RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADCYAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000141433

Ensembl transcript IDs: ENST00000269200.5, ENST00000450565.8, ENST00000579794.1, ENST00000581602.1

Found 271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCACCCAACCAGGGGGACAGAGCCCAGTTGAGTTAGGCTGGGATTaGAGCAGCCTGCCCCAGAGACTCACTGGGAAAGAATGCCCTTCA +
Preference number: 1 (lower is better)
Translates to: ATQPGGQSPVELGWD*SSLPQRLTGKECPS
Trigger: TGAAGGGCATTCTTTCCCAGTGAGTCTCTGGGGCAGGCTGCTTCAATCCCAGCCTAACTCAACTGGGCTCTGTCCCCCTGGTTGGGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR CCA 90 bp AAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTaGGGCAATCTCAAACCAGTCCATTTCCAGGGTCCTCCTCCTACC +
Preference number: 1 (lower is better)
Translates to: KSGPLGLDLPSASQT*GNLKPVHFQGPPPT
Trigger: GGTAGGAGGAGGACCCTGGAAATGGACTGGTTTGAGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR GCA 90 bp TTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTaGCCTCAGCTTCCCAGACCTGGGGCAATCTCAAACCAGTCCATT +
Preference number: 1 (lower is better)
Translates to: FPIPSAQSQDHWDWI*PQLPRPGAISNQSI
Trigger: AATGGACTGGTTTGAGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR GCA 90 bp TACACAGGACTCAGGCATAGACCGAATGCCTCTGTTTTCACTATTTaGAATGTGATCTCCTGGCAGCATCCATCCCGCCTGGGAATGCAA +
Preference number: 1 (lower is better)
Translates to: YTGLRHRPNASVFTI*NVISWQHPSRLGMQ
Trigger: TTGCATTCCCAGGCGGGATGGATGCTGCCAGGAGATCACATTGCAAATAGTGAAAACAGAGGCATTCGGTCTATGCCTGAGTCCTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR TCA 90 bp GACTCAGGCATAGACCGAATGCCTCTGTTTTCACTATTTGCAATGTaGTCTCCTGGCAGCATCCATCCCGCCTGGGAATGCAAATCCAAT +
Preference number: 1 (lower is better)
Translates to: DSGIDRMPLFSLFAM*SPGSIHPAWECKSN
Trigger: ATTGGATTTGCATTCCCAGGCGGGATGGATGCTGCCAGGAGATCACATTGCAAATAGTGAAAACAGAGGCATTCGGTCTATGCCTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR GCA 90 bp CAAACCAGTCCATTTCCAGGGTCCTCCTCCTACCACCTCAGGCTCTaGCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTG +
Preference number: 1 (lower is better)
Translates to: QTSPFPGSSSYHLRL*LFQYTSMSFTLFQL
Trigger: CAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGCCTGAGGTGGTAGGAGGAGGACCCTGGAAATGGACTGGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR TCA 90 bp TCCCGTGTCACATTGCCTGAGGAGACTGCGGAATTAAAGGAAGATTaGTCCTATACACAGGACTCAGGCATAGACCGAATGCCTCTGTTT +
Preference number: 1 (lower is better)
Translates to: SRVTLPEETAELKED*SYTQDSGIDRMPLF
Trigger: AAACAGAGGCATTCGGTCTATGCCTGAGTCCTGTGTATAGGATCAATCTTCCTTTAATTCCGCAGTCTCCTCAGGCAATGTGACACGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR CCA 90 bp TCTGTACAGTTCCTCAACTCTTCTCCTAGGGAGAGGCGTGAATTCTaGGGAGAAGCACAATTTGGATCGAGCTGTTGTTTTATCAGGAGA +
Preference number: 1 (lower is better)
Translates to: SVQFLNSSPRERREF*GEAQFGSSCCFIRR
Trigger: TCTCCTGATAAAACAACAGCTCGATCCAAATTGTGCTTCTCCCCAGAATTCACGCCTCTCCCTAGGAGAAGAGTTGAGGAACTGTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR TCA 90 bp AAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGCCTaGGGAGACTGCGGAATTAAAGGAAGATTGATCCTATACACAGGA +
Preference number: 1 (lower is better)
Translates to: KKGTKAANCIPCHIA*GDCGIKGRLILYTG
Trigger: TCCTGTGTATAGGATCAATCTTCCTTTAATTCCGCAGTCTCCTCAGGCAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR CCA 90 bp GAGAGGATCCTGGCCATTTCACAAGATGAGAAGCATGGACAGCACTaGAGAAAAACACATTGTACTTTGCATCCATTTCCAATACCCAGC +
Preference number: 1 (lower is better)
Translates to: ERILAISQDEKHGQH*RKTHCTLHPFPIPS
Trigger: GCTGGGTATTGGAAATGGATGCAAAGTACAATGTGTTTTTCTCCAGTGCTGTCCATGCTTCTCATCTTGTGAAATGGCCAGGATCCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR TCA 90 bp TACAGAGCAGGTTTCAAAGGAGAGGATCCTGGCCATTTCACAAGATaGGAAGCATGGACAGCACTGGAGAAAAACACATTGTACTTTGCA +
Preference number: 1 (lower is better)
Translates to: YRAGFKGEDPGHFTR*EAWTALEKNTLYFA
Trigger: TGCAAAGTACAATGTGTTTTTCTCCAGTGCTGTCCATGCTTCTCATCTTGTGAAATGGCCAGGATCCTCTCCTTTGAAACCTGCTCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR TCA 90 bp AAATTTGGGAGATTGGCTGGCTGGTTTGTCTGTTGCTGCTCGATCTaGTTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTCTGTA +
Preference number: 1 (lower is better)
Translates to: KFGRLAGWFVCCCSI*LLGEGSFVYKDYSV
Trigger: TACAGAGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAACAGACAAACCAGCCAGCCAATCTCCCAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR CAA 90 bp ATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTaGCCCTCAGCTTCCCAGACCTGGGGCAATCTCAAACCAGTCCAT +
Preference number: 2 (lower is better)
Translates to: ISNTQRPKSGPLGLD*PSASQTWGNLKPVH
Trigger: ATGGACTGGTTTGAGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR CAA 90 bp TACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATaGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTC +
Preference number: 2 (lower is better)
Translates to: YFASISNTQRPKSGP*GLDLPSASQTWGNL
Trigger: GAGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR TCA 90 bp CATTGTACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGAGTTAGGCTGGGATTaGAGCAGCCTGCCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: HCTLHPFPIPSAQSQDHWELGWD*SSLPQR
Trigger: TCTCTGGGGCAGGCTGCTTCAATCCCAGCCTAACTC...CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR TCA 90 bp ATTCCCTGGCCACTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTCTGGGCTGAGAGTCTaGAGAGAGACAACTACACAT +
Preference number: 2 (lower is better)
Translates to: IPWPLRKYRKESGLTKPPSGLRV*RETTTH
Trigger: ATGTGTAGTTGTCTCTCTTCAGACTCTCAGCCCAGA...GGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAGTGGCCAGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR TCA 90 bp CATTGTACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGGGACAGAGCCCAGTTaGGTTAGGCTGGGATTGAAG +
Preference number: 2 (lower is better)
Translates to: HCTLHPFPIPSAQSQDHWGTEPS*VRLGLK
Trigger: CTTCAATCCCAGCCTAACTCAACTGGGCTCTGTCCC...CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR TCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGGAGTTAGGCTGGGATTaGAGCAGCCTGCCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: FKRRRKALKLQTASRVTLELGWD*SSLPQR
Trigger: TCTCTGGGGCAGGCTGCTTCAATCCCAGCCTAACTC...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR GCA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTAAAACGACTTTTCATTaGGTCAGGGCTGTATACACA +
Preference number: 2 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSKTTFH*VRAVYT
Trigger: TGTGTATACAGCCCTGACGCAATGAAAAGTCGTTTT...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR GCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGGGGATTGAAGCAGCCTaGCCCAGAGACTCACTGGGA +
Preference number: 2 (lower is better)
Translates to: FKRRRKALKLQTASRVTLGIEAA*PRDSLG
Trigger: TCCCAGTGAGTCTCTGGGGCAGGCTGCTTCAATCCC...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR TCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGGGGACAGAGCCCAGTTaGGTTAGGCTGGGATTGAAG +
Preference number: 2 (lower is better)
Translates to: FKRRRKALKLQTASRVTLGTEPS*VRLGLK
Trigger: CTTCAATCCCAGCCTAACTCAACTGGGCTCTGTCCC...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGCAGGACCATTGGGACTaGATTTGCCCTCAGCTTCCC +
Preference number: 2 (lower is better)
Translates to: FKRRRKALKLQTASRVTLQDHWD*ICPQLP
Trigger: GGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTG...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR CAA 90 bp CAAGATGAGAAGCATGGACAGCACTGGAGAAAAACACATTGTACTTaGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGG +
Preference number: 2 (lower is better)
Translates to: QDEKHGQHWRKTHCT*HPFPIPSAQSQDHW
Trigger: CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATGTGTTTTTCTCCAGTGCTGTCCATGCTTCTCATCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CCA 90 bp CATTGTACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGACCTCAAAATCTCCCTaGAGCAGGGCATCATTGTTT +
Preference number: 2 (lower is better)
Translates to: HCTLHPFPIPSAQSQDHWTSKSP*SRASLF
Trigger: AAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGT...CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR TCA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTAACGAGCGATGACTGTTaGGTCAGTTTGGAAAACGAC +
Preference number: 2 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALTSDDC*VSLEND
Trigger: GTCGTTTTCCAAACTGACTCAACAGTCATCGCTCGT...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR GCA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTACAGAAATATTGGAATTaGCACCCAACCAGGGGGACA +
Preference number: 2 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALQKYWN*HPTRGT
Trigger: TGTCCCCCTGGTTGGGTGGCAATTCCAATATTTCTG...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CCA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTGCCCCAGAGACTCACTaGGAAAGAATGCCCTTCAGC +
Preference number: 2 (lower is better)
Translates to: VAARSDCWVKVLLFIKITAPETH*ERMPFS
Trigger: GCTGAAGGGCATTCTTTCCCAGTGAGTCTCTGGGGC...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR GCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGCTCACTGGGAAAGAATaGCCTTCAGCAATTCTCCAT +
Preference number: 2 (lower is better)
Translates to: FKRRRKALKLQTASRVTLLTGKE*PSAILH
Trigger: ATGGAGAATTGCTGAAGGGCATTCTTTCCCAGTGAG...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR TCA 90 bp TTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTAGCAAATAGAACACACGAGCGATaGCTGTTGAGTCAGTTTGGA +
Preference number: 2 (lower is better)
Translates to: LPQNLPGAGHHCLCTVANRTHER*LLSQFG
Trigger: TCCAAACTGACTCAACAGTCATCGCTCGTGTGTTCT...ATTTGCTACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR TCA 90 bp CATTGTACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGTGTGCACGCTTTGTATaGACTTCTCTCTATACTTTA +
Preference number: 2 (lower is better)
Translates to: HCTLHPFPIPSAQSQDHWCARFV*TSLYTL
Trigger: TAAAGTATAGAGAGAAGTTCATACAAAGCGTGCACA...CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CCA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTAAGAAAGCAGAAATATTaGAATTGCCACCCAACCAGG +
