRIRRHQRQVAEPSLT*RLPTQT
Trigger: AGTTTGGGTGGGGAGTCTGCAGGTCAGGGAAGGTTC...AGCCACCTGCCTCTGATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTTGCGTACTGCATGGATaGTTTGAGTGTCACATTCTG +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGCVLHG*FECHIL
Trigger: CAGAATGTGACACTCAAAGCATCCATGCAGTACGCA...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGCTGTGCAAGGTTACATaGGTACTGCATGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRLCKVT*VLHGCF
Trigger: AAAGCATCCATGCAGTACGCATGTAACCTTGCACAG...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAACACACATAGCCAAGTaGAGAAACACCCCAAGACTG +
Preference number: 4 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPTHIAK*RNTPRL
Trigger: CAGTCTTGGGGTGTTTCTGCACTTGGCTATGTGTGT...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGAATCAGACTCTCCAATaGTTTCGGTCTCCCAGACTT +
Preference number: 4 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRNQTLQ*FRSPRL
Trigger: AAGTCTGGGAGACCGAAACCATTGGAGAGTCTGATT...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp CCCAGATTCGGGTGCAGGTGCTTCAGGATTCGCCGACATCAGAGGCAGGTGGCTGTGGAGATGAAGCAGTaGTTGCTGTCCTGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: PRFGCRCFRIRRHQRQVAVEMKQ*LLSCSA
Trigger: TGCGGAGCAGGACAGCAACCACTGCTTCATCTCCAC...AGCCACCTGCCTCTGATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTACAGCCAGAAGTAGTTaGACACAACACAGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGTARSS*TQHSSG
Trigger: TCCACTACTGTGTTGTGTCCAACTACTTCTGGCTGT...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGACAGCCAGAAGTAGTTaGACACAACACAGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLTARSS*TQHSSG
Trigger: TCCACTACTGTGTTGTGTCCAACTACTTCTGGCTGT...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp CCCAGATTCGGGTGCAGGTGCTTCAGGATTCGCCGACATCAGAGGCAGGTGGCTCCAGACATGCGGATTTaGGAGCTGCTCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PRFGCRCFRIRRHQRQVAPDMRI*ELLLLR
Trigger: CCTGAGCAAGAGCAGCTCCCAAATCCGCATGTCTGG...AGCCACCTGCCTCTGATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GCCACATCAGCAGCAGCCTCTGCTAATGGGCATGTTGGGTGTGGCTTCTCCCGAGGAGCATGGCTCAGGTaGCCAGATTGTCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: ATSAAASANGHVGCGFSRGAWLR*PDCQQG
Trigger: TCCCTGCTGACAATCTGGCCACCTGAGCCATGCTCC...TCGGGAGAAGCCACACCCAACATGCCCATTAGCAGAGGCTGCTGCTGATGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp CCAAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGAGGCGCAAACATGCGTaGGCTGGCACCTGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: PNLRSIYMSGVRAQGTTVRRKHA*AGTCLR
Trigger: CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCT...CACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGCACCAAGGGGTGTTCTaGCCACCCGAGCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGHQGVF*PPELAL
Trigger: GAGGGCCAGCTCGGGTGGCCAGAACACCCCTTGGTG...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATGGGGTCGGGCAGCCCTaGGCCCCAGATTCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHGVGQP*APDSGA
Trigger: TGCACCCGAATCTGGGGCCCAGGGCTGCCCGACCCC...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCGGGGTCGGGCAGCCCTaGGCCCCAGATTCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPGVGQP*APDSGA
Trigger: TGCACCCGAATCTGGGGCCCAGGGCTGCCCGACCCC...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GGAGGGCTTAAGGGCTCTCTGTGGTGTGCATGGTTGGAGACAGCTTCTGGAAGGTGGGCATGTTGGGTGTaGCTTCTCCCGACACCCCAG +
Preference number: 4 (lower is better)
Translates to: GGLKGSLWCAWLETASGRWACWV*LLPTPQ
Trigger: CTGGGGTGTCGGGAGAAGCCACACCCAACATGCCCA...CCTTCCAGAAGCTGTCTCCAACCATGCACACCACAGAGAGCCCTTAAGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGAGGAACTTACTTGACTaGCCAAGGACACAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGRNLLD*PRTQSS
Trigger: GGAGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCT...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp TCCCCAGCTGGGCACTGCCCTATTTTACATTCTCAGGCTGAGGGTGTGCAACCTCCTTGGATCTGGAGCTaGCCACTGGAGGTGGCACCC +
Preference number: 4 (lower is better)
Translates to: SPAGHCPILHSQAEGVQPPWIWS*PLEVAP
Trigger: GGGTGCCACCTCCAGTGGCCAGCTCCAGATCCAAGG...AGGTTGCACACCCTCAGCCTGAGAATGTAAAATAGGGCAGTGCCCAGCTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCTTCCAAGTAGATGGCTaGTGTTTAGACAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSFQVDG*CLDRVP
Trigger: TGGAACTCTGTCTAAACACCAGCCATCTACTTGGAA...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTTACTTAGCTTTACTGTaGGAGATGAAACCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGYLALL*EMKPRL
Trigger: CAGCCTGGGTTTCATCTCCCACAGTAAAGCTAAGTA...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACAATTCCAGTCTAGAGCTCAGGGCAGCTaGCCAGGACCATCTCACCCA +
Preference number: 4 (lower is better)
Translates to: GTTVGGTSTKTRRGQFQSRAQGS*PGPSHP
Trigger: TGGGTGAGATGGTCCTGGTCAGCTGCCCTGAGCTCT...AGACTGGAATTGTCCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGGTAGAGGGCCTTCACTaGCAGGTAGTAATAATCCTG +
Preference number: 4 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGVEGLH*QVVIIL
Trigger: CAGGATTATTACTACCTGTCAGTGAAGGCCCTCTAC...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACAATTCCAGTCTTTCCGAATAGTGGGATaGGCAGCAGGGTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: GTTVGGTSTKTRRGQFQSFRIVG*AAGWTG
Trigger: CCCGGTCCACCCTGCTGCTCATCCCACTATTCGGAA...AGACTGGAATTGTCCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGAGAGATTTCAATAGTTaGGTCCAGGCCAGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGRDFNS*VQARGA
Trigger: AGCTCCTCTGGCCTGGACTCAACTATTGAAATCTCT...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CCCAGATTCGGGTGCAGGTGCTTCAGGATTCGCCGACATCAGAGGCAGGTGGCTTTTACATTCTCAGGCTaGGGGTGTGCAACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PRFGCRCFRIRRHQRQVAFTFSG*GCATCS
Trigger: GCTGCAGGTTGCACACCCTCAGCCTGAGAATGTAAA...AGCCACCTGCCTCTGATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCGAAGTATCCTCACTCTaGTCCCAACAGAAAACTGAA +
Preference number: 4 (lower is better)
Translates to: QGEGRGANMRGLAPACGPEVSSL*SQQKTE
Trigger: TTCAGTTTTCTGTTGGGATCAGAGTGAGGATACTTC...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAAAAAGGACGCGCAGCCTaGAAGTCCGCGGCCCGCGCG +
Preference number: 4 (lower is better)
Translates to: RHMGNESRSNKPGAKRGEKGRAA*KSAARA
Trigger: CGCGCGGGCCGCGGACTTGCAGGCTGCGCGTCCTTT...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGGGATGGAGAGCTGGGTaGCCCCATTCACCCCACTGC +
Preference number: 4 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGGWRAG*PHSPHC
Trigger: GCAGTGGGGTGAATGGGGGCACCCAGCTCTCCATCC...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCTACATCAGGTACATCTaGTCACAAGACTGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: GEGRGANMRGLAPACGPSYIRYI*SQDWQK
Trigger: TTTTTGCCAGTCTTGTGAGCAGATGTACCTGATGTA...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCCACATTCTGCTCATGTaGAGGGCTATGCATAAATTG +
Preference number: 4 (lower is better)
Translates to: QGEGRGANMRGLAPACGPHILLM*RAMHKL
Trigger: CAATTTATGCATAGCCCTGCACATGAGCAGAATGTG...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTTTTGCTGACATTCTCTaGGGAGAAGGCAAATACTGT +
Preference number: 4 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPFADIL*GEGKYC
Trigger: ACAGTATTTGCCTTCTCCCCAGAGAATGTCAGCAAA...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CCA 90 bp TCCCCAGCTGGGCACTGCCCTATTTTACATTCTCAGGCTGAGGGTGTGCAACCTCATTCACCCCACTGCTaGCCAGAGACGGGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: SPAGHCPILHSQAEGVQPHSPHC*PETGVG
Trigger: ACCGACACCCGTCTCTGGCCAGCAGTGGGGTGAATG...AGGTTGCACACCCTCAGCCTGAGAATGTAAAATAGGGCAGTGCCCAGCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGCAAACATGCGTGGGCTaGCACCTGCCTGCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGQTCVG*HLPAVP
Trigger: TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTG...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGAAGAAGAGCCCCAGGGTaGCATGCACACTCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRRRAPG*HAHSRG
Trigger: ACCCCTCGAGTGTGCATGCCACCCTGGGGCTCTTCT...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTGCTCCTCATCATCCATaGGAGTGGGGGTCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGAPHHP*EWGSGS
Trigger: GCTGCCCGACCCCCACTCCCATGGATGATGAGGAGC...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTCCTTGGATCTGGAGCTaGCCACTGGAGGTGGCACCC +
Preference number: 4 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGPWIWS*PLEVAP
Trigger: GGGTGCCACCTCCAGTGGCCAGCTCCAGATCCAAGG...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGTTGTTAAGTAGATGCTaGACTCATTGCCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLLLSRC*THCLPC
Trigger: ACATGGGAGGCAATGAGTCCAGCATCTACTTAACAA...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409489.5
CDS-3UTR TCA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGGCACGACACCAGCCATaGCACTTCTTGGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGARHQP*HFLAST
Trigger: GGTGCTGGCCAAGAAGTGTCATGGCTGGTGTCGTGC...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR TCA 90 bp CCAAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGCACGACACCAGCCATaGCACTTCTTGGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: PNLRSIYMSGVRAQGTTVARHQP*HFLAST
Trigger: GGTGCTGGCCAAGAAGTGTCATGGCTGGTGTCGTGC...CACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGCTGTTCAAATGTCCATaGCCTAATCCTTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGLFKCP*PNPSFQ
Trigger: CTGGAAGGAAGGATTAGGTCATGGACATTTGAACAG...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCAGCAAGGTATATATaGCTGCATCTATACATCATG +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGPARYI*LHLYIM
Trigger: CATGATGTATAGATGCAGTCATATATACCTTGCTGG...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCACATCAGCAGCAGCCTCTGCTAATGGGCATGTTGGGTGTGGCTTCTCCCGAATGTGTCAAGCAGGGTaGCAGAGCTACACACTGGGA +
Preference number: 4 (lower is better)
Translates to: ATSAAASANGHVGCGFSRMCQAG*QSYTLG
Trigger: TCCCAGTGTGTAGCTCTGTCACCCTGCTTGACACAT...TCGGGAGAAGCCACACCCAACATGCCCATTAGCAGAGGCTGCTGCTGATGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGACCAGCCATCCTCCGTaGAGTTCCGGCTCACCACTC +
Preference number: 4 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGTSHPP*SSGSPL
Trigger: GAGTGGTGAGCCGGAACTGCACGGAGGATGGCTGGT...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR GCA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTACCAGCCATCCTCCGTaGAGTTCCGGCTCACCACTC +
Preference number: 4 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGTSHPP*SSGSPL
Trigger: GAGTGGTGAGCCGGAACTGCACGGAGGATGGCTGGT...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR GCA 90 bp GCATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACAACCCGGACACCAAGATaGCAGGCGAGTGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ASCPSLYTHTHTHTHTHTTRTPR*QASARR
Trigger: CCTCCTGGCACTCGCCTGGCATCTTGGTGTCCGGGT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp CCCAGATTCGGGTGCAGGTGCTTCAGGATTCGCCGACATCAGAGGCAGGTGGCTTCCCCAGCTGGGCACTaGCCTATTTTACATTCTCAG +
Preference number: 4 (lower is better)
Translates to: PRFGCRCFRIRRHQRQVASPAGH*PILHSQ
Trigger: CTGAGAATGTAAAATAGGGCAGTGCCCAGCTGGGGA...AGCCACCTGCCTCTGATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAATTTGTTAAGTAGATaGTGGACTCATTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QGEGRGANMRGLAPACGPNLLSR*WTHCLP
Trigger: TGGGAGGCAATGAGTCCAGCATCTACTTAACAAATT...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409489.5
CDS-3UTR CCA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTGCCCCAATGTGTCTCTaGGCTGCTCACTGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRAAPMCL*AAHCGA
Trigger: GGCCCCGCAGTGAGCAGCCCAGAGACACATTGGGGC...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGAATCAGACTCTCCAATaGTTTCGGTCTCCCAGACTT +
Preference number: 4 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGNQTLQ*FRSPRL
Trigger: AAGTCTGGGAGACCGAAACCATTGGAGAGTCTGATT...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp CTCCATTGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCACCAGACATGCGGATTTaGGAGCTGCTCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LHCFSCKSPGQPSVTRAPPDMRI*ELLLLR
Trigger: CCTGAGCAAGAGCAGCTCCCAAATCCGCATGTCTGG...TGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GCCACATCAGCAGCAGCCTCTGCTAATGGGCATGTTGGGTGTGGCTTCTCCCGACACCAGCTTCCACTGTaGTGTCCAAATGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: ATSAAASANGHVGCGFSRHQLPL*CPNGRD
Trigger: GTCCCTTCCATTTGGACACCACAGTGGAAGCTGGTG...TCGGGAGAAGCCACACCCAACATGCCCATTAGCAGAGGCTGCTGCTGATGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp CTCCATTGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCAGTCATGATGAATGAATaGGGTCCATCCCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LHCFSCKSPGQPSVTRAPVMMNE*GPSPGG
Trigger: GCCCCCTGGGGATGGACCCCATTCATTCATCATGAC...TGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACAATTCCAGTCTGCCAGGAGCAAAGCGTaGAGAAGCCCAAGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GTTVGGTSTKTRRGQFQSARSKA*RSPSPC
Trigger: GCAAGGACTTGGGCTTCTCCACGCTTTGCTCCTGGC...AGACTGGAATTGTCCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCATTTATAAAACATACTaGATCCCACCATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QGEGRGANMRGLAPACGPIYKTY*IPPWWQ
Trigger: CTGCCACCATGGTGGGATCCAGTATGTTTTATAAAT...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGCCACTGGCCTCCCACTaGCAGCAGCGGCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: INGSSSSSKVCGAYLALLPLASH*QQRQVS
Trigger: GCTGACCTGCCGCTGCTGTCAGTGGGAGGCCAGTGG...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTCTCCACCAGCAGAGTaGAGAGGTACAGGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGSPPAE*RGTGPR
Trigger: TCGAGGGCCTGTACCTCTTCACTCTGCTGGTGGAGA...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR TCA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGAGACCTGACTGGAAGTaGGCAGGGACACTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGRPDWK*AGTLGQ
Trigger: TTGCCCCAGTGTCCCTGCTCACTTCCAGTCAGGTCT...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR TCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCCTGGGACCCAGGAGCTaGGCACCCGGACACCAAGAT +
Preference number: 4 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPLGPRS*APGHQD
Trigger: ATCTTGGTGTCCGGGTGCTCAGCTCCTGGGTCCCAG...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATCTGGGACCCAGGAGCTaGGCACCCGGACACCAAGAT +
Preference number: 4 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHLGPRS*APGHQD