Preference number: 2 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALRKQKY*NCHPTR
Trigger: CCTGGTTGGGTGGCAATTCCAATATTTCTGCTTTCT...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR TCA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTACGAGCGATGACTGTTaGGTCAGTTTGGAAAACGAC +
Preference number: 2 (lower is better)
Translates to: VAARSDCWVKVLLFIKITTSDDC*VSLEND
Trigger: GTCGTTTTCCAAACTGACTCAACAGTCATCGCTCGT...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR TCA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTTCTGGGCTGAGAGTCTaGAGAGAGACAACTACACAT +
Preference number: 2 (lower is better)
Translates to: VAARSDCWVKVLLFIKITSGLRV*RETTTH
Trigger: ATGTGTAGTTGTCTCTCTTCAGACTCTCAGCCCAGA...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CCA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTAGGGAGAAGCACAATTTaGATCGAGCTGTTGTTTTAT +
Preference number: 2 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALGRSTI*IELLFY
Trigger: ATAAAACAACAGCTCGATCCAAATTGTGCTTCTCCC...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR CAA 90 bp TCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTAATTaGGGGATATTAGATTCCCTGGCCACTCAGGAAGTACAGAAAAGA +
Preference number: 2 (lower is better)
Translates to: SNIPLCPSLCSNCPN*GILDSLATQEVQKR
Trigger: TCTTTTCTGTACTTCCTGAGTGGCCAGGGAATCTAATATCCCCAAATTAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR TCA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACAGAACACACGAGCGATaGCTGTTGAGTCAGTTTGGA +
Preference number: 2 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHRTHER*LLSQFG
Trigger: TCCAAACTGACTCAACAGTCATCGCTCGTGTGTTCT...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CCA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTCAAAGGAGAGGATCCTaGCCATTTCACAAGATGAGA +
Preference number: 2 (lower is better)
Translates to: VAARSDCWVKVLLFIKITQRRGS*PFHKMR
Trigger: TCTCATCTTGTGAAATGGCCAGGATCCTCTCCTTTG...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CCA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACCTTGTGCCTGAAATTTaGGAGATTGGCTGGCTGGTT +
Preference number: 2 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHLVPEI*EIGWLV
Trigger: AACCAGCCAGCCAATCTCCCAAATTTCAGGCACAAG...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR TCA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTAATTTTCTTCTGGGCTaGGAGTCTGAAGAGAGACAA +
Preference number: 2 (lower is better)
Translates to: VAARSDCWVKVLLFIKITNFLLG*ESEERQ
Trigger: TTGTCTCTCTTCAGACTCTCAGCCCAGAAGAAAATT...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CCA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTAGAAAGCAGAAATATTaGAATTGCCACCCAACCAGG +
Preference number: 2 (lower is better)
Translates to: VAARSDCWVKVLLFIKITRKQKY*NCHPTR
Trigger: CCTGGTTGGGTGGCAATTCCAATATTTCTGCTTTCT...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CCA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTAAGCATGGACAGCACTaGAGAAAAACACATTGTACT +
Preference number: 2 (lower is better)
Translates to: VAARSDCWVKVLLFIKITKHGQH*RKTHCT
Trigger: AGTACAATGTGTTTTTCTCCAGTGCTGTCCATGCTT...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CCA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACGCTCGATCTGATTGCTaGGTGAAGGTTCTTTTGTTT +
Preference number: 2 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHARSDC*VKVLLF
Trigger: AAACAAAAGAACCTTCACCCAGCAATCAGATCGAGC...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CCA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACGCCATCTGTGATTCGTaGCAATTTAAAAGGCGAAGA +
Preference number: 2 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHAICDS*QFKRRR
Trigger: TCTTCGCCTTTTAAATTGCCACGAATCACAGATGGC...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR CAA 90 bp GGTTTGTCTGTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTaGTTTATAAAGATTACTCTGTATGTTCAAAGAATTGACAGGAAA +
Preference number: 2 (lower is better)
Translates to: GLSVAARSDCWVKVL*FIKITLYVQRIDRK
Trigger: TTTCCTGTCAATTCTTTGAACATACAGAGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAACAGACAAACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR GCA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACAAAACGACTTTTCATTaGGTCAGGGCTGTATACACA +
Preference number: 2 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHKTTFH*VRAVYT
Trigger: TGTGTATACAGCCCTGACGCAATGAAAAGTCGTTTT...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR GCA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACAATTTTCAATCCTTGTaGACGCTTTGTATGAACTTC +
Preference number: 2 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHNFQSL*TLCMNF
Trigger: GAAGTTCATACAAAGCGTGCACAAGGATTGAAAATT...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR TCA 72 bp CCAGGGGGACAGAGCCCAGTTGAGTTAGGCTGGGATTaGAGCAGCCTGCCCCAGAGACTCACTGGGAAAGAA +
Preference number: 3 (lower is better)
Translates to: PGGQSPVELGWD*SSLPQRLTGKE
Trigger: TTCTTTCCCAGTGAGTCTCTGGGGCAGGCTGCTTCAATCCCAGCCTAACTCAACTGGGCTCTGTCCCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR GCA 72 bp CCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTaGCCTCAGCTTCCCAGACCTGGGGCAATCTCAAAC +
Preference number: 3 (lower is better)
Translates to: PSAQSQDHWDWI*PQLPRPGAISN
Trigger: GTTTGAGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR CCA 72 bp CCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTaGGGCAATCTCAAACCAGTCCATTTCCAGGGTCCT +
Preference number: 3 (lower is better)
Translates to: PLGLDLPSASQT*GNLKPVHFQGP
Trigger: AGGACCCTGGAAATGGACTGGTTTGAGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CAA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTGAAAACGACTTTTCATaGCGTCAGGGCTGTATACAC +
Preference number: 3 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAENDFS*RQGCIH
Trigger: GTGTATACAGCCCTGACGCAATGAAAAGTCGTTTTC...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR GCA 72 bp CCATTTCCAGGGTCCTCCTCCTACCACCTCAGGCTCTaGCTCTTCCAATATACCTCTATGTCCTTCACTTTG +
Preference number: 3 (lower is better)
Translates to: PFPGSSSYHLRL*LFQYTSMSFTL
Trigger: CAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGCCTGAGGTGGTAGGAGGAGGACCCTGGAAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CAA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTGCGAATTTTCAATCCTaGTGCACGCTTTGTATGAAC +
Preference number: 3 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAANFQS*CTLCMN
Trigger: GTTCATACAAAGCGTGCACAAGGATTGAAAATTCGC...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CAA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGCCATTGGGACTGGATTaGCCCTCAGCTTCCCAGACC +
Preference number: 3 (lower is better)
Translates to: FKRRRKALKLQTASRVTLPLGLD*PSASQT
Trigger: GGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGG...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR TCA 72 bp ATAGACCGAATGCCTCTGTTTTCACTATTTGCAATGTaGTCTCCTGGCAGCATCCATCCCGCCTGGGAATGC +
Preference number: 3 (lower is better)
Translates to: IDRMPLFSLFAM*SPGSIHPAWEC
Trigger: GCATTCCCAGGCGGGATGGATGCTGCCAGGAGATCACATTGCAAATAGTGAAAACAGAGGCATTCGGTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CAA 90 bp ATTCCCTGGCCACTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTACATAAATACATGTTaGGATAGAACACACGAGCGA +
Preference number: 3 (lower is better)
Translates to: IPWPLRKYRKESGLTKPPYINTC*DRTHER
Trigger: TCGCTCGTGTGTTCTATCCAAACATGTATTTATGTA...GGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAGTGGCCAGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CAA 90 bp CTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTTTTCTGTACAGGGGGAGAAGCACAATTaGGATCGAGCTGTTGTTTTA +
Preference number: 3 (lower is better)
Translates to: LRKYRKESGLTKPPFSVQGEKHN*DRAVVL
Trigger: TAAAACAACAGCTCGATCCAAATTGTGCTTCTCCCC...CTGTACAGAAAAGGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CAA 90 bp CATTGTACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGGGGAGAAGCACAATTaGGATCGAGCTGTTGTTTTA +
Preference number: 3 (lower is better)
Translates to: HCTLHPFPIPSAQSQDHWGEKHN*DRAVVL
Trigger: TAAAACAACAGCTCGATCCAAATTGTGCTTCTCCCC...CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR CCA 72 bp TTCCTCAACTCTTCTCCTAGGGAGAGGCGTGAATTCTaGGGAGAAGCACAATTTGGATCGAGCTGTTGTTTT +
Preference number: 3 (lower is better)
Translates to: FLNSSPRERREF*GEAQFGSSCCF
Trigger: AAAACAACAGCTCGATCCAAATTGTGCTTCTCCCCAGAATTCACGCCTCTCCCTAGGAGAAGAGTTGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR TCA 72 bp GGTTTCAAAGGAGAGGATCCTGGCCATTTCACAAGATaGGAAGCATGGACAGCACTGGAGAAAAACACATTG +
Preference number: 3 (lower is better)
Translates to: GFKGEDPGHFTR*EAWTALEKNTL
Trigger: CAATGTGTTTTTCTCCAGTGCTGTCCATGCTTCTCATCTTGTGAAATGGCCAGGATCCTCTCCTTTGAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR TCA 72 bp ACTAAAGCTGCAAACTGCATCCCGTGTCACATTGCCTaGGGAGACTGCGGAATTAAAGGAAGATTGATCCTA +
Preference number: 3 (lower is better)
Translates to: TKAANCIPCHIA*GDCGIKGRLIL
Trigger: TAGGATCAATCTTCCTTTAATTCCGCAGTCTCCTCAGGCAATGTGACACGGGATGCAGTTTGCAGCTTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CAA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGGAAAACGACTTTTCATaGCGTCAGGGCTGTATACAC +
Preference number: 3 (lower is better)
Translates to: FKRRRKALKLQTASRVTLENDFS*RQGCIH
Trigger: GTGTATACAGCCCTGACGCAATGAAAAGTCGTTTTC...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CAA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACCCAAAGTCAGGACCATaGGGACTGGATTTGCCCTCA +
Preference number: 3 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHPKSGP*GLDLPS
Trigger: TGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGG...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CAA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACAGGGTCTGTTGGAGCTaGCTTACCTCACTCTTGACC +
Preference number: 3 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHRVCWS*LTSLLT
Trigger: GGTCAAGAGTGAGGTAAGCAAGCTCCAACAGACCCT...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR TCA 72 bp AGATTGGCTGGCTGGTTTGTCTGTTGCTGCTCGATCTaGTTGCTGGGTGAAGGTTCTTTTGTTTATAAAGAT +
Preference number: 3 (lower is better)
Translates to: RLAGWFVCCCSI*LLGEGSFVYKD
Trigger: ATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAACAGACAAACCAGCCAGCCAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR GCA 72 bp TGGCTGGCTGGTTTGTCTGTTGCTGCTCGATCTGATTaGTGGGTGAAGGTTCTTTTGTTTATAAAGATTACT +
Preference number: 3 (lower is better)
Translates to: WLAGLSVAARSD*WVKVLLFIKIT
Trigger: AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAACAGACAAACCAGCCAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CAA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTAATCCTTGTGCACGCTTaGTATGAACTTCTCTCTATA +
Preference number: 3 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALILVHA*YELLSI
Trigger: TATAGAGAGAAGTTCATACAAAGCGTGCACAAGGAT...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CAA 90 bp CATATCTTTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTGCGAATTTTCAATCCTaGTGCACGCTTTGTATGAAC +
Preference number: 3 (lower is better)
Translates to: HIFTSKSPWSRASLFMYSANFQS*CTLCMN
Trigger: GTTCATACAAAGCGTGCACAAGGATTGAAAATTCGC...ACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAAAGATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CAA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGAAAACACATTGTACTTaGCATCCATTTCCAATACCC +
Preference number: 3 (lower is better)
Translates to: FKRRRKALKLQTASRVTLKTHCT*HPFPIP
Trigger: GGGTATTGGAAATGGATGCAAAGTACAATGTGTTTT...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CAA 90 bp CATATCTTTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTTACATAAATACATGTTaGGATAGAACACACGAGCGA +
Preference number: 3 (lower is better)
Translates to: HIFTSKSPWSRASLFMYSYINTC*DRTHER
Trigger: TCGCTCGTGTGTTCTATCCAAACATGTATTTATGTA...ACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAAAGATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CAA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACTGGAGCAGGGCATCATaGTTTATGTACAGTAGCAAA +
Preference number: 3 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHWSRAS*FMYSSK
Trigger: TTTGCTACTGTACATAAACAATGATGCCCTGCTCCA...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR-3UTR CAA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACCTCTGTTTTCACTATTaGCAATGTGATCTCCTGGCA +
Preference number: 3 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHLCFHY*QCDLLA
Trigger: TGCCAGGAGATCACATTGCAAATAGTGAAAACAGAG...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTCGGGCCACGAGCGACTaGAGGTGCTTCCCGGCGGAC +
Preference number: 4 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSARATSD*RCFPAD
Trigger: GTCCGCCGGGAAGCACCTGCAGTCGCTCGTGGCCCG...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTCGCTGCCAGGAGAGCTaGCAGGTAGGACGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSRCQES*QVGRRA
Trigger: TGCCCGCCGTCCTACCTGGCAGCTCTCCTGGCAGCG...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450565.8
CDS-3UTR TCA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTGAGGACACACAGCTGTaGGAACGCCCCTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSEDTQL*ERPWPP
Trigger: GGGAGGCCAGGGGCGTTCTCACAGCTGTGTGTCCTC...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS-3UTR CCA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTGAGTTGAACAGCACTTaGCGACAGCCGGTGCGCGCC +
Preference number: 4 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSELNST*RQPVRA
Trigger: GGCGCGCACCGGCTGTCGCCAAGTGCTGTTCAACTC...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS-3UTR TCA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTGAAGCCCCGGCTCCCTaGGTTGAACAGCACTTGGCG +
Preference number: 4 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAEAPAP*VEQHLA
Trigger: CGCCAAGTGCTGTTCAACTCAGGGAGCCGGGGCTTC...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS-3UTR CCA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTCGAGCCATCGAAGTCTaGCAGCGGGTTTCCGTCCTC +
Preference number: 4 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSRAIEV*QRVSVL
Trigger: GAGGACGGAAACCCGCTGCCAGACTTCGATGGCTCG...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTAAGATCCCGTCCGAGTaGCGCTTGGAGAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAKIPSE*RLESGS
Trigger: GGAGCCGCTCTCCAAGCGCCACTCGGACGGGATCTT...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTGGGATTGAAGCAGCCTaGCCCAGAGACTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSGIEAA*PRDSLG
Trigger: TCCCAGTGAGTCTCTGGGGCAGGCTGCTTCAATCCC...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTGAGTTAGGCTGGGATTaGAGCAGCCTGCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAELGWD*SSLPQR
Trigger: TCTCTGGGGCAGGCTGCTTCAATCCCAGCCTAACTC...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTTCAACTCCTCCCGCTaGCAGGAGAGCTGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAFNSSR*QESCQV
Trigger: TACCTGGCAGCTCTCCTGGCAGCGGGAGGAGTTGAA...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450565.8
CDS-3UTR GCA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTGGGATTGAAGCAGCCTaGCCCAGAGACTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAGIEAA*PRDSLG
Trigger: TCCCAGTGAGTCTCTGGGGCAGGCTGCTTCAATCCC...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp ATTCCCTGGCCACTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCAGCCGGTGCGCGCCCTaGCACTTCTTGCTTGCTATA +
Preference number: 4 (lower is better)
Translates to: IPWPLRKYRKESGLTKPPSRCAP*HFLLAI
Trigger: TATAGCAAGCAAGAAGTGGCAGGGCGCGCACCGGCT...GGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAGTGGCCAGGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS-3UTR CCA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTGGGAGATTGGCTGGCTaGTTTGTCTGTTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSGRLAG*FVCCCS
Trigger: CGAGCAGCAACAGACAAACCAGCCAGCCAATCTCCC...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR CAA 72 bp ACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTaGCCCTCAGCTTCCCAGACCTGGGGCAATCTCAAA +
Preference number: 4 (lower is better)
Translates to: TQRPKSGPLGLD*PSASQTWGNLK
Trigger: TTTGAGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp CATTGTACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGACGAGCGACTGCAGGTaGTTCCCGGCGGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: HCTLHPFPIPSAQSQDHWTSDCR*FPADSW
Trigger: CCAGCTGTCCGCCGGGAAGCACCTGCAGTCGCTCGT...CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGCGGGCCACGAGCGACTaGAGGTGCTTCCCGGCGGAC +
Preference number: 4 (lower is better)
Translates to: FKRRRKALKLQTASRVTLRATSD*RCFPAD
Trigger: GTCCGCCGGGAAGCACCTGCAGTCGCTCGTGGCCCG...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTCATTGGGACTGGATTTaGCCTCAGCTTCCCAGACCT +
Preference number: 4 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSHWDWI*PQLPRP
Trigger: AGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATG...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTCATCCCGTGTCACATTaGCTGAGGAGACTGCGGAAT +
Preference number: 4 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSHPVSH*LRRLRN
Trigger: ATTCCGCAGTCTCCTCAGGCAATGTGACACGGGATG...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp ATTCCCTGGCCACTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTCGTTAAGGATCCCGTaGGCGACATCTCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: IPWPLRKYRKESGLTKPPSLRIP*ATSLLP
Trigger: CGGGAGAAGAGATGTCGCCCACGGGATCCTTAACGA...GGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAGTGGCCAGGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTGCCCCAGAGACTCACTaGGAAAGAATGCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAAPETH*ERMPFS
Trigger: GCTGAAGGGCATTCTTTCCCAGTGAGTCTCTGGGGC...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTCAGGACCATTGGGACTaGATTTGCCCTCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAQDHWD*ICPQLP
Trigger: GGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTG...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR CAA 72 bp TCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATaGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGG +
Preference number: 4 (lower is better)
Translates to: SISNTQRPKSGP*GLDLPSASQTW
Trigger: CCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTTGTTGCTGCTCGATCTaGTTGCTGGGTGAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSCCCSI*LLGEGS
Trigger: AGAACCTTCACCCAGCAATCAGATCGAGCAGCAACA...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp ATTCCCTGGCCACTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCCATCCCGTGTCACATTaGCTGAGGAGACTGCGGAAT +
Preference number: 4 (lower is better)
Translates to: IPWPLRKYRKESGLTKPPHPVSH*LRRLRN
Trigger: ATTCCGCAGTCTCCTCAGGCAATGTGACACGGGATG...GGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAGTGGCCAGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp ATTCCCTGGCCACTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTCAGCTTCCCAGACCTaGGGCAATCTCAAACCAGTC +
Preference number: 4 (lower is better)
Translates to: IPWPLRKYRKESGLTKPPSASQT*GNLKPV
Trigger: GACTGGTTTGAGATTGCCCCAGGTCTGGGAAGCTGA...GGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAGTGGCCAGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTAGGCTGTAGCTGTCCGTaGAGATCCCGTCCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALGCSCP*RSRPSG
Trigger: GCCACTCGGACGGGATCTTCACGGACAGCTACAGCC...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTACGAGCGATGACTGTTaGGTCAGTTTGGAAAACGAC +
Preference number: 4 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSATSDDC*VSLEND
Trigger: GTCGTTTTCCAAACTGACTCAACAGTCATCGCTCGT...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTACAGTACTTAAACAGTaGAGGAGGGTAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSTVLKQ*RRVGRR