Trigger: ATCTTGGTGTCCGGGTGCTCAGCTCCTGGGTCCCAG...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCACATCAGCAGCAGCCTCTGCTAATGGGCATGTTGGGTGTGGCTTCTCCCGAACTCCAAGATCAATCTaGGTCACCAAGCATGCCCAG +
Preference number: 4 (lower is better)
Translates to: ATSAAASANGHVGCGFSRTPRSI*VTKHAQ
Trigger: CTGGGCATGCTTGGTGACTCAGATTGATCTTGGAGT...TCGGGAGAAGCCACACCCAACATGCCCATTAGCAGAGGCTGCTGCTGATGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGAACAGGGGTGGAGTCTaGCAAGCCTGCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGNRGGV*QACFSP
Trigger: TGGGGAGAAGCAGGCTTGTCAGACTCCACCCCTGTT...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATGGCGGCGTGTGCGTGTaGGCACGCGGGGACCACGCT +
Preference number: 4 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHGGVCV*ARGDHA
Trigger: AGCGTGGTCCCCGCGTGCGCACACGCACACGCCGCC...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GGAGGGCTTAAGGGCTCTCTGTGGTGTGCATGGTTGGAGACAGCTTCTGGAAGGAAGTTGCGTGTGCAGTaGAGCTTCCGGAAGCGACAA +
Preference number: 4 (lower is better)
Translates to: GGLKGSLWCAWLETASGRKLRVQ*SFRKRQ
Trigger: TTGTCGCTTCCGGAAGCTGCACTGCACACGCAACTT...CCTTCCAGAAGCTGTCTCCAACCATGCACACCACAGAGAGCCCTTAAGCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp TCCCCAGCTGGGCACTGCCCTATTTTACATTCTCAGGCTGAGGGTGTGCAACCTAGAGACGGGTGTCGGTaGTTGAAGTCCACAGCGAAG +
Preference number: 4 (lower is better)
Translates to: SPAGHCPILHSQAEGVQPRDGCR*LKSTAK
Trigger: CTTCGCTGTGGACTTCAAGCACCGACACCCGTCTCT...AGGTTGCACACCCTCAGCCTGAGAATGTAAAATAGGGCAGTGCCCAGCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATGGATGGAGAGCTGGGTaGCCCCATTCACCCCACTGC +
Preference number: 4 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHGWRAG*PHSPHC
Trigger: GCAGTGGGGTGAATGGGGGCACCCAGCTCTCCATCC...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTCAGGGAGGCCAGACATaGGGATTTGGGAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGQGGQT*GFGSCS
Trigger: AGAGCAGCTCCCAAATCCGCATGTCTGGCCTCCCTG...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR GCA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTGAGTGCCAGGAGGCCTaGACCAAGGGGTGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRAECQEA*TKGCSG
Trigger: GCCAGAACACCCCTTGGTGCAGGCCTCCTGGCACTC...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGAGATCATGAGGTCAGGTaGAGGGTAGAAGGGCCACTG +
Preference number: 4 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRDHEVR*RVEGPL
Trigger: CAGTGGCCCTTCTACCCTGCACCTGACCTCATGATC...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCAAGGTATATATGACTaGATCTATACATCATGCCCA +
Preference number: 4 (lower is better)
Translates to: AQGEGRGANMRGLAPACGQGIYD*IYTSCP
Trigger: TGGGCATGATGTATAGATGCAGTCATATATACCTTG...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp CTCCATTGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCATCCCAGGGGCATGGCTaGTATCACCCATATGGAAGT +
Preference number: 4 (lower is better)
Translates to: LHCFSCKSPGQPSVTRAPSQGHG*YHPYGS
Trigger: ACTTCCATATGGGTGATAGCAGCCATGCCCCTGGGA...TGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp CTCCATTGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCAAGCCCATCAGCTCATTaGCCCTCTGGATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LHCFSCKSPGQPSVTRAPSPSAH*PSGSSP
Trigger: TGGAGAAGATCCAGAGGGCCAATGAGCTGATGGGCT...TGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGTTTGCTGACATTCTCTaGGGAGAAGGCAAATACTGT +
Preference number: 4 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGFADIL*GEGKYC
Trigger: ACAGTATTTGCCTTCTCCCCAGAGAATGTCAGCAAA...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACAATTCCAGTCTCCAGACATGCGGATTTaGGAGCTGCTCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GTTVGGTSTKTRRGQFQSPDMRI*ELLLLR
Trigger: CCTGAGCAAGAGCAGCTCCCAAATCCGCATGTCTGG...AGACTGGAATTGTCCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGAGGAGGAGGGGAGCATaGCTCAGGTGGCCAGATTGT +
Preference number: 4 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGRRRGA*LRWPDC
Trigger: ACAATCTGGCCACCTGAGCCATGCTCCCCTCCTCCT...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp CCAAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGCCCAGGGGACCACAGTaGGTGGGACCAGTACCAAAA +
Preference number: 4 (lower is better)
Translates to: PNLRSIYMSGVRAQGTTVPRGPQ*VGPVPK
Trigger: TTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGG...CACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTCCCAGGGGACCACAGTaGGTGGGACCAGTACCAAAA +
Preference number: 4 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGPRGPQ*VGPVPK
Trigger: TTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGG...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGAGAGTATTTACATGTCTaGGGTCAGGGCCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLREYLHV*GQGPGD
Trigger: GTCCCCTGGGCCCTGACCCCAGACATGTAAATACTC...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGCAAAGGGGGAAGGGATaGGACAACTTTTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGQRGKG*DNFSKF
Trigger: AAATTTGGAAAAGTTGTCCCATCCCTTCCCCCTTTG...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp TCCCCAGCTGGGCACTGCCCTATTTTACATTCTCAGGCTGAGGGTGTGCAACCTGATGAGAGAGGTGAGTaGGCATCCTTGGCGGGGATT +
Preference number: 4 (lower is better)
Translates to: SPAGHCPILHSQAEGVQPDERGE*ASLAGI
Trigger: AATCCCCGCCAAGGATGCCCACTCACCTCTCTCATC...AGGTTGCACACCCTCAGCCTGAGAATGTAAAATAGGGCAGTGCCCAGCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGAGATGAGAGAGGTGAGTaGGCATCCTTGGCGGGGATT +
Preference number: 4 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRDERGE*ASLAGI
Trigger: AATCCCCGCCAAGGATGCCCACTCACCTCTCTCATC...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACAATTCCAGTCTCTCCTGCAAGAGTCCTaGACAACCTTCGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: GTTVGGTSTKTRRGQFQSLLQES*TTFGHQ
Trigger: CTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAG...AGACTGGAATTGTCCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATAGAGCTCAGGGCAGCTaGCCAGGACCATCTCACCCA +
Preference number: 4 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHRAQGS*PGPSHP
Trigger: TGGGTGAGATGGTCCTGGTCAGCTGCCCTGAGCTCT...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TTGCCTCATCTCACAAATGGGAAAACTGGAGCCCAGAACAAGGAGCATCGTGTCAGAGCTCAGGGCAGCTaGCCAGGACCATCTCACCCA +
Preference number: 4 (lower is better)
Translates to: LPHLTNGKTGAQNKEHRVRAQGS*PGPSHP
Trigger: TGGGTGAGATGGTCCTGGTCAGCTGCCCTGAGCTCT...GACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGGGGTCCCCCAGCCAATaGTGGTGTACCAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGGSPSQ*WCTSRS
Trigger: ACTTCTACTGGTACACCATCATTGGCTGGGGGACCC...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR TCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGATTTACATTCTCAGGCTaGGGGTGTGCAACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRFTFSG*GCATCS
Trigger: GCTGCAGGTTGCACACCCTCAGCCTGAGAATGTAAA...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCACATCAGCAGCAGCCTCTGCTAATGGGCATGTTGGGTGTGGCTTCTCCCGACTGGCTGGACACTCATaGCAGGGAAAGAGAAATTTC +
Preference number: 4 (lower is better)
Translates to: ATSAAASANGHVGCGFSRLAGHS*QGKRNF
Trigger: GAAATTTCTCTTTCCCTGTCATGAGTGTCCAGCCAG...TCGGGAGAAGCCACACCCAACATGCCCATTAGCAGAGGCTGCTGCTGATGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATCAGGGCTCTTCTAGCTaGCTTCCATGGTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHQGSSS*LPWSLG
Trigger: GCCCAGGGACCATGGAAGTCAGCTAGAAGAGCCCTG...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACAATTCCAGTCTCCAGTCGCAAGTAGATaGTGGACTCATTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GTTVGGTSTKTRRGQFQSPVASR*WTHCLP
Trigger: TGGGAGGCAATGAGTCCAGCATCTACTTGCGACTGG...AGACTGGAATTGTCCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000409363.5
CDS-3UTR GCA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTTTGGGAGCTGCTCTTaGTCAGGATGGAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGFGSCS*SGWRAG
Trigger: CCCAGCTCTCCATCCTGAGCAAGAGCAGCTCCCAAA...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACAATTCCAGTCTTGCGGATTTGGGAGCTaGTCTTGCTCAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: GTTVGGTSTKTRRGQFQSCGFGS*SCSGWR
Trigger: TCTCCATCCTGAGCAAGAGCAGCTCCCAAATCCGCA...AGACTGGAATTGTCCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR GCA 90 bp CCAAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGGCTCTCTGTGGTGTaGATGGTTGGAGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: PNLRSIYMSGVRAQGTTVGLSVV*MVGDSF
Trigger: GAAGCTGTCTCCAACCATGCACACCACAGAGAGCCC...CACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp TTGCCTCATCTCACAAATGGGAAAACTGGAGCCCAGAACAAGGAGCATCGTGTCGTGGTAGGGAGCAGCTaGCACATCAGCAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LPHLTNGKTGAQNKEHRVVVGSS*HISSSL
Trigger: GAGGCTGCTGCTGATGTGGCAGCTGCTCCCTACCAC...GACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GGAATGGGCACACCAAAATGTCCCAGATCCTTGAAGTTGACTCCCAGGGGCATGGTGGAGATGAAGCAGTaGTTGCTGTCCTGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: GMGTPKCPRSLKLTPRGMVEMKQ*LLSCSA
Trigger: TGCGGAGCAGGACAGCAACCACTGCTTCATCTCCAC...CATGCCCCTGGGAGTCAACTTCAAGGATCTGGGACATTTTGGTGTGCCCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCCATTCACCCCACTGCTaGCCAGAGACGGGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPHSPHC*PETGVG
Trigger: ACCGACACCCGTCTCTGGCCAGCAGTGGGGTGAATG...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAATGCGGTCCCAGCCTGTaGATGGAGGAGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RHMGNESRSNKPGAKRGECGPSL*MEERRR
Trigger: CCTCCTCCTCTCCTCCATCCACAGGCTGGGACCGCA...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp CCAAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGAGTATTTACATGTCTaGGGTCAGGGCCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: PNLRSIYMSGVRAQGTTVEYLHV*GQGPGD
Trigger: GTCCCCTGGGCCCTGACCCCAGACATGTAAATACTC...CACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGGTAAAACAATGGAGATaGCGAAGGTTTTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGVKQWR*RRFSSM
Trigger: CATGGAAGAAAACCTTCGCCATCTCCATTGTTTTAC...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp CTCCATTGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCAGCTCCTTTCTTCCTCTaGCTTTGCCAAAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: LHCFSCKSPGQPSVTRAPAPFFL*LCQRSR
Trigger: CCTGGATCTTTGGCAAAGCCAGAGGAAGAAAGGAGC...TGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp CCAAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGTCCCTGCTCCCTGGCTaGACACTCATGACAGGGAAA +
Preference number: 4 (lower is better)
Translates to: PNLRSIYMSGVRAQGTTVSLLPG*TLMTGK
Trigger: TTTCCCTGTCATGAGTGTCCAGCCAGGGAGCAGGGA...CACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCTGCCTCCCTGCTCCCTaGCTGGACACTCATGACAGG +
Preference number: 4 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPCLPAP*LDTHDR
Trigger: CCTGTCATGAGTGTCCAGCCAGGGAGCAGGGAGGCA...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GGAGGGCTTAAGGGCTCTCTGTGGTGTGCATGGTTGGAGACAGCTTCTGGAAGGGTAGAGGGCCTTCACTaGCAGGTAGTAATAATCCTG +
Preference number: 4 (lower is better)
Translates to: GGLKGSLWCAWLETASGRVEGLH*QVVIIL
Trigger: CAGGATTATTACTACCTGTCAGTGAAGGCCCTCTAC...CCTTCCAGAAGCTGTCTCCAACCATGCACACCACAGAGAGCCCTTAAGCCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TTGCCTCATCTCACAAATGGGAAAACTGGAGCCCAGAACAAGGAGCATCGTGTCCAACCACAGGGCCTTTaGTCACCCACCACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LPHLTNGKTGAQNKEHRVQPQGL*SPTTEL
Trigger: CAGCTCTGTGGTGGGTGATCAAAGGCCCTGTGGTTG...GACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGATTCGCCATTTTCGCTTaGTCTCCGCTTGTACCTCAC +
Preference number: 4 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRFAIFA*SPLVPH
Trigger: GTGAGGTACAAGCGGAGATCAAGCGAAAATGGCGAA...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTCCCAGCAGCCCATGGTaGGTCAAGGTCAAGGGCATA +
Preference number: 4 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRAPSSPW*VKVKGI
Trigger: TATGCCCTTGACCTTGACTCACCATGGGCTGCTGGG...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCAATTCTGTGTCCATCTaGGCCCTCTGGCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPNSVSI*ALWPPP
Trigger: AGGGGGAGGCCAGAGGGCTCAGATGGACACAGAATT...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACGGGTCCGTGTGTCCCTaGGCGGCGGCGTGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNGSVCP*AAACAC
Trigger: ACACGCACACGCCGCCGCGCAGGGACACACGGACCC...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTCCAGTCGCAAGTAGATaGTGGACTCATTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGPVASR*WTHCLP
Trigger: TGGGAGGCAATGAGTCCAGCATCTACTTGCGACTGG...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000409363.5
CDS-3UTR GCA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATCAGGGAGGCCAGACATaGGGATTTGGGAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHQGGQT*GFGSCS
Trigger: AGAGCAGCTCCCAAATCCGCATGTCTGGCCTCCCTG...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GGAATGGGCACACCAAAATGTCCCAGATCCTTGAAGTTGACTCCCAGGGGCATGAGAGCCCCACTCCTGTaGAAGGTTACATGCGTACTG +
Preference number: 4 (lower is better)
Translates to: GMGTPKCPRSLKLTPRGMRAPLL*KVTCVL
Trigger: CAGTACGCATGTAACCTTGCACAGGAGTGGGGCTCT...CATGCCCCTGGGAGTCAACTTCAAGGATCTGGGACATTTTGGTGTGCCCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATAGCCTGTGTGGCCGGCTaGCGGCCGGGGTCCGTGTGT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTYIHQNLIACVAG*RPGSVC
Trigger: ACACACGGACCCCGGCCGCCAGCCGGCCACACAGGC...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGAGCCCATCAGCTCATTaGCCCTCTGGATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGSPSAH*PSGSSP
Trigger: TGGAGAAGATCCAGAGGGCCAATGAGCTGATGGGCT...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp CCAAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGTGTCACACACACAGTTaGGGTCCCCCAGCCAATGAT +
Preference number: 4 (lower is better)
Translates to: PNLRSIYMSGVRAQGTTVCHTHS*GPPAND
Trigger: ATCATTGGCTGGGGGACCCCAACTGTGTGTGTGACA...CACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp CCCAGATTCGGGTGCAGGTGCTTCAGGATTCGCCGACATCAGAGGCAGGTGGCTTTTGCTGACATTCTCTaGGGAGAAGGCAAATACTGT +
Preference number: 4 (lower is better)
Translates to: PRFGCRCFRIRRHQRQVAFADIL*GEGKYC
Trigger: ACAGTATTTGCCTTCTCCCCAGAGAATGTCAGCAAA...AGCCACCTGCCTCTGATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTACAAGGCCTCACAGCTaGGGTCAGGCCATCACTGAG +
Preference number: 4 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRATRPHS*GQAITE
Trigger: CTCAGTGATGGCCTGACCCCAGCTGTGAGGCCTTGT...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGATCTCTGTGGTGTGCATaGTTGGAGACAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRSLWCA*LETASG