Trigger: TCTCCTTCCTACCCTCCTGCACTGTTTAAGTACTGT...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTGCAAGCTGATGTGTTaGAGCATTGTAGGGCCACTA +
Preference number: 4 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSACKLMC*SIVGPL
Trigger: TAGTGGCCCTACAATGCTGCAACACATCAGCTTGCA...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGAAGATCCCGTCCGAGTaGCGCTTGGAGAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: FKRRRKALKLQTASRVTLKIPSE*RLESGS
Trigger: GGAGCCGCTCTCCAAGCGCCACTCGGACGGGATCTT...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTAGTACGCCTCTTCCTCTaGCCTGATCCCGGGGAACCG +
Preference number: 4 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALVRLFL*PDPGEP
Trigger: CGGTTCCCCGGGATCAGGCCAGAGGAAGAGGCGTAC...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp CTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTTTTCTGTACAGCAGGACCATTGGGACTaGATTTGCCCTCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LRKYRKESGLTKPPFSVQQDHWD*ICPQLP
Trigger: GGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTG...CTGTACAGAAAAGGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTTCCGGCGGCGGCAGGTaGGCTGTAGACGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: VAARSDCWVKVLLFIKITSGGGR*AVDAAV
Trigger: CACAGCAGCGTCTACAGCTCACCTGCCGCCGCCGGA...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTAATTTTCTTCTGGGCTaGGAGTCTGAAGAGAGACAA +
Preference number: 4 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSNFLLG*ESEERQ
Trigger: TTGTCTCTCTTCAGACTCTCAGCCCAGAAGAAAATT...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTCTCACTGGGAAAGAATaGCCTTCAGCAATTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSALTGKE*PSAILH
Trigger: ATGGAGAATTGCTGAAGGGCATTCTTTCCCAGTGAG...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp CTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTTTTCTGTACAGCATTGGGACTGGATTTaGCCTCAGCTTCCCAGACCT +
Preference number: 4 (lower is better)
Translates to: LRKYRKESGLTKPPFSVQHWDWI*PQLPRP
Trigger: AGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATG...CTGTACAGAAAAGGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp CATATCTTTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTCTTGGCGACAGCCGGTaGGCGCCCTGCCACTTCTTG +
Preference number: 4 (lower is better)
Translates to: HIFTSKSPWSRASLFMYSLGDSR*APCHFL
Trigger: CAAGAAGTGGCAGGGCGCGCACCGGCTGTCGCCAAG...ACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAAAGATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS-3UTR CCA 90 bp CATTGTACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGTCGTTAAGGATCCCGTaGGCGACATCTCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: HCTLHPFPIPSAQSQDHWSLRIP*ATSLLP
Trigger: CGGGAGAAGAGATGTCGCCCACGGGATCCTTAACGA...CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTAGAAAGCAGAAATATTaGAATTGCCACCCAACCAGG +
Preference number: 4 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSRKQKY*NCHPTR
Trigger: CCTGGTTGGGTGGCAATTCCAATATTTCTGCTTTCT...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp CATTGTACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGTGCAATGTGATCTCCTaGCAGCATCCATCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: HCTLHPFPIPSAQSQDHWCNVIS*QHPSRL
Trigger: CAGGCGGGATGGATGCTGCCAGGAGATCACATTGCA...CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTGCCATCTGTGATTCGTaGCAATTTAAAAGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSAICDS*QFKRRR
Trigger: TCTTCGCCTTTTAAATTGCCACGAATCACAGATGGC...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACTCCGGCGGCGGCAGGTaGGCTGTAGACGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHSGGGR*AVDAAV
Trigger: CACAGCAGCGTCTACAGCTCACCTGCCGCCGCCGGA...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp TTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTAGCAAATCCCGGCTCCCTGAGTTaGACAGCACTTGGCGACAGC +
Preference number: 4 (lower is better)
Translates to: LPQNLPGAGHHCLCTVANPGSLS*TALGDS
Trigger: GCTGTCGCCAAGTGCTGTTCAACTCAGGGAGCCGGG...ATTTGCTACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS-3UTR GCA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTACGAGCGACTGCAGGTaGTTCCCGGCGGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: VAARSDCWVKVLLFIKITTSDCR*FPADSW
Trigger: CCAGCTGTCCGCCGGGAAGCACCTGCAGTCGCTCGT...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACCGTCCGAGTGGCGCTTaGAGAGCGGCTCCGCGTCGT +
Preference number: 4 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHRPSGA*RAAPRR
Trigger: ACGACGCGGAGCCGCTCTCCAAGCGCCACTCGGACG...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTGGGAGAAGCACAATTTaGATCGAGCTGTTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSGRSTI*IELLFY
Trigger: ATAAAACAACAGCTCGATCCAAATTGTGCTTCTCCC...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTGCTCGATCTGATTGCTaGGTGAAGGTTCTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAARSDC*VKVLLF
Trigger: AAACAAAAGAACCTTCACCCAGCAATCAGATCGAGC...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTGGCTGTAGCTGTCCGTaGAGATCCCGTCCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: VAARSDCWVKVLLFIKITGCSCP*RSRPSG
Trigger: GCCACTCGGACGGGATCTTCACGGACAGCTACAGCC...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTAGGGACAGAGCCCAGTTaGGTTAGGCTGGGATTGAAG +
Preference number: 4 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALGTEPS*VRLGLK
Trigger: CTTCAATCCCAGCCTAACTCAACTGGGCTCTGTCCC...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTTTCACCACTAACAGCTaGTACAAATACAGAAAACTC +
Preference number: 4 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSFTTNS*YKYRKL
Trigger: GAGTTTTCTGTATTTGTATCAGCTGTTAGTGGTGAA...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp CTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTTTTCTGTACAGACTAAAGCTGCAAACTaGATCCCGTGTCACATTGCC +
Preference number: 4 (lower is better)
Translates to: LRKYRKESGLTKPPFSVQTKAAN*IPCHIA
Trigger: GGCAATGTGACACGGGATGCAGTTTGCAGCTTTAGT...CTGTACAGAAAAGGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGGCCCCAGAGACTCACTaGGAAAGAATGCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: FKRRRKALKLQTASRVTLAPETH*ERMPFS
Trigger: GCTGAAGGGCATTCTTTCCCAGTGAGTCTCTGGGGC...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp CTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTTTTCTGTACAGGAGAGGCGTGAATTCTaGGGAGAAGCACAATTTGGA +
Preference number: 4 (lower is better)
Translates to: LRKYRKESGLTKPPFSVQERREF*GEAQFG
Trigger: TCCAAATTGTGCTTCTCCCCAGAATTCACGCCTCTC...CTGTACAGAAAAGGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp CATTGTACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGCAAAGTCAGGACCATTaGGACTGGATTTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: HCTLHPFPIPSAQSQDHWQSQDH*DWICPQ
Trigger: CTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTG...CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTAAGCATGGACAGCACTaGAGAAAAACACATTGTACT +
Preference number: 4 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAKHGQH*RKTHCT
Trigger: AGTACAATGTGTTTTTCTCCAGTGCTGTCCATGCTT...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp CTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTTTTCTGTACAGATTTGGGAGATTGGCTaGCTGGTTTGTCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LRKYRKESGLTKPPFSVQIWEIG*LVCLLL
Trigger: CAGCAACAGACAAACCAGCCAGCCAATCTCCCAAAT...CTGTACAGAAAAGGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp CTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTTTTCTGTACAGAGCATCCATCCCGCCTaGGAATGCAAATCCAATTCT +
Preference number: 4 (lower is better)
Translates to: LRKYRKESGLTKPPFSVQSIHPA*ECKSNS
Trigger: AGAATTGGATTTGCATTCCCAGGCGGGATGGATGCT...CTGTACAGAAAAGGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGTGCAATGTGATCTCCTaGCAGCATCCATCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: FKRRRKALKLQTASRVTLCNVIS*QHPSRL
Trigger: CAGGCGGGATGGATGCTGCCAGGAGATCACATTGCA...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGTCGCTCCGCTACACATaGTCATTCTGCGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: FKRRRKALKLQTASRVTLSLRYT*SFCAGW
Trigger: CCATCCTGCGCAGAATGACCATGTGTAGCGGAGCGA...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS-3UTR TCA 90 bp CATTGTACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGACGAGCGATGACTGTTaGGTCAGTTTGGAAAACGAC +
Preference number: 4 (lower is better)
Translates to: HCTLHPFPIPSAQSQDHWTSDDC*VSLEND
Trigger: GTCGTTTTCCAAACTGACTCAACAGTCATCGCTCGT...CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp CATTGTACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGAGAACACACGAGCGATaGCTGTTGAGTCAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: HCTLHPFPIPSAQSQDHWRTHER*LLSQFG
Trigger: TCCAAACTGACTCAACAGTCATCGCTCGTGTGTTCT...CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTGTGCACGCTTTGTATaGACTTCTCTCTATACTTTA +
Preference number: 4 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSACARFV*TSLYTL
Trigger: TAAAGTATAGAGAGAAGTTCATACAAAGCGTGCACA...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTGTATGTTCAAAGAATTaGCAGGAAACAGACATGCTT +
Preference number: 4 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAVCSKN*QETDML
Trigger: AAGCATGTCTGTTTCCTGTCAATTCTTTGAACATAC...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp CATATCTTTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTCTAGCCAGACCCGGCTaGAGGAAAGCTAACTCCCCT +
Preference number: 4 (lower is better)
Translates to: HIFTSKSPWSRASLFMYSLARPG*RKANSP
Trigger: AGGGGAGTTAGCTTTCCTTCAGCCGGGTCTGGCTAG...ACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAAAGATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS-3UTR GCA 90 bp CATTGTACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGTACCACCTCAGGCTCTaGCTCTTCCAATATACCTCT +
Preference number: 4 (lower is better)
Translates to: HCTLHPFPIPSAQSQDHWYHLRL*LFQYTS
Trigger: AGAGGTATATTGGAAGAGGCAGAGCCTGAGGTGGTA...CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp CTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTTTTCTGTACAGCATCCCGCCTGGGAATaGAAATCCAATTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LRKYRKESGLTKPPFSVQHPAWE*KSNSVF
Trigger: GAAAACAGAATTGGATTTGCATTCCCAGGCGGGATG...CTGTACAGAAAAGGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTCGAGCCATCGAAGTCTaGCAGCGGGTTTCCGTCCTC +
Preference number: 4 (lower is better)
Translates to: VAARSDCWVKVLLFIKITRAIEV*QRVSVL
Trigger: GAGGACGGAAACCCGCTGCCAGACTTCGATGGCTCG...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp TTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTAGCAAATAGAGGCATCGCCGTCTaGCGTTGGTGTCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LPQNLPGAGHHCLCTVANRGIAV*RWCLSR
Trigger: TCTGCTCAGACACCAACGCCAGACGGCGATGCCTCT...ATTTGCTACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450565.8
CDS-3UTR CCA 90 bp TTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTAGCAAATTTCAAGTTCCTGCGCTaGAGTCACCACCCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LPQNLPGAGHHCLCTVANFKFLR*SHHPRG
Trigger: GCCTCTCGGGTGGTGACTCCAGCGCAGGAACTTGAA...ATTTGCTACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450565.8
CDS-3UTR CCA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACGTACGCCTCTTCCTCTaGCCTGATCCCGGGGAACCG +
Preference number: 4 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHVRLFL*PDPGEP
Trigger: CGGTTCCCCGGGATCAGGCCAGAGGAAGAGGCGTAC...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp CTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTTTTCTGTACAGACCTCAAAATCTCCCTaGAGCAGGGCATCATTGTTT +
Preference number: 4 (lower is better)
Translates to: LRKYRKESGLTKPPFSVQTSKSP*SRASLF
Trigger: AAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGT...CTGTACAGAAAAGGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTATCAGCTTCCCAGACCTaGGGCAATCTCAAACCAGTC +
Preference number: 4 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALSASQT*GNLKPV
Trigger: GACTGGTTTGAGATTGCCCCAGGTCTGGGAAGCTGA...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTGAGTTAGGCTGGGATTaGAGCAGCCTGCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VAARSDCWVKVLLFIKITELGWD*SSLPQR
Trigger: TCTCTGGGGCAGGCTGCTTCAATCCCAGCCTAACTC...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTATGTTGCTGCTCGATCTaGTTGCTGGGTGAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALCCCSI*LLGEGS
Trigger: AGAACCTTCACCCAGCAATCAGATCGAGCAGCAACA...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTAATTTTCAATCCTTGTaGACGCTTTGTATGAACTTC +
Preference number: 4 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSANFQSL*TLCMNF
Trigger: GAAGTTCATACAAAGCGTGCACAAGGATTGAAAATT...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTAAAAATATATATATATaGATCTACCCGGCGCCCAAT +
Preference number: 4 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAKNIYI*IYPAPN
Trigger: ATTGGGCGCCGGGTAGATGCATATATATATATTTTT...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS-3UTR CCA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACATCGCCGTCTGGCGTTaGTGTCTGAGCAGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHIAVWR*CLSRSR
Trigger: GCGGCTTCTGCTCAGACACCAACGCCAGACGGCGAT...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450565.8
CDS-3UTR CCA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTACAAAGTCAGGACCATTaGGACTGGATTTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALQSQDH*DWICPQ
Trigger: CTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTG...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp CATTGTACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGCAAAGGAGAGGATCCTaGCCATTTCACAAGATGAGA +
Preference number: 4 (lower is better)
Translates to: HCTLHPFPIPSAQSQDHWQRRGS*PFHKMR
Trigger: TCTCATCTTGTGAAATGGCCAGGATCCTCTCCTTTG...CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGGTTCTCAGGGTCTGTTaGAGCTTGCTTACCTCACTC +
Preference number: 4 (lower is better)
Translates to: FKRRRKALKLQTASRVTLVLRVC*SLLTSL
Trigger: GAGTGAGGTAAGCAAGCTCCAACAGACCCTGAGAAC...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTAGTTCTCAGGGTCTGTTaGAGCTTGCTTACCTCACTC +
Preference number: 4 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALVLRVC*SLLTSL
Trigger: GAGTGAGGTAAGCAAGCTCCAACAGACCCTGAGAAC...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp CATATCTTTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTGGGAGATTGGCTGGCTaGTTTGTCTGTTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: HIFTSKSPWSRASLFMYSGRLAG*FVCCCS
Trigger: CGAGCAGCAACAGACAAACCAGCCAGCCAATCTCCC...ACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAAAGATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTATCATTCTGCGCAGGATaGGAAAGAGGACACACAGCT +
Preference number: 4 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALSFCAG*ERGHTA
Trigger: AGCTGTGTGTCCTCTTTCCCATCCTGCGCAGAATGA...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS-3UTR TCA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTACCGCCAAGTATTTCTTaGCAGCCATTTGTTTCCGGT +
Preference number: 4 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALPPSIS*QPFVSG
Trigger: ACCGGAAACAAATGGCTGTCAAGAAATACTTGGCGG...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTGGGACAGAGCCCAGTTaGGTTAGGCTGGGATTGAAG +
Preference number: 4 (lower is better)
Translates to: VAARSDCWVKVLLFIKITGTEPS*VRLGLK
Trigger: CTTCAATCCCAGCCTAACTCAACTGGGCTCTGTCCC...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTATCTGGGCTGAGAGTCTaGAGAGAGACAACTACACAT +
Preference number: 4 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALSGLRV*RETTTH
Trigger: ATGTGTAGTTGTCTCTCTTCAGACTCTCAGCCCAGA...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGTCTGGGCTGAGAGTCTaGAGAGAGACAACTACACAT +
Preference number: 4 (lower is better)
Translates to: FKRRRKALKLQTASRVTLSGLRV*RETTTH
Trigger: ATGTGTAGTTGTCTCTCTTCAGACTCTCAGCCCAGA...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp CTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTTTTCTGTACAGAAAACGACTTTTCATTaGGTCAGGGCTGTATACACA +
Preference number: 4 (lower is better)
Translates to: LRKYRKESGLTKPPFSVQKTTFH*VRAVYT
Trigger: TGTGTATACAGCCCTGACGCAATGAAAAGTCGTTTT...CTGTACAGAAAAGGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGCAGAAATATTGGAATTaGCACCCAACCAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: FKRRRKALKLQTASRVTLQKYWN*HPTRGT
Trigger: TGTCCCCCTGGTTGGGTGGCAATTCCAATATTTCTG...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTATACCACCTCAGGCTCTaGCTCTTCCAATATACCTCT +
Preference number: 4 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALYHLRL*LFQYTS
Trigger: AGAGGTATATTGGAAGAGGCAGAGCCTGAGGTGGTA...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGGCTGCTCGATCTGATTaGTGGGTGAAGGTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: FKRRRKALKLQTASRVTLAARSD*WVKVLL
Trigger: CAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGC...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTAACTAAAGCTGCAAACTaGATCCCGTGTCACATTGCC +
Preference number: 4 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALTKAAN*IPCHIA
Trigger: GGCAATGTGACACGGGATGCAGTTTGCAGCTTTAGT...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGTGCAAGCTGATGTGTTaGAGCATTGTAGGGCCACTA +
Preference number: 4 (lower is better)
Translates to: FKRRRKALKLQTASRVTLCKLMC*SIVGPL
Trigger: TAGTGGCCCTACAATGCTGCAACACATCAGCTTGCA...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGTACACATGGTCATTCTaGGCAGGATGGGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: FKRRRKALKLQTASRVTLYTWSF*AGWERG
Trigger: TCCTCTTTCCCATCCTGCGCAGAATGACCATGTGTA...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS-3UTR CCA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTAATTTGGGAGATTGGCTaGCTGGTTTGTCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALIWEIG*LVCLLL
Trigger: CAGCAACAGACAAACCAGCCAGCCAATCTCCCAAAT...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGCTTGTGCCTGAAATTTaGGAGATTGGCTGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: FKRRRKALKLQTASRVTLLVPEI*EIGWLV
Trigger: AACCAGCCAGCCAATCTCCCAAATTTCAGGCACAAG...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGAGCATCCATCCCGCCTaGGAATGCAAATCCAATTCT +
Preference number: 4 (lower is better)
Translates to: FKRRRKALKLQTASRVTLSIHPA*ECKSNS
Trigger: AGAATTGGATTTGCATTCCCAGGCGGGATGGATGCT...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp CATTGTACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGCCATCTGTGATTCGTaGCAATTTAAAAGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: HCTLHPFPIPSAQSQDHWAICDS*QFKRRR
Trigger: TCTTCGCCTTTTAAATTGCCACGAATCACAGATGGC...CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR CAA 72 bp AAGCATGGACAGCACTGGAGAAAAACACATTGTACTTaGCATCCATTTCCAATACCCAGCGCCCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: KHGQHWRKTHCT*HPFPIPSAQSQ
Trigger: CTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATGTGTTTTTCTCCAGTGCTGTCCATGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp TTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTAGCAAATAGACGCTGCTGTGCATaGTTATCCCATAGACCAGCA +
Preference number: 4 (lower is better)
Translates to: LPQNLPGAGHHCLCTVANRRCCA*LSHRPA
Trigger: TGCTGGTCTATGGGATAATCATGCACAGCAGCGTCT...ATTTGCTACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp TTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTAGCAAATGGCCATTTCACAAGATaGGAAGCATGGACAGCACTG +
Preference number: 4 (lower is better)
Translates to: LPQNLPGAGHHCLCTVANGHFTR*EAWTAL
Trigger: CAGTGCTGTCCATGCTTCTCATCTTGTGAAATGGCC...ATTTGCTACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp TTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTAGCAAATCCGTGTCACATTGCCTaGGGAGACTGCGGAATTAAA +
Preference number: 4 (lower is better)
Translates to: LPQNLPGAGHHCLCTVANPCHIA*GDCGIK
Trigger: TTTAATTCCGCAGTCTCCTCAGGCAATGTGACACGG...ATTTGCTACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp CATATCTTTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTCCGTGTCACATTGCCTaGGGAGACTGCGGAATTAAA +