Trigger: TCCAGAAGCTGTCTCCAACCATGCACACCACAGAGA...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTCAGAGGCAGGTGGCTaGTACATCCTAGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGSEAGG*YILVMA
Trigger: AGCCATGACTAGGATGTACCAGCCACCTGCCTCTGA...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CAA 72 bp GGAATGGGCACACCAAAATGTCCCAGATCCTTGAAGTaGACTCCCAGGGGCATGGCTGCTATCACCCATATG +
Preference number: 4 (lower is better)
Translates to: GMGTPKCPRSLK*TPRGMAAITHM
Trigger: CATATGGGTGATAGCAGCCATGCCCCTGGGAGTCAACTTCAAGGATCTGGGACATTTTGGTGTGCCCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTATTCCACAGTGGAGATaGAGCAGTGGTTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGIPQWR*SSGCCP
Trigger: AGGACAGCAACCACTGCTTCATCTCCACTGTGGAAT...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR TCA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAATCTCCACCAGCAGAGTaGAGAGGTACAGGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: RHMGNESRSNKPGAKRGESPPAE*RGTGPR
Trigger: TCGAGGGCCTGTACCTCTTCACTCTGCTGGTGGAGA...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTGGGTCCCCCAGCCAATaGTGGTGTACCAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRAGSPSQ*WCTSRS
Trigger: ACTTCTACTGGTACACCATCATTGGCTGGGGGACCC...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CCCAGATTCGGGTGCAGGTGCTTCAGGATTCGCCGACATCAGAGGCAGGTGGCTCCAGCAAGGTATATATaGCTGCATCTATACATCATG +
Preference number: 4 (lower is better)
Translates to: PRFGCRCFRIRRHQRQVAPARYI*LHLYIM
Trigger: CATGATGTATAGATGCAGTCATATATACCTTGCTGG...AGCCACCTGCCTCTGATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CCAAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGCCCTTCCACAAAGAGTaGGGATCAGATGAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: PNLRSIYMSGVRAQGTTVPFHKE*GSDERG
Trigger: ACCTCTCTCATCTGATCCTCACTCTTTGTGGAAGGG...CACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGAAATGGTGGACAGTTCTaGCATCTTGCAAGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRNGGQF*HLARVL
Trigger: CAGCACTCTTGCAAGATGTCAGAACTGTCCACCATT...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614107.4
CDS-3UTR GCA 90 bp TGGTGTTTAGACAGAGTTCCAGAGATGCATTGGGCTATATACAAATCATCTAGTGGGTCCGTGTGTCCCTaGGCGGCGGCGTGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: WCLDRVPEMHWAIYKSSSGSVCP*AAACAC
Trigger: ACACGCACACGCCGCCGCGCAGGGACACACGGACCC...ACTAGATGATTTGTATATAGCCCAATGCATCTCTGGAACTCTGTCTAAACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp CCAAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGTCCAGGCACATGGCTTaGTCCTTCTTGAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: PNLRSIYMSGVRAQGTTVSRHMA*SFLKMQ
Trigger: CTGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGA...CACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR GCA 90 bp TTGCCTCATCTCACAAATGGGAAAACTGGAGCCCAGAACAAGGAGCATCGTGTCTTTGGGAGCTGCTCTTaGTCAGGATGGAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPHLTNGKTGAQNKEHRVFGSCS*SGWRAG
Trigger: CCCAGCTCTCCATCCTGAGCAAGAGCAGCTCCCAAA...GACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GGAATGGGCACACCAAAATGTCCCAGATCCTTGAAGTTGACTCCCAGGGGCATGTGTCCACAGGACCCTTaGTTCAGTAATGCACACCAG +
Preference number: 4 (lower is better)
Translates to: GMGTPKCPRSLKLTPRGMCPQDP*FSNAHQ
Trigger: CTGGTGTGCATTACTGAAGCAAGGGTCCTGTGGACA...CATGCCCCTGGGAGTCAACTTCAAGGATCTGGGACATTTTGGTGTGCCCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTGGCGGGGATTATAGATaGAGGTGTCTCTCAAGCCTA +
Preference number: 4 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGGGDYR*RCLSSL
Trigger: TAGGCTTGAGAGACACCTGCATCTATAATCCCCGCC...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GCATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACAAGAAGCCCAAGTCCTTaGTCCTTGCTCAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: ASCPSLYTHTHTHTHTHTRSPSP*SLLRAL
Trigger: AAGAGCCCTGAGCAAGGAGCAAGGACTTGGGCTTCT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACAATTCCAGTCTTTGAGTGTCACATTCTaGTCATGTGCAGGGCTATGC +
Preference number: 4 (lower is better)
Translates to: GTTVGGTSTKTRRGQFQSLSVTF*SCAGLC
Trigger: GCATAGCCCTGCACATGAGCAGAATGTGACACTCAA...AGACTGGAATTGTCCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp CCAAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGTCGCAAGTAGATGCTaGACTCATTGCCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: PNLRSIYMSGVRAQGTTVVASRC*THCLPC
Trigger: ACATGGGAGGCAATGAGTCCAGCATCTACTTGCGAC...CACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000409363.5
CDS-3UTR CCA 90 bp TTGCCTCATCTCACAAATGGGAAAACTGGAGCCCAGAACAAGGAGCATCGTGTCGGGGACCACAGTGGGTaGGACCAGTACCAAAACAAG +
Preference number: 4 (lower is better)
Translates to: LPHLTNGKTGAQNKEHRVGDHSG*DQYQNK
Trigger: CTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCC...GACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp CCAAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGTCTCTGTGGTGTGCATaGTTGGAGACAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PNLRSIYMSGVRAQGTTVSLWCA*LETASG
Trigger: TCCAGAAGCTGTCTCCAACCATGCACACCACAGAGA...CACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTGTCATGATGAATGAATaGGGTCCATCCCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRAVMMNE*GPSPGG
Trigger: GCCCCCTGGGGATGGACCCCATTCATTCATCATGAC...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTGACTTCCATGGTCCCTaGGCTCAAGGAGGACTTTAT +
Preference number: 4 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGDFHGP*AQGGLY
Trigger: ATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTC...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTAAAGAAGGTAAGCCCTaGATCACAGAGCAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGKEGKP*ITEQVA
Trigger: AGCCACCTGCTCTGTGATCCAGGGCTTACCTTCTTT...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GGAATGGGCACACCAAAATGTCCCAGATCCTTGAAGTTGACTCCCAGGGGCATGAGAGATTTCAATAGTTaGGTCCAGGCCAGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GMGTPKCPRSLKLTPRGMRDFNS*VQARGA
Trigger: AGCTCCTCTGGCCTGGACTCAACTATTGAAATCTCT...CATGCCCCTGGGAGTCAACTTCAAGGATCTGGGACATTTTGGTGTGCCCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCATGTGTCAAGCAGGGTaGCAGAGCTACACACTGGGA +
Preference number: 4 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPMCQAG*QSYTLG
Trigger: TCCCAGTGTGTAGCTCTGTCACCCTGCTTGACACAT...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GGAGGGCTTAAGGGCTCTCTGTGGTGTGCATGGTTGGAGACAGCTTCTGGAAGGGAAGTATCCTCACTCTaGTCCCAACAGAAAACTGAA +
Preference number: 4 (lower is better)
Translates to: GGLKGSLWCAWLETASGREVSSL*SQQKTE
Trigger: TTCAGTTTTCTGTTGGGATCAGAGTGAGGATACTTC...CCTTCCAGAAGCTGTCTCCAACCATGCACACCACAGAGAGCCCTTAAGCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACAATTCCAGTCTAACACCCCAAGACTGTaGGTTCAGGAAAAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: GTTVGGTSTKTRRGQFQSNTPRL*VQEKKE
Trigger: TTCCTTCTTTTCCTGAACTCACAGTCTTGGGGTGTT...AGACTGGAATTGTCCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GCCACATCAGCAGCAGCCTCTGCTAATGGGCATGTTGGGTGTGGCTTCTCCCGATGGCAAAACATTTATTaGGTCATCTACAGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: ATSAAASANGHVGCGFSRWQNIY*VIYSSL
Trigger: CAGACTGCTGTAGATGACTCAATAAATGTTTTGCCA...TCGGGAGAAGCCACACCCAACATGCCCATTAGCAGAGGCTGCTGCTGATGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGGCAGCCAGGGAAACGTaGACGACACCAGCCATGACA +
Preference number: 4 (lower is better)
Translates to: INGSSSSSKVCGAYLALLAARET*TTPAMT
Trigger: TGTCATGGCTGGTGTCGTGCACGTTTCCCTGGCTGC...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATAGATTCGGGTGCAGGTaGTTCAGGATTCGCCGACAT +
Preference number: 4 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHRFGCR*FRIRRH
Trigger: ATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCT...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATACTGACACTGCCTCCCTaGTCCCTGGCTGGACACTCA +
Preference number: 4 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLILTLPP*SLAGHS
Trigger: TGAGTGTCCAGCCAGGGAGCAGGGAGGCAGTGTCAG...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp TTGCCTCATCTCACAAATGGGAAAACTGGAGCCCAGAACAAGGAGCATCGTGTCTCCCAGGGGCATGGCTaGTATCACCCATATGGAAGT +
Preference number: 4 (lower is better)
Translates to: LPHLTNGKTGAQNKEHRVSQGHG*YHPYGS
Trigger: ACTTCCATATGGGTGATAGCAGCCATGCCCCTGGGA...GACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCTCGGTCTCCCAGACTTaGTCTGGGTTGAAGATTCGG +
Preference number: 4 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPSVSQT*SGLKIR
Trigger: CCGAATCTTCAACCCAGACCAAGTCTGGGAGACCGA...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTATTGCCTCCCATGTCTaGAGACTGAAGTTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGIASHV*RLKFLH
Trigger: GTGCAGAAACTTCAGTCTCCAGACATGGGAGGCAAT...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACGCCACCACAAAGCCCTaGAAGGAGCCCAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNATTKP*KEPSPS
Trigger: GCTGGGGCTGGGCTCCTTCCAGGGCTTTGTGGTGGC...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAAGGGGACCACAGTGGGTaGGACCAGTACCAAAACAAG +
Preference number: 4 (lower is better)
Translates to: RHMGNESRSNKPGAKRGEGDHSG*DQYQNK
Trigger: CTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCC...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGAGTGAGCAGGGACACTaGGGCAAAGGGGGAAGGGAT +
Preference number: 4 (lower is better)
Translates to: INGSSSSSKVCGAYLALLSEQGH*GKGGRD
Trigger: ATCCCTTCCCCCTTTGCCCCAGTGTCCCTGCTCACT...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp TCCCCAGCTGGGCACTGCCCTATTTTACATTCTCAGGCTGAGGGTGTGCAACCTGCTCTCAGCTCCTTTTaGATCAAACGAAAAGCACCA +
Preference number: 4 (lower is better)
Translates to: SPAGHCPILHSQAEGVQPALSSF*IKRKAP
Trigger: TGGTGCTTTTCGTTTGATCCAAAAGGAGCTGAGAGC...AGGTTGCACACCCTCAGCCTGAGAATGTAAAATAGGGCAGTGCCCAGCTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp TTGCCTCATCTCACAAATGGGAAAACTGGAGCCCAGAACAAGGAGCATCGTGTCTGTGGTGTGCATGGTTaGAGACAGCTTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LPHLTNGKTGAQNKEHRVCGVHG*RQLLEG
Trigger: GCCTTCCAGAAGCTGTCTCCAACCATGCACACCACA...GACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp CCAAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGCACCAAATGCTGACATaGAATGAGCTAGGCCACACA +
Preference number: 4 (lower is better)
Translates to: PNLRSIYMSGVRAQGTTVHQMLT*NELGHT
Trigger: TGTGTGGCCTAGCTCATTCCATGTCAGCATTTGGTG...CACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGCACAAATGGGAAAACTaGAGCCCAGAACAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGHKWEN*SPEQGA
Trigger: TGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTG...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTGGCCTAGAGAAGCATTaGAAGTTGCCTCATCTCACA +
Preference number: 4 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGGLEKH*KLPHLT
Trigger: TGTGAGATGAGGCAACTTCCAATGCTTCTCTAGGCC...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTAAGCAGCACAGTGCATaGGGTTCAGGGTTGATTTTG +
Preference number: 4 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGKQHSA*GSGLIL
Trigger: CAAAATCAACCCTGAACCCCATGCACTGTGCTGCTT...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGATTTCTTATCCTTTCCTaGCCCAGGCAAATACCACAG +
Preference number: 4 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRFLILS*PRQIPQ
Trigger: CTGTGGTATTTGCCTGGGCCAGGAAAGGATAAGAAA...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CAA 72 bp AAAGAAGGAATGGGCACACCAAAATGTCCCAGATCCTaGAAGTTGACTCCCAGGGGCATGGCTGCTATCACC +
Preference number: 4 (lower is better)
Translates to: KEGMGTPKCPRS*KLTPRGMAAIT
Trigger: GGTGATAGCAGCCATGCCCCTGGGAGTCAACTTCAAGGATCTGGGACATTTTGGTGTGCCCATTCCTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TTGCCTCATCTCACAAATGGGAAAACTGGAGCCCAGAACAAGGAGCATCGTGTCCTGGAGAGGAATCATTaGAGCCCATCAGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: LPHLTNGKTGAQNKEHRVLERNH*SPSAHW
Trigger: CCAATGAGCTGATGGGCTTCAATGATTCCTCTCCAG...GACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATATTCCACAGTGGAGATaGAGCAGTGGTTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHIPQWR*SSGCCP
Trigger: AGGACAGCAACCACTGCTTCATCTCCACTGTGGAAT...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATCCCATGTCTGGAGACTaGAGTTTCTGCACAAGGATG +
Preference number: 4 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHPMSGD*SFCTRM
Trigger: CATCCTTGTGCAGAAACTTCAGTCTCCAGACATGGG...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATAAGACCTGACTGGAAGTaGGCAGGGACACTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLIRPDWK*AGTLGQ
Trigger: TTGCCCCAGTGTCCCTGCTCACTTCCAGTCAGGTCT...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGGAGGTGGAAGGGAGATaGCCAGAAGAACCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: INGSSSSSKVCGAYLALLEVEGR*PEEPCP
Trigger: TGGACAGGGTTCTTCTGGTCATCTCCCTTCCACCTC...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGCCATTTCCTCCAGGATaGGAGTCCCTCCCTGACACT +
Preference number: 4 (lower is better)
Translates to: INGSSSSSKVCGAYLALLPFPPG*ESLPDT
Trigger: AGTGTCAGGGAGGGACTCTCATCCTGGAGGAAATGG...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACCCCCATTCACCCCACTaGTGGCCAGAGACGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNPHSPH*WPETGV
Trigger: GACACCCGTCTCTGGCCAGCAGTGGGGTGAATGGGG...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACGAGTGCCAGGAGGCCTaGACCAAGGGGTGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNECQEA*TKGCSG
Trigger: GCCAGAACACCCCTTGGTGCAGGCCTCCTGGCACTC...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GCCACATCAGCAGCAGCCTCTGCTAATGGGCATGTTGGGTGTGGCTTCTCCCGAATCATGAAACAAGTCTaGAAACAGAATTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: ATSAAASANGHVGCGFSRIMKQV*KQNLDR
Trigger: CCTGTCCAAATTCTGTTTGCAGACTTGTTTCATGAT...TCGGGAGAAGCCACACCCAACATGCCCATTAGCAGAGGCTGCTGCTGATGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACAATTCCAGTCTAGAAGCATTGGAAGTTaGCTCATCTCACAAATGGGA +
Preference number: 4 (lower is better)
Translates to: GTTVGGTSTKTRRGQFQSRSIGS*LISQMG
Trigger: TCCCATTTGTGAGATGAGGCAACTTCCAATGCTTCT...AGACTGGAATTGTCCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATGGCGGGGATTATAGATaGAGGTGTCTCTCAAGCCTA +
Preference number: 4 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHGGDYR*RCLSSL
Trigger: TAGGCTTGAGAGACACCTGCATCTATAATCCCCGCC...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCCTCCATTGCTTCTCCTaGAAGAGTCCTGGACAACCT +
Preference number: 4 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPLHCFS*KSPGQP
Trigger: AGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCACAGTTCTGACATCTTaGAAGAGTGCTGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPTVLTS*KSAAEP