Preference number: 4 (lower is better)
Translates to: HIFTSKSPWSRASLFMYSPCHIA*GDCGIK
Trigger: TTTAATTCCGCAGTCTCCTCAGGCAATGTGACACGG...ACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAAAGATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp TTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTAGCAAATTCGCTCCGCTACACATaGTCATTCCTTCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: LPQNLPGAGHHCLCTVANSLRYT*SFLQLL
Trigger: GAGGAGTTGAAGGAATGACCATGTGTAGCGGAGCGA...ATTTGCTACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450565.8
CDS-3UTR CCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGCAAAGGAGAGGATCCTaGCCATTTCACAAGATGAGA +
Preference number: 4 (lower is better)
Translates to: FKRRRKALKLQTASRVTLQRRGS*PFHKMR
Trigger: TCTCATCTTGTGAAATGGCCAGGATCCTCTCCTTTG...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
3UTR CAA 72 bp CCTCTATGTCCTTCACTTTGTTCCAATTGCCCTAATTaGGGGATATTAGATTCCCTGGCCACTCAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: PLCPSLCSNCPN*GILDSLATQEV
Trigger: TACTTCCTGAGTGGCCAGGGAATCTAATATCCCCAAATTAGGGCAATTGGAACAAAGTGAAGGACATAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp CTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTTTTCTGTACAGAATTTTCAATCCTTGTaGACGCTTTGTATGAACTTC +
Preference number: 4 (lower is better)
Translates to: LRKYRKESGLTKPPFSVQNFQSL*TLCMNF
Trigger: GAAGTTCATACAAAGCGTGCACAAGGATTGAAAATT...CTGTACAGAAAAGGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp TTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTAGCAAATCAGAAATATTGGAATTaGCACCCAACCAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: LPQNLPGAGHHCLCTVANQKYWN*HPTRGT
Trigger: TGTCCCCCTGGTTGGGTGGCAATTCCAATATTTCTG...ATTTGCTACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp TTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTAGCAAATGCTGCTCGATCTGATTaGTGGGTGAAGGTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LPQNLPGAGHHCLCTVANAARSD*WVKVLL
Trigger: CAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGC...ATTTGCTACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGAGAAAGCAGAAATATTaGAATTGCCACCCAACCAGG +
Preference number: 4 (lower is better)
Translates to: FKRRRKALKLQTASRVTLRKQKY*NCHPTR
Trigger: CCTGGTTGGGTGGCAATTCCAATATTTCTGCTTTCT...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp CATATCTTTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTGAGAGGCGTGAATTCTaGGGAGAAGCACAATTTGGA +
Preference number: 4 (lower is better)
Translates to: HIFTSKSPWSRASLFMYSERREF*GEAQFG
Trigger: TCCAAATTGTGCTTCTCCCCAGAATTCACGCCTCTC...ACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAAAGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp CATATCTTTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTCTTGTGCCTGAAATTTaGGAGATTGGCTGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: HIFTSKSPWSRASLFMYSLVPEI*EIGWLV
Trigger: AACCAGCCAGCCAATCTCCCAAATTTCAGGCACAAG...ACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAAAGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTCCGCCAAGTATTTCTTaGCAGCCATTTGTTTCCGGT +
Preference number: 4 (lower is better)
Translates to: VAARSDCWVKVLLFIKITPPSIS*QPFVSG
Trigger: ACCGGAAACAAATGGCTGTCAAGAAATACTTGGCGG...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACGGCCATTTCACAAGATaGGAAGCATGGACAGCACTG +
Preference number: 4 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHGHFTR*EAWTAL
Trigger: CAGTGCTGTCCATGCTTCTCATCTTGTGAAATGGCC...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp TTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTAGCAAATACAGTACTTAAACAGTaGAGGAGGGTAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LPQNLPGAGHHCLCTVANTVLKQ*RRVGRR
Trigger: TCTCCTTCCTACCCTCCTGCACTGTTTAAGTACTGT...ATTTGCTACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTATCTGTTTTCACTATTTaGAATGTGATCTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALSVFTI*NVISWQ
Trigger: CTGCCAGGAGATCACATTGCAAATAGTGAAAACAGA...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp TTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTAGCAAATGTGATCACTGTAAAATaGTTGCAACTAGCCACGGGA +
Preference number: 4 (lower is better)
Translates to: LPQNLPGAGHHCLCTVANVITVK*LQLATG
Trigger: TCCCGTGGCTAGTTGCAAGCATTTTACAGTGATCAC...ATTTGCTACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp CATATCTTTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTGTGATCACTGTAAAATaGTTGCAACTAGCCACGGGA +
Preference number: 4 (lower is better)
Translates to: HIFTSKSPWSRASLFMYSVITVK*LQLATG
Trigger: TCCCGTGGCTAGTTGCAAGCATTTTACAGTGATCAC...ACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAAAGATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGGTATGTTCAAAGAATTaGCAGGAAACAGACATGCTT +
Preference number: 4 (lower is better)
Translates to: FKRRRKALKLQTASRVTLVCSKN*QETDML
Trigger: AAGCATGTCTGTTTCCTGTCAATTCTTTGAACATAC...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTTCACTATTTGCAATGTaGTCTCCTGGCAGCATCCAT +
Preference number: 4 (lower is better)
Translates to: VAARSDCWVKVLLFIKITSLFAM*SPGSIH
Trigger: ATGGATGCTGCCAGGAGATCACATTGCAAATAGTGA...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGTTCACCACTAACAGCTaGTACAAATACAGAAAACTC +
Preference number: 4 (lower is better)
Translates to: FKRRRKALKLQTASRVTLFTTNS*YKYRKL
Trigger: GAGTTTTCTGTATTTGTATCAGCTGTTAGTGGTGAA...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp CATATCTTTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTAAAACGACTTTTCATTaGGTCAGGGCTGTATACACA +
Preference number: 4 (lower is better)
Translates to: HIFTSKSPWSRASLFMYSKTTFH*VRAVYT
Trigger: TGTGTATACAGCCCTGACGCAATGAAAAGTCGTTTT...ACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAAAGATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACCATCCCGCCTGGGAATaGAAATCCAATTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHHPAWE*KSNSVF
Trigger: GAAAACAGAATTGGATTTGCATTCCCAGGCGGGATG...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR GCA 90 bp CATATCTTTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTTCTGTTTTCACTATTTaGAATGTGATCTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: HIFTSKSPWSRASLFMYSSVFTI*NVISWQ
Trigger: CTGCCAGGAGATCACATTGCAAATAGTGAAAACAGA...ACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAAAGATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACACCTCAAAATCTCCCTaGAGCAGGGCATCATTGTTT +
Preference number: 4 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHTSKSP*SRASLF
Trigger: AAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGT...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp CATATCTTTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTAAGCATGGACAGCACTaGAGAAAAACACATTGTACT +
Preference number: 4 (lower is better)
Translates to: HIFTSKSPWSRASLFMYSKHGQH*RKTHCT
Trigger: AGTACAATGTGTTTTTCTCCAGTGCTGTCCATGCTT...ACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAAAGATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CCA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTGCTCGATCTGATTGCTaGGTGAAGGTTCTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: VAARSDCWVKVLLFIKITARSDC*VKVLLF
Trigger: AAACAAAAGAACCTTCACCCAGCAATCAGATCGAGC...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR TCA 90 bp TTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTAGCAAATTGTGCACGCTTTGTATaGACTTCTCTCTATACTTTA +
Preference number: 4 (lower is better)
Translates to: LPQNLPGAGHHCLCTVANCARFV*TSLYTL
Trigger: TAAAGTATAGAGAGAAGTTCATACAAAGCGTGCACA...ATTTGCTACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS GCA 90 bp GCGGTACCAGGCGGCGGCGGCGCGCGGCGCGGAGGCGGGGCTCCCTaGGCCCGGCGGCTCCGAGCCATCGAAGTCTGGCAGCGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: AVPGGGGARRGGGAP*ARRLRAIEVWQRVS
Trigger: GGAAACCCGCTGCCAGACTTCGATGGCTCGGAGCCGCCGGGCGCAGGGAGCCCCGCCTCCGCGCCGCGCGCCGCCGCCGCCTGGTACCGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269200.5
ENST00000450565.8
ENST00000579794.1
CDS CCA 90 bp GGAGGCGGGGCTCCCTGCGCCCGGCGGCTCCGAGCCATCGAAGTCTaGCAGCGGGTTTCCGTCCTCGCCGTACGCCTCTTCCTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: GGGAPCARRLRAIEV*QRVSVLAVRLFLWP
Trigger: AGGCCAGAGGAAGAGGCGTACGGCGAGGACGGAAACCCGCTGCCAGACTTCGATGGCTCGGAGCCGCCGGGCGCAGGGAGCCCCGCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269200.5
ENST00000450565.8
ENST00000579794.1
CDS TCA 90 bp CTGGAAGCCGGGGGAGGGACGGAGCGAAGCCCCGGCTCCCTGAGTTaGACAGCACTTGGCGACAGCCGGTGCGCGCCCTGCCACTTCTTG +
Preference number: 5 (lower is better)
Translates to: LEAGGGTERSPGSLS*TALGDSRCAPCHFL
Trigger: CAAGAAGTGGCAGGGCGCGCACCGGCTGTCGCCAAGTGCTGTTCAACTCAGGGAGCCGGGGCTTCGCTCCGTCCCTCCCCCGGCTTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS TCA 90 bp AAGCTCTGGAAGCCGGGGGAGGGACGGAGCGAAGCCCCGGCTCCCTaGGTTGAACAGCACTTGGCGACAGCCGGTGCGCGCCCTGCCACT +
Preference number: 5 (lower is better)
Translates to: KLWKPGEGRSEAPAP*VEQHLATAGARPAT
Trigger: AGTGGCAGGGCGCGCACCGGCTGTCGCCAAGTGCTGTTCAACTCAGGGAGCCGGGGCTTCGCTCCGTCCCTCCCCCGGCTTCCAGAGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS CCA 90 bp GGGAGGGACGGAGCGAAGCCCCGGCTCCCTGAGTTGAACAGCACTTaGCGACAGCCGGTGCGCGCCCTGCCACTTCTTGCTTGCTATAGT +
Preference number: 5 (lower is better)
Translates to: GRDGAKPRLPELNST*RQPVRALPLLACYS
Trigger: ACTATAGCAAGCAAGAAGTGGCAGGGCGCGCACCGGCTGTCGCCAAGTGCTGTTCAACTCAGGGAGCCGGGGCTTCGCTCCGTCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS TCA 90 bp ACCGGAGTCCGGCGGCGGCAGGTGAGCTGTAGACGCTGCTGTGCATaGTTATCCCATAGACCAGCAGGGCCAGCCTCGCTCCGCTACACA +
Preference number: 5 (lower is better)
Translates to: TGVRRRQVSCRRCCA*LSHRPAGPASLRYT
Trigger: TGTGTAGCGGAGCGAGGCTGGCCCTGCTGGTCTATGGGATAATCATGCACAGCAGCGTCTACAGCTCACCTGCCGCCGCCGGACTCCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS CCA 90 bp TTCAAGTTCCTGCGCTGGAGTCACCACCCGAGAGGCATCGCCGTCTaGCGTTGGTGTCTGAGCAGAAGCCGCAGGAACCAGCGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: FKFLRWSHHPRGIAV*RWCLSRSRRNQREQ
Trigger: CTGCTCCCGCTGGTTCCTGCGGCTTCTGCTCAGACACCAACGCCAGACGGCGATGCCTCTCGGGTGGTGACTCCAGCGCAGGAACTTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450565.8
CDS CCA 90 bp TGCCAGGTAGGACGGCGGGCAAAGCGCTTCTTCAAGTTCCTGCGCTaGAGTCACCACCCGAGAGGCATCGCCGTCTGGCGTTGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: CQVGRRAKRFFKFLR*SHHPRGIAVWRWCL
Trigger: CAGACACCAACGCCAGACGGCGATGCCTCTCGGGTGGTGACTCCAGCGCAGGAACTTGAAGAAGCGCTTTGCCCGCCGTCCTACCTGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450565.8
CDS CCA 90 bp GCAGGGCCAGCCTCGCTCCGCTACACATGGTCATTCTGCGCAGGATaGGAAAGAGGACACACAGCTGTGAGAACGCCCCTGGCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: AGPASLRYTWSFCAG*ERGHTAVRTPLASH
Trigger: GTGGGAGGCCAGGGGCGTTCTCACAGCTGTGTGTCCTCTTTCCCATCCTGCGCAGAATGACCATGTGTAGCGGAGCGAGGCTGGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS-3UTR CAA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTCCGTCCGAGTGGCGCTaGGAGAGCGGCTCCGCGTCG +
Preference number: 5 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAPSEWR*ESGSAS
Trigger: CGACGCGGAGCCGCTCTCCAAGCGCCACTCGGACGG...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS TCA 90 bp TTCCTCTGGCCTGATCCCGGGGAACCGGAGTCCGGCGGCGGCAGGTaGGCTGTAGACGCTGCTGTGCATGATTATCCCATAGACCAGCAG +
Preference number: 5 (lower is better)
Translates to: FLWPDPGEPESGGGR*AVDAAVHDYPIDQQ
Trigger: CTGCTGGTCTATGGGATAATCATGCACAGCAGCGTCTACAGCTCACCTGCCGCCGCCGGACTCCGGTTCCCCGGGATCAGGCCAGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS GCA 90 bp CTCGTTAAGGATCCCGTGGGCGACATCTCTAACGGGGAGGCAAAGTaGGCGCCCAGGGTCACTGTTTCTGTCCCCAGGTGGCCGCTAGAG +
Preference number: 5 (lower is better)
Translates to: LVKDPVGDISNGEAK*APRVTVSVPRWPLE
Trigger: CTCTAGCGGCCACCTGGGGACAGAAACAGTGACCCTGGGCGCGCACTTTGCCTCCCCGTTAGAGATGTCGCCCACGGGATCCTTAACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581602.1
CDS GCA 90 bp CATAGACCAGCAGGGCCAGCCTCGCTCCGCTACACATGGTCATTCTaGGCAGGATGGGAAAGAGGACACACAGCTGTGAGAACGCCCCTG +
Preference number: 5 (lower is better)
Translates to: HRPAGPASLRYTWSF*AGWERGHTAVRTPL
Trigger: CAGGGGCGTTCTCACAGCTGTGTGTCCTCTTTCCCATCCTGCGCAGAATGACCATGTGTAGCGGAGCGAGGCTGGCCCTGCTGGTCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS-3UTR CAA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTCCCCGGCTCCCTGAGTaGAACAGCACTTGGCGACAG +
Preference number: 5 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSPRLPE*NSTWRQ
Trigger: CTGTCGCCAAGTGCTGTTCAACTCAGGGAGCCGGGG...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS-3UTR CAA 90 bp CATTGTACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGCCGTCCGAGTGGCGCTaGGAGAGCGGCTCCGCGTCG +
Preference number: 5 (lower is better)
Translates to: HCTLHPFPIPSAQSQDHWPSEWR*ESGSAS
Trigger: CGACGCGGAGCCGCTCTCCAAGCGCCACTCGGACGG...CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTCCATTGGGACTGGATTaGCCCTCAGCTTCCCAGACC +
Preference number: 5 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAPLGLD*PSASQT
Trigger: GGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGG...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp ATTCCCTGGCCACTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCCCATTGGGACTGGATTaGCCCTCAGCTTCCCAGACC +
Preference number: 5 (lower is better)
Translates to: IPWPLRKYRKESGLTKPPPLGLD*PSASQT
Trigger: GGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGG...GGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAGTGGCCAGGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp ATTCCCTGGCCACTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCGCATCCCGTGTCACATaGCCTGAGGAGACTGCGGAA +
Preference number: 5 (lower is better)
Translates to: IPWPLRKYRKESGLTKPPASRVT*PEETAE
Trigger: TTCCGCAGTCTCCTCAGGCAATGTGACACGGGATGC...GGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAGTGGCCAGGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTCCAAAGTCAGGACCATaGGGACTGGATTTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSPKSGP*GLDLPS
Trigger: TGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGG...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTAGGGTCTGTTGGAGCTaGCTTACCTCACTCTTGACC +
Preference number: 5 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSRVCWS*LTSLLT
Trigger: GGTCAAGAGTGAGGTAAGCAAGCTCCAACAGACCCT...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp ATTCCCTGGCCACTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCGGTTCTCAGGGTCTGTaGGAGCTTGCTTACCTCACT +
Preference number: 5 (lower is better)
Translates to: IPWPLRKYRKESGLTKPPGSQGL*ELAYLT
Trigger: AGTGAGGTAAGCAAGCTCCAACAGACCCTGAGAACC...GGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAGTGGCCAGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTTTTCTTGACAGCCATTaGTTTCCGGTAGCGGCTGTA +
Preference number: 5 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSFLDSH*FPVAAV
Trigger: TACAGCCGCTACCGGAAACAAATGGCTGTCAAGAAA...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp CTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTTTTCTGTACAGGCATCCCGTGTCACATaGCCTGAGGAGACTGCGGAA +
Preference number: 5 (lower is better)
Translates to: LRKYRKESGLTKPPFSVQASRVT*PEETAE
Trigger: TTCCGCAGTCTCCTCAGGCAATGTGACACGGGATGC...CTGTACAGAAAAGGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTACATCGCCGTCTGGCGTaGGTGTCTGAGCAGAAGCCG +
Preference number: 5 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALHRRLA*VSEQKP
Trigger: CGGCTTCTGCTCAGACACCAACGCCAGACGGCGATG...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450565.8
CDS-3UTR CAA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTGGGGAGAAGCACAATTaGGATCGAGCTGTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAGEKHN*DRAVVL
Trigger: TAAAACAACAGCTCGATCCAAATTGTGCTTCTCCCC...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTGCTATTCGGCGTCCTTaGTTTTTAACCCTTTGTTTA +
Preference number: 5 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSAIRRP*FLTLCL
Trigger: TAAACAAAGGGTTAAAAACAAAGGACGCCGAATAGC...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTGGAGCAGGGCATCATaGTTTATGTACAGTAGCAAA +
Preference number: 5 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAWSRAS*FMYSSK
Trigger: TTTGCTACTGTACATAAACAATGATGCCCTGCTCCA...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp ATTCCCTGGCCACTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTCCAATTGCCCTAATTaGGGGATATTAGATTCCCTG +
Preference number: 5 (lower is better)
Translates to: IPWPLRKYRKESGLTKPPSNCPN*GILDSL
Trigger: CAGGGAATCTAATATCCCCAAATTAGGGCAATTGGA...GGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAGTGGCCAGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp CATTGTACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGCCAAAGTCAGGACCATaGGGACTGGATTTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: HCTLHPFPIPSAQSQDHWPKSGP*GLDLPS
Trigger: TGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGG...CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTCTCTGTTTTCACTATTaGCAATGTGATCTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSALCFHY*QCDLLA
Trigger: TGCCAGGAGATCACATTGCAAATAGTGAAAACAGAG...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTGCTATTCGGCGTCCTTaGTTTTTAACCCTTTGTTTA +
Preference number: 5 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAAIRRP*FLTLCL
Trigger: TAAACAAAGGGTTAAAAACAAAGGACGCCGAATAGC...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTATCCTTGTGCACGCTTaGTATGAACTTCTCTCTATA +
Preference number: 5 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAILVHA*YELLSI
Trigger: TATAGAGAGAAGTTCATACAAAGCGTGCACAAGGAT...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp GTCAGGACCATTGGGACTGGATTTGCCCTCAGCTTCCCAGACCTGGGGCAATCTAAAACACATTGTACTTaGCATCCATTTCCAATACCC +
Preference number: 5 (lower is better)
Translates to: VRTIGTGFALSFPDLGQSKTHCT*HPFPIP
Trigger: GGGTATTGGAAATGGATGCAAAGTACAATGTGTTTT...AGATTGCCCCAGGTCTGGGAAGCTGAGGGCAAATCCAGTCCCAATGGTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp TCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGACTGGATTTGCCCTCAGCTGGAATTAAAGGAAGATaGATCCTATACACAGGACTC +
Preference number: 5 (lower is better)
Translates to: SNTQRPKSGPLGLDLPSAGIKGR*ILYTGL
Trigger: GAGTCCTGTGTATAGGATCAATCTTCCTTTAATTCC...AGCTGAGGGCAAATCCAGTCCCAATGGTCCTGACTTTGGGCGCTGGGTATTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGGCAGAAATATTGGAATaGCCACCCAACCAGGGGGAC +
Preference number: 5 (lower is better)
Translates to: FKRRRKALKLQTASRVTLAEILE*PPNQGD
Trigger: GTCCCCCTGGTTGGGTGGCAATTCCAATATTTCTGC...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGGATTGGCTGGCTGGTTaGTCTGTTGCTGCTCGATCT +
Preference number: 5 (lower is better)
Translates to: FKRRRKALKLQTASRVTLDWLAG*SVAARS
Trigger: AGATCGAGCAGCAACAGACAAACCAGCCAGCCAATC...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp CTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTTTTCTGTACAGGCGAATTTTCAATCCTaGTGCACGCTTTGTATGAAC +
Preference number: 5 (lower is better)
Translates to: LRKYRKESGLTKPPFSVQANFQS*CTLCMN
Trigger: GTTCATACAAAGCGTGCACAAGGATTGAAAATTCGC...CTGTACAGAAAAGGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp CTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTTTTCTGTACAGCTCTGTTTTCACTATTaGCAATGTGATCTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: LRKYRKESGLTKPPFSVQLCFHY*QCDLLA
Trigger: TGCCAGGAGATCACATTGCAAATAGTGAAAACAGAG...CTGTACAGAAAAGGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp CATTGTACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGATCACTGTAAAATGCTaGCAACTAGCCACGGGAACA +
Preference number: 5 (lower is better)
Translates to: HCTLHPFPIPSAQSQDHWITVKC*QLATGT
Trigger: TGTTCCCGTGGCTAGTTGCAAGCATTTTACAGTGAT...CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp TTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTAGCAAATGATTGGCTGGCTGGTTaGTCTGTTGCTGCTCGATCT +