Trigger: GGGCTCAGCAGCACTCTTGCAAGATGTCAGAACTGT...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614107.4
CDS-3UTR CCA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTCTCCCAGACTTGGTCTaGGTTGAAGATTCGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRALPDLV*VEDSEE
Trigger: CTCTTCCGAATCTTCAACCCAGACCAAGTCTGGGAG...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCGTCGCAAGTAGATGCTaGACTCATTGCCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPVASRC*THCLPC
Trigger: ACATGGGAGGCAATGAGTCCAGCATCTACTTGCGAC...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304166.9
CDS-3UTR CCA 90 bp TGGTGTTTAGACAGAGTTCCAGAGATGCATTGGGCTATATACAAATCATCTAGTCACCAAGGGGTGTTCTaGCCACCCGAGCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: WCLDRVPEMHWAIYKSSSHQGVF*PPELAL
Trigger: GAGGGCCAGCTCGGGTGGCCAGAACACCCCTTGGTG...ACTAGATGATTTGTATATAGCCCAATGCATCTCTGGAACTCTGTCTAAACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAATCAGAGGCAGGTGGCTaGTACATCCTAGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: RHMGNESRSNKPGAKRGESEAGG*YILVMA
Trigger: AGCCATGACTAGGATGTACCAGCCACCTGCCTCTGA...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp CCAAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGCCCATTCCAAGTAGATaGCTGGTGTTTAGACAGAGT +
Preference number: 4 (lower is better)
Translates to: PNLRSIYMSGVRAQGTTVPIPSR*LVFRQS
Trigger: ACTCTGTCTAAACACCAGCCATCTACTTGGAATGGG...CACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GCATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATCAGCATCCTTGACTTaGAATCCCATTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ASCPSLYTHTHTHTHTHTSASLT*NPISSR
Trigger: CCTGGAGGAAATGGGATTCCAAGTCAAGGATGCTGA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACAATTCCAGTCTCTCCTCAAAGACATATaGGGAATGAGTCAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: GTTVGGTSTKTRRGQFQSLLKDI*GMSQGQ
Trigger: TTGACCTTGACTCATTCCCCATATGTCTTTGAGGAG...AGACTGGAATTGTCCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp CTCCATTGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCAATTTATAAAACATACTaGATCCCACCATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LHCFSCKSPGQPSVTRAPIYKTY*IPPWWQ
Trigger: CTGCCACCATGGTGGGATCCAGTATGTTTTATAAAT...TGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGCTGCTGAGCCCGCTGTaGCTTGCAGTAGCATTTCTG +
Preference number: 4 (lower is better)
Translates to: INGSSSSSKVCGAYLALLLLSPL*LAVAFL
Trigger: CAGAAATGCTACTGCAAGCCACAGCGGGCTCAGCAG...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614107.4
3UTR CAA 72 bp CGCAATCACAGCCACATTTCTGGCTCTCAGCTCCTTTaGGATCAAACGAAAAGCACCAGAACCTTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: RNHSHISGSQLL*DQTKSTRTFPD
Trigger: GTCAGGGAAGGTTCTGGTGCTTTTCGTTTGATCCAAAAGGAGCTGAGAGCCAGAAATGTGGCTGTGATTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CAA 72 bp ATCACTTACGTGCAGGGCCTAGAGAAGCATTGGAAGTaGCCTCATCTCACAAATGGGAAAACTGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: ITYVQGLEKHWK*PHLTNGKTGAQ
Trigger: CTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAACTTCCAATGCTTCTCTAGGCCCTGCACGTAAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CAA 72 bp TTAAAAAGTAGGTCTCCCCACACCACACTGACTCCATaGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGT +
Preference number: 4 (lower is better)
Translates to: LKSRSPHTTLTP*LLLQESWTTFG
Trigger: ACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAGTCAGTGTGGTGTGGGGAGACCTACTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATCGGGCTTCCAACACGTaGTGTTGTCCCACATCCCAG +
Preference number: 4 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHRASNT*CCPTSQ
Trigger: CTGGGATGTGGGACAACATCACGTGTTGGAAGCCCG...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTAGTGGAAGAAAACCATaGCGGCCTTACATTCCACAG +
Preference number: 4 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRASGRKP*RPYIPQ
Trigger: CTGTGGAATGTAAGGCCGTCATGGTTTTCTTCCACT...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAATTCGCCATTTTCGCTTaGTCTCCGCTTGTACCTCAC +
Preference number: 4 (lower is better)
Translates to: RHMGNESRSNKPGAKRGEFAIFA*SPLVPH
Trigger: GTGAGGTACAAGCGGAGATCAAGCGAAAATGGCGAA...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TGGTGTTTAGACAGAGTTCCAGAGATGCATTGGGCTATATACAAATCATCTAGTCACCAGAACCTTCCCTaGCCTGCAGACTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: WCLDRVPEMHWAIYKSSSHQNLP*PADSPP
Trigger: GGGTGGGGAGTCTGCAGGTCAGGGAAGGTTCTGGTG...ACTAGATGATTTGTATATAGCCCAATGCATCTCTGGAACTCTGTCTAAACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GGAATGGGCACACCAAAATGTCCCAGATCCTTGAAGTTGACTCCCAGGGGCATGTCCAGAGCATCATCATaGAACAAGTCTGCAAACAGA +
Preference number: 4 (lower is better)
Translates to: GMGTPKCPRSLKLTPRGMSRASS*NKSANR
Trigger: TCTGTTTGCAGACTTGTTTCATGATGATGCTCTGGA...CATGCCCCTGGGAGTCAACTTCAAGGATCTGGGACATTTTGGTGTGCCCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATGCAGCCAGGGAAACGTaGACGACACCAGCCATGACA +
Preference number: 4 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHAARET*TTPAMT
Trigger: TGTCATGGCTGGTGTCGTGCACGTTTCCCTGGCTGC...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATAAGAGACGGGTGTCGGTaGTTGAAGTCCACAGCGAAG +
Preference number: 4 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLIRDGCR*LKSTAK
Trigger: CTTCGCTGTGGACTTCAAGCACCGACACCCGTCTCT...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGAGATTCGGGTGCAGGTaGTTCAGGATTCGCCGACAT +
Preference number: 4 (lower is better)
Translates to: INGSSSSSKVCGAYLALLRFGCR*FRIRRH
Trigger: ATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCT...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTTGCATCTATACATCATaGCCAAGGCACCTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGCIYTS*PRHLFK
Trigger: TTTGAACAGGTGCCTTGGGCATGATGTATAGATGCA...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAAGGGAGTCATGAAGTCTaGAGTGCTAGGAACTACCAC +
Preference number: 4 (lower is better)
Translates to: RHMGNESRSNKPGAKRGEGSHEV*SARNYH
Trigger: GTGGTAGTTCCTAGCACTGCAGACTTCATGACTCCC...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCTTGAGTGTCACATTCTaGTCATGTGCAGGGCTATGC +
Preference number: 4 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPLSVTF*SCAGLC
Trigger: GCATAGCCCTGCACATGAGCAGAATGTGACACTCAA...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTACACACATAGCCAAGTaGAGAAACACCCCAAGACTG +
Preference number: 4 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRATHIAK*RNTPRL
Trigger: CAGTCTTGGGGTGTTTCTGCACTTGGCTATGTGTGT...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGTCGGTCTCCCAGACTTaGTCTGGGTTGAAGATTCGG +
Preference number: 4 (lower is better)
Translates to: INGSSSSSKVCGAYLALLSVSQT*SGLKIR
Trigger: CCGAATCTTCAACCCAGACCAAGTCTGGGAGACCGA...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATGGAGCATGGCTCAGGTaGCCAGATTGTCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHGAWLR*PDCQQG
Trigger: TCCCTGCTGACAATCTGGCCACCTGAGCCATGCTCC...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATACAAACATGCGTGGGCTaGCACCTGCCTGCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTYIHQNLIQTCVG*HLPAVP
Trigger: TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTG...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGAGTAAAACAATGGAGATaGCGAAGGTTTTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRVKQWR*RRFSSM
Trigger: CATGGAAGAAAACCTTCGCCATCTCCATTGTTTTAC...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp TTGCCTCATCTCACAAATGGGAAAACTGGAGCCCAGAACAAGGAGCATCGTGTCGGCCTAGAGAAGCATTaGAAGTTGCCTCATCTCACA +
Preference number: 4 (lower is better)
Translates to: LPHLTNGKTGAQNKEHRVGLEKH*KLPHLT
Trigger: TGTGAGATGAGGCAACTTCCAATGCTTCTCTAGGCC...GACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp CCAAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGATCTGCTCACAAGACTaGCAAAAATTCACTCAGACG +
Preference number: 4 (lower is better)
Translates to: PNLRSIYMSGVRAQGTTVICSQD*QKFTQT
Trigger: CGTCTGAGTGAATTTTTGCCAGTCTTGTGAGCAGAT...CACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCTCAGCATCCTTGACTTaGAATCCCATTTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPSASLT*NPISSR
Trigger: CCTGGAGGAAATGGGATTCCAAGTCAAGGATGCTGA...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAAGACTTCCATGGTCCCTaGGCTCAAGGAGGACTTTAT +
Preference number: 4 (lower is better)
Translates to: RHMGNESRSNKPGAKRGEDFHGP*AQGGLY
Trigger: ATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTC...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATACTCCTGCAAGAGTCCTaGACAACCTTCGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLILLQES*TTFGHQ
Trigger: CTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAG...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACCGGGCTTCCAACACGTaGTGTTGTCCCACATCCCAG +
Preference number: 4 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNRASNT*CCPTSQ
Trigger: CTGGGATGTGGGACAACATCACGTGTTGGAAGCCCG...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACAACAGGGGTGGAGTCTaGCAAGCCTGCTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNNRGGV*QACFSP
Trigger: TGGGGAGAAGCAGGCTTGTCAGACTCCACCCCTGTT...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TTGCCTCATCTCACAAATGGGAAAACTGGAGCCCAGAACAAGGAGCATCGTGTCAAGACATATGGGGAATaGGTCAAGGTCAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: LPHLTNGKTGAQNKEHRVKTYGE*VKVKQA
Trigger: GGCTTGTTTGACCTTGACTCATTCCCCATATGTCTT...GACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATGGGCTCTCTGTGGTGTaGATGGTTGGAGACAGCTTC +
Preference number: 4 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHGLSVV*MVGDSF
Trigger: GAAGCTGTCTCCAACCATGCACACCACAGAGAGCCC...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTACATCAGGTACATCTaGTCACAAGACTGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGYIRYI*SQDWQK
Trigger: TTTTTGCCAGTCTTGTGAGCAGATGTACCTGATGTA...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATACTGACACTGCCTCCCTaGTCCCTGGCTGGACACTCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTYIHQNLILTLPP*SLAGHS
Trigger: TGAGTGTCCAGCCAGGGAGCAGGGAGGCAGTGTCAG...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATAGGTTACATGCGTACTaGATGGATGCTTTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHRLHAY*MDALSV
Trigger: GACACTCAAAGCATCCATGCAGTACGCATGTAACCT...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCACAGCCAGAAGTAGTTaGACACAACACAGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPTARSS*TQHSSG
Trigger: TCCACTACTGTGTTGTGTCCAACTACTTCTGGCTGT...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTGCTCTCAGCTCCTTTTaGATCAAACGAAAAGCACCA +
Preference number: 4 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRAALSSF*IKRKAP
Trigger: TGGTGCTTTTCGTTTGATCCAAAAGGAGCTGAGAGC...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGATCTGCAAACAGAATTTaGACAGGAGTAACACCAAAT +
Preference number: 4 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRSANRI*TGVTPN
Trigger: ATTTGGTGTTACTCCTGTCCAAATTCTGTTTGCAGA...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACAATTCCAGTCTTCTGCAAACAGAATTTaGACAGGAGTAACACCAAAT +
Preference number: 4 (lower is better)
Translates to: GTTVGGTSTKTRRGQFQSSANRI*TGVTPN
Trigger: ATTTGGTGTTACTCCTGTCCAAATTCTGTTTGCAGA...AGACTGGAATTGTCCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTATCTGGAGCTGGCCACTaGAGGTGGCACCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLSGAGH*RWHPTP
Trigger: TGGGGTGGGGTGCCACCTCCAGTGGCCAGCTCCAGA...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCCCCATTCCAAGTAGATaGCTGGTGTTTAGACAGAGT +
Preference number: 4 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPPIPSR*LVFRQS
Trigger: ACTCTGTCTAAACACCAGCCATCTACTTGGAATGGG...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
48% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp TTGCCTCATCTCACAAATGGGAAAACTGGAGCCCAGAACAAGGAGCATCGTGTCCAGGAAAAGAAGGAATaGGCACACCAAAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: LPHLTNGKTGAQNKEHRVQEKKE*AHQNVP
Trigger: TGGGACATTTTGGTGTGCCCATTCCTTCTTTTCCTG...GACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATTACTTAGCTTTACTGTaGGAGATGAAACCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHYLALL*EMKPRL
Trigger: CAGCCTGGGTTTCATCTCCCACAGTAAAGCTAAGTA...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATACTGGAGAGGAATCATTaGAGCCCATCAGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLILERNH*SPSAHW
Trigger: CCAATGAGCTGATGGGCTTCAATGATTCCTCTCCAG...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACGGGTCCCCCAGCCAATaGTGGTGTACCAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNGSPSQ*WCTSRS
Trigger: ACTTCTACTGGTACACCATCATTGGCTGGGGGACCC...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATACCCATGTCTGGAGACTaGAGTTTCTGCACAAGGATG +
Preference number: 4 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLIPMSGD*SFCTRM
Trigger: CATCCTTGTGCAGAAACTTCAGTCTCCAGACATGGG...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACCCATTTCCTCCAGGATaGGAGTCCCTCCCTGACACT +
Preference number: 4 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNPFPPG*ESLPDT
Trigger: AGTGTCAGGGAGGGACTCTCATCCTGGAGGAAATGG...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTCTATGCATAAATTGGTaGGCCATTTACTCATTCAGA +
Preference number: 4 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGLCINW*AIYSFR
Trigger: TCTGAATGAGTAAATGGCTCACCAATTTATGCATAG...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CCAAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGCTATGCATAAATTGGTaGGCCATTTACTCATTCAGA +
Preference number: 4 (lower is better)
Translates to: PNLRSIYMSGVRAQGTTVLCINW*AIYSFR
Trigger: TCTGAATGAGTAAATGGCTCACCAATTTATGCATAG...CACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATACCTCCCCCTTACTCCTaGTGCTGGTGGTTTTACAAA +
Preference number: 4 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLIPPPYS*CWWFYK
Trigger: TTTGTAAAACCACCAGCATCAGGAGTAAGGGGGAGG...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATAAATTCTGTGTCCATCTaGGCCCTCTGGCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTYIHQNLINSVSI*ALWPPP
Trigger: AGGGGGAGGCCAGAGGGCTCAGATGGACACAGAATT...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTAACCCGGACACCAAGATaGCAGGCGAGTGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLTRTPR*QASARR
Trigger: CCTCCTGGCACTCGCCTGGCATCTTGGTGTCCGGGT...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTAGGCACAATGATGAATaGCCTTTTACCTGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRARHNDE*PFTCLD