Preference number: 5 (lower is better)
Translates to: LPQNLPGAGHHCLCTVANDWLAG*SVAARS
Trigger: AGATCGAGCAGCAACAGACAAACCAGCCAGCCAATC...ATTTGCTACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp GCTCTGCCTCTTCCAATATACCTCTATGTCCTTCACTTTGTTCCAATTGCCCTACTGAAATTTGGGAGATaGGCTGGCTGGTTTGTCTGT +
Preference number: 5 (lower is better)
Translates to: ALPLPIYLYVLHFVPIALLKFGR*AGWFVC
Trigger: ACAGACAAACCAGCCAGCCAATCTCCCAAATTTCAG...TAGGGCAATTGGAACAAAGTGAAGGACATAGAGGTATATTGGAAGAGGCAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp CTCAGGAAGTACAGAAAAGAGAGCGGTCTAACGAAGCCGCCCTTTTCTGTACAGTACATAAATACATGTTaGGATAGAACACACGAGCGA +
Preference number: 5 (lower is better)
Translates to: LRKYRKESGLTKPPFSVQYINTC*DRTHER
Trigger: TCGCTCGTGTGTTCTATCCAAACATGTATTTATGTA...CTGTACAGAAAAGGGCGGCTTCGTTAGACCGCTCTCTTTTCTGTACTTCCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp CATTGTACTTTGCATCCATTTCCAATACCCAGCGCCCAAAGTCAGGACCATTGGGGAATTAAAGGAAGATaGATCCTATACACAGGACTC +
Preference number: 5 (lower is better)
Translates to: HCTLHPFPIPSAQSQDHWGIKGR*ILYTGL
Trigger: GAGTCCTGTGTATAGGATCAATCTTCCTTTAATTCC...CCAATGGTCCTGACTTTGGGCGCTGGGTATTGGAAATGGATGCAAAGTACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACGCAGAAATATTGGAATaGCCACCCAACCAGGGGGAC +
Preference number: 5 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHAEILE*PPNQGD
Trigger: GTCCCCCTGGTTGGGTGGCAATTCCAATATTTCTGC...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGTCCAATTGCCCTAATTaGGGGATATTAGATTCCCTG +
Preference number: 5 (lower is better)
Translates to: FKRRRKALKLQTASRVTLSNCPN*GILDSL
Trigger: CAGGGAATCTAATATCCCCAAATTAGGGCAATTGGA...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTATGCAAGCTGATGTGTaGCAGCATTGTAGGGCCACT +
Preference number: 5 (lower is better)
Translates to: VAARSDCWVKVLLFIKITMQADV*QHCRAT
Trigger: AGTGGCCCTACAATGCTGCAACACATCAGCTTGCAT...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTTTTCTTGACAGCCATTaGTTTCCGGTAGCGGCTGTA +
Preference number: 5 (lower is better)
Translates to: VAARSDCWVKVLLFIKITFLDSH*FPVAAV
Trigger: TACAGCCGCTACCGGAAACAAATGGCTGTCAAGAAA...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACGCCGCCAAGTATTTCTaGACAGCCATTTGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHAAKYF*TAICFR
Trigger: CCGGAAACAAATGGCTGTCAAGAAATACTTGGCGGC...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTGAAAACGACTTTTCATaGCGTCAGGGCTGTATACAC +
Preference number: 5 (lower is better)
Translates to: VAARSDCWVKVLLFIKITENDFS*RQGCIH
Trigger: GTGTATACAGCCCTGACGCAATGAAAAGTCGTTTTC...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp TTTAAAAGGCGAAGAAAGGCACTAAAGCTGCAAACTGCATCCCGTGTCACATTGTACATAAATACATGTTaGGATAGAACACACGAGCGA +
Preference number: 5 (lower is better)
Translates to: FKRRRKALKLQTASRVTLYINTC*DRTHER
Trigger: TCGCTCGTGTGTTCTATCCAAACATGTATTTATGTA...CAATGTGACACGGGATGCAGTTTGCAGCTTTAGTGCCTTTCTTCGCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTATCACTGTAAAATGCTaGCAACTAGCCACGGGAACA +
Preference number: 5 (lower is better)
Translates to: VAARSDCWVKVLLFIKITITVKC*QLATGT
Trigger: TGTTCCCGTGGCTAGTTGCAAGCATTTTACAGTGAT...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACGCGCCCTGCCACTTCTaGCTTGCTATAGTTAGAAAA +
Preference number: 5 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHAPCHF*LAIVRK
Trigger: TTTTCTAACTATAGCAAGCAAGAAGTGGCAGGGCGC...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS-3UTR CAA 90 bp AGTATACAAAAGATTAAACTGGGTGATCACTGTAAAATGCTTGCAACTAGCCACGAAAACGACTTTTCATaGCGTCAGGGCTGTATACAC +
Preference number: 5 (lower is better)
Translates to: SIQKIKLGDHCKMLATSHENDFS*RQGCIH
Trigger: GTGTATACAGCCCTGACGCAATGAAAAGTCGTTTTC...GTGGCTAGTTGCAAGCATTTTACAGTGATCACCCAGTTTAATCTTTTGTATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp CATATCTTTACCTCAAAATCTCCCTGGAGCAGGGCATCATTGTTTATGTACAGTATCCTTGTGCACGCTTaGTATGAACTTCTCTCTATA +
Preference number: 5 (lower is better)
Translates to: HIFTSKSPWSRASLFMYSILVHA*YELLSI
Trigger: TATAGAGAGAAGTTCATACAAAGCGTGCACAAGGAT...ACTGTACATAAACAATGATGCCCTGCTCCAGGGAGATTTTGAGGTAAAGATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTTGGAGCAGGGCATCATaGTTTATGTACAGTAGCAAA +
Preference number: 5 (lower is better)
Translates to: VAARSDCWVKVLLFIKITWSRAS*FMYSSK
Trigger: TTTGCTACTGTACATAAACAATGATGCCCTGCTCCA...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS-3UTR CAA 90 bp GTTGCTGCTCGATCTGATTGCTGGGTGAAGGTTCTTTTGTTTATAAAGATTACTAAAACACATTGTACTTaGCATCCATTTCCAATACCC +
Preference number: 5 (lower is better)
Translates to: VAARSDCWVKVLLFIKITKTHCT*HPFPIP
Trigger: GGGTATTGGAAATGGATGCAAAGTACAATGTGTTTT...AGTAATCTTTATAAACAAAAGAACCTTCACCCAGCAATCAGATCGAGCAGCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS TCA 72 bp GGGGGAGGGACGGAGCGAAGCCCCGGCTCCCTGAGTTaGACAGCACTTGGCGACAGCCGGTGCGCGCCCTGC +
Preference number: 6 (lower is better)
Translates to: GGGTERSPGSLS*TALGDSRCAPC
Trigger: GCAGGGCGCGCACCGGCTGTCGCCAAGTGCTGTTCAACTCAGGGAGCCGGGGCTTCGCTCCGTCCCTCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS CAA 72 bp CGGGGGAGGGACGGAGCGAAGCCCCGGCTCCCTGAGTaGAACAGCACTTGGCGACAGCCGGTGCGCGCCCTG +
Preference number: 6 (lower is better)
Translates to: RGRDGAKPRLPE*NSTWRQPVRAL
Trigger: CAGGGCGCGCACCGGCTGTCGCCAAGTGCTGTTCAACTCAGGGAGCCGGGGCTTCGCTCCGTCCCTCCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS TCA 72 bp AAGCCGGGGGAGGGACGGAGCGAAGCCCCGGCTCCCTaGGTTGAACAGCACTTGGCGACAGCCGGTGCGCGC +
Preference number: 6 (lower is better)
Translates to: KPGEGRSEAPAP*VEQHLATAGAR
Trigger: GCGCGCACCGGCTGTCGCCAAGTGCTGTTCAACTCAGGGAGCCGGGGCTTCGCTCCGTCCCTCCCCCGGCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS TCA 72 bp TTGTTGGGCGCGCGCCCCCTCGGCGGCCGGGGAGGCTaGCAGGGAAACCTCCAGAGGCCCAGAACTCGCCAA +
Preference number: 6 (lower is better)
Translates to: LLGARPLGGRGG*QGNLQRPRTRQ
Trigger: TTGGCGAGTTCTGGGCCTCTGGAGGTTTCCCTGTCAGCCTCCCCGGCCGCCGAGGGGGCGCGCGCCCAACAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581602.1
CDS CCA 72 bp AAGTGCGCGCCCAGGGTCACTGTTTCTGTCCCCAGGTaGCCGCTAGAGACCCCCTTGTTGGGCGCGCGCCCC +
Preference number: 6 (lower is better)
Translates to: KCAPRVTVSVPR*PLETPLLGARP
Trigger: GGGGCGCGCGCCCAACAAGGGGGTCTCTAGCGGCCACCTGGGGACAGAAACAGTGACCCTGGGCGCGCACTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581602.1
CDS CAA 90 bp TCTGGAAGCCGGGGGAGGGACGGAGCGAAGCCCCGGCTCCCTGAGTaGAACAGCACTTGGCGACAGCCGGTGCGCGCCCTGCCACTTCTT +
Preference number: 6 (lower is better)
Translates to: SGSRGRDGAKPRLPE*NSTWRQPVRALPLL
Trigger: AAGAAGTGGCAGGGCGCGCACCGGCTGTCGCCAAGTGCTGTTCAACTCAGGGAGCCGGGGCTTCGCTCCGTCCCTCCCCCGGCTTCCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS CCA 72 bp GTCCTCGCCGTACGCCTCTTCCTCTGGCCTGCGGGGTaGCCGGGGACAGAAGGTGTGGTCAGTGCAAGTTCC +
Preference number: 6 (lower is better)
Translates to: VLAVRLFLWPAG*PGTEGVVSASS
Trigger: GGAACTTGCACTGACCACACCTTCTGTCCCCGGCCACCCCGCAGGCCAGAGGAAGAGGCGTACGGCGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269200.5
CDS CCA 72 bp GGAGCGAAGCCCCGGCTCCCTGAGTTGAACAGCACTTaGCGACAGCCGGTGCGCGCCCTGCCACTTCTTGCT +
Preference number: 6 (lower is better)
Translates to: GAKPRLPELNST*RQPVRALPLLA
Trigger: AGCAAGAAGTGGCAGGGCGCGCACCGGCTGTCGCCAAGTGCTGTTCAACTCAGGGAGCCGGGGCTTCGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579794.1
CDS CCA 72 bp CTGCGCTGGAGTCACCACCCGAGAGGCATCGCCGTCTaGCGTTGGTGTCTGAGCAGAAGCCGCAGGAACCAG +
Preference number: 6 (lower is better)
Translates to: LRWSHHPRGIAV*RWCLSRSRRNQ
Trigger: CTGGTTCCTGCGGCTTCTGCTCAGACACCAACGCCAGACGGCGATGCCTCTCGGGTGGTGACTCCAGCGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450565.8
CDS CCA 72 bp GGACGGCGGGCAAAGCGCTTCTTCAAGTTCCTGCGCTaGAGTCACCACCCGAGAGGCATCGCCGTCTGGCGT +
Preference number: 6 (lower is better)
Translates to: GRRAKRFFKFLR*SHHPRGIAVWR
Trigger: ACGCCAGACGGCGATGCCTCTCGGGTGGTGACTCCAGCGCAGGAACTTGAAGAAGCGCTTTGCCCGCCGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450565.8
CDS TCA 72 bp CGGCGGCGGCAGGTGAGCTGTAGACGCTGCTGTGCATaGTTATCCCATAGACCAGCAGGGCCAGCCTCGCTC +
Preference number: 6 (lower is better)
Translates to: RRRQVSCRRCCA*LSHRPAGPASL
Trigger: GAGCGAGGCTGGCCCTGCTGGTCTATGGGATAATCATGCACAGCAGCGTCTACAGCTCACCTGCCGCCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS GCA 72 bp GATCCCGTGGGCGACATCTCTAACGGGGAGGCAAAGTaGGCGCCCAGGGTCACTGTTTCTGTCCCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: DPVGDISNGEAK*APRVTVSVPRW
Trigger: CCACCTGGGGACAGAAACAGTGACCCTGGGCGCGCACTTTGCCTCCCCGTTAGAGATGTCGCCCACGGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581602.1
CDS TCA 72 bp CCTGATCCCGGGGAACCGGAGTCCGGCGGCGGCAGGTaGGCTGTAGACGCTGCTGTGCATGATTATCCCATA +
Preference number: 6 (lower is better)
Translates to: PDPGEPESGGGR*AVDAAVHDYPI
Trigger: TATGGGATAATCATGCACAGCAGCGTCTACAGCTCACCTGCCGCCGCCGGACTCCGGTTCCCCGGGATCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450565.8
ENST00000579794.1
CDS TCA 72 bp CAGCCATTTGTTTCCGGTAGCGGCTGTAGCTGTCCGTaGAGATCCCGTCCGAGTGGCGCTTGGAGAGCGGCT +
Preference number: 6 (lower is better)
Translates to: QPFVSGSGCSCP*RSRPSGAWRAA
Trigger: AGCCGCTCTCCAAGCGCCACTCGGACGGGATCTTCACGGACAGCTACAGCCGCTACCGGAAACAAATGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269200.5
ENST00000450565.8
ENST00000579794.1
ENST00000581602.1
CDS GCA 72 bp GGTCATTCCTTCAACTCCTCCCGCTGCCAGGAGAGCTaGCAGGTAGGACGGCGGGCAAAGCGCTTCTTCAAG +
Preference number: 6 (lower is better)
Translates to: GHSFNSSRCQES*QVGRRAKRFFK
Trigger: CTTGAAGAAGCGCTTTGCCCGCCGTCCTACCTGGCAGCTCTCCTGGCAGCGGGAGGAGTTGAAGGAATGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450565.8
CDS TCA 72 bp TATACCTCTTCCCTAGGACGGCCGCCAAGTATTTCTTaGCAGCCATTTGTTTCCGGTAGCGGCTGTAGCTGT +
Preference number: 6 (lower is better)
Translates to: YTSSLGRPPSIS*QPFVSGSGCSC
Trigger: ACAGCTACAGCCGCTACCGGAAACAAATGGCTGTCAAGAAATACTTGGCGGCCGTCCTAGGGAAGAGGTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269200.5
ENST00000450565.8
ENST00000579794.1
ENST00000581602.1