Trigger: GTCAAGACAGGTAAAAGGGCATTCATCATTGTGCCT...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATAGAAGCCCAAGTCCTTaGTCCTTGCTCAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHRSPSP*SLLRAL
Trigger: AAGAGCCCTGAGCAAGGAGCAAGGACTTGGGCTTCT...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp TTGCCTCATCTCACAAATGGGAAAACTGGAGCCCAGAACAAGGAGCATCGTGTCCACATTCTGCTCATGTaGAGGGCTATGCATAAATTG +
Preference number: 4 (lower is better)
Translates to: LPHLTNGKTGAQNKEHRVHILLM*RAMHKL
Trigger: CAATTTATGCATAGCCCTGCACATGAGCAGAATGTG...GACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATAGAGCCCGCTGTGGCTTaGAGTAGCATTTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTYIHQNLIEPAVA*SSISAR
Trigger: GCGTGCAGAAATGCTACTGCAAGCCACAGCGGGCTC...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614107.4
CDS-3UTR CCA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATTGTCACACACACAGTTaGGGTCCCCCAGCCAATGAT +
Preference number: 4 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHCHTHS*GPPAND
Trigger: ATCATTGGCTGGGGGACCCCAACTGTGTGTGTGACA...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp TTGCCTCATCTCACAAATGGGAAAACTGGAGCCCAGAACAAGGAGCATCGTGTCCAAAGGGGGAAGGGATaGGACAACTTTTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: LPHLTNGKTGAQNKEHRVQRGKG*DNFSKF
Trigger: AAATTTGGAAAAGTTGTCCCATCCCTTCCCCCTTTG...GACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCATCTGCTCACAAGACTaGCAAAAATTCACTCAGACG +
Preference number: 4 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPICSQD*QKFTQT
Trigger: CGTCTGAGTGAATTTTTGCCAGTCTTGTGAGCAGAT...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTCTCCTCAAAGACATATaGGGAATGAGTCAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRALLKDI*GMSQGQ
Trigger: TTGACCTTGACTCATTCCCCATATGTCTTTGAGGAG...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp TTGCCTCATCTCACAAATGGGAAAACTGGAGCCCAGAACAAGGAGCATCGTGTCCTGCTATCACCCATATaGAAGTATCCTCACTCTGAT +
Preference number: 4 (lower is better)
Translates to: LPHLTNGKTGAQNKEHRVLLSPI*KYPHSD
Trigger: ATCAGAGTGAGGATACTTCCATATGGGTGATAGCAG...GACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CAA 72 bp CCTGCGTGTATTTTCTCATCAGCCCAATGGGGAGGTTaGACCTATAGATCTCCAAGTTTCCTCCCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: PACIFSSAQWGG*TYRSPSFLPAL
Trigger: TAAAGCTGGGAGGAAACTTGGAGATCTATAGGTCAAACCTCCCCATTGGGCTGATGAGAAAATACACGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATATGGCTTGCTCCTTCTTaGAGATGCAGTCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLIWLAPS*RCSQNA
Trigger: TGCATTCTGACTGCATCTTCAAGAAGGAGCAAGCCA...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTATTCCGAATAGTGGGATaGGCAGCAGGGTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLFRIVG*AAGWTG
Trigger: CCCGGTCCACCCTGCTGCTCATCCCACTATTCGGAA...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TGGTGTTTAGACAGAGTTCCAGAGATGCATTGGGCTATATACAAATCATCTAGTACGGGTGTCGGTGCTTaGAGTCCACAGCGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: WCLDRVPEMHWAIYKSSSTGVGA*SPQRSN
Trigger: GTTACTTCGCTGTGGACTTCAAGCACCGACACCCGT...ACTAGATGATTTGTATATAGCCCAATGCATCTCTGGAACTCTGTCTAAACACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATAGAGGTGGAAGGGAGATaGCCAGAAGAACCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTYIHQNLIEVEGR*PEEPCP
Trigger: TGGACAGGGTTCTTCTGGTCATCTCCCTTCCACCTC...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATACTTTGAAGTGGCCATaGAGAGGGCAAGGGTACTAC +
Preference number: 4 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHTLKWP*RGQGYY
Trigger: GTAGTACCCTTGCCCTCTTCATGGCCACTTCAAAGT...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCTGGCAAAACATTTATTaGGTCATCTACAGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPWQNIY*VIYSSL
Trigger: CAGACTGCTGTAGATGACTCAATAAATGTTTTGCCA...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTAGAAGAGGCGCAAACATaGGTGGGCTGGCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLEEAQT*VGWHLP
Trigger: AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTC...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAATGCATCTATACATCATaGCCAAGGCACCTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: RHMGNESRSNKPGAKRGECIYTS*PRHLFK
Trigger: TTTGAACAGGTGCCTTGGGCATGATGTATAGATGCA...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GCATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACAACAGAGTTCCAGAGATaGATTGGGCTATATACAAAT +
Preference number: 4 (lower is better)
Translates to: ASCPSLYTHTHTHTHTHTTEFQR*IGLYTN
Trigger: ATTTGTATATAGCCCAATGCATCTCTGGAACTCTGT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACCATCCCAGGACAGCCTaGAGAGGAATCATTGAAGCC +
Preference number: 4 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNHPRTA*RGIIEA
Trigger: GGCTTCAATGATTCCTCTCCAGGCTGTCCTGGGATG...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGAATCAGACTCTCCAATaGTTTCGGTCTCCCAGACTT +
Preference number: 4 (lower is better)
Translates to: INGSSSSSKVCGAYLALLNQTLQ*FRSPRL
Trigger: AAGTCTGGGAGACCGAAACCATTGGAGAGTCTGATT...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAATTTGCTGACATTCTCTaGGGAGAAGGCAAATACTGT +
Preference number: 4 (lower is better)
Translates to: RHMGNESRSNKPGAKRGEFADIL*GEGKYC
Trigger: ACAGTATTTGCCTTCTCCCCAGAGAATGTCAGCAAA...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTATGGGCATGTTGGGTGTaGCTTCTCCCGACACCCCAG +
Preference number: 4 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLWACWV*LLPTPQ
Trigger: CTGGGGTGTCGGGAGAAGCCACACCCAACATGCCCA...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATACACCAAATGCTGACATaGAATGAGCTAGGCCACACA +
Preference number: 4 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLIHQMLT*NELGHT
Trigger: TGTGTGGCCTAGCTCATTCCATGTCAGCATTTGGTG...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GCATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACAGTTCCAGAGATGCATTaGGCTATATACAAATCATCT +
Preference number: 4 (lower is better)
Translates to: ASCPSLYTHTHTHTHTHTVPEMH*AIYKSS
Trigger: AGATGATTTGTATATAGCCCAATGCATCTCTGGAAC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGTTTCTTATCCTTTCCTaGCCCAGGCAAATACCACAG +
Preference number: 4 (lower is better)
Translates to: INGSSSSSKVCGAYLALLFLILS*PRQIPQ
Trigger: CTGTGGTATTTGCCTGGGCCAGGAAAGGATAAGAAA...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
3UTR CAA 72 bp TTTTCACACACAAGCCGTCTCATTTCAACCTTATCCTaGGCCTGTGGGACTAACAATGCCAATGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: FSHTSRLISTLS*ACGTNNANEVL
Trigger: GAGGACTTCATTGGCATTGTTAGTCCCACAGGCCAAGGATAAGGTTGAAATGAGACGGCTTGTGTGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATGTAGAGGGCCTTCACTaGCAGGTAGTAATAATCCTG +
Preference number: 4 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHVEGLH*QVVIIL
Trigger: CAGGATTATTACTACCTGTCAGTGAAGGCCCTCTAC...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACCAGCCTCAGCATCCTTaGCTTGGAATCCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNQPQHP*LGIPFP
Trigger: AGGAAATGGGATTCCAAGTCAAGGATGCTGAGGCTG...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACACTTTGAAGTGGCCATaGAGAGGGCAAGGGTACTAC +
Preference number: 4 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNTLKWP*RGQGYY
Trigger: GTAGTACCCTTGCCCTCTTCATGGCCACTTCAAAGT...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCATCATGAAACAAGTCTaGAAACAGAATTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPIMKQV*KQNLDR
Trigger: CCTGTCCAAATTCTGTTTGCAGACTTGTTTCATGAT...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GCATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACAAAAGTATTATCACTTTaGTGGCTTCACTTTGAAGTG +
Preference number: 4 (lower is better)
Translates to: ASCPSLYTHTHTHTHTHTKVLSL*WLHFEV
Trigger: CACTTCAAAGTGAAGCCAGCAAAGTGATAATACTTT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATATGCGTACTGCATGGATaGTTTGAGTGTCACATTCTG +
Preference number: 4 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLICVLHG*FECHIL
Trigger: CAGAATGTGACACTCAAAGCATCCATGCAGTACGCA...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATACAGGAAAAGAAGGAATaGGCACACCAAAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLIQEKKE*AHQNVP
Trigger: TGGGACATTTTGGTGTGCCCATTCCTTCTTTTCCTG...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TGGTGTTTAGACAGAGTTCCAGAGATGCATTGGGCTATATACAAATCATCTAGTAGATCGCCCTCAGCATaGACGACACAAACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: WCLDRVPEMHWAIYKSSSRSPSA*TTQTGS
Trigger: TGAACCTGTTTGTGTCGTTCATGCTGAGGGCGATCT...ACTAGATGATTTGTATATAGCCCAATGCATCTCTGGAACTCTGTCTAAACACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATAAGATCGCCCTCAGCATaGACGACACAAACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTYIHQNLIRSPSA*TTQTGS
Trigger: TGAACCTGTTTGTGTCGTTCATGCTGAGGGCGATCT...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATAGAACCCTGTCCATCTTaGGCTGGGGGTAAAACAATG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTYIHQNLIEPCPS*AGGKTM
Trigger: CATTGTTTTACCCCCAGCTCAAGATGGACAGGGTTC...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TGGTGTTTAGACAGAGTTCCAGAGATGCATTGGGCTATATACAAATCATCTAGTGAACCCTGTCCATCTTaGGCTGGGGGTAAAACAATG +
Preference number: 4 (lower is better)
Translates to: WCLDRVPEMHWAIYKSSSEPCPS*AGGKTM
Trigger: CATTGTTTTACCCCCAGCTCAAGATGGACAGGGTTC...ACTAGATGATTTGTATATAGCCCAATGCATCTCTGGAACTCTGTCTAAACACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGGCTGGACACTCATaGCAGGGAAAGAGAAATTTC +
Preference number: 4 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNLAGHS*QGKRNF
Trigger: GAAATTTCTCTTTCCCTGTCATGAGTGTCCAGCCAG...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TGGTGTTTAGACAGAGTTCCAGAGATGCATTGGGCTATATACAAATCATCTAGTCCCTTCCACAAAGAGTaGGGATCAGATGAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: WCLDRVPEMHWAIYKSSSPFHKE*GSDERG
Trigger: ACCTCTCTCATCTGATCCTCACTCTTTGTGGAAGGG...ACTAGATGATTTGTATATAGCCCAATGCATCTCTGGAACTCTGTCTAAACACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATACTGCATGGATGCTTTaGGTGTCACATTCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHTAWML*VSHSAH
Trigger: ATGAGCAGAATGTGACACTCAAAGCATCCATGCAGT...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATATGTCCACAGGACCCTTaGTTCAGTAATGCACACCAG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTYIHQNLICPQDP*FSNAHQ
Trigger: CTGGTGTGCATTACTGAAGCAAGGGTCCTGTGGACA...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAAACAGAGTTCCAGAGATaGATTGGGCTATATACAAAT +
Preference number: 4 (lower is better)
Translates to: RHMGNESRSNKPGAKRGETEFQR*IGLYTN
Trigger: ATTTGTATATAGCCCAATGCATCTCTGGAACTCTGT...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATAAAGTATTATCACTTTaGTGGCTTCACTTTGAAGTG +
Preference number: 4 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHKVLSL*WLHFEV
Trigger: CACTTCAAAGTGAAGCCAGCAAAGTGATAATACTTT...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATACAAAGGGGGAAGGGATaGGACAACTTTTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLIQRGKG*DNFSKF
Trigger: AAATTTGGAAAAGTTGTCCCATCCCTTCCCCCTTTG...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAAGTTCCAGAGATGCATTaGGCTATATACAAATCATCT +
Preference number: 4 (lower is better)
Translates to: RHMGNESRSNKPGAKRGEVPEMH*AIYKSS
Trigger: AGATGATTTGTATATAGCCCAATGCATCTCTGGAAC...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTATCCCTGCTCCCTGGCTaGACACTCATGACAGGGAAA +
Preference number: 4 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLSLLPG*TLMTGK
Trigger: TTTCCCTGTCATGAGTGTCCAGCCAGGGAGCAGGGA...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATAAAAGAAGGTAAGCCCTaGATCACAGAGCAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTYIHQNLIKEGKP*ITEQVA
Trigger: AGCCACCTGCTCTGTGATCCAGGGCTTACCTTCTTT...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp TGGTGTTTAGACAGAGTTCCAGAGATGCATTGGGCTATATACAAATCATCTAGTCCCAATGGGGAGGTTTaGCCTATAGATCTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: WCLDRVPEMHWAIYKSSSPNGEV*PIDLQV
Trigger: AACTTGGAGATCTATAGGTCAAACCTCCCCATTGGG...ACTAGATGATTTGTATATAGCCCAATGCATCTCTGGAACTCTGTCTAAACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACACTGCATGGATGCTTTaGGTGTCACATTCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNTAWML*VSHSAH
Trigger: ATGAGCAGAATGTGACACTCAAAGCATCCATGCAGT...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACAGGTTACATGCGTACTaGATGGATGCTTTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNRLHAY*MDALSV
Trigger: GACACTCAAAGCATCCATGCAGTACGCATGTAACCT...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp TGGTGTTTAGACAGAGTTCCAGAGATGCATTGGGCTATATACAAATCATCTAGTATTGCCTCCCATGTCTaGAGACTGAAGTTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: WCLDRVPEMHWAIYKSSSIASHV*RLKFLH
Trigger: GTGCAGAAACTTCAGTCTCCAGACATGGGAGGCAAT...ACTAGATGATTTGTATATAGCCCAATGCATCTCTGGAACTCTGTCTAAACACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTACACCAGCTTCCACTGTaGTGTCCAAATGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLHQLPL*CPNGRD
Trigger: GTCCCTTCCATTTGGACACCACAGTGGAAGCTGGTG...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACAGAAGCATTGGAAGTTaGCTCATCTCACAAATGGGA +
Preference number: 4 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNRSIGS*LISQMG
Trigger: TCCCATTTGTGAGATGAGGCAACTTCCAATGCTTCT...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp CTCTACACACACACACACACACACACACACACACACACATATATTCATCAAAACAGGCACAATGATGAATaGCCTTTTACCTGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: LYTHTHTHTHTHTYIHQNRHNDE*PFTCLD
Trigger: GTCAAGACAGGTAAAAGGGCATTCATCATTGTGCCT...GTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATACTGTGCAAGGTTACATaGGTACTGCATGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTYIHQNLILCKVT*VLHGCF
Trigger: AAAGCATCCATGCAGTACGCATGTAACCTTGCACAG...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTACTCCATTGCTTCTCCTaGAAGAGTCCTGGACAACCT +
Preference number: 4 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLLHCFS*KSPGQP
Trigger: AGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTAGCTCCTTTCTTCCTCTaGCTTTGCCAAAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLAPFFL*LCQRSR
Trigger: CCTGGATCTTTGGCAAAGCCAGAGGAAGAAAGGAGC...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR GCA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATCAAGGTATATATGACTaGATCTATACATCATGCCCA +
Preference number: 4 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHQGIYD*IYTSCP
Trigger: TGGGCATGATGTATAGATGCAGTCATATATACCTTG...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTACACAAATGGGAAAACTaGAGCCCAGAACAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLHKWEN*SPEQGA
Trigger: TGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTG...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTAAAGACATATGGGGAATaGGTCAAGGTCAAACAAGCC +
Preference number: 4 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLKTYGE*VKVKQA
Trigger: GGCTTGTTTGACCTTGACTCATTCCCCATATGTCTT...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR TCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTACATCAAAACCTGATATaGGGCACAATGATGAATGCC +
Preference number: 4 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLHQNLI*GTMMNA
Trigger: GGCATTCATCATTGTGCCTCATATCAGGTTTTGATG...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CCA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTACTGCTATCACCCATATaGAAGTATCCTCACTCTGAT +
Preference number: 4 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLLLSPI*KYPHSD
Trigger: ATCAGAGTGAGGATACTTCCATATGGGTGATAGCAG...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS GCA 90 bp CTCCGCGCCTGTGTGGCCGGCTGGCGGCCGGGGTCCGTGTGTCCCTaGGCGGCGGCGTGTGCGTGTGCGCACGCGGGGACCACGCTCGCC +
Preference number: 5 (lower is better)
Translates to: LRACVAGWRPGSVCP*AAACACAHAGTTLA
Trigger: GGCGAGCGTGGTCCCCGCGTGCGCACACGCACACGCCGCCGCGCAGGGACACACGGACCCCGGCCGCCAGCCGGCCACACAGGCGCGGAG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304166.9
CDS CCA 90 bp CGCAGCGCCCCCTTTGCCCGCCCCGCGCGGCGCGGCAGTCCAGCTTaGCTCCGTCCTGCGGGAGAGGCGCCGCCTCCGCCGCGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: RSAPFARPARRGSPA*LRPAGEAPPPPRSQ
Trigger: CTGGCTTCGCGGCGGAGGCGGCGCCTCTCCCGCAGGACGGAGCCAAGCTGGACTGCCGCGCCGCGCGGGGCGGGCAAAGGGGGCGCTGCG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304166.9
CDS CCA 90 bp CGAGGAGCGCGCGCCGAGCCGGGTCTCCGCGCCTGTGTGGCCGGCTaGCGGCCGGGGTCCGTGTGTCCCTGCGCGGCGGCGTGTGCGTGT +
Preference number: 5 (lower is better)
Translates to: RGARAEPGLRACVAG*RPGSVCPCAAACAC
Trigger: ACACGCACACGCCGCCGCGCAGGGACACACGGACCCCGGCCGCCAGCCGGCCACACAGGCGCGGAGACCCGGCTCGGCGCGCGCTCCTCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCGCTCAGGTGGCCAGATaGTCAGCAGGGAGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: QGEGRGANMRGLAPACGPAQVAR*SAGRPD
Trigger: GTCTGGCCTCCCTGCTGACAATCTGGCCACCTGAGC...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCTCAGGTGGCCAGATaGTCAGCAGGGAGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPAQVAR*SAGRPD
Trigger: GTCTGGCCTCCCTGCTGACAATCTGGCCACCTGAGC...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTCCTCTCGGGCTTTCTaGGGGACTCGCGGGCTTAAA +
Preference number: 5 (lower is better)
Translates to: GPAQGEGRGANMRGLAPASSRAF*GTRGLK
Trigger: TTTAAGCCCGCGAGTCCCCAAGAAAGCCCGAGAGGA...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409489.5
CDS-3UTR CAA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCAAGCCCATCAGCTCATaGGCCCTCTGGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GEGRGANMRGLAPACGPSKPISS*ALWIFS
Trigger: GGAGAAGATCCAGAGGGCCAATGAGCTGATGGGCTT...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGCCAACCACAGGGCCTTaGATCACCCACCACAGAGCT +
Preference number: 5 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRPTTGP*ITHHRA
Trigger: AGCTCTGTGGTGGGTGATCAAAGGCCCTGTGGTTGG...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCAACCACAGGGCCTTaGATCACCCACCACAGAGCT +
Preference number: 5 (lower is better)
Translates to: AQGEGRGANMRGLAPACGPTTGP*ITHHRA
Trigger: AGCTCTGTGGTGGGTGATCAAAGGCCCTGTGGTTGG...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCCAGACATGCGGATTaGGGAGCTGCTCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPARHAD*GAALAQ
Trigger: CTGAGCAAGAGCAGCTCCCAAATCCGCATGTCTGGC...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGGCCAGACATGCGGATTaGGGAGCTGCTCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLARHAD*GAALAQ
Trigger: CTGAGCAAGAGCAGCTCCCAAATCCGCATGTCTGGC...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGCCCAGATCCTTGAAGTaGACTCCCAGGGGCATGGCT +
Preference number: 5 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLRPRSLK*TPRGMA
Trigger: AGCCATGCCCCTGGGAGTCAACTTCAAGGATCTGGG...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS CCA 90 bp CAGGGAGGCCAGACATGCGGATTTGGGAGCTGCTCTTGCTCAGGATaGAGAGCTGGGTGCCCCCATTCACCCCACTGCTGGCCAGAGACG +
Preference number: 5 (lower is better)
Translates to: QGGQTCGFGSCSCSG*RAGCPHSPHCWPET
Trigger: CGTCTCTGGCCAGCAGTGGGGTGAATGGGGGCACCCAGCTCTCCATCCTGAGCAAGAGCAGCTCCCAAATCCGCATGTCTGGCCTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCGAGATGAAGCAGTGGTaGCTGTCCTGCTCCGCATAC +
Preference number: 5 (lower is better)
Translates to: QGEGRGANMRGLAPACGPEMKQW*LSCSAY
Trigger: GTATGCGGAGCAGGACAGCAACCACTGCTTCATCTC...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp TGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGGAGATGAAGCAGTGGTaGCTGTCCTGCTCCGCATAC +
Preference number: 5 (lower is better)
Translates to: CPRGGKRRKHAWAGTCLREMKQW*LSCSAY
Trigger: GTATGCGGAGCAGGACAGCAACCACTGCTTCATCTC...CCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS GCA 90 bp ACATGCGGATTTGGGAGCTGCTCTTGCTCAGGATGGAGAGCTGGGTaGCCCCATTCACCCCACTGCTGGCCAGAGACGGGTGTCGGTGCT +
Preference number: 5 (lower is better)
Translates to: TCGFGSCSCSGWRAG*PHSPHCWPETGVGA
Trigger: AGCACCGACACCCGTCTCTGGCCAGCAGTGGGGTGAATGGGGGCACCCAGCTCTCCATCCTGAGCAAGAGCAGCTCCCAAATCCGCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTCTCCAGGCACATGGCTaGCTCCTTCTTGAAGATGCA +
Preference number: 5 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPLQAHG*LLLEDA
Trigger: TGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGAG...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAAAGCCCATCAGCTCATaGGCCCTCTGGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPKPISS*ALWIFS
Trigger: GGAGAAGATCCAGAGGGCCAATGAGCTGATGGGCTT...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTTTCCAACACGTGATGTaGTCCCACATCCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPFQHVM*SHIPGQ
Trigger: CTGTCCTGGGATGTGGGACAACATCACGTGTTGGAA...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTTTCGGTCTCCCAGACTaGGTCTGGGTTGAAGATTCG +
Preference number: 5 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPFGLPD*VWVEDS
Trigger: CGAATCTTCAACCCAGACCAAGTCTGGGAGACCGAA...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GGGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCACGAGTCTTTCCCTTTaGCTGACATTCTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: GPAQGEGRGANMRGLAPATSLSL*LTFSGE
Trigger: CTCCCCAGAGAATGTCAGCAAAAGGGAAAGACTCGT...GGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGGCCAGACATGCGGATTaGGGAGCTGCTCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGARHAD*GAALAQ
Trigger: CTGAGCAAGAGCAGCTCCCAAATCCGCATGTCTGGC...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGCTAGGCTTCAGGGACTaGGGCCCAGGACTGAGAAGA +
Preference number: 5 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGLGFRD*GPGLRR
Trigger: TCTTCTCAGTCCTGGGCCCAAGTCCCTGAAGCCTAG...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCACTGTGGTGTGCATGGTaGGAGACAGCTTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPLWCAW*ETASGR
Trigger: CCTTCCAGAAGCTGTCTCCAACCATGCACACCACAG...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp GCCACATCAGCAGCAGCCTCTGCTAATGGGCATGTTGGGTGTGGCTTCTCCCGACCAGGGGGCTGCTCCTaGGATCTGGAGCTGGCCACT +
Preference number: 5 (lower is better)
Translates to: ATSAAASANGHVGCGFSRPGGCS*DLELAT
Trigger: AGTGGCCAGCTCCAGATCCAAGGAGCAGCCCCCTGG...TCGGGAGAAGCCACACCCAACATGCCCATTAGCAGAGGCTGCTGCTGATGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCCTCAGCATCCTTGACTaGGAATCCCATTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: GEGRGANMRGLAPACGPSLSILD*ESHFLQ
Trigger: CTGGAGGAAATGGGATTCCAAGTCAAGGATGCTGAG...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCCACCACTCCCATGTCTaGGTCTGGGTTGAAGATTCG +
Preference number: 5 (lower is better)
Translates to: QGEGRGANMRGLAPACGPHHSHV*VWVEDS
Trigger: CGAATCTTCAACCCAGACCAAGACATGGGAGTGGTG...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409363.5
CDS GCA 90 bp GATTGTCAGCAGGGAGGCCAGACATGCGGATTTGGGAGCTGCTCTTaGTCAGGATGGAGAGCTGGGTGCCCCCATTCACCCCACTGCTGG +
Preference number: 5 (lower is better)
Translates to: DCQQGGQTCGFGSCS*SGWRAGCPHSPHCW
Trigger: CCAGCAGTGGGGTGAATGGGGGCACCCAGCTCTCCATCCTGAGCAAGAGCAGCTCCCAAATCCGCATGTCTGGCCTCCCTGCTGACAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS GCA 90 bp TGGCCAGATTGTCAGCAGGGAGGCCAGACATGCGGATTTGGGAGCTaGTCTTGCTCAGGATGGAGAGCTGGGTGCCCCCATTCACCCCAC +
Preference number: 5 (lower is better)
Translates to: WPDCQQGGQTCGFGS*SCSGWRAGCPHSPH
Trigger: GTGGGGTGAATGGGGGCACCCAGCTCTCCATCCTGAGCAAGAGCAGCTCCCAAATCCGCATGTCTGGCCTCCCTGCTGACAATCTGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS CCA 90 bp GAAACGTGCACGACACCAGCCATGACACTTCTTGGCCAGCACCACTaGCCTCCCACTGACAGCAGCGGCAGGTCAGCCCCAATGTGTCTC +
Preference number: 5 (lower is better)
Translates to: ETCTTPAMTLLGQHH*PPTDSSGRSAPMCL
Trigger: GAGACACATTGGGGCTGACCTGCCGCTGCTGTCAGTGGGAGGCCAGTGGTGCTGGCCAAGAAGTGTCATGGCTGGTGTCGTGCACGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000431811.5
ENST00000614107.4
CDS-3UTR CAA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGGCGCGGCAGTCCAGCTaGGCTCCGTCCTGCGGGAGA +
Preference number: 5 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGARQSS*APSCGR
Trigger: TCTCCCGCAGGACGGAGCCAAGCTGGACTGCCGCGC...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304166.9
CDS-3UTR CAA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCATGGCTTGCTCCTTCTaGAAGATGCAGTCAGAATGC +
Preference number: 5 (lower is better)
Translates to: GEGRGANMRGLAPACGPSMACSF*KMQSEC
Trigger: GCATTCTGACTGCATCTTCAAGAAGGAGCAAGCCAT...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCATTCCAACACGTGATGTaGTCCCACATCCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPFQHVM*SHIPGQ
Trigger: CTGTCCTGGGATGTGGGACAACATCACGTGTTGGAA...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCAGACTTGGTCTGGGTaGAAGATTCGGAAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLQTWSG*KIRKSS
Trigger: TGAGCTCTTCCGAATCTTCAACCCAGACCAAGTCTG...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGCTACAGAATCCAGTCTTaGATGAAGACGGAGATCGCC +
Preference number: 5 (lower is better)
Translates to: GEGRGANMRGLAPACGPSYRIQS*MKTEIA
Trigger: GGCGATCTCCGTCTTCATCAAAGACTGGATTCTGTA...GCTGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGACGAGTCTTTCCCTTTaGCTGACATTCTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLTSLSL*LTFSGE
Trigger: CTCCCCAGAGAATGTCAGCAAAAGGGAAAGACTCGT...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGGGCTCTCAGCTCCTTTaGGATCAAACGAAAAGCACC +
Preference number: 5 (lower is better)
Translates to: ACPRGGKRRKHAWAGTCLGSQLL*DQTKST
Trigger: GGTGCTTTTCGTTTGATCCAAAAGGAGCTGAGAGCC...CAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGCTCCAGGCACATGGCTaGCTCCTTCTTGAAGATGCA +
Preference number: 5 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGLQAHG*LLLEDA
Trigger: TGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGAG...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGTTCGGTCTCCCAGACTaGGTCTGGGTTGAAGATTCG +
Preference number: 5 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGFGLPD*VWVEDS
Trigger: CGAATCTTCAACCCAGACCAAGTCTGGGAGACCGAA...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTTACAGAATCCAGTCTTaGATGAAGACGGAGATCGCC +
Preference number: 5 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPYRIQS*MKTEIA
Trigger: GGCGATCTCCGTCTTCATCAAAGACTGGATTCTGTA...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTTCGCTTGATCTCCGCTaGTACCTCACCATTCAGAAA +
Preference number: 5 (lower is better)
Translates to: AQGEGRGANMRGLAPACGSLDLR*YLTIQK
Trigger: TTTCTGAATGGTGAGGTACAAGCGGAGATCAAGCGA...ACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCACTTCGCCATTTTCGCTaGATCTCCGCTTGTACCTCA +
Preference number: 5 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPLRHFR*ISACTS
Trigger: TGAGGTACAAGCGGAGATCAAGCGAAAATGGCGAAG...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGACCAGGGGGCTGCTCCTaGGATCTGGAGCTGGCCACT +
Preference number: 5 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRPGGCS*DLELAT
Trigger: AGTGGCCAGCTCCAGATCCAAGGAGCAGCCCCCTGG...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAACAGCCTCAGCATCCTaGACTTGGAATCCCATTTCC +
Preference number: 5 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPTASAS*TWNPIS
Trigger: GGAAATGGGATTCCAAGTCAAGGATGCTGAGGCTGT...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp GGCCTGCCCAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTATGTCTTGGTCTGGGTaGAAGATTCGGAAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: GLPKGREEAQTCVGWHLPMSWSG*KIRKSS
Trigger: TGAGCTCTTCCGAATCTTCAACCCAGACCAAGACAT...AGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTGGGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409363.5
CDS TCA 90 bp TGCCCCCATTCACCCCACTGCTGGCCAGAGACGGGTGTCGGTGCTTaGAGTCCACAGCGAAGTAACGGTTCACCTTCCAGCTTCGCCATT +
Preference number: 5 (lower is better)
Translates to: CPHSPHCWPETGVGA*SPQRSNGSPSSFAI
Trigger: AATGGCGAAGCTGGAAGGTGAACCGTTACTTCGCTGTGGACTTCAAGCACCGACACCCGTCTCTGGCCAGCAGTGGGGTGAATGGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCATCGCTTGATCTCCGCTaGTACCTCACCATTCAGAAA +
Preference number: 5 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPSLDLR*YLTIQK
Trigger: TTTCTGAATGGTGAGGTACAAGCGGAGATCAAGCGA...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GGTCAGGGCCCAGGGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGCTTCGCCATTTTCGCTaGATCTCCGCTTGTACCTCA +
Preference number: 5 (lower is better)
Translates to: GQGPGDHSGWDQYQNKEGLRHFR*ISACTS
Trigger: TGAGGTACAAGCGGAGATCAAGCGAAAATGGCGAAG...CCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCCCTGGGCCCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CAA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAAGAGAGAGAGTCCCTTaGAGCTTTCCCTTCCACAAA +
Preference number: 5 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPRERVP*SFPFHK
Trigger: TTTGTGGAAGGGAAAGCTCAAAGGGACTCTCTCTCT...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGGCTCAGGTGGCCAGATaGTCAGCAGGGAGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGAQVAR*SAGRPD
Trigger: GTCTGGCCTCCCTGCTGACAATCTGGCCACCTGAGC...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CAA 90 bp CTCCATTGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCACTGCTAATGGGCATGTaGGGTGTGGCTTCTCCCGAC +
Preference number: 5 (lower is better)
Translates to: LHCFSCKSPGQPSVTRAPLLMGM*GVASPD
Trigger: GTCGGGAGAAGCCACACCCAACATGCCCATTAGCAG...TGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp CCCAGATTCGGGTGCAGGTGCTTCAGGATTCGCCGACATCAGAGGCAGGTGGCTACCACACTGACTCCATaGCTTCTCCTGCAAGAGTCC +
Preference number: 5 (lower is better)
Translates to: PRFGCRCFRIRRHQRQVATTLTP*LLLQES
Trigger: GGACTCTTGCAGGAGAAGCAATGGAGTCAGTGTGGT...AGCCACCTGCCTCTGATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp AAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCACTCGCGGGCTTAAATTaGTTAAGTAGATGCTGGACT +
Preference number: 5 (lower is better)
Translates to: KGREEAQTCVGWHLPAVPLAGLN*LSRCWT
Trigger: AGTCCAGCATCTACTTAACAAATTTAAGCCCGCGAG...TGGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409489.5
CDS-3UTR CAA 90 bp GGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACAATTCCAGTCTGCCAGACATGCGGATTaGGGAGCTGCTCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: GTTVGGTSTKTRRGQFQSARHAD*GAALAQ
Trigger: CTGAGCAAGAGCAGCTCCCAAATCCGCATGTCTGGC...AGACTGGAATTGTCCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CAA 90 bp CTCCATTGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCAGGTGAGTGGGCATCCTaGGCGGGGATTATAGATGCA +
Preference number: 5 (lower is better)
Translates to: LHCFSCKSPGQPSVTRAPGEWAS*AGIIDA
Trigger: TGCATCTATAATCCCCGCCAAGGATGCCCACTCACC...TGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp CAAGGGGAGGGAAGAGGCGCAAACATGCGTGGGCTGGCACCTGCCTGCGGTCCCAGGGCTATGCATAAATaGGTGAGCCATTTACTCATT +
Preference number: 5 (lower is better)
Translates to: QGEGRGANMRGLAPACGPRAMHK*VSHLLI
Trigger: AATGAGTAAATGGCTCACCAATTTATGCATAGCCCT...GGGACCGCAGGCAGGTGCCAGCCCACGCATGTTTGCGCCTCTTCCCTCCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp TCCCCAGCTGGGCACTGCCCTATTTTACATTCTCAGGCTGAGGGTGTGCAACCTAAGCCCATCAGCTCATaGGCCCTCTGGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SPAGHCPILHSQAEGVQPKPISS*ALWIFS
Trigger: GGAGAAGATCCAGAGGGCCAATGAGCTGATGGGCTT...AGGTTGCACACCCTCAGCCTGAGAATGTAAAATAGGGCAGTGCCCAGCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp GGAGGGCTTAAGGGCTCTCTGTGGTGTGCATGGTTGGAGACAGCTTCTGGAAGGTTCGGTCTCCCAGACTaGGTCTGGGTTGAAGATTCG +
Preference number: 5 (lower is better)
Translates to: GGLKGSLWCAWLETASGRFGLPD*VWVEDS
Trigger: CGAATCTTCAACCCAGACCAAGTCTGGGAGACCGAA...CCTTCCAGAAGCTGTCTCCAACCATGCACACCACAGAGAGCCCTTAAGCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp CCAAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGCCAACCACAGGGCCTTaGATCACCCACCACAGAGCT +
Preference number: 5 (lower is better)
Translates to: PNLRSIYMSGVRAQGTTVPTTGP*ITHHRA
Trigger: AGCTCTGTGGTGGGTGATCAAAGGCCCTGTGGTTGG...CACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CAA 90 bp TTGCCTCATCTCACAAATGGGAAAACTGGAGCCCAGAACAAGGAGCATCGTGTCGCTCAGGTGGCCAGATaGTCAGCAGGGAGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: LPHLTNGKTGAQNKEHRVAQVAR*SAGRPD
Trigger: GTCTGGCCTCCCTGCTGACAATCTGGCCACCTGAGC...GACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp CCAAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGCTAGGCTTCAGGGACTaGGGCCCAGGACTGAGAAGA +
Preference number: 5 (lower is better)
Translates to: PNLRSIYMSGVRAQGTTVLGFRD*GPGLRR
Trigger: TCTTCTCAGTCCTGGGCCCAAGTCCCTGAAGCCTAG...CACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp CTCCATTGCTTCTCCTGCAAGAGTCCTGGACAACCTTCGGTCACCAGAGCCCCAAAATGTCCCAGATCCTaGAAGTTGACTCCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LHCFSCKSPGQPSVTRAPKCPRS*KLTPRG
Trigger: GCCCCTGGGAGTCAACTTCAAGGATCTGGGACATTT...TGGGGCTCTGGTGACCGAAGGTTGTCCAGGACTCTTGCAGGAGAAGCAATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS GCA 90 bp CCCATCAGCTCATTGGCCCTCTGGATCTTCTCCAGGCACATGGCTTaGTCCTTCTTGAAGATGCAGTCAGAATGCATGGCAGGGGCCATA +
Preference number: 5 (lower is better)
Translates to: PISSLALWIFSRHMA*SFLKMQSECMAGAI
Trigger: TATGGCCCCTGCCATGCATTCTGACTGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGAGAAGATCCAGAGGGCCAATGAGCTGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000431811.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACAATTCCAGTCTCTCCAGGCACATGGCTaGCTCCTTCTTGAAGATGCA +
Preference number: 5 (lower is better)
Translates to: GTTVGGTSTKTRRGQFQSLQAHG*LLLEDA
Trigger: TGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGAG...AGACTGGAATTGTCCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GGAATGGGCACACCAAAATGTCCCAGATCCTTGAAGTTGACTCCCAGGGGCATGGAGATGAAGCAGTGGTaGCTGTCCTGCTCCGCATAC +
Preference number: 5 (lower is better)
Translates to: GMGTPKCPRSLKLTPRGMEMKQW*LSCSAY
Trigger: GTATGCGGAGCAGGACAGCAACCACTGCTTCATCTC...CATGCCCCTGGGAGTCAACTTCAAGGATCTGGGACATTTTGGTGTGCCCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGAGGGCCTAGAGAAGCATaGGAAGTTGCCTCATCTCAC +
Preference number: 5 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRGPREA*EVASSH
Trigger: GTGAGATGAGGCAACTTCCAATGCTTCTCTAGGCCC...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp CCCAGATTCGGGTGCAGGTGCTTCAGGATTCGCCGACATCAGAGGCAGGTGGCTGATAGACAATGTGACTaGGACTTAAGTGGGGAGTCA +
Preference number: 5 (lower is better)
Translates to: PRFGCRCFRIRRHQRQVADRQCD*DLSGES
Trigger: TGACTCCCCACTTAAGTCCAAGTCACATTGTCTATC...AGCCACCTGCCTCTGATGTCGGCGAATCCTGAAGCACCTGCACCCGAATCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS CCA 90 bp CTGTCACCAAAATCAGACTCTCCAATGGTTTCGGTCTCCCAGACTTaGTCTGGGTTGAAGATTCGGAAGAGCTCAGGGCAGCTGACCAGG +
Preference number: 5 (lower is better)
Translates to: LSPKSDSPMVSVSQT*SGLKIRKSSGQLTR
Trigger: CCTGGTCAGCTGCCCTGAGCTCTTCCGAATCTTCAACCCAGACCAAGTCTGGGAGACCGAAACCATTGGAGAGTCTGATTTTGGTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GCATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACAAAGCCCATCAGCTCATaGGCCCTCTGGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ASCPSLYTHTHTHTHTHTKPISS*ALWIFS
Trigger: GGAGAAGATCCAGAGGGCCAATGAGCTGATGGGCTT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp GGAATGGGCACACCAAAATGTCCCAGATCCTTGAAGTTGACTCCCAGGGGCATGTTCCAACACGTGATGTaGTCCCACATCCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: GMGTPKCPRSLKLTPRGMFQHVM*SHIPGQ
Trigger: CTGTCCTGGGATGTGGGACAACATCACGTGTTGGAA...CATGCCCCTGGGAGTCAACTTCAAGGATCTGGGACATTTTGGTGTGCCCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp GGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACAATTCCAGTCTACAGCCTCAGCATCCTaGACTTGGAATCCCATTTCC +
Preference number: 5 (lower is better)
Translates to: GTTVGGTSTKTRRGQFQSTASAS*TWNPIS
Trigger: GGAAATGGGATTCCAAGTCAAGGATGCTGAGGCTGT...AGACTGGAATTGTCCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTACCACACTGACTCCATaGCTTCTCCTGCAAGAGTCC +
Preference number: 5 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGTTLTP*LLLQES
Trigger: GGACTCTTGCAGGAGAAGCAATGGAGTCAGTGTGGT...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCCCCAGATCCTTGAAGTaGACTCCCAGGGGCATGGCT +
Preference number: 5 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPPRSLK*TPRGMA
Trigger: AGCCATGCCCCTGGGAGTCAACTTCAAGGATCTGGG...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
53% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS GCA 90 bp ACGGCCTTACATTCCACAGTGGAGATGAAGCAGTGGTTGCTGTCCTaGTCCGCATACAGAATCCAGTCTTTGATGAAGACGGAGATCGCC +
Preference number: 5 (lower is better)
Translates to: TALHSTVEMKQWLLS*SAYRIQSLMKTEIA
Trigger: GGCGATCTCCGTCTTCATCAAAGACTGGATTCTGTATGCGGAGCAGGACAGCAACCACTGCTTCATCTCCACTGTGGAATGTAAGGCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS CCA 90 bp ACCAAAATCAGACTCTCCAATGGTTTCGGTCTCCCAGACTTGGTCTaGGTTGAAGATTCGGAAGAGCTCAGGGCAGCTGACCAGGACCAT +
Preference number: 5 (lower is better)
Translates to: TKIRLSNGFGLPDLV*VEDSEELRAADQDH
Trigger: ATGGTCCTGGTCAGCTGCCCTGAGCTCTTCCGAATCTTCAACCCAGACCAAGTCTGGGAGACCGAAACCATTGGAGAGTCTGATTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409489.5
ENST00000614107.4
CDS-3UTR CAA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTACGAGTCTTTCCCTTTaGCTGACATTCTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGTSLSL*LTFSGE
Trigger: CTCCCCAGAGAATGTCAGCAAAAGGGAAAGACTCGT...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CAA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTCTTCGCCATTTTCGCTaGATCTCCGCTTGTACCTCA +
Preference number: 5 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGLRHFR*ISACTS
Trigger: TGAGGTACAAGCGGAGATCAAGCGAAAATGGCGAAG...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CAA 90 bp GCCACATCAGCAGCAGCCTCTGCTAATGGGCATGTTGGGTGTGGCTTCTCCCGAATTTCAACCTTATCCTaGGCCTGTGGGACTAACAAT +
Preference number: 5 (lower is better)
Translates to: ATSAAASANGHVGCGFSRISTLS*ACGTNN
Trigger: ATTGTTAGTCCCACAGGCCAAGGATAAGGTTGAAAT...TCGGGAGAAGCCACACCCAACATGCCCATTAGCAGAGGCTGCTGCTGATGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp GGAATGGGCACACCAAAATGTCCCAGATCCTTGAAGTTGACTCCCAGGGGCATGATGGCTTGCTCCTTCTaGAAGATGCAGTCAGAATGC +
Preference number: 5 (lower is better)
Translates to: GMGTPKCPRSLKLTPRGMMACSF*KMQSEC
Trigger: GCATTCTGACTGCATCTTCAAGAAGGAGCAAGCCAT...CATGCCCCTGGGAGTCAACTTCAAGGATCTGGGACATTTTGGTGTGCCCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTATGGCTTGCTCCTTCTaGAAGATGCAGTCAGAATGC +
Preference number: 5 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGMACSF*KMQSEC
Trigger: GCATTCTGACTGCATCTTCAAGAAGGAGCAAGCCAT...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CAA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTCTCCAGGCACATGGCTaGCTCCTTCTTGAAGATGCA +
Preference number: 5 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRALQAHG*LLLEDA
Trigger: TGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGAG...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp GAAAACAGAGGGTCAGAGAGGGAAGGGTTTTACATAGACCTTATGCTGTCCCCCTTCCAACACGTGATGTaGTCCCACATCCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: ENRGSEREGFYIDLMLSPFQHVM*SHIPGQ
Trigger: CTGTCCTGGGATGTGGGACAACATCACGTGTTGGAA...GGGGGACAGCATAAGGTCTATGTAAAACCCTTCCCTCTCTGACCCTCTGTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp AATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGTTACAGAATCCAGTCTTaGATGAAGACGGAGATCGCC +
Preference number: 5 (lower is better)
Translates to: NLRSIYMSGVRAQGTTVGYRIQS*MKTEIA
Trigger: GGCGATCTCCGTCTTCATCAAAGACTGGATTCTGTA...ACCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CAA 90 bp CCAAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGTCGCTTGATCTCCGCTaGTACCTCACCATTCAGAAA +
Preference number: 5 (lower is better)
Translates to: PNLRSIYMSGVRAQGTTVSLDLR*YLTIQK
Trigger: TTTCTGAATGGTGAGGTACAAGCGGAGATCAAGCGA...CACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS-3UTR CAA 90 bp AGACATATGGGGAATGAGTCAAGGTCAAACAAGCCAGGAGCAAAGCGTGGAGAACTGTGGTGTGCATGGTaGGAGACAGCTTCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: RHMGNESRSNKPGAKRGELWCAW*ETASGR
Trigger: CCTTCCAGAAGCTGTCTCCAACCATGCACACCACAG...TTCTCCACGCTTTGCTCCTGGCTTGTTTGACCTTGACTCATTCCCCATATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS CCA 90 bp CCGGGCCAGTCGCAAGTAGATGCTGGACTCATTGCCTCCCATGTCTaGAGACTGAAGTTTCTGCACAAGGATGACGATAATGCCAATAAA +
Preference number: 5 (lower is better)
Translates to: PGQSQVDAGLIASHV*RLKFLHKDDDNANK
Trigger: TTTATTGGCATTATCGTCATCCTTGTGCAGAAACTTCAGTCTCCAGACATGGGAGGCAATGAGTCCAGCATCTACTTGCGACTGGCCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000409363.5
CDS-3UTR CAA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGGAGATGAAGCAGTGGTaGCTGTCCTGCTCCGCATAC +
Preference number: 5 (lower is better)
Translates to: INGSSSSSKVCGAYLALLEMKQW*LSCSAY
Trigger: GTATGCGGAGCAGGACAGCAACCACTGCTTCATCTC...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATACCAACCACAGGGCCTTaGATCACCCACCACAGAGCT +
Preference number: 5 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLIPTTGP*ITHHRA
Trigger: AGCTCTGTGGTGGGTGATCAAAGGCCCTGTGGTTGG...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp GGGACCACAGTGGGTGGGACCAGTACCAAAACAAGGAGGGGACAATTCCAGTCTATAAAAGGGACATCTTaGCAGAGGTCTCAGAGAGAT +
Preference number: 5 (lower is better)
Translates to: GTTVGGTSTKTRRGQFQSIKGTS*QRSQRD
Trigger: ATCTCTCTGAGACCTCTGCAAAGATGTCCCTTTTAT...AGACTGGAATTGTCCCCTCCTTGTTTTGGTACTGGTCCCACCCACTGTGGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATACTGCTAATGGGCATGTaGGGTGTGGCTTCTCCCGAC +
Preference number: 5 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLILLMGM*GVASPD
Trigger: GTCGGGAGAAGCCACACCCAACATGCCCATTAGCAG...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp GCATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACAGAGAAGCATTGGAAGTaGCCTCATCTCACAAATGGG +
Preference number: 5 (lower is better)
Translates to: ASCPSLYTHTHTHTHTHTEKHWK*PHLTNG
Trigger: CCCATTTGTGAGATGAGGCAACTTCCAATGCTTCTC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGAATTTCAACCTTATCCTaGGCCTGTGGGACTAACAAT +
Preference number: 5 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLRISTLS*ACGTNN
Trigger: ATTGTTAGTCCCACAGGCCAAGGATAAGGTTGAAAT...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATATGGCTTGCTCCTTCTaGAAGATGCAGTCAGAATGC +
Preference number: 5 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHMACSF*KMQSEC
Trigger: GCATTCTGACTGCATCTTCAAGAAGGAGCAAGCCAT...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATTCGCTTGATCTCCGCTaGTACCTCACCATTCAGAAA +
Preference number: 5 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHSLDLR*YLTIQK
Trigger: TTTCTGAATGGTGAGGTACAAGCGGAGATCAAGCGA...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp TTGCCTCATCTCACAAATGGGAAAACTGGAGCCCAGAACAAGGAGCATCGTGTCGAGAAGCATTGGAAGTaGCCTCATCTCACAAATGGG +
Preference number: 5 (lower is better)
Translates to: LPHLTNGKTGAQNKEHRVEKHWK*PHLTNG
Trigger: CCCATTTGTGAGATGAGGCAACTTCCAATGCTTCTC...GACACGATGCTCCTTGTTCTGGGCTCCAGTTTTCCCATTTGTGAGATGAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp ATGAAACCCAGGCTGGTCCAGCTCCCACAAGTGAGGCAGGAACCATGTCTGAGAGAACCTCTTGGAACATaGAGAATACATCAGGTACAT +
Preference number: 5 (lower is better)
Translates to: MKPRLVQLPQVRQEPCLREPLGT*RIHQVH
Trigger: ATGTACCTGATGTATTCTCAATGTTCCAAGAGGTTC...TCTCAGACATGGTTCCTGCCTCACTTGTGGGAGCTGGACCAGCCTGGGTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGAAATGTCCCAGATCCTaGAAGTTGACTCCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: INGSSSSSKVCGAYLALLKCPRS*KLTPRG
Trigger: GCCCCTGGGAGTCAACTTCAAGGATCTGGGACATTT...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS CCA 90 bp CTGCACGCAGCTGAAGTAGATGCTGGACTCATTGCCTCCCATGTCTaGAGACTGAAGTTTCTGCACAAGGATGACGATAATGCCAATAAA +
Preference number: 5 (lower is better)
Translates to: LHAAEVDAGLIASHV*RLKFLHKDDDNANK
Trigger: TTTATTGGCATTATCGTCATCCTTGTGCAGAAACTTCAGTCTCCAGACATGGGAGGCAATGAGTCCAGCATCTACTTCAGCTGCGTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396211.6
ENST00000614107.4
CDS-3UTR CAA 90 bp ATTAATGGCAGCAGCAGTAGCAGTAAGGTCTGTGGGGCTTACTTAGCTTTACTGCTTCGCCATTTTCGCTaGATCTCCGCTTGTACCTCA +
Preference number: 5 (lower is better)
Translates to: INGSSSSSKVCGAYLALLLRHFR*ISACTS
Trigger: TGAGGTACAAGCGGAGATCAAGCGAAAATGGCGAAG...CAGTAAAGCTAAGTAAGCCCCACAGACCTTACTGCTACTGCTGCTGCCATTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTGATAGACAATGTGACTaGGACTTAAGTGGGGAGTCA +
Preference number: 5 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRADRQCD*DLSGES
Trigger: TGACTCCCCACTTAAGTCCAAGTCACATTGTCTATC...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp TCTGGCTTTGCCAAAGATCCAGGAACTTACTTGACTGGCCAAGGACACAGAGCTGTCTGCAAACAGAATTaGGACAGGAGTAACACCAAA +
Preference number: 5 (lower is better)
Translates to: SGFAKDPGTYLTGQGHRAVCKQN*DRSNTK
Trigger: TTTGGTGTTACTCCTGTCCAAATTCTGTTTGCAGAC...AGCTCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATCTTTGGCAAAGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp GCTGACTTCCATGGTCCCTGGGCTCAAGGAGGACTTTATGACAAAGTATTAATAGATCCAGGAACTTACTaGACTGGCCAAGGACACAGA +
Preference number: 5 (lower is better)
Translates to: ADFHGPWAQGGLYDKVLIDPGTY*TGQGHR
Trigger: TCTGTGTCCTTGGCCAGTCAAGTAAGTTCCTGGATC...TATTAATACTTTGTCATAAAGTCCTCCTTGAGCCCAGGGACCATGGAAGTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATGGGCCTAGAGAAGCATaGGAAGTTGCCTCATCTCAC +
Preference number: 5 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHGPREA*EVASSH
Trigger: GTGAGATGAGGCAACTTCCAATGCTTCTCTAGGCCC...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp GCATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACAAGGGCTATGCATAAATaGGTGAGCCATTTACTCATT +
Preference number: 5 (lower is better)
Translates to: ASCPSLYTHTHTHTHTHTRAMHK*VSHLLI
Trigger: AATGAGTAAATGGCTCACCAATTTATGCATAGCCCT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp AAATTTGAGGAGTATTTACATGTCTGGGGTCAGGGCCCAGGGGACCACAGTGGGATGGCAAAACATTTATaGAGTCATCTACAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: KFEEYLHVWGQGPGDHSGMAKHL*SHLQQS
Trigger: AGACTGCTGTAGATGACTCAATAAATGTTTTGCCAT...CCCACTGTGGTCCCCTGGGCCCTGACCCCAGACATGTAAATACTCCTCAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATGAACCTCTTGGAACATaGAGAATACATCAGGTACAT +
Preference number: 5 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHEPLGT*RIHQVH
Trigger: ATGTACCTGATGTATTCTCAATGTTCCAAGAGGTTC...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATAGGTGAGTGGGCATCCTaGGCGGGGATTATAGATGCA +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTYIHQNLIGEWAS*AGIIDA
Trigger: TGCATCTATAATCCCCGCCAAGGATGCCCACTCACC...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp TACTCATTCAGATTTATAAAACATACTGGATCCCACCATGGTGGCAGGCACCATAGAGAGAGAGTCCCTTaGAGCTTTCCCTTCCACAAA +
Preference number: 5 (lower is better)
Translates to: YSFRFIKHTGSHHGGRHHRERVP*SFPFHK
Trigger: TTTGTGGAAGGGAAAGCTCAAAGGGACTCTCTCTCT...ATGGTGCCTGCCACCATGGTGGGATCCAGTATGTTTTATAAATCTGAATGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp CATCCTGTCCATCCCTCTACACACACACACACACACACACACACACACACACATATGGCAAAACATTTATaGAGTCATCTACAGCAGTCT +
Preference number: 5 (lower is better)
Translates to: HPVHPSTHTHTHTHTHTHMAKHL*SHLQQS
Trigger: AGACTGCTGTAGATGACTCAATAAATGTTTTGCCAT...ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGATGGACAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATACAGACTTGGTCTGGGTaGAAGATTCGGAAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTYIHQNLIQTWSG*KIRKSS
Trigger: TGAGCTCTTCCGAATCTTCAACCCAGACCAAGTCTG...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp TGGTGTTTAGACAGAGTTCCAGAGATGCATTGGGCTATATACAAATCATCTAGTCTCAGCATCCTTGACTaGGAATCCCATTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: WCLDRVPEMHWAIYKSSSLSILD*ESHFLQ
Trigger: CTGGAGGAAATGGGATTCCAAGTCAAGGATGCTGAG...ACTAGATGATTTGTATATAGCCCAATGCATCTCTGGAACTCTGTCTAAACACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATATACAGAATCCAGTCTTaGATGAAGACGGAGATCGCC +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTYIHQNLIYRIQS*MKTEIA
Trigger: GGCGATCTCCGTCTTCATCAAAGACTGGATTCTGTA...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp ACAATGATGAATGCCCTTTTACCTGTCTTGACTTTGAACTGGAAAAATCACTTAACGAGTCTTTCCCTTTaGCTGACATTCTCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: TMMNALLPVLTLNWKNHLTSLSL*LTFSGE
Trigger: CTCCCCAGAGAATGTCAGCAAAAGGGAAAGACTCGT...TAAGTGATTTTTCCAGTTCAAAGTCAAGACAGGTAAAAGGGCATTCATCATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACACACACATATATTCATCAAAACCTGATAATAAAAGGGACATCTTaGCAGAGGTCTCAGAGAGAT +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTYIHQNLIIKGTS*QRSQRD
Trigger: ATCTCTCTGAGACCTCTGCAAAGATGTCCCTTTTAT...TATCAGGTTTTGATGAATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000614107.4
CDS CCA 72 bp ATGTGTCTCTGGGCTGCTCACTGCGGGGCCTGTCCGTaGGGCCGGGGCAGACTCCGCAAAGGACGCGCAGCC +
Preference number: 6 (lower is better)
Translates to: MCLWAAHCGACP*GRGRLRKGRAA
Trigger: GGCTGCGCGTCCTTTGCGGAGTCTGCCCCGGCCCCACGGACAGGCCCCGCAGTGAGCAGCCCAGAGACACAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000614107.4
CDS GCA 72 bp TTTGGGAGCTGCTCTTGCTCAGGATGGAGAGCTGGGTaGCCCCATTCACCCCACTGCTGGCCAGAGACGGGT +
Preference number: 6 (lower is better)
Translates to: FGSCSCSGWRAG*PHSPHCWPETG
Trigger: ACCCGTCTCTGGCCAGCAGTGGGGTGAATGGGGGCACCCAGCTCTCCATCCTGAGCAAGAGCAGCTCCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS CAA 90 bp GGCTCAGGTGGCCAGATTGTCAGCAGGGAGGCCAGACATGCGGATTaGGGAGCTGCTCTTGCTCAGGATGGAGAGCTGGGTGCCCCCATT +
Preference number: 6 (lower is better)
Translates to: GSGGQIVSREARHAD*GAALAQDGELGAPI
Trigger: AATGGGGGCACCCAGCTCTCCATCCTGAGCAAGAGCAGCTCCCAAATCCGCATGTCTGGCCTCCCTGCTGACAATCTGGCCACCTGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS CAA 90 bp GATGGAGGAGAGGAGGAGGAGGGGAGCATGGCTCAGGTGGCCAGATaGTCAGCAGGGAGGCCAGACATGCGGATTTGGGAGCTGCTCTTG +
Preference number: 6 (lower is better)
Translates to: DGGEEEEGSMAQVAR*SAGRPDMRIWELLL
Trigger: CAAGAGCAGCTCCCAAATCCGCATGTCTGGCCTCCCTGCTGACAATCTGGCCACCTGAGCCATGCTCCCCTCCTCCTCCTCTCCTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS TCA 72 bp GGACCATCTCACCCACATGGGCGGGCTTCCAACACGTaGTGTTGTCCCACATCCCAGGACAGCCTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: GPSHPHGRASNT*CCPTSQDSLER
Trigger: CCTCTCCAGGCTGTCCTGGGATGTGGGACAACATCACGTGTTGGAAGCCCGCCCATGTGGGTGAGATGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000431811.5
ENST00000614107.4
CDS GCA 72 bp TGTCAGCAGGGAGGCCAGACATGCGGATTTGGGAGCTaGTCTTGCTCAGGATGGAGAGCTGGGTGCCCCCAT +
Preference number: 6 (lower is better)
Translates to: CQQGGQTCGFGS*SCSGWRAGCPH
Trigger: ATGGGGGCACCCAGCTCTCCATCCTGAGCAAGAGCAGCTCCCAAATCCGCATGTCTGGCCTCCCTGCTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS CCA 72 bp CAGACATGCGGATTTGGGAGCTGCTCTTGCTCAGGATaGAGAGCTGGGTGCCCCCATTCACCCCACTGCTGG +
Preference number: 6 (lower is better)
Translates to: QTCGFGSCSCSG*RAGCPHSPHCW
Trigger: CCAGCAGTGGGGTGAATGGGGGCACCCAGCTCTCCATCCTGAGCAAGAGCAGCTCCCAAATCCGCATGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS TCA 72 bp TCACCCCACTGCTGGCCAGAGACGGGTGTCGGTGCTTaGAGTCCACAGCGAAGTAACGGTTCACCTTCCAGC +
Preference number: 6 (lower is better)
Translates to: SPHCWPETGVGA*SPQRSNGSPSS
Trigger: GCTGGAAGGTGAACCGTTACTTCGCTGTGGACTTCAAGCACCGACACCCGTCTCTGGCCAGCAGTGGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS CCA 72 bp GCCAGATTGTCAGCAGGGAGGCCAGACATGCGGATTTaGGAGCTGCTCTTGCTCAGGATGGAGAGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: ARLSAGRPDMRI*ELLLLRMESWV
Trigger: CACCCAGCTCTCCATCCTGAGCAAGAGCAGCTCCCAAATCCGCATGTCTGGCCTCCCTGCTGACAATCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS CAA 72 bp GGCCAGATTGTCAGCAGGGAGGCCAGACATGCGGATTaGGGAGCTGCTCTTGCTCAGGATGGAGAGCTGGGT +
Preference number: 6 (lower is better)
Translates to: GQIVSREARHAD*GAALAQDGELG
Trigger: ACCCAGCTCTCCATCCTGAGCAAGAGCAGCTCCCAAATCCGCATGTCTGGCCTCCCTGCTGACAATCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS GCA 72 bp CTCAGGTGGCCAGATTGTCAGCAGGGAGGCCAGACATaGGGATTTGGGAGCTGCTCTTGCTCAGGATGGAGA +
Preference number: 6 (lower is better)
Translates to: LRWPDCQQGGQT*GFGSCSCSGWR
Trigger: TCTCCATCCTGAGCAAGAGCAGCTCCCAAATCCGCATGTCTGGCCTCCCTGCTGACAATCTGGCCACCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS CAA 90 bp TCATTGGCCCTCTGGATCTTCTCCAGGCACATGGCTTGCTCCTTCTaGAAGATGCAGTCAGAATGCATGGCAGGGGCCATAGGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SLALWIFSRHMACSF*KMQSECMAGAIGSR
Trigger: CCTGCTGCCTATGGCCCCTGCCATGCATTCTGACTGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGAGAAGATCCAGAGGGCCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000431811.5
ENST00000614107.4
CDS CAA 90 bp GCCCATCAGCTCATTGGCCCTCTGGATCTTCTCCAGGCACATGGCTaGCTCCTTCTTGAAGATGCAGTCAGAATGCATGGCAGGGGCCAT +
Preference number: 6 (lower is better)
Translates to: AHQLIGPLDLLQAHG*LLLEDAVRMHGRGH
Trigger: ATGGCCCCTGCCATGCATTCTGACTGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGAGAAGATCCAGAGGGCCAATGAGCTGATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000431811.5
ENST00000614107.4
CDS TCA 72 bp AGGCAAATACTGTGTAGTGGATTCCGAATAGTGGGATaGGCAGCAGGGTGGACCGGGCCAGTCGCAGGAAAG +
Preference number: 6 (lower is better)
Translates to: RQILCSGFRIVG*AAGWTGPVAGK
Trigger: CTTTCCTGCGACTGGCCCGGTCCACCCTGCTGCTCATCCCACTATTCGGAATCCACTACACAGTATTTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436116.1
CDS TCA 72 bp TGTCCCACATCCCAGGACAGCCTGGAGAGGAATCATTaGAGCCCATCAGCTCATTGGCCCTCTGGATCTTCT +
Preference number: 6 (lower is better)
Translates to: CPTSQDSLERNH*SPSAHWPSGSS
Trigger: AGAAGATCCAGAGGGCCAATGAGCTGATGGGCTTCAATGATTCCTCTCCAGGCTGTCCTGGGATGTGGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000431811.5
ENST00000614107.4
CDS TCA 72 bp AGGCAAATACTGTGTAGTGGATTCCGAATAGTGGGATaGGCAGCAGGGTGGACCGGGCCAGTCGCAAGTAGA +
Preference number: 6 (lower is better)
Translates to: RQILCSGFRIVG*AAGWTGPVASR
Trigger: TCTACTTGCGACTGGCCCGGTCCACCCTGCTGCTCATCCCACTATTCGGAATCCACTACACAGTATTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000409363.5
CDS CCA 72 bp AGACTCTCCAATGGTTTCGGTCTCCCAGACTTGGTCTaGGTTGAAGATTCGGAAGAGCTCAGGGCAGCTGAC +
Preference number: 6 (lower is better)
Translates to: RLSNGFGLPDLV*VEDSEELRAAD
Trigger: GTCAGCTGCCCTGAGCTCTTCCGAATCTTCAACCCAGACCAAGTCTGGGAGACCGAAACCATTGGAGAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409489.5
ENST00000614107.4
CDS TCA 72 bp GGATGTGCTGTAGCCAACCGTGTAGAGGGCCTTCACTaGCAGGTAGTAATAATCCTGGTCCCCAGTCTCAGA +
Preference number: 6 (lower is better)
Translates to: GCAVANRVEGLH*QVVIILVPSLR
Trigger: TCTGAGACTGGGGACCAGGATTATTACTACCTGTCAGTGAAGGCCCTCTACACGGTTGGCTACAGCACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS CAA 72 bp TGGTTGCTGTCCTGCTCCGCATACAGAATCCAGTCTTaGATGAAGACGGAGATCGCCCTCAGCATGAACGAC +
Preference number: 6 (lower is better)
Translates to: WLLSCSAYRIQS*MKTEIALSMND
Trigger: GTCGTTCATGCTGAGGGCGATCTCCGTCTTCATCAAAGACTGGATTCTGTATGCGGAGCAGGACAGCAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS CAA 72 bp GAGCCCAGCCCCAGCTCAAACACGAGTCTTTCCCTTTaGCTGACATTCTCTGGGGAGAAGGCAAATACTGTG +
Preference number: 6 (lower is better)
Translates to: EPSPSSNTSLSL*LTFSGEKANTV
Trigger: CACAGTATTTGCCTTCTCCCCAGAGAATGTCAGCAAAAGGGAAAGACTCGTGTTTGAGCTGGGGCTGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000436116.1
ENST00000614107.4
CDS CAA 90 bp AAATCAGACTCTCCAATGGTTTCGGTCTCCCAGACTTGGTCTGGGTaGAAGATTCGGAAGAGCTCAGGGCAGCTGACCAGGACCATCTCA +
Preference number: 6 (lower is better)
Translates to: KSDSPMVSVSQTWSG*KIRKSSGQLTRTIS
Trigger: TGAGATGGTCCTGGTCAGCTGCCCTGAGCTCTTCCGAATCTTCAACCCAGACCAAGTCTGGGAGACCGAAACCATTGGAGAGTCTGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409489.5
ENST00000614107.4
CDS CAA 90 bp ACTGTCACCAAAATCAGACTCTCCAATGGTTTCGGTCTCCCAGACTaGGTCTGGGTTGAAGATTCGGAAGAGCTCAGGGCAGCTGACCAG +
Preference number: 6 (lower is better)
Translates to: TVTKIRLSNGFGLPD*VWVEDSEELRAADQ
Trigger: CTGGTCAGCTGCCCTGAGCTCTTCCGAATCTTCAACCCAGACCAAGTCTGGGAGACCGAAACCATTGGAGAGTCTGATTTTGGTGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409489.5
ENST00000614107.4
CDS CCA 72 bp ATGACGGCCTTACATTCCACAGTGGAGATGAAGCAGTaGTTGCTGTCCTGCTCCGCATACAGAATCCAGTCT +
Preference number: 6 (lower is better)
Translates to: MTALHSTVEMKQ*LLSCSAYRIQS
Trigger: AGACTGGATTCTGTATGCGGAGCAGGACAGCAACCACTGCTTCATCTCCACTGTGGAATGTAAGGCCGTCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS CAA 72 bp ACGGCCTTACATTCCACAGTGGAGATGAAGCAGTGGTaGCTGTCCTGCTCCGCATACAGAATCCAGTCTTTG +
Preference number: 6 (lower is better)
Translates to: TALHSTVEMKQW*LSCSAYRIQSL
Trigger: CAAAGACTGGATTCTGTATGCGGAGCAGGACAGCAACCACTGCTTCATCTCCACTGTGGAATGTAAGGCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS CAA 72 bp AAAATCAGACTCTCCAATGGTTTCGGTCTCCCAGACTaGGTCTGGGTTGAAGATTCGGAAGAGCTCAGGGCA +
Preference number: 6 (lower is better)
Translates to: KIRLSNGFGLPD*VWVEDSEELRA
Trigger: TGCCCTGAGCTCTTCCGAATCTTCAACCCAGACCAAGTCTGGGAGACCGAAACCATTGGAGAGTCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409489.5
ENST00000614107.4
CDS TCA 72 bp AGTAACGGTTCACCTTCCAGCTTCGCCATTTTCGCTTaGTCTCCGCTTGTACCTCACCATTCAGAAAACAGT +
Preference number: 6 (lower is better)
Translates to: SNGSPSSFAIFA*SPLVPHHSENS
Trigger: ACTGTTTTCTGAATGGTGAGGTACAAGCGGAGATCAAGCGAAAATGGCGAAGCTGGAAGGTGAACCGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000614107.4
CDS CCA 72 bp TCGCAAGTAGATGCTGGACTCATTGCCTCCCATGTCTaGAGACTGAAGTTTCTGCACAAGGATGACGATAAT +
Preference number: 6 (lower is better)
Translates to: SQVDAGLIASHV*RLKFLHKDDDN
Trigger: ATTATCGTCATCCTTGTGCAGAAACTTCAGTCTCCAGACATGGGAGGCAATGAGTCCAGCATCTACTTGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304166.9
ENST00000409363.5
CDS CCA 72 bp GCTGAAGTAGATGCTGGACTCATTGCCTCCCATGTCTaGAGACTGAAGTTTCTGCACAAGGATGACGATAAT +
Preference number: 6 (lower is better)
Translates to: AEVDAGLIASHV*RLKFLHKDDDN
Trigger: ATTATCGTCATCCTTGTGCAGAAACTTCAGTCTCCAGACATGGGAGGCAATGAGTCCAGCATCTACTTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396211.6
ENST00000614107.4
CDS CCA 72 bp CTCAAACACGAGTCTTTCCCTTTTGCTGACATTCTCTaGGGAGAAGGCAAATACTGTGTAGTGGATTCCGAA +
Preference number: 6 (lower is better)
Translates to: LKHESFPFADIL*GEGKYCVVDSE
Trigger: TTCGGAATCCACTACACAGTATTTGCCTTCTCCCCAGAGAATGTCAGCAAAAGGGAAAGACTCGTGTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304166.9
ENST00000396211.6
ENST00000409363.5
ENST00000409489.5
ENST00000436116.1
ENST00000614107.4